Citrus Sinensis ID: 043099

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAATN
Secondary Structure (PSIPRED)
ccEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccEEcccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccHcHccHHHEcccccccEEEEEEEEEEccccHHHHHcccEEccccHEHHHEEEEEEHcccccccccccccHHHHHHHHHHHHccHHHHccHHHccccccccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mvahvsdfgiskllgegdgsmtqTMTMATIgymapeygsngivsikcDVYSYGVLLMEAFtkkkptnemftgktnlrnwvseslpdrltevvdtnlvreeQNFSAKLDCLLSIMYLALDccmespeqriCMTDAAAKLKKIREKFLDDGAATN
Flexible Loop (DISEMBL)
mvahvsdfgiskllgegdgsmTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFtkkkptnemftgktnlrnwvseslpDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRekflddgaatn
Low Complexity Region (SEG)
MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAATN
Disordered region (IsUnstruct)
**********************QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI************
Disordered Region (DISOPRED)
MVAHVSDFGISKLL*************ATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF*DD*****
Disordered Region (DISEMBL)
MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAATN
Disordered Region (DISPRO)
*VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAATN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	no	no	0.993	0.150	0.379	5e-26
Q9SD62	1025	Putative receptor-like pr	no	no	0.960	0.143	0.384	4e-23
C0LGT6	1031	LRR receptor-like serine/	no	no	0.888	0.131	0.364	8e-19
Q9LHP4	1141	Receptor-like protein kin	no	no	0.888	0.119	0.347	2e-18
P93194	1109	Receptor-like protein kin	N/A	no	0.888	0.122	0.352	2e-17
Q9SYM9	355	Receptor-like serine/thre	no	no	0.862	0.371	0.366	2e-16
O22476	1196	Protein BRASSINOSTEROID I	no	no	0.895	0.114	0.342	2e-16
Q9SSL9	1123	Leucine-rich repeat recep	no	no	0.888	0.121	0.321	9e-16
Q8GUQ5	1207	Brassinosteroid LRR recep	N/A	no	0.895	0.113	0.342	1e-15
Q8L899	1207	Systemin receptor SR160 O	N/A	no	0.895	0.113	0.342	1e-15

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 6/158 (3%)

Query: 1    MVAHVSDFGISKLLGEGD-----GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
            + AHVSDFG+++LL + D       ++      TIGY APEYG  G  SI  DVYS+G+L
Sbjct: 851  LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query: 56   LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFS-AKLDCLLSIM 114
            L+E FT K+PTNE+F G   L ++   +LP+R+ ++VD +++          ++CL  + 
Sbjct: 911  LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVECLTMVF 970

Query: 115  YLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAAT 152
             + L CC ESP  R+  +    +L  IRE+F      T
Sbjct: 971  EVGLRCCEESPMNRLATSIVVKELISIRERFFKASRTT 1008

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 9/156 (5%)

Query: 1    MVAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
            + AHVSDFG+++LL + D        +      TIGY APEYG  G  SI  DVYS+G++
Sbjct: 868  LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query: 56   LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLT-EVVDTNLVR--EEQNFSAKLDCLLS 112
            L+E FT K+PTN++F     L ++   +L  R   ++ D  ++R    Q+F+  ++CL  
Sbjct: 928  LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNM-VECLTL 986

Query: 113  IMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD 148
            +  + + C  ESP  RI M +A +KL  IRE F  D
Sbjct: 987  VFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 15/151 (9%)

Query: 1    MVAHVSDFGISKLLGEGD-----GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
            + AHVSDFG+++LL + D        +      TIGY APEYG  G  SI+ DVYS+G+L
Sbjct: 861  LTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGIL 920

Query: 56   LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
            L+E F+ KKPT+E F G  NL ++ ++S+    T    +N + E          L  ++ 
Sbjct: 921  LLEMFSGKKPTDESFAGDYNLHSY-TKSILSGCTSSGGSNAIDE---------GLRLVLQ 970

Query: 116  LALDCCMESPEQRICMTDAAAKLKKIREKFL 146
            + + C  E P  R+   +A  +L  IR KF 
Sbjct: 971  VGIKCSEEYPRDRMRTDEAVRELISIRSKFF 1001

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 83/141 (58%), Gaps = 5/141 (3%)

Query: 4    HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            +++DFG++KL+ EGD          + GY+APEYG +  ++ K DVYSYGV+++E  T K
Sbjct: 934  YIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 993

Query: 64   KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            +P +       +L +WV ++      EV+D+ L    +   A+ D ++ ++  AL C   
Sbjct: 994  QPIDPTVPEGIHLVDWVRQNRGS--LEVLDSTLRSRTE---AEADEMMQVLGTALLCVNS 1048

Query: 124  SPEQRICMTDAAAKLKKIREK 144
            SP++R  M D AA LK+I+++
Sbjct: 1049 SPDERPTMKDVAAMLKEIKQE 1069

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 3/139 (2%)

Query: 4    HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            H+SDFGI+KLL +   S+       TIGYMAPE     + S + DVYSYGV+L+E  T+K
Sbjct: 957  HISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRK 1016

Query: 64   KPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
            K  +  F G+T++  WV    +    + ++VD +L+ E  + S+ ++ +   + LAL C 
Sbjct: 1017 KALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELID-SSVMEQVTEALSLALRCA 1075

Query: 122  MESPEQRICMTDAAAKLKK 140
             +  ++R  M D   +L +
Sbjct: 1076 EKEVDKRPTMRDVVKQLTR 1094

Possible role in short-day photoperiod floral induction.

Ipomoea nil (taxid: 35883)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYM9|Y1853_ARATH Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 18/150 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           M A VSDFG++ L+ E D +   T    T GY+APEY   G  ++K DVYS+GV+L+E  
Sbjct: 209 MEARVSDFGLATLM-EPDKTHVSTFVAGTFGYLAPEYFDTGKATMKGDVYSFGVVLLELL 267

Query: 61  TKKKPT-NEMFTGKTNLRNWVSESLPDRLTEVVDTNLVR-------EEQNFSAKLDCLLS 112
           T +KPT +E F   T L  WV   + D+  EVV  N +R       EE N          
Sbjct: 268 TGRKPTDDEFFEEGTKLVTWVKGVVRDQREEVVIDNRLRGSSVQENEEMN---------D 318

Query: 113 IMYLALDCCMESPEQRICMTDAAAKLKKIR 142
           +  +A+ C    P  R  MT+    L+ I+
Sbjct: 319 VFGIAMMCLEPEPAIRPAMTEVVKLLEYIK 348

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 3    AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
            A VSDFG+++L+   D  ++ +    T GY+ PEY  +   S K DVYSYGV+L+E  T 
Sbjct: 1023 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1082

Query: 63   KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
            K+PT+    G  NL  WV +    R+++V D  L++E+     +   LL  + +A+ C  
Sbjct: 1083 KRPTDSPDFGDNNLVGWVKQHAKLRISDVFDPELMKEDPALEIE---LLQHLKVAVACLD 1139

Query: 123  ESPEQRICMTDAAAKLKKIR 142
            +   +R  M    A  K+I+
Sbjct: 1140 DRAWRRPTMVQVMAMFKEIQ 1159

Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. Binds brassinolide, and less effectively castasterone, but not 2,3,22,23-O-tetramethylbrassinolide or ecdysone. May be involved in a feedback regulation of brassinosteroid biosynthesis. Phosphorylates BRI1-associated receptor kinase 1 (BAK1), Transthyretin-Like protein (TTL) and SERK1 on 'Ser-299' and 'Thr-462' in vitro. May have a guanylyl cyclase activity.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSL9|PEPR1_ARATH Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 10/146 (6%)

Query: 4    HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            H+ DFG+++LL   D +++      T GY+APE     +   + DVYSYGV+L+E  T+K
Sbjct: 969  HIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRK 1026

Query: 64   KPTNEMFTGKTNLRNWVSESLP-------DRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
            +  ++ F   T++ +WV  +L        D +T +VD  LV E  + S + + ++ +  L
Sbjct: 1027 RAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLR-EQVMQVTEL 1085

Query: 117  ALDCCMESPEQRICMTDAAAKLKKIR 142
            AL C  + P  R  M DA   L+ ++
Sbjct: 1086 ALSCTQQDPAMRPTMRDAVKLLEDVK 1111

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 3/140 (2%)

Query: 3    AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
            A VSDFG+++L+   D  ++ +    T GY+ PEY  +   S K DVYSYGV+L+E  T 
Sbjct: 1028 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1087

Query: 63   KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
            K+PT+    G  NL  WV      ++T+V D  L++E+ +   +   LL  + +A  C  
Sbjct: 1088 KQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIE---LLQHLKVACACLD 1144

Query: 123  ESPEQRICMTDAAAKLKKIR 142
            +   +R  M    A  K+I+
Sbjct: 1145 DRHWKRPTMIQVMAMFKEIQ 1164

Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 3/140 (2%)

Query: 3    AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
            A VSDFG+++L+   D  ++ +    T GY+ PEY  +   S K DVYSYGV+L+E  T 
Sbjct: 1028 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG 1087

Query: 63   KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
            K+PT+    G  NL  WV      ++T+V D  L++E+ +   +   LL  + +A  C  
Sbjct: 1088 KQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIE---LLQHLKVACACLD 1144

Query: 123  ESPEQRICMTDAAAKLKKIR 142
            +   +R  M    A  K+I+
Sbjct: 1145 DRHWKRPTMIQVMAMFKEIQ 1164

Receptor with a serine/threonine-protein kinase activity. Involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. May also regulate, in response to brassinosteroid binding, a signaling cascade involved in plant development.

Solanum peruvianum (taxid: 4082)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
224116832	1061	predicted protein [Populus trichocarpa]	0.960	0.138	0.621	2e-49
255572272	1089	serine-threonine protein kinase, plant-t	0.960	0.134	0.590	9e-43
359485176	1160	PREDICTED: probable LRR receptor-like se	0.941	0.124	0.619	5e-42
359485451	1454	PREDICTED: LRR receptor-like serine/thre	0.941	0.099	0.598	6e-42
297740829	1892	unnamed protein product [Vitis vinifera]	0.941	0.076	0.612	1e-41
359483685	1046	PREDICTED: LRR receptor-like serine/thre	0.941	0.137	0.612	1e-41
359483677	1229	PREDICTED: LRR receptor-like serine/thre	0.941	0.117	0.598	1e-41
302143440	929	unnamed protein product [Vitis vinifera]	0.941	0.155	0.598	1e-41
147852480	1229	hypothetical protein VITISV_039533 [Viti	0.941	0.117	0.598	3e-41
147769371	1241	hypothetical protein VITISV_010511 [Viti	0.941	0.116	0.598	4e-41

>gi|224116832|ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1| predicted protein [Populus trichocarpa]

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/148 (62%), Positives = 119/148 (80%), Gaps = 1/148 (0%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHVSDFGIS+LLGEGD ++TQT+T+ATIGYMAPEYG  GIVS+K DVYSYG+ LME F
Sbjct: 906  MVAHVSDFGISRLLGEGD-AVTQTLTLATIGYMAPEYGLEGIVSVKGDVYSYGIFLMETF 964

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
            T+KKPT++MF G+ +L+NWV +SLP  +TEV+D NL+ EE++F AK DC+ SI+ LAL+C
Sbjct: 965  TRKKPTDDMFGGEMSLKNWVKQSLPKAITEVIDANLLIEEEHFVAKKDCITSILNLALEC 1024

Query: 121  CMESPEQRICMTDAAAKLKKIREKFLDD 148
              + P +RICM D    L+KI+ K+  D
Sbjct: 1025 SADLPGERICMRDVLPALEKIKLKYKKD 1052

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572272|ref|XP_002527075.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533580|gb|EEF35319.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 88/149 (59%), Positives = 115/149 (77%), Gaps = 2/149 (1%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVA ++DFGISKLLGE +GS+ QTMT+ATIGYMAPEYGS GIVS++ DVYSYGVLLME F
Sbjct: 937  MVAFLADFGISKLLGE-EGSVMQTMTLATIGYMAPEYGSEGIVSVRGDVYSYGVLLMETF 995

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVR-EEQNFSAKLDCLLSIMYLALD 119
            T+KKPT++MFT + +L++WV +SL   +T+V+D NL+  EE + +AK DC++SI+ LAL 
Sbjct: 996  TQKKPTDKMFTEQLSLKSWVEQSLSCEVTQVIDANLLGIEEDHLAAKKDCIVSILKLALQ 1055

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFLDD 148
            C  + P  RI M      L+KI+ KFL D
Sbjct: 1056 CSADLPHDRIDMKHVVTTLQKIKTKFLRD 1084

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485176|ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 91/147 (61%), Positives = 108/147 (73%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVA + DFGISKLL E + SM QT T+ TIGYMAPEYGS GIVS + DVYSYG+++ME F
Sbjct: 1014 MVARLGDFGISKLLTETE-SMEQTRTLGTIGYMAPEYGSEGIVSTRGDVYSYGIMMMETF 1072

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKPT+EMF G+  LR+WV ESL  R+ EVVD NLV RE+Q+F  K  CL SIM LAL+
Sbjct: 1073 ARKKPTDEMFGGEVTLRSWV-ESLAGRVMEVVDGNLVRREDQHFGIKESCLRSIMALALE 1131

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  ESP  RI M +   +LKKIR K L
Sbjct: 1132 CTTESPRDRIDMKEVVVRLKKIRIKLL 1158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485451|ref|XP_002276944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 110/147 (74%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV DFGI++LL E + SM QT T+ TIGYMAPEYGS+GIVS K DV+SYG++LME F
Sbjct: 1309 MVAHVGDFGIARLLTETE-SMQQTKTLGTIGYMAPEYGSDGIVSTKGDVFSYGIMLMEVF 1367

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKP +EMF G   L++WV ESL D + EVVD NL+ RE+++F+ KL CL SIM LAL 
Sbjct: 1368 ARKKPMDEMFNGDLTLKSWV-ESLADSMIEVVDANLLRREDEDFATKLSCLSSIMALALA 1426

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+RI M D    LKKI+ + L
Sbjct: 1427 CTTDSPEERIDMKDVVVGLKKIKIELL 1453

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740829|emb|CBI31011.3| unnamed protein product [Vitis vinifera]

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/147 (61%), Positives = 111/147 (75%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV+DFGI+KLL E + SM QT T++TIGYMAPE+GS GIVS K DVYSYG+LLME F
Sbjct: 1747 MVAHVADFGIAKLLTETE-SMQQTKTLSTIGYMAPEHGSAGIVSTKSDVYSYGILLMEVF 1805

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKP +EMFTG   L+ WV ESL + + +VVD NL+ RE+++ + KL CL SIM LAL 
Sbjct: 1806 ARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSIMALALA 1864

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+RI M DA  +LKK R K L
Sbjct: 1865 CTTDSPEERIDMKDAVVELKKSRIKLL 1891

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483685|ref|XP_002263372.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR-like [Vitis vinifera]

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/147 (61%), Positives = 111/147 (75%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV+DFGI+KLL E + SM QT T++TIGYMAPE+GS GIVS K DVYSYG+LLME F
Sbjct: 901  MVAHVADFGIAKLLTETE-SMQQTKTLSTIGYMAPEHGSAGIVSTKSDVYSYGILLMEVF 959

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKP +EMFTG   L+ WV ESL + + +VVD NL+ RE+++ + KL CL SIM LAL 
Sbjct: 960  ARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSIMALALA 1018

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+RI M DA  +LKK R K L
Sbjct: 1019 CTTDSPEERIDMKDAVVELKKSRIKLL 1045

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483677|ref|XP_003633000.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 112/147 (76%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV+DFGI+KLL + + SM QT T+ TIGYMAPE+GS+GIVS K DVYSYG+LLME F
Sbjct: 1084 MVAHVADFGITKLLTKTE-SMQQTKTLGTIGYMAPEHGSDGIVSTKSDVYSYGILLMEVF 1142

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
            ++KKP +EMFTG   L+ WV ESL + + +VVD NL+ RE+++ + KL CL SIM LAL 
Sbjct: 1143 SRKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDANLLRREDEDLATKLSCLSSIMALALA 1201

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+R+ M DA  +LKK R K L
Sbjct: 1202 CTTDSPEERLNMKDAVVELKKSRMKLL 1228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143440|emb|CBI22001.3| unnamed protein product [Vitis vinifera]

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 110/147 (74%), Gaps = 3/147 (2%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           MVAHV DFGI++LL E + SM QT T+ TIGYMAPEYGS+GIVS K DV+SYG++LME F
Sbjct: 784 MVAHVGDFGIARLLTETE-SMQQTKTLGTIGYMAPEYGSDGIVSTKGDVFSYGIMLMEVF 842

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
            +KKP +EMF G   L++WV ESL D + EVVD NL+ RE+++F+ KL CL SIM LAL 
Sbjct: 843 ARKKPMDEMFNGDLTLKSWV-ESLADSMIEVVDANLLRREDEDFATKLSCLSSIMALALA 901

Query: 120 CCMESPEQRICMTDAAAKLKKIREKFL 146
           C  +SPE+RI M D    LKKI+ + L
Sbjct: 902 CTTDSPEERIDMKDVVVGLKKIKIELL 928

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147852480|emb|CAN78527.1| hypothetical protein VITISV_039533 [Vitis vinifera]

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 111/147 (75%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV+DFGI+KLL + + SM QT T+ TIGYMAPE+GS+GIVS K DVYSYG+LLME F
Sbjct: 1084 MVAHVADFGITKLLTKTE-SMQQTKTLGTIGYMAPEHGSDGIVSTKSDVYSYGILLMEVF 1142

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKP +EMFTG   L+ WV ESL + + +VVD NL+ RE+++ + KL CL SIM LAL 
Sbjct: 1143 ARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSIMALALA 1201

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+R+ M DA  +LKK R K L
Sbjct: 1202 CTNDSPEERLDMKDAVVELKKSRMKLL 1228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769371|emb|CAN72496.1| hypothetical protein VITISV_010511 [Vitis vinifera]

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 88/147 (59%), Positives = 111/147 (75%), Gaps = 3/147 (2%)

Query: 1    MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            MVAHV+DFGI+KLL + + SM QT T+ TIGYMAPE+GS+GIVS K DVYSYG+LLME F
Sbjct: 1096 MVAHVTDFGIAKLLTKTE-SMQQTKTLGTIGYMAPEHGSDGIVSTKSDVYSYGILLMEVF 1154

Query: 61   TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV-REEQNFSAKLDCLLSIMYLALD 119
             +KKP +EMFTG   L+ WV ESL + + +VVD NL+ RE+++ + KL CL SIM LAL 
Sbjct: 1155 ARKKPMDEMFTGDLTLKTWV-ESLSNSVIQVVDVNLLRREDEDLATKLSCLSSIMALALA 1213

Query: 120  CCMESPEQRICMTDAAAKLKKIREKFL 146
            C  +SPE+R+ M DA  +LKK R K L
Sbjct: 1214 CTNDSPEERLDMKDAVVELKKSRMKLL 1240

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.947	0.143	0.410	4.5e-25
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.993	0.150	0.379	6.8e-24
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.947	0.143	0.397	8e-23
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.960	0.143	0.384	2e-21
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.934	0.139	0.378	8e-20
TAIR|locus:2085949	1141	AT3G24240 [Arabidopsis thalian	0.882	0.118	0.359	3.4e-17
UNIPROTKB|P93194	1109	INRPK1 "Receptor-like protein	0.888	0.122	0.352	1.1e-16
TAIR|locus:2132168	725	AT4G02010 [Arabidopsis thalian	0.882	0.186	0.377	1.2e-16
TAIR|locus:2168907	966	XIP1 "XYLEM INTERMIXED WITH PH	0.836	0.132	0.375	1.5e-16
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.882	0.130	0.38	1.6e-16

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 4.5e-25, P = 4.5e-25
 Identities = 62/151 (41%), Positives = 92/151 (60%)

Query:     1 MVAHVSDFGISKLLGEGD-----GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
             + AHVSDFG+++LL + D       ++      TIGY APEYG  G  SI  DVYS+GVL
Sbjct:   850 LTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 909

Query:    56 LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAK-LDCLLSIM 114
             ++E FT K+PTNE+F G   L ++   +LP+R+ ++ D +++          L+CL  I+
Sbjct:   910 VLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGFPVLECLKGIL 969

Query:   115 YLALDCCMESPEQRICMTDAAAKLKKIREKF 145
              + L CC ESP  R+  ++AA +L  IRE+F
Sbjct:   970 DVGLRCCEESPLNRLATSEAAKELISIRERF 1000

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 60/158 (37%), Positives = 90/158 (56%)

Query:     1 MVAHVSDFGISKLLGEGD-----GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
             + AHVSDFG+++LL + D       ++      TIGY APEYG  G  SI  DVYS+G+L
Sbjct:   851 LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query:    56 LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL-DCLLSIM 114
             L+E FT K+PTNE+F G   L ++   +LP+R+ ++VD +++         + +CL  + 
Sbjct:   911 LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVECLTMVF 970

Query:   115 YLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAAT 152
              + L CC ESP  R+  +    +L  IRE+F      T
Sbjct:   971 EVGLRCCEESPMNRLATSIVVKELISIRERFFKASRTT 1008

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 8.0e-23, P = 8.0e-23
 Identities = 60/151 (39%), Positives = 91/151 (60%)

Query:     1 MVAHVSDFGISKLLGEGDG-SMTQTMTMA----TIGYMAPEYGSNGIVSIKCDVYSYGVL 55
             + AHVSDFG+++LL + D  S    ++ A    TIGY APEYG  G  SI  DVYS+GVL
Sbjct:   852 LTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 911

Query:    56 LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL-DCLLSIM 114
             L+E FT K+PT+E+F G   L ++   +LP+++ E+ D  ++        +  +CL  ++
Sbjct:   912 LLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGFRTAECLTLVL 971

Query:   115 YLALDCCMESPEQRICMTDAAAKLKKIREKF 145
              + L CC E P  R+  ++ A +L  IRE+F
Sbjct:   972 EVGLRCCEEYPTNRLATSEVAKELISIRERF 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 60/156 (38%), Positives = 89/156 (57%)

Query:     1 MVAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
             + AHVSDFG+++LL + D        +      TIGY APEYG  G  SI  DVYS+G++
Sbjct:   868 LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query:    56 LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLT-EVVDTNLVREE--QNFSAKLDCLLS 112
             L+E FT K+PTN++F     L ++   +L  R   ++ D  ++R    Q+F+  ++CL  
Sbjct:   928 LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNM-VECLTL 986

Query:   113 IMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD 148
             +  + + C  ESP  RI M +A +KL  IRE F  D
Sbjct:   987 VFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 248 (92.4 bits), Expect = 8.0e-20, P = 8.0e-20
 Identities = 59/156 (37%), Positives = 87/156 (55%)

Query:     1 MVAHVSDFGISKLLGEGDGSMTQ-TMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
             MVAHV DFG++++L +G   + Q T +M    TIGY APEYG   I S   D+YSYG+L+
Sbjct:   854 MVAHVGDFGLARILVDGTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIYSYGILV 913

Query:    57 MEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNF--SAK-------L 107
             +E  T K+PT+  F     LR +V   L  R+T+VVDT L+ + +N+  S          
Sbjct:   914 LEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNSTNNSPCRRIT 973

Query:   108 DCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE 143
             +C++ ++ L L C  E P  R    D   +L  I++
Sbjct:   974 ECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQ 1009

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 3.4e-17, P = 3.4e-17
 Identities = 51/142 (35%), Positives = 86/142 (60%)

Query:     4 HVSDFGISKLLGEGD-GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
             +++DFG++KL+ EGD G  + T+   + GY+APEYG +  ++ K DVYSYGV+++E  T 
Sbjct:   934 YIADFGLAKLVDEGDIGRCSNTVA-GSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTG 992

Query:    63 KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
             K+P +       +L +WV ++      EV+D+ L        A+ D ++ ++  AL C  
Sbjct:   993 KQPIDPTVPEGIHLVDWVRQNRGS--LEVLDSTL---RSRTEAEADEMMQVLGTALLCVN 1047

Query:   123 ESPEQRICMTDAAAKLKKIREK 144
              SP++R  M D AA LK+I+++
Sbjct:  1048 SSPDERPTMKDVAAMLKEIKQE 1069

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|P93194 INRPK1 "Receptor-like protein kinase" [Ipomoea nil (taxid:35883)]

 Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 49/139 (35%), Positives = 79/139 (56%)

Query:     4 HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
             H+SDFGI+KLL +   S+       TIGYMAPE     + S + DVYSYGV+L+E  T+K
Sbjct:   957 HISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRK 1016

Query:    64 KPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
             K  +  F G+T++  WV    +    + ++VD +L+ +E   S+ ++ +   + LAL C 
Sbjct:  1017 KALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLL-DELIDSSVMEQVTEALSLALRCA 1075

Query:   122 MESPEQRICMTDAAAKLKK 140
              +  ++R  M D   +L +
Sbjct:  1076 EKEVDKRPTMRDVVKQLTR 1094

GO:0005524 "ATP binding" evidence=NAS

GO:0005576 "extracellular region" evidence=NAS

GO:0005886 "plasma membrane" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0019199 "transmembrane receptor protein kinase activity" evidence=NAS

TAIR|locus:2132168 AT4G02010 [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 54/143 (37%), Positives = 76/143 (53%)

Query:     3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
             A V+DFG++K   EG G+   T  M T GY+APEY   G + +K DVYSYGV+L+E  T 
Sbjct:   522 AKVADFGLAKQAPEGRGNHLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTG 581

Query:    63 KKPTN-EMFTGKTNLRNWVSESL--PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
             +KP +    +G+ NL  W    L   DRL E+VD+ L   E  +  K D  + +  +A  
Sbjct:   582 RKPVDMSQPSGQENLVTWTRPVLRDKDRLEELVDSRL---EGKYP-KED-FIRVCTIAAA 636

Query:   120 CCMESPEQRICMTDAAAKLKKIR 142
             C      QR  M +    LK ++
Sbjct:   637 CVAPEASQRPTMGEVVQSLKMVQ 659

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2168907 XIP1 "XYLEM INTERMIXED WITH PHLOEM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 51/136 (37%), Positives = 74/136 (54%)

Query:     5 VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
             V+DFGI+K+L       T T+   T GY+APEY  +   +IKCDVYS+GV+LME  T KK
Sbjct:   804 VADFGIAKVLQARGKDSTTTVMAGTYGYLAPEYAYSSKATIKCDVYSFGVVLMELITGKK 863

Query:    65 PTNEMFTGKTNLRNWVSESLPDR--LTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
             P +  F    N+ NWVS  +  +  L E +D  L       S+K D +++ + +A+ C  
Sbjct:   864 PVDSCFGENKNIVNWVSTKIDTKEGLIETLDKRLSE-----SSKAD-MINALRVAIRCTS 917

Query:   123 ESPEQRICMTDAAAKL 138
              +P  R  M +    L
Sbjct:   918 RTPTIRPTMNEVVQLL 933

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 57/150 (38%), Positives = 83/150 (55%)

Query:     1 MVAHVSDFGISKLLGEGDG-SMTQTMTMA----TIGYMAPEYGSNGIVSIKCDVYSYGVL 55
             + AHVSDFG+++LL + D  S     + A    TIGY APEYG  G  SI+ DVYS+G+L
Sbjct:   861 LTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGIL 920

Query:    56 LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
             L+E F+ KKPT+E F G  NL ++ ++S+    T    +N + E          L  ++ 
Sbjct:   921 LLEMFSGKKPTDESFAGDYNLHSY-TKSILSGCTSSGGSNAIDEG---------LRLVLQ 970

Query:   116 LALDCCMESPEQRICMTDAAAKLKKIREKF 145
             + + C  E P  R+   +A  +L  IR KF
Sbjct:   971 VGIKCSEEYPRDRMRTDEAVRELISIRSKF 1000

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	153
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-07
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	5e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	5e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	7e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	9e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-04
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	4e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	7e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	9e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.001
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.001
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.001
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.001
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.001
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.001
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.002
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.002
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.002
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.002
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.002
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.003
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.003
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.003
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.004
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.004
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.004
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.004
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 20/135 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           +SDFG+S+ + E D    +      I +MAPE   +G  + K DV+S+GVLL E FT  +
Sbjct: 143 ISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE 202

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P    + G +N              EV+   L+ +        +C   +  L L C   
Sbjct: 203 QP----YPGMSN-------------EEVL--ELLEDGYRLPRPENCPDELYELMLQCWAY 243

Query: 124 SPEQRICMTDAAAKL 138
            PE R   ++    L
Sbjct: 244 DPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           +SDFG+S+ L + D    +      I +MAPE    G  + K DV+S+GVLL E FT  +
Sbjct: 143 ISDFGLSRDLYDDD-YYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGE 201

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P   M                + + E +       +       +C   +  L L C  E
Sbjct: 202 QPYPGM--------------SNEEVLEYLKNGYRLPQPP-----NCPPELYDLMLQCWAE 242

Query: 124 SPEQRICMTDAAAKL 138
            PE R   ++    L
Sbjct: 243 DPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           +SDFG+S+ L + D           I +MAPE    G  + K DV+S+GVLL E FT  +
Sbjct: 144 ISDFGLSRDLYDDD-YYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGE 202

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P    + G +N            + E +       +       +C   +  L L C  E
Sbjct: 203 EP----YPGMSN----------AEVLEYLKKGYRLPKPP-----NCPPELYKLMLQCWAE 243

Query: 124 SPEQRICMTDAAAKL 138
            PE R   ++    L
Sbjct: 244 DPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 36/144 (25%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           +SDFG+S+ + + D    +T     I +MAPE   +GI + K DV+S+GVLL E FT   
Sbjct: 146 ISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGA 205

Query: 64  KPTNEMFTGKTNLRNWVS--------ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
            P   +      +  ++         E  PD L E                      +M 
Sbjct: 206 TPYPGLSN--EEVLEYLRKGYRLPKPEYCPDELYE----------------------LM- 240

Query: 116 LALDCCMESPEQRICMTDAAAKLK 139
             L C    PE R   ++   +L+
Sbjct: 241 --LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE--YGSNGIVSIKCDVYSYGVLLME 58
            V  ++DFG++K L +   S+T T    T  YMAPE   G NG    K DV+S GV+L E
Sbjct: 135 GVVKIADFGLAKKLLKSSSSLT-TFV-GTPWYMAPEVLLGGNGY-GPKVDVWSLGVILYE 191

Query: 59  AFTKKKP 65
             T K P
Sbjct: 192 LLTGKPP 198

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-YGSNGIVSIKCDVYSYGVLLME 58
           ++DFG+SKLL      +   +   T  YMAPE     G  S K D++S GV+L E
Sbjct: 134 LADFGLSKLLTSDKSLLKTIV--GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.1 bits (123), Expect = 1e-08
 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 10/122 (8%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMA----TIGYMAPEY---GSNGIVSIKCDVYSYGV 54
           V  + DFG++KLL +   + +     +    T GYMAPE     S    S   D++S G+
Sbjct: 140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199

Query: 55  LLMEAFTKKKP---TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLL 111
            L E  T   P             L+  +    P   + +  +N     +  S  L  LL
Sbjct: 200 TLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLL 259

Query: 112 SI 113
           + 
Sbjct: 260 AK 261

Length = 384

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 32  YMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPD-RLTE 90
           Y+APE      ++ K D+Y +G++L+E  T K P +  F    ++  W      D  L  
Sbjct: 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDM 903

Query: 91  VVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK 139
            +D ++     + S   + ++ +M LAL C    P  R C  D    L+
Sbjct: 904 WIDPSIRG---DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949

Length = 968

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 12/143 (8%)

Query: 5   VSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-- 61
           + DFG++K+L +  +    +    + I + APE  +    S+  DV+S+GV+L E FT  
Sbjct: 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS 208

Query: 62  --KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
                P  E      N +          L E     L++      A   C   I  +  +
Sbjct: 209 DKSCSPPAEFMRMMGNDKQGQMIVY--HLIE-----LLKNNGRLPAPPGCPAEIYAIMKE 261

Query: 120 CCMESPEQRICMTDAAAKLKKIR 142
           C    P QR   ++ A +++ IR
Sbjct: 262 CWNNDPSQRPSFSELALQVEAIR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 31/136 (22%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLLME 58
           ++DFG+++ L    G    T  + T  YMAPE      YG         D++S GV+L E
Sbjct: 138 LADFGLARQLD--PGEKLTTF-VGTPEYMAPEVLLGKGYGK------AVDIWSLGVILYE 188

Query: 59  AFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
             T K P    F G   L          +            E + S +   L+  + L  
Sbjct: 189 LLTGKPP----FPGDDQLLELF------KKIGKPKPPFPPPEWDISPEAKDLIRKL-LVK 237

Query: 119 DCCMESPEQRICMTDA 134
           D     PE+R+   +A
Sbjct: 238 D-----PEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 20/136 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KK 63
           +SDFG+S+ +   D    Q+ ++  + +M PE    G  + + D++S+GV+L E F+   
Sbjct: 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGL 224

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P    + G +N              EV+   ++R  Q      DC   +  L ++C  E
Sbjct: 225 QP----YYGFSN-------------QEVI--EMIRSRQLLPCPEDCPARVYALMIECWNE 265

Query: 124 SPEQRICMTDAAAKLK 139
            P +R    D   +L+
Sbjct: 266 IPARRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++L+ E D    +      I + APE  + G  +IK DV+S+G+LL E  T
Sbjct: 141 VCKIADFGLARLI-EDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVT 199

Query: 62  K 62
            
Sbjct: 200 Y 200

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S  Q      + + APE       S K DV+S+G+LL E ++
Sbjct: 140 VAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 46.7 bits (111), Expect = 8e-07
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  +SDFG+S+    G  +++  +    I + APE  + G  + + DV+SYG+LL E F+
Sbjct: 131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190

Query: 62  K 62
            
Sbjct: 191 L 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.4 bits (111), Expect = 9e-07
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           V  ++DFG +K LG+ + +   T ++  T  +MAPE           D++S G  ++E  
Sbjct: 139 VVKLADFGCAKRLGDIE-TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMA 197

Query: 61  TKKKPTNEM 69
           T K P +E+
Sbjct: 198 TGKPPWSEL 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++++     GSM    +   + + APE   +   S K DV+SYGVLL E F+
Sbjct: 138 VAKVSDFGLARV-----GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
           DFG+S   GE   S+  T T  T  YMAPE       SI  DV+S G+ L+E
Sbjct: 148 DFGVS---GELVNSLAGTFT-GTSFYMAPERIQGKPYSITSDVWSLGLTLLE 195

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 139 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 197

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 198 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 239

Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 240 WRKEPEER 247

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 3   AHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+S+ LG G       T     + + APE  + G  S K DV+SYGV L EAF+
Sbjct: 134 AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Query: 62  K-KKPTNEM 69
              KP  EM
Sbjct: 194 YGAKPYGEM 202

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KK 63
           ++DFG++KLL   +           I +MA E   + I + K DV+SYGV + E  T   
Sbjct: 150 ITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGA 209

Query: 64  KP 65
           KP
Sbjct: 210 KP 211

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 20/136 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KK 63
           +SD G+S+ +   D    Q  ++  I +M PE    G  S   D++S+GV+L E F+   
Sbjct: 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGL 224

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P    + G +N              EV++  +VR+ Q      DC   +  L  +C  E
Sbjct: 225 QP----YYGFSN-------------QEVIE--MVRKRQLLPCSEDCPPRMYSLMTECWQE 265

Query: 124 SPEQRICMTDAAAKLK 139
            P +R    D   +L+
Sbjct: 266 GPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 5   VSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           +SDFG++K+L E       +    + I + APE       S   DV+S+GV L E FT  
Sbjct: 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG 209

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P+         LR          +T ++   L++E +       C   +  L   C   
Sbjct: 210 DPSQSPPA--EFLRMIGIAQGQMIVTRLL--ELLKEGERLPRPPSCPDEVYDLMKLCWEA 265

Query: 124 SPEQRICMTDAAAKLKKIR 142
            P+ R    D    + ++R
Sbjct: 266 EPQDRPSFADLILIVDRLR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 19/128 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  ++DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELV 197

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV++   V          DC +S+  L L C
Sbjct: 198 TKGRVP---YPGMNN-------------REVLEQ--VERGYRMPCPQDCPISLHELMLQC 239

Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 240 WKKDPEER 247

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 19/80 (23%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLLME 58
           + DFGISK+L      + +T+   T  Y++PE      Y        K D++S G +L E
Sbjct: 144 LGDFGISKVL-SSTVDLAKTVV-GTPYYLSPELCQNKPYNY------KSDIWSLGCVLYE 195

Query: 59  AFTKKKPTNEMFTGKTNLRN 78
             T K P    F G  NL  
Sbjct: 196 LCTLKHP----FEG-ENLLE 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 16/84 (19%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIG---YMAPEYGSNGIVSIKCDVYSYGVLLME 58
           +  + D GISK+       + + M    IG   YMAPE       S K D++S G LL E
Sbjct: 141 LVKIGDLGISKV-------LKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYE 193

Query: 59  AFTKKKPTNEMFTGKT--NLRNWV 80
             T   P    F  ++  +LR  V
Sbjct: 194 MATFAPP----FEARSMQDLRYKV 213

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 14/70 (20%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +DFG++K L       ++T T   T  Y+APE           D +S GVLL        
Sbjct: 135 TDFGLAKELSSEG---SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLY------- 184

Query: 65  PTNEMFTGKT 74
              EM TGK 
Sbjct: 185 ---EMLTGKP 191

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 44.0 bits (104), Expect = 6e-06
 Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 22/131 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+   +     +       + APE  S+G  S K DV+S+G+LL E F
Sbjct: 141 LVCKVADFGLARLIK--EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMF 198

Query: 61  TKKK-PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  + P    + G  N              EV D   +           C   I  + L+
Sbjct: 199 TYGQVP----YPGMNN-------------HEVYD--QITAGYRMPCPAKCPQEIYKIMLE 239

Query: 120 CCMESPEQRIC 130
           C    PE R  
Sbjct: 240 CWAAEPEDRPS 250

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 20/128 (15%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA ++DFG+++ +            M  I +M PE   +GI + K DV+S+GVLL E F+
Sbjct: 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Query: 62  -KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
               P    + G+TN              EV++   V           C   +  +  DC
Sbjct: 217 LGYMP----YPGRTN-------------QEVME--FVTGGGRLDPPKGCPGPVYRIMTDC 257

Query: 121 CMESPEQR 128
              +PE R
Sbjct: 258 WQHTPEDR 265

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 43.8 bits (103), Expect = 7e-06
 Identities = 22/57 (38%), Positives = 35/57 (61%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +SDFG+S+   +G  + T  M    + + APE  + G  S + DV+S+G+LL EAF+
Sbjct: 135 ISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 20/141 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIF 218

Query: 61  T-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P    + G +N    V E +           L R          C   +  + L 
Sbjct: 219 TYGKQP----WYGLSN--EEVIECITQG------RLLQRPR-------TCPSEVYDIMLG 259

Query: 120 CCMESPEQRICMTDAAAKLKK 140
           C    P+QRI + D   +L+K
Sbjct: 260 CWKRDPQQRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI--VSIKCDVYSYGVLLMEA 59
           V  +SDFG SK L  G    T+T T  T+ YMAPE    G        D++S G  ++E 
Sbjct: 147 VVKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204

Query: 60  FTKKKPTNEM 69
            T K P  E+
Sbjct: 205 ATGKPPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 20/136 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK- 63
           +SD G+ + +   D       ++  I +M+PE    G  SI  D++SYGV+L E F+   
Sbjct: 165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 224

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           +P    + G +N              +V++  ++R  Q      DC   +  L L+C  E
Sbjct: 225 QP----YCGYSN-------------QDVIE--MIRNRQVLPCPDDCPAWVYTLMLECWNE 265

Query: 124 SPEQRICMTDAAAKLK 139
            P +R    D  ++L+
Sbjct: 266 FPSRRPRFKDIHSRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  ++DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELV 197

Query: 61  TKKK 64
           TK +
Sbjct: 198 TKGR 201

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 6   SDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +DFGISK+L   + ++ Q  T + T+ YM+PE       S   D++S G+ L+E    K 
Sbjct: 142 ADFGISKVL---ENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKF 198

Query: 65  P 65
           P
Sbjct: 199 P 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 140 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
            H++DF I+  +     ++T + +  T GYMAPE       S+  D +S GV   E    
Sbjct: 139 VHITDFNIATKVT--PDTLTTSTS-GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG 195

Query: 63  KKPTNEMFTGKTN-LRNWV 80
           K+P    + G +  +R+ +
Sbjct: 196 KRP----YRGHSRTIRDQI 210

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIG---YMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           DFG+S       G +  ++    +G   YMAPE       S+K D++S G+ L+E  T +
Sbjct: 144 DFGVS-------GQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Query: 64  KP 65
            P
Sbjct: 197 FP 198

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 20/57 (35%), Positives = 34/57 (59%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +SDFG+S+ + E D  + ++     + +MA E   + I + + DV+S+GVLL E  T
Sbjct: 168 ISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 3   AHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK LG  +     +T     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 134 AKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS 193

Query: 62  -KKKPTNEM 69
             +KP   M
Sbjct: 194 YGQKPYKGM 202

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  + DFG+++ +      + +      + +MAPE   N + + + DV+SYG+LL E F+
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 3   AHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK LG  D     ++     + + APE  +    S + DV+SYG+ + EAF+
Sbjct: 134 AKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS 193

Query: 62  -KKKPTNEM 69
             +KP  +M
Sbjct: 194 YGQKPYKKM 202

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--- 61
           + DFG+++ +      +++  T   + +MAPE   N + +   DV+S+G+LL E FT   
Sbjct: 280 ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGG 339

Query: 62  ---KKKPTNEMF 70
               + P NE F
Sbjct: 340 TPYPELPMNEQF 351

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP 65
           DFG+S   GE   S+  T  + T  YM+PE    G  ++K DV+S G+ ++E    K P
Sbjct: 147 DFGVS---GELINSIADTF-VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP 201

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 18/141 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           M   V+DFG+SK +  GD      +    + ++A E  ++ + + K DV+S+GV + E  
Sbjct: 149 MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIA 208

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T+ +     + G  N             +E+ D   +R+        DCL  +  L   C
Sbjct: 209 TRGQTP---YPGVEN-------------SEIYD--YLRQGNRLKQPPDCLDGLYSLMSSC 250

Query: 121 CMESPEQRICMTDAAAKLKKI 141
            + +P+ R        +L+K 
Sbjct: 251 WLLNPKDRPSFETLRCELEKA 271

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 9e-05
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)

Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVA      + DFG+++ + E D        +  + +MAPE   +G+ + K DV+S+GV+
Sbjct: 151 MVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210

Query: 56  LMEAFT 61
           L E  T
Sbjct: 211 LWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 25/127 (19%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ E +    +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 143 IADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGR 201

Query: 65  -PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL--DCLLSIMYLALDCC 121
            P    + G TN              EV+  NL   E+ +      +C   +  L   C 
Sbjct: 202 IP----YPGMTN-------------PEVIQ-NL---ERGYRMPRPDNCPEELYELMRLCW 240

Query: 122 MESPEQR 128
            E PE+R
Sbjct: 241 KEKPEER 247

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 138 VVKVSDFGMTRFVLD-DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS 196

Query: 62  KKK 64
           + K
Sbjct: 197 EGK 199

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 30/133 (22%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVLL E FT
Sbjct: 170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   + +
Sbjct: 230 LGGSPYPGIPVEELF------------------------KLLKEGYRMEKPQNCTQELYH 265

Query: 116 LALDCCMESPEQR 128
           L  DC  E P QR
Sbjct: 266 LMRDCWHEVPSQR 278

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 18/133 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           ++  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 219

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T  K            + W   S    + E +    V E         C   +  + L C
Sbjct: 220 TYGK------------QPWFQLS-NTEVIECITQGRVLERPRV-----CPKEVYDIMLGC 261

Query: 121 CMESPEQRICMTD 133
               P+QR+ + +
Sbjct: 262 WQREPQQRLNIKE 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPT 66
           DFG++K+LG    S  +T  + T  YM+PE  ++     K D++S G L+ E      P 
Sbjct: 153 DFGLAKILGHDS-SFAKTY-VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP- 209

Query: 67  NEMFTGKTNL 76
              FT +  L
Sbjct: 210 ---FTARNQL 216

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 21/124 (16%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + DFGISK+LG  + SM +T+ + T  YM+PE       + K D+++ G +L E  T K+
Sbjct: 142 LGDFGISKILGS-EYSMAETV-VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
                F   TN  N V         ++V  N       +S++L  L+           + 
Sbjct: 200 ----TFDA-TNPLNLV--------VKIVQGNYTPVVSVYSSELISLVH------SLLQQD 240

Query: 125 PEQR 128
           PE+R
Sbjct: 241 PEKR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 5   VSDFGISKLLGEGDGSMTQTMT----MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +SDFGISK L     S            ++ +MAPE       + K D++S G L++E  
Sbjct: 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML 206

Query: 61  TKKKP 65
           T K P
Sbjct: 207 TGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTM-ATIGYMAPE--YGSNGIVSIKCDVYSYGVLLMEAFT 61
           +SDFGISK   +   +  Q M+M  ++ +MAPE  +  +   S K D++S G +++E F 
Sbjct: 149 ISDFGISKKSDDIYDN-DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA 207

Query: 62  KKKPTNEM 69
            ++P ++ 
Sbjct: 208 GRRPWSDE 215

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 12/76 (15%)

Query: 26  TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-----KKPTNEMF-----TGKTN 75
            +  + ++APE       S K DV+S+GVL+ E FT+        ++E        GK  
Sbjct: 178 ALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE 237

Query: 76  LRNWVSESLPDRLTEV 91
           L   V E  P RL ++
Sbjct: 238 LP--VPEGCPSRLYKL 251

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+++++ E D    +      I + APE       SIK DV+S+G+LL E  T
Sbjct: 144 VADFGLARVIKE-DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 34/145 (23%), Positives = 52/145 (35%), Gaps = 27/145 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMAT-IGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-K 62
           + DFG+ + L + +        +     + APE       S   DV+ +GV L E FT  
Sbjct: 138 IGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYG 197

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
           ++P             W   S    L + +D    R E+       C   I  + L C  
Sbjct: 198 EEP-------------WAGLSGSQIL-KKIDKEGERLER----PEACPQDIYNVMLQCWA 239

Query: 123 ESPEQRICMTDAAAKLKKIREKFLD 147
            +P  R   T AA     +RE   +
Sbjct: 240 HNPADR--PTFAA-----LREFLPE 257

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 3   AHVSDFGISKLL-GEGDGSMTQ-TMTMATIG---YMAPEYGSNGIVSIKCDVYSYGVLLM 57
           A V DFGI  LL G  D  +   T T   +G   Y APE      V+   D+Y++G++ +
Sbjct: 121 AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFL 180

Query: 58  EAFTKK 63
           E  T +
Sbjct: 181 ECLTGQ 186

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 20/141 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + D++S+GV+L E F
Sbjct: 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIF 218

Query: 61  T-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P             W   S     TE ++   + + +       C   +  +   
Sbjct: 219 TYGKQP-------------WYQLS----NTEAIEC--ITQGRELERPRTCPPEVYAIMQG 259

Query: 120 CCMESPEQRICMTDAAAKLKK 140
           C    P+QR+ + D  ++L+ 
Sbjct: 260 CWQREPQQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--K 62
           ++DFG+S+ L   D    Q      I +MA E    G  + K DV+++GV L E  T  +
Sbjct: 171 IADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230

Query: 63  KKPTNEM 69
           ++P   +
Sbjct: 231 EQPYEHL 237

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 15/94 (15%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + DFG+S  L   D     TM + T  +MAPE  +      K D++S G+  +E    K 
Sbjct: 139 LIDFGLSAQLS--DTKARNTM-VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKP 195

Query: 65  P------TNEMFTGKTN----LRN--WVSESLPD 86
           P         +F   TN    LRN    S+   D
Sbjct: 196 PYSELPPMKALFKIATNGPPGLRNPEKWSDEFKD 229

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK-- 63
           +DFG++  L +        +   T  +MAPE       S   D++S G  ++E  T    
Sbjct: 141 ADFGVATKLNDVSKDDASVV--GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP 198

Query: 64  ----KPTNEMF 70
                P   +F
Sbjct: 199 YYDLNPMAALF 209

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           V  +SDFG+S+   E DG  + + +    I + APE  + G  S + DV+SYG+LL E F
Sbjct: 131 VLKISDFGMSR--QEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188

Query: 61  T 61
           +
Sbjct: 189 S 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 18/58 (31%), Positives = 32/58 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
           +V  VSDFG+S+ L + + + T       I + APE  +    +   DV+S+G+++ E
Sbjct: 143 LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 200

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 23/145 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L +     T T ++     I + APE  +    +   DV+SYG+++ 
Sbjct: 143 LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 202

Query: 58  EAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E  +  ++P  +M    +N              +V+  N + ++      +DC  ++  L
Sbjct: 203 EVMSYGERPYWDM----SN-------------QDVI--NAIEQDYRLPPPMDCPTALHQL 243

Query: 117 ALDCCMESPEQRICMTDAAAKLKKI 141
            LDC  +    R       + L K+
Sbjct: 244 MLDCWQKDRNARPKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   +   T   + +  PE       S K DV+S+GVL+ E F+
Sbjct: 138 VVKVSDFGLARYVLD-DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS 196

Query: 62  KKKPTNEMFT 71
           + K   E F+
Sbjct: 197 EGKMPYERFS 206

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           MVA + DFGI++ L +   SM    T   T  Y++PE   N   + K D++S G +L E 
Sbjct: 139 MVAKLGDFGIARQLND---SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 195

Query: 60  FTKKKP 65
            T K P
Sbjct: 196 CTLKHP 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 37.7 bits (87), Expect = 9e-04
 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  ++DFG+++++ E +    +      I + APE  + G  +IK DV+S+G+LLME  
Sbjct: 139 LVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 197

Query: 61  T 61
           T
Sbjct: 198 T 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 21/143 (14%)

Query: 1   MVAHVSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+S++L +  + + T       I + APE  +    +   DV+SYG+++ E 
Sbjct: 143 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 202

Query: 60  FT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
            +  ++P  EM    +N              +V+    + E     A +DC  ++  L L
Sbjct: 203 MSYGERPYWEM----SN-------------QDVIKA--IEEGYRLPAPMDCPAALHQLML 243

Query: 119 DCCMESPEQRICMTDAAAKLKKI 141
           DC  +   +R       + L K+
Sbjct: 244 DCWQKDRNERPKFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  + DFG+++ +      +++  T   + +MAPE   + + +   DV+SYG+LL E F+
Sbjct: 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 142 LVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 6   SDFGISKLLGEGD---GSMTQTMTMATIGYMAPEYGSNGIVSIK---CDVYSYGVLLMEA 59
            DFG +  L       G   Q++   T  YMAPE  + G         D++S G +++E 
Sbjct: 141 GDFGCAVKLKNNTTTMGEEVQSL-AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199

Query: 60  FTKKKPTNEM 69
            T K+P +E+
Sbjct: 200 ATGKRPWSEL 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVLL E FT
Sbjct: 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + + + DV+S+GVLL E F+
Sbjct: 211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 20/91 (21%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE----YGSNGIVSIKCDVYSYGVLLMEAFTK 62
           DFGIS  L +   S+ +T       YMAPE       +G   ++ DV+S G+ L      
Sbjct: 151 DFGISGQLVD---SIAKTRDAGCRPYMAPERIDPSARDG-YDVRSDVWSLGITLY----- 201

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVD 93
                E+ TGK     W   S+ D+LT+VV 
Sbjct: 202 -----EVATGKFPYPKW--NSVFDQLTQVVK 225

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + + D    +   +  + +MAPE   +G  + + DV+S+GVL+ E  T
Sbjct: 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Query: 62  KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
                 + +    N              EV+    V          +C   I  L  +C 
Sbjct: 209 LG---QQPYPALNNQ-------------EVL--QHVTAGGRLQKPENCPDKIYQLMTNCW 250

Query: 122 MESPEQR 128
            + P +R
Sbjct: 251 AQDPSER 257

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           ++  ++DFG+++++ E +    +      I + APE  + G  +IK DV+S+G+LL E  
Sbjct: 140 LMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIV 198

Query: 61  TKKK 64
           T  K
Sbjct: 199 TYGK 202

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + D G++KLL + + +   T+ + T  Y++PE   +   + K DV++ GV+L E  T K 
Sbjct: 142 IGDLGVAKLLSD-NTNFANTI-VGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH 199

Query: 65  P 65
           P
Sbjct: 200 P 200

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 21/143 (14%)

Query: 1   MVAHVSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +   VSDFG+S++L +  +G+ T +     I + APE  +    +   DV+S+G+++ E 
Sbjct: 144 LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 203

Query: 60  FT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
            +  ++P  +M                    EV+    + +     A +DC  ++  L L
Sbjct: 204 MSFGERPYWDMSN-----------------HEVMKA--INDGFRLPAPMDCPSAVYQLML 244

Query: 119 DCCMESPEQRICMTDAAAKLKKI 141
            C  +   +R    D    L K+
Sbjct: 245 QCWQQDRARRPRFVDIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 24/139 (17%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SD G++  + EG+    +   + T+GYMAPE  +N   ++  D +  G L+ E    + 
Sbjct: 143 ISDLGLAVKIPEGESIRGR---VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQS 199

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLT-EVVDTNLVREEQNFSAKL-DCLLSIMYLALDCCM 122
           P    F G+            +++  E VD  ++  E+ +SAK  +   SI  + L    
Sbjct: 200 P----FRGRK-----------EKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLL---T 241

Query: 123 ESPEQRI-CMTDAAAKLKK 140
           + P+QR+ C  + A ++K+
Sbjct: 242 KDPKQRLGCQEEGAGEVKR 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMATIGYMAPEY---GSNGIVSIKCDVYSYGVLLME 58
           HV  +DFG+SK     +     +    TI YMAPE    GS G      D +S GVL  E
Sbjct: 143 HVVLTDFGLSKEFLAEEEERAYSFC-GTIEYMAPEVIRGGSGGHDKA-VDWWSLGVLTFE 200

Query: 59  AFTKKKP 65
             T   P
Sbjct: 201 LLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 8/71 (11%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTM-ATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           ++DFG+SK   E      +  +   T+ YMAPE  +    +   D +S+GVL+ E  T  
Sbjct: 139 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGS 195

Query: 64  KPTNEMFTGKT 74
            P    F GK 
Sbjct: 196 LP----FQGKD 202

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
           + + ++DFG+S+  GE +  + +TM    + +MA E  +  + + K DV+S+GVLL E
Sbjct: 156 LASKIADFGLSR--GE-EVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE 210

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 36.4 bits (84), Expect = 0.003
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 14/71 (19%)

Query: 5   VSDFGIS-KLLGEGDGS-MTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG + +L  +G G+   Q   + TI +MAPE      YG +      CDV+S G ++
Sbjct: 145 IADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRS------CDVWSVGCVI 198

Query: 57  MEAFTKKKPTN 67
           +E  T K P N
Sbjct: 199 IEMATAKPPWN 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEY----GSNGIVSIKCDVYSYGVLLMEAFTK 62
           DFGIS  L +   S+ +T+      YMAPE      +     +K DV+S G+ ++E  T 
Sbjct: 147 DFGISGYLVD---SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG 203

Query: 63  KKPTNEMFTGKTNLRNWVSESLP 85
           + P +   T    L+  V E  P
Sbjct: 204 RFPYDSWKTPFQQLKQVVEEPSP 226

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)

Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 151 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210

Query: 56  LME 58
           L E
Sbjct: 211 LWE 213

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 309

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 21/83 (25%), Positives = 42/83 (50%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + DFG+++ + E D        +  + +M+PE   +G+ +   DV+S+GV+L E  T  +
Sbjct: 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 219

Query: 65  PTNEMFTGKTNLRNWVSESLPDR 87
              +  + +  LR  +   L D+
Sbjct: 220 QPYQGMSNEQVLRFVMEGGLLDK 242

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--K 62
           ++DFG+S+ L  GD    Q   +  I +MA E    G  +   DV+++GV L E FT  K
Sbjct: 170 IADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK 229

Query: 63  KKP 65
           ++P
Sbjct: 230 EQP 232

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  + DFG+++ +      + +      + +MAPE   N + + + DV+SYG+LL E F+
Sbjct: 252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.93
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.93
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.92
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.91
KOG0578	550	consensus p21-activated serine/threonine protein k	99.91
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.9
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.9
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.9
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.9
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.9
PHA02988	283	hypothetical protein; Provisional	99.89
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.89
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.88
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.88
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.88
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.87
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.87
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.86
KOG0198	313	consensus MEKK and related serine/threonine protei	99.86
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.86
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.85
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.85
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.85
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.85
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.84
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.84
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.84
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.84
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.84
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.84
PTZ00283	496	serine/threonine protein kinase; Provisional	99.83
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.83
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.83
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.83
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.83
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.83
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.83
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.83
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.83
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.83
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.83
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.83
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.83
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.83
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.83
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.83
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.83
PTZ00284	467	protein kinase; Provisional	99.82
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.82
PTZ00036	440	glycogen synthase kinase; Provisional	99.82
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.82
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.82
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.82
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.82
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.82
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.82
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.82
PHA02882	294	putative serine/threonine kinase; Provisional	99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.82
PTZ00267	478	NIMA-related protein kinase; Provisional	99.82
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.82
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.82
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.81
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.81
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.81
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.81
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.81
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.81
KOG0589	426	consensus Serine/threonine protein kinase [General	99.81
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.81
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.81
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.81
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.81
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.81
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.81
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.81
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.81
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.81
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.81
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.8
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.8
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.8
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.8
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.8
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.8
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.8
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.8
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.8
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.8
PHA03207	392	serine/threonine kinase US3; Provisional	99.8
PHA03212	391	serine/threonine kinase US3; Provisional	99.8
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.8
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.8
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.8
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.8
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.8
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.79
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.79
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.79
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.79
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.79
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.79
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.79
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.79
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.79
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.79
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.79
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.79
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.79
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.79
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.79
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.79
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.79
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.79
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.79
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.79
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.78
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.78
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.78
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.78
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.78
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.78
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.78
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.78
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.78
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.78
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.78
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.78
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.78
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.78
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.78
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.78
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.78
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.78
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.78
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.77
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.77
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.77
PHA03209	357	serine/threonine kinase US3; Provisional	99.77
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.77
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.77
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.77
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.77
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.77
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.77
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.77
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.77
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.77
PHA03211	461	serine/threonine kinase US3; Provisional	99.77
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.77
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.77
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.77
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.77
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.77
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.77
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.77
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.77
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.76
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.76
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.76
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.76
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.76
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.76
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.76
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.76
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.76
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.76
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.76
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.76
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.76
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.76
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.76
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.76
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.76
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.76
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.76
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.76
KOG0584	632	consensus Serine/threonine protein kinase [General	99.76
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.75
PHA03210	501	serine/threonine kinase US3; Provisional	99.75
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.75
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.75
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.75
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.75
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.75
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.75
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.75
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.75
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.75
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.75
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.75
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.75
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.75
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.75
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.75
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.75
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.75
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.75
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.75
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.75
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.74
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.74
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.74
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.74
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.74
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.74
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.74
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.74
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.74
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.74
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.74
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.74
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.74
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.74
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.74
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.74
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.74
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.74
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.74
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.74
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.74
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.74
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.74
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.74
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.74
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.74
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.73
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.73
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.73
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.73
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.73
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.73
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.73
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.73
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.73
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.73
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.73
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.73
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.73
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.73
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.73
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.72
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.72
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.72
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.72
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.72
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.72
PLN00181	793	protein SPA1-RELATED; Provisional	99.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.72
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.72
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.72
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.71
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.71
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.71
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.71
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.71
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.71
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.71
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.71
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.71
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.71
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.71
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.71
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.71
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.71
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.71
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.71
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.71
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.71
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.71
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.7
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.7
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.7
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.7
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.7
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.7
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.7
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.7
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.7
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.7
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.7
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.7
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.7
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.69
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.69
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.69
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.69
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.69
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.69
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.69
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.69
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.69
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.69
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.69
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.69
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.69
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.69
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.68
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.68
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.68
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.68
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.68
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.68
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.68
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.68
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.68
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.68
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.68
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.68
KOG0605	550	consensus NDR and related serine/threonine kinases	99.68
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.67
PLN00009	294	cyclin-dependent kinase A; Provisional	99.67
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.67
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.67
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.67
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.67
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.67
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.67
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.66
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.66
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.66
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.66
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.66
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.66
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.66
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.65
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.65
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.65
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.65
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.64
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.64
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.64
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.64
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.64
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.63
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.63
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.63
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.63
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.63
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.63
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.63
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.63
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.62
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.62
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.62
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.62
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.61
KOG0586	596	consensus Serine/threonine protein kinase [General	99.61
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.6
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.59
KOG3653	534	consensus Transforming growth factor beta/activin	99.59
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.59
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.57
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.55
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.54
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.53
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.51
KOG0610	459	consensus Putative serine/threonine protein kinase	99.49
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.49
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.49
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.43
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.42
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.4
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.4
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.35
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.31
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.31
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.3
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.25
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.25
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.99
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.99
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.89
KOG1152	772	consensus Signal transduction serine/threonine kin	98.75
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.66
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.63
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.61
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.6
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.43
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.42
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.06
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.49
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.46
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.21
COG4248	637	Uncharacterized protein with protein kinase and he	97.11
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.81
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.49
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	94.76
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	94.47
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	94.32
PRK09188	365	serine/threonine protein kinase; Provisional	94.31
KOG1093	725	consensus Predicted protein kinase (contains TBC a	91.71
PF04301	213	DUF452: Protein of unknown function (DUF452); Inte	88.69
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	88.55
KOG0576	829	consensus Mitogen-activated protein kinase kinase	82.1

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=7.9e-27  Score=159.69  Aligned_cols=124  Identities=30%  Similarity=0.439  Sum_probs=93.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+....+. +.......-+..|.|||.+....|+.++||||||+++||+++ |+.|+....          
T Consensus       341 ~vKIsDFGLAr~~~d~~-Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms----------  409 (468)
T KOG0197|consen  341 VVKISDFGLARLIGDDE-YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS----------  409 (468)
T ss_pred             eEEEcccccccccCCCc-eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC----------
Confidence            68999999999554333 333333345778999999999999999999999999999997 777764210          


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                             ..+++.  ..+...+.+.|..++..+.++|..||..+|++|||++.+...|+.+....
T Consensus       410 -------n~ev~~--~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  410 -------NEEVLE--LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             -------HHHHHH--HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence                   111110  11223345566778899999999999999999999999999999887653

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.93  E-value=3.5e-26  Score=155.34  Aligned_cols=126  Identities=24%  Similarity=0.353  Sum_probs=93.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC--CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS--NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~--~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      ++||+|||+++......  ...+...||+.|||||++.  ...|+.++||||||+++||+++|..||......       
T Consensus       182 ~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-------  252 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-------  252 (362)
T ss_pred             EEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-------
Confidence            79999999998864321  2233367999999999999  558999999999999999999999998642220       


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                            .....++....+.     ..+..++..+..++..||+.||.+||++.|++..|+.+......
T Consensus       253 ------~~~~~v~~~~~Rp-----~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  253 ------QVASAVVVGGLRP-----PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             ------HHHHHHHhcCCCC-----CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence                  0011111111111     11223667788999999999999999999999999999887654

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.92  E-value=2.7e-26  Score=151.41  Aligned_cols=119  Identities=21%  Similarity=0.292  Sum_probs=89.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||.|+.+...    ....++||..||+||.+.+..|+.++||||||+.++|++.|+.|+...........    
T Consensus       217 eVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~----  288 (364)
T KOG0581|consen  217 EVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF----  288 (364)
T ss_pred             CEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH----
Confidence            5899999999987433    45667999999999999999999999999999999999999999865311111111    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          +.+..+++    .+++..+.. ...+++..++..||+.||.+|||+.|++++
T Consensus       289 ----~Ll~~Iv~----~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  289 ----ELLCAIVD----EPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             ----HHHHHHhc----CCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                11222222    122222111 366789999999999999999999999987

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=5.2e-25  Score=153.02  Aligned_cols=115  Identities=17%  Similarity=0.261  Sum_probs=87.0

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      +++||+|||+|..+..+.+  .....+|||-|.|||++....++.-+||||+||++|.++.|++||++..-         
T Consensus       155 ~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v---------  223 (592)
T KOG0575|consen  155 MNVKIGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV---------  223 (592)
T ss_pred             CcEEecccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH---------
Confidence            5799999999998864422  34456899999999999988999999999999999999999999964110         


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          .+....     +....  +..|.....+..+|+.++|..+|.+|||+++|+.+
T Consensus       224 ----kety~~-----Ik~~~--Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  224 ----KETYNK-----IKLNE--YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             ----HHHHHH-----HHhcC--cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                111111     11111  12223455567889999999999999999999976

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.91  E-value=3.6e-25  Score=153.85  Aligned_cols=125  Identities=26%  Similarity=0.357  Sum_probs=97.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||-++.+...   .+.-.+.||..|||||++...+.+.++||||||+|+|||++|..|+.+.......      
T Consensus       250 ~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII------  320 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII------  320 (904)
T ss_pred             eEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE------
Confidence            5899999999987533   2344578999999999999999999999999999999999999998653221111      


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                                  .-+.......+.|..++..+.-|+..||+-.|..|||+.|++.+|+-....+++
T Consensus       321 ------------wGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~  374 (904)
T KOG4721|consen  321 ------------WGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS  374 (904)
T ss_pred             ------------EeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence                        111112223445567788899999999999999999999999999877665543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=6.4e-25  Score=151.46  Aligned_cols=117  Identities=18%  Similarity=0.241  Sum_probs=89.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++..+....  ......+|||+|||||++....|++++||||||++.+||+.|.+||..+..    +...  
T Consensus       407 ~vKltDFGFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAl--  478 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRAL--  478 (550)
T ss_pred             cEEEeeeeeeecccccc--CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHH--
Confidence            37999999999886543  256678999999999999998999999999999999999999999853111    1000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             .-+.    ....+....+......+.+|+.+||+.|+.+|+++.|||++
T Consensus       479 -------yLIa----~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  479 -------YLIA----TNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             -------HHHh----hcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence                   0000    00111223345566789999999999999999999999987

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.90  E-value=4.8e-25  Score=158.02  Aligned_cols=125  Identities=26%  Similarity=0.453  Sum_probs=95.1

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+++-.=..+.+...+...-+..|||||.+...+|+..+||||||+++||+++ |+.|+.....        
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--------  711 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--------  711 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------
Confidence            5799999999996544433333334456889999999999999999999999999999996 8888632110        


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                           .+.+..+....+      .++|..++.+++.||..||+..|++||+++|+-..|+..-+.
T Consensus       712 -----~EVIe~i~~g~l------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  712 -----QEVIECIRAGQL------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             -----HHHHHHHHcCCc------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence                 122233333333      345677889999999999999999999999999999887654

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1e-23  Score=143.92  Aligned_cols=139  Identities=36%  Similarity=0.606  Sum_probs=102.2

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccC-CCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMF-TGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~-~~~~~~~~~   79 (153)
                      |++||+|||+|+..... .........||.+|++||+......+.++||||||++++|+++|+.+..... .....+..|
T Consensus       214 ~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w  292 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW  292 (361)
T ss_pred             CCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence            68999999999765431 1111111178999999999988889999999999999999999998776433 233336666


Q ss_pred             hhhhccc-hhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           80 VSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        80 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ....... ....++|+.+....  +. .......+..++.+|++.+|.+||+|.||++.|+.+..
T Consensus       293 ~~~~~~~~~~~eiiD~~l~~~~--~~-~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  293 AKPLLEEGKLREIVDPRLKEGE--YP-DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHCcchhheeCCCccCCC--CC-hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            6444433 57777787765311  11 01567779999999999999999999999999966554

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=9.2e-25  Score=150.79  Aligned_cols=120  Identities=22%  Similarity=0.362  Sum_probs=86.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-----------ccccccchhhhHHHHHHHhcCCCCCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-----------VSIKCDVYSYGVLLMEAFTKKKPTNEMF   70 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-----------~~~~~dv~s~g~~~~~~~~g~~p~~~~~   70 (153)
                      .+||+|||.|..+..+.........+||+.||+||.+....           .+.++||||+||++|+|+.|++||....
T Consensus       497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~  576 (677)
T KOG0596|consen  497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII  576 (677)
T ss_pred             eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence            37999999999987665555556679999999999775432           5578999999999999999999985311


Q ss_pred             CCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           71 TGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..            ...+..+.++...-+.+..+...    +++++|..||+.||++||++.|||++
T Consensus       577 n~------------~aKl~aI~~P~~~Iefp~~~~~~----~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  577 NQ------------IAKLHAITDPNHEIEFPDIPEND----ELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HH------------HHHHHhhcCCCccccccCCCCch----HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            11            12233333443222222222222    28899999999999999999999986

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.6e-24  Score=144.75  Aligned_cols=115  Identities=18%  Similarity=0.208  Sum_probs=86.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++..+....  .....++||+.|||||++.+..|+.++||||+|++.+||++|.+|+.....          
T Consensus       149 ~vkl~DfgVa~ql~~~~--~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------  216 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNTV--KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------  216 (467)
T ss_pred             cEEEEecceeeeeechh--hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------
Confidence            58999999999876443  234668999999999999988999999999999999999999999754222          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             .+++.-.....++...  ......+.+++..||..+|+.||+|.+++++
T Consensus       217 -------mrvlflIpk~~PP~L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  217 -------MRVLFLIPKSAPPRLD--GDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             -------ceEEEeccCCCCCccc--cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence                   1111111111111111  1334558889999999999999999999986

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=159.76  Aligned_cols=128  Identities=26%  Similarity=0.410  Sum_probs=93.9

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .++||+|||+|+-+-..+.+.......-+..|||||.+..+.|+.++||||||+++||+++ |..|+......  ..   
T Consensus       839 r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v---  913 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EV---  913 (1025)
T ss_pred             CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HH---
Confidence            4799999999994433332333333345778999999999899999999999999999997 88887542111  00   


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                              +..+....      +.+.|..++..++++|..||..+|++||++..+++.+..+......
T Consensus       914 --------~~~~~~gg------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  914 --------LLDVLEGG------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             --------HHHHHhCC------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence                    01011110      2333456778899999999999999999999999999998877643

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=3.9e-24  Score=137.42  Aligned_cols=117  Identities=22%  Similarity=0.278  Sum_probs=84.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++.+.... + -.+..+|||.||+||++.+.+|+.++||||+||+++||..-+.||...     .+.... 
T Consensus       166 vvKLGDfGL~r~l~s~~-t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~-  237 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSSKT-T-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLC-  237 (375)
T ss_pred             ceeeccchhHhHhcchh-H-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHH-
Confidence            58999999999986442 2 234578999999999999999999999999999999999999998431     111111 


Q ss_pred             hhccchhhhhccccchhhhhcchhh-HHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAK-LDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                             .++.....      .+.| .....++..++..|+..||..||+.-.+++.+.
T Consensus       238 -------~KI~qgd~------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  238 -------KKIEQGDY------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             -------HHHHcCCC------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence                   11111111      1122 445667888999999999999999655554443

>PHA02988 hypothetical protein; Provisional

Probab=99.89  E-value=1.1e-23  Score=140.49  Aligned_cols=119  Identities=23%  Similarity=0.331  Sum_probs=84.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      ++||+|||+++......     ....|+..|+|||.+.+  ..++.++|||||||++|++++|..||.....     ...
T Consensus       161 ~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~  230 (283)
T PHA02988        161 KLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEI  230 (283)
T ss_pred             cEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence            58999999998754321     22357889999999875  5789999999999999999999999853210     000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .        ..+.....     ....+...+..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus       231 ~--------~~i~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        231 Y--------DLIINKNN-----SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             H--------HHHHhcCC-----CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            0        00100000     011112345578899999999999999999999999998764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=4.8e-24  Score=142.72  Aligned_cols=119  Identities=21%  Similarity=0.245  Sum_probs=86.2

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      +.+||+|||+|+......   .....|||+.|.|||++.+..   +..++|+||+||+++-+++|.+||.......... 
T Consensus       316 ~llKItDFGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~-  391 (475)
T KOG0615|consen  316 CLLKITDFGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK-  391 (475)
T ss_pred             eEEEecccchhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH-
Confidence            358999999999875332   234468999999999988754   3347899999999999999999997543322111 


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 ..+...++...   ...+.+...+..+++.+||..||+.|||+.|+|++
T Consensus       392 -----------eQI~~G~y~f~---p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  392 -----------EQILKGRYAFG---PLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             -----------HHHhcCccccc---ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence                       11111111111   12235566778899999999999999999999986

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.88  E-value=2.4e-23  Score=146.17  Aligned_cols=124  Identities=21%  Similarity=0.356  Sum_probs=98.1

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +||+|||+++.+.... +++.+...-+..|++||.+....++.++|||-||+.+||++. |..||.-...          
T Consensus       530 VKLaDFGLSR~~ed~~-yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------  598 (974)
T KOG4257|consen  530 VKLADFGLSRYLEDDA-YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------  598 (974)
T ss_pred             eeecccchhhhccccc-hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------
Confidence            7999999999986543 444444456788999999999999999999999999999985 8889853111          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                             ..++.  ..+...+.++|+.+++.+..+|.+||.++|.+||.++|+...|..+.++..
T Consensus       599 -------sDVI~--~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek  654 (974)
T KOG4257|consen  599 -------SDVIG--HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK  654 (974)
T ss_pred             -------cceEE--EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence                   11111  112334467788899999999999999999999999999999999988543

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.88  E-value=4.9e-23  Score=140.37  Aligned_cols=125  Identities=21%  Similarity=0.357  Sum_probs=85.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..||....... ......
T Consensus       212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~  290 (338)
T cd05102         212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRL  290 (338)
T ss_pred             cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHH
Confidence            579999999987543322222233345678999999988889999999999999999996 888875321110 010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .           .....      ..+......+.+++.+||+.+|.+|||+.||++.|+++..+
T Consensus       291 ~-----------~~~~~------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         291 K-----------DGTRM------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             h-----------cCCCC------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            0           00000      01122345678999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.88  E-value=5.1e-24  Score=152.10  Aligned_cols=129  Identities=23%  Similarity=0.388  Sum_probs=97.4

Q ss_pred             CceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHH-hcCCCCCccCCCccchHH
Q 043099            1 MVAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF-TKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~   78 (153)
                      .++|++|||+++.+.++.. ..+.....-+..|.|||.+...+++.++||||||+||||+. .|..|+=+..        
T Consensus       768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--------  839 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--------  839 (996)
T ss_pred             eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc--------
Confidence            3689999999998865442 22233233467899999999999999999999999999977 4888862210        


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                            .+...+.     .+...+.+.|.+++..+.+||+.||+.|-..||++.|++.+|+++.++..+-
T Consensus       840 ------NQdVIka-----Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SL  898 (996)
T KOG0196|consen  840 ------NQDVIKA-----IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSL  898 (996)
T ss_pred             ------hHHHHHH-----HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhh
Confidence                  1111111     1223345566789999999999999999999999999999999999987543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=4.5e-23  Score=145.07  Aligned_cols=114  Identities=25%  Similarity=0.275  Sum_probs=87.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|.....+.   .....||++.|.+||++.+.+|. .++||||+|++++.+++|+.||..     ..+.   
T Consensus       150 nIKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir---  218 (786)
T KOG0588|consen  150 NIKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIR---  218 (786)
T ss_pred             CEeeeccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHH---
Confidence            47999999998754432   34456899999999999998776 779999999999999999999863     1111   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                           ..+.++..       ..+..|.....++.+|+.+|+..||..|.|++||+++-
T Consensus       219 -----~LLlKV~~-------G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  219 -----VLLLKVQR-------GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             -----HHHHHHHc-------CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence                 11111111       12445566777889999999999999999999999874

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.87  E-value=7.6e-22  Score=123.04  Aligned_cols=122  Identities=20%  Similarity=0.171  Sum_probs=82.6

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSE   82 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~   82 (153)
                      +|+  ||+++......       ..|++.|+|||++.+..++.++|||||||+++++++|..|+................
T Consensus        50 ~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~  120 (176)
T smart00750       50 LKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG  120 (176)
T ss_pred             eee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH
Confidence            566  99887754321       257899999999998889999999999999999999999975322211111111111


Q ss_pred             hccchhhhhccccchhhhhcchhhHHHH--HHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           83 SLPDRLTEVVDTNLVREEQNFSAKLDCL--LSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....            .......+....  ..+.+++.+||+.+|.+||++.|+++++..+..+.
T Consensus       121 ~~~~------------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~  173 (176)
T smart00750      121 MPAD------------DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET  173 (176)
T ss_pred             hccC------------CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence            0000            000000111122  25889999999999999999999999998886654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.2e-22  Score=143.11  Aligned_cols=123  Identities=24%  Similarity=0.346  Sum_probs=91.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+|++|||+++++.++. +..+....-+..|.|||.+....++.++|||+||+++||+.+ |+.|+.....         
T Consensus       403 iVKvADFGLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---------  472 (1157)
T KOG4278|consen  403 IVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------  472 (1157)
T ss_pred             eEEeeccchhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---------
Confidence            58999999999997664 333333344678999999988899999999999999999996 8888743110         


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                               ..++ .+.+...+...+.-|++.++.||+.||+..|.+||+++|+.+.++.+...
T Consensus       473 ---------SqVY-~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  473 ---------SQVY-GLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             ---------HHHH-HHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence                     0011 11112222223345778899999999999999999999999999988765

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.86  E-value=2.8e-22  Score=133.46  Aligned_cols=121  Identities=24%  Similarity=0.441  Sum_probs=85.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..||.....  ....   
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~---  236 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVI---  236 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH---
Confidence            579999999987543322222334456788999999888789999999999999999997 8888743111  0010   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                               ..+.....     ...+...+..+.+++.+||+.+|.+||++.||++.|+.+
T Consensus       237 ---------~~i~~~~~-----~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         237 ---------EMIRSRQL-----LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             ---------HHHHcCCc-----CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence                     00100000     011234556788999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=5.9e-23  Score=136.38  Aligned_cols=122  Identities=22%  Similarity=0.268  Sum_probs=83.3

Q ss_pred             ceEecccccceeccC-CCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGE-GDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~-~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.... ...........||+.|++||++... .....+||||+||++.||++|..|+...   .......
T Consensus       156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~  232 (313)
T KOG0198|consen  156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF---FEEAEAL  232 (313)
T ss_pred             eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh---cchHHHH
Confidence            589999999987753 1112223456899999999999853 3345899999999999999999997542   0000000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                               ..+......+     ..+.....+..+++.+|+..+|..||||++++++--.
T Consensus       233 ---------~~ig~~~~~P-----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  233 ---------LLIGREDSLP-----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             ---------HHHhccCCCC-----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence                     1111111001     1123355678889999999999999999999998543

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.86  E-value=6.7e-22  Score=134.81  Aligned_cols=124  Identities=23%  Similarity=0.355  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++.+.........+...++..|+|||.+.+..++.++|||||||+++++++ |..||....... .+....
T Consensus       211 ~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~  289 (337)
T cd05054         211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL  289 (337)
T ss_pred             cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH
Confidence            479999999987643322222333455678999999988889999999999999999997 888874311110 010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ...            ...     ..+......+.+++.+||+.+|++||++.||+++|+++.+
T Consensus       290 ~~~------------~~~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         290 KEG------------TRM-----RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hcc------------CCC-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            000            000     0011233467889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.85  E-value=6.3e-22  Score=136.62  Aligned_cols=123  Identities=21%  Similarity=0.333  Sum_probs=83.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...............++..|+|||++.+..++.++|||||||+++++++ |..||....... ......
T Consensus       250 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~  328 (374)
T cd05106         250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMV  328 (374)
T ss_pred             eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHH
Confidence            579999999987543322112222335667999999887789999999999999999997 999975422111 010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .            .....     ..+...+.++.+++.+||+.+|.+|||+.+|++.|+++.
T Consensus       329 ~------------~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         329 K------------RGYQM-----SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             H------------cccCc-----cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            0            00000     001112356888999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=8.6e-22  Score=129.88  Aligned_cols=136  Identities=19%  Similarity=0.133  Sum_probs=85.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCC--CccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT--GKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~--~~~~~~~   78 (153)
                      .+||+|||+|+...........+..+.|.+|.|||++.. ..|+...||||.||++.||++|++.|.....  .-..+..
T Consensus       163 ~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~  242 (359)
T KOG0660|consen  163 DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILE  242 (359)
T ss_pred             CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHH
Confidence            479999999998754322333467789999999997654 4799999999999999999999987642111  0011111


Q ss_pred             hhhhhccchhhhhcccc----ch--hhhhcchh---hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTN----LV--REEQNFSA---KLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~----~~--~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...-+..+.+..+....    +.  +..+..+.   -+...+..++++.+||..||.+|+|++|.+++
T Consensus       243 ~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  243 LLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             hcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            11111111111111000    00  00000000   02345678899999999999999999999986

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=8.8e-22  Score=134.01  Aligned_cols=134  Identities=16%  Similarity=0.148  Sum_probs=84.8

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCc--cchH
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK--TNLR   77 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~--~~~~   77 (153)
                      +.+||+|||+|+...+..   .-+.++.|.+|+|||++.. ..|+.+.|+|++||+++|+++-++.|....+-+  ..+-
T Consensus       147 ~~iKiaDFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc  223 (538)
T KOG0661|consen  147 DVIKIADFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKIC  223 (538)
T ss_pred             ceeEecccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHH
Confidence            368999999999875432   3456789999999997654 479999999999999999998876654321111  0011


Q ss_pred             Hhhhhhccchhhh------hccccchhhhhc--chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTE------VVDTNLVREEQN--FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..........+..      ...-..-...+.  ...-..+..++.+++.+|+++||++||||.|++++
T Consensus       224 ~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  224 EVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            1111111111111      111111000000  00012366788999999999999999999999986

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.85  E-value=1.8e-21  Score=129.48  Aligned_cols=124  Identities=20%  Similarity=0.338  Sum_probs=85.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  ....+..
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~  224 (279)
T cd05111         147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLL  224 (279)
T ss_pred             cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence            579999999987654332222333456778999999988789999999999999999997 8888743111  0111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ....            ..     ..+..+...+..++.+||..+|.+|||+.|+++.|..+.+.
T Consensus       225 ~~~~------------~~-----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         225 EKGE------------RL-----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             HCCC------------cC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            1000            00     00111233567789999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.84  E-value=1.3e-21  Score=126.99  Aligned_cols=130  Identities=18%  Similarity=0.241  Sum_probs=85.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+..+..  .=+.++.|.+|+|||.+.+ ..|+..+|||+.||++.||++|..-++.    .+.+....
T Consensus       139 vvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG----~SDiDQLy  212 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG----RSDIDQLY  212 (396)
T ss_pred             cEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC----cchHHHHH
Confidence            579999999999875432  2345788999999999888 4799999999999999999999876532    11111111


Q ss_pred             --h---hhccchhhhhcccc------chhhhhc----chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 --S---ESLPDRLTEVVDTN------LVREEQN----FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 --~---~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                        .   .........++...      ..+...+    ...-+.....+++++.+|+..||++|++-+|++.+
T Consensus       213 ~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  213 LIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             HHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence              1   11111111121110      0011000    00002334568899999999999999999999976

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.84  E-value=2.4e-21  Score=133.79  Aligned_cols=122  Identities=19%  Similarity=0.321  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...........+...++..|+|||.+.+..++.++|||||||+++++++ |..||...... .......
T Consensus       252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~  330 (375)
T cd05104         252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMI  330 (375)
T ss_pred             cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHH
Confidence            479999999987643321111222335667999999988889999999999999999997 77786432111 1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ...            ....     .+...+.++.+++.+||+.+|++|||+.||++.|++.
T Consensus       331 ~~~------------~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         331 KEG------------YRML-----SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HhC------------ccCC-----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            100            0000     0111234688999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.84  E-value=4.3e-22  Score=132.24  Aligned_cols=131  Identities=20%  Similarity=0.152  Sum_probs=87.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccc------
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN------   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~------   75 (153)
                      .+||+|||.|..-.+     .++..+.|..|.|||++.+..|+.++||||+||++.|+.+|...|++.......      
T Consensus       250 ~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  250 AIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             ceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence            578999999987532     235567899999999999999999999999999999999999877654422110      


Q ss_pred             -------------hHHhhhhhccchhh-------hhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 043099           76 -------------LRNWVSESLPDRLT-------EVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAA  135 (153)
Q Consensus        76 -------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  135 (153)
                                   -..++..+.-++..       ..+.....+........+.....+++|+.+||.+||.+|+|+.|++
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence                         00011111000000       0011111111111223356677899999999999999999999998


Q ss_pred             HH
Q 043099          136 AK  137 (153)
Q Consensus       136 ~~  137 (153)
                      .+
T Consensus       405 ~H  406 (415)
T KOG0671|consen  405 SH  406 (415)
T ss_pred             cC
Confidence            75

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.2e-21  Score=131.30  Aligned_cols=126  Identities=21%  Similarity=0.269  Sum_probs=83.2

Q ss_pred             ceEecccccceeccCCCC-Cccc-ccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQ-TMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~-~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||.+..+..... .... ...+|+++|+|||++..  +.|+.|+|||||||+..|+.+|..||.....-...+.
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~  243 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL  243 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence            479999999887654321 1122 55689999999999543  3699999999999999999999999865332211111


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . ..+..+.......+.         .........+..++..||..||++|||+++++.+
T Consensus       244 t-Lqn~pp~~~t~~~~~---------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  244 T-LQNDPPTLLTSGLDK---------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             H-hcCCCCCcccccCCh---------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            1 111111111111110         0112223467889999999999999999999986

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.3e-21  Score=128.11  Aligned_cols=138  Identities=17%  Similarity=0.189  Sum_probs=91.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.|+.+..++   ......+|..|+|||.+.+. .|+.+.||||.|||+.||+.|++.|.. ..+...+...+
T Consensus       164 ~LKicDFGSAK~L~~~e---pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIi  239 (364)
T KOG0658|consen  164 VLKICDFGSAKVLVKGE---PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEII  239 (364)
T ss_pred             eEEeccCCcceeeccCC---CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHH
Confidence            58999999999986544   34567889999999998876 699999999999999999999987754 22222222222


Q ss_pred             h---hhccchhhhhc-------cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 043099           81 S---ESLPDRLTEVV-------DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIRE  143 (153)
Q Consensus        81 ~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~  143 (153)
                      .   -+..+.+..+-       .+.+......--.......+..+++.+++.++|++|.++.|++.+  .++++.
T Consensus       240 k~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  240 KVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             HHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence            1   11111111111       111221111000123345678899999999999999999999987  444443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=2e-21  Score=130.09  Aligned_cols=125  Identities=22%  Similarity=0.292  Sum_probs=98.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|=.+++-+...+..+.......+..|+++|.+.+..|+.++||||||+++||+.+ |+.|+.....         
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP---------  504 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP---------  504 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH---------
Confidence            689999999997766655555555566889999999999899999999999999999997 8888753211         


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                           ....     .+.....+...|.++++++..+|..||...|++||+++|+.+.|.+...++
T Consensus       505 -----fEm~-----~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  505 -----FEME-----HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             -----HHHH-----HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence                 0011     112223344556778899999999999999999999999999999988765

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.84  E-value=3.4e-21  Score=128.86  Aligned_cols=124  Identities=24%  Similarity=0.388  Sum_probs=86.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++................++..|++||.+.+..++.++||||||++++++++ |..|+.....  ...... 
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~-  237 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TEVIEC-  237 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH-
Confidence            579999999986544322222334456788999999988889999999999999999998 8888743111  000000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                                .........      +...+..+.+++.+||+.+|++||++.+|++.|+.+...
T Consensus       238 ----------~~~~~~~~~------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         238 ----------ITQGRVLER------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             ----------HhCCCCCCC------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence                      101000000      112345678999999999999999999999999999653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.84  E-value=1.3e-21  Score=123.98  Aligned_cols=116  Identities=18%  Similarity=0.206  Sum_probs=84.9

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSE   82 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~   82 (153)
                      +||+|||++..+.++.   ......|||.|++||++...+|+..+|||+.|++++-++.|..||-.+  ....+...   
T Consensus       152 vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--~~~rlye~---  223 (355)
T KOG0033|consen  152 VKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYEQ---  223 (355)
T ss_pred             eeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--cHHHHHHH---
Confidence            7999999999886332   445578999999999999999999999999999999999999998421  11111111   


Q ss_pred             hccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           83 SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              +....+.-.   .+..+...+...+++++||..||.+|.|+.|.|++
T Consensus       224 --------I~~g~yd~~---~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  224 --------IKAGAYDYP---SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             --------HhccccCCC---CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence                    111111100   11123444567889999999999999999999876

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=2.5e-21  Score=137.75  Aligned_cols=117  Identities=21%  Similarity=0.221  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+.............|++.|+|||.+.+..++.++|||||||+++++++|..||....     ......
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~  255 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMH  255 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHH
Confidence            589999999987653322222334578999999999988889999999999999999999999985311     111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .........      .+......+.+++.+||+.+|.+||++.+++++
T Consensus       256 --------~~~~~~~~~------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        256 --------KTLAGRYDP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             --------HHhcCCCCC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence                    111111100      112234568889999999999999999999875

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.83  E-value=4.1e-21  Score=127.77  Aligned_cols=124  Identities=21%  Similarity=0.272  Sum_probs=85.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+.............++..|+|||.+.+..++.++||||||++++++++ |..|+.....  ..+....
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~  232 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYL  232 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHH
Confidence            579999999987643322111222345667999999888789999999999999999998 8888743211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...            ..     ...+...+..+.+++.+||..+|++|||+.||++.|+.+.++
T Consensus       233 ~~~------------~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         233 KDG------------YR-----LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HcC------------CC-----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            100            00     001122345678999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.83  E-value=2e-21  Score=134.07  Aligned_cols=117  Identities=15%  Similarity=0.217  Sum_probs=85.3

Q ss_pred             CceEecccccceeccCCCC-----------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCcc
Q 043099            1 MVAHVSDFGISKLLGEGDG-----------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEM   69 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~-----------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~   69 (153)
                      +++||+|||.|+.+.....           ......++||..|.+||++.....++.+|+|+|||++|+|+.|++||...
T Consensus       211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~  290 (604)
T KOG0592|consen  211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA  290 (604)
T ss_pred             CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence            5789999999998864221           11124589999999999999989999999999999999999999998531


Q ss_pred             CCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           70 FTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                        ....+..++.....  ..+...++...+|+.+.|..||++|+++.|+.++
T Consensus       291 ------------------NeyliFqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  291 ------------------NEYLIFQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ------------------cHHHHHHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence                              11111111211111  1122233567788999999999999999988776

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.83  E-value=2.2e-21  Score=135.05  Aligned_cols=114  Identities=20%  Similarity=0.313  Sum_probs=88.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++|++|||+|+.+..+  +...+...|||.|||||.+.++.|+..+|.||+||++||++.|++||..             
T Consensus       138 ~~KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-------------  202 (808)
T KOG0597|consen  138 TLKLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-------------  202 (808)
T ss_pred             ceeechhhhhhhcccC--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-------------
Confidence            6899999999998654  4566777899999999999999999999999999999999999999842             


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .........+.......       +......+..++...|..||.+|.+..+++.+
T Consensus       203 ~si~~Lv~~I~~d~v~~-------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  203 RSITQLVKSILKDPVKP-------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHHHHHHHHhcCCCCC-------cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            11111122222222211       23556678889999999999999999999987

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.83  E-value=4.3e-21  Score=133.95  Aligned_cols=128  Identities=20%  Similarity=0.278  Sum_probs=86.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      +|||+|||++..-.............|...|+|||++.-   .+|+..+||||||||+||+++|..|+.........   
T Consensus       526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi---  602 (678)
T KOG0193|consen  526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII---  602 (678)
T ss_pred             cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE---
Confidence            589999999875432211112233457889999998753   26999999999999999999999998521111100   


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                                ..+-.+.....  ......+++.++.+|+..||.+++++||.+.+|+..|+.+...
T Consensus       603 ----------fmVGrG~l~pd--~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  603 ----------FMVGRGYLMPD--LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             ----------EEecccccCcc--chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence                      00001100000  0001145667889999999999999999999999988888763

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.83  E-value=4.8e-21  Score=127.41  Aligned_cols=125  Identities=19%  Similarity=0.325  Sum_probs=84.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||...+..++.++|||||||+++++++ |..|+.....  .......
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~  224 (279)
T cd05109         147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLL  224 (279)
T ss_pred             cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence            479999999987753322111122234667999999988889999999999999999998 8888643111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...            ..     .+.+......+.+++.+||+.+|++||++.+++..|.++.+..
T Consensus       225 ~~~------------~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         225 EKG------------ER-----LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HCC------------Cc-----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            100            00     0001123446788999999999999999999999998887654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.83  E-value=7.7e-21  Score=125.85  Aligned_cols=121  Identities=24%  Similarity=0.383  Sum_probs=83.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++|||||||+++++++ |..|+....  ........
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~~  228 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDYL  228 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH
Confidence            579999999987654322212222334668999999888789999999999999999998 878864311  11111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .           .....      ..+......+.+++.+||+.+|++|||+.||++.|+++
T Consensus       229 ~-----------~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         229 R-----------HGNRL------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             H-----------cCCCC------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1           11000      01122345788999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.83  E-value=5.4e-21  Score=127.58  Aligned_cols=134  Identities=18%  Similarity=0.122  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh-
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV-   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-   80 (153)
                      .+||+|||+++...... ........|++.|+|||++.+..++.++||||+||+++++++|..||........ +.... 
T Consensus       138 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~  215 (287)
T cd07848         138 VLKLCDFGFARNLSEGS-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQK  215 (287)
T ss_pred             cEEEeeccCcccccccc-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            47999999998764322 1122334688999999999888899999999999999999999999864221110 00000 


Q ss_pred             -hhhccchhhhhc--ccc--------chh-hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 -SESLPDRLTEVV--DTN--------LVR-EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 -~~~~~~~~~~~~--~~~--------~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                       ....+.......  +..        ... ..............+.+++.+||+.+|++|||++|++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         216 VLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence             000000000000  000        000 000000011234568899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.83  E-value=5.3e-21  Score=127.78  Aligned_cols=124  Identities=23%  Similarity=0.381  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||++++++++ |..|+.....  .....  
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~~~~--  233 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIE--  233 (288)
T ss_pred             cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH--
Confidence            478999999986543322222233445778999999988889999999999999999998 8888643211  00100  


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                               .+........      +......+.+++.+||+.+|.+|||+.||+..|+.+...
T Consensus       234 ---------~i~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         234 ---------CITQGRVLQR------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             ---------HHHcCCcCCC------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence                     0110000000      011234688999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=5.6e-21  Score=135.80  Aligned_cols=118  Identities=22%  Similarity=0.363  Sum_probs=87.3

Q ss_pred             ceEecccccceeccCCCCCccc-ccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQ-TMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~-~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+.+.+..+...+.- ....-++.|+|||.+...+|+.++|||+||+++|||++ |..|+.....        
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------  321 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------  321 (1039)
T ss_pred             eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------
Confidence            5899999999999876654433 33445678999999999999999999999999999997 7777632110        


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                            ..+-+.++     .....+-+..+..+++++|.+||..+|.+|||+..+.+.+
T Consensus       322 ------~qIL~~iD-----~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  322 ------IQILKNID-----AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             ------HHHHHhcc-----ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence                  01111122     1122333466888999999999999999999999887554

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.83  E-value=3.6e-21  Score=128.18  Aligned_cols=120  Identities=25%  Similarity=0.399  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||+||+++++++ |..|+.....     ... 
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~-  235 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDV-  235 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHH-
Confidence            579999999887643322222233345778999999887788999999999999999997 7777642110     001 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                             ...+......      +.+...+..+.+++..||+.+|.+||+++|++..|+.
T Consensus       236 -------~~~i~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         236 -------IEMIRNRQVL------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -------HHHHHcCCcC------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                   1111111111      1112344567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.83  E-value=5.1e-21  Score=129.42  Aligned_cols=125  Identities=22%  Similarity=0.363  Sum_probs=85.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+.............++..|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--~~~~~~~  224 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL  224 (316)
T ss_pred             cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence            579999999997754332222222234667999999988889999999999999999987 8888743110  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .            ....     .+.+......+.+++.+||+.+|.+||++.+++..|..+....
T Consensus       225 ~------------~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         225 E------------KGER-----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             h------------CCCC-----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            0            0000     0111122345778999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.83  E-value=5.5e-21  Score=121.91  Aligned_cols=132  Identities=19%  Similarity=0.262  Sum_probs=84.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++.+.......+++  +-|.+|+|||.+.+. .|+..+|+||.||++.|++.|.+-|.. ...-..+...+
T Consensus       139 ~lKiADFGLAr~f~~p~~~~~~~--V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG-~sDidQL~~If  215 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSPNRIQTHQ--VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG-DSDIDQLSKIF  215 (318)
T ss_pred             cEEeecccchhccCCCCcccccc--eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC-CchHHHHHHHH
Confidence            47999999999987655433333  779999999998876 699999999999999999988654321 11111111111


Q ss_pred             ---hhhccchhhhhcc-ccchhhhhcchh------hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 ---SESLPDRLTEVVD-TNLVREEQNFSA------KLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ---~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         ..+.++.+..+.. +.+... ..++.      -..+..+.++++.+++.++|.+|+|++|++++
T Consensus       216 ~~LGTP~~~~WP~~~~lpdY~~~-~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  216 RALGTPTPDQWPEMTSLPDYVKI-QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHcCCCCcccCccccccccHHHH-hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence               1112222222221 000000 00111      12344567899999999999999999999876

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.83  E-value=6.1e-21  Score=127.67  Aligned_cols=122  Identities=25%  Similarity=0.385  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++|||||||+++++++ |..|+.....     ....
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~  244 (293)
T cd05053         170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----EELF  244 (293)
T ss_pred             eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-----HHHH
Confidence            479999999987643221111222234567999999888889999999999999999997 8777643111     0000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .         .......     ...+......+.+++.+||..+|++|||+.|+++.|+.+.
T Consensus       245 ~---------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         245 K---------LLKEGYR-----MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             H---------HHHcCCc-----CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            0         0000000     0011123456788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.7e-21  Score=135.08  Aligned_cols=126  Identities=29%  Similarity=0.417  Sum_probs=89.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...  ..........-+..|+|||.+....|+.++|||||||++||+++ |..|+.....         
T Consensus       300 ~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~---------  368 (474)
T KOG0194|consen  300 VVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN---------  368 (474)
T ss_pred             eEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH---------
Confidence            47999999998753  11112212245778999999998899999999999999999998 7778743111         


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                               ..+...+.....+.+.+...+..+..++.+||..+|++||+|.++.+.|+.+.....+
T Consensus       369 ---------~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  369 ---------YEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             ---------HHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence                     0111111111111122234566777888999999999999999999999999888654

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.83  E-value=1.2e-21  Score=129.17  Aligned_cols=118  Identities=26%  Similarity=0.455  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+...|+|||.+.+..++.++||||||++++|+++ |..|+...  ....+    
T Consensus       141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~----  214 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEI----  214 (259)
T ss_dssp             EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHH----
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc----
Confidence            589999999988743322222333456778999999988789999999999999999999 67776431  10101    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                             .........      ...+...+..+.+++.+||+.+|.+|||+.++++.|
T Consensus       215 -------~~~~~~~~~------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  215 -------IEKLKQGQR------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             -------HHHHHTTEE------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             -------ccccccccc------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                   011111100      111123445678899999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=9.4e-21  Score=137.36  Aligned_cols=123  Identities=25%  Similarity=0.398  Sum_probs=86.5

Q ss_pred             ceEecccccceeccCCCCCccccccc--ccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTM--ATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~--g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||+|+.......+.... ..  -+..|+|||.+....|+.++||||||+++||+.+ |..|+...... ..+..
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~-~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~l~~  533 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKS-SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EELLE  533 (609)
T ss_pred             EEEEccccceeccCCCCceEecC-CCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HHHHH
Confidence            68999999999654333222121 12  3567999999999899999999999999999997 77887431100 00000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      +                 .....+...|..+..++.++|..||+.+|++||++.|+.+.++....
T Consensus       534 ~-----------------l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  534 F-----------------LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             H-----------------HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            1                 11111222345567788999999999999999999999999998543

>PTZ00284 protein kinase; Provisional

Probab=99.82  E-value=1.2e-20  Score=133.59  Aligned_cols=129  Identities=14%  Similarity=0.090  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+.....     .....+||+.|+|||++.+..++.++|||||||+++|+++|+.||....... .+ ..+.
T Consensus       286 ~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~-~~i~  358 (467)
T PTZ00284        286 RVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE-HL-HLME  358 (467)
T ss_pred             eEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HH-HHHH
Confidence            489999998764321     2234578999999999998889999999999999999999999985422110 00 0000


Q ss_pred             hh---ccchhh---------hhcc------ccchhhh-----h-cchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ES---LPDRLT---------EVVD------TNLVREE-----Q-NFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~---~~~~~~---------~~~~------~~~~~~~-----~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .+..+.         .+..      .......     . ...........+.+|+.+||.+||++|||++|++++
T Consensus       359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H  438 (467)
T PTZ00284        359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH  438 (467)
T ss_pred             HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence            00   000000         0000      0000000     0 000001112457799999999999999999999986

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.82  E-value=8.4e-21  Score=126.17  Aligned_cols=119  Identities=28%  Similarity=0.434  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..||......  ..... 
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~-  236 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIEC-  236 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH-
Confidence            579999999986533221122233345778999999988889999999999999999998 98887432110  01100 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                                .........      +...+..+.+++.+||+.+|.+||++.||++.|+
T Consensus       237 ----------~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         237 ----------ITQGRLLQR------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ----------HHcCCcCCC------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence                      000100000      1123456789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.82  E-value=4.9e-21  Score=134.60  Aligned_cols=132  Identities=17%  Similarity=0.142  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+....   ......|++.|+|||++.+. .++.++||||+||+++++++|..||....... .+....
T Consensus       209 ~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~  284 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRII  284 (440)
T ss_pred             ceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            58999999998764322   12234679999999987664 68999999999999999999999985322111 111111


Q ss_pred             hh---hccchhhh-------hccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTE-------VVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ........       ...+.+.........+...+.++.+++.+||..+|.+|||+.|++++
T Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        285 QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            00   00000000       00000000000000111234578899999999999999999999977

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.82  E-value=1.1e-20  Score=125.13  Aligned_cols=121  Identities=24%  Similarity=0.401  Sum_probs=82.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|++||...+..++.++||||||++++++++ |..||....  ........
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~  227 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSEIYDYL  227 (272)
T ss_pred             CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH
Confidence            579999999987643321111222345678999999988889999999999999999998 777874311  11111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..           .....      .+......+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       228 ~~-----------~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         228 RQ-----------GNRLK------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             Hc-----------CCCCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            10           00000      0112334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.82  E-value=1.2e-20  Score=131.14  Aligned_cols=124  Identities=20%  Similarity=0.368  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||++++++++ |..|+........ .....
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~~~~  353 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FYNKI  353 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HHHHH
Confidence            579999999987643222212223346778999999888789999999999999999996 8888753211100 00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .           .. ..     ...+...+..+.+++.+||+.+|++||++.+|.+.|+++.+
T Consensus       354 ~-----------~~-~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         354 K-----------SG-YR-----MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             h-----------cC-CC-----CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            0           00 00     01112344568899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.82  E-value=1.3e-20  Score=126.84  Aligned_cols=126  Identities=25%  Similarity=0.303  Sum_probs=80.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh--cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||++++++++  +..|+.....  ......
T Consensus       176 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--~~~~~~  253 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD--EQVIEN  253 (304)
T ss_pred             cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH--HHHHHH
Confidence            589999999987643322222333455778999999887789999999999999999986  4456542111  000000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...        ..........  ...+..++..+.+++.+||+.+|++|||+.||.+.|+
T Consensus       254 ~~~--------~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         254 AGE--------FFRDQGRQVY--LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHH--------Hhhhcccccc--ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            000        0000000000  0001223456889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.82  E-value=2.1e-20  Score=126.41  Aligned_cols=67  Identities=18%  Similarity=0.239  Sum_probs=52.7

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|||+++.+..... ........||+.|+|||++.+. .++.++||||+||+++++++|..||..
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            589999999987653321 1122345789999999988764 588999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.82  E-value=2.2e-20  Score=124.84  Aligned_cols=132  Identities=19%  Similarity=0.189  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++|||||||+++++++|..||...... ..+.....
T Consensus       148 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~  223 (290)
T cd07862         148 QIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD  223 (290)
T ss_pred             CEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHH
Confidence            57999999998764321   233446899999999998878999999999999999999999987542211 11111111


Q ss_pred             hh---ccchhhhhc---cccchhhhhc-c-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ES---LPDRLTEVV---DTNLVREEQN-F-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~---~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .+..+....   .......... . .........+.+++.+||+.+|++|||+.|++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            00   000000000   0000000000 0 0001233567789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.5e-21  Score=137.09  Aligned_cols=117  Identities=23%  Similarity=0.296  Sum_probs=85.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      ++||+|||-++.+-+- ..+ ...+.||..|||||++-.+  .|+.++|||||||++.||.+|++||......       
T Consensus       714 vlKISDFGTsKRLAgi-nP~-TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp-------  784 (1226)
T KOG4279|consen  714 VLKISDFGTSKRLAGI-NPC-TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP-------  784 (1226)
T ss_pred             eEEecccccchhhccC-Ccc-ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-------
Confidence            5899999999987432 122 2346799999999998754  5999999999999999999999998532110       


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              -..++.--+-.  .+.+.|.+...+...++++|+.++|.+||++.++++.
T Consensus       785 --------qAAMFkVGmyK--vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  785 --------QAAMFKVGMYK--VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             --------hHhhhhhccee--cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence                    01111111111  1223456777888999999999999999999999864

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.82  E-value=8.1e-21  Score=126.22  Aligned_cols=119  Identities=25%  Similarity=0.386  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++................+..|++||.+.+..++.++|||||||+++++++ |..||......  ......
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~  234 (277)
T cd05036         157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFV  234 (277)
T ss_pred             ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence            479999999987632221111112234567999999988889999999999999999996 88887532110  111110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .            .....     ..+...+..+.+++.+||+.+|++|||+.+|+++|+
T Consensus       235 ~------------~~~~~-----~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 T------------GGGRL-----DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             H------------cCCcC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            0            00000     001223456788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.82  E-value=3.8e-20  Score=124.04  Aligned_cols=125  Identities=12%  Similarity=0.039  Sum_probs=83.4

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+|+.+......     .......||+.|+|||...+..++.++|||||||+++++++|..||..........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            5789999999876432111     11123468999999999988889999999999999999999999986432111111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      . ....   ...........     .   ....+..+.+++..|+..+|++||++.++++.|
T Consensus       244 ~-~~~~---~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        244 H-AAKC---DFIKRLHEGKI-----K---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             H-HhHH---HHHHHhhhhhh-----c---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            0 0000   00011111100     0   012345688999999999999999999999876

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=2.6e-20  Score=123.02  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++..+....  .......+++.|++||.+.+..++.++|+||+|++++++++|..|+......   ......
T Consensus       144 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~  218 (267)
T cd08228         144 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQ  218 (267)
T ss_pred             CEEECccccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHH
Confidence            47899999998764322  1122345788899999988878889999999999999999999997432111   111110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ..     .....+..        ........+.+++.+||..+|++||++.+|++.|++++
T Consensus       219 ~~-----~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         219 KI-----EQCDYPPL--------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HH-----hcCCCCCC--------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            00     00000000        01233456889999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.82  E-value=2.6e-20  Score=124.14  Aligned_cols=136  Identities=19%  Similarity=0.268  Sum_probs=85.9

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......... ......++..|++||.+.+..++.++||||||++++++++|..|+..............
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  224 (283)
T cd05080         145 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK  224 (283)
T ss_pred             cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc
Confidence            47999999998765332111 11223456679999998877889999999999999999999988643221110000000


Q ss_pred             h-hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 S-ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      . ..........+....     ..+.+...+..+.+++.+||+.+|++|||+++|++.|+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         225 QGQMTVVRLIELLERGM-----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             ccccchhhhhhhhhcCC-----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            0 000000111111110     01112234567889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=1.2e-20  Score=133.97  Aligned_cols=117  Identities=21%  Similarity=0.207  Sum_probs=82.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+............+||+.|+|||.+.+..++.++|||||||+++++++|..||.....     ...  
T Consensus       207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~--  279 (478)
T PTZ00267        207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REI--  279 (478)
T ss_pred             cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            5799999999976543222233445789999999999888899999999999999999999999743110     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...........      .+......+.+++.+||+.+|++||++.+++.+
T Consensus       280 ------~~~~~~~~~~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        280 ------MQQVLYGKYDP------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             ------HHHHHhCCCCC------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence                  11111111100      011233568889999999999999999999764

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.82  E-value=1.6e-20  Score=125.57  Aligned_cols=124  Identities=27%  Similarity=0.397  Sum_probs=84.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  ..+    
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~----  238 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP--ERL----  238 (290)
T ss_pred             cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--HHH----
Confidence            579999999986543221112222345678999998887789999999999999999998 8888743110  001    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                              ..........     ..+......+.+++..||+.+|++||++.|+++.|+++..+
T Consensus       239 --------~~~~~~~~~~-----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         239 --------FNLLKTGYRM-----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             --------HHHHhCCCCC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence                    1111110000     01122334678899999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=1.1e-20  Score=129.53  Aligned_cols=135  Identities=18%  Similarity=0.208  Sum_probs=85.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCC--CccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFT--GKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~--~~~~~~~   78 (153)
                      ++||+|||+|+++.... ...-+..+-|.+|.|||++.+. .|+..+|+||.||++.|++.|++.++...+  .-..+-.
T Consensus       256 ~LKiaDFGLAr~y~~~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfk  334 (560)
T KOG0600|consen  256 VLKIADFGLARFYTPSG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFK  334 (560)
T ss_pred             CEEeccccceeeccCCC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHH
Confidence            58999999999886543 2234556789999999999887 699999999999999999999987643211  1112222


Q ss_pred             hhhhhccchhh--hhccccc-hhhh---hcchh-hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLT--EVVDTNL-VREE---QNFSA-KLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~--~~~~~~~-~~~~---~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .+.......+.  +...... ....   ..+.. -.......++|+..+|..||.+|.||.++++.
T Consensus       335 lcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  335 LCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             HhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            22222222222  1100000 0000   00000 01223556788899999999999999998864

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.82  E-value=2.1e-20  Score=125.77  Aligned_cols=122  Identities=20%  Similarity=0.335  Sum_probs=82.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++++++++ |..|+...... .......
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~  257 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLI  257 (302)
T ss_pred             eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHH
Confidence            478999999987643322112222345678999999888888999999999999999997 88887432111 0000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .            ....     ...+......+.+++.+||+.+|++|||+.||++.|+++
T Consensus       258 ~------------~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         258 K------------EGYR-----MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             H------------cCCc-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            0            0000     000111234688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.81  E-value=2.4e-20  Score=123.24  Aligned_cols=121  Identities=26%  Similarity=0.447  Sum_probs=83.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~  221 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAV  221 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHH
Confidence            479999999998752222222222345678999999988889999999999999999987 8888743111  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .           ... .     .+.+...+..+.+++.+||+.+|++||++.||+++|+++
T Consensus       222 ~-----------~~~-~-----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         222 E-----------DGY-R-----LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             H-----------cCC-C-----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            0           000 0     001122345678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.81  E-value=1.1e-20  Score=125.56  Aligned_cols=119  Identities=23%  Similarity=0.369  Sum_probs=80.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..|+.....     ....
T Consensus       157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-----~~~~  231 (277)
T cd05062         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-----EQVL  231 (277)
T ss_pred             CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence            579999999986543322111222345778999999988789999999999999999998 6777642111     0000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                              ..........      .+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus       232 --------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         232 --------RFVMEGGLLD------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             --------HHHHcCCcCC------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence                    0001110000      01223456788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.81  E-value=2.8e-20  Score=125.20  Aligned_cols=124  Identities=22%  Similarity=0.356  Sum_probs=84.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||++++++++ |..|+....     .....
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~  249 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----VEELF  249 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----HHHHH
Confidence            479999999987643322212222345678999999988789999999999999999998 666653210     11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..        ..... .     ...+......+.+++.+||..+|.+|||+.||++.|+++..-
T Consensus       250 ~~--------~~~~~-~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         250 KL--------LKEGH-R-----MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HH--------HHcCC-c-----CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            10        00000 0     001123345688899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.81  E-value=1.3e-20  Score=125.72  Aligned_cols=117  Identities=21%  Similarity=0.256  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|+..|+|||.+.+..++.++||||+||+++++++|..||.......  ......
T Consensus       140 ~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~  214 (285)
T cd05631         140 HIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVD  214 (285)
T ss_pred             CEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHH
Confidence            57999999998764322   1233468999999999988889999999999999999999999985422110  000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                              ..+    ....  ...+......+.+++.+||+.+|++||+     +++++++
T Consensus       215 --------~~~----~~~~--~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         215 --------RRV----KEDQ--EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             --------HHh----hccc--ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence                    000    0000  0011223346778999999999999997     8999886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.81  E-value=2e-20  Score=123.48  Aligned_cols=120  Identities=23%  Similarity=0.329  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++....... ........++..|++||.+.+..++.++|||||||+++++++ |..|+.....     ....
T Consensus       142 ~~kl~df~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~  215 (263)
T cd05052         142 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVY  215 (263)
T ss_pred             cEEeCCCccccccccce-eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence            47999999998764322 111112234567999999888889999999999999999998 8888643111     1110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..         +.....     ...+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       216 ~~---------~~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         216 EL---------LEKGYR-----MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HH---------HHCCCC-----CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            00         000000     001122345688899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.9e-20  Score=128.26  Aligned_cols=114  Identities=22%  Similarity=0.235  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-cc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++......  .......+|++.|+|||++.+.. |+ .++||||+|++++.|++|..||...     .....
T Consensus       159 ~~Kl~DFG~s~~~~~~--~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~~l  231 (370)
T KOG0583|consen  159 NLKLSDFGLSAISPGE--DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVPNL  231 (370)
T ss_pred             CEEEeccccccccCCC--CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHHHH
Confidence            5899999999987311  22445568999999999999876 76 7799999999999999999998651     11111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHH-HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDC-LLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        ..+....       +..+... ..++..++.+|+..+|.+|+|+.+++++
T Consensus       232 ~--------~ki~~~~-------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h  275 (370)
T KOG0583|consen  232 Y--------RKIRKGE-------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH  275 (370)
T ss_pred             H--------HHHhcCC-------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence            1        1111111       1111112 5578889999999999999999999944

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=1.3e-20  Score=128.75  Aligned_cols=114  Identities=21%  Similarity=0.219  Sum_probs=86.3

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSE   82 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~   82 (153)
                      +||+|||+|+.+....  ......+||+.|++||++.+.+|+.++||||+||+++|+.+-+.+|.....           
T Consensus       145 VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----------  211 (426)
T KOG0589|consen  145 VKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----------  211 (426)
T ss_pred             eeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----------
Confidence            5999999999986543  234556899999999999999999999999999999999999888753111           


Q ss_pred             hccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           83 SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                        .....++....+      .+.+.....++..++..|+..+|..||++.+|+..
T Consensus       212 --~~Li~ki~~~~~------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  212 --SELILKINRGLY------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             --HHHHHHHhhccC------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence              111122222211      12223445678889999999999999999999987

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.81  E-value=2.3e-20  Score=124.26  Aligned_cols=119  Identities=25%  Similarity=0.413  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++................+++.|++||.+.+..++.++|||||||+++++++ |..||.....  ...    
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~----  233 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--TEA----  233 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--HHH----
Confidence            589999999986543321112223345678999999988889999999999999999998 8888643111  000    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                             ...........      .+...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       234 -------~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         234 -------IECITQGRELE------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             -------HHHHHcCccCC------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence                   00111100000      01123356789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.81  E-value=4.3e-20  Score=122.12  Aligned_cols=119  Identities=23%  Similarity=0.403  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~  226 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHV  226 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHH
Confidence            589999999986543221112222345678999999988889999999999999999997 8888743111  0111000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .           ...      ....+...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus       227 ~-----------~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         227 T-----------AGG------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             h-----------cCC------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            0           000      00111233456789999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.81  E-value=2.8e-20  Score=125.19  Aligned_cols=125  Identities=21%  Similarity=0.350  Sum_probs=84.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~  224 (303)
T cd05110         147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLL  224 (303)
T ss_pred             ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            479999999987653322212222345678999999888889999999999999999987 8888743111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...            ..     .+.+......+..++.+||..+|++||++.+|++.|..+.+..
T Consensus       225 ~~~------------~~-----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         225 EKG------------ER-----LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             HCC------------CC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence            100            00     0001112345778999999999999999999999999886553

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.81  E-value=3.4e-20  Score=126.20  Aligned_cols=131  Identities=18%  Similarity=0.231  Sum_probs=83.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....    ......|++.|+|||.+.+..++.++|||||||+++++++|+.||.....  ..+.....
T Consensus       142 ~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~~~  215 (331)
T cd06649         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA--KELEAIFG  215 (331)
T ss_pred             cEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhc
Confidence            4799999999865432    12334689999999999888899999999999999999999999853211  11111111


Q ss_pred             hhccch-------------------------------hhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC
Q 043099           82 ESLPDR-------------------------------LTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC  130 (153)
Q Consensus        82 ~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  130 (153)
                      ......                               .....+.......+..+ ......++.+++.+||+.+|++|||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-NGVFTPDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC-CccccHHHHHHHHHHccCCcccCCC
Confidence            000000                               00000000000000000 0123457889999999999999999


Q ss_pred             HHHHHHHHH
Q 043099          131 MTDAAAKLK  139 (153)
Q Consensus       131 ~~evl~~l~  139 (153)
                      +.|++++-.
T Consensus       295 ~~ell~h~~  303 (331)
T cd06649         295 LKMLMNHTF  303 (331)
T ss_pred             HHHHhcChH
Confidence            999998853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.81  E-value=1.6e-20  Score=118.83  Aligned_cols=125  Identities=17%  Similarity=0.186  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCc-------ccccccccccccCcCccCCC---CccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM-------TQTMTMATIGYMAPEYGSNG---IVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-------~~~~~~g~~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .++|.|||.+....-.....       ......+|..|+|||.+...   ..+.++|||||||++|++..|..||.....
T Consensus       167 ~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~  246 (302)
T KOG2345|consen  167 LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ  246 (302)
T ss_pred             ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence            57899999987653111100       11234578999999987643   578999999999999999999999976544


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ....+.-.+           ....+.     .+........+.+++..|++.||.+||++.+++..++.+.
T Consensus       247 ~GgSlaLAv-----------~n~q~s-----~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  247 QGGSLALAV-----------QNAQIS-----IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             cCCeEEEee-----------eccccc-----cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            322221111           111111     0111113456888999999999999999999999998764

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.81  E-value=3.3e-20  Score=123.63  Aligned_cols=120  Identities=26%  Similarity=0.424  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..||....  ........
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~  239 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMV  239 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH
Confidence            579999999987643322222333445678999999887788999999999999999998 887863211  00011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      ..           ....      +.+......+.+++.+||+.+|.+||++.++++.|..
T Consensus       240 ~~-----------~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         240 RK-----------RQLL------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             Hc-----------CCcC------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            00           0000      0111233567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.81  E-value=3.7e-20  Score=122.02  Aligned_cols=123  Identities=21%  Similarity=0.353  Sum_probs=81.4

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcC-CCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK-KPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++........  .......++..|+|||.+.+..++.++||||||++++++++|. .|+...  .......
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~  213 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--DSFDITV  213 (262)
T ss_pred             cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHH
Confidence            5799999999865432111  1112234567899999988778999999999999999999954 444321  0001110


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .           ........      .+...+..+.+++.+||..+|++||++.||++.|+++..
T Consensus       214 ~-----------~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         214 Y-----------LLQGRRLL------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             H-----------HhcCCCCC------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            1           11100000      011223468899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.81  E-value=2.6e-20  Score=119.74  Aligned_cols=117  Identities=24%  Similarity=0.293  Sum_probs=86.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||++..+.+..   .++...|.+.||+||.+.-   .+|+-++||||||+++.|+.+|+.||.....+...+..
T Consensus       230 niKlCDFGIsGrlvdSk---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk  306 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVDSK---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK  306 (391)
T ss_pred             CEEeecccccceeeccc---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH
Confidence            47999999998875433   4455578899999998753   36899999999999999999999999765555444443


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...+..+.                .+........+.+++..||..|+.+||.-.+++++
T Consensus       307 vln~ePP~----------------L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  307 VLNEEPPL----------------LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHhcCCCC----------------CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            33321111                11111133567889999999999999999999876

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.81  E-value=2.9e-21  Score=125.82  Aligned_cols=117  Identities=18%  Similarity=0.276  Sum_probs=92.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||.+..+...  -...+..+||+.|+|||++..-.|+.++||||+|++-.||..|++|+.....          
T Consensus       167 ~AKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP----------  234 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP----------  234 (502)
T ss_pred             hhhhhhccccchhhhh--HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc----------
Confidence            4799999999877532  2345567899999999999887899999999999999999999999854211          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             .+.+.......++.+..|.....++.+++..||-..|++|.|+.+++++
T Consensus       235 -------MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  235 -------MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             -------cceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence                   1111122223344566678889999999999999999999999999986

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.81  E-value=3e-20  Score=122.44  Aligned_cols=120  Identities=23%  Similarity=0.378  Sum_probs=81.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++......... ......++..|+|||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       141 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~  217 (261)
T cd05072         141 MCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SDVMSAL  217 (261)
T ss_pred             cEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HHHHHHH
Confidence            4789999999876432211 1122345678999999887788899999999999999998 8888743111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ...        .    .     .+.....+..+.+++.+||+.+|++||+++++.+.|+++
T Consensus       218 ~~~--------~----~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         218 QRG--------Y----R-----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HcC--------C----C-----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            000        0    0     000112334678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.80  E-value=2.6e-20  Score=126.91  Aligned_cols=136  Identities=18%  Similarity=0.206  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCcc--ch
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT--NL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~--~~   76 (153)
                      .+||+|||+++....... ........|++.|+|||++.+  ..++.++|||||||+++++++|+.||........  ..
T Consensus       141 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~  220 (338)
T cd07859         141 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLI  220 (338)
T ss_pred             cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Confidence            589999999986532211 112234578999999998765  4688999999999999999999999853221000  00


Q ss_pred             HHhhhhhccchhhhhcccc-------chhhh-hcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTN-------LVREE-QNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..............+....       +.... .... ........+.+++.+||+.+|++|||++|++++
T Consensus       221 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         221 TDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0000000000000000000       00000 0000 001123457789999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.80  E-value=5e-20  Score=124.48  Aligned_cols=126  Identities=21%  Similarity=0.352  Sum_probs=84.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~  249 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EELFKLL  249 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            479999999987643211111112234567999999888789999999999999999998 7777642110  0011110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      .           ......      .+...+..+.+++.+||+.+|++|||+.|+++.|+++.....
T Consensus       250 ~-----------~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~  298 (314)
T cd05099         250 R-----------EGHRMD------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS  298 (314)
T ss_pred             H-----------cCCCCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence            0           000000      012234467789999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.80  E-value=2.5e-20  Score=119.87  Aligned_cols=118  Identities=22%  Similarity=0.254  Sum_probs=85.2

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCC------CCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      +.+||+|||+|..+..+.   .....+|||+|.|||.+..      ..|+..+|.|++|++++.++.|..||-.      
T Consensus       160 ~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH------  230 (411)
T KOG0599|consen  160 MNIKISDFGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH------  230 (411)
T ss_pred             cceEEeccceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH------
Confidence            468999999999886554   4566799999999998753      2477889999999999999999999721      


Q ss_pred             chHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           75 NLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ++..- -+..+..+.+   ...-+...+......+++.+||+.||++|.|++|+|++
T Consensus       231 ------RkQml-MLR~ImeGky---qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  231 ------RKQML-MLRMIMEGKY---QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             ------HHHHH-HHHHHHhccc---ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence                  11000 0000111111   01122346667778899999999999999999999987

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.80  E-value=3.5e-20  Score=121.91  Aligned_cols=120  Identities=27%  Similarity=0.383  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++......... ......++..|++||.+....++.++|+||||++++++++ |..||.....  ..+...
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~  210 (257)
T cd05116         133 YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQM  210 (257)
T ss_pred             eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Confidence            47999999998765332211 1122234578999999887788899999999999999997 8888753211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      ....            ..     .+.+...+.++.+++.+||+.+|.+||++.+|.+.|++
T Consensus       211 i~~~------------~~-----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         211 IESG------------ER-----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHCC------------CC-----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            1100            00     00112234567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.80  E-value=4e-20  Score=121.25  Aligned_cols=119  Identities=27%  Similarity=0.398  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++................++..|++||.+.+..++.++||||||++++++++ |..|+......  ..    
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~----  205 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QT----  205 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HH----
Confidence            479999999886543221111111223456999999988888999999999999999997 77776431110  00    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                              ...+.....     ...+...+..+.+++.+||+.+|++|||+.||++.|+
T Consensus       206 --------~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         206 --------REAIEQGVR-----LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             --------HHHHHcCCC-----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence                    000000000     0111223456888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=2.1e-20  Score=124.05  Aligned_cols=119  Identities=24%  Similarity=0.402  Sum_probs=80.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++|||||||+++++++ |..|+.....  .......
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~  234 (277)
T cd05032         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFV  234 (277)
T ss_pred             CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHH
Confidence            579999999986643321112223346778999999887788999999999999999998 8888642110  0011010


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .           .....      ..+...+..+.+++.+||+.+|++|||+.+++..|+
T Consensus       235 ~-----------~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         235 I-----------DGGHL------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             h-----------cCCCC------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            0           00000      011123456889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.80  E-value=3.8e-20  Score=128.61  Aligned_cols=123  Identities=20%  Similarity=0.317  Sum_probs=83.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...............++..|++||.+.+..++.++||||||++++|+++ |..|+...... ....   
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~-~~~~---  352 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-EQFY---  352 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-HHHH---
Confidence            579999999986543221111222356788999999988788999999999999999998 77786432110 0000   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                               ..+.....     ...+......+.+++.+||+.+|.+||+++||++.|+.+.
T Consensus       353 ---------~~~~~~~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         353 ---------NAIKRGYR-----MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             ---------HHHHcCCC-----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                     00000000     0011223457889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.80  E-value=4.9e-20  Score=123.64  Aligned_cols=124  Identities=22%  Similarity=0.283  Sum_probs=84.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......   .......+..|++||...+..++.++|||||||+++++++ |..||.....     ....
T Consensus       157 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----~~~~  228 (297)
T cd05089         157 ASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----AELY  228 (297)
T ss_pred             eEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence            47999999986432111   1111223457999999888788999999999999999997 8888743111     0010


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      .        ..... ...     ..+......+.+++.+||+.+|.+||++.++++.|+.+.+....
T Consensus       229 ~--------~~~~~-~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         229 E--------KLPQG-YRM-----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             H--------HHhcC-CCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            0        01000 000     01112335678899999999999999999999999999887644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.80  E-value=4.2e-20  Score=123.77  Aligned_cols=126  Identities=24%  Similarity=0.320  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh--cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~   79 (153)
                      .++|+|||+++...............++..|++||.+.+..++.++|||||||+++++++  +..|+.....  ......
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--~~~~~~  245 (296)
T cd05051         168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--QQVIEN  245 (296)
T ss_pred             ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--HHHHHH
Confidence            578999999987543322222333456778999999887789999999999999999987  5556532110  000000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .......       .   ........+...+..+.+++.+||+.+|++|||+.||++.|+
T Consensus       246 ~~~~~~~-------~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         246 AGHFFRD-------D---GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHhcccc-------c---cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            0000000       0   000000111223356889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=5.2e-20  Score=124.04  Aligned_cols=124  Identities=24%  Similarity=0.366  Sum_probs=83.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||.++...............++..|++||.+.+..++.++|||||||+++++++ |..|+....     .....
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-----~~~~~  252 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELF  252 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHH
Confidence            479999999886543211111112234567999999888788999999999999999998 777763211     11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .         .+.....     ...+......+.+++.+||..+|++|||+.+|++.|+++...
T Consensus       253 ~---------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         253 K---------LLKEGHR-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             H---------HHHcCCC-----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            1         0000000     001122345778899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.80  E-value=4.9e-20  Score=125.96  Aligned_cols=125  Identities=22%  Similarity=0.337  Sum_probs=83.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+...... .......
T Consensus       217 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~  295 (343)
T cd05103         217 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRL  295 (343)
T ss_pred             cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHHHH
Confidence            579999999987543322222222345667999999888789999999999999999996 88886432111 0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...            ....     .+......+.+++.+||+.+|++|||+.||+++|+.+.++
T Consensus       296 ~~~------------~~~~-----~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         296 KEG------------TRMR-----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             hcc------------CCCC-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            000            0000     0011223578899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.80  E-value=1.1e-19  Score=120.15  Aligned_cols=123  Identities=20%  Similarity=0.232  Sum_probs=84.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++........  ......++..|++||.+.+..++.++|+||||++++++++|..|+......   ..... 
T Consensus       144 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~-  217 (267)
T cd08229         144 VVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLC-  217 (267)
T ss_pred             CEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHh-
Confidence            478999999887643221  122345788999999998878889999999999999999999997421111   00000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                             ...........     ........+.+++.+||..+|++|||+.+|++.++++.
T Consensus       218 -------~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         218 -------KKIEQCDYPPL-----PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             -------hhhhcCCCCCC-----CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence                   00000000000     01224456888999999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=9.8e-20  Score=126.50  Aligned_cols=136  Identities=18%  Similarity=0.141  Sum_probs=83.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc--cchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK--TNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~--~~~~~~   79 (153)
                      .+||+|||+++...............|++.|+|||++.+..++.++|||||||+++++++|..||.......  ..+...
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i  302 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI  302 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence            479999999987654322222334578999999999988889999999999999999999999985432211  111111


Q ss_pred             hhhhc------cch----hhhhccccchhhhhcchhh-----HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESL------PDR----LTEVVDTNLVREEQNFSAK-----LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~------~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....      +..    +............+.+..+     ......+.+++.+||..+|++|||+.|++.+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            11000      000    0000000000000000000     0123457788999999999999999999987

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=1.2e-19  Score=125.87  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc------cc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK------TN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~------~~   75 (153)
                      .+||+|||+++...... ........||+.|+|||++.+..++.++||||+||+++++++|..|+.......      ..
T Consensus       220 ~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  298 (391)
T PHA03212        220 DVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQ  298 (391)
T ss_pred             CEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHH
Confidence            47999999997543211 112233578999999999988889999999999999999999998764322110      01


Q ss_pred             hHHhhhhhc--cc--------hhhhhc----cccchh--hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESL--PD--------RLTEVV----DTNLVR--EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~--~~--------~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +........  +.        ......    ......  ..+........+.++.+++.+||+.||.+|||++|++++
T Consensus       299 l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        299 IKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             HHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            111111000  00        000000    000000  000000112345578899999999999999999999975

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.80  E-value=7.7e-20  Score=123.61  Aligned_cols=67  Identities=18%  Similarity=0.251  Sum_probs=52.4

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|||+++........ .......|++.|+|||.+.+. .++.++||||+||+++++++|..||..
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            5899999999876533211 122345688999999988764 578999999999999999999999853

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.5e-19  Score=121.17  Aligned_cols=126  Identities=24%  Similarity=0.305  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh--cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++................++..|+|||.+.+..++.++||||||++++++++  +..|+.....  .   ..
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--~---~~  241 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--E---QV  241 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--H---HH
Confidence            579999999986543322222233345778999999888789999999999999999987  4456532111  0   00


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ....     ............  ...+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus       242 ~~~~-----~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         242 IENT-----GEFFRNQGRQIY--LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHH-----HHhhhhcccccc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            0000     000000000000  0001123357889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=5.4e-20  Score=120.99  Aligned_cols=122  Identities=30%  Similarity=0.457  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcc-cccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.......... .....++..|++||.+.+..++.++||||||++++++++ |..||.....  ......
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~  210 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAM  210 (257)
T ss_pred             cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHH
Confidence            479999999987643322111 111123467999999888889999999999999999997 8888753211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .....           .      ...+......+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       211 ~~~~~-----------~------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         211 LESGE-----------R------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHcCC-----------c------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            11000           0      0111223456789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=5.9e-20  Score=129.94  Aligned_cols=116  Identities=20%  Similarity=0.214  Sum_probs=85.6

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      ++|+|||++.....  .......++|||+|||||++.     ..+|++++||||||+++.+|..+.+|...         
T Consensus       169 irLADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe---------  237 (1187)
T KOG0579|consen  169 IRLADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE---------  237 (1187)
T ss_pred             Eeeecccccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc---------
Confidence            68999999865321  123456789999999999764     45799999999999999999999888532         


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              -....++-+.-...++....|......+.+++.+||..+|..||+++|++++
T Consensus       238 --------lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  238 --------LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             --------cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence                    1112222222223333344456677789999999999999999999999986

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.80  E-value=5.3e-20  Score=122.89  Aligned_cols=120  Identities=25%  Similarity=0.372  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||...+..++.++|||||||+++++++ |..|+.....     ....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-----~~~~  242 (288)
T cd05050         168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-----EEVI  242 (288)
T ss_pred             ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence            478999999886543221111222234667999999888889999999999999999997 7777632110     0010


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                              ..........      .+...+..+.+++.+||+.+|.+|||+.|+++.|++
T Consensus       243 --------~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         243 --------YYVRDGNVLS------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             --------HHHhcCCCCC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                    1111111110      112234568889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.79  E-value=9e-20  Score=121.73  Aligned_cols=132  Identities=20%  Similarity=0.179  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|+..|+|||.+.+..++.++||||+||+++++++|..||...... ..+.....
T Consensus       146 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~  221 (288)
T cd07863         146 QVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFD  221 (288)
T ss_pred             CEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHH
Confidence            47999999998764321   223346788999999998888999999999999999999999887432111 11111111


Q ss_pred             h---hccchhhhhc---cccchhhhhc--chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 E---SLPDRLTEVV---DTNLVREEQN--FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~---~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   .....+....   ..........  ..........+.+++.+||+.||++|||+.|++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         222 LIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             HhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0   0000000000   0000000000  00011234567899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.79  E-value=1.3e-19  Score=124.56  Aligned_cols=133  Identities=15%  Similarity=0.077  Sum_probs=82.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++||||+||+++++++|..||...... ..+.....
T Consensus       161 ~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~  236 (359)
T cd07876         161 TLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIE  236 (359)
T ss_pred             CEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            57999999997653221   223346889999999998888999999999999999999999998642211 00111110


Q ss_pred             hhcc----------chhhhhccc--cc-----hhhhhc--c----hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLP----------DRLTEVVDT--NL-----VREEQN--F----SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~----------~~~~~~~~~--~~-----~~~~~~--~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ....          .........  ..     ......  .    .........+.+++.+||..||++|||+.|++++-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence            0000          000000000  00     000000  0    00011234678999999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.79  E-value=9.8e-20  Score=120.41  Aligned_cols=121  Identities=25%  Similarity=0.435  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++........ .........+..|++||.+.+..++.++||||||++++++++ |..|+.....  ......
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~  222 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKA  222 (268)
T ss_pred             cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHH
Confidence            479999999987643221 111111223457999999888788999999999999999987 9988742111  001000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      +.           .. .     ..+...+.+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       223 i~-----------~~-~-----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         223 IN-----------DG-F-----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             Hh-----------cC-C-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            00           00 0     0011122345678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.79  E-value=2.8e-19  Score=118.01  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=84.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++..+....  .......++..|.+||.+.+..++.++|+||||++++++++|..|+.....   .......
T Consensus       144 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~  218 (267)
T cd08224         144 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCK  218 (267)
T ss_pred             cEEEeccceeeeccCCC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHh
Confidence            47899999988764321  112234578889999998887899999999999999999999998743211   1111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .        .......+    .+ .......+.+++.+||..+|++|||+.+|++.|+.++
T Consensus       219 ~--------~~~~~~~~----~~-~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         219 K--------IEKCDYPP----LP-ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             h--------hhcCCCCC----CC-hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            0        00000000    00 0123446778999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.79  E-value=6.4e-20  Score=121.53  Aligned_cols=122  Identities=23%  Similarity=0.375  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|++||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~  228 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYL  228 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHH
Confidence            579999999987643322222222345677999999888788899999999999999998 7777642111  0011110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ..           ....      ..+......+.+++.+||+.+|++|||+.|+++.|++++
T Consensus       229 ~~-----------~~~~------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~  273 (273)
T cd05074         229 IK-----------GNRL------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW  273 (273)
T ss_pred             Hc-----------CCcC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            00           0000      001123357888999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.79  E-value=1e-19  Score=119.64  Aligned_cols=120  Identities=20%  Similarity=0.348  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.+....... ......++..|++||.+.+..++.++|||||||+++++++ |..|+......  .....
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~  212 (257)
T cd05040         135 KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKK  212 (257)
T ss_pred             EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence            47999999998775422211 1123456778999999888889999999999999999998 99887421110  00000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ..        .  ..      .....+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       213 ~~--------~--~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         213 ID--------K--EG------ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HH--------h--cC------CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            00        0  00      000011223456888999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.79  E-value=1.1e-19  Score=123.81  Aligned_cols=125  Identities=22%  Similarity=0.345  Sum_probs=84.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..|+....     .....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~  246 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEELF  246 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHH
Confidence            479999999987643221111222234567999999988889999999999999999998 777764211     11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .        .+.......      .+......+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus       247 ~--------~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         247 K--------LLKEGHRMD------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             H--------HHHcCCCCC------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence            1        000000000      11123456788999999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.79  E-value=6.7e-20  Score=123.30  Aligned_cols=134  Identities=18%  Similarity=0.152  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......+++.|+|||++.+. .++.++||||+||+++++++|..||.........+....
T Consensus       141 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  218 (303)
T cd07869         141 ELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF  218 (303)
T ss_pred             CEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            47999999998653222  122334678999999987653 578899999999999999999999864322111111111


Q ss_pred             hhhc---cchhhhhc-cccchhh------hhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEVV-DTNLVRE------EQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~~-~~~~~~~------~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+.... .......      .....   ........+.+++.+||+.||++|||+.|++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         219 LVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             HHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence            1000   00000000 0000000      00000   000112457789999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.79  E-value=9.2e-20  Score=125.05  Aligned_cols=118  Identities=18%  Similarity=0.251  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+....  .......|+..|++||.+..     ...+.++|||||||+++++++|+.||.....  ..+
T Consensus       206 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~  281 (353)
T PLN00034        206 NVKIADFGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDW  281 (353)
T ss_pred             CEEEcccccceeccccc--ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccH
Confidence            47999999998764321  11233478999999998743     2244689999999999999999999852111  111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ......        ..... .     ...+......+.+++.+||+.+|++|||+.|++++
T Consensus       282 ~~~~~~--------~~~~~-~-----~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        282 ASLMCA--------ICMSQ-P-----PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHH--------HhccC-C-----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111000        00000 0     00112234568899999999999999999999987

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.79  E-value=1.2e-19  Score=124.88  Aligned_cols=132  Identities=15%  Similarity=0.099  Sum_probs=81.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......++..|+|||.+.+..++.++|||||||+++++++|..||....... .......
T Consensus       164 ~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~  239 (364)
T cd07875         164 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIE  239 (364)
T ss_pred             cEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence            58999999998754321   2233468999999999988889999999999999999999999985322110 0000000


Q ss_pred             h---hccc-------hhhhhcccc--c-----hhhhhc------chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 E---SLPD-------RLTEVVDTN--L-----VREEQN------FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~---~~~~-------~~~~~~~~~--~-----~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ..+.       .........  .     ......      ..........+.+++.+||+.||.+|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0   0000       000000000  0     000000      00001123467899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.2e-19  Score=119.54  Aligned_cols=120  Identities=27%  Similarity=0.421  Sum_probs=80.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... .........+..|++||...+..++.++||||||++++++++ |..|+.....  ......+
T Consensus       141 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~  217 (261)
T cd05068         141 ICKVADFGLARVIKEDI-YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQV  217 (261)
T ss_pred             CEEECCcceEEEccCCc-ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence            47999999998865322 111111223457999999888889999999999999999998 8888743110  0000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .            ....     .+.+......+.+++.+||+.+|.+||++.++++.|+++
T Consensus       218 ~------------~~~~-----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         218 D------------QGYR-----MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             H------------cCCC-----CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            0            0000     001122345688899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2.1e-19  Score=124.44  Aligned_cols=112  Identities=21%  Similarity=0.318  Sum_probs=87.2

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +||+|||++..+..+.   ..+..+|+..|.|||++.+..|+ +++||||+|+++|-++.|+.||+.....         
T Consensus       158 VKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------  225 (864)
T KOG4717|consen  158 VKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------  225 (864)
T ss_pred             eEeeeccccccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---------
Confidence            7999999999886544   35556899999999999998777 7799999999999999999999764332         


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          +.+..+.+-++.       .|.....++.+++..||..||++|.+.+|+...
T Consensus       226 ----ETLTmImDCKYt-------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  226 ----ETLTMIMDCKYT-------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             ----hhhhhhhccccc-------CchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence                223333332221       235566788999999999999999999988754

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.79  E-value=1.3e-19  Score=119.17  Aligned_cols=132  Identities=20%  Similarity=0.191  Sum_probs=83.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.++++...  -+..+-|.+|+|||.+.+. .|+...|.||+||++.|++.+.+.|... .+-..+...+
T Consensus       215 ~lKiaDFGLAR~ygsp~k~--~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~-sE~dQl~~If  291 (419)
T KOG0663|consen  215 ILKIADFGLAREYGSPLKP--YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK-SEIDQLDKIF  291 (419)
T ss_pred             cEEecccchhhhhcCCccc--CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC-chHHHHHHHH
Confidence            4799999999999776432  3445679999999998886 6999999999999999999988765421 1111222222


Q ss_pred             hh-hcc--chhhhhccc-----------cchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE-SLP--DRLTEVVDT-----------NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~-~~~--~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. +.+  ..+..+...           ........+.... ......+++...+.+||.+|.|++|.|++
T Consensus       292 ~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  292 KLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             HHhCCCccccCCCccccchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHhhcc
Confidence            11 000  001100000           0000111111111 23556789999999999999999999875

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.79  E-value=1.3e-19  Score=119.14  Aligned_cols=117  Identities=22%  Similarity=0.320  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.++...... ........++..|+|||.+.+..++.++||||||++++++++ |..|+.....  ....   
T Consensus       138 ~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~---  211 (256)
T cd05114         138 VVKVSDFGMTRYVLDDE-YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVV---  211 (256)
T ss_pred             eEEECCCCCccccCCCc-eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHH---
Confidence            57999999988653322 111122234567999999988788999999999999999999 8888743111  0000   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                              ..........      .+......+.+++.+||+.+|++||++.++++.|
T Consensus       212 --------~~i~~~~~~~------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         212 --------EMISRGFRLY------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             --------HHHHCCCCCC------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence                    0010000000      0111234678999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.79  E-value=1e-19  Score=119.83  Aligned_cols=121  Identities=26%  Similarity=0.439  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++......... ......++..|++||.+....++.++||||||++++++++ |..|+......  .....
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~  210 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSF  210 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHH
Confidence            47999999998654332111 1112223567999999887788999999999999999996 88887532110  00001


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ....           . .     ...+.....++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus       211 ~~~~-----------~-~-----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         211 IEQG-----------K-R-----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHCC-----------C-C-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            1000           0 0     011122345788899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.79  E-value=4.2e-20  Score=125.34  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     .... 
T Consensus       133 ~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~-  204 (323)
T cd05571         133 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF-  204 (323)
T ss_pred             CEEEeeCCCCcccccCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHH-
Confidence            47999999987542211  122345689999999999888899999999999999999999999843111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+.....       ..+......+.+++.+||+.||++||     ++.+++++
T Consensus       205 -------~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         205 -------ELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             -------HHHHcCCC-------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence                   00000000       01122345678899999999999999     79998865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.79  E-value=1.4e-19  Score=124.17  Aligned_cols=132  Identities=17%  Similarity=0.142  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++......   ......|++.|+|||.+.+..++.++|||||||+++++++|..||...... ........
T Consensus       157 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~  232 (355)
T cd07874         157 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIE  232 (355)
T ss_pred             CEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            58999999998653321   223456899999999998888999999999999999999999998532110 00000000


Q ss_pred             h---hcc-------chhhhhcccc----------chhh---hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 E---SLP-------DRLTEVVDTN----------LVRE---EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~---~~~-------~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ..+       ..........          ....   .............+.+++.+||..||.+|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            0   000       0000000000          0000   00000011123467899999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.4e-19  Score=118.60  Aligned_cols=119  Identities=29%  Similarity=0.453  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||||++++++++ |..|+......  ..... 
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~-  207 (251)
T cd05041         131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRER-  207 (251)
T ss_pred             cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHH-
Confidence            479999999986542221111112233567999999887789999999999999999998 77776432110  00000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                                 +....     ....+...+..+.+++.+||+.+|.+|||+.||++.|+
T Consensus       208 -----------~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         208 -----------IESGY-----RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             -----------HhcCC-----CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence                       00000     00112233457889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.79  E-value=2.1e-19  Score=119.01  Aligned_cols=123  Identities=21%  Similarity=0.351  Sum_probs=84.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|+|||.+....++.++||||||++++++++ |..||......  ......
T Consensus       145 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~  221 (270)
T cd05056         145 CVKLGDFGLSRYLEDES-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGRI  221 (270)
T ss_pred             CeEEccCceeeeccccc-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHH
Confidence            47999999998764332 111222234567999999887788999999999999999886 98887432111  000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..           ..      ....+...+..+.+++.+|+..+|.+|||+.+++..|+++..+
T Consensus       222 ~~-----------~~------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         222 EN-----------GE------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             Hc-----------CC------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            00           00      0001122345688899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.79  E-value=1e-19  Score=119.82  Aligned_cols=119  Identities=29%  Similarity=0.484  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.+.......  .......++..|++||......++.++||||||++++++++ |..|+.....  ...... 
T Consensus       142 ~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~-  216 (261)
T cd05148         142 VCKVADFGLARLIKEDV--YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQ-  216 (261)
T ss_pred             eEEEccccchhhcCCcc--ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHH-
Confidence            47899999998764322  11223345678999999887788999999999999999998 7888743211  000000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                                ... ...     .+.+...+..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus       217 ----------~~~-~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         217 ----------ITA-GYR-----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             ----------HHh-CCc-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                      000 000     011123345678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.79  E-value=1.3e-19  Score=120.76  Aligned_cols=133  Identities=23%  Similarity=0.370  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcc-cccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......... .....++..|++||.+.+..++.++||||||++++++++|..+......   ......
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~  222 (284)
T cd05081         146 RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMM  222 (284)
T ss_pred             eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhc
Confidence            479999999987643322111 1122234569999999887889999999999999999998655321110   000000


Q ss_pred             hhhcc--ch---hhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLP--DR---LTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .....  ..   +...+..     ....+.+...+..+.+++.+||+.+|++|||+.||++.|+.++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~  284 (284)
T cd05081         223 GNDKQGQMIVYHLIELLKN-----NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR  284 (284)
T ss_pred             ccccccccchHHHHHHHhc-----CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence            00000  00   0000100     0011112234457889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.78  E-value=1.6e-19  Score=121.13  Aligned_cols=117  Identities=15%  Similarity=0.167  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......+++.|++||.+.+..++.++|||||||+++++++|..||.......    ....
T Consensus       154 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~  227 (296)
T cd06654         154 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYL  227 (296)
T ss_pred             CEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHH
Confidence            579999999886543221  1223467889999999888788899999999999999999999985321110    0000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        ....     .+....+......+.+++.+||..+|++||++.+++++
T Consensus       228 ~--------~~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         228 I--------ATNG-----TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             H--------hcCC-----CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            0        0000     00001112234567889999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.78  E-value=1.6e-19  Score=118.59  Aligned_cols=117  Identities=20%  Similarity=0.259  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......++..|++||.+.+..++.++||||||++++++++|..|+..........     
T Consensus       137 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-----  209 (256)
T cd06612         137 QAKLADFGVSGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-----  209 (256)
T ss_pred             cEEEcccccchhcccCc--cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-----
Confidence            47899999998764322  12223457888999999888888999999999999999999999975321111000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              . ....   .......+......+.+++.+||+.+|++|||+.||+++
T Consensus       210 --------~-~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         210 --------M-IPNK---PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             --------h-hccC---CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence                    0 0000   000011112234567889999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.78  E-value=1.2e-19  Score=120.26  Aligned_cols=119  Identities=25%  Similarity=0.359  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++......   ........+..|++||.+.+..++.++||||||++++++++ |..||....     .....
T Consensus       150 ~~kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~  221 (270)
T cd05047         150 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELY  221 (270)
T ss_pred             eEEECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHH
Confidence            4789999998643211   11111223567999999887788999999999999999996 888874311     11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ..        .... ..     ...+......+.+++.+||..+|.+|||+.++++.|+++.
T Consensus       222 ~~--------~~~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         222 EK--------LPQG-YR-----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HH--------HhCC-CC-----CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            10        0000 00     0001122346789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.78  E-value=1.5e-19  Score=123.14  Aligned_cols=63  Identities=27%  Similarity=0.394  Sum_probs=51.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||++......    ......|+..|+|||.+.+..++.++|||||||+++++++|..||..
T Consensus       142 ~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            4799999998765322    12234688899999999888889999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.78  E-value=3.3e-19  Score=117.66  Aligned_cols=120  Identities=28%  Similarity=0.442  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.++.+...... ......++..|++||...+..++.++||||||++++++++ |..|+......  ..   .
T Consensus       140 ~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~~---~  213 (262)
T cd05071         140 VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV---L  213 (262)
T ss_pred             cEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--HH---H
Confidence            4789999999876433211 1122345678999999887789999999999999999998 77776432110  00   0


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                              ...... .     ..+.....+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus       214 --------~~~~~~-~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         214 --------DQVERG-Y-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             --------HHHhcC-C-----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence                    000000 0     0011223455688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.78  E-value=1.5e-19  Score=121.64  Aligned_cols=122  Identities=25%  Similarity=0.334  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......++..|++||...+..++.++||||||++++++++ |..||.....     ....
T Consensus       162 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~  233 (303)
T cd05088         162 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELY  233 (303)
T ss_pred             cEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHHH
Confidence            57999999986432111   1111234567999998887788899999999999999997 8888742111     0111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ..        .... ...     ..+......+.+++.+||+.+|++||++.++++.|+.+...-
T Consensus       234 ~~--------~~~~-~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         234 EK--------LPQG-YRL-----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             HH--------HhcC-CcC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            00        0000 000     001112345788999999999999999999999999877654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.78  E-value=1.5e-19  Score=119.69  Aligned_cols=116  Identities=19%  Similarity=0.229  Sum_probs=77.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++.......  .......|+..|++||++.     +..++.++|+|||||+++++++|..|+......    
T Consensus       149 ~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----  222 (272)
T cd06637         149 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----  222 (272)
T ss_pred             CEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----
Confidence            47999999998754321  1223456888999999875     235788999999999999999999987432110    


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....      .........        ........+.+++.+||+.+|.+|||+.|++.+
T Consensus       223 ~~~~~------~~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         223 RALFL------IPRNPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             HHHHH------HhcCCCCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            00000      000000000        001233467889999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2.2e-19  Score=118.37  Aligned_cols=118  Identities=21%  Similarity=0.159  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCcc-cccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......... .....++..|+|||.+.+..++.++||||+|++++++++|..||.....    .....
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~  217 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIF  217 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHH
Confidence            479999999986543211111 1234577899999999888889999999999999999999999743111    00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .         .......     ...+......+.+++.+||..+|.+|||+.|++++
T Consensus       218 ~---------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         218 K---------IATQPTN-----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             H---------HhccCCC-----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            0         0000000     00112234467889999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.78  E-value=1.9e-19  Score=118.29  Aligned_cols=119  Identities=29%  Similarity=0.417  Sum_probs=82.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.+................++..|+|||......++.++||||+|++++++++ |..|+....  .....   
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~---  217 (262)
T cd00192         143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--NEEVL---  217 (262)
T ss_pred             cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--HHHHH---
Confidence            479999999987754322222334456788999999887788999999999999999998 588875421  00010   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                              ........      ...+......+.+++.+||..+|++|||+.|++++|+
T Consensus       218 --------~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         218 --------EYLRKGYR------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --------HHHHcCCC------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                    11111000      0111233567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.78  E-value=1.7e-19  Score=120.10  Aligned_cols=117  Identities=19%  Similarity=0.184  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++.......  .......++..|++||.+.     +..++.++|+|||||+++++++|..|+...... ...
T Consensus       141 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~  217 (282)
T cd06643         141 DIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-RVL  217 (282)
T ss_pred             CEEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-HHH
Confidence            47999999987653221  1223346888999999874     335778999999999999999999987532110 000


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....    .     ...       ....+......+.+++.+||+.+|.+||++.+++++
T Consensus       218 ~~~~~----~-----~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         218 LKIAK----S-----EPP-------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             HHHhh----c-----CCC-------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00000    0     000       001112234567899999999999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.78  E-value=1.4e-19  Score=118.95  Aligned_cols=116  Identities=26%  Similarity=0.391  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......     ....++..|++||.+.+..++.++|||||||+++++++ |..|+....     .....
T Consensus       140 ~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~  209 (256)
T cd05082         140 VAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVV  209 (256)
T ss_pred             cEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHH
Confidence            47999999988653221     12234567999999888788999999999999999997 888864211     11110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..         +.....     ...+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       210 ~~---------~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         210 PR---------VEKGYK-----MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HH---------HhcCCC-----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            00         000000     001123345678899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.78  E-value=3e-19  Score=119.41  Aligned_cols=132  Identities=14%  Similarity=0.094  Sum_probs=79.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......+++.|+|||.+.+ ..++.++||||+||+++++++|..||....... .+....
T Consensus       141 ~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~  217 (288)
T cd07871         141 ELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIF  217 (288)
T ss_pred             CEEECcCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence            57999999998653222  12233467889999998765 468899999999999999999999985322111 011110


Q ss_pred             h---hhccchhhhh---------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEV---------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+...         ..+....... .........++.+++.+||+.||.+|||++|++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         218 RLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL-INHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             HHhCCCChHHhhccccchhhhccccCccCCCch-HHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0   0001111110         0000000000 00001123457789999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=9.8e-20  Score=123.01  Aligned_cols=114  Identities=19%  Similarity=0.202  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||....     ..... 
T Consensus       131 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~-  202 (312)
T cd05585         131 HIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMY-  202 (312)
T ss_pred             cEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHH-
Confidence            47999999998643221  12234568999999999988889999999999999999999999985311     11111 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC---HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC---MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~evl~~  137 (153)
                             .......       ...+......+.+++.+||+.+|.+||+   +.|++.+
T Consensus       203 -------~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         203 -------RKILQEP-------LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             -------HHHHcCC-------CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence                   1111110       0111223456788999999999999975   6777665

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.78  E-value=2.5e-19  Score=118.02  Aligned_cols=119  Identities=28%  Similarity=0.462  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++..+...... ......++..|+|||...+..++.++|+||||++++++++ |..||.....  .......
T Consensus       140 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~  216 (260)
T cd05070         140 VCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQV  216 (260)
T ss_pred             eEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence            4789999999876433211 1112235567999999887788999999999999999998 7888743211  0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      .           .. ..     .+.+......+.+++.+||..+|++|||+.++...|+.
T Consensus       217 ~-----------~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         217 E-----------RG-YR-----MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             H-----------cC-CC-----CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            0           00 00     01112334568899999999999999999999988874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.78  E-value=1.9e-19  Score=118.99  Aligned_cols=120  Identities=22%  Similarity=0.268  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++|++|||.+....... ........++..|+|||.+.+..++.++|||||||+++++++ |..||......  ...   
T Consensus       145 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~---  218 (266)
T cd05064         145 VCKISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVI---  218 (266)
T ss_pred             cEEECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHH---
Confidence            57899999876542211 111112234678999999888889999999999999999774 98887432110  000   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                              ..+.+...      .+.+...+..+.+++.+||+.+|.+||++.|+++.|.++
T Consensus       219 --------~~~~~~~~------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         219 --------KAVEDGFR------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             --------HHHHCCCC------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                    00100000      011233455688899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.78  E-value=1.5e-19  Score=120.74  Aligned_cols=119  Identities=22%  Similarity=0.244  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC---CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG---IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++......   ......|+..|++||.+.+.   .++.++||||+|++++++++|..||....    ....
T Consensus       146 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~  218 (288)
T cd06616         146 NIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFD  218 (288)
T ss_pred             cEEEeecchhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHH
Confidence            47899999997654321   12233578889999988765   68899999999999999999999975321    0000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .........     .+....     .........+.+++.+||+.+|++|||+.+|+.+
T Consensus       219 ~~~~~~~~~-----~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         219 QLTQVVKGD-----PPILSN-----SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHhhhcCCC-----CCcCCC-----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000000000     000000     0011234568899999999999999999999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.78  E-value=1.4e-19  Score=119.02  Aligned_cols=118  Identities=19%  Similarity=0.282  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++....+. ........++..|++||...+..++.++||||||++++++++ |..|+.....  ....   
T Consensus       138 ~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~---  211 (256)
T cd05113         138 CVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETV---  211 (256)
T ss_pred             CEEECCCccceecCCCc-eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHH---
Confidence            58999999998764332 111112235667999999987788999999999999999998 8888743111  0000   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                              ....... ...     .+......+.+++.+||+.+|.+||++.+++..|+
T Consensus       212 --------~~~~~~~-~~~-----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         212 --------EKVSQGL-RLY-----RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             --------HHHhcCC-CCC-----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                    0010000 000     01112356788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.78  E-value=2.2e-19  Score=118.11  Aligned_cols=117  Identities=25%  Similarity=0.365  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|++||.+.+..++.++|+||||++++++++ |..|+.....  .......
T Consensus       138 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~  214 (256)
T cd05059         138 VVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVVESV  214 (256)
T ss_pred             cEEECCcccceeccccc-ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHH
Confidence            47999999998754321 111111223457999999988889999999999999999998 7888743111  1010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ...            ..     ...+...+..+.+++.+||..+|++|||+.|+++.|
T Consensus       215 ~~~------------~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         215 SAG------------YR-----LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HcC------------Cc-----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            000            00     011122345688999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=1.7e-19  Score=120.06  Aligned_cols=136  Identities=24%  Similarity=0.347  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCcc-cccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........... .....++..|.+||...+..++.++||||||++++++++|..|+..............
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  226 (284)
T cd05038         147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA  226 (284)
T ss_pred             CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence            579999999987753322111 1122345679999988877888999999999999999999988643221110000000


Q ss_pred             -hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 -SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                       ...........+...     ...+.+...+..+.+++.+||+.+|++|||+.||++.|+.++
T Consensus       227 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~  284 (284)
T cd05038         227 QGQMIVTRLLELLKEG-----ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR  284 (284)
T ss_pred             cccccHHHHHHHHHcC-----CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence             000000000011000     011112233467889999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.78  E-value=1.6e-18  Score=132.06  Aligned_cols=116  Identities=24%  Similarity=0.467  Sum_probs=84.2

Q ss_pred             cccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhcc-chhhhhccccchhhhhcchh
Q 043099           27 MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLP-DRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        27 ~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+++.|+|||++.+..++.++|||||||++||+++|+.|+............+...... .......++.+...   ...
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  915 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD---VSV  915 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC---CCc
Confidence            57889999999988889999999999999999999999986544444444444433221 11222233332211   112


Q ss_pred             hHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099          106 KLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      +.+...++.+++.+||+.+|++||||.||++.|+++.+..
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            2445667889999999999999999999999999987744

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.78  E-value=1.7e-19  Score=126.08  Aligned_cols=129  Identities=24%  Similarity=0.315  Sum_probs=93.0

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh--cCCCCCccCCCccchHH
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--KKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~   78 (153)
                      |++||+|||+++.+-....+..++..+-+..|+|+|.+.-.+++.++|||+||+++||+++  ...|+.....+      
T Consensus       674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e------  747 (807)
T KOG1094|consen  674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE------  747 (807)
T ss_pred             ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH------
Confidence            6899999999997666655666677788899999998888899999999999999999885  55676431111      


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                          ..-+....+++..-...  -.+.|.-++.++.++|++||..+.++||++++|...|++.
T Consensus       748 ----~vven~~~~~~~~~~~~--~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  748 ----QVVENAGEFFRDQGRQV--VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ----HHHHhhhhhcCCCCcce--eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                00011111111111111  1223456778899999999999999999999999988764

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.2e-19  Score=123.66  Aligned_cols=119  Identities=16%  Similarity=0.148  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++....     ......|++.|+|||.+.+..++.++||||+||+++++++|..||....... ... ...
T Consensus       139 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~-~i~  211 (333)
T cd05600         139 HIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWE-NLK  211 (333)
T ss_pred             CEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHH-HHH
Confidence            579999999986532     2233468999999999988889999999999999999999999985321100 000 000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..     .........     .........++.+++.+||..+|.+||++.|++++
T Consensus       212 ~~-----~~~~~~~~~-----~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         212 YW-----KETLQRPVY-----DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             hc-----cccccCCCC-----CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            00     000000000     00001234567889999999999999999999987

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.77  E-value=3.8e-19  Score=117.20  Aligned_cols=119  Identities=25%  Similarity=0.411  Sum_probs=81.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ ......++..|++||...+..++.++||||||++++++++ |..|+......     ...
T Consensus       140 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~  213 (260)
T cd05069         140 VCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVL  213 (260)
T ss_pred             eEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence            4799999999876432211 1112235677999999887788999999999999999998 88887431110     000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                              ...... ..     .+.+...+..+.+++.+||..+|.+||++.+|++.|++
T Consensus       214 --------~~~~~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         214 --------EQVERG-YR-----MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             --------HHHHcC-CC-----CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                    000000 00     01112344568889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=2.8e-19  Score=118.90  Aligned_cols=124  Identities=23%  Similarity=0.363  Sum_probs=83.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||......++.++|+||||++++++++ |..|+.....  ..+...+
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~  224 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLL  224 (279)
T ss_pred             eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHH
Confidence            479999999987653322222222234567999999887788999999999999999998 8888743111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                                 ........      +......+.+++.+||..+|.+||++.++++.|+++.+.
T Consensus       225 -----------~~~~~~~~------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         225 -----------EKGERLPQ------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             -----------hCCCCCCC------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence                       00000011      111224577889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=3.8e-19  Score=122.20  Aligned_cols=62  Identities=19%  Similarity=0.234  Sum_probs=48.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPT   66 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~   66 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++|||||||++++++++..++
T Consensus       195 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        195 QVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CEEEecCccccccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            47999999997543221   122346899999999998888999999999999999999865554

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.77  E-value=3.6e-19  Score=117.79  Aligned_cols=117  Identities=21%  Similarity=0.257  Sum_probs=81.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......++..|++||.+.+..++.++|+||||++++++++|..|+....     ..... 
T Consensus       152 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~~~~-  222 (269)
T cd08528         152 KVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----MLSLA-  222 (269)
T ss_pred             cEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HHHHH-
Confidence            47999999998764332   2234467889999999988788999999999999999999999874211     00000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                             ............     .......+.+++.+||+.+|++||++.||..++.
T Consensus       223 -------~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         223 -------TKIVEAVYEPLP-----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             -------HHHhhccCCcCC-----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                   000000000000     0112346788999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.77  E-value=4.1e-19  Score=116.60  Aligned_cols=115  Identities=20%  Similarity=0.262  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.......  ......|++.|++||+..+..++.++|+||||++++++++|..|+.....  ..   .  
T Consensus       139 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~---~--  209 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GA---L--  209 (256)
T ss_pred             CEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HH---H--
Confidence            478999999987654321  12234578899999999888889999999999999999999999753210  00   0  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...........      .+......+.+++.+||+.+|++||++.+++++
T Consensus       210 ------~~~~~~~~~~~------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         210 ------ILKIIRGVFPP------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             ------HHHHHcCCCCC------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                  01111110000      011234568889999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.77  E-value=2.8e-19  Score=117.07  Aligned_cols=118  Identities=28%  Similarity=0.401  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++....... ........++..|++||.+.+..++.++||||||++++++++ |..||......  ......
T Consensus       131 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~  207 (250)
T cd05085         131 VLKISDFGMSRQEDDGI-YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQV  207 (250)
T ss_pred             eEEECCCccceeccccc-cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHH
Confidence            47999999997643322 111122234567999999888788999999999999999998 88887432110  000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...            ..     ...+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus       208 ~~~------------~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         208 EKG------------YR-----MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HcC------------CC-----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            000            00     0011223456888999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.77  E-value=3e-19  Score=119.33  Aligned_cols=122  Identities=21%  Similarity=0.336  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|++||.+.+..++.++|||||||+++++++ |..|+.....     ....
T Consensus       157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~  231 (288)
T cd05061         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVL  231 (288)
T ss_pred             cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence            579999999986543221111222345677999999888888999999999999999998 6777642111     0110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                              ...........      +......+.+++.+||+.+|++|||+.++++.|++..
T Consensus       232 --------~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         232 --------KFVMDGGYLDQ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             --------HHHHcCCCCCC------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence                    00111100000      1122356889999999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.77  E-value=2.9e-19  Score=119.92  Aligned_cols=117  Identities=15%  Similarity=0.183  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......++..|++||.+.+..++.++|||||||+++++++|..||......    .....
T Consensus       153 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~~  226 (296)
T cd06655         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYL  226 (296)
T ss_pred             CEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH
Confidence            478999999886543321  122346788999999998878899999999999999999999997432110    00000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ....    .......+......+.+++.+||..+|.+||++.+++++
T Consensus       227 ---------~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         227 ---------IATN----GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             ---------HHhc----CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                     0000    000011112234467789999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.77  E-value=1.9e-19  Score=122.44  Aligned_cols=114  Identities=16%  Similarity=0.165  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     .....
T Consensus       133 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~  205 (328)
T cd05593         133 HIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFE  205 (328)
T ss_pred             cEEEecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHH
Confidence            47999999987643221  122335689999999999888899999999999999999999999853111     00000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                              ......       ...+......+.+++.+||+.+|.+|+     ++.|++++
T Consensus       206 --------~~~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         206 --------LILMED-------IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             --------HhccCC-------ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence                    000000       001112334678899999999999997     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.77  E-value=3.2e-19  Score=121.92  Aligned_cols=130  Identities=18%  Similarity=0.196  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....|++.|+|||.+.+ ..++.++||||+||+++++++|..||...... ..+....
T Consensus       156 ~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~  229 (343)
T cd07878         156 ELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIM  229 (343)
T ss_pred             CEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence            5799999999875422     223468899999999876 46889999999999999999999997532110 0011111


Q ss_pred             hh---hccchhhhhcccc---chhhhhcchhh------HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEVVDTN---LVREEQNFSAK------LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ........+....   .....+..+..      ......+.+++.+||+.||.+|||+.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         230 EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00   0000000000000   00000000000      0112346789999999999999999999987

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.77  E-value=1.2e-19  Score=123.51  Aligned_cols=119  Identities=19%  Similarity=0.167  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+..... .......|++.|+|||.+.+. .++.++|||||||+++++++|..||........ .....
T Consensus       143 ~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~  220 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVS  220 (332)
T ss_pred             CEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHH
Confidence            579999999986543221 122335689999999998765 478899999999999999999999853221111 00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                      .        ......     .  ..+......+.+++.+||+.||++||     ++.+++++
T Consensus       221 ~--------~~~~~~-----~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         221 R--------RILKCD-----P--PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             H--------HHhcCC-----C--CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            0        000000     0  01112334677899999999999999     77788865

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.77  E-value=4.9e-19  Score=118.75  Aligned_cols=126  Identities=24%  Similarity=0.313  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh--cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT--KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.+.........+...++..|++||...+..++.++|||||||+++++++  |..|+.....  ......
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~--~~~~~~  245 (296)
T cd05095         168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD--EQVIEN  245 (296)
T ss_pred             CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--HHHHHH
Confidence            478999999986543221111222344677999998777789999999999999999998  5667642111  000000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ....    .........      .+.+...+..+.+++.+||+.+|++||++.||++.|+
T Consensus       246 ~~~~----~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         246 TGEF----FRDQGRQVY------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHH----Hhhcccccc------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            0000    000000000      0111223356889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=8.5e-19  Score=123.60  Aligned_cols=136  Identities=14%  Similarity=0.125  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCC--c----cc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG--K----TN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~--~----~~   75 (153)
                      .+||+|||+++...............||+.|++||++.+..++.++|||||||+++|+++|..++......  .    ..
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~  377 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ  377 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence            47999999998764332222223356899999999998888999999999999999999887654321111  0    01


Q ss_pred             hHHhhhhhcc--chhhhh----ccccchhh-----hh--cchhh---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESLP--DRLTEV----VDTNLVRE-----EQ--NFSAK---LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~~--~~~~~~----~~~~~~~~-----~~--~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +...+.....  ......    +.......     ..  .....   ......+.+++.+||+.||.+|||+.|||++
T Consensus       378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1111111000  000000    00000000     00  00000   0122357789999999999999999999986

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.77  E-value=2.6e-19  Score=121.51  Aligned_cols=114  Identities=18%  Similarity=0.200  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       138 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~--  208 (323)
T cd05584         138 HVKLTDFGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKT--  208 (323)
T ss_pred             CEEEeeCcCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHH--
Confidence            57999999987543221  122334689999999999888889999999999999999999999853111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||+.+|++||     ++.+++++
T Consensus       209 ------~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         209 ------IDKILKGKL-------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             ------HHHHHcCCC-------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence                  111111110       01112334678899999999999999     88888775

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.77  E-value=1.8e-19  Score=124.36  Aligned_cols=134  Identities=17%  Similarity=0.193  Sum_probs=81.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+. .++.++||||+||+++++++|+.||...... ..+....
T Consensus       141 ~~kL~Dfg~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~  218 (372)
T cd07853         141 VLKICDFGLARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLIT  218 (372)
T ss_pred             CEEeccccceeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHH
Confidence            58999999998754322 1122334678899999988764 5788999999999999999999998542211 0010000


Q ss_pred             ---hhhccchh-------h-hhccccchh--hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 ---SESLPDRL-------T-EVVDTNLVR--EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ---~~~~~~~~-------~-~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         ........       . .+.......  ..............+.+++.+||+.||.+|||+.|++++
T Consensus       219 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         219 DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence               00000000       0 000000000  000000111224567899999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.77  E-value=4.6e-19  Score=118.21  Aligned_cols=135  Identities=19%  Similarity=0.287  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++++++++..|.......   .....
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~  223 (284)
T cd05079         147 QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMI  223 (284)
T ss_pred             CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhc
Confidence            4799999999876433211 1122345667899999988778889999999999999999976553211100   00000


Q ss_pred             hhhc-cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESL-PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .... .......+..  .......+.+......+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       224 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         224 GPTHGQMTVTRLVRV--LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ccccccccHHHHHHH--HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            0000 0000000000  000000111122345788999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=2.4e-19  Score=125.75  Aligned_cols=112  Identities=21%  Similarity=0.280  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||.+....      .-+.++|||+|||||++..   +.|+-++||||+||+..|+..+++|..+...- ..+  
T Consensus       164 ~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SAL--  234 (948)
T KOG0577|consen  164 LVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SAL--  234 (948)
T ss_pred             eeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHH--
Confidence            47999999998753      3456799999999998764   36999999999999999999999997542110 000  


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                ..+..    .+++.. ...+....+..++..||+.-|.+|||+++++.+
T Consensus       235 ----------YHIAQ----NesPtL-qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  235 ----------YHIAQ----NESPTL-QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             ----------HHHHh----cCCCCC-CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence                      00000    000111 125677788899999999999999999999876

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.77  E-value=2.8e-19  Score=119.07  Aligned_cols=118  Identities=17%  Similarity=0.222  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++..+.....  ......|++.|+|||.+.+..++.++|||||||+++++++|..||........ ....  
T Consensus       135 ~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~--  209 (280)
T cd05608         135 NVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKEL--  209 (280)
T ss_pred             CEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHH--
Confidence            478999999987643321  22334688999999999888899999999999999999999999853211100 0000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ........       ...+......+.+++.+||+.+|++||     ++++++++
T Consensus       210 ------~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         210 ------KQRILNDS-------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             ------HHhhcccC-------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence                  00011000       011122345678899999999999999     77888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.77  E-value=1.5e-19  Score=121.18  Aligned_cols=64  Identities=30%  Similarity=0.486  Sum_probs=56.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+|+.+....   .....+|++.|||||++..++|+.|+|+||.|+++|++++|+.||..
T Consensus       153 ~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  153 VLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             eEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            58999999999986432   34456899999999999988999999999999999999999999864

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.77  E-value=4.9e-19  Score=116.64  Aligned_cols=119  Identities=24%  Similarity=0.397  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||++....... ........++..|++||.+....++.++||||||++++++++ |..||....  ........
T Consensus       140 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~  216 (260)
T cd05067         140 CCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNL  216 (260)
T ss_pred             CEEEccCcceeecCCCC-cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHH
Confidence            47899999998764222 111222345678999999888788999999999999999998 888875311  11111000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      ..            ...     .+.+...+..+.+++.+||+.+|++||++++++..|+.
T Consensus       217 ~~------------~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         217 ER------------GYR-----MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             Hc------------CCC-----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            00            000     00112233468899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.77  E-value=3.4e-19  Score=120.99  Aligned_cols=114  Identities=17%  Similarity=0.164  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||.....     .... 
T Consensus       139 ~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~-  210 (324)
T cd05589         139 FVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVF-  210 (324)
T ss_pred             cEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHH-
Confidence            47999999987543211  123345789999999999888899999999999999999999999853111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+......       .+......+.+++.+||+.+|.+||     ++.+++++
T Consensus       211 -------~~i~~~~~~-------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         211 -------DSIVNDEVR-------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             -------HHHHhCCCC-------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence                   011110000       1112334577899999999999999     57777665

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=4.2e-19  Score=118.40  Aligned_cols=131  Identities=20%  Similarity=0.233  Sum_probs=84.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|||++.......    .....|+..|++||.+.+..++.++|||||||+++++++|..||..........     
T Consensus       142 ~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~-----  212 (284)
T cd06620         142 QIKLCDFGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ-----  212 (284)
T ss_pred             cEEEccCCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh-----
Confidence            47899999987653221    223468889999999887788899999999999999999999986432211000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                       .....................+ ....+..+.+++.+||+.+|.+|||+.||+++..-+..
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         213 -DDPMGILDLLQQIVQEPPPRLP-SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             -hhhhHHHHHHHHHhhccCCCCC-chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence             0000000111000000001110 11244568889999999999999999999998655443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.76  E-value=2.4e-19  Score=121.49  Aligned_cols=114  Identities=18%  Similarity=0.187  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~--  204 (320)
T cd05590         134 HCKLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDL--  204 (320)
T ss_pred             cEEEeeCCCCeecCcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHH--
Confidence            47999999987643221  123345689999999999888899999999999999999999999853111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM------TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~~  137 (153)
                            ...+......       .+......+.+++.+||+.||.+||++      ++++++
T Consensus       205 ------~~~i~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         205 ------FEAILNDEVV-------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             ------HHHHhcCCCC-------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence                  0111111000       011233467889999999999999998      666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=1.8e-18  Score=115.11  Aligned_cols=121  Identities=22%  Similarity=0.284  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......    ......|+..|++||.+.+..++.++|+||||++++++++|..||............   
T Consensus       133 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~---  205 (279)
T cd06619         133 QVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP---  205 (279)
T ss_pred             CEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch---
Confidence            4799999999875432    123346888999999998888999999999999999999999998542221110000   


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         ............ ..   .+ .......+.+++.+||+.+|.+||++.|++++
T Consensus       206 ---~~~~~~~~~~~~-~~---~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         206 ---LQLLQCIVDEDP-PV---LP-VGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ---HHHHHHHhccCC-CC---CC-CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence               000000000000 00   00 01123457889999999999999999999887

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=6.8e-19  Score=117.73  Aligned_cols=117  Identities=20%  Similarity=0.235  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-----CccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-----IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-----~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.......  ......|+..|++||.+...     .++.++|||||||+++++++|..|+......    
T Consensus       166 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----  239 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----  239 (291)
T ss_pred             CEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----
Confidence            479999999887543211  12234578889999987542     3678999999999999999999997532110    


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....         ....    .......+......+.+++.+||+.+|++||++.|++++
T Consensus       240 ~~~~~---------~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         240 KTLFK---------IPRN----PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHHH---------HhcC----CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            00000         0000    000001112233468889999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.76  E-value=2.3e-18  Score=114.45  Aligned_cols=115  Identities=17%  Similarity=0.246  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......  .......++..|.+||.+.+..++.++|+||||++++++++|..|+......  ....   
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~---  211 (277)
T cd06640         139 DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--RVLF---  211 (277)
T ss_pred             CEEEcccccceeccCCc--cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--hHhh---
Confidence            47899999998764322  1122345788899999988878899999999999999999999987532110  0000   


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ....   ...+  ......+..+.+++.+||+.+|++||++.+++++
T Consensus       212 ---------~~~~---~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         212 ---------LIPK---NNPP--TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             ---------hhhc---CCCC--CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence                     0000   0000  1113345678899999999999999999999888

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.76  E-value=4.1e-19  Score=120.19  Aligned_cols=113  Identities=19%  Similarity=0.209  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||.....     .... 
T Consensus       134 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~-  205 (316)
T cd05592         134 HIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELF-  205 (316)
T ss_pred             CEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHH-
Confidence            47999999998653222  123345689999999999888899999999999999999999999853211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT-DAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  136 (153)
                             ..+...     .+.  .+......+.+++.+||+.+|++||++. ++++
T Consensus       206 -------~~i~~~-----~~~--~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         206 -------DSILND-----RPH--FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             -------HHHHcC-----CCC--CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence                   000000     000  0112234567899999999999999975 5554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.76  E-value=5.5e-19  Score=117.67  Aligned_cols=116  Identities=17%  Similarity=0.216  Sum_probs=76.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .++|+|||++.......  .......|++.|+|||.+.     ...++.++|+||||++++++++|..||........ .
T Consensus       159 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~  235 (282)
T cd06636         159 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-L  235 (282)
T ss_pred             CEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-h
Confidence            47899999987653221  1223346888999999875     34578899999999999999999999743211000 0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . .        .........        ........+.+++.+||+.+|.+||++.|++++
T Consensus       236 ~-~--------~~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         236 F-L--------IPRNPPPKL--------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             h-h--------HhhCCCCCC--------cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            0 0        000000000        001234568899999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.76  E-value=2.7e-19  Score=121.31  Aligned_cols=114  Identities=17%  Similarity=0.198  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       134 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~--  204 (321)
T cd05591         134 HCKLADFGMCKEGILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDL--  204 (321)
T ss_pred             CEEEeecccceecccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHH--
Confidence            57999999998643221  122345689999999999888899999999999999999999999853211     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-------CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-------CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~evl~~  137 (153)
                            ...+......       .+.....++.+++.+||+.+|++|+       ++.+++++
T Consensus       205 ------~~~i~~~~~~-------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         205 ------FESILHDDVL-------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             ------HHHHHcCCCC-------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence                  0111111000       0111234677899999999999999       88888866

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.76  E-value=9.7e-19  Score=116.65  Aligned_cols=118  Identities=19%  Similarity=0.280  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++......  .......|++.|+|||.+..     ..++.++||||+||+++++++|..|+.....    .
T Consensus       162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~  235 (286)
T cd06638         162 GVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----M  235 (286)
T ss_pred             CEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----h
Confidence            47899999998764321  12223468899999998742     3578899999999999999999998753211    0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ....         .....    .......+......+.+++.+||+.+|++|||+.||++++
T Consensus       236 ~~~~---------~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         236 RALF---------KIPRN----PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             HHHh---------hcccc----CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            0000         00000    0000000111234578899999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.76  E-value=1e-18  Score=115.20  Aligned_cols=119  Identities=24%  Similarity=0.422  Sum_probs=81.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.+..+.... ........++..|++||.+....++.++|+||||++++++++ |..|+.....  .......
T Consensus       140 ~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~  216 (260)
T cd05073         140 VCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRAL  216 (260)
T ss_pred             cEEECCCcceeeccCCC-cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence            57999999998764322 111222335667999999887788999999999999999998 8888743110  0011000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      ...            ..     .+.+...+..+.+++.+||+.+|++||++.+++..|+.
T Consensus       217 ~~~------------~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         217 ERG------------YR-----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             hCC------------CC-----CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            000            00     00112234568889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.76  E-value=8.5e-19  Score=116.05  Aligned_cols=123  Identities=20%  Similarity=0.257  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-------CccccccchhhhHHHHHHHh-cCCCCCccCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-------IVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-------~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~   73 (153)
                      ++||+|||+++...............++..|+|||++.+.       .++.++|+||||++++++++ |..||.......
T Consensus       138 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  217 (269)
T cd05087         138 TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ  217 (269)
T ss_pred             cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH
Confidence            5799999999764332211122234567789999987532       35788999999999999996 988875321110


Q ss_pred             cchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           74 TNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                       ... .   ...........+...         ......+.+++..|| .+|++|||+.||+..|.
T Consensus       218 -~~~-~---~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         218 -VLT-Y---TVREQQLKLPKPRLK---------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             -HHH-H---HhhcccCCCCCCccC---------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence             000 0   000000001111000         112234677888898 68999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.76  E-value=3.4e-19  Score=120.96  Aligned_cols=114  Identities=17%  Similarity=0.158  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||......     ... 
T Consensus       133 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~-  204 (323)
T cd05595         133 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLF-  204 (323)
T ss_pred             CEEecccHHhccccCCC--CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHH-
Confidence            47999999987542221  1223356899999999998888999999999999999999999997531110     000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ........       ..+......+.+++.+||+.+|++|+     ++.+++++
T Consensus       205 -------~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         205 -------ELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             -------HHHhcCCC-------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence                   00000000       00112334677899999999999998     89998875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9.8e-19  Score=116.01  Aligned_cols=116  Identities=16%  Similarity=0.207  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||+++......  .......++..|++||.+.+..++.++|+||||++++++++|..|+.....  ........
T Consensus       136 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~  211 (274)
T cd06609         136 DVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--MRVLFLIP  211 (274)
T ss_pred             CEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--HHHHHHhh
Confidence            47899999998875331  122334678889999999887899999999999999999999999753211  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ....       +.... ......+.+++.+||..+|++|||+++++++
T Consensus       212 --------~~~~-------~~~~~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         212 --------KNNP-------PSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             --------hcCC-------CCCcc-cccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                    0000       00000 0033457789999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.76  E-value=7.7e-19  Score=117.90  Aligned_cols=117  Identities=14%  Similarity=0.169  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......+++.|++||.+.+..++.++|+||||++++++++|..||..........     
T Consensus       153 ~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-----  225 (297)
T cd06656         153 SVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----  225 (297)
T ss_pred             CEEECcCccceEccCCc--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-----
Confidence            47999999998754332  11233467889999999988888999999999999999999999985321110000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ...    ....+....+......+.+++.+||..+|++||++.+++++
T Consensus       226 --------~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         226 --------LIA----TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             --------eec----cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    000    00000001112233457789999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=6.4e-19  Score=117.64  Aligned_cols=117  Identities=22%  Similarity=0.276  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......   ......|++.|++||.+.+..++.++||||+|++++++++|..||......  ...... 
T Consensus       140 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~-  213 (285)
T cd05605         140 HIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEV-  213 (285)
T ss_pred             CEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHH-
Confidence            47899999998764322   122346889999999998878999999999999999999999998531110  000000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ...+    .....  ..+......+.+++.+||+.||++||     ++++++++
T Consensus       214 -------~~~~----~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         214 -------ERRV----KEDQE--EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             -------HHHh----hhccc--ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence                   0000    00000  01122345678899999999999999     88899876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.76  E-value=3.4e-19  Score=120.67  Aligned_cols=114  Identities=20%  Similarity=0.217  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     .... 
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~-  205 (318)
T cd05570         134 HIKIADFGMCKEGILGG--VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELF-  205 (318)
T ss_pred             cEEecccCCCeecCcCC--CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHH-
Confidence            57999999987532221  112334689999999999888899999999999999999999999853211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                             ........       ..+......+.+++.+||+.||++||++     .+++.+
T Consensus       206 -------~~i~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         206 -------QSILEDEV-------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             -------HHHHcCCC-------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence                   00000000       0011233467889999999999999999     888765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.76  E-value=9.2e-19  Score=117.19  Aligned_cols=117  Identities=20%  Similarity=0.241  Sum_probs=76.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++......  ........+++.|++||.+.     ...++.++|+|||||++|++++|..|+.....    .
T Consensus       148 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~  221 (292)
T cd06644         148 DIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----M  221 (292)
T ss_pred             CEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH----H
Confidence            4799999998764322  11223345788999999874     33477889999999999999999998743111    0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ... .        .....    ..+....+......+.+++.+||+.+|++||++.+++++
T Consensus       222 ~~~-~--------~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         222 RVL-L--------KIAKS----EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHH-H--------HHhcC----CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            000 0        00000    000001112233467889999999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.76  E-value=7.6e-19  Score=116.86  Aligned_cols=117  Identities=20%  Similarity=0.239  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|+..|+|||.+.+..++.++||||+||+++++++|..|+........ ..... 
T Consensus       133 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~-  207 (277)
T cd05607         133 NCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELK-  207 (277)
T ss_pred             CEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHH-
Confidence            47999999998764322   12234688899999999888899999999999999999999999753211110 00000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                             ...........      ......++.+++.+||+.+|.+||++.|+++
T Consensus       208 -------~~~~~~~~~~~------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         208 -------RRTLEDEVKFE------HQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             -------HHhhccccccc------cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence                   01111111000      0122345788999999999999999966553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.76  E-value=8.1e-19  Score=116.92  Aligned_cols=134  Identities=16%  Similarity=0.135  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......++..|+|||.+.+. .++.++||||+||+++++++|..|+.........+....
T Consensus       137 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~  214 (284)
T cd07839         137 ELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  214 (284)
T ss_pred             cEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHH
Confidence            479999999987643321  12234568899999987664 478899999999999999999888543222111111111


Q ss_pred             hhhc---cchh---hhhcccc-chhhhhcc---hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRL---TEVVDTN-LVREEQNF---SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~---~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ....   ....... ........   .........+.+++.+||+.+|.+|||++|++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         215 RLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             HHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            1000   0000   0000000 00000000   0011234567889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9.4e-19  Score=115.89  Aligned_cols=117  Identities=21%  Similarity=0.249  Sum_probs=77.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++.......  .......++..|+|||.+..     ..++.++||||||++++++++|..||......    
T Consensus       151 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----  224 (275)
T cd06608         151 EVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----  224 (275)
T ss_pred             eEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH----
Confidence            47899999988654321  12233467889999997643     24678899999999999999999997532110    


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...         ......    .......+......+.+++.+||..||++|||+.||+++
T Consensus       225 ~~~---------~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         225 RAL---------FKIPRN----PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             HHH---------HHhhcc----CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            000         000000    000111122344568899999999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.76  E-value=1.3e-18  Score=116.60  Aligned_cols=117  Identities=15%  Similarity=0.177  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......+++.|++||.+....++.++|+||||++++++++|..||..........     
T Consensus       153 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-----  225 (293)
T cd06647         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----  225 (293)
T ss_pred             CEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-----
Confidence            479999999876543221  2233467888999999887788999999999999999999999985321110000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ...    ....+....+......+.+++.+||..+|.+||++.+++.+
T Consensus       226 --------~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         226 --------LIA----TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             --------ehh----cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    000    00001111122334567889999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=3.6e-19  Score=121.07  Aligned_cols=111  Identities=19%  Similarity=0.155  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......     ....|++.|+|||.+.+..++.++|||||||+++++++|..||.....    . ..  
T Consensus       156 ~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~-~~--  223 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----F-RI--  223 (329)
T ss_pred             CEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----H-HH--
Confidence            57999999998764321     224689999999999888889999999999999999999999843110    0 00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||+.||.+|++     +++++.+
T Consensus       224 ------~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        224 ------YEKILAGRL-------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             ------HHHHhcCCc-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence                  011111100       001112235678999999999999997     6888866

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.76  E-value=3.9e-19  Score=132.68  Aligned_cols=114  Identities=19%  Similarity=0.237  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++..+....   ......|++.|+|||++.+  ..++.++|||||||+++++++|..||.....    ....
T Consensus       180 iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~----~~ql  252 (1021)
T PTZ00266        180 IAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN----FSQL  252 (1021)
T ss_pred             ceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc----HHHH
Confidence            37999999998764322   1233468999999998854  3588999999999999999999999853211    1111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...        +....      ..+. ......+.+|+..||+.+|.+||++.|++.+
T Consensus       253 i~~--------lk~~p------~lpi-~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        253 ISE--------LKRGP------DLPI-KGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             HHH--------HhcCC------CCCc-CCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            110        00000      0000 1123467889999999999999999999954

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.3e-19  Score=119.34  Aligned_cols=111  Identities=18%  Similarity=0.169  Sum_probs=78.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     .....|++.|+|||.+.+..++.++|||||||+++++++|..||.....     ...  
T Consensus       139 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~--  206 (291)
T cd05612         139 HIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGI--  206 (291)
T ss_pred             CEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            4799999999876422     1224689999999999888889999999999999999999999753111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||+.||.+||+     +.+++++
T Consensus       207 ------~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         207 ------YEKILAGKL-------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             ------HHHHHhCCc-------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence                  001111100       001112345788999999999999995     8998877

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.76  E-value=9.6e-19  Score=115.78  Aligned_cols=121  Identities=26%  Similarity=0.443  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCCCCcccc-cc--cccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQT-MT--MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~-~~--~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++............. ..  ..+..|++||.+.+..++.++||||||++++++++ |..|+......  ...
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~  221 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVI  221 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHH
Confidence            57899999988654322111111 11  12457999999988888999999999999999886 88887431110  000


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ....           .. .     ..+.+.+.+..+.+++.+||+.+|.+||++.+|+..|+++
T Consensus       222 ~~i~-----------~~-~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         222 NAIE-----------QD-Y-----RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHH-----------cC-C-----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            0000           00 0     0011123345678899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.76  E-value=6.8e-19  Score=115.65  Aligned_cols=118  Identities=27%  Similarity=0.320  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|++||.+.+..++.++||||||++++++++ |..|+.....     ....
T Consensus       138 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~  211 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVV  211 (256)
T ss_pred             eEEECCCcceeecccCc-ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHH
Confidence            47899999998654322 111122234668999999887788999999999999999998 8888743111     0011


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...     ...    ....     .+......+.+++.+||+.+|++|||+.|+++.|.
T Consensus       212 ~~~-----~~~----~~~~-----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         212 ETI-----NAG----FRLY-----KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHH-----hCC----CCCC-----CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            000     000    0000     00112346888999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.76  E-value=1.1e-18  Score=115.44  Aligned_cols=117  Identities=21%  Similarity=0.181  Sum_probs=74.8

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......++..|+|||.+.+..++.++||||+||+++++++|..||.....    .... 
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~-  218 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAI-  218 (266)
T ss_pred             CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHH-
Confidence            5799999999865321111 111234578889999999888889999999999999999999999753211    0000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ......   ...+..  +......+..++ +||..+|++||+++||+.+
T Consensus       219 --------~~~~~~---~~~~~~--~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         219 --------FKIATQ---PTNPQL--PSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             --------HHHhcC---CCCCCC--chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence                    000000   000000  112223344555 6888999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=2.9e-19  Score=125.22  Aligned_cols=113  Identities=20%  Similarity=0.307  Sum_probs=84.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|+|+|......    +-.+.+|||-|||||+.- ..|+..+||||||+.++||+++..|+..+....-......+
T Consensus       184 ~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S  258 (632)
T KOG0584|consen  184 EVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS  258 (632)
T ss_pred             ceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc
Confidence            4899999999987533    233478999999999987 48999999999999999999999998765443333333333


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +-.+..+.++-                 -+++.+|+.+||.. .++|+|+.|+|+.
T Consensus       259 GiKP~sl~kV~-----------------dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  259 GIKPAALSKVK-----------------DPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             CCCHHHhhccC-----------------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            22233222222                 13577899999999 9999999999975

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=6.7e-19  Score=124.51  Aligned_cols=108  Identities=21%  Similarity=0.220  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++..-..  -...+..+|||-|+|||++.++.|+..+|=|+||+++|||+.|+.||....+          
T Consensus       506 h~kiADFGlcKe~m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE----------  573 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE----------  573 (694)
T ss_pred             cEEecccccccccCCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH----------
Confidence            4799999999964311  1256678999999999999999999999999999999999999999853111          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM  131 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  131 (153)
                             .++.+. +.....  ..|.-...+.+.+|.+++..+|++|.-+
T Consensus       574 -------ee~Fds-I~~d~~--~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  574 -------EEVFDS-IVNDEV--RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -------HHHHHH-HhcCCC--CCCCcccHHHHHHHHHHhccCcccccCC
Confidence                   111111 111111  1223455678889999999999999876

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=1.6e-18  Score=123.70  Aligned_cols=135  Identities=15%  Similarity=0.150  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCC-CCccCCCc-cchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP-TNEMFTGK-TNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p-~~~~~~~~-~~~~~~   79 (153)
                      .+||+|||+++.+.... ........|++.|++||++.+..++.++|||||||+++++++|..+ +....... ..+...
T Consensus       305 ~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~  383 (501)
T PHA03210        305 KIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI  383 (501)
T ss_pred             CEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence            47999999998765332 1122335789999999999888899999999999999999998753 32211110 011111


Q ss_pred             hh------hhccch---hhhhccc-cchhhhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VS------ESLPDR---LTEVVDT-NLVREEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~------~~~~~~---~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..      ...+..   +...+.. .+.......+   ........+.+++.+||+.||++|||+.|++.+
T Consensus       384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            10      000000   0000000 0000000000   001122456778899999999999999999975

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.75  E-value=6.9e-19  Score=127.14  Aligned_cols=124  Identities=21%  Similarity=0.395  Sum_probs=94.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+..+....+.....-.+.|+|-|.+....|+.++||||||+++||+++ |..|++....         
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~---------  906 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA---------  906 (1177)
T ss_pred             eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH---------
Confidence            479999999998876554444444445678999999999999999999999999999997 8888643111         


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                           ..+.     ++.+...+.+.|+.+..+++-+|.+||..|+..||+++++...+.++.+.
T Consensus       907 -----~eI~-----dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  907 -----EEIP-----DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             -----HHhh-----HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence                 1111     12222333556677888899999999999999999999999988877654

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.75  E-value=4.7e-19  Score=120.53  Aligned_cols=120  Identities=16%  Similarity=0.252  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCcc---chHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT---NLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~---~~~~   78 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++|||||||+++++++|..||........   ....
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05618         134 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  211 (329)
T ss_pred             CEEEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence            57999999997542211  122345789999999999888899999999999999999999999853211110   0111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC------HHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC------MTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~evl~~  137 (153)
                      +...       .+.....       ..+......+.+++.+||+.||++||+      +.+++++
T Consensus       212 ~~~~-------~i~~~~~-------~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         212 YLFQ-------VILEKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHH-------HHhcCCC-------CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            1100       0000000       011223346778999999999999998      4677655

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.75  E-value=3.2e-19  Score=118.15  Aligned_cols=114  Identities=21%  Similarity=0.145  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|||+|+..-...  ......+||+.|+|||++....|+..+|-||+|+++++|++|.+||.....          
T Consensus       163 Hi~LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~----------  230 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV----------  230 (357)
T ss_pred             cEEEeccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH----------
Confidence            58999999999643321  234457999999999999999999999999999999999999999853111          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC----CHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI----CMTDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~evl~  136 (153)
                         ......++..+....      +.-...+..+++.+.+..+|++|.    .+.++..
T Consensus       231 ---~~~~~~I~~~k~~~~------p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  231 ---KKMYDKILKGKLPLP------PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR  280 (357)
T ss_pred             ---HHHHHHHhcCcCCCC------CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence               111122222221111      111334577888999999999995    4555433

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.75  E-value=8.2e-19  Score=117.67  Aligned_cols=118  Identities=22%  Similarity=0.238  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC----ccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI----VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++..+....   ......++..|++||.+....    ++.++||||||++++++++|..|+.........+ 
T Consensus       153 ~~kL~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-  228 (296)
T cd06618         153 NVKLCDFGISGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL-  228 (296)
T ss_pred             CEEECccccchhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH-
Confidence            57999999987654322   112234677899999886543    7889999999999999999999975311110000 


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                                 ..........    .+........+.+++.+||+.+|.+||++.+++++-
T Consensus       229 -----------~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         229 -----------TKILQEEPPS----LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             -----------HHHhcCCCCC----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence                       0111110000    000011234678899999999999999999998874

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.75  E-value=9e-19  Score=115.75  Aligned_cols=120  Identities=17%  Similarity=0.242  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.+....  .......++..|++||.+.   ...++.++|+||||++++++++|..|+.........   
T Consensus       144 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~---  218 (267)
T cd06646         144 DVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL---  218 (267)
T ss_pred             CEEECcCccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh---
Confidence            47999999998764221  1122346788999999874   334778999999999999999999887432111000   


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                                ..........  +...........+.+++.+||+.+|++|||+++++++|
T Consensus       219 ----------~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         219 ----------FLMSKSNFQP--PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             ----------eeeecCCCCC--CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence                      0000000000  00000112335678999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2.6e-19  Score=122.57  Aligned_cols=119  Identities=20%  Similarity=0.304  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCC---------------------------CCcccccccccccccCcCccCCCCccccccchhhhH
Q 043099            2 VAHVSDFGISKLLGEGD---------------------------GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGV   54 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~---------------------------~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~   54 (153)
                      .+||+|||+++......                           .........|++.|+|||.+.+..++.++|||||||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            47999999998764322                           001223356899999999998888999999999999


Q ss_pred             HHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-HHH
Q 043099           55 LLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-MTD  133 (153)
Q Consensus        55 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~e  133 (153)
                      +++++++|..||.....    .. .        ...+....   .....+........+.+++.+|+. +|.+||+ +.|
T Consensus       219 il~ell~g~~Pf~~~~~----~~-~--------~~~i~~~~---~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~  281 (350)
T cd05573         219 ILYEMLYGFPPFYSDTL----QE-T--------YNKIINWK---ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEE  281 (350)
T ss_pred             hhhhhccCCCCCCCCCH----HH-H--------HHHHhccC---CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHH
Confidence            99999999999853211    00 0        00111000   000000011134567788899997 9999999 999


Q ss_pred             HHHH
Q 043099          134 AAAK  137 (153)
Q Consensus       134 vl~~  137 (153)
                      ++++
T Consensus       282 ll~h  285 (350)
T cd05573         282 IKSH  285 (350)
T ss_pred             HhcC
Confidence            9986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.75  E-value=9e-19  Score=115.58  Aligned_cols=122  Identities=20%  Similarity=0.245  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCc--ccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSM--TQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++..+.......  ......|+..|++||.+... .++.++|+||||++++++++|..|+...... .....
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~  218 (267)
T cd06610         140 SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLML  218 (267)
T ss_pred             CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHH
Confidence            47899999998765432221  22334678899999988766 6889999999999999999999997532111 01111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....         .......    .........+.+++.+||..+|++||++.||+++
T Consensus       219 ~~~~~---------~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         219 TLQND---------PPSLETG----ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HhcCC---------CCCcCCc----cccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            11000         0000000    0001234567899999999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.75  E-value=7e-19  Score=119.09  Aligned_cols=113  Identities=21%  Similarity=0.254  Sum_probs=76.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     .....
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~  206 (316)
T cd05619         134 HIKIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-----EELFQ  206 (316)
T ss_pred             CEEEccCCcceECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence            47999999987542211  122334689999999999888899999999999999999999999853211     00000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT-DAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  136 (153)
                              .+....     ...  +......+.+++.+||+.+|++||++. ++++
T Consensus       207 --------~i~~~~-----~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         207 --------SIRMDN-----PCY--PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             --------HHHhCC-----CCC--CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence                    000000     000  111234567899999999999999997 6655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.75  E-value=5.1e-19  Score=120.07  Aligned_cols=114  Identities=19%  Similarity=0.240  Sum_probs=77.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++|||||||+++++++|..||.....  ....    
T Consensus       139 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~----  210 (323)
T cd05616         139 HIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELF----  210 (323)
T ss_pred             cEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHH----
Confidence            57999999998643211  122345689999999999888899999999999999999999999853111  0000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                             ..+.....       ..+......+.+++.+|++.+|.+|++.     .+++++
T Consensus       211 -------~~i~~~~~-------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         211 -------QSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             -------HHHHhCCC-------CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence                   11111000       0111233467889999999999999984     566543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.75  E-value=9.9e-19  Score=115.43  Aligned_cols=109  Identities=19%  Similarity=0.249  Sum_probs=73.8

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccC-CCCccccccchhhhHHHHHHH-hcCCCCCccCCCccchHHhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-NGIVSIKCDVYSYGVLLMEAF-TKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~   80 (153)
                      +|++|||++.....      .....++..|+|||.+. +..++.++||||||+++++++ .|..|+......  ..... 
T Consensus       151 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~-  221 (262)
T cd05077         151 IKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--EKERF-  221 (262)
T ss_pred             eEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--HHHHH-
Confidence            78999999876532      12235778899999886 456889999999999999997 577775421100  00000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                                 .......       .......+.+++.+||+.+|.+||++.++++.|
T Consensus       222 -----------~~~~~~~-------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         222 -----------YEGQCML-------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             -----------HhcCccC-------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence                       0000000       011234578899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.75  E-value=6.7e-19  Score=119.17  Aligned_cols=113  Identities=19%  Similarity=0.206  Sum_probs=76.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....  ........
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~  209 (316)
T cd05620         134 HIKIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIR  209 (316)
T ss_pred             CEEeCccCCCeecccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence            57999999987532111  123345689999999999888899999999999999999999999853211  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT-DAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  136 (153)
                                 ..     ....  +.....++.+++.+||+.||++||++. ++++
T Consensus       210 -----------~~-----~~~~--~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~  247 (316)
T cd05620         210 -----------VD-----TPHY--PRWITKESKDILEKLFERDPTRRLGVVGNIRG  247 (316)
T ss_pred             -----------hC-----CCCC--CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence                       00     0000  111234577899999999999999984 6653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.75  E-value=1.6e-18  Score=116.91  Aligned_cols=132  Identities=12%  Similarity=0.098  Sum_probs=80.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......+++.|+|||.+.+ ..++.++||||+||+++++++|..||....... ......
T Consensus       142 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~  218 (309)
T cd07872         142 ELKLADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIF  218 (309)
T ss_pred             CEEECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            479999999986543221  1223457889999998765 368899999999999999999999985422111 111111


Q ss_pred             h---hhccchhhhhc---------cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVV---------DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+....         ....... ...........++.+++.+||+.||.+|||+.|++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         219 RLLGTPTEETWPGISSNDEFKNYNFPKYKPQ-PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             HHhCCCCHHHHhhhcchhhhhhhhcCccCCC-chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            1   00000010000         0000000 0000011234567899999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.75  E-value=1.5e-18  Score=115.40  Aligned_cols=115  Identities=16%  Similarity=0.252  Sum_probs=79.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++..+....  .......++..|++||.+.+..++.++|+||||++++++++|..|+.......  ......
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~  214 (277)
T cd06642         139 DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIP  214 (277)
T ss_pred             CEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhh
Confidence            47899999998764321  12223457888999999988888999999999999999999999874321110  000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...        ...         ........+.+++.+||+.+|++||++.+|+++
T Consensus       215 ~~~--------~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         215 KNS--------PPT---------LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             cCC--------CCC---------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            000        000         011234567889999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.9e-18  Score=113.80  Aligned_cols=119  Identities=18%  Similarity=0.262  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC---CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG---IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++.......  .......++..|++||.+.+.   .++.++|+||||++++++++|..|+........    
T Consensus       139 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~----  212 (262)
T cd06613         139 DVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA----  212 (262)
T ss_pred             CEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH----
Confidence            47899999987654321  112234678889999998766   788899999999999999999999753211100    


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...         ........  ............+.+++.+||..+|.+|||+.+|+.+
T Consensus       213 ~~~---------~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         213 LFL---------ISKSNFPP--PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHH---------HHhccCCC--ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000         00000000  0001112344568899999999999999999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.75  E-value=1.8e-19  Score=122.60  Aligned_cols=118  Identities=18%  Similarity=0.297  Sum_probs=77.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC------CCCccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS------NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      .+||+|||++..+..... .......|++.|+|||++.      ...++.++|||||||+++++++|..||......   
T Consensus       140 ~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---  215 (330)
T cd05601         140 HIKLADFGSAARLTANKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA---  215 (330)
T ss_pred             CEEeccCCCCeECCCCCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH---
Confidence            579999999987653321 1223346899999999876      345778999999999999999999998532110   


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                       . .        ...+.....   ...++........+.+++.+|+. +|.+||++.+++++
T Consensus       216 -~-~--------~~~i~~~~~---~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         216 -K-T--------YNNIMNFQR---FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             -H-H--------HHHHHcCCC---ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence             0 0        001100000   00011111233457788888997 99999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.75  E-value=1.8e-18  Score=113.61  Aligned_cols=115  Identities=23%  Similarity=0.273  Sum_probs=79.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......  .......+++.|+|||...+..++.++|+||+|++++++++|..|+....     ......
T Consensus       140 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~  212 (257)
T cd08223         140 IIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVY  212 (257)
T ss_pred             cEEEecccceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHH
Confidence            47899999998764322  12233457889999999988888999999999999999999998874211     000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ........      ..+......+.+++.+||+.+|.+||++.+++++
T Consensus       213 --------~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         213 --------RIIEGKLP------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             --------HHHhcCCC------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                    00000000      0112334568899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.75  E-value=1.6e-18  Score=113.81  Aligned_cols=114  Identities=21%  Similarity=0.288  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......++..|++||.+.+..++.++||||||++++++++|..|+......     ... 
T Consensus       140 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~-  210 (256)
T cd08220         140 VVKIGDFGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALV-  210 (256)
T ss_pred             EEEEccCCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHH-
Confidence            47899999998765332   112245788999999998878889999999999999999999887432110     000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             .........      +.+......+.+++.+||+.+|.+|||+.|++++
T Consensus       211 -------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         211 -------LKIMSGTFA------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             -------HHHHhcCCC------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                   000000000      0111234567889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.75  E-value=1.3e-18  Score=115.93  Aligned_cols=133  Identities=23%  Similarity=0.169  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......  .......+++.|+|||.+.+. .++.++||||||++++++++|..|+....... ......
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~  215 (285)
T cd07861         139 VIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIF  215 (285)
T ss_pred             cEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH
Confidence            47999999998654322  122334568889999987654 57889999999999999999998875321110 000000


Q ss_pred             hhhc---cchh---hhhcc--ccchhhh-hc-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRL---TEVVD--TNLVREE-QN-FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~---~~~~~--~~~~~~~-~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+   ....+  ....... .. .........++.+++.+||+.||.+|||+.+|+.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         216 RILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            0000   0000   00000  0000000 00 00001234567789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.75  E-value=8.6e-19  Score=117.69  Aligned_cols=117  Identities=15%  Similarity=0.186  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......|+..|+|||.+.+..++.++||||||++++++++|..||.....  ........
T Consensus       155 ~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~  230 (297)
T cd06659         155 RVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLR  230 (297)
T ss_pred             cEEEeechhHhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh
Confidence            47999999987654321  122335688899999999887889999999999999999999999753111  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...        ...       ..........+.+++.+||+.+|++||++.+++++
T Consensus       231 ~~~--------~~~-------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         231 DSP--------PPK-------LKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             ccC--------CCC-------ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            000        000       00011123457789999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.75  E-value=7.9e-19  Score=119.44  Aligned_cols=120  Identities=16%  Similarity=0.236  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc---cchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK---TNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~---~~~~~   78 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++|+||+||+++++++|..||.......   .....
T Consensus       134 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05588         134 HIKLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED  211 (329)
T ss_pred             CEEECcCccccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence            47999999987532211  12234578999999999988889999999999999999999999985322111   00001


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC------HHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC------MTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~evl~~  137 (153)
                      +..       ..+.....       ..+......+.+++.+||+.+|.+|++      +.+++++
T Consensus       212 ~~~-------~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         212 YLF-------QVILEKQI-------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHH-------HHHHcCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            100       00111100       011123346788999999999999997      6777755

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.75  E-value=1.8e-18  Score=114.36  Aligned_cols=121  Identities=26%  Similarity=0.436  Sum_probs=81.1

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      ++||+|||+++.+...... .......++..|++||.+.+..++.++|+||||++++++++ |..|+......  .....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~  221 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKA  221 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHH
Confidence            4789999999876432211 11112223567999999988789999999999999999886 88887432110  01111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..           .. ..     .+.+...+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus       222 ~~-----------~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         222 IE-----------EG-YR-----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             Hh-----------CC-Cc-----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            10           00 00     001112345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.74  E-value=1.1e-18  Score=116.87  Aligned_cols=117  Identities=16%  Similarity=0.182  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||++.......  .......|+..|+|||...+..++.++||||||++++++++|..|+.....    .... .
T Consensus       156 ~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~~~~-~  228 (292)
T cd06658         156 RIKLSDFGFCAQVSKEV--PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----LQAM-R  228 (292)
T ss_pred             CEEEccCcchhhccccc--ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHH-H
Confidence            57999999987653221  112234678899999998887889999999999999999999999743111    0000 0


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .     ..........       ........+.+++.+||..+|.+|||+.|++++
T Consensus       229 ~-----~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         229 R-----IRDNLPPRVK-------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             H-----HHhcCCCccc-------cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            0     0000000000       011223457788999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.74  E-value=1e-18  Score=120.56  Aligned_cols=119  Identities=16%  Similarity=0.224  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC----CccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG----IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++....... ........|++.|+|||++.+.    .++.++|||||||+++++++|..||.....     .
T Consensus       180 ~~kL~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~  253 (370)
T cd05596         180 HLKLADFGTCMKMDANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----V  253 (370)
T ss_pred             CEEEEeccceeeccCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----H
Confidence            58999999998764322 1122345789999999987653    378899999999999999999999853211     0


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQ--RICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  137 (153)
                      ..        ...+.....   ...++........+.+++.+||..+|.+  |+++.|++++
T Consensus       254 ~~--------~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         254 GT--------YSKIMDHKN---SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HH--------HHHHHcCCC---cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            00        011111000   0001111123456778999999988987  9999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.74  E-value=4.7e-18  Score=114.63  Aligned_cols=132  Identities=17%  Similarity=0.218  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......    ......++..|++||.+.+..++.++|+||||++++++++|..|+.....  ........
T Consensus       138 ~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~  211 (308)
T cd06615         138 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFG  211 (308)
T ss_pred             cEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhc
Confidence            4799999998765322    12334678899999998877788999999999999999999999743211  11111111


Q ss_pred             hhccchh---------------------hhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           82 ESLPDRL---------------------TEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        82 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      .......                     ....+.......+..+. ......+.+++.+||..+|++|||+.||+++-.-
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~  290 (308)
T cd06615         212 RPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS-GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI  290 (308)
T ss_pred             CccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcC-cccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            0000000                     00000000000000100 1133468899999999999999999999998544

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=1.8e-18  Score=114.26  Aligned_cols=117  Identities=20%  Similarity=0.220  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCC----CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDG----SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~----~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++.......    ........|+..|++||.+.+..++.++|+||+|++++++++|..||.....    ..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~  219 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQ  219 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HH
Confidence            479999999987653211    1111234578889999999887888999999999999999999999853211    00


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...         ..... ..   +  ..+......+.+++.+||+.+|.+||++.|++++
T Consensus       220 ~~~---------~~~~~-~~---~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         220 AIF---------KIGEN-AS---P--EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHH---------HHhcc-CC---C--cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            000         00000 00   0  0112234567889999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.74  E-value=1.4e-18  Score=114.61  Aligned_cols=137  Identities=19%  Similarity=0.183  Sum_probs=86.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+.-+...  -+..++|.+|.|||++.+. .|+...|+||+||++.||++++..|....+ ...+...+
T Consensus       158 ~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If  234 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIF  234 (323)
T ss_pred             cEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHH
Confidence            4799999999987644332  3445789999999998876 699999999999999999998877643222 11111111


Q ss_pred             h---hhccchhhhhc---cccc--hhhh--hcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHH
Q 043099           81 S---ESLPDRLTEVV---DTNL--VREE--QNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKI  141 (153)
Q Consensus        81 ~---~~~~~~~~~~~---~~~~--~~~~--~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~  141 (153)
                      .   -.....+..+.   +.+.  ....  .... .-........+++.+|++++|.+|.|++.++.+  +..+
T Consensus       235 ~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  235 RLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             HHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            1   11111122211   1110  0000  0000 001111467889999999999999999999987  5544

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.74  E-value=2.3e-18  Score=112.00  Aligned_cols=119  Identities=17%  Similarity=0.162  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.-.++   ......+-|++|.|||++...+|+..+|+||+|+++|-++.|.+||-.... ....     
T Consensus       202 ~lKLtDfGFAK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-~ais-----  272 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-LAIS-----  272 (400)
T ss_pred             ceEecccccccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-ccCC-----
Confidence            5799999999875432   223345679999999999888999999999999999999999999743211 1110     


Q ss_pred             hhccchhhhhccccchhhhhcch--hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFS--AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          .+..    .++......|+  .+........+++++.|..+|++|.|+.|++.+
T Consensus       273 ----pgMk----~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  273 ----PGMK----RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             ----hhHH----hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence                0011    11111112222  335667778889999999999999999999876

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.74  E-value=1.9e-19  Score=122.25  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||.....     .... 
T Consensus       134 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~-  205 (325)
T cd05594         134 HIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLF-  205 (325)
T ss_pred             CEEEecCCCCeecCCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHH-
Confidence            58999999987643221  112234689999999999888899999999999999999999999853111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+.....       ..+.....++.+++.+||+.||++|+     ++.+++++
T Consensus       206 -------~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         206 -------ELILMEEI-------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             -------HHHhcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence                   00000000       00112234677899999999999997     89999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.74  E-value=1.2e-18  Score=116.30  Aligned_cols=117  Identities=15%  Similarity=0.178  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+.......  .......|++.|++||.+.+..++.++||||||++++++++|..|+.....  ........
T Consensus       153 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~~~~~~~~  228 (285)
T cd06648         153 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIR  228 (285)
T ss_pred             cEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHH
Confidence            47899999887654321  112234678899999998887889999999999999999999999743110  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ......       ...+......+.+++.+||+.+|++||++.+++++
T Consensus       229 --------~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         229 --------DNLPPK-------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             --------hcCCCC-------CcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence                    000000       00111233568899999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.74  E-value=6.4e-18  Score=112.63  Aligned_cols=131  Identities=17%  Similarity=0.123  Sum_probs=80.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+.......   ......++..|++||.+.+..++.++|+||||++++++++|..|+..... .........
T Consensus       145 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~  220 (287)
T cd07838         145 QVKIADFGLARIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFD  220 (287)
T ss_pred             CEEEeccCcceeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHH
Confidence            57999999998764332   12223467889999999888889999999999999999999888753221 111111111


Q ss_pred             hhccchhhhhc---------cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVV---------DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...........         ......... ..........+.+++.+||+.+|++||++.|++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             HcCCCChHhcCCCcccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence            10000000000         000000000 00112345677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.74  E-value=2.5e-18  Score=113.43  Aligned_cols=119  Identities=20%  Similarity=0.244  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+.......    .....++..|++||.+.+..++.++|+||||++++++++|..|+...............
T Consensus       139 ~~~l~d~g~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (265)
T cd06605         139 QIKLCDFGVSGQLVNSL----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ  214 (265)
T ss_pred             CEEEeecccchhhHHHH----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence            47899999987653221    11156788899999998888999999999999999999999997543221111111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .......    ...+ .......+.+++.+||..+|++|||+.|++.+
T Consensus       215 --------~~~~~~~----~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         215 --------YIVNEPP----PRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             --------HHhcCCC----CCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence                    1111000    0000 01134567889999999999999999999865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.74  E-value=2e-18  Score=115.22  Aligned_cols=117  Identities=22%  Similarity=0.296  Sum_probs=78.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|+..|++||.+.+..++.++|+||+|++++++++|..||......  .......
T Consensus       140 ~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--~~~~~~~  214 (285)
T cd05632         140 HIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--VKREEVD  214 (285)
T ss_pred             CEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH
Confidence            57999999997654321   122346899999999998888999999999999999999999998532110  0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                      .       .....     ...  .+......+.+++.+||+.+|++||+     +.+++++
T Consensus       215 ~-------~~~~~-----~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         215 R-------RVLET-----EEV--YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             H-------hhhcc-----ccc--cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            0       00000     000  01122345678999999999999999     7788876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.74  E-value=1.6e-18  Score=114.03  Aligned_cols=121  Identities=24%  Similarity=0.270  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||.+......  ........++..|.|||.+. +..++.++||||+|++++++++|..|+..... ..... ..
T Consensus       136 ~~~l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~-~~~~~-~~  211 (260)
T PF00069_consen  136 EVKLIDFGSSVKLSEN--NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS-DDQLE-II  211 (260)
T ss_dssp             EEEESSGTTTEESTST--TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH-HHHHH-HH
T ss_pred             cccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc-hhhhh-hh
Confidence            4689999999865211  22344557888999999988 67899999999999999999999998754200 00000 00


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ...........   ..........+.+++.+||+.+|++||++.+++++
T Consensus       212 --------~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  212 --------EKILKRPLPSS---SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             --------HHHHHTHHHHH---TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             --------hhccccccccc---ccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    00000000000   00001112678899999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.74  E-value=4.6e-18  Score=113.11  Aligned_cols=131  Identities=15%  Similarity=0.119  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......++..|++||.+.. ..++.++||||+||+++++++|..||......  ......
T Consensus       137 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~  211 (282)
T cd07831         137 ILKLADFGSCRGIYSKP---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKI  211 (282)
T ss_pred             CeEEEecccccccccCC---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHH
Confidence            57999999998764322   1122457889999997644 45788999999999999999999887532211  000110


Q ss_pred             hhhc---cchhhhhcc-ccchh--hhhc-----chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEVVD-TNLVR--EEQN-----FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~~~-~~~~~--~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+..... .....  ....     ..........+.+++.+||+.+|.+||++.+++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         212 HDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             HHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            0000   000000000 00000  0000     00012335778999999999999999999999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.74  E-value=2.1e-18  Score=121.34  Aligned_cols=61  Identities=26%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .+||+|||.|.......    . ..+-+..|+|||++.+.+|+.+.|+||||||+.||.+|.+.|.
T Consensus       329 ~vKVIDFGSSc~~~q~v----y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp  389 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQRV----Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP  389 (586)
T ss_pred             ceeEEecccccccCCcc----e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence            57999999998864332    1 4567889999999999999999999999999999999976553

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=2.1e-18  Score=113.32  Aligned_cols=116  Identities=28%  Similarity=0.427  Sum_probs=79.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.++......     .....+..|.+||.+....++.++||||||++++++++ |..|+....     .....
T Consensus       140 ~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~  209 (256)
T cd05039         140 VAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVV  209 (256)
T ss_pred             CEEEccccccccccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHH
Confidence            47999999998763221     12234567999999887788899999999999999997 888874311     00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                               ..+......     ..+...+..+.+++.+||..+|++|||+.+|++.|+++
T Consensus       210 ---------~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         210 ---------PHVEKGYRM-----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             ---------HHHhcCCCC-----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                     000000000     00112345678899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.74  E-value=3.5e-18  Score=117.34  Aligned_cols=117  Identities=18%  Similarity=0.135  Sum_probs=87.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+|++|||++.....   .......+||+.|+|||++....|+..+|+||.|++++.|+.|..||.........      
T Consensus       177 ~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~------  247 (382)
T KOG0032|consen  177 RIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF------  247 (382)
T ss_pred             cEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH------
Confidence            579999999998765   22455678999999999999889999999999999999999999998532211111      


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+......-   ..+..+.....+.+++..++..||..|+|+.+++++
T Consensus       248 -------~~i~~~~~~f---~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  248 -------LAILRGDFDF---TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             -------HHHHcCCCCC---CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                   1122211110   011224456678899999999999999999999996

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.74  E-value=7.1e-19  Score=119.37  Aligned_cols=109  Identities=20%  Similarity=0.164  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||.....     .... 
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~-  205 (323)
T cd05575         134 HVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMY-  205 (323)
T ss_pred             cEEEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHH-
Confidence            47999999987543221  122344689999999999888899999999999999999999999853111     1110 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT  132 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  132 (153)
                             ..+......       .+......+.+++.+||+.+|.+||++.
T Consensus       206 -------~~i~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         206 -------DNILNKPLR-------LKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             -------HHHHcCCCC-------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                   111111100       0112245678899999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.74  E-value=3.2e-18  Score=112.46  Aligned_cols=116  Identities=24%  Similarity=0.325  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......+++.|.+||.+.+..++.++|+||||++++++++|..|+.....     .... 
T Consensus       139 ~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~-  210 (256)
T cd08221         139 LIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLV-  210 (256)
T ss_pred             CEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHH-
Confidence            479999999987643321  22334678899999998887788999999999999999999988743111     0111 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                             ...........      +......+.+++.+||+.+|.+||++.++++++
T Consensus       211 -------~~~~~~~~~~~------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         211 -------VKIVQGNYTPV------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             -------HHHHcCCCCCC------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence                   01111111000      122345678899999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.74  E-value=1.4e-18  Score=115.99  Aligned_cols=117  Identities=22%  Similarity=0.284  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......   ......|+..|+|||.+.+..++.++||||+|++++++++|..||.......  ....  
T Consensus       140 ~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~--  212 (285)
T cd05630         140 HIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREE--  212 (285)
T ss_pred             CEEEeeccceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHH--
Confidence            47899999997654322   1123468999999999988889999999999999999999999985321110  0000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            ....... ....     .+......+.+++.+||+.+|.+|||     +.|++++
T Consensus       213 ------~~~~~~~-~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         213 ------VERLVKE-VQEE-----YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             ------HHhhhhh-hhhh-----cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence                  0000000 0000     01122345778999999999999999     8999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=2.8e-18  Score=117.60  Aligned_cols=132  Identities=13%  Similarity=0.066  Sum_probs=88.8

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc-cchHH-
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK-TNLRN-   78 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~-   78 (153)
                      +.+||+|||-|-...     .+-+..+-|..|++||++.+..|++.+||||++|+.||++||...|....... ....+ 
T Consensus       391 i~vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH  465 (590)
T KOG1290|consen  391 IRVKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH  465 (590)
T ss_pred             eeEEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence            368999999997752     23344567889999999999999999999999999999999998776544321 11111 


Q ss_pred             ------------------------hhh-hhccchhhhhccccchhh-hhcchhhHHHHHHHHHHHhhccccCCCCCCCHH
Q 043099           79 ------------------------WVS-ESLPDRLTEVVDTNLVRE-EQNFSAKLDCLLSIMYLALDCCMESPEQRICMT  132 (153)
Q Consensus        79 ------------------------~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  132 (153)
                                              ++. .+....+.+.-...+... ...+..+.+...++.+++.-||+.+|.+||||.
T Consensus       466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~  545 (590)
T KOG1290|consen  466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAA  545 (590)
T ss_pred             HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHH
Confidence                                    000 000000111111111111 112333467788999999999999999999999


Q ss_pred             HHHHH
Q 043099          133 DAAAK  137 (153)
Q Consensus       133 evl~~  137 (153)
                      +.+++
T Consensus       546 ~cl~h  550 (590)
T KOG1290|consen  546 QCLKH  550 (590)
T ss_pred             HHhcC
Confidence            99975

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.74  E-value=1.1e-18  Score=118.47  Aligned_cols=114  Identities=20%  Similarity=0.254  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+||+++++++|+.||.....     ...  
T Consensus       139 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~--  209 (324)
T cd05587         139 HIKIADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DEL--  209 (324)
T ss_pred             CEEEeecCcceecCCCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            47999999987532211  122345689999999999888899999999999999999999999853111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||..+|.+|+++     .+++++
T Consensus       210 ------~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         210 ------FQSIMEHNV-------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             ------HHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence                  001110000       0011223457789999999999999986     566554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.74  E-value=1e-17  Score=110.88  Aligned_cols=123  Identities=21%  Similarity=0.286  Sum_probs=72.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-------CCccccccchhhhHHHHHHHhc-CCCCCccCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-------GIVSIKCDVYSYGVLLMEAFTK-KKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~g-~~p~~~~~~~~   73 (153)
                      .+||+|||++................++..|++||++..       ..++.++||||||+++++++++ ..|+.....  
T Consensus       137 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--  214 (268)
T cd05086         137 TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--  214 (268)
T ss_pred             cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--
Confidence            479999999865322111111223457888999998743       2356789999999999999974 556532111  


Q ss_pred             cchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           74 TNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                         ................++.+.         ......+.+++..|| .+|++||++.||++.|.
T Consensus       215 ---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         215 ---REVLNHVIKDQQVKLFKPQLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             ---HHHHHHHHhhcccccCCCccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence               111111000101111111111         112235667888898 67999999999988773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.74  E-value=1.3e-18  Score=125.31  Aligned_cols=132  Identities=15%  Similarity=0.085  Sum_probs=75.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC----------------------CccccccchhhhHHHHHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG----------------------IVSIKCDVYSYGVLLMEA   59 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~----------------------~~~~~~dv~s~g~~~~~~   59 (153)
                      .+||+|||+|+.+.... ........+++.|+|||.+...                      .++.++||||+||+++++
T Consensus       294 ~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el  372 (566)
T PLN03225        294 SFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQM  372 (566)
T ss_pred             cEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHH
Confidence            58999999998764332 2223445789999999954321                      234567999999999999


Q ss_pred             HhcCCCCCccCCCccchHHhhhhhc--cchhhhhccccchhh-hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           60 FTKKKPTNEMFTGKTNLRNWVSESL--PDRLTEVVDTNLVRE-EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        60 ~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                      +++..+.....   ..+...+....  ...+........... ...+...+.......+|+.+||+.||.+|||+.|+++
T Consensus       373 ~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        373 AFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence            98765532110   00000011000  001111111110000 0001111112234568999999999999999999998


Q ss_pred             H
Q 043099          137 K  137 (153)
Q Consensus       137 ~  137 (153)
                      +
T Consensus       450 H  450 (566)
T PLN03225        450 H  450 (566)
T ss_pred             C
Confidence            6

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=1.1e-17  Score=111.71  Aligned_cols=124  Identities=21%  Similarity=0.170  Sum_probs=80.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......    .....++..|++||.+.+..++.++|+||+|++++++++|..|+...............
T Consensus       143 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (287)
T cd06621         143 QVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS  218 (287)
T ss_pred             eEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH
Confidence            47899999987653221    12335677899999988888999999999999999999999998643221111111100


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .......................+.+++.+||..+|.+|||+.|++++
T Consensus       219 --------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         219 --------YIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             --------HHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence                    000000000000000001234567899999999999999999999985

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.74  E-value=7.2e-19  Score=120.10  Aligned_cols=111  Identities=14%  Similarity=0.116  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++.....     .....|++.|+|||++.+..++.++||||+||+++++++|..||.....  ...     
T Consensus       169 ~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~-----  236 (340)
T PTZ00426        169 FIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--LLI-----  236 (340)
T ss_pred             CEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--HHH-----
Confidence            5799999999876422     2234689999999999888889999999999999999999999853111  000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ...+......       .+......+.+++.+||+.+|.+|+     ++++++++
T Consensus       237 ------~~~i~~~~~~-------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        237 ------YQKILEGIIY-------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             ------HHHHhcCCCC-------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence                  0111111100       0111234567899999999999995     89998876

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.74  E-value=3.8e-18  Score=123.21  Aligned_cols=121  Identities=18%  Similarity=0.186  Sum_probs=88.0

Q ss_pred             eEecccccceeccCCCCCc-----cc--ccccccccccCcCcc---CCCCccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            3 AHVSDFGISKLLGEGDGSM-----TQ--TMTMATIGYMAPEYG---SNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~-----~~--~~~~g~~~~~~pe~~---~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      -||||||.+..........     ..  -...-|+.|++||++   .+..++.|+|||++||++|.+.....||+.    
T Consensus       185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~----  260 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEE----  260 (738)
T ss_pred             EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCc----
Confidence            5899999987543221100     00  012458899999964   456799999999999999999999999864    


Q ss_pred             ccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           73 KTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                                   .+...++...+.     ++..+.....+.+|+..||+.+|.+||++-||+..+-++....
T Consensus       261 -------------sg~laIlng~Y~-----~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  261 -------------SGKLAILNGNYS-----FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             -------------CcceeEEecccc-----CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence                         112333333322     2222456778999999999999999999999999999988764

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.74  E-value=3.3e-18  Score=113.07  Aligned_cols=119  Identities=18%  Similarity=0.250  Sum_probs=76.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++......  ........|+..|+|||.+.   ...++.++|+||+||+++++++|..|+........ ...
T Consensus       144 ~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~  220 (267)
T cd06645         144 HVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFL  220 (267)
T ss_pred             CEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHh
Confidence            4789999998765422  11223446889999999864   34578899999999999999999998743221100 000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...    .   .......       .........+.+++.+||+.+|++||++.+|+++
T Consensus       221 ~~~----~---~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         221 MTK----S---NFQPPKL-------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             hhc----c---CCCCCcc-------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            000    0   0000000       0001123457789999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.74  E-value=4e-18  Score=112.77  Aligned_cols=117  Identities=25%  Similarity=0.337  Sum_probs=76.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++........  ......++..|++||.+...  .++.++|+||||++++++++|..|+..........  +
T Consensus       147 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~  222 (268)
T cd06624         147 VVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--F  222 (268)
T ss_pred             eEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--h
Confidence            478999999886543211  12223578899999987653  37889999999999999999999974311100000  0


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                       .         .   ......+  ..+......+.+++.+||+.+|.+|||+.|++.+
T Consensus       223 -~---------~---~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         223 -K---------V---GMFKIHP--EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -h---------h---hhhccCC--CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence             0         0   0000000  0112234567889999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.73  E-value=6.3e-19  Score=119.72  Aligned_cols=111  Identities=21%  Similarity=0.173  Sum_probs=76.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+||+++++++|..||.....     .... 
T Consensus       134 ~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~-  205 (325)
T cd05602         134 HIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMY-  205 (325)
T ss_pred             CEEEccCCCCcccccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHH-
Confidence            47999999997643221  123345689999999999888899999999999999999999999853111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDA  134 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  134 (153)
                             ........       ..+......+.+++.+||+.+|.+|+++.+.
T Consensus       206 -------~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         206 -------DNILNKPL-------QLKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             -------HHHHhCCc-------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence                   01111100       0011233467789999999999999998743

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=1.9e-18  Score=113.86  Aligned_cols=119  Identities=27%  Similarity=0.455  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++..+.... ........++..|++||.+.+..++.++|+||+|++++++++ |..||.....     ....
T Consensus       141 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~  214 (261)
T cd05034         141 VCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVL  214 (261)
T ss_pred             CEEECccccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence            47899999998764321 111112234567999999988788999999999999999998 8888742110     0000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      .        ..... ..     .+.+...+..+.+++.+||..+|.+||+++++.+.|+.
T Consensus       215 ~--------~~~~~-~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         215 E--------QVERG-YR-----MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             H--------HHHcC-CC-----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            0        00000 00     00111224567889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.73  E-value=4.1e-18  Score=113.66  Aligned_cols=134  Identities=18%  Similarity=0.172  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........ .......++..|+|||++.+. .++.++||||||++++++++|..|+........ +....
T Consensus       138 ~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~  215 (288)
T cd07833         138 VLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQ  215 (288)
T ss_pred             CEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            579999999987654321 122334678889999998877 788999999999999999999988753211110 00000


Q ss_pred             h--hhccchhhhhc--cccchh---------hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S--ESLPDRLTEVV--DTNLVR---------EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~--~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .  ...........  +.....         .......+......+.+++.+||+.+|++|||+++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         216 KCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             HHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0  00000000000  000000         000000111235678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.73  E-value=2.2e-18  Score=113.26  Aligned_cols=115  Identities=20%  Similarity=0.279  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......  .......|++.|++||.+.+..++.++|+||||++++++++|..|+....     ..... 
T Consensus       139 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~-  210 (256)
T cd08218         139 TIKLGDFGIARVLNSTV--ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLV-  210 (256)
T ss_pred             CEEEeeccceeecCcch--hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHH-
Confidence            47899999998764322  11223457888999999988888899999999999999999999874311     11110 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..........      .+......+.+++.+||+.+|.+||++.+|+++
T Consensus       211 -------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         211 -------LKIIRGSYPP------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             -------HHHhcCCCCC------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                   1111111000      112334568889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.73  E-value=1.4e-18  Score=114.09  Aligned_cols=115  Identities=22%  Similarity=0.243  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+........  ......|+..|+|||.+.+..++.++|+||||++++++++|..||.....     .... 
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~-  209 (255)
T cd08219         138 KVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLI-  209 (255)
T ss_pred             cEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHH-
Confidence            478999999987643211  12234678889999999888889999999999999999999999853110     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..........      .+......+.+++.+||+.+|.+||++.+++..
T Consensus       210 -------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         210 -------LKVCQGSYKP------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             -------HHHhcCCCCC------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                   0000000000      011233457789999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.73  E-value=5.3e-18  Score=116.40  Aligned_cols=132  Identities=17%  Similarity=0.110  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......++..|++||.+.+..++.++||||+||+++++++|..||..... .........
T Consensus       156 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~  231 (353)
T cd07850         156 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIE  231 (353)
T ss_pred             CEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHH
Confidence            47999999998764322   12234578899999999888899999999999999999999998753211 000111000


Q ss_pred             h---hcc-------chhhhhccccc-------hhh-------hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 E---SLP-------DRLTEVVDTNL-------VRE-------EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~---~~~-------~~~~~~~~~~~-------~~~-------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ...       ...........       ...       .............+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0   000       00000000000       000       00000011335567899999999999999999999976

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.73  E-value=5.5e-19  Score=132.22  Aligned_cols=118  Identities=19%  Similarity=0.179  Sum_probs=82.7

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+|++|||.|+.+..+..  ....+...||+-|||||++.+.+   ...++||||+|||+.||++|+.|+.....   .+
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---e~ 1448 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---EW 1448 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---hh
Confidence            369999999998764421  12234678999999999987643   56789999999999999999999754221   11


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...+.         +..+    ..+  +.|.....+..+++..||+.||+.|.++.|++++
T Consensus      1449 aIMy~---------V~~g----h~P--q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1449 AIMYH---------VAAG----HKP--QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHhH---------Hhcc----CCC--CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            11111         1101    111  1233456677899999999999999999888765

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.73  E-value=5.4e-18  Score=112.86  Aligned_cols=116  Identities=22%  Similarity=0.273  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC----CCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++......   ......++..|++||.+.+    ..++.++|+||||++++++++|..|+.........+ 
T Consensus       142 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-  217 (283)
T cd06617         142 QVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL-  217 (283)
T ss_pred             CEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH-
Confidence            47999999998754221   1223457888999998754    346789999999999999999999975321110000 


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 ........    ...+ ....+..+.+++.+||+.+|.+||++.+++++
T Consensus       218 -----------~~~~~~~~----~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         218 -----------KQVVEEPS----PQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             -----------HHHHhcCC----CCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                       00000000    0000 01133567889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=4.3e-18  Score=112.78  Aligned_cols=122  Identities=19%  Similarity=0.281  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC--ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI--VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++...............++..|++||......  ++.++|+||||++++++++|..|+.....    ....
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~  221 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAM  221 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHH
Confidence            47899999997653221111122345788999999876644  78899999999999999999999743111    1101


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .... .......+...         ........+.+++.+||..+|++|||+.+|+++
T Consensus       222 ~~~~-~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         222 FKLG-NKRSAPPIPPD---------VSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHhh-ccccCCcCCcc---------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            0000 00000000000         001234568889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.73  E-value=4.5e-18  Score=112.03  Aligned_cols=115  Identities=19%  Similarity=0.250  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......++..|++||.+.+..++.++|+||||++++++++|..|+....  .........
T Consensus       148 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~  223 (265)
T cd08217         148 NVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIK  223 (265)
T ss_pred             CEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHh
Confidence            579999999987653321  1223467889999999988788899999999999999999999975321  111111110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 ......      .+......+.+++.+|++.+|++||++.+|+++
T Consensus       224 -----------~~~~~~------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         224 -----------EGKFRR------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             -----------cCCCCC------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                       010000      112234568899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=7.3e-18  Score=113.87  Aligned_cols=67  Identities=21%  Similarity=0.285  Sum_probs=51.4

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||++..+..... ........++..|+|||.+.+. .++.++||||||++++++++|..|+..
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~  218 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG  218 (316)
T ss_pred             eEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence            479999999987643321 1122334678889999987654 578899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.73  E-value=3.1e-18  Score=112.79  Aligned_cols=110  Identities=21%  Similarity=0.319  Sum_probs=73.7

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcC-CCCCccCCCccchHHhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKK-KPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~   80 (153)
                      +|++|||.+.....      .....++..|++||.+.+. .++.++||||||++++++++|. .|+... ... ......
T Consensus       147 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~~~-~~~~~~  218 (258)
T cd05078         147 IKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-DSQ-KKLQFY  218 (258)
T ss_pred             EEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-cHH-HHHHHH
Confidence            68999999875432      1223567889999998764 5788999999999999999985 443211 000 000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                                  ...     ...  +.....++.+++.+||+.+|++|||++++++.|+
T Consensus       219 ------------~~~-----~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         219 ------------EDR-----HQL--PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ------------Hcc-----ccC--CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                        000     000  1112245789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=7.6e-18  Score=112.40  Aligned_cols=117  Identities=21%  Similarity=0.259  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC------CccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG------IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      .+||+|||++..+....    .....++..|++||.+.+.      .++.++|+|||||+++++++|..||......  .
T Consensus       141 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~  214 (286)
T cd06622         141 QVKLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--N  214 (286)
T ss_pred             CEEEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--h
Confidence            47999999997653221    2223577889999987543      3578899999999999999999998532110  0


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ....        .........      ...+......+.+++.+||+.+|++||++.+++++-
T Consensus       215 ~~~~--------~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~  263 (286)
T cd06622         215 IFAQ--------LSAIVDGDP------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP  263 (286)
T ss_pred             HHHH--------HHHHhhcCC------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence            0000        011111000      011123455678899999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.73  E-value=3.1e-18  Score=113.07  Aligned_cols=119  Identities=19%  Similarity=0.144  Sum_probs=78.5

Q ss_pred             ceEecccccceeccCCCC----CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDG----SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~----~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++........    ........++..|+|||...+..++.++|+||+|++++++++|..||.....    ..
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~  215 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LA  215 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HH
Confidence            478999999886532111    1111234578899999999888889999999999999999999999853211    00


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...........    .+.         .+......+.+++.+||+.+|.+||++.|++++
T Consensus       216 ~~~~~~~~~~~----~~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         216 AMFYIGAHRGL----MPR---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HHHHhhhccCC----CCC---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00000000000    000         011233457889999999999999999999863

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.73  E-value=3.7e-18  Score=112.13  Aligned_cols=115  Identities=30%  Similarity=0.450  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......     .....+..|++||.+.+..++.++|+||||++++++++ |..|+.....  .......
T Consensus       138 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~  210 (254)
T cd05083         138 VAKVSDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--KEVKECV  210 (254)
T ss_pred             cEEECCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHH
Confidence            57999999987643211     11233567999999887788999999999999999997 8888743111  0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      .            .....     ..+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus       211 ~------------~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         211 E------------KGYRM-----EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             h------------CCCCC-----CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            0            00000     0012234567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.73  E-value=3.7e-18  Score=111.53  Aligned_cols=116  Identities=19%  Similarity=0.228  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+........   .....++..|++||.+.+..++.++|+||||++++++++|..|+......  .......
T Consensus       136 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~  210 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFKIA  210 (253)
T ss_pred             eEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHH
Confidence            478999999987653321   23346788999999988777889999999999999999999987532110  0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .    ...............+.+++.+||+.+|++|||+.|++++
T Consensus       211 -----------~----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         211 -----------T----NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             -----------h----cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                       0    0000001111124568889999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.73  E-value=6.7e-18  Score=113.81  Aligned_cols=113  Identities=20%  Similarity=0.256  Sum_probs=76.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++......      ....+++.|++||.+.   ...++.++||||||++++++++|..|+......    . 
T Consensus       153 ~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~----~-  221 (307)
T cd06607         153 TVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----S-  221 (307)
T ss_pred             CEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH----H-
Confidence            4799999998765322      2235778899999874   345888999999999999999999987431110    0 


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ...        .....    ..... ........+.+++.+||+.+|++||++.+|+.+.
T Consensus       222 ~~~--------~~~~~----~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         222 ALY--------HIAQN----DSPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             HHH--------HHhcC----CCCCC-CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            000        00000    00000 0122345688999999999999999999998853

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.73  E-value=3.7e-18  Score=116.43  Aligned_cols=136  Identities=17%  Similarity=0.132  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCcc--chH
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT--NLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~--~~~   77 (153)
                      .+||+|||+++....... ........|+..|+|||.+.+ ..++.++||||+|++++++++|..||........  ...
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~  223 (336)
T cd07849         144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL  223 (336)
T ss_pred             CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            579999999987543221 111233467889999998654 4688899999999999999999998853211000  000


Q ss_pred             Hhhhhhccchhhhhccccchh------hhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVR------EEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ........+............      .....+   ........+.+++.+||+.+|++|||+.|++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         224 GVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000000011111111100000      000000   001224568899999999999999999999987

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=6.2e-18  Score=113.12  Aligned_cols=134  Identities=17%  Similarity=0.148  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......++..|++||.+.+. .++.++||||||++++++++|..||.........+....
T Consensus       141 ~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~  218 (291)
T cd07870         141 ELKLADFGLARAKSIPS--QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIW  218 (291)
T ss_pred             cEEEeccccccccCCCC--CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHH
Confidence            47999999987643221  112233568899999988654 578889999999999999999999853222111111100


Q ss_pred             h-hhc------------cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S-ESL------------PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . .+.            +...........................+.+++.+|+..+|++|||+.|++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         219 TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             HHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            0 000            00000000000000000000001123567789999999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.73  E-value=5.8e-18  Score=112.83  Aligned_cols=133  Identities=23%  Similarity=0.224  Sum_probs=77.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......++..|++||.+.+. .++.++||||||++++++++|..||....... ......
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~  214 (284)
T cd07860         138 AIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIF  214 (284)
T ss_pred             CEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH
Confidence            579999999886543221  12233567889999987654 36788999999999999999999875321111 111111


Q ss_pred             hhh-ccch-h----hhhcc--ccchhh-hhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES-LPDR-L----TEVVD--TNLVRE-EQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~-~~~~-~----~~~~~--~~~~~~-~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ... .+.. .    .....  ...... .... .........+.+++.+||+.||++|||+.+++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         215 RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            100 0000 0    00000  000000 0000 0001123457789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.72  E-value=6.6e-18  Score=125.57  Aligned_cols=126  Identities=17%  Similarity=0.193  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCC----------------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCC
Q 043099            2 VAHVSDFGISKLLGEGDG----------------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP   65 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~----------------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p   65 (153)
                      .+||+|||+++.......                .......+||+.|+|||.+.+..++.++||||+||+++++++|..|
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            478999999987621100                0011234689999999999888899999999999999999999999


Q ss_pred             CCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-HHHHHHHHHHHHHH
Q 043099           66 TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-MTDAAAKLKKIREK  144 (153)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~l~~~~~~  144 (153)
                      |...........           .....+      .........+..+.+++.+|++.+|++|++ +.++++.|+...+.
T Consensus       231 F~~~~~~ki~~~-----------~~i~~P------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        231 YRRKKGRKISYR-----------DVILSP------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             CCCcchhhhhhh-----------hhccCh------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            854211100000           000000      000001223456778999999999999965 67777777776543

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=3.5e-18  Score=113.69  Aligned_cols=117  Identities=20%  Similarity=0.287  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .++|+|||++.......  .......+++.|++||.+.     ...++.++|+||||++++++++|..|+......    
T Consensus       141 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----  214 (280)
T cd06611         141 DVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----  214 (280)
T ss_pred             CEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----
Confidence            47899999987653221  1223346788999999864     334778899999999999999999997532110    


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . ..        ......    ..+....+......+.+++.+||+.+|.+||++.+++++
T Consensus       215 ~-~~--------~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         215 R-VL--------LKILKS----EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             H-HH--------HHHhcC----CCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            0 00        000000    000011112234567889999999999999999999887

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.72  E-value=5e-18  Score=111.47  Aligned_cols=117  Identities=32%  Similarity=0.445  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||++......... ......+++.|++||...+..++.++|+||+|++++++++ |..|+...     ......
T Consensus       141 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~  214 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYY-KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVL  214 (258)
T ss_pred             eEEEcccCCceeccccccc-ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHH
Confidence            4799999999876543211 1112236788999999877788999999999999999998 67776421     001110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      .        .........      .+...+..+.+++.+||..+|++|||+.|+++.|
T Consensus       215 ~--------~~~~~~~~~------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      215 E--------YLKKGYRLP------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             H--------HHhcCCCCC------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            0        000000000      0112345688899999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.72  E-value=4e-18  Score=114.57  Aligned_cols=133  Identities=13%  Similarity=0.093  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......+++.|++||.+.+. .++.++||||+|++++++++|..||...... .......
T Consensus       142 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~  218 (301)
T cd07873         142 ELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIF  218 (301)
T ss_pred             cEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            479999999976532221  12233568899999987654 5788999999999999999999998542211 0011000


Q ss_pred             h---hhccchhhhhcccc------chhhhhcc--hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVDTN------LVREEQNF--SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+.......      ........  .........+.+++.+||..||.+|||+.|++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         219 RILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             HHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            0   00011111110000      00000000  0001223467889999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.72  E-value=2.7e-18  Score=126.11  Aligned_cols=118  Identities=15%  Similarity=0.159  Sum_probs=79.9

Q ss_pred             EecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhh
Q 043099            4 HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSES   83 (153)
Q Consensus         4 kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~   83 (153)
                      ++.|||.++..............+||+.|++||++.+..++.++|||||||++||+++|..||....     ....+   
T Consensus       518 ~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~-----~~~~~---  589 (669)
T cd05610         518 IGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET-----PQQVF---  589 (669)
T ss_pred             ccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHH---
Confidence            4678888776543322223344689999999999988889999999999999999999999975321     11111   


Q ss_pred             ccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           84 LPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                           ..++...+....    ........+.+++..||..+|.+||++.|++++-
T Consensus       590 -----~~il~~~~~~p~----~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~  635 (669)
T cd05610         590 -----QNILNRDIPWPE----GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP  635 (669)
T ss_pred             -----HHHHhcCCCCCc----ccccCCHHHHHHHHHHcccChhHCcCHHHHHhCH
Confidence                 111111110000    0012334567888999999999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.72  E-value=4.5e-18  Score=117.86  Aligned_cols=96  Identities=21%  Similarity=0.235  Sum_probs=61.9

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+||+.|+|||++.+..++.++|||||||+++++++|..||.......  ..           ..+......   ...+.
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~-----------~~i~~~~~~---~~~~~  271 (381)
T cd05626         208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE--TQ-----------LKVINWENT---LHIPP  271 (381)
T ss_pred             ccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH--HH-----------HHHHccccc---cCCCC
Confidence            468999999999988889999999999999999999999985321100  00           001000000   00000


Q ss_pred             hHHHHHHHHHHHhh--ccccCCCCCCCHHHHHHH
Q 043099          106 KLDCLLSIMYLALD--CCMESPEQRICMTDAAAK  137 (153)
Q Consensus       106 ~~~~~~~~~~l~~~--cl~~~p~~Rps~~evl~~  137 (153)
                      ......++.+++.+  |+..++..|+++.|++.+
T Consensus       272 ~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         272 QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            01122345566655  556667779999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.72  E-value=5e-18  Score=119.27  Aligned_cols=112  Identities=21%  Similarity=0.175  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|||.++.....     .-..+-|..|.|||++....|+.++|+||+|+++|+|++|+.|+.....+ ..+     
T Consensus       454 ~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei-----  522 (612)
T KOG0603|consen  454 HLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEI-----  522 (612)
T ss_pred             cEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHH-----
Confidence            4799999999876533     11123477899999999889999999999999999999999998653332 111     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                            ...+..+...         ........+|+.+||+.||.+|+++.|+..+=.
T Consensus       523 ------~~~i~~~~~s---------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w  565 (612)
T KOG0603|consen  523 ------HTRIQMPKFS---------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPW  565 (612)
T ss_pred             ------HHhhcCCccc---------cccCHHHHHHHHHhccCChhhCcChhhhccCcc
Confidence                  1111111111         234456788999999999999999999987643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.72  E-value=7.4e-18  Score=126.07  Aligned_cols=115  Identities=21%  Similarity=0.202  Sum_probs=73.5

Q ss_pred             ceEecccccceeccCCCC--------------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDG--------------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--------------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .+|++|||+++.......              ........||+.|+|||++.+..++.++|||||||+++||++|..|+.
T Consensus       137 ~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~  216 (793)
T PLN00181        137 TTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE  216 (793)
T ss_pred             cccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence            467888988875321000              001112468889999999988889999999999999999999877653


Q ss_pred             ccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           68 EMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ......        ...     ...     ...........++.+||+.+|.+||++.|++++
T Consensus       217 ~~~~---~~~~~~--------~~~-----~~~-----~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        217 EKSR---TMSSLR--------HRV-----LPP-----QILLNWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             hHHH---HHHHHH--------Hhh-----cCh-----hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            2100   000000        000     000     001112334577889999999999999999876

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=1.4e-17  Score=109.84  Aligned_cols=120  Identities=22%  Similarity=0.271  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcc--cccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMT--QTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++...........  .....++..|++||.+.+..   ++.++||||||++++++++|..||......   .
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~  213 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---F  213 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---H
Confidence            479999999987653321111  11245678899999987655   788999999999999999999998532111   0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....         ...    ...+..+........+.+++.+||+.+|.+||++.+++.+
T Consensus       214 ~~~~~---------~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         214 QIMFH---------VGA----GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             HHHHH---------Hhc----CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00000         000    0000011111224556789999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.72  E-value=1.9e-18  Score=117.19  Aligned_cols=109  Identities=17%  Similarity=0.159  Sum_probs=74.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||....     ..... 
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~-  205 (321)
T cd05603         134 HVVLTDFGLCKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMY-  205 (321)
T ss_pred             CEEEccCCCCccCCCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHH-
Confidence            47999999987542221  12334568999999999988889999999999999999999999985311     01110 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT  132 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  132 (153)
                             ..+.....       ..+......+.+++.+||+.+|.+|+++.
T Consensus       206 -------~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         206 -------DNILHKPL-------QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             -------HHHhcCCC-------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                   11111100       01112234577899999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=9.5e-18  Score=111.42  Aligned_cols=116  Identities=19%  Similarity=0.295  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||++.......  .......|+..|++||.+.+. .++.++|+||||++++++++|..|+......     ...
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~  211 (277)
T cd06917         139 NVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAM  211 (277)
T ss_pred             CEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhh
Confidence            47899999998765432  122334688899999987653 5788999999999999999999997532110     000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..     ........       .. .......+.+++.+||+.+|++||++.|++.+
T Consensus       212 ~~-----~~~~~~~~-------~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         212 ML-----IPKSKPPR-------LE-DNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             hc-----cccCCCCC-------CC-cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            00     00000000       00 01133467889999999999999999999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.72  E-value=1.3e-17  Score=111.22  Aligned_cols=133  Identities=20%  Similarity=0.168  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......  .......++..|++||++.+. .++.++||||||++++++++|..|+..... ........
T Consensus       138 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~  214 (286)
T cd07846         138 VVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHII  214 (286)
T ss_pred             cEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHH
Confidence            47999999998764332  122334678899999987653 477889999999999999999888743211 00000000


Q ss_pred             h--hhccchhhhh----------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S--ESLPDRLTEV----------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .  ..........          .....................+.+++.+||+.+|++||++.+++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         215 KCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             HHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0  0000000000          0000000000000011234668899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.71  E-value=1.1e-17  Score=113.75  Aligned_cols=120  Identities=16%  Similarity=0.217  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc-cchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK-TNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~   80 (153)
                      .+||+|||+++......  ......+|++.|+|||.+.+..++.++|||||||+++++++|..||....... .......
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~  211 (327)
T cd05617         134 HIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL  211 (327)
T ss_pred             CEEEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence            47999999997532211  12234578999999999988889999999999999999999999985322111 1111110


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM------TDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~~  137 (153)
                      .       .......       ...+......+.+++.+||+.||++|+++      .+++.+
T Consensus       212 ~-------~~~~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         212 F-------QVILEKP-------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             H-------HHHHhCC-------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            0       0000000       00111233457789999999999999984      566554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.71  E-value=1.4e-17  Score=111.07  Aligned_cols=132  Identities=20%  Similarity=0.204  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||++........  ......++..|++||.+.+ ..++.++|+||||++++++++|..||........ .....
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~  214 (286)
T cd07847         138 QIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIR  214 (286)
T ss_pred             cEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence            479999999987654321  1223356788999998765 4578899999999999999999999854221110 10000


Q ss_pred             ---hhhccchhhhhcccc-----chhhhhcc-----hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 ---SESLPDRLTEVVDTN-----LVREEQNF-----SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ---~~~~~~~~~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         ...... ........     ........     .........+.+++.+||+.+|++||++.|++.+
T Consensus       215 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         215 KTLGDLIPR-HQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             HHhCCCChH-HhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence               000000 00000000     00000000     0001224567899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.71  E-value=2.7e-17  Score=109.47  Aligned_cols=133  Identities=18%  Similarity=0.165  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.+........  ......++..|++||.+.+. .++.++|+||+|++++++++|+.||...... .......
T Consensus       136 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~  212 (283)
T cd05118         136 VLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIF  212 (283)
T ss_pred             cEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            479999999987754321  12234577889999988776 6889999999999999999999887432110 0000000


Q ss_pred             h---hhccchhhhhcc---c---cchh--hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVD---T---NLVR--EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~---~---~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ...+..+.....   .   ....  ..............+.+++.+||+.+|.+||++.+++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            0   000000000000   0   0000  000001113345678899999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.71  E-value=7.2e-18  Score=113.57  Aligned_cols=121  Identities=17%  Similarity=0.122  Sum_probs=75.3

Q ss_pred             ceEecccccceeccCCCC-------------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG-------------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-------------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|||+++.......             ........++..|++||.+.+..++.++|+||||++++++++|..||..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            579999999874211100             0011123567889999998888899999999999999999999999742


Q ss_pred             cCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           69 MFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ..     ......        ..........    ......+..+.+++.+||+.+|++||++.++++.|+
T Consensus       219 ~~-----~~~~~~--------~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         219 DT-----PEELFG--------QVISDDIEWP----EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             CC-----HHHHHH--------HHHhcccCCC----CccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            11     001100        0000000000    000123446789999999999999999654444443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.71  E-value=3.1e-18  Score=117.10  Aligned_cols=122  Identities=23%  Similarity=0.321  Sum_probs=85.3

Q ss_pred             ceEecccccceeccCCCC---CcccccccccccccCcCccCCCC----ccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDG---SMTQTMTMATIGYMAPEYGSNGI----VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~---~~~~~~~~g~~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      ++||+|||.+..+.....   .......+|||.|+|||...+..    .+.+.||||+|+++|-++.|+.||.....   
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~---  324 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE---  324 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---
Confidence            589999999987632211   11223368999999999887632    44779999999999999999999843111   


Q ss_pred             chHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           75 NLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                                .+...+++     ..+-.++...+....+.+++.++|..||++|.++.+|..+.+.-
T Consensus       325 ----------~~l~~KIv-----n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt  376 (576)
T KOG0585|consen  325 ----------LELFDKIV-----NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT  376 (576)
T ss_pred             ----------HHHHHHHh-----cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence                      11112222     22222333345667788999999999999999999998776543

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.71  E-value=9.7e-18  Score=111.92  Aligned_cols=117  Identities=17%  Similarity=0.223  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++.......  .......++..|++||.+.+..++.++|+||||++++++++|..|+......    .... 
T Consensus       154 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~-  226 (286)
T cd06614         154 SVKLADFGFAAQLTKEK--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALF-  226 (286)
T ss_pred             CEEECccchhhhhccch--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHH-
Confidence            47899999987654321  1122335678899999988878899999999999999999999997431110    0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .......    .........+..+.+++.+||+.+|.+||++.+++.+
T Consensus       227 --------~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         227 --------LITTKGI----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             --------HHHhcCC----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                    0000000    0001112234568889999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.71  E-value=2.7e-17  Score=111.09  Aligned_cols=135  Identities=16%  Similarity=0.142  Sum_probs=80.2

Q ss_pred             ceEecccccceeccCCCC-----CcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-----~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      .+||+|||.+........     ........++..|++||.+..  ..++.++|+|||||+++++++|..||........
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~  218 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM  218 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            478999999876532211     111123346778999998765  3578899999999999999999999864222111


Q ss_pred             chHHhhhhhccchhh---------hhc------cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           75 NLRNWVSESLPDRLT---------EVV------DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. .......+..+.         ...      ....................+.+++.+||+.+|++|||+.|++.+
T Consensus       219 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         219 LL-EKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             HH-HHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            11 111100000000         000      000000001111122334578899999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.71  E-value=9.1e-19  Score=118.59  Aligned_cols=110  Identities=22%  Similarity=0.232  Sum_probs=75.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|++||.+.+..++.++|||||||+++++++|..||.....     .... 
T Consensus       136 ~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~-  207 (318)
T cd05582         136 HIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETM-  207 (318)
T ss_pred             cEEEeeccCCcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHH-
Confidence            47999999998653321  122335689999999999888889999999999999999999999853211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTD  133 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  133 (153)
                             ..+.....       ..+......+.+++.+||+.+|++||++.+
T Consensus       208 -------~~i~~~~~-------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         208 -------TMILKAKL-------GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             -------HHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                   00100000       011122345778999999999999999444

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.71  E-value=5.9e-18  Score=116.83  Aligned_cols=119  Identities=18%  Similarity=0.231  Sum_probs=75.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC----CccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG----IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++....... ........||+.|+|||++.+.    .++.++||||+||+++++++|..||.....     .
T Consensus       180 ~~kL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----~  253 (370)
T cd05621         180 HLKLADFGTCMKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-----V  253 (370)
T ss_pred             CEEEEecccceecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-----H
Confidence            58999999998764322 1122345789999999988653    377899999999999999999999853211     0


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCC--CCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPE--QRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~--~Rps~~evl~~  137 (153)
                      ..        ...+......   ...+........+.+++.+|+..++.  .|+++.|++++
T Consensus       254 ~~--------~~~i~~~~~~---~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         254 GT--------YSKIMDHKNS---LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HH--------HHHHHhCCcc---cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            00        0111110000   00111112234566777788875554  38899999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.71  E-value=6.6e-18  Score=115.24  Aligned_cols=138  Identities=20%  Similarity=0.171  Sum_probs=82.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH--
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN--   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~--   78 (153)
                      .+||+|||+++......  .......++..|++||.+.. ..++.++|||||||+++++++|..||...... .....  
T Consensus       146 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~  222 (337)
T cd07858         146 DLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLIT  222 (337)
T ss_pred             CEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHH
Confidence            47999999998764321  11223457888999998764 36889999999999999999999987532110 00000  


Q ss_pred             -hhhhhccchhhhhccccchh--------hhhc-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 043099           79 -WVSESLPDRLTEVVDTNLVR--------EEQN-FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIR  142 (153)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~  142 (153)
                       .........+..........        .... ..........+.+++.+||+.+|.+|||++|++++  +..++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         223 ELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence             00000000000000000000        0000 00012345668899999999999999999999988  65543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.71  E-value=6.4e-18  Score=116.69  Aligned_cols=120  Identities=17%  Similarity=0.213  Sum_probs=75.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC----CccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG----IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++...... ........||+.|+|||++.+.    .++.++||||+||++++|++|..||.....     .
T Consensus       180 ~ikL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~  253 (371)
T cd05622         180 HLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----V  253 (371)
T ss_pred             CEEEEeCCceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----H
Confidence            58999999998764322 1222345799999999988653    278899999999999999999999853111     0


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQ--RICMTDAAAKL  138 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~l  138 (153)
                      ...        ..+.....   ...++........+.+++.+|+..++.+  |+++.|++++.
T Consensus       254 ~~~--------~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         254 GTY--------SKIMNHKN---SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             HHH--------HHHHcCCC---cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            000        11110000   0001111223445677888888744433  78999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.71  E-value=1.3e-18  Score=118.14  Aligned_cols=110  Identities=18%  Similarity=0.165  Sum_probs=74.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++|||||||+++++++|..||....     ..... 
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~-  205 (325)
T cd05604         134 HVVLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMY-  205 (325)
T ss_pred             CEEEeecCCcccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHH-
Confidence            47999999987543211  12234568999999999988889999999999999999999999985311     00111 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTD  133 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  133 (153)
                             .........-       .......+.+++.+|++.+|.+||++.+
T Consensus       206 -------~~~~~~~~~~-------~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         206 -------DNILHKPLVL-------RPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             -------HHHHcCCccC-------CCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence                   1111111000       0112345678999999999999998853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.71  E-value=2.1e-17  Score=112.73  Aligned_cols=134  Identities=19%  Similarity=0.186  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCC---cccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGS---MTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~---~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++........   .......|+..|++||.+.+. .++.++||||||++++++++|+.||....... ...
T Consensus       145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~  223 (337)
T cd07852         145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLE  223 (337)
T ss_pred             cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHH
Confidence            5799999999876432211   122334688899999987553 57889999999999999999999875322110 000


Q ss_pred             Hhhhhhc---cchh--------hhhccccchhhh-hcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESL---PDRL--------TEVVDTNLVREE-QNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~---~~~~--------~~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .......   ...+        ..... .+.... ... .........+.+++.+||+.+|.+|||+.+++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         224 KIIEVIGPPSAEDIESIKSPFAATMLD-SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhCCCCHHHHHHHHhhhHHHhhh-hcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000000   0000        00000 000000 000 0001235678899999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.71  E-value=1.3e-17  Score=112.97  Aligned_cols=116  Identities=19%  Similarity=0.221  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++......      ....+++.|++||.+.   ...++.++||||||++++++++|..|+...... .... 
T Consensus       163 ~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~-  234 (317)
T cd06635         163 QVKLADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALY-  234 (317)
T ss_pred             CEEEecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHH-
Confidence            4789999998754321      2235788899999863   346888999999999999999999987431100 0000 


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                                 .........     .........+.+++.+||+.+|.+||++.++++++..+
T Consensus       235 -----------~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         235 -----------HIAQNESPT-----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             -----------HHHhccCCC-----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence                       000000000     00112334578899999999999999999999875543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.71  E-value=8.8e-18  Score=111.47  Aligned_cols=119  Identities=22%  Similarity=0.302  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|++||.+.+..++.++||||||++++++++ |..||.....     ....
T Consensus       155 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-----~~~~  228 (275)
T cd05046         155 EVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-----EEVL  228 (275)
T ss_pred             cEEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-----HHHH
Confidence            46899999987543222 222233356778999999887778899999999999999998 6777642111     0111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...        .......     ..+...+..+.+++.+||+.+|.+|||+.|++..|.
T Consensus       229 ~~~--------~~~~~~~-----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         229 NRL--------QAGKLEL-----PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHH--------HcCCcCC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            100        0000000     001123346888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.71  E-value=1.1e-17  Score=114.02  Aligned_cols=136  Identities=18%  Similarity=0.171  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++........  .......++..|++||.+.+ ..++.++||||||++++++++|..||...... .....
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~  223 (334)
T cd07855         145 ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKL  223 (334)
T ss_pred             cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHH
Confidence            4799999999876432211  11123467889999998765 35889999999999999999999998532111 00100


Q ss_pred             hhh---hhccchhhhhccccchh------hhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           79 WVS---ESLPDRLTEVVDTNLVR------EEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        79 ~~~---~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ...   ..............+..      ......   ........+.+++.+||+.+|.+||++.+++++-
T Consensus       224 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  295 (334)
T cd07855         224 ILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP  295 (334)
T ss_pred             HHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence            000   00000011000000000      000000   0012356788999999999999999999999863

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.71  E-value=1.9e-17  Score=108.63  Aligned_cols=119  Identities=19%  Similarity=0.198  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+................++..|.+||.......+.++||||||++++++++|..|+.....   .....  
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~--  213 (260)
T cd06606         139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAAL--  213 (260)
T ss_pred             CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHH--
Confidence            4789999999887543211112334678899999999887889999999999999999999999754220   00000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             .........     ...+......+.+++.+|++.+|.+||++.|++++
T Consensus       214 -------~~~~~~~~~-----~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         214 -------YKIGSSGEP-----PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             -------HhccccCCC-----cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence                   000000000     01112235678889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.71  E-value=3.2e-17  Score=107.81  Aligned_cols=111  Identities=21%  Similarity=0.347  Sum_probs=75.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhc-CCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTK-KKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++.....      .....++..|++||.+.+.  .++.++||||||++++++++| ..|+.....  .....
T Consensus       146 ~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~  217 (259)
T cd05037         146 FIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKER  217 (259)
T ss_pred             eEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHH
Confidence            479999999987532      1223456779999998776  688999999999999999984 566533111  00000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...           ......        ......+.+++.+||..+|.+|||+.+|++.|+
T Consensus       218 ~~~-----------~~~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         218 FYQ-----------DQHRLP--------MPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHh-----------cCCCCC--------CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            000           000000        001156789999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.71  E-value=8.7e-18  Score=110.38  Aligned_cols=115  Identities=19%  Similarity=0.201  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......   ......++..|++||.+.... ++.++|+||||++++++++|..||.....    .....
T Consensus       140 ~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~  212 (258)
T cd06632         140 VVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVF  212 (258)
T ss_pred             CEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHH
Confidence            57999999988764332   123345788899999887665 88999999999999999999999754221    00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....        ....      ..+......+.+++.+||+.+|.+||++.+++.+
T Consensus       213 ~~~~~--------~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         213 KIGRS--------KELP------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHhc--------ccCC------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            00000        0000      0011233567789999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.71  E-value=1.3e-17  Score=110.88  Aligned_cols=109  Identities=20%  Similarity=0.255  Sum_probs=73.4

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHH-hcCCCCCccCCCccchHHhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAF-TKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~   80 (153)
                      +|++|||++......      ....++..|++||.+.+ ..++.++||||||+++++++ +|..|+.....  .......
T Consensus       163 ~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~  234 (274)
T cd05076         163 IKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKERFY  234 (274)
T ss_pred             eeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHHHH
Confidence            689999988654221      12346778999998865 46889999999999999985 68888643111  0000010


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                                  .....     .  +......+.+++.+||+.+|++|||+.+|++.|
T Consensus       235 ------------~~~~~-----~--~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         235 ------------EKKHR-----L--PEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             ------------HhccC-----C--CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence                        00000     0  011123578899999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=1.4e-17  Score=105.01  Aligned_cols=113  Identities=18%  Similarity=0.199  Sum_probs=85.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+..-..+    .....+||.-|.+||...+..++..+|+|++|++.+|.+.|..||....           
T Consensus       162 ~lkiAdfGwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-----------  226 (281)
T KOG0580|consen  162 ELKIADFGWSVHAPSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-----------  226 (281)
T ss_pred             CeeccCCCceeecCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-----------
Confidence            4799999999875422    4556789999999999999999999999999999999999999986422           


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                             ....+.++......+  |.....+..+++.+|+..+|.+|....|++++=
T Consensus       227 -------~~etYkrI~k~~~~~--p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  227 -------HSETYKRIRKVDLKF--PSTISGGAADLISRLLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             -------hHHHHHHHHHccccC--CcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence                   111122222211111  233455678899999999999999999999874

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.70  E-value=1.3e-17  Score=111.82  Aligned_cols=117  Identities=18%  Similarity=0.216  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|||++.......  .......|++.|++||.+.+..++.++|+||+|++++++++|..|+.....  ........
T Consensus       154 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~  229 (292)
T cd06657         154 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR  229 (292)
T ss_pred             CEEEcccccceeccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence            47899999987654321  112334678899999998877888999999999999999999999742111  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...+        ..       ..........+.+++.+||..+|.+||++.+++.+
T Consensus       230 ~~~~--------~~-------~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         230 DNLP--------PK-------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             hhCC--------cc-------cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            0000        00       00011223456788999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.70  E-value=2.1e-17  Score=109.16  Aligned_cols=117  Identities=19%  Similarity=0.109  Sum_probs=76.0

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......++..|+|||.+.+..++.++||||||++++++++|..|+.....    .....
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~  219 (265)
T cd06652         144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIF  219 (265)
T ss_pred             CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHH
Confidence            4799999999865421110 111223578899999998887889999999999999999999999753110    00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ........     ...+......+.+++.+|+. +|++||+++||+++
T Consensus       220 ---------~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         220 ---------KIATQPTN-----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             ---------HHhcCCCC-----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence                     00000000     01122333456678888884 89999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.70  E-value=2.9e-17  Score=108.70  Aligned_cols=122  Identities=20%  Similarity=0.245  Sum_probs=72.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-------CCccccccchhhhHHHHHHHh-cCCCCCccCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-------GIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~   73 (153)
                      ++||+|||+++...............++..|+|||++..       ..++.++|||||||+++++++ |..|+...... 
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-  216 (269)
T cd05042         138 SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-  216 (269)
T ss_pred             cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-
Confidence            579999999875432211111222345677999997642       356789999999999999998 67776432110 


Q ss_pred             cchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           74 TNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ..+.......    ......+.         .+......+..++..|| .+|++|||++||++.|
T Consensus       217 ~~~~~~~~~~----~~~~~~~~---------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         217 QVLKQVVREQ----DIKLPKPQ---------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             HHHHHHhhcc----CccCCCCc---------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            0011000000    00000000         01123344566777787 5999999999999886

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.70  E-value=2.2e-17  Score=111.24  Aligned_cols=136  Identities=16%  Similarity=0.158  Sum_probs=77.3

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCcc-chH
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT-NLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~-~~~   77 (153)
                      .+||+|||++.........  .......++..|+|||.+.+. .++.++||||||++++++++|..|+........ ...
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~  236 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLI  236 (310)
T ss_pred             cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            4799999999876432211  112234567889999987654 478899999999999999999988753211000 000


Q ss_pred             Hhhhhhccch-hhhhcccc----ch-hhhh--cch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDR-LTEVVDTN----LV-REEQ--NFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~-~~~~~~~~----~~-~~~~--~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..+....+.. ........    .. ....  ...   .+......+.+++.+||..+|.+|||++|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         237 SQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             HHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0000000000 00000000    00 0000  000   000012356789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.70  E-value=2.6e-17  Score=109.03  Aligned_cols=114  Identities=17%  Similarity=0.223  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||+++.....      ....++..|+|||.+.+..++.++|+||+|++++++++|..|+............+..
T Consensus       148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T PHA03390        148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK  221 (267)
T ss_pred             eEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence            5789999999875422      1235788999999998888899999999999999999999998633222111111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~  137 (153)
                      ..         ...       ..........+.+++.+||+.+|.+||+ ++|++++
T Consensus       222 ~~---------~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        222 RQ---------QKK-------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             hh---------ccc-------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            00         000       0111234456888999999999999996 5888854

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.70  E-value=1.5e-17  Score=110.78  Aligned_cols=133  Identities=20%  Similarity=0.185  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||+++.......  ......++..|++||.+.+. .++.++|+||||++++++++|..||..... ........
T Consensus       137 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~  213 (283)
T cd07835         137 ALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIF  213 (283)
T ss_pred             cEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence            478999999976543221  12223567889999987654 578899999999999999999998753211 00111111


Q ss_pred             hhhc-cc--hhhhh---cc--ccchhhhh-c-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL-PD--RLTEV---VD--TNLVREEQ-N-FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~-~~--~~~~~---~~--~~~~~~~~-~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .... +.  .+...   .+  ........ . ..........+.+++.+||+.+|.+|||++|++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         214 RTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             HHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            1000 00  00000   00  00000000 0 00001123567889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.70  E-value=1.8e-18  Score=110.92  Aligned_cols=116  Identities=24%  Similarity=0.285  Sum_probs=81.0

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      +||+|||.+..+..   +...+...|...|+|||.+...  .|+-++||||+|++++|+.+|..|+..+......     
T Consensus       207 vKLCDFGIcGqLv~---SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeq-----  278 (361)
T KOG1006|consen  207 VKLCDFGICGQLVD---SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQ-----  278 (361)
T ss_pred             EeeecccchHhHHH---HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHH-----
Confidence            79999999987643   3345556788999999987643  4999999999999999999999997542221111     


Q ss_pred             hhhccchhhhhccccchhhhhcchhh---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAK---LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             +..++.+    .++....+   .+....+..++.-|+-.|-.+||+..+++..
T Consensus       279 -------l~~Vv~g----dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  279 -------LCQVVIG----DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             -------HHHHHcC----CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence                   1111111    11111111   2234568889999999999999999988764

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.70  E-value=9e-18  Score=114.01  Aligned_cols=108  Identities=20%  Similarity=0.269  Sum_probs=73.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       139 ~ikL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~--  209 (323)
T cd05615         139 HIKIADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DEL--  209 (323)
T ss_pred             CEEEeccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            47999999987643221  122334689999999999888899999999999999999999999853211     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM  131 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  131 (153)
                            ...+.....       ..+......+.+++.+||+.+|.+|++.
T Consensus       210 ------~~~i~~~~~-------~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         210 ------FQSIMEHNV-------SYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             ------HHHHHhCCC-------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence                  011111000       0011223457789999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.70  E-value=2e-17  Score=111.55  Aligned_cols=134  Identities=18%  Similarity=0.149  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......++..|+|||.+.+ ..++.++||||+|++++++++|..||..... ...+....
T Consensus       146 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~-~~~~~~~~  222 (309)
T cd07845         146 CLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE-IEQLDLII  222 (309)
T ss_pred             CEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence            479999999987653321  1222345778999998865 3578999999999999999999998753211 11111111


Q ss_pred             h---hhccchhhhhccc------cchhhhhc-ch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 S---ESLPDRLTEVVDT------NLVREEQN-FS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~---~~~~~~~~~~~~~------~~~~~~~~-~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      .   .............      ........ .. ........+.+++.+||+.||++|||+.|++.+-
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~  291 (309)
T cd07845         223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS  291 (309)
T ss_pred             HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            0   0000000000000      00000000 00 0011245577899999999999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.70  E-value=8.2e-18  Score=116.57  Aligned_cols=43  Identities=30%  Similarity=0.396  Sum_probs=39.5

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+.|+|||++.+..++.++||||+||+++++++|..||..
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            4689999999999888899999999999999999999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.70  E-value=2e-17  Score=110.83  Aligned_cols=132  Identities=18%  Similarity=0.139  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+......  .....+++.|+|||.+.+. .++.++||||||++++++++|..||..... ...+....
T Consensus       149 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~  225 (295)
T cd07837         149 LLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLHIF  225 (295)
T ss_pred             eEEEeecccceecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHH
Confidence            5799999999866432211  1223567889999987653 578999999999999999999988753211 00111111


Q ss_pred             hh---hccchhhhhcc-------ccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEVVD-------TNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ...........       ......... .........+.+++.+||..+|.+||++.|++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             HHhCCCChhhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            10   00000000000       000000000 0001234567899999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.70  E-value=1.5e-17  Score=109.08  Aligned_cols=113  Identities=25%  Similarity=0.233  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......    .....++..|++||.+.+..++.++|+||+|++++++++|..|+......  .....  
T Consensus       141 ~~kl~d~g~~~~~~~~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~--  212 (256)
T cd08530         141 LVKIGDLGISKVLKKNM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYK--  212 (256)
T ss_pred             cEEEeeccchhhhccCC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH--
Confidence            47899999998764331    22235788899999998888889999999999999999999997432110  00000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               .......      ..+.....++.+++.+||+.+|++||++.|++++
T Consensus       213 ---------~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         213 ---------VQRGKYP------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             ---------HhcCCCC------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                     0000000      0112344568899999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.70  E-value=2e-17  Score=111.60  Aligned_cols=115  Identities=19%  Similarity=0.207  Sum_probs=76.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++......      ....++..|+|||.+.   ...++.++|||||||+++++++|..|+...... ...  
T Consensus       153 ~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~--  223 (308)
T cd06634         153 LVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SAL--  223 (308)
T ss_pred             cEEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHH--
Confidence            4799999998765322      2235788899999864   335788999999999999999999987431100 000  


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                                ........ .   .. ........+.+++.+||+.+|.+||++.+|+.+-..
T Consensus       224 ----------~~~~~~~~-~---~~-~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         224 ----------YHIAQNES-P---AL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             ----------HHHhhcCC-C---Cc-CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence                      00000000 0   00 011233457789999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.70  E-value=1.6e-17  Score=123.90  Aligned_cols=118  Identities=24%  Similarity=0.254  Sum_probs=79.4

Q ss_pred             ceEecccccceecc----------------CCCCCcccccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhc
Q 043099            2 VAHVSDFGISKLLG----------------EGDGSMTQTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTK   62 (153)
Q Consensus         2 ~~kl~DfG~a~~~~----------------~~~~~~~~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g   62 (153)
                      .+||+|||++....                ........+..+||..|+|||++.+..   |+.++|+||+|+|++||+. 
T Consensus       735 ~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y-  813 (1351)
T KOG1035|consen  735 SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY-  813 (1351)
T ss_pred             CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc-
Confidence            47999999998721                011122456679999999999887654   9999999999999999984 


Q ss_pred             CCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           63 KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        63 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                        ||.+..+....+........+.             +.  .........-.+++.++++.||.+||||.|||+.
T Consensus       814 --PF~TsMERa~iL~~LR~g~iP~-------------~~--~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  814 --PFGTSMERASILTNLRKGSIPE-------------PA--DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             --cCCchHHHHHHHHhcccCCCCC-------------Cc--ccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence              4544333222222221111111             00  1123344556788999999999999999999874

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=9.2e-18  Score=115.61  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=63.0

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+||+.|+|||++....++.++|||||||+++++++|..||......     ...        ..+......   ...+.
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~-----~~~--------~~i~~~~~~---~~~~~  262 (364)
T cd05599         199 TVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ-----ETY--------RKIINWKET---LQFPD  262 (364)
T ss_pred             cccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH-----HHH--------HHHHcCCCc---cCCCC
Confidence            36899999999998888999999999999999999999998532110     000        000000000   00000


Q ss_pred             hHHHHHHHHHHHhhccccCCCCCCC---HHHHHHH
Q 043099          106 KLDCLLSIMYLALDCCMESPEQRIC---MTDAAAK  137 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~Rps---~~evl~~  137 (153)
                      .......+.+++.+|+. +|.+|++   +.|++++
T Consensus       263 ~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         263 EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            01123456678888886 8999998   9999886

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.69  E-value=4.9e-17  Score=110.58  Aligned_cols=142  Identities=18%  Similarity=0.148  Sum_probs=86.4

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .++|+|||++........ ........++..|++||.+.+. .++.++|+||+|++++++++|..||....... .....
T Consensus       141 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i  219 (330)
T cd07834         141 DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLI  219 (330)
T ss_pred             CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHH
Confidence            579999999997654321 0112334678889999998877 78899999999999999999999975432110 00000


Q ss_pred             hh---hhccchhhhhccccchh---------hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHH
Q 043099           80 VS---ESLPDRLTEVVDTNLVR---------EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIREK  144 (153)
Q Consensus        80 ~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~~  144 (153)
                      ..   ......+..........         ..............+.+++.+||+.+|.+||++.+++++  ++.+...
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         220 VEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             HHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            00   00000000000000000         000000011234668899999999999999999999986  6555544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.69  E-value=2.2e-17  Score=109.82  Aligned_cols=115  Identities=17%  Similarity=0.249  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++..+....  .......++..|++||.+.+..++.++|+||||++++++++|..|+.....  ........
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~  214 (277)
T cd06641         139 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--MKVLFLIP  214 (277)
T ss_pred             CEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--HHHHHHHh
Confidence            47899999988764321  112234578889999998877888999999999999999999998743111  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..            ...   .  .+......+.+++.+||+.+|.+||++.+++++
T Consensus       215 ~~------------~~~---~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         215 KN------------NPP---T--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             cC------------CCC---C--CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            00            000   0  011233557789999999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2.7e-18  Score=116.82  Aligned_cols=115  Identities=20%  Similarity=0.165  Sum_probs=75.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+. .++.++||||+||+++++++|..||.....     ....
T Consensus       134 ~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~  206 (330)
T cd05586         134 HIALCDFGLSKANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMY  206 (330)
T ss_pred             CEEEecCCcCcCCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHH
Confidence            47999999987643221  122345689999999988654 488999999999999999999999743111     0000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC----CHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI----CMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~evl~~  137 (153)
                              ..+......     ++ .......+.+++.+||+.+|.+||    ++.|++++
T Consensus       207 --------~~i~~~~~~-----~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         207 --------RNIAFGKVR-----FP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             --------HHHHcCCCC-----CC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence                    001000000     00 011234567899999999999998    56777664

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.69  E-value=4.2e-17  Score=107.77  Aligned_cols=121  Identities=23%  Similarity=0.281  Sum_probs=80.3

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||.+........  ........++..|++||.+.+..++.++|+||+|++++++++|..|+........ .. .
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~-~  219 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LA-L  219 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HH-H
Confidence            479999999987653211  1112234578899999998887889999999999999999999999753211100 00 0


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .........     ....+......+.+++.+||..+|.+||++.+++++
T Consensus       220 --------~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         220 --------IFKIASATT-----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             --------HHHHhccCC-----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence                    000000000     001123344568889999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.69  E-value=3.5e-17  Score=109.45  Aligned_cols=133  Identities=17%  Similarity=0.175  Sum_probs=77.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......++..|+|||.+.+ ..++.++||||+|++++++++|..||..............
T Consensus       141 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  218 (291)
T cd07844         141 ELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF  218 (291)
T ss_pred             CEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            479999999876432211  1122346788999998765 3578899999999999999999998754321111111110


Q ss_pred             h---hhccchhhhhcc---------ccchhhh--hcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVD---------TNLVREE--QNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ............         .......  .... .......+.+++.+||+.+|++|||+.|++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAP-RLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             HhcCCCChhhhhhhhhccccccccccccCChhHHHhCc-CCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence            0   000000000000         0000000  0000 01112567789999999999999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.69  E-value=1.7e-17  Score=108.96  Aligned_cols=115  Identities=24%  Similarity=0.292  Sum_probs=78.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+........  ......|++.|+|||...+..++.++|+||||++++++++|..|+....     ......
T Consensus       140 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~  212 (257)
T cd08225         140 VAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVL  212 (257)
T ss_pred             eEEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHH
Confidence            368999999987643221  1223457888999999887788899999999999999999999874311     111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        .........      .......+.+++.+||..+|++|||+.+|+++
T Consensus       213 ~--------~~~~~~~~~------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         213 K--------ICQGYFAPI------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             H--------HhcccCCCC------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            0        000000000      01123457889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.69  E-value=2.2e-17  Score=108.89  Aligned_cols=117  Identities=23%  Similarity=0.252  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......++..|++||.+.+..++.++|+||+|++++++++|..|+........   ..  
T Consensus       131 ~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~--  202 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM---EI--  202 (262)
T ss_pred             CEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH---HH--
Confidence            47899999998764321   12234678889999998877889999999999999999999999854321110   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            .........     ....+......+.+++.+||+.+|.+||+     ++|++++
T Consensus       203 ------~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         203 ------YNDILKGNG-----KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             ------HHHHhccCC-----CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence                  011110000     00111222557889999999999999999     7777663

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.69  E-value=4.2e-17  Score=108.65  Aligned_cols=134  Identities=19%  Similarity=0.197  Sum_probs=79.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........ .......++..|++||.+.+. .++.++||||||++++++++|..|+..... ........
T Consensus       138 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~  215 (287)
T cd07840         138 VLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIF  215 (287)
T ss_pred             CEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH
Confidence            579999999987654321 112233567789999977653 578899999999999999999998754221 11111111


Q ss_pred             h---hhccchhhhhcc----ccc---hhhhhcchh-hHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVD----TNL---VREEQNFSA-KLD-CLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~----~~~---~~~~~~~~~-~~~-~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ............    ...   ......... ... ....+.+++.+||+.+|.+||++.+++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         216 ELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             HHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            1   000000000000    000   000000000 011 25678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.69  E-value=2.2e-17  Score=109.99  Aligned_cols=115  Identities=17%  Similarity=0.199  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......    .....|+..|++||.+. +..++.++||||+||+++++++|..||........  . ..
T Consensus       135 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~-~~  207 (279)
T cd05633         135 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--H-EI  207 (279)
T ss_pred             CEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--H-HH
Confidence            47899999987653221    22236889999999876 34688999999999999999999999853221110  0 00


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                      ...        ...    .  ....+......+.+++.+||..+|++||     |++|++++
T Consensus       208 ~~~--------~~~----~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         208 DRM--------TLT----V--NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHH--------hhc----C--CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            000        000    0  0001122345678899999999999999     69999886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.69  E-value=3.8e-17  Score=107.61  Aligned_cols=115  Identities=20%  Similarity=0.193  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.......  ......|+..|++||...+..++.++|+||||++++++++|..|+....     ......
T Consensus       143 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~  215 (260)
T cd08222         143 LLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVL  215 (260)
T ss_pred             CEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHH
Confidence            368999999987643221  2223457788999998877778889999999999999999998874211     000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .......    +  ..+......+.+++.+||..+|++||++.|++++
T Consensus       216 --------~~~~~~~----~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         216 --------RIVEGPT----P--SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             --------HHHcCCC----C--CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence                    0000000    0  0112344577889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.69  E-value=5.4e-17  Score=111.02  Aligned_cols=136  Identities=18%  Similarity=0.162  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....++..|+|||.+.+ ..++.++||||||++++++++|+.||...... .......
T Consensus       155 ~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~  228 (342)
T cd07879         155 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQIL  228 (342)
T ss_pred             CEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            4799999998764321     223456888999998766 35888999999999999999999998532110 0011100


Q ss_pred             hh---hccchhhhhccccch---hhhhcchh------hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 043099           81 SE---SLPDRLTEVVDTNLV---REEQNFSA------KLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIRE  143 (153)
Q Consensus        81 ~~---~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~  143 (153)
                      ..   ..+............   ...+..+.      .......+.+++.+||+.+|.+||++.|++.+  ++.++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            00   000000000000000   00000000      01123457899999999999999999999976  666543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.69  E-value=4.2e-17  Score=108.69  Aligned_cols=133  Identities=16%  Similarity=0.121  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||++........ .......++..|++||.+.+. .++.++||||+|++++++++|..++..... ...+....
T Consensus       137 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~  214 (286)
T cd07832         137 VLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVF  214 (286)
T ss_pred             cEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHH
Confidence            478999999987653321 112234678899999987654 468899999999999999999766532111 11111111


Q ss_pred             hhh---ccchhhhh---------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES---LPDRLTEV---------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   ....+...         .......... .....+....+.+++.+||..+|.+|||+++++.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         215 RTLGTPNEETWPGLTSLPDYNKITFPESKPIPL-EEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHcCCCChHHHhhccCcchhhcccCCCCCcchH-HHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000   00000000         0000000000 00001234678899999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.69  E-value=5.3e-17  Score=110.61  Aligned_cols=135  Identities=20%  Similarity=0.177  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.+......  .......|+..|++||.+.+ ..++.++|+||+|++++++++|..||...... ..+..
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~  221 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQ  221 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHH
Confidence            4799999999876432211  11223468889999998765 46889999999999999999999887532210 01111


Q ss_pred             hhhh---hccchhhhhccccc--------hhhhhcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSE---SLPDRLTEVVDTNL--------VREEQNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~---~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ..............        ......+. ........+.+++.+||+.+|++|||+.|++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         222 ILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000   00000000000000        00000000 001123567899999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.68  E-value=4.7e-17  Score=107.25  Aligned_cols=118  Identities=20%  Similarity=0.255  Sum_probs=80.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||++........  ......++..|++||.+....++.++|+||||++++++++|..|+.....  ......  
T Consensus       138 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~--  211 (264)
T cd06623         138 EVKIADFGISKVLENTLD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFEL--  211 (264)
T ss_pred             CEEEccCccceecccCCC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHH--
Confidence            478999999987653321  11234578889999998888888999999999999999999999754221  001111  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLD-CLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.......      .+.. ....+.+++.+||+.+|++||++.|++++
T Consensus       212 ------~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         212 ------MQAICDGPPPS------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             ------HHHHhcCCCCC------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                  11111111100      0111 34568889999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.68  E-value=4.4e-17  Score=111.43  Aligned_cols=135  Identities=12%  Similarity=0.099  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........++..|+|||.+.+ ..++.++|||||||+++++++|..||...... ......
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~  231 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLI  231 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence            478999999987542211 111122356888999997654 46788999999999999999999998532210 000000


Q ss_pred             hhhhcc----------chhhhhccccchhhhhc-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLP----------DRLTEVVDTNLVREEQN-FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ......          ................. .........++.+++.+||+.+|.+|||+.|++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            000000          00000000000000000 00001233567889999999999999999999865

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.68  E-value=4.2e-17  Score=104.15  Aligned_cols=137  Identities=15%  Similarity=0.156  Sum_probs=83.4

Q ss_pred             ceEecccccceeccCCCCCcc--cccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCC--ccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMT--QTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG--KTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~--~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~--~~~~   76 (153)
                      ++||+|||+++.+........  -+..+-|.+|.+||.+.+. .|+++.|||..||++.+|.+|.+.++.....  -..+
T Consensus       162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~I  241 (376)
T KOG0669|consen  162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLI  241 (376)
T ss_pred             eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHH
Confidence            479999999998864332211  1234568999999988776 6999999999999999999998765421111  1112


Q ss_pred             HHhhhhhccchhhhhccccchh----h--h-hcchhhHHHH------HHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVR----E--E-QNFSAKLDCL------LSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~----~--~-~~~~~~~~~~------~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ...+....++.+..+..-.+..    +  + .....-.+..      +...+++.+++.+||++|+++.+++++.
T Consensus       242 s~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~  316 (376)
T KOG0669|consen  242 SQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD  316 (376)
T ss_pred             HHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence            2222222233332222111100    0  0 0000001111      2566788889999999999999999874

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.68  E-value=5.8e-17  Score=108.53  Aligned_cols=131  Identities=20%  Similarity=0.155  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......+++.|++||.+.+. .++.++|+||+|++++++++|..||...... .......
T Consensus       144 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~  220 (293)
T cd07843         144 ILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIF  220 (293)
T ss_pred             cEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence            479999999987654321  12234567889999988654 4688999999999999999999887532211 0111110


Q ss_pred             h---hhccchhhhh------c-----cccchhhhhcchhhHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEV------V-----DTNLVREEQNFSAKLD-CLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~------~-----~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+...      .     ..........+  +.. ....+.+++.+||+.+|++|||+.|++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         221 KLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKF--PALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             HHhCCCchHHHHHhhccchhcccccccccchhhhccc--cccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0   0000000000      0     00000000001  011 24557789999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.68  E-value=5.4e-17  Score=108.91  Aligned_cols=133  Identities=17%  Similarity=0.139  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......+++.|.+||.+.+ ..++.++|||||||+++++++|..++..... ...+....
T Consensus       140 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~  216 (298)
T cd07841         140 VLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIF  216 (298)
T ss_pred             CEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHH
Confidence            479999999987643321  1222345778999998754 3578899999999999999999766543211 11111111


Q ss_pred             hh---hccchhhhh---ccccch---hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEV---VDTNLV---REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .........   ......   ...............+.+++.+||+.+|++|||+.||+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            10   000000000   000000   0000000012234678899999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.8e-17  Score=108.26  Aligned_cols=114  Identities=18%  Similarity=0.136  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++....      .....++..|++||.+.+..++.++||||+|++++++++|..|+.....     .....
T Consensus       135 ~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~  203 (260)
T cd05611         135 HLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFD  203 (260)
T ss_pred             cEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence            478999999876432      1223577889999998877788999999999999999999999753211     00000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ..........   ..........+.+++.+||+.+|++||++.++.+.
T Consensus       204 --------~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~  248 (260)
T cd05611         204 --------NILSRRINWP---EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI  248 (260)
T ss_pred             --------HHHhcccCCC---CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence                    0000000000   00011234568899999999999999977555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.6e-17  Score=111.33  Aligned_cols=94  Identities=18%  Similarity=0.247  Sum_probs=66.5

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      ..|+..|++||.+.+..++.++||||||++++++++|..||...... ..            .........     ..+.
T Consensus       192 ~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~------------~~~~~~~~~-----~~~~  253 (316)
T cd05574         192 FVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-ET------------FSNILKKEV-----TFPG  253 (316)
T ss_pred             CcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-HH------------HHHHhcCCc-----cCCC
Confidence            46788899999998878899999999999999999999997532111 00            011111100     0111


Q ss_pred             hHHHHHHHHHHHhhccccCCCCCCC----HHHHHHH
Q 043099          106 KLDCLLSIMYLALDCCMESPEQRIC----MTDAAAK  137 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~Rps----~~evl~~  137 (153)
                      .......+.+++.+||+.+|++|||    +.|++++
T Consensus       254 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         254 SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            1124567889999999999999999    8888875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.68  E-value=3.8e-17  Score=107.16  Aligned_cols=115  Identities=23%  Similarity=0.278  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+.......  .......|++.|++||...+..++.++|+||+|++++++++|..|+....     ......
T Consensus       141 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~  213 (258)
T cd08215         141 LVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELAL  213 (258)
T ss_pred             cEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHH
Confidence            47899999998764332  12233467889999999888788999999999999999999998874321     111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        .........      +......+.+++.+||..+|++|||+.|++++
T Consensus       214 ~--------~~~~~~~~~------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         214 K--------ILKGQYPPI------PSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             H--------HhcCCCCCC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0        000000000      11233567889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.68  E-value=6.4e-18  Score=116.89  Aligned_cols=95  Identities=21%  Similarity=0.257  Sum_probs=61.9

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+|++.|+|||++.+..++.++|||||||+++++++|..||......  ...           ..+......   ...+.
T Consensus       204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~-----------~~i~~~~~~---~~~~~  267 (376)
T cd05598         204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA--ETQ-----------LKVINWETT---LHIPS  267 (376)
T ss_pred             cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH--HHH-----------HHHhccCcc---ccCCC
Confidence            46899999999998888999999999999999999999998532110  000           000000000   00000


Q ss_pred             hHHHHHHHHHHHhhccccCCCCCC---CHHHHHHH
Q 043099          106 KLDCLLSIMYLALDCCMESPEQRI---CMTDAAAK  137 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~Rp---s~~evl~~  137 (153)
                      .......+.+++.+|+ .+|.+|+   ++.|++++
T Consensus       268 ~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         268 QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            0112234555666655 4999999   89999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.68  E-value=4e-17  Score=108.66  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=77.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||++..+....    .....|+..|++||.+.+. .++.++||||+|++++++++|..||............  
T Consensus       135 ~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~--  208 (278)
T cd05606         135 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--  208 (278)
T ss_pred             CEEEccCcCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH--
Confidence            47999999987653221    2234688999999998754 5889999999999999999999998542111110000  


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                               ....    ..  ....+......+.+++.+|+..+|.+||     ++.+++++
T Consensus       209 ---------~~~~----~~--~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         209 ---------RMTL----TM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             ---------HHhh----cc--CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence                     0000    00  0001112245678899999999999999     99999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.68  E-value=3.1e-17  Score=113.04  Aligned_cols=42  Identities=31%  Similarity=0.405  Sum_probs=39.3

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .+||+.|+|||++.+..++.++|||||||++++|++|..||.
T Consensus       196 ~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             ccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence            479999999999988889999999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.68  E-value=4e-17  Score=111.68  Aligned_cols=130  Identities=20%  Similarity=0.197  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++......     .....++..|++||.+.+. .++.++||||+|++++++++|..||..... ...+....
T Consensus       156 ~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-~~~~~~i~  229 (343)
T cd07851         156 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-IDQLKRIM  229 (343)
T ss_pred             CEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH
Confidence            4799999999875432     2223567889999987653 678899999999999999999998753211 00111110


Q ss_pred             hh---hccchhhhh--------ccccchhhhhcchh-hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEV--------VDTNLVREEQNFSA-KLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .........        ...........+.. .......+.+++.+||+.+|++|||+.||+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         230 NLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            00   000000000        00000000000000 01124568899999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.68  E-value=1.2e-17  Score=115.33  Aligned_cols=94  Identities=20%  Similarity=0.250  Sum_probs=65.7

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+|||-|+|||++.+..|+..+|.||+||+++|++.|.+||.....             .+...+++..+..-   .++.
T Consensus       348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp-------------~~T~rkI~nwr~~l---~fP~  411 (550)
T KOG0605|consen  348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETP-------------QETYRKIVNWRETL---KFPE  411 (550)
T ss_pred             ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------------HHHHHHHHHHhhhc---cCCC
Confidence            4799999999999999999999999999999999999999853211             12223333222111   1111


Q ss_pred             hHHHHHHHHHHHhhccccCCCCCCC---HHHHHH
Q 043099          106 KLDCLLSIMYLALDCCMESPEQRIC---MTDAAA  136 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~Rps---~~evl~  136 (153)
                      ......+..+++.+|+. ||.+|.-   +.||.+
T Consensus       412 ~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  412 EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            22334678889999988 9999975   555544

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.67  E-value=1.7e-16  Score=105.73  Aligned_cols=132  Identities=17%  Similarity=0.163  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||++.......   ......++..|+|||.+.. ..++.++|+||||++++++++|..|+....... ......
T Consensus       137 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~  212 (283)
T cd07830         137 VVKIADFGLAREIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKIC  212 (283)
T ss_pred             CEEEeecccceeccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHH
Confidence            57999999998764322   1223457888999998744 457889999999999999999998874321100 000000


Q ss_pred             ---hhhccch------hhhhccccchhhhhc-c-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 ---SESLPDR------LTEVVDTNLVREEQN-F-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ---~~~~~~~------~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         .......      ............... . .........+.+++.+||+.+|.+|||+.|++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         213 SVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             HhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence               0000000      000000000000000 0 0001114568899999999999999999999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.67  E-value=4.3e-17  Score=109.23  Aligned_cols=133  Identities=19%  Similarity=0.159  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......+++.|++||.+.+. .++.++||||+|++++++++|..||...... ......+
T Consensus       141 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~  217 (294)
T PLN00009        141 ALKLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIF  217 (294)
T ss_pred             EEEEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            479999999976543211  12233568899999987654 5788999999999999999999987532111 1111111


Q ss_pred             h---hhccchhhhhc---cccch-h--hhhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVV---DTNLV-R--EEQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~---~~~~~-~--~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+....   +.... .  ..... .........+.+++.+|++.+|++||++.+++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        218 RILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             HHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0   00000000000   00000 0  00000 0001223457889999999999999999999875

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.67  E-value=6.7e-17  Score=108.92  Aligned_cols=135  Identities=14%  Similarity=0.107  Sum_probs=77.8

Q ss_pred             ceEecccccceeccCCCCCc---------ccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM---------TQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~---------~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .+||+|||+++.........         ......+++.|+|||.+.+. .++.++||||||++++++++|..||.....
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~  232 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD  232 (311)
T ss_pred             CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence            47999999998654322111         11233567889999987654 578899999999999999999988753221


Q ss_pred             CccchHHhhhh---hccchh------hhhccccchh-hhhcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNWVSE---SLPDRL------TEVVDTNLVR-EEQNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~~~~---~~~~~~------~~~~~~~~~~-~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . .........   ..+...      .......... ...... ........+.+++.+||+.+|.+|||+.|++.+
T Consensus       233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         233 I-DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             H-HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            1 001111100   000000      0000000000 000000 001122567899999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.67  E-value=4.8e-17  Score=108.67  Aligned_cols=123  Identities=20%  Similarity=0.168  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC--ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI--VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .++|+|||+++.+.... ........|+..|++||.+.+..  .+.++||||||++++++++|..|+...... ......
T Consensus       143 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~  220 (288)
T cd05583         143 HVVLTDFGLSKEFLAEE-EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEI  220 (288)
T ss_pred             CEEEEECcccccccccc-ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHH
Confidence            47899999988754332 11122345788999999876654  678999999999999999999997431111 001111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..        ......       .+.+......+.+++.+||+.+|++|||+.++...|+..
T Consensus       221 ~~--------~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         221 SR--------RILKSK-------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             HH--------HHHccC-------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            00        000000       001112334577899999999999999987776655543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.67  E-value=5.4e-17  Score=109.76  Aligned_cols=112  Identities=21%  Similarity=0.235  Sum_probs=74.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||++.....      .....|+..|++||.+.   ...++.++||||||++++++++|..|+...... .... 
T Consensus       159 ~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~-~~~~-  230 (313)
T cd06633         159 QVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALY-  230 (313)
T ss_pred             CEEEeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHH-
Confidence            479999999864321      12346788899999874   345788999999999999999999987432110 0000 


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .......    +... .......+.+++.+||+.+|.+||++.+++.+
T Consensus       231 -----------~~~~~~~----~~~~-~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         231 -----------HIAQNDS----PTLQ-SNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             -----------HHHhcCC----CCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                       0000000    0000 01122357789999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.67  E-value=4.6e-17  Score=110.78  Aligned_cols=131  Identities=18%  Similarity=0.211  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCc--cchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK--TNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~--~~~~~   78 (153)
                      .+||+|||.+......     .....++..|++||.+.+ ..++.++||||||++++++++|..||.......  ..+..
T Consensus       146 ~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~  220 (328)
T cd07856         146 DLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD  220 (328)
T ss_pred             CEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4789999998764321     122356788999998765 468899999999999999999998874321100  00011


Q ss_pred             hhhhhccchhhhhccccchhh------hhcchhh---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVRE------EQNFSAK---LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .......+.............      ....+..   ......+.+++.+||+.+|++||++.+++.+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            111000011111111000000      0000000   1123578899999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.67  E-value=8.5e-17  Score=108.94  Aligned_cols=114  Identities=20%  Similarity=0.207  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++..+....   -.+.++|++.|.+||++.+.+|. +.+|.||+|+++|.++.|..||+....  ..+    
T Consensus       191 NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--k~l----  261 (668)
T KOG0611|consen  191 NIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--KRL----  261 (668)
T ss_pred             Ceeeeccchhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--HHH----
Confidence            47999999999885433   34567999999999999998876 679999999999999999999853111  111    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                             ...+-...+.+.        +.+.....++++||..+|++|.|+.++..+-+
T Consensus       262 -------vrQIs~GaYrEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  262 -------VRQISRGAYREP--------ETPSDASGLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             -------HHHhhcccccCC--------CCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence                   122222222221        12223445778888999999999999987644

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.67  E-value=1.3e-17  Score=120.27  Aligned_cols=117  Identities=25%  Similarity=0.335  Sum_probs=83.0

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhc-CCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-KKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~~   79 (153)
                      .++|+|||+++.+..+... .+.....||-+|.|||.+....-..++||+|+||+++.+++| ..||......+..+   
T Consensus       649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI---  725 (903)
T KOG1027|consen  649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI---  725 (903)
T ss_pred             eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh---
Confidence            5899999999998765443 334566799999999999887777899999999999988875 88886432221111   


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                  +.....-.  ......++  +..+++.+|++++|..||+|.+|+.+
T Consensus       726 ------------l~~~~~L~--~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  726 ------------LTGNYTLV--HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             ------------hcCcccee--eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence                        11100000  00001222  67889999999999999999999976

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.66  E-value=5.6e-17  Score=107.86  Aligned_cols=117  Identities=18%  Similarity=0.207  Sum_probs=77.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+.......   ......++..|++||.+.+..++.++|+||+|++++++++|..||........ .. ...
T Consensus       133 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~-~~~  207 (277)
T cd05577         133 NVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KE-ELK  207 (277)
T ss_pred             CEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HH-HHH
Confidence            47999999987654321   12234567889999998877788999999999999999999999753221100 00 000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                              ..    .....  ...+......+.+++.+||+.+|.+||     ++.+++.+
T Consensus       208 --------~~----~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         208 --------RR----TLEMA--VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             --------hc----ccccc--ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence                    00    00000  001112345678899999999999999     77777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.66  E-value=6.9e-17  Score=108.52  Aligned_cols=134  Identities=19%  Similarity=0.202  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccch---H
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL---R   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~---~   77 (153)
                      .+||+|||++........ .......++..|++||.+.+. .++.++||||+||+++++++|+.|+..... ...+   .
T Consensus       154 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~  231 (302)
T cd07864         154 QIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELIS  231 (302)
T ss_pred             cEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH
Confidence            579999999987643321 111223457789999977543 578899999999999999999988753211 1111   1


Q ss_pred             Hhhhhhccchhhhhccccc----hhhh---hcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNL----VREE---QNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~----~~~~---~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .......+...........    ....   ... ......+..+.+++.+||+.+|.+||++.+++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1111111111110000000    0000   000 0001124568899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.66  E-value=1.7e-16  Score=105.61  Aligned_cols=132  Identities=20%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......++..|+|||.+... .++.++|+||||++++++++|..|+...... ..+....
T Consensus       136 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~  212 (282)
T cd07829         136 VLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIF  212 (282)
T ss_pred             CEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHH
Confidence            479999999987643321  12223456789999988766 7888999999999999999998887432110 0011000


Q ss_pred             h---hhccchhhhhc--------cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVV--------DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+....        .+........... ......+.+++.+||..+|++||++.+|+.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         213 QILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             HHhCCCcHHHHHhhcccccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0   00000000000        0000000000000 1124568899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=2.8e-17  Score=113.74  Aligned_cols=95  Identities=17%  Similarity=0.181  Sum_probs=61.9

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchh
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSA  105 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (153)
                      .+||+.|+|||++.+..++.++|||||||+++++++|..||......     ....        .+......   ..++.
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~--------~i~~~~~~---~~~p~  271 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH-----ETYR--------KIINWRET---LYFPD  271 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH-----HHHH--------HHHccCCc---cCCCC
Confidence            46899999999998888999999999999999999999998432110     0000        00000000   00000


Q ss_pred             hHHHHHHHHHHHhhccccCCCCC---CCHHHHHHH
Q 043099          106 KLDCLLSIMYLALDCCMESPEQR---ICMTDAAAK  137 (153)
Q Consensus       106 ~~~~~~~~~~l~~~cl~~~p~~R---ps~~evl~~  137 (153)
                      .......+.+++.+|+. +|.+|   +++.|++++
T Consensus       272 ~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         272 DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            01123456778888887 66665   599999887

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.66  E-value=5.6e-17  Score=106.81  Aligned_cols=119  Identities=18%  Similarity=0.208  Sum_probs=76.9

Q ss_pred             ceEecccccceeccCCCC------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDG------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      .+||+|||++........      ........++..|++||.......+.++|+||||++++++++|..|+.....    
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----  206 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP----  206 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----
Confidence            478999999876533211      1122334577889999998877788999999999999999999999753211    


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                       .....        ....... .    .+........+.+++.+||+.+|++|||+.++.+.|
T Consensus       207 -~~~~~--------~~~~~~~-~----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         207 -EEIFQ--------NILNGKI-E----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             -HHHHH--------HHhcCCc-C----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence             00000        0000000 0    000011245678999999999999999994444443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.66  E-value=1e-16  Score=108.98  Aligned_cols=142  Identities=15%  Similarity=0.188  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCC-C----cccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDG-S----MTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~----~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      .++++||+.+........ .    .......++..|++||++.+  ..++.++|||||||+++++++|..||........
T Consensus       139 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  218 (327)
T cd08227         139 KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  218 (327)
T ss_pred             cEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence            357788876543321100 0    01112346678999999865  3588999999999999999999999854221110


Q ss_pred             chHHhhhhhccchhh-------h--------hccccc---------hh---hhhcchhhHHHHHHHHHHHhhccccCCCC
Q 043099           75 NLRNWVSESLPDRLT-------E--------VVDTNL---------VR---EEQNFSAKLDCLLSIMYLALDCCMESPEQ  127 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~-------~--------~~~~~~---------~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  127 (153)
                       .........+....       .        ..+...         ..   .....+........+.+++.+||+.||++
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  297 (327)
T cd08227         219 -LLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDA  297 (327)
T ss_pred             -HHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchh
Confidence             00000000000000       0        000000         00   00000011123456889999999999999


Q ss_pred             CCCHHHHHHH--HHHHHHH
Q 043099          128 RICMTDAAAK--LKKIREK  144 (153)
Q Consensus       128 Rps~~evl~~--l~~~~~~  144 (153)
                      |||+.||+++  +.++.+.
T Consensus       298 Rpt~~ell~~p~f~~~~~~  316 (327)
T cd08227         298 RPSASTLLNHSFFKQIKRR  316 (327)
T ss_pred             cCCHHHHhcChhhhhcchh
Confidence            9999999985  5444433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.66  E-value=3.4e-17  Score=107.26  Aligned_cols=66  Identities=21%  Similarity=0.315  Sum_probs=53.7

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .+||+|||+++.+..+.... .....+-|.+|.|||.+.+. .|+.+.|||+.||++.|+++-.+.|.
T Consensus       174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~  241 (438)
T KOG0666|consen  174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK  241 (438)
T ss_pred             eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence            48999999999987654322 33445679999999998886 69999999999999999999776653

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.66  E-value=6.9e-17  Score=110.25  Aligned_cols=110  Identities=25%  Similarity=0.351  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|+|+|.-+..+.   .....+||.+|||||++.+..|+...|=||+||++|+|+.|+.||.....          
T Consensus       325 hvRISDLGLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke----------  391 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE----------  391 (591)
T ss_pred             CeEeeccceEEecCCCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh----------
Confidence            57899999999886554   34445899999999999999999999999999999999999999853211          


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC  130 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  130 (153)
                          ....+.++.++......++  +.-..+...+....|..||.+|.-
T Consensus       392 ----Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  392 ----KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             ----hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhcc
Confidence                1112233333333322222  334456667777788999999853

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.65  E-value=6.1e-17  Score=110.33  Aligned_cols=120  Identities=17%  Similarity=0.173  Sum_probs=73.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++..+.... ........|++.|+|||++.     ...++.++|||||||+++++++|..||.....     
T Consensus       140 ~~kL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----  213 (332)
T cd05623         140 HIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----  213 (332)
T ss_pred             CEEEeecchheecccCC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----
Confidence            57999999997653322 11223357899999999875     23578899999999999999999999853211     


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCC--CCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPE--QRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~--~Rps~~evl~~  137 (153)
                      ....        ..+.........+  .........+.+++.+|+..++.  .|+++.|++++
T Consensus       214 ~~~~--------~~i~~~~~~~~~p--~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         214 VETY--------GKIMNHKERFQFP--AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHHH--------HHHhCCCccccCC--CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            0000        0111000000000  00012334566777777755443  46899999888

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.65  E-value=2e-16  Score=105.44  Aligned_cols=133  Identities=17%  Similarity=0.127  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++........  ......++..|++||.+.+. .++.++|+||+|++++++++|..|+....... ......
T Consensus       138 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~  214 (284)
T cd07836         138 ELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIF  214 (284)
T ss_pred             cEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHH
Confidence            478999999976543221  12234567889999987654 57889999999999999999999875322111 111111


Q ss_pred             hhh---ccchhhhhcc-ccchhhhhc------chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES---LPDRLTEVVD-TNLVREEQN------FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~---~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   .......... .......+.      ..........+.+++.+|++.+|.+||++.|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         215 RIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             HHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            100   0000000000 000000000      00011234567899999999999999999999863

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=9.1e-17  Score=116.58  Aligned_cols=117  Identities=17%  Similarity=0.184  Sum_probs=89.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||.|||++..+...  .......+||+.|||||++..     ..|+.++|+||+|++-.|+..|.+|+.....     
T Consensus       161 ~VKLvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-----  233 (953)
T KOG0587|consen  161 EVKLVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-----  233 (953)
T ss_pred             cEEEeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-----
Confidence            4799999999887543  335566799999999998764     3488899999999999999999998743211     


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                  ...+....+..++....+.....++.+++..||..|-.+||++.+++++
T Consensus       234 ------------mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  234 ------------MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             ------------hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence                        1122222233333444457788999999999999999999999999875

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1e-16  Score=105.03  Aligned_cols=114  Identities=18%  Similarity=0.280  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||.+........  ......++..|++||...+..++.++|+|++|++++++++|..|+.....    ......
T Consensus       137 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~  210 (254)
T cd06627         137 VVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFR  210 (254)
T ss_pred             CEEEeccccceecCCCcc--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHH
Confidence            479999999987653321  12234578889999998777788999999999999999999998753211    000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                               .......      ..+......+.+++.+||..+|++|||+.+++.
T Consensus       211 ---------~~~~~~~------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         211 ---------IVQDDHP------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             ---------HhccCCC------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                     0000000      011223456788999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.64  E-value=3.3e-17  Score=112.75  Aligned_cols=43  Identities=30%  Similarity=0.397  Sum_probs=39.6

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+.|+|||++.+..++.++||||+||+++++++|..||..
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            4689999999999888899999999999999999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.64  E-value=2.5e-16  Score=107.38  Aligned_cols=135  Identities=17%  Similarity=0.177  Sum_probs=78.2

Q ss_pred             ceEecccccceeccCCC------------CCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGD------------GSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~------------~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||++.......            .........++..|++||.+.+. .++.++|+||+||+++++++|..|+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            47899999998764111            01111223467789999988764 478899999999999999999998753


Q ss_pred             cCCCccchHHhhh---hhccchhhhhcccc-ch---h-hhhcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           69 MFTGKTNLRNWVS---ESLPDRLTEVVDTN-LV---R-EEQNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        69 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~---~-~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .... ..+.....   ......+....... ..   . ...... ........+.+++.+||+.+|++|||+.|++.+
T Consensus       237 ~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        237 ENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             CCHH-HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            2211 00111100   00000000000000 00   0 000000 001224567889999999999999999999975

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.64  E-value=1.5e-16  Score=106.43  Aligned_cols=111  Identities=15%  Similarity=0.144  Sum_probs=77.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     .....+++.|++||.+.+..++.++||||||++++++++|..|+.....     ...  
T Consensus       139 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~--  206 (290)
T cd05580         139 YIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQI--  206 (290)
T ss_pred             CEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            4799999999876432     2233578899999998877888999999999999999999999753210     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            .........       ..+......+.+++.+||..+|.+|+     +++|++++
T Consensus       207 ------~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         207 ------YEKILEGKV-------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             ------HHHHhcCCc-------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence                  001111000       00111234677899999999999999     78888765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.64  E-value=2.2e-16  Score=102.55  Aligned_cols=116  Identities=24%  Similarity=0.231  Sum_probs=78.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+.......   ......++..|++||......++.++|||++|++++++++|..|+..... .......  
T Consensus       125 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~~~~~--  198 (244)
T smart00220      125 HVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLELFKK--  198 (244)
T ss_pred             cEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHH--
Confidence            57899999998765331   22334678889999998877888999999999999999999988743111 0000000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                                ........   ..........+.+++.+||..+|++||++.++++
T Consensus       199 ----------~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      199 ----------IGKPKPPF---PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             ----------HhccCCCC---ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence                      00000000   0000003456888999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=5.1e-17  Score=105.01  Aligned_cols=139  Identities=17%  Similarity=0.176  Sum_probs=88.3

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCC-Cc-cchH
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFT-GK-TNLR   77 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~-~~-~~~~   77 (153)
                      .++||+|||+++....++ ..+.+..+-|.+|.+||++.+. .|+.+.||||.||++.|++.++..|+.... .. ..+.
T Consensus       193 CvLKICDFGLARvee~d~-~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lIt  271 (449)
T KOG0664|consen  193 CILKICDFGLARTWDQRD-RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMII  271 (449)
T ss_pred             ceEEecccccccccchhh-hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHH
Confidence            368999999999865443 2334455678899999999886 699999999999999999988877654322 11 1111


Q ss_pred             Hh--------hhhhccchhhhhccccchhh----hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           78 NW--------VSESLPDRLTEVVDTNLVRE----EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        78 ~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      +.        ++.........+++...+..    ......+...-.+...+...++..||..|.+.++.++++..
T Consensus       272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            11        11111222223332222221    11222333334455667778899999999999998887543

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.63  E-value=1.4e-16  Score=109.07  Aligned_cols=130  Identities=18%  Similarity=0.159  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....++..|+|||.+.+ ..++.++|||||||+++++++|..||...... ..+....
T Consensus       158 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~  231 (345)
T cd07877         158 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLIL  231 (345)
T ss_pred             CEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            4799999998764321     223357888999998766 46788999999999999999999987532111 1111111


Q ss_pred             hhh---ccchhhhhcccc---chh---hhhcchh---hHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES---LPDRLTEVVDTN---LVR---EEQNFSA---KLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~---~~~~~~~~~~~~---~~~---~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   .+..........   ...   ..+....   .......+.+++.+|++.+|.+||++.+++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            000   000000000000   000   0000000   00123467899999999999999999999987

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.63  E-value=5.1e-16  Score=105.63  Aligned_cols=116  Identities=20%  Similarity=0.315  Sum_probs=68.6

Q ss_pred             ccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhc--------cchhh--------
Q 043099           28 ATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESL--------PDRLT--------   89 (153)
Q Consensus        28 g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~--------   89 (153)
                      ++..|++||.+.+.  .++.++||||+||+++++++|..||..................        +....        
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG  249 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence            45679999998653  4788999999999999999999998543211110000000000        00000        


Q ss_pred             -------hhccc----cchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 043099           90 -------EVVDT----NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIRE  143 (153)
Q Consensus        90 -------~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~  143 (153)
                             .....    .........+........+.+++.+||+.+|++|||+.|++++  +..+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence                   00000    0000000111223456678999999999999999999999877  444443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.8e-16  Score=108.00  Aligned_cols=65  Identities=25%  Similarity=0.404  Sum_probs=50.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .+||+|||++..+.... ........|++.|+|||++..     ..++.++||||+||+++++++|..||.
T Consensus       140 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~  209 (331)
T cd05597         140 HIRLADFGSCLRLLADG-TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             CEEEEECCceeecCCCC-CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence            47999999997764322 112223468999999998763     357789999999999999999999985

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.63  E-value=1.5e-16  Score=104.64  Aligned_cols=115  Identities=23%  Similarity=0.237  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++|+|||.+.......   ......|+..|++||.+....++.++|+||+|++++++++|..|+......   ......
T Consensus       138 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~  211 (258)
T cd05578         138 HVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIR  211 (258)
T ss_pred             CEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHH
Confidence            47899999988764332   122345778899999988878899999999999999999999997542221   111110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH--HHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM--TDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~evl~  136 (153)
                              .......      ...+...+..+.+++.+||+.+|.+||++  .|+++
T Consensus       212 --------~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         212 --------AKQETAD------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             --------HHhcccc------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence                    0000000      01112234678899999999999999999  66553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.63  E-value=2e-16  Score=105.11  Aligned_cols=116  Identities=16%  Similarity=0.263  Sum_probs=78.6

Q ss_pred             ceEecccccceeccCCCC------------------CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcC
Q 043099            2 VAHVSDFGISKLLGEGDG------------------SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK   63 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~------------------~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~   63 (153)
                      .++|+|||++........                  ........++..|++||......++.++|+||+|++++++++|.
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~  219 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK  219 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            478999999987643221                  01223345788899999988777889999999999999999999


Q ss_pred             CCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH----HHHHHH
Q 043099           64 KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM----TDAAAK  137 (153)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~----~evl~~  137 (153)
                      .|+.....    ...         ........       ...+......+.+++.+||+.+|.+||++    .+++++
T Consensus       220 ~p~~~~~~----~~~---------~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         220 PPFRGSNE----YLT---------FQKILKLE-------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             CCCCCccH----HHH---------HHHHHhcC-------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            99753210    000         00000000       00111224567889999999999999999    777754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.63  E-value=6.5e-17  Score=112.14  Aligned_cols=62  Identities=26%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      ++||||||.|.....+.    .+.+.-+..|.|||++.+.+|++..|+||.||.+||+++|+..|+
T Consensus       575 iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp  636 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP  636 (752)
T ss_pred             eeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence            58999999998876543    333445678999999999999999999999999999999997664

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.6e-16  Score=110.04  Aligned_cols=114  Identities=21%  Similarity=0.303  Sum_probs=79.0

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSE   82 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~   82 (153)
                      +||.|||+|+.+..+.   ..-.++||+.|.|||++.+..++.++|.|++|++++|+++|.+||.....  ......+-+
T Consensus       559 ~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp--mktYn~ILk  633 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP--MKTYNLILK  633 (732)
T ss_pred             eEEeehhhHHHhccCC---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHh
Confidence            7999999999987554   23347899999999999999999999999999999999999999853211  111111111


Q ss_pred             hccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           83 SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                      +    +..            ...|........+++.+.+..+|.+|.-     +.++.++
T Consensus       634 G----id~------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  634 G----IDK------------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             h----hhh------------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence            1    111            1112233445667788888889998865     5555554

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.63  E-value=1.5e-16  Score=103.35  Aligned_cols=62  Identities=24%  Similarity=0.333  Sum_probs=54.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||.|+...+.     .-..+|||-|+|||++....|..++|=|+||++++||+.|.+||..
T Consensus       182 ~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~  243 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD  243 (355)
T ss_pred             cEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence            3799999999987532     2235899999999999999999999999999999999999999853

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.62  E-value=1.4e-16  Score=108.46  Aligned_cols=120  Identities=16%  Similarity=0.183  Sum_probs=73.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++...... ........|++.|+|||++.+     ..++.++|+||||++++++++|..||.....     
T Consensus       140 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----  213 (331)
T cd05624         140 HIRLADFGSCLKMNQDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----  213 (331)
T ss_pred             CEEEEeccceeeccCCC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----
Confidence            47999999998764332 112233568999999998765     3578899999999999999999999853111     


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQ--RICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  137 (153)
                      ...        ...+.........+  .........+.+++.+|+..++.+  |+++++++++
T Consensus       214 ~~~--------~~~i~~~~~~~~~p--~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         214 VET--------YGKIMNHEERFQFP--SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHH--------HHHHHcCCCcccCC--CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            000        00111000000000  000122345677888888765543  4688888876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.4e-16  Score=109.10  Aligned_cols=122  Identities=25%  Similarity=0.317  Sum_probs=83.9

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCC----CccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNG----IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~----~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      .+||+|||+++.+..+...     ...+...||.+|++||.+.-.    +++.++||||.|++++..+.|+.||......
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            4799999999998754322     233456799999999975432    4889999999999999999999998653322


Q ss_pred             ccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           73 KTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...+..    .          ..+....-.++..+....+...++++||++.-++|....|+...
T Consensus       691 QdILqe----N----------TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  691 QDILQE----N----------TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             HHHHhh----h----------chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            221110    0          00111112233333445567889999999999999998887654

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=5.3e-16  Score=102.47  Aligned_cols=117  Identities=17%  Similarity=0.065  Sum_probs=77.0

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||+++....... ........++..|++||.+.+..++.++|+||||++++++++|..||.....    .....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~  219 (264)
T cd06653         144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIF  219 (264)
T ss_pred             CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHH
Confidence            478999999986532110 0111234578899999999887888999999999999999999999753110    00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ........     ...+......+.+++.+||. ++..||++.+++.+
T Consensus       220 ---------~~~~~~~~-----~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         220 ---------KIATQPTK-----PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             ---------HHHcCCCC-----CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence                     00000000     01122344568889999999 57999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.62  E-value=3.6e-16  Score=102.33  Aligned_cols=113  Identities=21%  Similarity=0.199  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +++|+|||++.......  .......++..|++||...+...+.++|+||||++++++++|..|+.....     ...  
T Consensus       131 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~--  201 (250)
T cd05123         131 HIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEI--  201 (250)
T ss_pred             cEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH--
Confidence            47899999998764321  122334578889999998887788999999999999999999999753211     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH---HHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM---TDAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~---~evl~  136 (153)
                            ........       ...+......+.+++.+||..+|++||++   .++++
T Consensus       202 ------~~~~~~~~-------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         202 ------YEKILKDP-------LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             ------HHHHhcCC-------CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence                  01111100       01111224567889999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.61  E-value=6e-16  Score=103.51  Aligned_cols=119  Identities=22%  Similarity=0.245  Sum_probs=76.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++...... ........|+..|++||.+.+.  .++.++||||||++++++++|..|+..... .......
T Consensus       143 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~  220 (290)
T cd05613         143 HVVLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEI  220 (290)
T ss_pred             CEEEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHH
Confidence            57999999998764322 1122234578899999988653  467889999999999999999999742111 0111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                      ...        ...    .. .  +.+......+.+++.+||+.+|++||     ++.+++.+
T Consensus       221 ~~~--------~~~----~~-~--~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         221 SRR--------ILK----SE-P--PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHH--------hhc----cC-C--CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            000        000    00 0  01122334677899999999999997     77888775

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.61  E-value=3.4e-16  Score=109.76  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=85.3

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      +.+||+|||++..+....   .....+|++.|.|||+..+..|. +.+|+||+|++++.++.|..||+..          
T Consensus       192 mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~----------  258 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ----------  258 (596)
T ss_pred             cceeeeccccceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc----------
Confidence            468999999999886332   45567899999999999988654 7899999999999999999998531          


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                         ..+....+++..+++-       +--...++-+++.++|..+|.+|++.+++...
T Consensus       259 ---~lk~Lr~rvl~gk~rI-------p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  259 ---NLKELRPRVLRGKYRI-------PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             ---ccccccchheeeeecc-------cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence               1122233333333322       12234467788999999999999999998876

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.60  E-value=5.8e-16  Score=100.89  Aligned_cols=101  Identities=18%  Similarity=0.148  Sum_probs=68.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .++++|||.+......     .....++..|++||......++.++|+||+|++++++++|..|+......         
T Consensus       123 ~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------  188 (237)
T cd05576         123 HIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------  188 (237)
T ss_pred             CEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------
Confidence            3789999987665322     11224566799999988778889999999999999999998775321100         


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM  131 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  131 (153)
                            ......         ...+......+.+++.+|++.||++||++
T Consensus       189 ------~~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         189 ------INTHTT---------LNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             ------cccccc---------cCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence                  000000         00111233467889999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.59  E-value=6.2e-16  Score=105.85  Aligned_cols=130  Identities=19%  Similarity=0.170  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++......     .....+++.|++||.+.+ ..++.++|+||+|++++++++|..||...... .......
T Consensus       156 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~  229 (343)
T cd07880         156 ELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIM  229 (343)
T ss_pred             CEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            4799999999865322     122356888999998765 35788999999999999999999997532210 1111111


Q ss_pred             hhhc--cchhhhhcccc----chhhhhc-----c-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL--PDRLTEVVDTN----LVREEQN-----F-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~--~~~~~~~~~~~----~~~~~~~-----~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....  +......+...    .....+.     + .........+.+++.+|++.+|++|||+.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         230 KVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             HhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1000  00000000000    0000000     0 0001233457899999999999999999999965

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=2.3e-15  Score=103.08  Aligned_cols=142  Identities=17%  Similarity=0.200  Sum_probs=85.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-Ccc-----ccccchhhhHHHHHHHhcCCCCCc--cCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVS-----IKCDVYSYGVLLMEAFTKKKPTNE--MFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~-----~~~dv~s~g~~~~~~~~g~~p~~~--~~~~~   73 (153)
                      ++-|+|||+|..+............+||..|||||++-+. .+.     .+.||||+|.|+||++++-.-...  ...-.
T Consensus       354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq  433 (534)
T KOG3653|consen  354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ  433 (534)
T ss_pred             cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccc
Confidence            5679999999988755444444457999999999998764 222     358999999999999986432211  00000


Q ss_pred             cchHHhhhhhc-cchhh-hhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           74 TNLRNWVSESL-PDRLT-EVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        74 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ..+..-+.... -+..+ .++.++.++.-+..=.....+..+.+.+..||..||+.|.|+.=|.+.+.++..
T Consensus       434 lpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  434 LPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             CchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            11111111111 11112 122222222211110112445677889999999999999999888887777654

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.9e-15  Score=102.86  Aligned_cols=132  Identities=19%  Similarity=0.312  Sum_probs=87.9

Q ss_pred             eEecccccceeccCCCC--CcccccccccccccCcCccCCC----Ccc--ccccchhhhHHHHHHHhcC----------C
Q 043099            3 AHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNG----IVS--IKCDVYSYGVLLMEAFTKK----------K   64 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~----~~~--~~~dv~s~g~~~~~~~~g~----------~   64 (153)
                      +-|+|+|+|........  ....+..+||..|||||++...    .|.  ..+||||||.|+||+..+-          .
T Consensus       355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~  434 (513)
T KOG2052|consen  355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL  434 (513)
T ss_pred             EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence            45899999987764322  2344567999999999988653    122  3589999999999988632          2


Q ss_pred             CCCccCCCccchHHhhhhhccchhhhhc-cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           65 PTNEMFTGKTNLRNWVSESLPDRLTEVV-DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        65 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ||-..-..+...         +...+++ ..++++..+.-=...+....+.++|..||..+|..|.|+-.+.+.|.++.+
T Consensus       435 Pyyd~Vp~DPs~---------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  435 PYYDVVPSDPSF---------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CcccCCCCCCCH---------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            433222222211         1122222 233333322222235677889999999999999999999999999998875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.57  E-value=3.2e-15  Score=98.04  Aligned_cols=132  Identities=17%  Similarity=0.125  Sum_probs=83.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCC--Cccch---
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT--GKTNL---   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~--~~~~~---   76 (153)
                      ++||.|||+++.-..   ....+..+.+..|.|||++.+..++..+||||.||++.||+.|..-|.....  +....   
T Consensus       156 ~lKi~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~  232 (369)
T KOG0665|consen  156 TLKILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ  232 (369)
T ss_pred             heeeccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence            579999999986432   2356777889999999999998999999999999999999999876532110  00001   


Q ss_pred             -----HHhhhhhccchhhhhccccc----hhhhhcc---------hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 -----RNWVSESLPDRLTEVVDTNL----VREEQNF---------SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 -----~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                           ..+..... .....++...-    ......+         ...........+++.+||-.+|++|.|+.++|.+
T Consensus       233 lgtpd~~F~~qL~-~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  233 LGTPDPSFMKQLQ-PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             hcCCCHHHHHHhh-HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                 11111100 00011110000    0000000         0112334567789999999999999999999976

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=5.7e-15  Score=100.46  Aligned_cols=65  Identities=26%  Similarity=0.349  Sum_probs=55.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|||+++.-.-+  ..+....+|||-|+|||++..++|+..+|-||||++++||+.|+.||+.
T Consensus       488 HiKi~DFGmcKEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  488 HIKIADFGMCKENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             ceEeeecccccccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            5799999999853211  2244567999999999999999999999999999999999999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.54  E-value=4e-15  Score=92.57  Aligned_cols=80  Identities=31%  Similarity=0.360  Sum_probs=59.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC----CCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      ++|++|||.|..+....   ..+...|...|+|||.+..    ..|+-++||||+|+++.|+.+++.|+.........+.
T Consensus       187 qVKiCDFGIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLk  263 (282)
T KOG0984|consen  187 QVKICDFGISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLK  263 (282)
T ss_pred             cEEEcccccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHH
Confidence            58999999999875433   2333457778999998653    3689999999999999999999999876555444444


Q ss_pred             Hhhhhhc
Q 043099           78 NWVSESL   84 (153)
Q Consensus        78 ~~~~~~~   84 (153)
                      ..+.+..
T Consensus       264 qvVeep~  270 (282)
T KOG0984|consen  264 QVVEEPS  270 (282)
T ss_pred             HHhcCCC
Confidence            4444333

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=5.1e-15  Score=97.92  Aligned_cols=114  Identities=18%  Similarity=0.176  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++--...  -.+...++|||.|.|||++-...|+.++|-|.+|+|++||..|+.||......         
T Consensus       306 HIKitDFGLCKE~I~~--g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---------  374 (516)
T KOG0690|consen  306 HIKITDFGLCKEEIKY--GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---------  374 (516)
T ss_pred             ceEeeecccchhcccc--cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---------
Confidence            5799999999864322  23456689999999999999989999999999999999999999998542221         


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                           .+...+-    -..  ...|....++...++...|..||++|.     .+.||.++
T Consensus       375 -----kLFeLIl----~ed--~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  375 -----KLFELIL----MED--LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             -----HHHHHHH----hhh--ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence                 1111110    000  111222334555677778888999994     25666554

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.51  E-value=2e-14  Score=102.69  Aligned_cols=137  Identities=16%  Similarity=0.120  Sum_probs=87.8

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccC-CCCccccccchhhhHHHHHHHhcCCCCCccCCCcc----chH
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT----NLR   77 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~----~~~   77 (153)
                      =||+|||.|+.+.++.   .....+||..|.+||... ...|+..+|.|||||++|+.++|..||........    .+.
T Consensus       163 yKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~  239 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH  239 (732)
T ss_pred             EeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence            3899999999886554   567789999999999988 46899999999999999999999999865443221    111


Q ss_pred             Hhhhhhccchhhhhccccch-h--hhhcchhh----HHHHHHHHHHHhhccccCCCCCC--CHHHHHHHHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLV-R--EEQNFSAK----LDCLLSIMYLALDCCMESPEQRI--CMTDAAAKLKKIREK  144 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~----~~~~~~~~~l~~~cl~~~p~~Rp--s~~evl~~l~~~~~~  144 (153)
                      ....+..  .....+..... +  ....++.+    .-....+-+++-.++..++.+|-  ...+....+..|.+.
T Consensus       240 ~~tkkp~--~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~  313 (732)
T KOG4250|consen  240 IITKKPS--GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL  313 (732)
T ss_pred             hhccCCC--ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence            1111111  11111111000 0  01111111    23334455677777788999998  777777777766654

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.49  E-value=1.5e-14  Score=97.77  Aligned_cols=96  Identities=18%  Similarity=0.266  Sum_probs=73.0

Q ss_pred             ccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcc
Q 043099           24 TMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNF  103 (153)
Q Consensus        24 ~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (153)
                      ..++||-.|.|||++.+..++.++|=|+|||++|||+.|..||.....             .+.+..++....     .+
T Consensus       293 nSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-------------~~Tl~NIv~~~l-----~F  354 (459)
T KOG0610|consen  293 NSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-------------KETLRNIVGQPL-----KF  354 (459)
T ss_pred             cccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-------------hhhHHHHhcCCC-----cC
Confidence            457899999999999999999999999999999999999999853211             122333333322     22


Q ss_pred             hhhHHHHHHHHHHHhhccccCCCCCCC----HHHHHHH
Q 043099          104 SAKLDCLLSIMYLALDCCMESPEQRIC----MTDAAAK  137 (153)
Q Consensus       104 ~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~evl~~  137 (153)
                      +........+.+|+.+.|..||++|.-    ++||.++
T Consensus       355 p~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  355 PEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             CCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence            222345567889999999999999988    7777665

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.49  E-value=5.3e-14  Score=98.53  Aligned_cols=133  Identities=20%  Similarity=0.303  Sum_probs=86.9

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCC-------ccccccchhhhHHHHHHHhcCCCCCccCCCc
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-------VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK   73 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-------~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~   73 (153)
                      |++||+|||+.................-...|.+||.+.+..       .+.+.||||||++++|++.++.||.......
T Consensus        86 w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~  165 (484)
T KOG1023|consen   86 WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE  165 (484)
T ss_pred             EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC
Confidence            579999999998764311111122222355799999887631       3566999999999999999999987644333


Q ss_pred             cc--hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           74 TN--LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        74 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..  +...+.+    .......+.+.       ...+....+..++.+||..+|..||+++++-..++.+...
T Consensus       166 ~~~eii~~~~~----~~~~~~rP~i~-------~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  166 DPDEIILRVKK----GGSNPFRPSIE-------LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ChHHHHHHHHh----cCCCCcCcchh-------hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            22  2222111    11111112111       1123444788999999999999999999999988877664

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.49  E-value=3.8e-14  Score=89.68  Aligned_cols=140  Identities=14%  Similarity=0.183  Sum_probs=88.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh-
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW-   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~-   79 (153)
                      .++|+|+|+|.+...+....   ..+.+..|.-||.+... -|+...|+|||||++.+|+..+.||..-......+... 
T Consensus       171 kLrlIDWGLAEFYHp~~eYn---VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIa  247 (338)
T KOG0668|consen  171 KLRLIDWGLAEFYHPGKEYN---VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIA  247 (338)
T ss_pred             eeeeeecchHhhcCCCceee---eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHH
Confidence            46899999999987655433   23677889999988875 58999999999999999999999986433322222222 


Q ss_pred             -----------hhhhcc---chhhhhccccchhhhhcchhh---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHH
Q 043099           80 -----------VSESLP---DRLTEVVDTNLVREEQNFSAK---LDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKK  140 (153)
Q Consensus        80 -----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~  140 (153)
                                 ..+..-   .....++....+..-..+-..   ....++.++++.+.|.+|..+|+|+.|.+.+  ...
T Consensus       248 kVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  248 KVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             HHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence                       221111   111111111111110011101   1223678899999999999999999999877  444


Q ss_pred             HHHH
Q 043099          141 IREK  144 (153)
Q Consensus       141 ~~~~  144 (153)
                      +++.
T Consensus       328 ~~~~  331 (338)
T KOG0668|consen  328 VREA  331 (338)
T ss_pred             HHHH
Confidence            4444

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=2.6e-14  Score=103.48  Aligned_cols=125  Identities=13%  Similarity=0.118  Sum_probs=85.7

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCCCCcccc-ccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNGIVSIK-CDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~-~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||.+..+.-+-..  ......+|+..|+|||++.+..|++. .||||.|+++..|+.|+.|+......+.... 
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-  536 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-  536 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-
Confidence            5899999999987643322  34456789999999999999888855 8999999999999999998754333222210 


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                       .  .........       ...........+.....++.++|+.+|.+|.|+.++++.
T Consensus       537 -~--~~~~~~~~~-------~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  537 -T--NNYSDQRNI-------FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             -h--hcccccccc-------ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence             0  000000000       000111124456677889999999999999999999874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.43  E-value=2.6e-13  Score=96.55  Aligned_cols=128  Identities=20%  Similarity=0.180  Sum_probs=72.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC--------------------c--cccccchhhhHHHHHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI--------------------V--SIKCDVYSYGVLLMEA   59 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~--------------------~--~~~~dv~s~g~~~~~~   59 (153)
                      .+||+|||+++...... ........+++.|++||.+....                    +  ..+.|+||+||++++|
T Consensus       347 ~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em  425 (507)
T PLN03224        347 QVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM  425 (507)
T ss_pred             cEEEEeCcCccccccCC-ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence            57999999997654322 11122234578999999765321                    1  1247999999999999


Q ss_pred             HhcCC-CCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCC---CCCCCHHHHH
Q 043099           60 FTKKK-PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESP---EQRICMTDAA  135 (153)
Q Consensus        60 ~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~Rps~~evl  135 (153)
                      +++.. |+.....-......+ ... ...+...     ......++..+.......+++.++|..+|   .+|+|++|++
T Consensus       426 ~~~~l~p~~~~~~f~~~~~~~-~~~-~~~~r~~-----~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL  498 (507)
T PLN03224        426 CVPELRPVANIRLFNTELRQY-DND-LNRWRMY-----KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL  498 (507)
T ss_pred             HhCCCCCccchhhhhhHHhhc-cch-HHHHHhh-----cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence            99864 543211100000000 000 0000000     00111122223345667888999998765   6899999999


Q ss_pred             HH
Q 043099          136 AK  137 (153)
Q Consensus       136 ~~  137 (153)
                      .|
T Consensus       499 ~H  500 (507)
T PLN03224        499 SH  500 (507)
T ss_pred             CC
Confidence            76

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.42  E-value=2.7e-13  Score=83.02  Aligned_cols=62  Identities=21%  Similarity=0.344  Sum_probs=49.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-ccccccchhhhHHHHHHHhcCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEAFTKKKP   65 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~g~~p   65 (153)
                      ++||+|||+++.++-+..-  -+..+-|.+|.+|.++.+.+ |+...|.||.||++.|+...-.|
T Consensus       139 elkladfglarafgipvrc--ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp  201 (292)
T KOG0662|consen  139 ELKLADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_pred             cEEecccchhhhcCCceEe--eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence            5799999999998755421  13346689999999998874 88999999999999999964444

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.40  E-value=9.3e-15  Score=102.08  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.+.+.+   -....+||+.|.|||++....|....|.||.|+++|-.+.|..||..    +..+.+.+.
T Consensus       705 QvKlCDFGfARiIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE----dEdIndQIQ  777 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE----DEDINDQIQ  777 (888)
T ss_pred             ceeeccccceeecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC----ccchhHHhh
Confidence            57999999999986543   24456899999999999999999999999999999999999999743    111111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +      ..+-++        .....+.....++++.+.|+..-.+|-|.++.+.+
T Consensus       778 N------AaFMyP--------p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh  819 (888)
T KOG4236|consen  778 N------AAFMYP--------PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH  819 (888)
T ss_pred             c------cccccC--------CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence            0      000010        11124555667788888888888888888776654

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=2.6e-13  Score=90.47  Aligned_cols=65  Identities=23%  Similarity=0.315  Sum_probs=55.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|+|+++.-..+  -.+.+.++|||.|.|||++.+..|...+|-|++|++++||..|+.||.-
T Consensus       389 hikltdygmcke~l~~--gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGLGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             ceeecccchhhcCCCC--CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence            4799999999864332  2245678999999999999999999999999999999999999999853

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.35  E-value=4.5e-13  Score=88.55  Aligned_cols=131  Identities=15%  Similarity=0.204  Sum_probs=80.6

Q ss_pred             eEecccccceeccC--CCC---CcccccccccccccCcCccC---C--CCccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            3 AHVSDFGISKLLGE--GDG---SMTQTMTMATIGYMAPEYGS---N--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         3 ~kl~DfG~a~~~~~--~~~---~~~~~~~~g~~~~~~pe~~~---~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      +||+||-+..-...  +..   +-.....+|+..|||||++.   +  ..|+.++|.||+|+++|-|+.|..||....+.
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~  297 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA  297 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence            69999988664421  111   11123457888999999643   3  24889999999999999999999999654432


Q ss_pred             ccchHHh-hhhhccchhhhhccccchhhhhcch--hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           73 KTNLRNW-VSESLPDRLTEVVDTNLVREEQNFS--AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +=.+..- .....++.+.    ..+-+....++  .+.....+..+++.+.+..++.+|.++.+++++
T Consensus       298 dCGWdrGe~Cr~CQ~~LF----esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  298 DCGWDRGEVCRVCQNKLF----ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             cCCccCCCccHHHHHHHH----HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence            2111100 0000011111    11111122222  124455667788888889999999999999984

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.31  E-value=7.7e-13  Score=99.04  Aligned_cols=65  Identities=23%  Similarity=0.447  Sum_probs=54.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      ++||+|||.+-.+..+. .-.....+|||-|++||++..     ..|+.-+|-||+||++|||+.|..||-
T Consensus       213 HikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY  282 (1317)
T KOG0612|consen  213 HIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY  282 (1317)
T ss_pred             cEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence            57999999998876443 344556789999999998753     348899999999999999999999984

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.31  E-value=7.6e-13  Score=92.02  Aligned_cols=60  Identities=27%  Similarity=0.458  Sum_probs=49.9

Q ss_pred             ceEecccccceeccCCC----CCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh
Q 043099            2 VAHVSDFGISKLLGEGD----GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT   61 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~----~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~   61 (153)
                      ++||.|||+........    ....++...||..|++||-+.+..|+.++|||++|++++|++.
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            47899999988765433    1234556789999999999999999999999999999999986

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.30  E-value=5e-12  Score=80.18  Aligned_cols=84  Identities=31%  Similarity=0.407  Sum_probs=66.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .++|+|||.+........  ......+...|.+||..... .++.+.|+|++|++++++                     
T Consensus       131 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             cEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            478999999987643321  12234567789999988776 778899999999999998                     


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                                                    ..+.+++..|++.+|++||++.+++..+
T Consensus       188 ------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                          3577889999999999999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.25  E-value=2.8e-12  Score=91.71  Aligned_cols=118  Identities=17%  Similarity=0.244  Sum_probs=79.5

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      +|++|||.+..+...  ......++||++|+|||+..   ...|...+|||+.|+.-.|+...+.|......    .+..
T Consensus       151 vklaDfgvsaqitat--i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----mr~l  224 (829)
T KOG0576|consen  151 VKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----MRAL  224 (829)
T ss_pred             eeecccCchhhhhhh--hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----HHHH
Confidence            699999999876533  23456789999999999753   33689999999999999999888877432110    0000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .+-.+....++....+.....-+.+++..|+-.+|++||+++.++++
T Consensus       225 -----------~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  225 -----------FLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             -----------HHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence                       00000011111122224455667888999999999999999998874

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.25  E-value=2.9e-12  Score=83.29  Aligned_cols=98  Identities=18%  Similarity=0.167  Sum_probs=67.3

Q ss_pred             cccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcc
Q 043099           27 MATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNF  103 (153)
Q Consensus        27 ~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (153)
                      .-++.|++||.+...+   .-.++|.|||.+++||+.++..||.....-                  ....++.-+..+.
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm------------------ecgmkialeglrv  408 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM------------------ECGMKIALEGLRV  408 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch------------------hhhhhhhhccccc
Confidence            3467899999887654   235699999999999999999998542110                  0111111111111


Q ss_pred             hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099          104 SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus       104 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ..|+-....+.++|.-|++.||.+||.+..++-.|++++
T Consensus       409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            122223345677888899999999999999999999874

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.99  E-value=2.1e-10  Score=82.39  Aligned_cols=43  Identities=30%  Similarity=0.421  Sum_probs=40.2

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+.|+|||++....|+..+|-||.|++++||+.|+.||..
T Consensus       831 lvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~  873 (1034)
T KOG0608|consen  831 LVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLA  873 (1034)
T ss_pred             hcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccC
Confidence            5799999999999988999999999999999999999999854

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.99  E-value=2.2e-10  Score=74.53  Aligned_cols=126  Identities=17%  Similarity=0.205  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CC--CccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||.++..+.....     ..-+-.|.+||...   ..  ...+..|||.||++++..++|..|++.........
T Consensus       161 rvKlcDFG~t~k~g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y  235 (378)
T KOG1345|consen  161 RVKLCDFGLTRKVGTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY  235 (378)
T ss_pred             EEEeeecccccccCceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence            5899999999875432211     11233578887432   22  25578999999999999999999987543333222


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..|..         .........+..+   ......+..+..+-+..++++|-...++.+.-...+.+
T Consensus       236 ~~~~~---------w~~rk~~~~P~~F---~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  236 WEWEQ---------WLKRKNPALPKKF---NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             HHHHH---------HhcccCccCchhh---cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            22221         1111111111111   11223455677788899999997777777766655554

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.95  E-value=3.4e-10  Score=77.04  Aligned_cols=112  Identities=20%  Similarity=0.263  Sum_probs=69.2

Q ss_pred             ccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh--------hhc--cch---hh--
Q 043099           26 TMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS--------ESL--PDR---LT--   89 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--------~~~--~~~---~~--   89 (153)
                      ..||++|.|||++..- .-+++.||||.|++++.++++..||......-..+...+.        +..  +..   +.  
T Consensus       237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks  316 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKS  316 (418)
T ss_pred             cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence            5699999999987653 5678899999999999999999998764443322222110        000  000   00  


Q ss_pred             ------h-h-----cc-ccchh-hh---hcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           90 ------E-V-----VD-TNLVR-EE---QNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        90 ------~-~-----~~-~~~~~-~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            + .     ++ ..+.. ..   ......+..+..+++++.+|++.+|.+|.|+++.|++
T Consensus       317 n~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  317 NIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             cccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence                  0 0     00 00000 00   0000012223478899999999999999999999986

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.89  E-value=2.3e-09  Score=68.95  Aligned_cols=65  Identities=23%  Similarity=0.359  Sum_probs=50.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCcc-CCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYG-SNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~-~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      .++|+|||.+......... ......++..|++||.. ....++.++|+|+||++++++++|+.||.
T Consensus       136 ~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      136 LVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            5789999999876543200 12234567789999988 55578889999999999999999999984

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.75  E-value=2e-09  Score=76.56  Aligned_cols=60  Identities=25%  Similarity=0.393  Sum_probs=49.7

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCC
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPT   66 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~   66 (153)
                      +||+|||.|.....+    .-..++||..|.|||++.+.+|. ...|||++|+++|.++....|+
T Consensus       709 ~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             EEEeeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence            699999999775332    34557899999999999998766 5599999999999998887776

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.67  E-value=1.4e-08  Score=77.11  Aligned_cols=89  Identities=21%  Similarity=0.322  Sum_probs=56.2

Q ss_pred             ccccCcCccCCCC-----------ccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhhhhhccchhhhhccccch
Q 043099           30 IGYMAPEYGSNGI-----------VSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLV   97 (153)
Q Consensus        30 ~~~~~pe~~~~~~-----------~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (153)
                      .+|.|||.+....           .+++.||||.||++.|++. |+++|..     ..+-.|.+.. .......+ ..+.
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----SQL~aYr~~~-~~~~e~~L-e~Ie  263 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----SQLLAYRSGN-ADDPEQLL-EKIE  263 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----HHHHhHhccC-ccCHHHHH-HhCc
Confidence            3699999765421           5678999999999999996 6777642     1111111111 00000000 0000


Q ss_pred             hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           98 REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                  -..+.++++.|++.||.+|.|+++.|+.
T Consensus       264 ------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  264 ------------DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ------------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence                        0146778899999999999999999987

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.66  E-value=6.8e-09  Score=78.27  Aligned_cols=66  Identities=23%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             ceEecccccceeccCCC---------CCc----ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCC
Q 043099            2 VAHVSDFGISKLLGEGD---------GSM----TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTN   67 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~---------~~~----~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~   67 (153)
                      ++|++|||+++.....-         ...    .-...+||+.|+|||++.-+.|...+|=|++|+++++-+.|..||.
T Consensus       181 hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpff  259 (1205)
T KOG0606|consen  181 HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF  259 (1205)
T ss_pred             cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence            46899999998643211         011    1123479999999999998899999999999999999999999975

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.63  E-value=1.2e-08  Score=72.97  Aligned_cols=59  Identities=31%  Similarity=0.378  Sum_probs=48.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++|+.|||+++......      ..+|+..|++||++.  .+...+|-||||++++++++|..||..
T Consensus       135 hi~~tdfglske~v~~~------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKEK------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ccccCCchhhhHhHhhh------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            46889999998764322      118899999999998  567889999999999999999999853

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=8.5e-08  Score=65.97  Aligned_cols=118  Identities=21%  Similarity=0.147  Sum_probs=71.7

Q ss_pred             ceEecccccceeccCCC----CCcccccccccccccCcCccCCCC------ccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGD----GSMTQTMTMATIGYMAPEYGSNGI------VSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~----~~~~~~~~~g~~~~~~pe~~~~~~------~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      ++-|+|||++-.-....    .....-...|...-+|||+....+      .-.++|.|+.|.+-||++....||-...+
T Consensus       383 ~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe  462 (598)
T KOG4158|consen  383 QLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE  462 (598)
T ss_pred             EEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch
Confidence            35689999986532100    000111234667789999876432      22579999999999999999999743111


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                        ..++.....+.+-...+..++..+.+++...|+.||++|+|..-..+.
T Consensus       463 ------------------m~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANv  510 (598)
T KOG4158|consen  463 ------------------MLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANV  510 (598)
T ss_pred             ------------------heechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhH
Confidence                              011111111111122334566678889999999999999996544433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.60  E-value=2.5e-07  Score=62.35  Aligned_cols=127  Identities=21%  Similarity=0.253  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCc----ccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCC--
Q 043099            2 VAHVSDFGISKLLGEGDGSM----TQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG--   72 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~----~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~--   72 (153)
                      .++++|||.++.+.......    ......|+..|++||.+.+   .......|+|++|+++++++.|..|+......  
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~  219 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA  219 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence            37899999998665432211    2355679999999999887   46888999999999999999999885432211  


Q ss_pred             ccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           73 KTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..............    .........   ..  ......+.+++..++..+|..|.++.+....
T Consensus       220 ~~~~~~~~~~~~~~----~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         220 TSQTLKIILELPTP----SLASPLSPS---NP--ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHhcCCc----ccccccCcc---cc--chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            01111111111000    000000000   00  1122456778888899999999998877765

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.43  E-value=1.2e-07  Score=63.10  Aligned_cols=97  Identities=15%  Similarity=0.222  Sum_probs=55.7

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCC--------CCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN--------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      +.|+||+.....+..   ...  ...+..|.|||....        ..++.+.|.|++|+++|.+..+..|+........
T Consensus       184 v~Lg~F~~~~r~g~~---~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~  258 (288)
T PF14531_consen  184 VFLGDFSSLVRAGTR---YRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD  258 (288)
T ss_dssp             EEE--GGGEEETTEE---EEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST
T ss_pred             EEEcChHHHeecCce---eec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccc
Confidence            578888776654221   111  233567889986533        2477889999999999999999999864221111


Q ss_pred             chHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCC
Q 043099           75 NLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQR  128 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  128 (153)
                      ...                 ..      ..+. +.+..+..++.++|+.+|.+|
T Consensus       259 ~~~-----------------~f------~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  259 PEW-----------------DF------SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SGG-----------------GG------TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ccc-----------------cc------hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            000                 01      1123 556677889999999999987

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.42  E-value=8.7e-08  Score=70.20  Aligned_cols=121  Identities=17%  Similarity=0.169  Sum_probs=79.9

Q ss_pred             ceEecccccceeccC-CCCCcccccccc-cccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGE-GDGSMTQTMTMA-TIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~-~~~~~~~~~~~g-~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+|++|||+|..+.. ..........+| ++.|.+||...+. ......|+||.|+++..+++|..|.............
T Consensus       163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~  242 (601)
T KOG0590|consen  163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS  242 (601)
T ss_pred             cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee
Confidence            368899999998765 333444556678 9999999998884 5668899999999999999999986543333222111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      +.....               ...............++..+++..+|..|.+.+++...
T Consensus       243 ~~~~~~---------------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  243 WKSNKG---------------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             eccccc---------------ccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence            111110               00001112233445667788888999999998877543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.06  E-value=3.8e-05  Score=52.61  Aligned_cols=129  Identities=12%  Similarity=0.015  Sum_probs=78.1

Q ss_pred             ceEecccccce--eccCCCCC----cc--cccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc
Q 043099            2 VAHVSDFGISK--LLGEGDGS----MT--QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~--~~~~~~~~----~~--~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~   73 (153)
                      .+.|.|||+++  .+......    ..  .....||..|.++....+...+.+.|+||++-++.++..|..|+.......
T Consensus       165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~  244 (322)
T KOG1164|consen  165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD  244 (322)
T ss_pred             eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc
Confidence            46889999999  33222111    01  123459999999999988889999999999999999999998874322111


Q ss_pred             cchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           74 TNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      . .........     ......         .....+..+.+++..+-+.+-.++|.-..+...|.......
T Consensus       245 ~-~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  245 L-KSKFEKDPR-----KLLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             h-HHHHHHHhh-----hhcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence            1 111100000     000000         00112223444444444578899999999999887776653

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.49  E-value=0.00061  Score=52.71  Aligned_cols=63  Identities=13%  Similarity=-0.041  Sum_probs=49.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK   64 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~   64 (153)
                      .++|+|||.|.-+.--....+-....+|-.+-++|+..+..|++..|.|.++.++.-|+.|+.
T Consensus       839 ~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  839 GLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            478999999975542111223344567888999999999999999999999999999998863

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.46  E-value=2.7e-05  Score=57.15  Aligned_cols=118  Identities=14%  Similarity=0.080  Sum_probs=67.3

Q ss_pred             eEecccccceeccCCCC-----Ccc--cccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCcc
Q 043099            3 AHVSDFGISKLLGEGDG-----SMT--QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKT   74 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~-----~~~--~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~   74 (153)
                      .||+.|+.+....++.+     +..  .....-..-|.+||++.+...+.++|++|+|++++.+.. |+.-+.. .. ..
T Consensus       139 wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~-~~  216 (700)
T KOG2137|consen  139 WKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAA-NG-GL  216 (700)
T ss_pred             eeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhc-cC-Cc
Confidence            36777777665544221     111  111223456999999988788899999999999998884 4433211 11 00


Q ss_pred             chHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           75 NLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                      ..... .... ....            .+....+.+.++.+-+.+.+..++..||++.++..
T Consensus       217 ~~~~~-~~~~-~~~~------------~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  217 LSYSF-SRNL-LNAG------------AFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             chhhh-hhcc-cccc------------cccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            00000 0000 0000            01111344566777788888999999998776653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.39  E-value=0.00064  Score=46.45  Aligned_cols=67  Identities=21%  Similarity=0.226  Sum_probs=54.5

Q ss_pred             ceEecccccceeccCCCCCc-----ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSM-----TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+.++|||+|+.+..+....     .+....||..||+.-...+..-+.+-|.=++|-+++.-+.|..|++.
T Consensus       167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence            46789999999987665321     22346799999999888887778889999999999999999999854

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.21  E-value=0.00025  Score=54.74  Aligned_cols=43  Identities=33%  Similarity=0.366  Sum_probs=39.6

Q ss_pred             ccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099           26 TMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus        26 ~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ..|++.|.+||.+.+......+|.|+.|+++++.++|..||..
T Consensus       995 ~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen  995 VVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred             ccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence            4689999999999999999999999999999999999999754

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.11  E-value=0.006  Score=43.41  Aligned_cols=140  Identities=14%  Similarity=0.094  Sum_probs=74.0

Q ss_pred             EecccccceeccCCCCCc-----ccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhc-CCCCCccCCC
Q 043099            4 HVSDFGISKLLGEGDGSM-----TQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTK-KKPTNEMFTG   72 (153)
Q Consensus         4 kl~DfG~a~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g-~~p~~~~~~~   72 (153)
                      .++|-|..+....++...     ...+.+|...|.+||.-.     +...+...|.|.+|+++++++.| ..||......
T Consensus       149 lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~  228 (637)
T COG4248         149 LVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI  228 (637)
T ss_pred             eeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccccc
Confidence            345555555554433211     223457888999999543     33456778999999999999976 7887543221


Q ss_pred             ---ccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccC--CCCCCCHHHHHHHHHHHHHHh
Q 043099           73 ---KTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES--PEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        73 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~--p~~Rps~~evl~~l~~~~~~~  145 (153)
                         .......+..+.-..-.+ ......+.+...+ ..-.+..+-.+..+|+...  +.-|||++.=+..|..+..++
T Consensus       229 ~~ap~p~E~~Ia~g~f~ya~~-~~~g~~p~P~~~P-~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         229 SDAPNPLETDIAHGRFAYASD-QRRGLKPPPRSIP-LSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             CCCCCcchhhhhcceeeechh-ccCCCCCCCCCCC-hhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence               111111111000000000 0000011100000 0122344455566676443  568999999999999888775

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.81  E-value=0.0022  Score=46.47  Aligned_cols=64  Identities=19%  Similarity=0.340  Sum_probs=47.0

Q ss_pred             ceEecccccceeccCCCC--C-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCC
Q 043099            2 VAHVSDFGISKLLGEGDG--S-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPT   66 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~   66 (153)
                      ..+++|||+...+.....  . ...-...|...|++||...+ .++...||+++|.++.+...+..+.
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccc
Confidence            357899999888765431  1 11112246678999999977 6788999999999999999887653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.49  E-value=0.003  Score=43.29  Aligned_cols=88  Identities=16%  Similarity=0.151  Sum_probs=50.9

Q ss_pred             ccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhH
Q 043099           28 ATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL  107 (153)
Q Consensus        28 g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (153)
                      +-++|.+|+.=.-...+.++|||+||+...++..+..--.. ..+.-..        ...+...+....           
T Consensus       244 ~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tn-seS~~~~--------ee~ia~~i~~le-----------  303 (458)
T KOG1266|consen  244 SLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTN-SESKVEV--------EENIANVIIGLE-----------  303 (458)
T ss_pred             cCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCC-Ccceeeh--------hhhhhhheeecc-----------
Confidence            45678888765555567789999999888888765421000 0000000        000111110000           


Q ss_pred             HHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099          108 DCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus       108 ~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                        ...-..++.+|++..|..||+|.+++.+
T Consensus       304 --n~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  304 --NGLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             --CccccCcCcccccCCCCCCcchhhhhcC
Confidence              0012346788999999999999998866

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=94.76  E-value=0.022  Score=43.28  Aligned_cols=51  Identities=18%  Similarity=0.223  Sum_probs=34.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGV   54 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~   54 (153)
                      .+||+|||+++......  .......+++.|.+||..... .-...+++|++|+
T Consensus       142 ~vkL~DFGls~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         142 HIKLTDFGLSKVTLNRE--LNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             CEEEEeCCCCccccCCc--ccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            57999999998764322  123345788999999865443 2334577888884

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=94.47  E-value=0.038  Score=36.54  Aligned_cols=67  Identities=19%  Similarity=0.074  Sum_probs=47.6

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+-|+|||+|+.+.+....     .......||..|.+-....+-.-+.+-|.=|+|-++...-.|..|++.
T Consensus       152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg  223 (341)
T KOG1163|consen  152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG  223 (341)
T ss_pred             eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence            3568999999988653321     112345688888887665554455678999999998888889999764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=94.32  E-value=0.0057  Score=40.00  Aligned_cols=43  Identities=12%  Similarity=0.147  Sum_probs=26.1

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHH
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA   59 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~   59 (153)
                      ++|+|||..+.......   ..           .++....+..++|+|+||+++.-.
T Consensus       173 i~liDfg~~~~~~e~~a---~d-----------~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKA---KD-----------RIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             EEEEECCCcccccchhh---HH-----------HHHHHhHhcccccccceeEeehHH
Confidence            57889988766532210   00           022333566789999999986543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=94.31  E-value=0.03  Score=39.27  Aligned_cols=38  Identities=16%  Similarity=0.146  Sum_probs=25.1

Q ss_pred             ceEecccccceeccCCCCCcc------cccccccccccCcCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMT------QTMTMATIGYMAPEYGS   39 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~------~~~~~g~~~~~~pe~~~   39 (153)
                      .+||+|||+|+.+.....-..      .....+++.|.+||.+.
T Consensus       150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            479999999998754321111      12345777889999775

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=91.71  E-value=0.11  Score=38.43  Aligned_cols=23  Identities=26%  Similarity=0.501  Sum_probs=19.1

Q ss_pred             ccccccchhhhHHHHHHHhcCCC
Q 043099           43 VSIKCDVYSYGVLLMEAFTKKKP   65 (153)
Q Consensus        43 ~~~~~dv~s~g~~~~~~~~g~~p   65 (153)
                      .++++||||+|.++.++.-|..-
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l  130 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISL  130 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHH
Confidence            44699999999999999887643

>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins

Probab=88.69  E-value=2.1  Score=27.90  Aligned_cols=23  Identities=13%  Similarity=0.170  Sum_probs=18.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHhhhc
Q 043099          126 EQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus       126 ~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                      ..|++.+++.++|..+.+.....
T Consensus       137 ~~r~~~~elk~EL~~l~~~~~~~  159 (213)
T PF04301_consen  137 PPRRSFEELKEELAALYEFIKKN  159 (213)
T ss_pred             CcCCCHHHHHHHHHHHHHHHhcc
Confidence            46899999999999998765543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=88.55  E-value=0.27  Score=36.17  Aligned_cols=114  Identities=16%  Similarity=0.086  Sum_probs=60.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccc-cCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGY-MAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~-~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ..+++|||+...+.-......    .....| .++.......+..++|+++||..+.+.+++...-...           
T Consensus       405 ~~~~~~~~~~t~~~~~~~~~~----~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----------  469 (524)
T KOG0601|consen  405 FSKLGDFGCWTRLAFSSGVFH----HIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----------  469 (524)
T ss_pred             hhhccccccccccceeccccc----ccccccccchhhccccccccccccccccccccccccCcccCccc-----------
Confidence            346778887764321111111    122334 3555555667889999999999988888776431110           


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                           ..+..+... ....   .+  . ....+..+...++.+++..||++.++..+.+..+
T Consensus       470 -----~~~~~i~~~-~~p~---~~--~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  470 -----VQSLTIRSG-DTPN---LP--G-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             -----ccceeeecc-cccC---CC--c-hHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence                 000000000 0000   00  1 1133444555577889999999888877665543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=82.10  E-value=1  Score=34.44  Aligned_cols=61  Identities=18%  Similarity=0.134  Sum_probs=44.8

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCC
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPT   66 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~   66 (153)
                      .|..||+....+....   ......+++.+++||+.....+....|+|+.+.--.++..|..|.
T Consensus       370 ~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  370 VKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             cccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            3566777766554321   345567899999999998888999999999998666666666553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		6e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-10
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		8e-10
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-09
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-07
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-06
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		5e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		5e-06
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		8e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		9e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		9e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		9e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		9e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		9e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		9e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		1e-05
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		1e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		1e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-05
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		3e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		4e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		4e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		4e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		5e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		6e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-05
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		8e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		9e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		9e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		4e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		4e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		4e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		7e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		7e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		8e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		9e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		9e-04

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFGISK   E D +    +   T+GY+ PEY   G ++ K DVYS+GV+L E  
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61  TKKKPTNEMFTGK-TNLRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
             +    +    +  NL  W  ES  + +L ++VD NL  +      + + L      A+
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKFGDTAV 290
Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   S E R  M D   KL+
Sbjct: 291 KCLALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFGISK   E   +    +   T+GY+ PEY   G ++ K DVYS+GV+L E  
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61  TKKKPTNEMFTGK-TNLRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
             +    +    +  NL  W  ES  + +L ++VD NL  +      + + L      A+
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKFGDTAV 290
Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   S E R  M D   KL+
Sbjct: 291 KCLALSSEDRPSMGDVLWKLE 311

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
           A V DFG++KL+   D  +   +   TIG++APEY S G  S K DV+ YGV+L+E  T 
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 63  KKPTNEMFTGKTN---LRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
           ++  +       +   L +WV   L + +L  +VD +L   + N+  K + +  ++ +AL
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL---QGNY--KDEEVEQLIQVAL 294
Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   SP +R  M++    L+
Sbjct: 295 LCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
           A V DFG++KL+   D  +   +    IG++APEY S G  S K DV+ YGV+L+E  T 
Sbjct: 173 AVVGDFGLAKLMDYKDXHVXXAVR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 63  KKPTNEMFTGKTN---LRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
           ++  +       +   L +WV   L + +L  +VD +L   + N+  K + +  ++ +AL
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL---QGNY--KDEEVEQLIQVAL 286
Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   SP +R  M++    L+
Sbjct: 287 LCTQSSPMERPKMSEVVRMLE 307

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           ++  ++DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 142 LICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELV 200
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV++   V          DC +S+  L + C
Sbjct: 201 TKGRVP---YPGMNN-------------REVLEQ--VERGYRMPCPQDCPISLHELMIHC 242
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 243 WKKDPEER 250

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SD G+ + +   D       ++  I +MAPE    G  SI  D++SYGV+L E F+   
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
              + + G +N              +VV+  ++R  Q      DC   +  L ++C  E 
Sbjct: 246 ---QPYCGYSN-------------QDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEF 287
Query: 125 PEQRICMTDAAAKLK 139
           P +R    D  ++L+
Sbjct: 288 PSRRPRFKDIHSRLR 302

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SD G+ + +   D       ++  I +MAPE    G  SI  D++SYGV+L E F+   
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
              + + G +N              +VV+  ++R  Q      DC   +  L ++C  E 
Sbjct: 229 ---QPYCGYSN-------------QDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEF 270
Query: 125 PEQRICMTDAAAKLK 139
           P +R    D  ++L+
Sbjct: 271 PSRRPRFKDIHSRLR 285

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    FTG + +         D +            +  SA LD ++      L    +
Sbjct: 217 PP----FTGDSPVSVAYQHVREDPIPPSA------RHEGLSADLDAVV------LKALAK 260
Query: 124 SPEQR 128
           +PE R
Sbjct: 261 NPENR 265

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    FTG + +         D +            +  SA LD ++      L    +
Sbjct: 217 PP----FTGDSPVSVAYQHVREDPIPPSA------RHEGLSADLDAVV------LKALAK 260
Query: 124 SPEQR 128
           +PE R
Sbjct: 261 NPENR 265

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    FTG + +         D +            +  SA LD ++      L    +
Sbjct: 234 PP----FTGDSPVSVAYQHVREDPIPPSA------RHEGLSADLDAVV------LKALAK 277
Query: 124 SPEQR 128
           +PE R
Sbjct: 278 NPENR 282

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    FTG + +         D +            +  SA LD ++      L    +
Sbjct: 217 PP----FTGDSPVSVAYQHVREDPIPPSA------RHEGLSADLDAVV------LKALAK 260
Query: 124 SPEQR 128
           +PE R
Sbjct: 261 NPENR 265

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 33/133 (24%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREE--------QNFSAKLDCLLSIMY 115
            P    FTG +          PD     V    VRE+        +  SA LD ++    
Sbjct: 217 PP----FTGDS----------PDS----VAYQHVREDPIPPSARHEGLSADLDAVV---- 254
Query: 116 LALDCCMESPEQR 128
             L    ++PE R
Sbjct: 255 --LKALAKNPENR 265

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 148 LVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 207 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 248
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 249 WRKEPEER 256

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SDFG+S+ + E D  + ++     + +MA E   + I + + DV+S+GVLL E  T   
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL-- 248
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
                + G            P+RL  ++ T    E  +     +C   +  L L C  + 
Sbjct: 249 -GGNPYPGIP----------PERLFNLLKTGHRMERPD-----NCSEEMYRLMLQCWKQE 292
Query: 125 PEQRICMTDAAAKLKKI 141
           P++R    D +  L+K+
Sbjct: 293 PDKRPVFADISKDLEKM 309

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SDFG+S+ + E D  + ++     + +MA E   + I + + DV+S+GVLL E  T   
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL-- 248
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
                + G            P+RL  ++ T    E  +     +C   +  L L C  + 
Sbjct: 249 -GGNPYPGIP----------PERLFNLLKTGHRMERPD-----NCSEEMYRLMLQCWKQE 292
Query: 125 PEQRICMTDAAAKLKKI 141
           P++R    D +  L+K+
Sbjct: 293 PDKRPVFADISKDLEKM 309

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 141 LVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 199
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 200 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 241
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 242 WRKEPEER 249

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+ QT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    FTG + +         D +            +  SA LD ++      L    +
Sbjct: 217 PP----FTGDSPVSVAYQHVREDPIPPSA------RHEGLSADLDAVV------LKALAK 260
Query: 124 SPEQR 128
           +PE R
Sbjct: 261 NPENR 265

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SDFG+S+ + E D  + ++     + +MA E   + I + + DV+S+GVLL E  T   
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL-- 248
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
                + G            P+RL  ++ T    E  +     +C   +  L L C  + 
Sbjct: 249 -GGNPYPGIP----------PERLFNLLKTGHRMERPD-----NCSEEMYRLMLQCWKQE 292
Query: 125 PEQRICMTDAAAKLKKI 141
           P++R    D +  L+K+
Sbjct: 293 PDKRPVFADISKDLEKM 309

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 144 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 202
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 203 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 244
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 245 WRKEPEER 252

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 148 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 207 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 248
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 249 WRKEPEER 256

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 142 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 200
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 201 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 242
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 243 WRKDPEER 250

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 140 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 198
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 199 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 240
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 241 WRKDPEER 248

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 376 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 417
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 418 WRKEPEER 425

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 376 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 417
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 418 WRKEPEER 425

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 376 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 417
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 418 WRKEPEER 425

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 210 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 251
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 252 WRKDPEER 259

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 400 LVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 459 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 500
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 501 WRKEPEER 508

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 61  T-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P  ++    +N             TE +D   + + +       C   +  +   
Sbjct: 226 TYGKQPWYQL----SN-------------TEAIDC--ITQGRELERPRACPPEVYAIMRG 266
Query: 120 CCMESPEQRICMTDAAAKLKKI 141
           C    P+QR  + D  A+L+ +
Sbjct: 267 CWQREPQQRHSIKDVHARLQAL 288

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 61  T-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P  ++    +N             TE +D   + + +       C   +  +   
Sbjct: 232 TYGKQPWYQL----SN-------------TEAIDC--ITQGRELERPRACPPEVYAIMRG 272
Query: 120 CCMESPEQRICMTDAAAKLKKI 141
           C    P+QR  + D  A+L+ +
Sbjct: 273 CWQREPQQRHSIKDVHARLQAL 294

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 61  T-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P  ++                   TE +D   + + +       C   +  +   
Sbjct: 255 TYGKQPWYQLSN-----------------TEAIDC--ITQGRELERPRACPPEVYAIMRG 295
Query: 120 CCMESPEQRICMTDAAAKLKKIRE 143
           C    P+QR  + D  A+L+ + +
Sbjct: 296 CWQREPQQRHSIKDVHARLQALAQ 319

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 3   AHV--SDFGISKLLG-EGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           AHV  +DFG++KLL  + D  + +    + I + APE  S+ I S + DV+S+GV+L E 
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
Query: 60  FT 61
           FT
Sbjct: 208 FT 209

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+ +L+ + + +  Q      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 318 LVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELT 376
Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 377 TKGRVP---YPGMVN-------------REVLDQ--VERGYRMPCPPECPESLHDLMCQC 418
Query: 121 CMESPEQR 128
             + PE+R
Sbjct: 419 WRKDPEER 426

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ +      + +      + +MAPE    GI +IK DV+SYG+LL E F+
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 188 VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 248 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 283
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 3   AHV--SDFGISKLLG-EGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           AHV  +DFG++KLL  + D  + +    + I + APE  S+ I S + DV+S+GV+L E 
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
Query: 60  FT 61
           FT
Sbjct: 211 FT 212

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 3   AHV--SDFGISKLLG-EGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           AHV  +DFG++KLL  + D  + +    + I + APE  S+ I S + DV+S+GV+L E 
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
Query: 60  FT 61
           FT
Sbjct: 212 FT 213

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 17/137 (12%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +  T   + +MAPE   + I S K DV+SYGVLL E F+
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 62  KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
                     G       + E    RL         RE     A       I  + LDC 
Sbjct: 297 --------LGGSPYPGVQMDEDFCSRL---------REGMRMRAPEYSTPEIYQIMLDCW 339
Query: 122 MESPEQRICMTDAAAKL 138
              P++R    +   KL
Sbjct: 340 HRDPKERPRFAELVEKL 356

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 3   AHV--SDFGISKLLG-EGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           AHV  +DFG++KLL  + D  + +    + I + APE  S+ I S + DV+S+GV+L E 
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
Query: 60  FT 61
           FT
Sbjct: 224 FT 225

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 35/157 (22%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI-----REKFLD 147
           +  DC    P QR         L +I      E++LD
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 35/157 (22%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI-----REKFLD 147
           +  DC    P QR         L +I      E++LD
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 5   VSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKC-DVYSYGVLLMEAFTK 62
           + DFGI+K L E   S+TQT   + T+ Y +PE  + G  + +C D+YS G++L E    
Sbjct: 152 IFDFGIAKALSET--SLTQTNHVLGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEMLVG 208
Query: 63  KKPTNEMFTGKTNLR---NWVSESLPDRLTEV 91
           + P    F G+T +      + +S+P+  T+V
Sbjct: 209 EPP----FNGETAVSIAIKHIQDSVPNVTTDV 236

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG +      D     T    +  +MAPE       S KCDV+S+G++L E  T
Sbjct: 144 VLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
Query: 62  KKKPTNEM 69
           ++KP +E+
Sbjct: 199 RRKPFDEI 206

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG +      D     T    +  +MAPE       S KCDV+S+G++L E  T
Sbjct: 145 VLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
Query: 62  KKKPTNEM 69
           ++KP +E+
Sbjct: 200 RRKPFDEI 207

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 233 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 268
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 269 MMRDCWHAVPSQRPTFKQLVEDLDRI 294

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 181 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 241 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 276
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 277 MMRDCWHAVPSQRPTFKQLVEDLDRI 302

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 177 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 237 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 272
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 273 MMRDCWHAVPSQRPTFKQLVEDLDRI 298

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 248 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 283
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 180 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 240 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 275
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 276 MMRDCWHAVPSQRPTFKQLVEDLDRI 301

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 248 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 283
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 248 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 283
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E FT
Sbjct: 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 289 LGGSPYPGVPVEELF------------------------KLLKEGHRMDKPSNCTNELYM 324
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 325 MMRDCWHAVPSQRPTFKQLVEDLDRI 350

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           VSDFG+++ + + D  ++   T   + + APE       S K DV+++G+L+ E F+  K
Sbjct: 145 VSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203
Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL--DCLLSIMYLALDCCM 122
              +++T                 +EVV   + +  + +   L  D +  IMY    C  
Sbjct: 204 MPYDLYTN----------------SEVV-LKVSQGHRLYRPHLASDTIYQIMY---SCWH 243
Query: 123 ESPEQRICMTDAAAKLKKIREK 144
           E PE+R       + ++ +REK
Sbjct: 244 ELPEKRPTFQQLLSSIEPLREK 265

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+++   +   ++  +  + T  YMAPE    G ++ K D+YS+GV+L+E  T
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 210 YGQKPYRGM 218

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  ++DFG+++++ + + +  +      I + APE  + G  +IK DV+S+G+LLME  
Sbjct: 148 LVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVWSFGILLMEIV 206
Query: 61  T 61
           T
Sbjct: 207 T 207

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  +SDFG+S+   +G  + +  +    + + APE  + G  S + DV+S+G+LL E F+
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 146 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 226 YGQKPYRGM 234

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 226 YGQKPYRGM 234

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 301 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 336
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 337 MMRDCWHAVPSQRPTFKQLVEDLDRI 362

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 206 YGQKPYRGM 214

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK LG  D   T ++     + + APE  +    S + DV+SYGV + EA +
Sbjct: 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
Query: 62  -KKKPTNEM 69
             +KP  +M
Sbjct: 209 YGQKPYKKM 217

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 210 YGQKPYRGM 218

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 224 YGQKPYRGM 232

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 216 YGQKPYRGM 224

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 62  K-KKPTNEM 69
             +KP   M
Sbjct: 204 YGQKPYRGM 212

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+++   +   ++     + T  YMAPE    G ++ K D+YS+GV+L+E  T
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 255 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 290
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 247 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 282
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 283 MMRDCWHAVPSQRPTFKQLVEDLDRI 308

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 242 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 277
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 278 MMRDCWHAVPSQRPTFKQLVEDLDRI 303

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 30/146 (20%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E FT
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 62  ------KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
                    P  E+F                         L++E        +C   +  
Sbjct: 244 LGGSPYPGIPVEELF------------------------KLLKEGHRMDKPANCTNELYM 279
Query: 116 LALDCCMESPEQRICMTDAAAKLKKI 141
           +  DC    P QR         L +I
Sbjct: 280 MMRDCWHAVPSQRPTFKQLVEDLDRI 305

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 190 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 23/145 (15%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L E     T+T ++     I + APE  +    +   D +SYG+++ 
Sbjct: 155 LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 214
Query: 58  EAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E  +  ++P  +M                    +V+  N + ++       DC  S+  L
Sbjct: 215 EVMSFGERPYWDMSN-----------------QDVI--NAIEQDYRLPPPPDCPTSLHQL 255
Query: 117 ALDCCMESPEQRICMTDAAAKLKKI 141
            LDC  +    R       + L K+
Sbjct: 256 MLDCWQKDRNARPRFPQVVSALDKM 280

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  +SDFG+S+   +G  + +  +    + + APE  + G  S + DV+S+G+LL E F+
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 168 VVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLLGEGDGSMT-QTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK LG  D   T ++     + + APE  +    S + DV+SYGV + EA +
Sbjct: 475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
Query: 62  -KKKPTNEM 69
             +KP  +M
Sbjct: 535 YGQKPYKKM 543

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  ++DFG+++++ + + +  +      I + APE  + G  +IK DV+S+G+LLME  
Sbjct: 321 LVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 61  T 61
           T
Sbjct: 380 T 380

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 204 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 1   MVAHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+S++L  + D + T T     I + APE  +    S   DV+S+GV++ E 
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 60  FT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
               ++P   M    TN R+ +S               V E     A + C  ++  L L
Sbjct: 248 LAYGERPYWNM----TN-RDVISS--------------VEEGYRLPAPMGCPHALHQLML 288
Query: 119 DCCMESPEQR 128
           DC  +   QR
Sbjct: 289 DCWHKDRAQR 298

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 62  -KKKPTNEM 69
             +KP   M
Sbjct: 568 YGQKPYRGM 576

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 3   AHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+SK L  + +    QT     + + APE  +    S K DV+S+GVL+ EAF+
Sbjct: 509 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 62  -KKKPTNEM 69
             +KP   M
Sbjct: 569 YGQKPYRGM 577

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F+
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 1   MVAHVSDFGISKLL-GEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+S++L  + D + T T     I + APE  +    S   DV+S+GV++ E 
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 60  FT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
               ++P   M    TN R+ +S               V E     A + C  ++  L L
Sbjct: 248 LAYGERPYWNM----TN-RDVISS--------------VEEGYRLPAPMGCPHALHQLML 288
Query: 119 DCCMESPEQR 128
           DC  +   QR
Sbjct: 289 DCWHKDRAQR 298

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 140 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 150 IADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 152 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 151 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           A +SDFG+++   +    +     + T  YMAPE    G ++ K D+YS+GV+L+E  T
Sbjct: 166 AKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 223

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 150 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 156 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 142 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 62  KKK 64
           + K
Sbjct: 201 EGK 203

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 159 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 327 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 150 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 158 IADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 155 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 139 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 62  KKK 64
           + K
Sbjct: 198 EGK 200

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 144 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 62  KKK 64
           + K
Sbjct: 203 EGK 205

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME 58
           L E
Sbjct: 222 LWE 224

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 159 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 218
Query: 56  LME 58
           L E
Sbjct: 219 LWE 221

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 150 VADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME 58
           L E
Sbjct: 222 LWE 224

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 141 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62  KKK 64
           + K
Sbjct: 200 EGK 202

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 157 VADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY---GSNGIVSIKCDVYSYGVLLM 57
           +   + DFG++ +     GS        ++ +MAPE      N   S + DVYSYG++L 
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 58  EAFTKKKPTNEM 69
           E  T + P + +
Sbjct: 229 ELMTGELPYSHI 240

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 153 VADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 141 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62  KKK 64
           + K
Sbjct: 200 EGK 202

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 150 VADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 157 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 155 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 157 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 156 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  VSDFG+++ + + D   + T T   + + +PE  S    S K DV+S+GVL+ E F+
Sbjct: 161 VIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Query: 62  KKK 64
           + K
Sbjct: 220 EGK 222

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 150 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 156 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 154 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 165 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 154 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L E     T T ++     I + APE  +    +   D +SYG+++ 
Sbjct: 153 LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 212
Query: 58  EAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E  +  ++P  +M                    +V+  N + ++       DC  S+  L
Sbjct: 213 EVMSFGERPYWDMSN-----------------QDVI--NAIEQDYRLPPPPDCPTSLHQL 253
Query: 117 ALDCCMESPEQRICMTDAAAKLKKI 141
            LDC  +    R       + L K+
Sbjct: 254 MLDCWQKDRNARPRFPQVVSALDKM 278

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 160 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 398 VADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 157 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 157 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 359 VADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 145 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 152 VADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 150 VADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
             A +SDFG+++   +    +  +  + T  Y APE    G ++ K D+YS+GV+L+E  
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEII 219
Query: 61  T 61
           T
Sbjct: 220 T 220

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+++L+ + + +  +      I + APE  + G  +IK DV+S+G+LL E  T  +
Sbjct: 146 IADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           ++  ++DFG+++++ + + +  +      I + APE  + G  +IK DV+S+G+LL E  
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDVWSFGILLYEIV 205
Query: 61  TKKKPTNEMFTGKTN 75
           T  K     + G+TN
Sbjct: 206 TYGKIP---YPGRTN 217

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 177 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 177 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F+
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 154 VADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  T
Sbjct: 153 VADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 186 VVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L +     T T  +     I + APE       +   DV+SYG+++ 
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 58  EAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E  +  ++P  +M    TN              +V+  N + ++      +DC  ++  L
Sbjct: 232 EVMSYGERPYWDM----TN-------------QDVI--NAIEQDYRLPPPMDCPSALHQL 272
Query: 117 ALDCCMESPEQR 128
            LDC  +    R
Sbjct: 273 MLDCWQKDRNHR 284

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L +     T T  +     I + APE       +   DV+SYG+++ 
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 58  EAFT-KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E  +  ++P  +M    TN              +V+  N + ++      +DC  ++  L
Sbjct: 206 EVMSYGERPYWDM----TN-------------QDVI--NAIEQDYRLPPPMDCPSALHQL 246
Query: 117 ALDCCMESPEQR 128
            LDC  +    R
Sbjct: 247 MLDCWQKDRNHR 258

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 182 VVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  + DFG+++ +      + +      + +MAPE   N + + + DV+SYG+ L E F+
Sbjct: 206 ITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME 58
           L E
Sbjct: 222 LWE 224

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 236 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1   MVAH-----VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           MVAH     + DFG+++ + E D        +  + +MAPE   +G+ +   D++S+GV+
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME 58
           L E
Sbjct: 222 LWE 224

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 188 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 238 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F+
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-29
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-28
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-27
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-14
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-09
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-06
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	9e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	9e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  107 bits (269), Expect = 5e-29
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFGISK   E D +   T+   T+GY+ PEY   G ++ K DVYS+GV+L E  
Sbjct: 176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

Query: 61  TKKKPTNEMF-TGKTNLRNWVSESLPDR-LTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
             +    +       NL  W  ES  +  L ++VD NL           + L      A+
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL---ADKIR--PESLRKFGDTAV 290

Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   S E R  M D   KL+
Sbjct: 291 KCLALSSEDRPSMGDVLWKLE 311

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  106 bits (266), Expect = 1e-28
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 10/141 (7%)

Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
           A V DFG++KL+   D  +T T    TIG++APEY S G  S K DV+ YGV+L+E  T 
Sbjct: 173 AVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231

Query: 63  KKPTNEMFTG---KTNLRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
           ++  +           L +WV   L + +L  +VD +L   + N+  +   +  ++ +AL
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL---QGNYKDE--EVEQLIQVAL 286

Query: 119 DCCMESPEQRICMTDAAAKLK 139
            C   SP +R  M++    L+
Sbjct: 287 LCTQSSPMERPKMSEVVRMLE 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  101 bits (254), Expect = 6e-27
 Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
             A +SDFG+++   +   ++  +  + T  YMAPE    G ++ K D+YS+GV+L+E  
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEII 228

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDR--LTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
           T     +E       L +   E   +   + + +D  +     +  +    + ++  +A 
Sbjct: 229 TGLPAVDEHR-EPQLLLDIKEEIEDEEKTIEDYIDKKM----NDADST--SVEAMYSVAS 281

Query: 119 DCCMESPEQRICMTDAAAKLKKI 141
            C  E   +R  +      L+++
Sbjct: 282 QCLHEKKNKRPDIKKVQQLLQEM 304

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 82.8 bits (205), Expect = 6e-20
 Identities = 25/151 (16%), Positives = 57/151 (37%), Gaps = 8/151 (5%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-----VSIKCDVYSYGVL 55
           + A ++DFG++     G  +      + T  YMAPE     I       ++ D+Y+ G++
Sbjct: 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227

Query: 56  LMEAFTKKKPTNEMFTG-KTNLRNWVSESLP-DRLTEVVDTNLVREE-QNFSAKLDCLLS 112
           L E  ++    +             + +    + + EVV     R   +++  K   +  
Sbjct: 228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287

Query: 113 IMYLALDCCMESPEQRICMTDAAAKLKKIRE 143
           +     +C     E R+       ++ +++ 
Sbjct: 288 LCETIEECWDHDAEARLSAGCVGERITQMQR 318

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 78.5 bits (194), Expect = 2e-18
 Identities = 28/147 (19%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE---YGSNGIVSIKCDVYSYGVLLM 57
               + DFG++       GS        +I +MAPE      +   S + DVY++G++L 
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216

Query: 58  EAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
           E  T + P    ++   N          D++ E+V    +  + +   + +C   +  L 
Sbjct: 217 ELMTGQLP----YSNINNR---------DQIIEMVGRGSLSPDLS-KVRSNCPKRMKRLM 262

Query: 118 LDCCMESPEQRICMTDAAAKLKKIREK 144
            +C  +  ++R       A+++++  +
Sbjct: 263 AECLKKKRDERPSFPRILAEIEELARE 289

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 72.4 bits (178), Expect = 4e-16
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 34/150 (22%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           V  + DFG +         +   MT    +  +MAPE       S KCDV+S+G++L E 
Sbjct: 144 VLKICDFGTACD-------IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196

Query: 60  FTKKKPTNEMFTGKTNLRNWVSE----SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
            T++KP +E+      +   V       L                       +    I  
Sbjct: 197 ITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK---------------------NLPKPIES 235

Query: 116 LALDCCMESPEQRICMTDAAAKLKKIREKF 145
           L   C  + P QR  M +    +  +   F
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 72.3 bits (178), Expect = 4e-16
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 37/150 (24%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE--YGSNGIVSIKCDVYSYGVLL 56
           + A V+DFG+S+           +++       +MAPE         + K D YS+ ++L
Sbjct: 166 VCAKVADFGLSQQ-------SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218

Query: 57  MEAFTKKKPTNEMFTGKTNLRNWVSE-----SLPDRLTEVVDTNLVREEQNFSAKLDCLL 111
               T + P +E   GK    N + E     ++P+                     DC  
Sbjct: 219 YTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE---------------------DCPP 257

Query: 112 SIMYLALDCCMESPEQRICMTDAAAKLKKI 141
            +  +   C    P++R   +    +L ++
Sbjct: 258 RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 70.4 bits (173), Expect = 2e-15
 Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 34/155 (21%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               V DFG+S+L      S        T  +MAPE   +   + K DVYS+GV+L E  
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233

Query: 61  TKKKPTNEM-------FTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSI 113
           T ++P   +         G    R  +  +L  ++                         
Sbjct: 234 TLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA----------------------- 270

Query: 114 MYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD 148
             +   C    P +R         L+ + +  +  
Sbjct: 271 --IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 68.5 bits (168), Expect = 9e-15
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 30/152 (19%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA---TIGYMAPE---------YGSNGIVSIKCDVYSY 52
           ++DFG+  + G       +         + ++APE                S   DV++ 
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229

Query: 53  GVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLS 112
           G +  E   ++ P    F  +            + +   + T +        +++     
Sbjct: 230 GTIWYELHAREWP----FKTQP----------AEAIIWQMGTGMKPNL----SQIGMGKE 271

Query: 113 IMYLALDCCMESPEQRICMTDAAAKLKKIREK 144
           I  + L C     E+R   T     L+K+ ++
Sbjct: 272 ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 67.3 bits (165), Expect = 2e-14
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           ++DFG+++         T  M+ A    +MAPE     + S   DV+SYGVLL E  T +
Sbjct: 157 ITDFGLAREWHR-----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

Query: 64  KPTNEM 69
            P   +
Sbjct: 212 VPFRGI 217

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 66.1 bits (162), Expect = 8e-14
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 5   VSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           + DFGI+      D  +TQ   T+ T+ YMAPE  S    + + D+Y+   +L E  T  
Sbjct: 175 LVDFGIASATT--DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

Query: 64  KPTNEMFTGKT 74
            P    + G  
Sbjct: 233 PP----YQGDQ 239

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 42/154 (27%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE---YGSNGIVSIKCDVYSYGVLLM 57
           M A +S   +         S      M    ++APE              D++S+ VLL 
Sbjct: 150 MTARISMADVKF-------SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202

Query: 58  EAFTKKKPTNEM-------FTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCL 110
           E  T++ P  ++             LR  +   +   +++                    
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSK-------------------- 242

Query: 111 LSIMYLALDCCMESPEQRICMTDAAAKLKKIREK 144
                L   C  E P +R         L+K+++K
Sbjct: 243 -----LMKICMNEDPAKRPKFDMIVPILEKMQDK 271

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 20/145 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  +SDFG+S+   +G  + +  +    + + APE  + G  S + DV+S+G+LL E F
Sbjct: 250 NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           +    P    +   +N              +  +   V +         C  ++  L   
Sbjct: 310 SLGASP----YPNLSN-------------QQTRE--FVEKGGRLPCPELCPDAVFRLMEQ 350

Query: 120 CCMESPEQRICMTDAAAKLKKIREK 144
           C    P QR   +    +L+ IR++
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIRKR 375

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 29/156 (18%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA------------TIGYMAPEYGSNGIVSIKCD 48
               V+DFG+++L+ +         ++                +MAPE  +      K D
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD 204

Query: 49  VYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLD 108
           V+S+G++L E   +     +                    T     N VR   +     +
Sbjct: 205 VFSFGIVLCEIIGRVNADPDY----------------LPRTMDFGLN-VRGFLDRYCPPN 247

Query: 109 CLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK 144
           C  S   + + CC   PE+R         L+ +R  
Sbjct: 248 CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++D G++         +         T  YM PE        ++    I  D+YS+G++L
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242

Query: 57  MEAFTKKKPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIM 114
            E   +      +   +    + V    S  D    V    L     N  +  +CL  + 
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302

Query: 115 YLALDCCMESPEQRICMTDAAAKLKKIRE 143
            L  +C   +P  R+        L K+ E
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKMSE 331

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 5   VSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           V DFGI++ + +   S+TQT   + T  Y++PE      V  + DVYS G +L E  T +
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

Query: 64  KPTNEMFTGKT 74
            P    FTG +
Sbjct: 217 PP----FTGDS 223

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 60.3 bits (147), Expect = 7e-12
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 5   VSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           + DFGI+K L   + S+TQT   + T+ Y +PE           D+YS G++L E    +
Sbjct: 152 IFDFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

Query: 64  KPTNEMFTGKT 74
            P    F G+T
Sbjct: 210 PP----FNGET 216

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 10/151 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE------YGSNGIVSIKCDVYSY 52
               ++D G++ +  +    +         T  YMAPE               + D++++
Sbjct: 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

Query: 53  GVLLMEAFTKKKPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCL 110
           G++L E   +      +   K    + V    S  D    V          N       L
Sbjct: 210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL 269

Query: 111 LSIMYLALDCCMESPEQRICMTDAAAKLKKI 141
            S+  L  +C  ++P  R+        L KI
Sbjct: 270 TSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 58.3 bits (141), Expect = 4e-11
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA------TIGYMAPEYGSNGI-------VSIKC 47
               +SDFG+S  L             A      TI YMAPE     +          + 
Sbjct: 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216

Query: 48  DVYSYGVLLMEAFTKKK---PTNEMFTGKTNLRNWVSESLP-DRLTEVVDTNLVREE--Q 101
           D+Y+ G++  E F +     P   +   +   +  V      + +  +V     R +  +
Sbjct: 217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE 276

Query: 102 NFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF 145
            +      + S+     DC  +  E R+    A  ++ ++   +
Sbjct: 277 AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               ++DFG++KLLG  +           I +MA E   + I + + DV+SYGV + E  
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T   KP    + G                +E+    ++ + +       C + +  +   
Sbjct: 214 TFGSKP----YDGIPA-------------SEISS--ILEKGERLPQPPICTIDVYMIMRK 254

Query: 120 CCMESPEQR 128
           C M   + R
Sbjct: 255 CWMIDADSR 263

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 21/153 (13%), Positives = 48/153 (31%), Gaps = 10/153 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE------YGSNGIVSIKCDVYSY 52
               ++D G++        ++         T  YMAPE         +     + D+Y+ 
Sbjct: 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 243

Query: 53  GVLLMEAFTKKKPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCL 110
           G++  E   +          +    + V    S+ +    V +  L     N     + L
Sbjct: 244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 303

Query: 111 LSIMYLALDCCMESPEQRICMTDAAAKLKKIRE 143
             +  +  +C   +   R+        L ++ +
Sbjct: 304 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
             A +SDFG+SK LG  D     ++     + + APE  +    S + DV+SYGV + EA
Sbjct: 473 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
            +  +KP    +                   EV+    + + +      +C   +  L  
Sbjct: 533 LSYGQKP----YKKMKG-------------PEVMA--FIEQGKRMECPPECPPELYALMS 573

Query: 119 DCCMESPEQR 128
           DC +   E R
Sbjct: 574 DCWIYKWEDR 583

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEY---GSNGIVSIKCDVYSYGVLLMEAF 60
           +SDFG+ K L  G  S ++   +  T G++APE          +   D++S G +     
Sbjct: 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223

Query: 61  TKKKP 65
           ++   
Sbjct: 224 SEGSH 228

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 55.7 bits (135), Expect = 4e-10
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
             A +SDFG+SK LG  D     ++     + + APE  +    S + DV+SYGV + EA
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
            +  +KP    +                   EV+    + + +      +C   +  L  
Sbjct: 207 LSYGQKP----YKKMKG-------------PEVMA--FIEQGKRMECPPECPPELYALMS 247

Query: 119 DCCMESPEQR 128
           DC +   E R
Sbjct: 248 DCWIYKWEDR 257

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 55.7 bits (135), Expect = 4e-10
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
             A +SDFG+SK L   +     QT     + + APE  +    S K DV+S+GVL+ EA
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 213

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
           F+  +KP    + G                +EV    ++ + +       C   +  L  
Sbjct: 214 FSYGQKP----YRGMKG-------------SEVTA--MLEKGERMGCPAGCPREMYDLMN 254

Query: 119 DCCMESPEQR 128
            C     E R
Sbjct: 255 LCWTYDVENR 264

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 20/129 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               ++DFG++KLLG  +           I +MA E   + I + + DV+SYGV + E  
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T   KP    + G                +E+    ++ + +       C + +  + + 
Sbjct: 214 TFGSKP----YDGIPA-------------SEISS--ILEKGERLPQPPICTIDVYMIMVK 254

Query: 120 CCMESPEQR 128
           C M   + R
Sbjct: 255 CWMIDADSR 263

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 54.7 bits (132), Expect = 8e-10
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 5   VSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK- 62
           ++DFG++KLL       + +    + I + APE  S+ I S + DV+S+GV+L E FT  
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 227

Query: 63  KKPTNEMFTGKTNLRNWVSESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
            K      +        +        L+ +++  L+ E Q   A   C   +  L   C 
Sbjct: 228 DKS----CSPSAEFLRMMGCERDVPALSRLLE--LLEEGQRLPAPPACPAEVHELMKLCW 281

Query: 122 MESPEQR 128
             SP+ R
Sbjct: 282 APSPQDR 288

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 54.6 bits (132), Expect = 8e-10
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 24/147 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMAT---IGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
            +  + DFG+ + L + D      M         + APE       S   D + +GV L 
Sbjct: 158 DLVKIGDFGLMRALPQNDD--HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLW 215

Query: 58  EAFTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
           E FT  ++P    + G                ++++   + +E +      DC   I  +
Sbjct: 216 EMFTYGQEP----WIGLNG-------------SQILH-KIDKEGERLPRPEDCPQDIYNV 257

Query: 117 ALDCCMESPEQRICMTDAAAKLKKIRE 143
            + C    PE R         L + + 
Sbjct: 258 MVQCWAHKPEDRPTFVALRDFLLEAQP 284

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 54.9 bits (132), Expect = 9e-10
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  V+DFG+++L+ E +    +      I + APE    G  +IK DV+S+G+LL E  T
Sbjct: 401 VCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

Query: 62  K 62
           K
Sbjct: 460 K 460

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 54.1 bits (130), Expect = 2e-09
 Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 13/71 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQT-MTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           + D G           +        T G+ APE    G  ++  D+Y+ G  L       
Sbjct: 222 LIDLGAVS-------RINSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDL 273

Query: 64  KPTNEMFTGKT 74
                   G+ 
Sbjct: 274 PT----RNGRY 280

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  V+DFG+++L+ E +    +      I + APE    G  +IK DV+S+G+LL E  T
Sbjct: 318 VCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

Query: 62  K 62
           K
Sbjct: 377 K 377

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            +  V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  
Sbjct: 355 HLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413

Query: 61  TK 62
           T 
Sbjct: 414 TY 415

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 20/129 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               V+DFG++ LL   D  +  +     I +MA E    G  + + DV+SYGV + E  
Sbjct: 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T   +P    + G                 EV D  L+ + +  +    C + +  + + 
Sbjct: 212 TFGAEP----YAGLRL-------------AEVPD--LLEKGERLAQPQICTIDVYMVMVK 252

Query: 120 CCMESPEQR 128
           C M     R
Sbjct: 253 CWMIDENIR 261

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 6/143 (4%)

Query: 5   VSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-K 62
           + DFG++K+L +  +    +    + I + APE  +    S+  DV+S+GV+L E FT  
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
           +K  +        + N     +      +++  L++          C   I  +  +C  
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVF--HLIE--LLKNNGRLPRPDGCPDEIYMIMTECWN 270

Query: 123 ESPEQRICMTDAAAKLKKIREKF 145
            +  QR    D A ++ +IR+  
Sbjct: 271 NNVNQRPSFRDLALRVDQIRDNM 293

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 6/143 (4%)

Query: 5   VSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-K 62
           + DFG++K+L +  +    +    + I + APE  +    S+  DV+S+GV+L E FT  
Sbjct: 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
           +K  +        + N     +      +++  L++          C   I  +  +C  
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVF--HLIE--LLKNNGRLPRPDGCPDEIYMIMTECWN 301

Query: 123 ESPEQRICMTDAAAKLKKIREKF 145
            +  QR    D A ++ +IR++ 
Sbjct: 302 NNVNQRPSFRDLALRVDQIRDQM 324

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 1   MVAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
            +  + DFG++K + EG      +    + + + APE           DV+S+GV L E 
Sbjct: 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC---LLSIMYL 116
            T    +    T    L       +      + +  L+   +       C   +  +M  
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVL--RLTE--LLERGERLPRPDKCPAEVYHLM-- 284

Query: 117 ALDCCMESPEQRICMTDAAAKLKKIREKF 145
             +C       R    +    LK + EK+
Sbjct: 285 -KNCWETEASFRPTFENLIPILKTVHEKY 312

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           + DFG+S+ + +          +  I +MAPE  +    +   DV+ +GV + E      
Sbjct: 532 LGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           KP    F G  N              +V+    +   +      +C  ++  L   C   
Sbjct: 591 KP----FQGVKN-------------NDVI--GRIENGERLPMPPNCPPTLYSLMTKCWAY 631

Query: 124 SPEQR 128
            P +R
Sbjct: 632 DPSRR 636

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 52.4 bits (126), Expect = 5e-09
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 1   MVAHVSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+ ++L +  + + T       I + +PE  +    +   DV+SYG++L E 
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
            +  ++P    +   +N              +V+    V E       +DC  ++  L L
Sbjct: 244 MSYGERP----YWEMSN-------------QDVIK--AVDEGYRLPPPMDCPAALYQLML 284

Query: 119 DCCMESPEQR 128
           DC  +    R
Sbjct: 285 DCWQKDRNNR 294

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.4 bits (126), Expect = 6e-09
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           V  ++DFG+++++ E +    +      I + APE  + G  +IK DV+S+G+LLME  T
Sbjct: 322 VCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

Query: 62  K 62
            
Sbjct: 381 Y 381

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 51.9 bits (125), Expect = 7e-09
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)

Query: 5   VSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
           + DFG++K +         +    + + + APE        I  DV+S+GV L E  T  
Sbjct: 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
              +        +       +      +V+   ++E +      +C   +  L   C   
Sbjct: 227 DSDSSPMALFLKMIGPTHGQMTVT--RLVN--TLKEGKRLPCPPNCPDEVYQLMRKCWEF 282

Query: 124 SPEQRICMTDAAAKLKKI 141
            P  R    +     + +
Sbjct: 283 QPSNRTSFQNLIEGFEAL 300

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 27/147 (18%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  VSDFG+++ +   D   + T T   + + +PE  S    S K DV+S+GVL+ E F
Sbjct: 141 QVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC---LLSIMYL 116
           ++ K P    +  ++N             +EVV+   +               +  IM  
Sbjct: 200 SEGKIP----YENRSN-------------SEVVE--DISTGFRLYKPRLASTHVYQIM-- 238

Query: 117 ALDCCMESPEQRICMTDAAAKLKKIRE 143
              C  E PE R   +    +L +I E
Sbjct: 239 -NHCWRERPEDRPAFSRLLRQLAEIAE 264

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 21/139 (15%)

Query: 5   VSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK- 62
           VSDFG+S++L +  + + T +     I + APE  S    +   DV+S+G+++ E  T  
Sbjct: 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
           ++P    +   +N              EV+    + +       +DC  +I  L + C  
Sbjct: 248 ERP----YWELSN-------------HEVMK--AINDGFRLPTPMDCPSAIYQLMMQCWQ 288

Query: 123 ESPEQRICMTDAAAKLKKI 141
           +   +R    D  + L K+
Sbjct: 289 QERARRPKFADIVSILDKL 307

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           + DFG+S+ + +          +  I +MAPE  +    +   DV+ +GV + E      
Sbjct: 157 LGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 215

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
           KP    F G  N              +V+    +   +      +C  ++  L   C   
Sbjct: 216 KP----FQGVKN-------------NDVIG--RIENGERLPMPPNCPPTLYSLMTKCWAY 256

Query: 124 SPEQR 128
            P +R
Sbjct: 257 DPSRR 261

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 23/146 (15%), Positives = 43/146 (29%), Gaps = 31/146 (21%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEA 59
               +SD GIS  +   D      +    I ++ PE   N    ++  D +S+G  L E 
Sbjct: 158 PFIKLSDPGISITVLPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC-LLSIMYLA 117
            +   KP     +   +                +      +     A     L +++   
Sbjct: 212 CSGGDKP----LSALDS-------------QRKLQ--FYEDRHQLPAPKAAELANLI--- 249

Query: 118 LDCCMESPEQRICMTDAAAKLKKIRE 143
            +C    P+ R         L  +  
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFT 275

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 27/133 (20%)

Query: 1   MVAHVSDFGISKLLG-EGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+S++L  + D + T T     I + APE  +    S   DV+S+GV++ E 
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247

Query: 60  FTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC---LLSIMY 115
               ++P    +   TN              +V+    V E     A + C   L  +M 
Sbjct: 248 LAYGERP----YWNMTN-------------RDVIS--SVEEGYRLPAPMGCPHALHQLM- 287

Query: 116 LALDCCMESPEQR 128
             LDC  +   QR
Sbjct: 288 --LDCWHKDRAQR 298

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           + DFG+S+ + + D        +  I +M+PE  +    +   DV+ + V + E  +  K
Sbjct: 154 LGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212

Query: 64  KPTNEMFTGKTN 75
           +P    F    N
Sbjct: 213 QP----FFWLEN 220

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 20/144 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           +    P    +  K+N              EV++   V          +C   +  +   
Sbjct: 240 SLGYMP----YPSKSN-------------QEVLE--FVTSGGRMDPPKNCPGPVYRIMTQ 280

Query: 120 CCMESPEQRICMTDAAAKLKKIRE 143
           C    PE R        +++   +
Sbjct: 281 CWQHQPEDRPNFAIILERIEYCTQ 304

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 27/144 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK-K 63
           VSDFG+++ +   D  ++   T   + + APE       S K DV+++G+L+ E F+  K
Sbjct: 145 VSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC---LLSIMYLALDC 120
            P    +   TN             +EVV    V +             +  IM     C
Sbjct: 204 MP----YDLYTN-------------SEVVL--KVSQGHRLYRPHLASDTIYQIM---YSC 241

Query: 121 CMESPEQRICMTDAAAKLKKIREK 144
             E PE+R       + ++ +REK
Sbjct: 242 WHELPEKRPTFQQLLSSIEPLREK 265

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA + DFG+++ +            M  + +M PE    GI + K D +S+GVLL E F
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

Query: 61  T 61
           +
Sbjct: 281 S 281

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 50.6 bits (121), Expect = 3e-08
 Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 39/147 (26%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPEY--GSNGIVSIK-----CDVYSYGVL 55
           +SDFG+ K L  G  S    +     T G+ APE    SN + + +      D++S G +
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228

Query: 56  LMEAFTKKKP--------TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL 107
                +K K          + +  G  +L           + E  D              
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD-------------- 274

Query: 108 DCLLSIMYLALDCCMESPEQRICMTDA 134
             L+S M +  D     P +R      
Sbjct: 275 --LISQM-IDHD-----PLKRPTAMKV 293

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  VSDFG+S+ +   D   +   +   + +  PE       S K D++++GVL+ E +
Sbjct: 157 GVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215

Query: 61  TK-KKPTNEMFTGKTN 75
           +  K P    +   TN
Sbjct: 216 SLGKMP----YERFTN 227

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 50.3 bits (120), Expect = 3e-08
 Identities = 18/61 (29%), Positives = 35/61 (57%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F
Sbjct: 230 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289

Query: 61  T 61
           +
Sbjct: 290 S 290

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E +
Sbjct: 326 NVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380

Query: 61  TK 62
           + 
Sbjct: 381 SF 382

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 49.7 bits (119), Expect = 4e-08
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E F
Sbjct: 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287

Query: 61  T 61
           T
Sbjct: 288 T 288

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 49.8 bits (119), Expect = 5e-08
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 22/151 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMAT--IGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
               V+DFG+++ + + +       T A   + +MA E       + K DV+S+GVLL E
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288

Query: 59  AFTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
             T+   P    +                   ++     + + +       C   +  + 
Sbjct: 289 LMTRGAPP----YPDVNT-------------FDIT--VYLLQGRRLLQPEYCPDPLYEVM 329

Query: 118 LDCCMESPEQRICMTDAAAKLKKIREKFLDD 148
           L C     E R   ++  +++  I   F+ +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 49.6 bits (119), Expect = 5e-08
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 37/131 (28%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLLMEAF 60
           DFG++++L   D S  +T    T  YM+PE      Y        K D++S G LL E  
Sbjct: 159 DFGLARIL-NHDTSFAKTFV-GTPYYMSPEQMNRMSYNE------KSDIWSLGCLLYELC 210

Query: 61  TKKKPTNEMFTGKT--NLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
               P    FT  +   L   + E    R+              +S +L+ +++ M L L
Sbjct: 211 ALMPP----FTAFSQKELAGKIREGKFRRIPY-----------RYSDELNEIITRM-LNL 254

Query: 119 DCCMESPEQRI 129
                    R 
Sbjct: 255 K-----DYHRP 260

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 26/147 (17%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           ++  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 170 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC---LLSIMYL 116
           T  K+P    +   +N             TEV++   + + +       C   +  +M  
Sbjct: 230 TYGKQP----WFQLSN-------------TEVIE--CITQGRVLERPRVCPKEVYDVM-- 268

Query: 117 ALDCCMESPEQRICMTDAAAKLKKIRE 143
            L C    P+QR+ + +    L  + +
Sbjct: 269 -LGCWQREPQQRLNIKEIYKILHALGK 294

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 18/61 (29%), Positives = 35/61 (57%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA + DFG+++ +      + +      + +MAPE   + + +++ DV+SYG+LL E F
Sbjct: 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260

Query: 61  T 61
           +
Sbjct: 261 S 261

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 49.1 bits (118), Expect = 7e-08
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
              ++DFG+++L+ E +    +      I + APE  + G  +IK DV+S+G+LL E  T
Sbjct: 147 SCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

Query: 62  K 62
            
Sbjct: 206 H 206

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            +  V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  
Sbjct: 148 HLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

Query: 61  T 61
           T
Sbjct: 207 T 207

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            +  + DFG+++ +      + +      + +MAPE   N + + + DV+SYG+ L E F
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

Query: 61  T 61
           +
Sbjct: 242 S 242

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

Query: 61  T 61
           T
Sbjct: 254 T 254

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           M   V+DFG+S+ +  GD       +   + ++A E  ++ + ++  DV+++GV + E  
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

Query: 61  T 61
           T
Sbjct: 234 T 234

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 18/61 (29%), Positives = 35/61 (57%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F
Sbjct: 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

Query: 61  T 61
           +
Sbjct: 245 S 245

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFG+++ +   D     T     + +MAPE   + + + + DV+S+GVL+ E F
Sbjct: 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299

Query: 61  T 61
           T
Sbjct: 300 T 300

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 22/151 (14%)

Query: 1   MVAHVSDFGISKLLGEGD--GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
               V+DFG+++ + + +      +T     + +MA E       + K DV+S+GVLL E
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 224

Query: 59  AFTK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
             T+   P    +                   ++     + + +       C   +  + 
Sbjct: 225 LMTRGAPP----YPDVNT-------------FDIT--VYLLQGRRLLQPEYCPDPLYEVM 265

Query: 118 LDCCMESPEQRICMTDAAAKLKKIREKFLDD 148
           L C     E R   ++  +++  I   F+ +
Sbjct: 266 LKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 20/148 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           M   V+DFG+SK +  GD      +    + ++A E  ++ + + K DV+++GV + E  
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T+   P    + G  N              E+ D   +          DCL  +  +   
Sbjct: 244 TRGMTP----YPGVQN-------------HEMYD--YLLHGHRLKQPEDCLDELYEIMYS 284

Query: 120 CCMESPEQRICMTDAAAKLKKIREKFLD 147
           C    P  R   +    +L+K+ E   D
Sbjct: 285 CWRTDPLDRPTFSVLRLQLEKLLESLPD 312

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 20/144 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG+++ + E D        +  + +M+PE   +G+ +   DV+S+GV+L E  
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  ++P    + G +N              +V+    V E        +C   +  L   
Sbjct: 235 TLAEQP----YQGLSN-------------EQVLR--FVMEGGLLDKPDNCPDMLFELMRM 275

Query: 120 CCMESPEQRICMTDAAAKLKKIRE 143
           C   +P+ R    +  + +K+  E
Sbjct: 276 CWQYNPKMRPSFLEIISSIKEEME 299

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 18/140 (12%), Positives = 36/140 (25%), Gaps = 40/140 (28%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY----------GSNGIVSIKCDVYSYGV 54
           ++ F      G         ++    G+  PE               +++   D ++ G+
Sbjct: 252 LTGFEHLVRDGAS------AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305

Query: 55  LLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIM 114
            +   +    P     T                 +E +     R  +N    +  LL   
Sbjct: 306 AIYWIWCADLP----NTDDA----------ALGGSEWI----FRSCKNIPQPVRALLEGF 347

Query: 115 YLALDCCMESPEQRICMTDA 134
            L         E R+    A
Sbjct: 348 -LRYP-----KEDRLLPLQA 361

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 18/74 (24%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLLMEAF 60
           DFGI+++L      + +     T  Y++PE      Y +      K D+++ G +L E  
Sbjct: 168 DFGIARVL-NSTVELARACI-GTPYYLSPEICENKPYNN------KSDIWALGCVLYELC 219

Query: 61  TKKKPTNEMFTGKT 74
           T K      F   +
Sbjct: 220 TLKHA----FEAGS 229

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 1   MVAHVSDFGISKLLGEGD--GSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
               V+DFG+++ + + +             + + A E       + K DV+S+GVLL E
Sbjct: 161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWE 220

Query: 59  AFT 61
             T
Sbjct: 221 LLT 223

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 39/133 (29%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLLMEAF 60
           DFG+   L        +T +  T+ YM+PE      YG       + D+Y+ G++L E  
Sbjct: 165 DFGLVTSL---KNDGKRTRSKGTLRYMSPEQISSQDYGK------EVDLYALGLILAELL 215

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
                  E     T+LR+     + D                F  K   LL  + L+   
Sbjct: 216 HVCDTAFETSKFFTDLRD---GIISDI---------------FDKKEKTLLQKL-LSKK- 255

Query: 121 CMESPEQRICMTD 133
               PE R   ++
Sbjct: 256 ----PEDRPNTSE 264

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + D G++ L      S  + + + T  +MAPE           DVY++G+ ++E  T + 
Sbjct: 173 IGDLGLATLKRA---SFAKAV-IGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEY 227

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNL 96
           P +E        R   S   P    +V    +
Sbjct: 228 PYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 23/151 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  + DFG+S+ +   D       TM  I +M PE       + + DV+S+GV+L E F
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254

Query: 61  TK-KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           T  K+P    +   +N             TE +D   + + +       C   +  +   
Sbjct: 255 TYGKQP----WYQLSN-------------TEAID--CITQGRELERPRACPPEVYAIMRG 295

Query: 120 CCMESPEQRICMTDAAAKLKKIREK---FLD 147
           C    P+QR  + D  A+L+ + +    +LD
Sbjct: 296 CWQREPQQRHSIKDVHARLQALAQAPPVYLD 326

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           MV  ++DFG+S+ +   D           I +M PE       + + DV++YGV+L E F
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

Query: 61  T 61
           +
Sbjct: 271 S 271

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               +SDFG+S+ + E D  + ++     + +MA E   + I + + DV+S+GVLL E  
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

Query: 61  T 61
           T
Sbjct: 247 T 247

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.2 bits (112), Expect = 4e-07
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 7   DFGISKLLGEGDGSMTQTMTMA-----------TIGYMAPEYGSNGIVSIKCDVYSYGVL 55
           DFG+   + + D      +T             T  YM+PE       S K D++S G++
Sbjct: 207 DFGLVTAM-DQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265

Query: 56  LMEAFTKKKPTNEMFTGKTNLRN 78
           L E         E     T++RN
Sbjct: 266 LFELLYSFSTQMERVRIITDVRN 288

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +   +SD G+ + +   D       ++  I +MAPE    G  SI  D++SYGV+L E F
Sbjct: 165 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224

Query: 61  T 61
           +
Sbjct: 225 S 225

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  + DFG+++ +      + +      + +MAPE    GI +IK DV+SYG+LL E F
Sbjct: 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268

Query: 61  T 61
           +
Sbjct: 269 S 269

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           VA VSDFG++K     + S TQ      + + APE       S K DV+S+G+LL E ++
Sbjct: 155 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA ++DFG+S+     +  + +TM    + +MA E  +  + +   DV+SYGVLL E  
Sbjct: 179 YVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

Query: 61  T 61
           +
Sbjct: 236 S 236

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE----YGSNGIVSIKCDVYSYGVLLME 58
           DFGIS   G+   S+ +T       YMAPE      S     ++ DV+S G+ L E
Sbjct: 169 DFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYE 221

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----------YGSNGIVSIKCDVYSYG 53
           + DFGI+  +     S+ +   + T+ YM PE             S   +S K DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207

Query: 54  VLLMEAFTKKKPTNEMFTGKTN 75
            +L      K P    F    N
Sbjct: 208 CILYYMTYGKTP----FQQIIN 225

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----------YGSNGIVSIKCDVYSYG 53
           + DFGI+  +     S+ +   + T+ YM PE             S   +S K DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226

Query: 54  VLLMEAFTKKKPTNEMFTGKTN 75
            +L      K P    F    N
Sbjct: 227 CILYYMTYGKTP----FQQIIN 244

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.5 bits (105), Expect = 3e-06
 Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPT 66
           DFG+S   G+   SM  +    T  YM+PE       S++ D++S G+ L+E    + P 
Sbjct: 175 DFGVS---GQLIDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

Query: 67  NEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESP 125
                 +  L            T        R    F       ++I  L      E P
Sbjct: 231 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP 289

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 26/95 (27%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLLMEAFT 61
           DFG+   LG       +        YMAPE     YG+        DV+S G+ ++E   
Sbjct: 200 DFGLLVELGTAG--AGEVQE-GDPRYMAPELLQGSYGT------AADVFSLGLTILEVAC 250

Query: 62  KKKP------TNEMFTGKTNLRNWVSESLPDRLTE 90
             +         ++  G       +       L+ 
Sbjct: 251 NMELPHGGEGWQQLRQGY------LPPEFTAGLSS 279

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP 65
           D G+ +       +   ++   T  YM+PE       + K D++S G LL E    + P
Sbjct: 179 DLGLGRFF-SSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----------YGSNGIVSIKCDVYSYG 53
           + DFGI+  +     S+ +   +  + YM PE             S   +S K DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254

Query: 54  VLLMEAFTKKKPTNEMFTGKTN 75
            +L      K P    F    N
Sbjct: 255 CILYYMTYGKTP----FQQIIN 272

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 8/57 (14%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLLME 58
           DFGIS   G       +  +     YMAPE       +     I+ DV+S G+ L+E
Sbjct: 168 DFGIS---GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 43.1 bits (101), Expect = 9e-06
 Identities = 15/132 (11%), Positives = 33/132 (25%), Gaps = 18/132 (13%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY--GSNGIVSIKCDVYSYGVLLMEAFTK 62
           + D      +G          +   + Y   E+   S    +   + +  G+ +   +  
Sbjct: 235 LGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289

Query: 63  KKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
             P    F   T       +    R+                  +  L+    L  D   
Sbjct: 290 FLP----FGLVTPGIKGSWKRPSLRVPGTDSLAF-GSCTPLPDFVKTLIGRF-LNFD--- 340

Query: 123 ESPEQRICMTDA 134
               +R+   +A
Sbjct: 341 --RRRRLLPLEA 350

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMATIG---YMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK 62
            DFG +  L       +        G   +MAPE         K D++S   +++     
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

Query: 63  KKP 65
             P
Sbjct: 253 CHP 255

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 20/73 (27%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE--YGSNGIVSIKCDVYSYG--VLLMEAF 60
           SDFG SK L    G    T T   T+ YMAPE             D++S G  ++     
Sbjct: 165 SDFGTSKRL---AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTII----- 216

Query: 61  TKKKPTNEMFTGK 73
                  EM TGK
Sbjct: 217 -------EMATGK 222

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 16/59 (27%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           + DFG +K L   +G +   MT   T  ++APE      Y +       CD++S GVLL
Sbjct: 161 ICDFGFAKQLRAENGLL---MTPCYTANFVAPEVLERQGYDA------ACDIWSLGVLL 210

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 17/143 (11%), Positives = 39/143 (27%), Gaps = 45/143 (31%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY-----------GSNGIVSIKCDVYSYG 53
           ++ F      G       + ++  + G+  PE                +++   D ++ G
Sbjct: 247 LTGFEHLVRDGA------RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300

Query: 54  VLLMEAFTKKKPTNEMFTGKTNLRNWVSESLP--DRLTEVVDTNLVREEQNFSAKLDCLL 111
           +++   +        ++             LP            + R  +N    +  LL
Sbjct: 301 LVI---Y-------WIWCAD----------LPITKDAALGGSEWIFRSCKNIPQPVRALL 340

Query: 112 SIMYLALDCCMESPEQRICMTDA 134
               L         E R+    A
Sbjct: 341 EGF-LRYP-----KEDRLLPLQA 357

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 14/57 (24%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG+S    +    +   +   T  Y+APE     Y        KCDV+S GV++
Sbjct: 190 IVDFGLSSFFSKDY-KLRDRL--GTAYYIAPEVLKKKYNE------KCDVWSCGVIM 237

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 16/62 (25%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE--------YGSNGIVSIKCDVYSYGV 54
           + DFG+SK   + +      MT    T  ++APE        YG       KCD +S GV
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP------KCDAWSAGV 264

Query: 55  LL 56
           LL
Sbjct: 265 LL 266

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPE----YGSNGIVSIKCDVYSYGVLLME 58
           DFGIS   G     + + +      YMAPE      +    S+K D++S G+ ++E
Sbjct: 153 DFGIS---GYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 205

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 16/59 (27%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           + DFG ++L    +  +    T   T+ Y APE      Y         CD++S GV+L
Sbjct: 150 IIDFGFARLKPPDNQPL---KTPCFTLHYAAPELLNQNGYDE------SCDLWSLGVIL 199

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 17/59 (28%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG+SK++      M    T+  T GY APE      YG       + D++S G++ 
Sbjct: 192 IADFGLSKIVEHQV-LMK---TVCGTPGYCAPEILRGCAYGP------EVDMWSVGIIT 240

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 32/114 (28%)

Query: 5   VSDFGISKLL--------GEGDGSMTQTMTMAT-IG---YMAPE-------YGSNGIVSI 45
           + DFG++K +         +       +  + + IG   Y+A E       Y        
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE------ 210

Query: 46  KCDVYSYGVLLME-------AFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVV 92
           K D+YS G++  E          +     ++ +          ++      +++
Sbjct: 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKII 264

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 18/76 (23%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLLMEA 59
           + DFG+S +       M + +   T  Y+APE     Y        KCDV+S GV+L   
Sbjct: 180 IVDFGLSAVFENQK-KMKERL--GTAYYIAPEVLRKKYDE------KCDVWSIGVILFIL 230

Query: 60  FTKKKPTNEMFTGKTN 75
                P    F G+T+
Sbjct: 231 LAGYPP----FGGQTD 242

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 31/132 (23%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIG----------YMAPEYGSNGIVSIKCDVYSYGVLL 56
           DFG+   + + +   T    M              YM+PE       S K D++S G++L
Sbjct: 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL 220

Query: 57  MEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL 116
            E         E     T++RN     L  +                      ++  M L
Sbjct: 221 FELLYPFSTQMERVRTLTDVRNLKFPPLFTQ---------------KYPCEYVMVQDM-L 264

Query: 117 ALDCCMESPEQR 128
           +       P +R
Sbjct: 265 SPS-----PMER 271

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 18/59 (30%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG+SK+   G        T   T GY+APE      Y          D +S GV+ 
Sbjct: 150 ITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSK------AVDCWSIGVIT 197

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 18/65 (27%)

Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKC--------DVYSYG 53
            H++DF I+ +L       TQ  TMA T  YMAPE     + S +         D +S G
Sbjct: 154 VHITDFNIAAMLPRE----TQITTMAGTKPYMAPE-----MFSSRKGAGYSFAVDWWSLG 204

Query: 54  VLLME 58
           V   E
Sbjct: 205 VTAYE 209

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 14/57 (24%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG+S    +    M   +   T  Y+APE     Y        KCDV+S GV+L
Sbjct: 165 IIDFGLSTCFQQNT-KMKDRI--GTAYYIAPEVLRGTYDE------KCDVWSAGVIL 212

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 40.6 bits (95), Expect = 7e-05
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 27/84 (32%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIK------CDVYSYGV 54
           HV  SD G++    +      +      T GYMAPE     ++          D +S G 
Sbjct: 330 HVRISDLGLACDFSKK-----KPHASVGTHGYMAPE-----VLQKGVAYDSSADWFSLGC 379

Query: 55  LLMEAFT--------KKKPTNEMF 70
           +L +           K K  +E+ 
Sbjct: 380 MLFKLLRGHSPFRQHKTKDKHEID 403

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 18/59 (30%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG+S    +        M     T  Y+APE     Y        KCDV+S GV+L
Sbjct: 165 IIDFGLSTCFQQN-----TKMKDRIGTAYYIAPEVLRGTYDE------KCDVWSAGVIL 212

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 18/59 (30%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG+++L         +  T A  T  YMAPE              KCD++S GV++
Sbjct: 168 IIDFGLAELFKSD-----EHSTNAAGTALYMAPEVFKRDVTF------KCDIWSAGVVM 215

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 40.4 bits (95), Expect = 7e-05
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 18/61 (29%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE---------YGSNGIVSIKCDVYSYGVL 55
           ++DFG SK+LGE   S+ +T+   T  Y+APE         Y          D +S GV+
Sbjct: 283 ITDFGHSKILGE--TSLMRTL-CGTPTYLAPEVLVSVGTAGYNR------AVDCWSLGVI 333

Query: 56  L 56
           L
Sbjct: 334 L 334

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 20/62 (32%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE---------YGSNGIVSIKCDVYSYGV 54
           ++DFG SK+LGE         T+  T  Y+APE         Y          D +S GV
Sbjct: 158 ITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNR------AVDCWSLGV 207

Query: 55  LL 56
           +L
Sbjct: 208 IL 209

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 18/59 (30%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG++     G     + M     T  Y++P+     YG       +CD +S GV++
Sbjct: 150 LIDFGLAARFKPG-----KMMRTKVGTPYYVSPQVLEGLYGP------ECDEWSAGVMM 197

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           +  FG++  LGE             T  +MAPE      YG         DV+  GV+L
Sbjct: 174 LGGFGVAIQLGESGLVAG---GRVGTPHFMAPEVVKREPYGK------PVDVWGCGVIL 223

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 22/84 (26%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVL 55
           HV  +DFG+SK     +          TI YMAP+       G +  V    D +S GVL
Sbjct: 197 HVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGHDKAV----DWWSLGVL 251

Query: 56  LME---------AFTKKKPTNEMF 70
           + E            +K    E+ 
Sbjct: 252 MYELLTGASPFTVDGEKNSQAEIS 275

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           + DFG+S               + T  Y+APE     Y        KCDV+S GV+L
Sbjct: 170 IIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHGTYDE------KCDVWSTGVIL 217

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 19/64 (29%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGV 54
           H+  SD G++  + EG            T+GYMAPE      Y  +       D ++ G 
Sbjct: 324 HIRISDLGLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFS------PDWWALGC 373

Query: 55  LLME 58
           LL E
Sbjct: 374 LLYE 377

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 16/59 (27%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG++  +     +       A T GY++PE      YG         D+++ GV+L
Sbjct: 154 LADFGLAIEVEGEQQAWF---GFAGTPGYLSPEVLRKDPYGK------PVDLWACGVIL 203

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 17/59 (28%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG++  + + +         A T GY++PE      Y          D+++ GV+L
Sbjct: 149 LADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSK------PVDIWACGVIL 197

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 17/111 (15%), Positives = 29/111 (26%), Gaps = 1/111 (0%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + D G S  +         T    T G+   E  SN   + + D +     +        
Sbjct: 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY 283

Query: 65  PTNEMFTGKTNLRNWVSESL-PDRLTEVVDTNLVREEQNFSAKLDCLLSIM 114
              +   G+             D   E     L   + +    LD L   +
Sbjct: 284 MKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + D G +K L    G +     + T+ Y+APE       ++  D +S+G L 
Sbjct: 165 IIDLGYAKEL--DQGELCTEF-VGTLQYLAPELLEQKKYTVTVDYWSFGTLA 213

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 19/60 (31%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA--TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG++  + +      +       T GY++PE      Y          D+++ GV+L
Sbjct: 172 LADFGLAIEVNDS-----EAWHGFAGTPGYLSPEVLKKDPYSK------PVDIWACGVIL 220

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 15/58 (25%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG +K     +   T      T  Y+APE      Y         CD++S GV++
Sbjct: 205 LTDFGFAKETTSHNSLTT---PCYTPYYVAPEVLGPEKYDK------SCDMWSLGVIM 253

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG++  L   +      +T AT  + APE      V    D+++ GVL 
Sbjct: 192 IIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 240

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 27/85 (31%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGV 54
           +V  SD G++  L  G    T+T   A T G+MAPE      Y  +       D ++ GV
Sbjct: 327 NVRISDLGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGEEYDFS------VDYFALGV 377

Query: 55  LLME---------AFTKKKPTNEMF 70
            L E         A  +K    E+ 
Sbjct: 378 TLYEMIAARGPFRARGEKVENKELK 402

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 38.7 bits (90), Expect = 4e-04
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG++  L     S+  T   A   + APE      V    D++S GVL 
Sbjct: 298 LIDFGLTAHLDPKQ-SVKVTTGTA--EFAAPEVAEGKPVGYYTDMWSVGVLS 346

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 18/59 (30%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------YGSNGIVSIKCDVYSYGVLL 56
           ++DFG +K   +         T   T  Y+APE      Y         CD++S GV++
Sbjct: 172 LTDFGFAKETTQN-----ALQTPCYTPYYVAPEVLGPEKYDK------SCDMWSLGVIM 219

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 18/78 (23%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMATIGYMAPE-----YGSNGIVSIKCDVYSYGVLL 56
           H+  +DFG    L E     +    + T  Y++PE      G  G    +CD +S GV +
Sbjct: 213 HIRLADFGSCLKLMEDGTVQSSVA-VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271

Query: 57  MEAFTKKKPTNEMFTGKT 74
                      EM  G+T
Sbjct: 272 Y----------EMLYGET 279

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + +FG ++ L  GD      +      Y APE   + +VS   D++S G L+
Sbjct: 145 IIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG++  + +G           T  ++APE  +   + ++ D++S GV+ 
Sbjct: 160 LIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSI--------KCDVYSYGVLL 56
           ++DFG ++ L   D     ++   T  Y+ P+     ++            D++S GV  
Sbjct: 157 LTDFGAAREL--EDDEQFVSL-YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

Query: 57  MEAFTKKKPTNEMFTGKTN---LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLS 112
             A T   P       + N   +   ++      ++ V        + +    + C LS
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLS 272

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 37.6 bits (88), Expect = 6e-04
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 22/68 (32%)

Query: 5   VSDFGISKLLGEG-DGSMTQTMTMATI----GYMAPE-----------YGSNGIVSIKCD 48
           + DF +   +    D S   T  + T      YMAPE           Y        +CD
Sbjct: 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK------RCD 208

Query: 49  VYSYGVLL 56
           ++S GV+L
Sbjct: 209 LWSLGVIL 216

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG++  + +G           T  ++APE  +   + ++ D++S GV+ 
Sbjct: 160 LIDFGLAHEIEDGV-EFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 23/65 (35%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPE------------YGSNGIVSIKCDVYS 51
           ++DFG S  L  G+    +   +  T  Y+APE            YG       + D++S
Sbjct: 165 LTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGK------EVDMWS 214

Query: 52  YGVLL 56
            GV++
Sbjct: 215 TGVIM 219

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 14/119 (11%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSI--------KCDVYSYGVLL 56
           ++DFG ++ L   D     ++   T  Y+ P+     ++            D++S GV  
Sbjct: 157 LTDFGAAREL--EDDEQFVSL-YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

Query: 57  MEAFTKKKPTNEMFTGKTN---LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLS 112
             A T   P       + N   +   ++      ++ V        + +    + C LS
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLS 272

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG+S+ +G     + +   M T  Y+APE  +   ++   D+++ G++ 
Sbjct: 175 IVDFGMSRKIGHAC-ELRE--IMGTPEYLAPEILNYDPITTATDMWNIGIIA 223

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 17/77 (22%)

Query: 4   HV--SDFGISKLLGEGDGSMTQTMTMATIGYMAPE----YGSNGIVSIKCDVYSYGVLLM 57
           H+  +DFG    + +       T    T  Y++PE     G +G    +CD +S GV L 
Sbjct: 206 HLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264

Query: 58  EAFTKKKPTNEMFTGKT 74
                     EM  G T
Sbjct: 265 ----------EMLVGDT 271

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFG++  +  G+          T  ++APE  +   + ++ D++S GV+ 
Sbjct: 159 IIDFGLAHKIDFGN-EFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 37.4 bits (87), Expect = 9e-04
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 29/68 (42%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATI----GYMAPE------------YGSNGIVSIKCD 48
           +SDFG S  L  G+        +  +    GY+APE            YG       + D
Sbjct: 241 LSDFGFSCHLEPGE-------KLRELCGTPGYLAPEILKCSMDETHPGYGK------EVD 287

Query: 49  VYSYGVLL 56
           +++ GV+L
Sbjct: 288 LWACGVIL 295

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLL 56
           + DFGI+  +  G+          T  ++APE  +   + ++ D++S GV+ 
Sbjct: 153 LIDFGIAHKIEAGN-EFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.92
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.9
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.9
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.89
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.89
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.89
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.89
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.88
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.88
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.88
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.88
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.88
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.88
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.87
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.87
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.87
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.87
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.87
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.87
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.87
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.87
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.87
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.87
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.87
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.87
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.87
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.86
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.86
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.86
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.86
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.86
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.86
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.86
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.86
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.86
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.86
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.86
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.86
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.86
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.86
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.85
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.85
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.85
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.85
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.85
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.85
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.85
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.85
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.85
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.85
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.85
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.85
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.85
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.85
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.85
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.84
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.84
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.84
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.84
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.84
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.84
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.84
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.84
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.84
3niz_A	311	Rhodanese family protein; structural genomics, str	99.84
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.84
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.84
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.84
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.84
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.84
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.84
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.84
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.84
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.84
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.84
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.83
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.83
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.83
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.83
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.83
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.83
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.83
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.83
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.83
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.83
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.83
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.83
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.83
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.83
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.83
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.82
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.82
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.82
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.82
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.82
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.82
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.82
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.82
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.82
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.82
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.82
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.82
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.82
3bhy_A	283	Death-associated protein kinase 3; death associate	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.81
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.81
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.81
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.81
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.81
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.81
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.81
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.81
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.81
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.81
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.81
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.81
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.81
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.8
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.8
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.8
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.8
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.8
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.8
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.8
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.8
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.8
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.8
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.8
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.8
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.8
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.8
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.8
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.8
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.8
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.8
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.8
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.8
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.79
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.79
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.79
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.79
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.79
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.79
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.79
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.79
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.78
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.78
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.78
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.78
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.78
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.78
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.78
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.78
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.78
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.78
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.77
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.77
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.77
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.77
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.75
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.73
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.69
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.61
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.51
3uqc_A	286	Probable conserved transmembrane protein; structur	99.39
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.58
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.91
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	86.22

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=2e-31  Score=180.82  Aligned_cols=126  Identities=22%  Similarity=0.340  Sum_probs=93.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+.........+...||+.|+|||++.+..|+.++|||||||++||+++ |..||...... ..+...+
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~~~i  301 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRL  301 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHHHHH
Confidence            689999999998755443444455679999999999998899999999999999999998 89998542211 1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ..+.                 ....+..++.++.+++.+||+.||++|||+.||+++|+++.+..
T Consensus       302 ~~g~-----------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          302 KEGT-----------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             HHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HcCC-----------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence            1110                 01112234557889999999999999999999999999987653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=5.2e-31  Score=175.54  Aligned_cols=130  Identities=22%  Similarity=0.365  Sum_probs=85.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||+|+..............+||+.|+|||++.+   ..|+.++|||||||++||+++|+.||...... .....
T Consensus       170 ~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~  248 (307)
T 3omv_A          170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIF  248 (307)
T ss_dssp             EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHH
T ss_pred             cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHH
Confidence            689999999987654332333445689999999998853   35899999999999999999999998532111 01111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .....       ...+...      ..+..++..+.+++.+||+.+|++|||+.||+++|+.++..+
T Consensus       249 ~~~~~-------~~~p~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          249 MVGRG-------YASPDLS------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HHHTT-------CCCCCST------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HHhcC-------CCCCCcc------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            11110       0001110      011234567889999999999999999999999999887643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=7.7e-31  Score=176.57  Aligned_cols=125  Identities=26%  Similarity=0.408  Sum_probs=83.5

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+...........+...||+.|+|||++.+..|+.++|||||||++||+++ |+.||.....  ......
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~  272 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDC  272 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHHH
Confidence            4689999999997654433333445679999999999999899999999999999999998 8999853211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      +           ....      ..+.+..++.++.+++.+||+.||++|||+.||+++|+.+.+.
T Consensus       273 i-----------~~g~------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          273 I-----------TQGR------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             H-----------HHTC------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             H-----------HcCC------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            1           1100      0111233456788999999999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=1.9e-30  Score=173.24  Aligned_cols=144  Identities=14%  Similarity=0.182  Sum_probs=90.2

Q ss_pred             CceEecccccceeccCCCCC--cccccccccccccCcCccCCC------CccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            1 MVAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNG------IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      +++||+|||+|+........  ......+||+.|+|||++.+.      .++.++|||||||++||+++|..|+......
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            46899999999987543321  122345799999999988653      3678999999999999999998776432221


Q ss_pred             ccchHHhhhhh-c-cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           73 KTNLRNWVSES-L-PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        73 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ........... . ......+......+..+......+.+..+.+++.+||+.||++|||+.||++.|+++.++
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            11111100000 0 000111111111111111112235667788999999999999999999999999998765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=4.4e-31  Score=176.29  Aligned_cols=122  Identities=25%  Similarity=0.390  Sum_probs=89.3

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+...........+...||+.|+|||++.+..|+.++|||||||++||+++ |..||.....  ..+.. 
T Consensus       182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~-  258 (308)
T 4gt4_A          182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVE-  258 (308)
T ss_dssp             GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHH-
T ss_pred             CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHH-
Confidence            3689999999987654332333445679999999999988899999999999999999998 8889853211  11111 


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                                .+.....      .+.+..++..+.+++.+||+.||++|||++||++.|+..
T Consensus       259 ----------~i~~~~~------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          259 ----------MIRNRQV------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             ----------HHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ----------HHHcCCC------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                      1111111      112234556788999999999999999999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=1.1e-30  Score=173.80  Aligned_cols=125  Identities=23%  Similarity=0.357  Sum_probs=91.0

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+...............||+.|+|||++.+..|+.++|||||||++||+++ |+.||.....  ..+.  
T Consensus       165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~--  240 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVI--  240 (299)
T ss_dssp             GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHH--
T ss_pred             CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH--
Confidence            3689999999987654332223334568999999999998899999999999999999998 8999853211  1111  


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                               ..+.....      .+.+..++.++.+++.+||+.||++|||++||++.|+++.+.
T Consensus       241 ---------~~i~~~~~------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          241 ---------ECITQGRV------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             ---------HHHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------HHHHcCCC------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                     11111111      111233456788999999999999999999999999988764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.95  E-value=2.2e-29  Score=169.37  Aligned_cols=128  Identities=19%  Similarity=0.159  Sum_probs=89.8

Q ss_pred             ceEecccccceeccCCCC---CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG---SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~---~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||+|+.+.....   .......+||+.|+|||++.+..|+.++||||+||++|+|++|..||....... ....
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~  267 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLK  267 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHH
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHH
Confidence            489999999998754321   112234579999999999999899999999999999999999999985422211 1111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ......          ..      ...+......+.+++.+||+.||++|||+.|++++|....+...
T Consensus       268 i~~~~~----------~~------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          268 IASEPP----------PI------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             HHHSCC----------GG------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHcCCC----------Cc------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            111000          00      01122344568889999999999999999999999998887654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1.8e-28  Score=162.31  Aligned_cols=114  Identities=18%  Similarity=0.300  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.....    .....+||+.|+|||++.+ .|+.++|||||||++++|++|..||...... ..+...+ 
T Consensus       170 ~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~~~i-  242 (290)
T 3fpq_A          170 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRV-  242 (290)
T ss_dssp             CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHH-
T ss_pred             CEEEEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHHHHH-
Confidence            5899999999864322    2345689999999998865 6999999999999999999999998532111 0011000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                ... ....    ..+.....++.+++.+||+.||++|||+.|++++
T Consensus       243 ----------~~~-~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          243 ----------TSG-VKPA----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ----------TTT-CCCG----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ----------HcC-CCCC----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                      000 0000    0011123457889999999999999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.94  E-value=1.5e-28  Score=165.85  Aligned_cols=117  Identities=16%  Similarity=0.184  Sum_probs=84.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.+....  ......+||+.|+|||++.+..|+.++||||+||+++||++|..||.....  ......+.
T Consensus       208 ~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~  283 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR  283 (346)
T ss_dssp             CEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred             CEEEecCcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHH
Confidence            58999999999875432  233456899999999999988999999999999999999999999853111  00110111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..        ..       +....+.....++.+|+.+||+.||++|||+.|++++
T Consensus       284 ~~--------~~-------~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          284 DN--------LP-------PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             HS--------SC-------CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cC--------CC-------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            00        00       0111112334567889999999999999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.94  E-value=8.9e-28  Score=165.64  Aligned_cols=117  Identities=17%  Similarity=0.191  Sum_probs=84.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+....  ......+||+.|+|||++.+..|+.++||||+||++++|++|..||.....  ......+.
T Consensus       285 ~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~  360 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIR  360 (423)
T ss_dssp             CEEECCCTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred             CEEEecCccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHH
Confidence            58999999999875432  234456899999999999988999999999999999999999999853111  00111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...        ...       ..........+.+|+.+||..||++|||+.|++++
T Consensus       361 ~~~--------~~~-------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          361 DNL--------PPR-------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             HSC--------CCC-------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cCC--------CCC-------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            000        000       11112234567889999999999999999999885

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=6.8e-28  Score=162.82  Aligned_cols=115  Identities=20%  Similarity=0.298  Sum_probs=83.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.+...  .......+||+.|+|||++.+..|+.++||||+||++|+|++|..||.....     ...  
T Consensus       163 ~vKl~DFGla~~~~~~--~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~--  233 (350)
T 4b9d_A          163 TVQLGDFGIARVLNST--VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNL--  233 (350)
T ss_dssp             CEEECSTTEESCCCHH--HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHH--
T ss_pred             CEEEcccccceeecCC--cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHH--
Confidence            5899999999876422  1123456799999999999998999999999999999999999999853111     001  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.......      .+.....++.+|+.+||+.||++|||+.|++++
T Consensus       234 ------~~~i~~~~~~~------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          234 ------VLKIISGSFPP------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             ------HHHHHHTCCCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------HHHHHcCCCCC------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  11111111100      112234567889999999999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=1.9e-27  Score=158.31  Aligned_cols=116  Identities=12%  Similarity=0.195  Sum_probs=84.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+............+||+.|+|||++.+..|+.++||||+||++++|++|..||....  ...+     
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~-----  242 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLI-----  242 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH-----
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHH-----
Confidence            589999999998754433334456789999999999998899999999999999999999999985311  1111     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+....+       ..+.....++.+++.+||+.||++|||++|++.+
T Consensus       243 ------~~~i~~~~~-------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          243 ------FAKIIKLEY-------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  285 (311)
T ss_dssp             ------HHHHHHTCC-------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred             ------HHHHHcCCC-------CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence                  111111111       0111223467889999999999999999997544

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=4.2e-27  Score=154.58  Aligned_cols=113  Identities=19%  Similarity=0.283  Sum_probs=72.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+......   .....+||+.|+|||++.+..+ +.++||||+||++++|++|..||....     .....
T Consensus       150 ~vkl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~  221 (275)
T 3hyh_A          150 NVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLF  221 (275)
T ss_dssp             CEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred             CEEEeecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHH
Confidence            58999999998764322   2344689999999999988775 578999999999999999999985311     11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        .+.....       ..+.....++.+++.+||+.||++|||++|++++
T Consensus       222 ~--------~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          222 K--------NISNGVY-------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             H--------HHHHTCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             H--------HHHcCCC-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            1        1110000       0111233467889999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=1.7e-26  Score=153.55  Aligned_cols=114  Identities=21%  Similarity=0.228  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+......  ......+||+.|+|||++.+..|+.++||||+||++|+|++|..||.....  ..+     
T Consensus       164 ~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~-----  234 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KET-----  234 (304)
T ss_dssp             CEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH-----
T ss_pred             CEEecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHH-----
Confidence            58999999998754322  123446899999999999988999999999999999999999999853111  001     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                            ...+.....       ..+.....++.+++.+||+.||++|||+     +|++++
T Consensus       235 ------~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          235 ------MTMILKAKL-------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             ------HHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             ------HHHHHcCCC-------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence                  111111110       0112234567889999999999999994     677764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.92  E-value=3.8e-25  Score=148.87  Aligned_cols=143  Identities=16%  Similarity=0.242  Sum_probs=92.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCCCcc-c
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT-N   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~-~   75 (153)
                      .+||+|||+++...............||+.|+|||.+.+     ..++.++|||||||+++++++|..||........ .
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            589999999988754433323344578999999998876     3466789999999999999999999864332211 1


Q ss_pred             hHHhhhhh-ccchhhh-hccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           76 LRNWVSES-LPDRLTE-VVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        76 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ........ ....... ......................+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11110000 0000111 111111111111111234566789999999999999999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=1.1e-25  Score=149.77  Aligned_cols=115  Identities=23%  Similarity=0.282  Sum_probs=71.2

Q ss_pred             ceEecccccceeccCCCCC----------cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGS----------MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~----------~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      ++||+|||+|+.+......          ...+..+||+.|+|||++.+..|+.++||||+||+++||++   ||.....
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~  232 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME  232 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence            5899999999987543211          12234579999999999999899999999999999999995   6532100


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          ...        .+.........      +......+...+++.+||+.||++|||+.|++++
T Consensus       233 ----~~~--------~~~~~~~~~~p------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          233 ----RVR--------TLTDVRNLKFP------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             ----HHH--------HHHHHHTTCCC------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ----HHH--------HHHHHhcCCCC------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                000        00111111100      1112334456789999999999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.90  E-value=1.4e-24  Score=147.97  Aligned_cols=67  Identities=19%  Similarity=0.270  Sum_probs=51.3

Q ss_pred             ceEecccccceeccCCCC--------------------------CcccccccccccccCcCccCCC-CccccccchhhhH
Q 043099            2 VAHVSDFGISKLLGEGDG--------------------------SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGV   54 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--------------------------~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~   54 (153)
                      .+||+|||+|+.......                          ....+..+||+.|+|||++.+. .|+.++||||+||
T Consensus       156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            479999999986543210                          0112335799999999998775 5899999999999


Q ss_pred             HHHHHHhcCCCCCc
Q 043099           55 LLMEAFTKKKPTNE   68 (153)
Q Consensus        55 ~~~~~~~g~~p~~~   68 (153)
                      ++++|++|..||..
T Consensus       236 il~ell~G~~Pf~~  249 (361)
T 4f9c_A          236 IFLSLLSGRYPFYK  249 (361)
T ss_dssp             HHHHHHHTCSSSSC
T ss_pred             HHHHHHHCCCCCCC
Confidence            99999999999854

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.90  E-value=8.9e-24  Score=142.05  Aligned_cols=138  Identities=33%  Similarity=0.481  Sum_probs=96.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc-cchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK-TNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~   80 (153)
                      .+||+|||+++...............|++.|+|||.+.+..++.++||||||++++++++|..||....... .....+.
T Consensus       177 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~  256 (321)
T 2qkw_B          177 VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA  256 (321)
T ss_dssp             CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHT
T ss_pred             CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHh
Confidence            589999999987643322223344568999999999887789999999999999999999999986433322 1222221


Q ss_pred             hhhc-cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESL-PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .... .......++.....     .........+.+++.+||+.||++|||+.||+++|+.+.+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          257 VESHNNGQLEQIVDPNLAD-----KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHTTTCCCSSSSSSCTT-----CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             hhccccccHHHhcChhhcc-----ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            1111 11112222222111     12356677899999999999999999999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.90  E-value=1.2e-23  Score=140.12  Aligned_cols=132  Identities=19%  Similarity=0.289  Sum_probs=87.5

Q ss_pred             ceEecccccceeccCCCCCc--ccccccccccccCcCccCCC------CccccccchhhhHHHHHHHhc----------C
Q 043099            2 VAHVSDFGISKLLGEGDGSM--TQTMTMATIGYMAPEYGSNG------IVSIKCDVYSYGVLLMEAFTK----------K   63 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~g----------~   63 (153)
                      .+||+|||+++.........  ......||+.|+|||.+.+.      .++.++|||||||+++++++|          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            58999999998765433211  12334789999999998775      455789999999999999999          6


Q ss_pred             CCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           64 KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      .||....................        ......+...........+.+++.+||+.||.+|||+.||++.|+++
T Consensus       231 ~pf~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          231 PPFYDVVPNDPSFEDMRKVVCVD--------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTS--------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccccCCCCcchhhhhHHHhcc--------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            66543332222222111111000        00000000111234667899999999999999999999999999986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.90  E-value=1.4e-24  Score=155.57  Aligned_cols=117  Identities=20%  Similarity=0.188  Sum_probs=83.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+....   .....+||+.|+|||++.+..|+.++||||+||++++|++|..||.....  .   ..  
T Consensus       295 ~vKl~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~---~~--  364 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--D---ET--  364 (573)
T ss_dssp             CEEECCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--H---HH--
T ss_pred             CEEEeeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--H---HH--
Confidence            57999999999875432   23445899999999999998999999999999999999999999853111  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+........   ..........+.+|+.+||+.||.+|||+.|++++
T Consensus       365 ------~~~i~~~~~~~~---~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          365 ------LRNVKSCDWNMD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             ------HHHHHTTCCCCC---SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ------HHHHHhCCCCCC---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  011111100000   00011233467889999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.89  E-value=2.3e-24  Score=145.64  Aligned_cols=149  Identities=17%  Similarity=0.196  Sum_probs=91.1

Q ss_pred             ceEecccccceeccCCCC------CcccccccccccccCcCccCC-------CCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG------SMTQTMTMATIGYMAPEYGSN-------GIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~------~~~~~~~~g~~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.+.....      ........||+.|+|||.+.+       ..++.++|||||||+++++++|..|+..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            589999999987653211      112234568999999999876       3566789999999999999999776533


Q ss_pred             cCCCccc---hHHhhhhhc-cchhhhhcc-ccchh-hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           69 MFTGKTN---LRNWVSESL-PDRLTEVVD-TNLVR-EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        69 ~~~~~~~---~~~~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      .......   ......... .......+. ..... .+............+.+++.+||+.||++|||+.||++.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            2221110   000000000 000000000 00000 01111112345667999999999999999999999999999999


Q ss_pred             HHhhhcCC
Q 043099          143 EKFLDDGA  150 (153)
Q Consensus       143 ~~~~~~~~  150 (153)
                      ..+..+.+
T Consensus       318 ~~~~~~~~  325 (336)
T 3g2f_A          318 MIWERNKS  325 (336)
T ss_dssp             HCCCC---
T ss_pred             HHHHhccc
Confidence            88765543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=5.6e-23  Score=138.75  Aligned_cols=136  Identities=18%  Similarity=0.301  Sum_probs=87.1

Q ss_pred             ceEecccccceeccCCCCC--cccccccccccccCcCccCCCCcccc------ccchhhhHHHHHHHhcC----------
Q 043099            2 VAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNGIVSIK------CDVYSYGVLLMEAFTKK----------   63 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~------~dv~s~g~~~~~~~~g~----------   63 (153)
                      .+||+|||+++.+......  .......||+.|+|||.+.+..+...      +|||||||+++++++|.          
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            5899999999876533211  11234578999999999877655544      99999999999999994          


Q ss_pred             CCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           64 KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .|+.................        .........+...........+.+++.+||+.||.+|||+.||+++|+.+.+
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          260 LPYHDLVPSDPSYEDMREIV--------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             CTTTTTSCSSCCHHHHHHHH--------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccHhhhcCCCCchhhhHHHH--------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            44432222211111111100        0011111111111124567789999999999999999999999999999987


Q ss_pred             Hh
Q 043099          144 KF  145 (153)
Q Consensus       144 ~~  145 (153)
                      ..
T Consensus       332 ~~  333 (337)
T 3mdy_A          332 SQ  333 (337)
T ss_dssp             TT
T ss_pred             hc
Confidence            54

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=5.7e-24  Score=145.59  Aligned_cols=126  Identities=24%  Similarity=0.366  Sum_probs=90.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..||.....  ..+....
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--~~~~~~~  318 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLL  318 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence            589999999997654332223334467889999999988889999999999999999998 8888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ...           . .     ...+......+.+++.+||+.+|.+|||+.|+++.|+.+.....
T Consensus       319 ~~~-----------~-~-----~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          319 KEG-----------H-R-----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             HTT-----------C-C-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             hcC-----------C-C-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            100           0 0     00112234568889999999999999999999999999987654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.89  E-value=2e-24  Score=148.66  Aligned_cols=135  Identities=17%  Similarity=0.098  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+|+.+.....  .......+||+.|+|||++.+. .++.++||||+||++++|++|..||..... ...+..
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~  274 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQL  274 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHH
Confidence            579999999987643221  2233456899999999998775 578999999999999999999999853211 111111


Q ss_pred             hhhhh-cc--chhhhhccccchh----hhhcchhh-----HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSES-LP--DRLTEVVDTNLVR----EEQNFSAK-----LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~-~~--~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..... .+  .............    .....+.+     .....++.+|+.+||..||++|||+.|++++
T Consensus       275 I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          275 IMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             HHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            11100 00  0000000000000    00000000     1123567889999999999999999999886

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.89  E-value=3.9e-24  Score=143.21  Aligned_cols=126  Identities=21%  Similarity=0.283  Sum_probs=78.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||||++++++++|..||......  .......
T Consensus       177 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~  252 (309)
T 3p86_A          177 TVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVG  252 (309)
T ss_dssp             CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHH
T ss_pred             cEEECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH
Confidence            58999999998654321  1233457899999999999888999999999999999999999998532110  0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                                 ...     .....+......+.+++.+||+.+|.+|||+.|+++.|+.+......
T Consensus       253 -----------~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          253 -----------FKC-----KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             -----------HSC-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             -----------hcC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence                       000     00011122345688899999999999999999999999999876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.89  E-value=2.6e-23  Score=139.95  Aligned_cols=133  Identities=34%  Similarity=0.478  Sum_probs=93.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccC---CCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMF---TGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~---~~~~~~~~   78 (153)
                      .+||+|||+++...... ........|++.|+|||.+.+..++.++||||+|++++++++|..||....   ........
T Consensus       172 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CEEECCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             CEEeccCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            58999999998765332 223344568999999999988789999999999999999999999985311   12222333


Q ss_pred             hhhhhcc-chhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 043099           79 WVSESLP-DRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKK  140 (153)
Q Consensus        79 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~  140 (153)
                      +...... .......+....     ..........+.+++.+||+.+|.+|||+.||+++|+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDLQ-----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTCT-----TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHHhhchhhhhhcChhhc-----cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            3322221 111222222111     12235667889999999999999999999999999975

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.89  E-value=1.9e-24  Score=148.24  Aligned_cols=125  Identities=26%  Similarity=0.429  Sum_probs=87.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..|+.....  .......
T Consensus       251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~  328 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFV  328 (377)
T ss_dssp             CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHH
T ss_pred             cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            589999999987543221111122345778999999987789999999999999999998 8888753211  0111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...                 ...+.+..++..+.+++.+||+.+|.+|||+.+|++.|+.+..+.
T Consensus       329 ~~~-----------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~  376 (377)
T 3cbl_A          329 EKG-----------------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH  376 (377)
T ss_dssp             HTT-----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HcC-----------------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence            100                 001112223456888999999999999999999999999998763

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.89  E-value=4.1e-24  Score=145.54  Aligned_cols=126  Identities=22%  Similarity=0.343  Sum_probs=89.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............||+.|+|||.+.+..++.++||||||++++++++ |..||....... ......
T Consensus       231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~  309 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRL  309 (359)
T ss_dssp             CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHH
T ss_pred             cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHH
Confidence            589999999987654433333445578899999999888889999999999999999998 999975322111 111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....                 ....+......+.+++.+||+.+|.+|||+.||+++|+.+.+..
T Consensus       310 ~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          310 KEGT-----------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HcCC-----------------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            1000                 00011123346788999999999999999999999999988753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=2.8e-24  Score=144.89  Aligned_cols=124  Identities=22%  Similarity=0.383  Sum_probs=86.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..||.....  .......
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~  232 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL  232 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH
T ss_pred             CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHH
Confidence            589999999998754433333334457889999999988889999999999999999999 9999753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ....                 ..+.+......+.+++.+||+.+|.+|||+.||+++|+.+.+.
T Consensus       233 ~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          233 EKGE-----------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HTTC-----------------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HcCC-----------------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            1000                 0011122344678899999999999999999999999998764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.88  E-value=1.2e-22  Score=134.84  Aligned_cols=132  Identities=11%  Similarity=0.001  Sum_probs=91.8

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCcc-c
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT-N   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~-~   75 (153)
                      .+||+|||+++........     .......|++.|+|||.+.+..++.++|||||||+++++++|..||........ .
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence            4899999999987543221     122345789999999999988899999999999999999999999864322111 1


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ..           ............  .......+..+.+++.+||+.+|++|||+.+|++.|+++..+..
T Consensus       226 ~~-----------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          226 KY-----------ERISEKKMSTPI--EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HH-----------HHHHHHHHHSCH--HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             hh-----------hhhhcccccchh--hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            10           000000000000  00001124578899999999999999999999999999998763

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.88  E-value=1.2e-22  Score=135.72  Aligned_cols=134  Identities=22%  Similarity=0.347  Sum_probs=92.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++...............|++.|+|||.+.+ .++.++||||||++++++++|..||........ ...+..
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~  248 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE  248 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHH
Confidence            589999999987654332223344578999999998876 588899999999999999999999864332211 111111


Q ss_pred             h--hccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           82 E--SLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        82 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .  .....+...++....      ..+......+.+++.+||+.+|.+|||+.+|++.|+++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          249 EIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHTTSCCHHHHSCSSCS------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             Hhhhhhhhhhhhcccccc------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            1  001112222222221      1234566788999999999999999999999999998864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.88  E-value=1.7e-23  Score=142.93  Aligned_cols=135  Identities=9%  Similarity=0.025  Sum_probs=91.3

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+......     .......||+.|+|||.+.+..++.++|||||||+++++++|..||....... ..
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~  270 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KY  270 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HH
Confidence            5899999999876432111     11133459999999999998889999999999999999999999986422211 11


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...........+...++....        ....+..+.+++..||+.+|.+||++.+|++.|+.+..+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFP--------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSC--------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhhhHHHHHHHhcc--------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            111111111111111111100        0122457889999999999999999999999999998875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.88  E-value=7.3e-23  Score=136.09  Aligned_cols=133  Identities=11%  Similarity=0.012  Sum_probs=91.8

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++........     .......||+.|+|||.+.+..++.++||||||++++++++|..||........  
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--  226 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--  226 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--
Confidence            3899999999987643221     122345789999999999888899999999999999999999999864221111  


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ....        ..+.........  .......+..+.+++.+||+.+|.+|||+.+|++.|+++.++..
T Consensus       227 ~~~~--------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          227 KQKY--------ERIGEKKQSTPL--RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             HHHH--------HHHHHHHHHSCH--HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHH--------HHHHhhccCccH--HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            0000        000000000000  00001234578899999999999999999999999999988753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.88  E-value=4.7e-24  Score=141.82  Aligned_cols=140  Identities=21%  Similarity=0.324  Sum_probs=85.5

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......++..|+|||.+.+..++.++||||||++++++++|..|+......   .....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~  228 (295)
T 3ugc_A          152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMI  228 (295)
T ss_dssp             EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHH
T ss_pred             eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhh
Confidence            5899999999876543221 1223345777899999998888999999999999999999998886431100   00000


Q ss_pred             hhhccchh-hhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRL-TEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ........ .......+ ......+.+...+..+.+++.+||+.+|.+|||+.||++.|+++.+++
T Consensus       229 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          229 GNDKQGQMIVFHLIELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             CTTCCTHHHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             cCccccchhHHHHHHHH-hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            00000000 00000000 000111122334567889999999999999999999999999998765

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.88  E-value=1.5e-22  Score=134.42  Aligned_cols=131  Identities=11%  Similarity=0.025  Sum_probs=91.4

Q ss_pred             ceEecccccceeccCCCCCc-----ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc-cc
Q 043099            2 VAHVSDFGISKLLGEGDGSM-----TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK-TN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~   75 (153)
                      .+||+|||+++.........     ......|++.|+|||.+.+..++.++||||||++++++++|..||....... ..
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence            58999999999876433211     1234578999999999998889999999999999999999999986432211 11


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....           +..........  ......+..+.+++.+||+.+|.+|||+.+|++.|+++..+.
T Consensus       226 ~~~~-----------~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          226 KYER-----------ISEKKMSTPIE--VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHH-----------HHHHHHHSCHH--HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhhh-----------hcccccCCchH--HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            1100           00000000000  000123456889999999999999999999999999998875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.88  E-value=8.6e-24  Score=140.23  Aligned_cols=128  Identities=20%  Similarity=0.375  Sum_probs=77.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++...............|++.|+|||.+.   +..++.++||||+|++++++++|..||....... ....
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~  236 (289)
T 3og7_A          158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIE  236 (289)
T ss_dssp             EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHH
T ss_pred             CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHH
Confidence            57999999998764322222334457899999999876   4568889999999999999999999985422111 1111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ......       .......      .....+..+.+++.+||+.+|.+|||+.|+++.|+++.+
T Consensus       237 ~~~~~~-------~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          237 MVGRGS-------LSPDLSK------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHTS-------CCCCTTS------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             Hhcccc-------cCcchhh------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            111100       0000000      011234568899999999999999999999999998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=1.2e-22  Score=137.44  Aligned_cols=136  Identities=14%  Similarity=0.253  Sum_probs=89.7

Q ss_pred             ceEecccccceeccCCCCCc--ccccccccccccCcCccCCC------CccccccchhhhHHHHHHHhc----------C
Q 043099            2 VAHVSDFGISKLLGEGDGSM--TQTMTMATIGYMAPEYGSNG------IVSIKCDVYSYGVLLMEAFTK----------K   63 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~g----------~   63 (153)
                      .+||+|||+++.........  ......|++.|+|||.+.+.      .++.++||||||++++++++|          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            58999999998775433211  22345789999999988764      234689999999999999999          5


Q ss_pred             CCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           64 KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .||.................        .........+...........+.+++.+||+.+|.+|||+.||+++|+.+.+
T Consensus       265 ~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          265 LPYYDLVPSDPSVEEMRKVV--------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CTTTTTSCSSCCHHHHHHHH--------TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccccCcCcccHHHHHHHH--------HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            56543222222222111111        1111111000001123566788999999999999999999999999999987


Q ss_pred             Hh
Q 043099          144 KF  145 (153)
Q Consensus       144 ~~  145 (153)
                      +.
T Consensus       337 ~~  338 (342)
T 1b6c_B          337 QE  338 (342)
T ss_dssp             TT
T ss_pred             Hh
Confidence            64

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=1.7e-23  Score=143.82  Aligned_cols=126  Identities=25%  Similarity=0.351  Sum_probs=90.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..|+.....  .......
T Consensus       229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~~~~~~  306 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLL  306 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            589999999987654332233344567889999999988889999999999999999998 8888743111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ....            .     ...+......+.+++.+||+.+|.+|||+.||++.|+++.....
T Consensus       307 ~~~~------------~-----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          307 KEGH------------R-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             HTTC------------C-----CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HcCC------------C-----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            1000            0     00011234568889999999999999999999999999987653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=3.5e-23  Score=138.49  Aligned_cols=129  Identities=20%  Similarity=0.357  Sum_probs=88.7

Q ss_pred             ceEecccccceeccCCCCCc------------ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDGSM------------TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEM   69 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~------------~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~   69 (153)
                      .+||+|||+++.........            ......||+.|+|||.+.+..++.++||||||++++++++|..|+...
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            58999999998764322110            011457899999999999888999999999999999999999887542


Q ss_pred             CCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           70 FTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      ..........        .......         ..+...+..+.+++.+||+.||.+|||+.|+++.|+.++.....
T Consensus       226 ~~~~~~~~~~--------~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          226 LPRTMDFGLN--------VRGFLDR---------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             SCBCTTSSBC--------HHHHHHH---------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHhhh--------hhccccc---------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence            2211110000        0000000         00122334578899999999999999999999999999987654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.87  E-value=4.9e-24  Score=145.79  Aligned_cols=125  Identities=22%  Similarity=0.347  Sum_probs=88.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............||+.|+|||.+.+..++.++|||||||+++++++ |..||.....  .......
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i  299 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV  299 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            489999999986543222223344567899999999988889999999999999999998 8888753111  0111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .           .....      ..+...+..+.+++.+||+.+|.+|||+.||+++|+.+.+..
T Consensus       300 ~-----------~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          300 T-----------SGGRM------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             H-----------TTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             H-----------cCCCC------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            0           00000      011223346788999999999999999999999999998765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.87  E-value=1.8e-23  Score=139.91  Aligned_cols=126  Identities=18%  Similarity=0.324  Sum_probs=89.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..||...... .......
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~  261 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYKMI  261 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHHHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHHHHHh
Confidence            579999999988755433333344567889999999888789999999999999999998 88887532211 1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....        ..         ..+...+..+.+++.+||+.+|.+|||+.|+++.|+++..+.
T Consensus       262 ~~~~--------~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          262 KEGF--------RM---------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHTC--------CC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             ccCC--------CC---------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            1100        00         001123356788999999999999999999999999988764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.87  E-value=1.2e-23  Score=141.83  Aligned_cols=125  Identities=22%  Similarity=0.359  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||+||+++++++ |..||.....  .......
T Consensus       155 ~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~  232 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL  232 (327)
T ss_dssp             EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH
T ss_pred             CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHH
Confidence            479999999987754332223334456788999999988889999999999999999999 9999853211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....                 ..+.+......+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus       233 ~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          233 EKGE-----------------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HTTC-----------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HcCC-----------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            1000                 00111223346788999999999999999999999999998553

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.87  E-value=1.8e-23  Score=139.30  Aligned_cols=117  Identities=15%  Similarity=0.181  Sum_probs=82.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......|++.|+|||.+.+..++.++||||+||+++++++|..||....... .......
T Consensus       154 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~  230 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIAT  230 (297)
T ss_dssp             CEEECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHH
T ss_pred             CEEEeeCCCceecCCcc--cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Confidence            57999999998765432  22344579999999999988889999999999999999999999985321100 0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..                ......+......+.+++.+||+.||.+|||+.|++++
T Consensus       231 ~~----------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          231 NG----------------TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             HC----------------SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CC----------------CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            00                00011112234567889999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.87  E-value=1.7e-23  Score=141.26  Aligned_cols=128  Identities=20%  Similarity=0.334  Sum_probs=90.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..||....... ......
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~  280 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLV  280 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHHH
Confidence            579999999987654332333344567889999999888789999999999999999998 888875322111 111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      ....            .     ...+...+..+.+++.+||+.+|.+|||+.||++.|+++..+...
T Consensus       281 ~~~~------------~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  330 (333)
T 2i1m_A          281 KDGY------------Q-----MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR  330 (333)
T ss_dssp             HHTC------------C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             hcCC------------C-----CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence            1100            0     000111234678899999999999999999999999999877543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.87  E-value=9.5e-24  Score=142.19  Aligned_cols=125  Identities=21%  Similarity=0.345  Sum_probs=86.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............++..|+|||.+.+..++.++||||||++++++++ |..||.....  .......
T Consensus       153 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~  230 (325)
T 3kex_A          153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLL  230 (325)
T ss_dssp             CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHH
T ss_pred             eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHH
Confidence            579999999998754433333445567889999999988889999999999999999999 9999853211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....           .      ...+......+.+++.+||+.+|.+|||+.|++++|+.+....
T Consensus       231 ~~~~-----------~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          231 EKGE-----------R------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             HTTC-----------B------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             HcCC-----------C------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            1100           0      0001112235678999999999999999999999999987653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.87  E-value=2.4e-23  Score=139.47  Aligned_cols=126  Identities=22%  Similarity=0.337  Sum_probs=89.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............|++.|+|||.+.+..++.++||||+|++++++++ |..||........ .....
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~~  264 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL  264 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HHHHH
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HHHHh
Confidence            579999999987654433333445567889999999988889999999999999999998 9888753221111 11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .....                 ...+......+.+++.+||+.+|.+|||+.||+++|+.+.+..
T Consensus       265 ~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          265 KEGTR-----------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             HHTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccCcc-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            10000                 0001112346788999999999999999999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=3.6e-23  Score=136.98  Aligned_cols=119  Identities=24%  Similarity=0.359  Sum_probs=82.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC--CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS--NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~--~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....     ......|++.|+|||.+.  ...++.++||||+|++++++++|..||.............
T Consensus       167 ~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  241 (287)
T 4f0f_A          167 CAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM  241 (287)
T ss_dssp             CEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHH
T ss_pred             eEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHH
Confidence            389999999975432     233457899999999984  4457889999999999999999999985422221111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ...           ....     ...+...+..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus       242 ~~~-----------~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          242 IRE-----------EGLR-----PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHH-----------SCCC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             Hhc-----------cCCC-----CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            110           0000     001122345688999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.87  E-value=2e-23  Score=140.34  Aligned_cols=126  Identities=21%  Similarity=0.365  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||+++++++ |..||.....  ....   
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~---  249 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIY---  249 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHH---
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHH---
Confidence            589999999987654332222333456788999999988889999999999999999999 8888753211  1111   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                              .........      ..+......+.+++.+||+.||.+|||+.++++.|+++.+...
T Consensus       250 --------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          250 --------NYLIGGNRL------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             --------HHHHTTCCC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             --------HHHhcCCCC------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence                    111111000      0112233568899999999999999999999999999987753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.6e-23  Score=141.94  Aligned_cols=129  Identities=21%  Similarity=0.325  Sum_probs=88.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............|++.|+|||.+.+..++.++||||||++++++++ |..||....... ......
T Consensus       210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~  288 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA-NFYKLI  288 (344)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHH
T ss_pred             cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-HHHHHH
Confidence            589999999987654433333344567889999999888789999999999999999998 998975422111 111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                      ...            ..     ...+......+.+++.+||+.+|.+|||+.||+++|+.+......+
T Consensus       289 ~~~------------~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~  339 (344)
T 1rjb_A          289 QNG------------FK-----MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA  339 (344)
T ss_dssp             HTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred             hcC------------CC-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence            110            00     0011123456888999999999999999999999999988775543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.87  E-value=1.2e-23  Score=138.23  Aligned_cols=118  Identities=25%  Similarity=0.360  Sum_probs=77.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......    .....|++.|+|||.+.+..++.++||||+|++++++++|..||......    . .  
T Consensus       154 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~-~--  222 (271)
T 3dtc_A          154 ILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----A-V--  222 (271)
T ss_dssp             CEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----H-H--
T ss_pred             ceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----H-H--
Confidence            48999999998764322    22346899999999988878999999999999999999999998531110    0 0  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                            ..........     .+.+...+..+.+++.+||+.+|.+|||+.|++++|+++
T Consensus       223 ------~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          223 ------AYGVAMNKLA-----LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ------HHHHHTSCCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ------HHhhhcCCCC-----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence                  0000000000     001122345688899999999999999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.87  E-value=3.5e-23  Score=138.57  Aligned_cols=124  Identities=27%  Similarity=0.385  Sum_probs=88.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||+|++++++++ |..||.....  .......
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~  265 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLL  265 (314)
T ss_dssp             EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHh
Confidence            589999999987754332223334457888999999988789999999999999999999 9888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ....           .      ...+......+.+++.+||+.||.+|||+.|+++.|+++..+
T Consensus       266 ~~~~-----------~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          266 KTGH-----------R------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HTTC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hcCC-----------c------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            1000           0      001122345688899999999999999999999999998764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.87  E-value=2.6e-22  Score=135.38  Aligned_cols=131  Identities=12%  Similarity=0.049  Sum_probs=90.3

Q ss_pred             ceEecccccceeccCCCCCc-----ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSM-----TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+.......     ......||+.|+|||.+.+..++.++|||||||+++++++|..||......  ..
T Consensus       148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~  225 (330)
T 2izr_A          148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TL  225 (330)
T ss_dssp             SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SH
T ss_pred             eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cH
Confidence            38999999999865432211     123567999999999999888999999999999999999999998642211  11


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .....        .+.......... . .....+ .+.+++..||+.+|.+||++.+|++.|+++..+.
T Consensus       226 ~~~~~--------~i~~~~~~~~~~-~-~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          226 KERYQ--------KIGDTKRATPIE-V-LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHH--------HHHHHHHHSCHH-H-HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHH--------HHHhhhccCCHH-H-HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            11100        000000000000 0 001122 7889999999999999999999999999988775

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.87  E-value=5.3e-23  Score=139.59  Aligned_cols=133  Identities=10%  Similarity=0.060  Sum_probs=87.8

Q ss_pred             ceEecccccceeccCCCC-----CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-----~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+.....     ........|++.|+|||.+.+..++.++|||||||+++++++|..||..........
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  270 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV  270 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence            589999999987643211     111234578999999999988889999999999999999999999985322211111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .......     ...........    ......+..+.+++.+||+.+|++|||+.+|++.|+.+..
T Consensus       271 ~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          271 QTAKTNL-----LDELPQSVLKW----APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHH-----HHTTTHHHHHH----SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHHhh-----cccccHHHHhh----ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            1100000     00000000000    0001234578899999999999999999999999987654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.87  E-value=2.6e-23  Score=140.14  Aligned_cols=128  Identities=26%  Similarity=0.372  Sum_probs=86.8

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.....  ..... 
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~-  265 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVIS-  265 (325)
T ss_dssp             CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHH-
T ss_pred             CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHH-
Confidence            589999999998754321 112233346778999999988789999999999999999998 9999743111  00000 


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                                .+....      ..+.+...+..+.+++.+||+.+|.+|||+.||++.|+.+.+...+.
T Consensus       266 ----------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~  318 (325)
T 3kul_A          266 ----------SVEEGY------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL  318 (325)
T ss_dssp             ----------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred             ----------HHHcCC------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence                      000000      01111233456888999999999999999999999999998876443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.86  E-value=1.8e-22  Score=137.32  Aligned_cols=136  Identities=7%  Similarity=0.025  Sum_probs=90.8

Q ss_pred             ceEecccccceeccCCCC-----CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-----~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+.....     ........|++.|+|||.+.+..++.++||||||++++++++|..||..........
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  278 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI  278 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence            589999999987643211     111233478999999999988889999999999999999999999986432111111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ....... ........     ..   ..........+.+++.+||+.+|.+|||+.||++.|+++.....
T Consensus       279 ~~~~~~~-~~~~~~~~-----~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          279 MKQKQKF-VDKPGPFV-----GP---CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHH-HHSCCCEE-----CT---TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhc-cCChhhhh-----hh---ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            1110000 00000000     00   00001123568889999999999999999999999999988763

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.86  E-value=3.9e-23  Score=149.00  Aligned_cols=115  Identities=16%  Similarity=0.176  Sum_probs=81.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+....    ....+||+.|+|||++.. ..|+.++|+||+||++|+|++|..||.......  .....
T Consensus       330 ~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~  403 (689)
T 3v5w_A          330 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEID  403 (689)
T ss_dssp             CEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHH
T ss_pred             CEEecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence            58999999999875432    334589999999999864 579999999999999999999999985322111  00000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                              .......       ...+.....++.+|+.+||..||.+|++     +.||++|
T Consensus       404 --------~~i~~~~-------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          404 --------RMTLTMA-------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             --------HHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             --------HhhcCCC-------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence                    0000000       0111223456788999999999999998     6888775

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.86  E-value=3.2e-22  Score=133.80  Aligned_cols=123  Identities=25%  Similarity=0.343  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......     .....|++.|+|||.+.+..++.++||||||++++++++|..||...............
T Consensus       144 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  218 (307)
T 2eva_A          144 VLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH  218 (307)
T ss_dssp             EEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH
T ss_pred             EEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh
Confidence            3799999999765322     22346899999999998888999999999999999999999998532211110000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ..        ...         ......+..+.+++.+||+.+|.+|||+.|+++.|+.+.+...
T Consensus       219 ~~--------~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          219 NG--------TRP---------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             TT--------CCC---------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             cC--------CCC---------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            00        000         0011233467889999999999999999999999999987653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.86  E-value=4.6e-23  Score=138.48  Aligned_cols=143  Identities=22%  Similarity=0.298  Sum_probs=91.6

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......++..|+|||.+.+..++.++||||+|++++++++|..|+..............
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  251 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA  251 (318)
T ss_dssp             CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc
Confidence            5899999999987543321 122344678889999999888889999999999999999999988743111000000000


Q ss_pred             hhhc-cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 043099           81 SESL-PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDG  149 (153)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~  149 (153)
                      .... .......+...     ...+.+...+..+.+++.+||+.+|.+|||+.|+++.|+.+.+++.+..
T Consensus       252 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~  316 (318)
T 3lxp_A          252 QGQMTVLRLTELLERG-----ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA  316 (318)
T ss_dssp             CHHHHHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred             ccchhHHHHHHHHhcc-----cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence            0000 00001111000     0111123344678899999999999999999999999999999886543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.86  E-value=6.8e-23  Score=141.14  Aligned_cols=119  Identities=24%  Similarity=0.333  Sum_probs=77.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----------CCccccccchhhhHHHHHHHhcCCCCCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMF   70 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~   70 (153)
                      .+||+|||+++.+............+||+.|+|||++.+           ..++.++|||||||+++++++|..||....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            579999999987654332223345579999999998754           358889999999999999999999985321


Q ss_pred             CCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           71 TGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....            +..++.......     .+......+.+++.+||+.||.+|||+.||+++
T Consensus       272 ~~~~~------------~~~~~~~~~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          272 NQISK------------LHAIIDPNHEIE-----FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CHHHH------------HHHHHCTTSCCC-----CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHH------------HHHHhCccccCC-----CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            11011            111111111100     011113457889999999999999999999976

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.86  E-value=7.3e-23  Score=137.07  Aligned_cols=125  Identities=22%  Similarity=0.356  Sum_probs=81.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~  262 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYL  262 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHH
Confidence            589999999987654332222334457889999999988889999999999999999999 8788743211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                                 ......      ..+......+.+++.+||+.+|.+|||+.++++.|+++.++.
T Consensus       263 -----------~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          263 -----------LHGHRL------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             -----------HTTCCC------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----------HcCCCC------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence                       000000      011223356888999999999999999999999999998765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.1e-22  Score=134.76  Aligned_cols=131  Identities=24%  Similarity=0.364  Sum_probs=92.9

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++........ .......+++.|+|||.+.+..++.++||||+|++++++++ |..||.....  ......
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~  225 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAF  225 (287)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHH
T ss_pred             CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHH
Confidence            4799999999987543221 11223456889999999987789999999999999999998 9999753211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcCCC
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAA  151 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~~~  151 (153)
                      ....           ..      ...+...+..+.+++.+||+.+|.+||++.|++++|+.+......+.++
T Consensus       226 i~~~-----------~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~  280 (287)
T 1u59_A          226 IEQG-----------KR------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG  280 (287)
T ss_dssp             HHTT-----------CC------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HhcC-----------Cc------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccC
Confidence            1100           00      0011223457888999999999999999999999999999887666544

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.86  E-value=8.3e-22  Score=132.34  Aligned_cols=137  Identities=15%  Similarity=0.162  Sum_probs=89.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC--------CCCccccccchhhhHHHHHHHhcCCCCCccCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS--------NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~--------~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~   73 (153)
                      .+||+|||+++......   ......|++.|+|||++.        +..++.++|||||||+++++++|..||.......
T Consensus       154 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  230 (319)
T 4euu_A          154 VYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (319)
T ss_dssp             EEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred             eEEEccCCCceecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence            47999999998875432   223356899999999875        4578899999999999999999999986432221


Q ss_pred             cc---hHHhhhhhccchhhhhc---cccc---hhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           74 TN---LRNWVSESLPDRLTEVV---DTNL---VREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        74 ~~---~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ..   ............+....   ....   ................+.+++.+||+.||++|||+.|++++..+.
T Consensus       231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            11   11111111111111000   0000   000111122356677888999999999999999999999997754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.86  E-value=6.7e-23  Score=138.97  Aligned_cols=120  Identities=24%  Similarity=0.329  Sum_probs=76.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----------CCccccccchhhhHHHHHHHhcCCCCCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMF   70 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~   70 (153)
                      .+||+|||+++.+.............||+.|+|||++.+           ..++.++|||||||+++++++|..||....
T Consensus       145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            479999999987754332223345679999999998753           568889999999999999999999985321


Q ss_pred             CCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           71 TGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ......            ...+.......     .+......+.+++.+||+.||.+|||+.|++++-
T Consensus       225 ~~~~~~------------~~~~~~~~~~~-----~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          225 NQISKL------------HAIIDPNHEIE-----FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             SHHHHH------------HHHHCTTSCCC-----CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             hHHHHH------------HHHhcCCcccC-----CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence            110001            11111111000     0111224577899999999999999999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.86  E-value=3.6e-22  Score=140.70  Aligned_cols=132  Identities=11%  Similarity=0.058  Sum_probs=91.2

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++.+......     .......|++.|++||.+.+..++.++|||||||+++++++|..||........  
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--  221 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--  221 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--
Confidence            5899999999987643321     112255789999999999988899999999999999999999999864322111  


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...+.        .+..........  ......+.++.+++..||+.+|++||++.+|++.|+.+..+.
T Consensus       222 ~~~~~--------~i~~~~~~~~~~--~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          222 KQKYE--------KISEKKVATSIE--ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HHHHH--------HHHHHHHHSCHH--HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHH--------HHhhccccccHH--HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            00000        000000000000  000122457889999999999999999999999999997754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=7.7e-23  Score=135.13  Aligned_cols=124  Identities=21%  Similarity=0.337  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||+|++++++++ |..||......  ......
T Consensus       154 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i  230 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI  230 (281)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH
T ss_pred             CEEECccccccccCccc-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH
Confidence            47999999998764332 122233456788999999887789999999999999999996 88887532111  111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .           ....      .+.+...+..+.+++.+||+.+|.+|||+.|+++.|+++.++.
T Consensus       231 ~-----------~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          231 E-----------NGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             H-----------TTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             H-----------cCCC------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            1           0000      0011223456788999999999999999999999999998764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.86  E-value=1.1e-22  Score=142.51  Aligned_cols=120  Identities=25%  Similarity=0.361  Sum_probs=85.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....+++.|+|||.+.+..++.++||||||++++++++ |..||......  .....+
T Consensus       327 ~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i  399 (450)
T 1k9a_A          327 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV  399 (450)
T ss_dssp             CEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHH
T ss_pred             CEEEeeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH
Confidence            5899999999864321     122356888999999988889999999999999999998 99998532111  111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...            .     ....+..++..+.+++.+||+.+|.+|||+.|+++.|+.+....
T Consensus       400 ~~~------------~-----~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          400 EKG------------Y-----KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             HTT------------C-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HcC------------C-----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence            100            0     01112234567889999999999999999999999999998753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.86  E-value=1.1e-22  Score=134.28  Aligned_cols=124  Identities=19%  Similarity=0.267  Sum_probs=84.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.....  .......
T Consensus       151 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~  227 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDED-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVL  227 (281)
T ss_dssp             EEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHH
T ss_pred             cEEeCccCCCccccccc-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHH
Confidence            47999999998764332 122233456788999999987789999999999999999998 9999753111  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....           .      .+.+......+.+++.+||+.+|.+|||+.|+++.|+.+.+..
T Consensus       228 ~~~~-----------~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          228 EKGD-----------R------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             HHTC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcCC-----------C------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence            1000           0      0011123346788999999999999999999999999988754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.86  E-value=3e-23  Score=140.43  Aligned_cols=127  Identities=24%  Similarity=0.350  Sum_probs=86.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..||.....  .....  
T Consensus       212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~--  287 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--EEVIY--  287 (343)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHH--
T ss_pred             eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh--HHHHH--
Confidence            589999999987643222222334567889999999887789999999999999999998 8888743111  00110  


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                               .+.......      .+...+..+.+++.+||+.+|.+|||+.++++.|+++.++...
T Consensus       288 ---------~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          288 ---------YVRDGNILA------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             ---------HHHTTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             ---------HHhCCCcCC------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence                     111111100      1122345688899999999999999999999999999877643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2e-22  Score=133.93  Aligned_cols=129  Identities=20%  Similarity=0.313  Sum_probs=89.1

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.......  ........+++.|++||.+.+..++.++||||+|++++++++|..|+..... .......
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~  240 (298)
T 3pls_A          162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHF  240 (298)
T ss_dssp             CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHH
T ss_pred             cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHH
Confidence            589999999986543211  1122344678899999999888899999999999999999996665432111 1111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                      ......                 ...+......+.+++.+||+.+|.+|||+.|+++.|+++..++...
T Consensus       241 ~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          241 LAQGRR-----------------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             HHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             hhcCCC-----------------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence            111100                 0011122346788999999999999999999999999999887543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.86  E-value=5e-22  Score=136.70  Aligned_cols=131  Identities=14%  Similarity=0.103  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccc-----h
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN-----L   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~-----~   76 (153)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||+++++++|..||.........     +
T Consensus       234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~  308 (397)
T 1wak_A          234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI  308 (397)
T ss_dssp             CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred             ceEecccccccccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence            6899999999876432     23347899999999998888999999999999999999999998643322111     0


Q ss_pred             HHhhh--hhccchh-------hhhccc-------------cc-hhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 043099           77 RNWVS--ESLPDRL-------TEVVDT-------------NL-VREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTD  133 (153)
Q Consensus        77 ~~~~~--~~~~~~~-------~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  133 (153)
                      .....  ...+...       ......             .. .........+......+.+++.+||+.||++|||+.|
T Consensus       309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence            00000  0000000       000000             00 0000111223566778999999999999999999999


Q ss_pred             HHHH
Q 043099          134 AAAK  137 (153)
Q Consensus       134 vl~~  137 (153)
                      ++++
T Consensus       389 ~l~h  392 (397)
T 1wak_A          389 CLRH  392 (397)
T ss_dssp             HHTS
T ss_pred             HhhC
Confidence            9875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.86  E-value=1.7e-22  Score=138.34  Aligned_cols=128  Identities=9%  Similarity=0.039  Sum_probs=84.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.....     .....+++.|+|||.+.+  ..++.++|||||||+++++++|..||..........   
T Consensus       232 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~---  303 (371)
T 3q60_A          232 RLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS---  303 (371)
T ss_dssp             CEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC---
T ss_pred             CEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc---
Confidence            5899999999876321     213456799999999987  578999999999999999999999986532211100   


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHHh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIREKF  145 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~~~  145 (153)
                              ................+........+.+++.+||+.||++|||+.|++++  +..+....
T Consensus       304 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          304 --------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             --------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred             --------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence                    00000000000000111112234568889999999999999999999875  55655554

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.85  E-value=2.3e-22  Score=135.27  Aligned_cols=117  Identities=16%  Similarity=0.227  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......||+.|+|||.+.+..++.++||||||++++++++|..||.....  ........
T Consensus       179 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~  254 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLR  254 (321)
T ss_dssp             CEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred             cEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh
Confidence            58999999998765432  123345789999999999888899999999999999999999999853211  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..        .....       .........+.+++.+||+.||++|||+.|++++
T Consensus       255 ~~--------~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          255 DS--------PPPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HS--------SCCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cC--------CCCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00        00000       0111233467889999999999999999999986

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.85  E-value=6.7e-23  Score=134.49  Aligned_cols=124  Identities=23%  Similarity=0.324  Sum_probs=85.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||+|++++++++ |..||......  ...   
T Consensus       142 ~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~---  215 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVV---  215 (268)
T ss_dssp             CEEECCTTCEEECCTTC-EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHH---
T ss_pred             CEEEccCccceecchhh-hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHH---
Confidence            58999999998765432 112223346778999999988789999999999999999998 99887431110  000   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                              .........      ..+......+.+++.+||+.+|.+|||+.|+++.|+.++++.
T Consensus       216 --------~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          216 --------LKVSQGHRL------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             --------HHHHTTCCC------CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             --------HHHHcCCCC------CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence                    000000000      001112346788999999999999999999999999987653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=2.9e-22  Score=139.98  Aligned_cols=118  Identities=16%  Similarity=0.132  Sum_probs=82.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+||+++++++|..||.....  ......+.
T Consensus       151 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~  226 (444)
T 3soa_A          151 AVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIK  226 (444)
T ss_dssp             CEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred             cEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHH
Confidence            47999999998765432  122345799999999999888899999999999999999999999843111  11111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 ........   +........+.+++.+||+.||++|||+.|++++
T Consensus       227 -----------~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          227 -----------AGAYDFPS---PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             -----------HTCCCCCT---TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -----------hCCCCCCc---cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                       00000000   0011234567889999999999999999999986

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.85  E-value=1.5e-22  Score=136.72  Aligned_cols=125  Identities=24%  Similarity=0.368  Sum_probs=88.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||++++++++ |..|+.....  .......
T Consensus       195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~  272 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLL  272 (334)
T ss_dssp             CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HHHHHHH
Confidence            579999999987654332222333456788999999887789999999999999999998 8888743111  0011011


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ....        .         ...+......+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus       273 ~~~~--------~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          273 KEGH--------R---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHTC--------C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcCC--------C---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            0000        0         0011223356788999999999999999999999999998764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.85  E-value=6.7e-22  Score=135.83  Aligned_cols=62  Identities=24%  Similarity=0.275  Sum_probs=53.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||+++++++|..||..
T Consensus       199 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             CEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            4899999999886432     2335789999999999988899999999999999999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=4.5e-23  Score=144.53  Aligned_cols=123  Identities=23%  Similarity=0.407  Sum_probs=86.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+....++.++|||||||+++++++ |..||.....  ......+
T Consensus       322 ~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i  398 (454)
T 1qcf_A          322 VCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRAL  398 (454)
T ss_dssp             CEEECSTTGGGGBCCHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             cEEEeeCCCceEcCCCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            58999999998764321 111223346778999999987789999999999999999998 9999753111  0111011


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...                 ...+.+..++..+.+++.+||+.+|++|||+.+|+..|+.+...
T Consensus       399 ~~~-----------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          399 ERG-----------------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHT-----------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HcC-----------------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            000                 00111223445788999999999999999999999999988654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=7.1e-23  Score=140.91  Aligned_cols=135  Identities=22%  Similarity=0.197  Sum_probs=80.3

Q ss_pred             ceEecccccceeccCCC-------------------CCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHh
Q 043099            2 VAHVSDFGISKLLGEGD-------------------GSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFT   61 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~-------------------~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~   61 (153)
                      .+||+|||+|+.+....                   .....+..+||+.|+|||++.+ ..++.++||||+||+++++++
T Consensus       147 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  226 (388)
T 3oz6_A          147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC  226 (388)
T ss_dssp             CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence            58999999998764211                   0112234579999999998876 578999999999999999999


Q ss_pred             cCCCCCccCCCccchHHhhhhh---ccchhhhhcccc---------------chhhhhcch----------hhHHHHHHH
Q 043099           62 KKKPTNEMFTGKTNLRNWVSES---LPDRLTEVVDTN---------------LVREEQNFS----------AKLDCLLSI  113 (153)
Q Consensus        62 g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------~~~~~~~~~----------~~~~~~~~~  113 (153)
                      |..||..... ...+.......   ....+.......               .......++          ........+
T Consensus       227 g~~pf~~~~~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (388)
T 3oz6_A          227 GKPIFPGSST-MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA  305 (388)
T ss_dssp             SSCSCCCSSH-HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHH
T ss_pred             CCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHH
Confidence            9999854221 01111111000   000000000000               000000000          001224568


Q ss_pred             HHHHhhccccCCCCCCCHHHHHHH
Q 043099          114 MYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus       114 ~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .+++.+||..||.+|||+.|++++
T Consensus       306 ~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          306 LDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhhccCcccCCCHHHHhCC
Confidence            899999999999999999999987

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.85  E-value=1.2e-22  Score=136.79  Aligned_cols=137  Identities=23%  Similarity=0.374  Sum_probs=89.9

Q ss_pred             ceEecccccceeccCCCCCc-ccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSM-TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......... ......++..|+|||.+.+..++.++||||||++++++++|..|+.....   ......
T Consensus       183 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~  259 (326)
T 2w1i_A          183 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMI  259 (326)
T ss_dssp             EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHH
T ss_pred             cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhh
Confidence            57999999999875433211 12234567789999998887889999999999999999999887642100   000000


Q ss_pred             hhhccc-----hhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPD-----RLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ......     .+...+...     ...+.+...+..+.+++.+||+.+|.+|||+.||++.|+.+++++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          260 GNDKQGQMIVFHLIELLKNN-----GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             CTTCCTHHHHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhHHHHHHHhhcC-----CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            000000     000011000     0011122344678899999999999999999999999999998764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.85  E-value=3.9e-22  Score=134.54  Aligned_cols=123  Identities=17%  Similarity=0.181  Sum_probs=71.0

Q ss_pred             ceEecccccceeccCCCCCc----------ccccccccccccCcCcc---CCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSM----------TQTMTMATIGYMAPEYG---SNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~----------~~~~~~g~~~~~~pe~~---~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.........          ......|++.|+|||.+   .+..++.++||||||++++++++|..||..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            58999999998765322110          11134589999999988   455688999999999999999999999853


Q ss_pred             cCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           69 MFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ....                 ..........     ........+.+++.+||+.+|.+|||+.|++++|+.+.....
T Consensus       256 ~~~~-----------------~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          256 GAKL-----------------RIVNGKYSIP-----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             ---------------------------CCCC-----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             hhHH-----------------HhhcCcccCC-----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence            1110                 0000000000     001112246789999999999999999999999999987643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.85  E-value=2.1e-22  Score=145.58  Aligned_cols=127  Identities=24%  Similarity=0.388  Sum_probs=86.2

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++........ .......+++.|+|||++.+..++.++|||||||+++|+++ |..||.....  ......
T Consensus       474 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~  551 (613)
T 2ozo_A          474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAF  551 (613)
T ss_dssp             EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHH
T ss_pred             cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHH
Confidence            5899999999876433211 11223345688999999988889999999999999999998 9999853211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      +...           .      ....+..++..+.+++.+||+.+|.+||++.+|++.|+.+......
T Consensus       552 i~~~-----------~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          552 IEQG-----------K------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             HHTT-----------C------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             HHcC-----------C------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence            1100           0      0111223456788999999999999999999999999999877643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.5e-22  Score=138.76  Aligned_cols=128  Identities=21%  Similarity=0.326  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.......  ........+++.|+|||.+.+..++.++||||||++++++++ |..|+.....  .....
T Consensus       230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~  307 (373)
T 3c1x_A          230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITV  307 (373)
T ss_dssp             CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHH
T ss_pred             CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHH
Confidence            589999999987643221  112233457788999999988889999999999999999999 5666643211  11111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                      ......           ..      ..+...+..+.+++.+||+.+|++|||+.|+++.|+.+...+...
T Consensus       308 ~~~~~~-----------~~------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~  360 (373)
T 3c1x_A          308 YLLQGR-----------RL------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  360 (373)
T ss_dssp             HHHTTC-----------CC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             HHHcCC-----------CC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence            111100           00      001123346888999999999999999999999999999876543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.85  E-value=1.6e-22  Score=138.58  Aligned_cols=125  Identities=26%  Similarity=0.410  Sum_probs=76.4

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.....  ......
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~  262 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKA  262 (373)
T ss_dssp             CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHH
T ss_pred             CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Confidence            589999999987654321 111222345678999999988889999999999999999997 9999743211  001000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                                  +.....     .+.+...+..+.+++.+||+.+|.+||++.||++.|+.+....
T Consensus       263 ------------i~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          263 ------------VDEGYR-----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             ------------HHTTEE-----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             ------------HHcCCC-----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence                        000000     0111233456889999999999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.85  E-value=2.9e-22  Score=134.04  Aligned_cols=130  Identities=18%  Similarity=0.194  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||||++++++++|..||......   ......
T Consensus       174 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~  248 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCK  248 (310)
T ss_dssp             CEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHH
T ss_pred             CEEEEeccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHH
Confidence            47999999998764322  1223346899999999998888999999999999999999999997432111   111110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDG  149 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~  149 (153)
                      .        +........     ........+.+++.+||+.||.+|||+.||++.|+++.....+..
T Consensus       249 ~--------~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~  303 (310)
T 2wqm_A          249 K--------IEQCDYPPL-----PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL  303 (310)
T ss_dssp             H--------HHTTCSCCC-----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred             H--------hhcccCCCC-----cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence            0        000000000     001223467889999999999999999999999999998865543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=8.7e-23  Score=134.06  Aligned_cols=123  Identities=26%  Similarity=0.350  Sum_probs=85.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||+|++++++++ |..||.....  .......
T Consensus       144 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~~~~~~~  220 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDI  220 (269)
T ss_dssp             CEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH
T ss_pred             CEEeccccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHH
Confidence            47999999998764321 112223356778999999987789999999999999999999 8888753111  0000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .           .. ..     ...+......+.+++.+||+.+|.+|||+.|++++|+++.+.
T Consensus       221 ~-----------~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          221 S-----------TG-FR-----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             H-----------TT-CC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             h-----------cC-cc-----CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            0           00 00     000111234578899999999999999999999999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=1.7e-22  Score=134.55  Aligned_cols=136  Identities=18%  Similarity=0.293  Sum_probs=87.1

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......|+..|+|||.+.+..++.++||||+|++++++++|..|+......   .....
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~  240 (302)
T 4e5w_A          164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMI  240 (302)
T ss_dssp             EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHH
T ss_pred             CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---Hhhcc
Confidence            4799999999987543321 2233456788899999998888899999999999999999998875321100   00000


Q ss_pred             hhhccc-hhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           81 SESLPD-RLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                      ...... ...... ... ......+.+...+..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus       241 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          241 GPTHGQMTVTRLV-NTL-KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CSCCGGGHHHHHH-HHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccccCHHHHH-HHH-hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            000000 000000 000 000011112234467889999999999999999999999999875

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.85  E-value=1.7e-21  Score=134.58  Aligned_cols=121  Identities=17%  Similarity=0.188  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCcc--chHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT--NLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~--~~~~~   79 (153)
                      .+||+|||+++......   .....+||+.|+|||++.+..++.++|||||||+++++++|..||........  .....
T Consensus       202 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  278 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR  278 (400)
T ss_dssp             CEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH
T ss_pred             cEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH
Confidence            58999999998764322   23345789999999999888899999999999999999999999854322110  11111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      +...           .....   .+........+.+++.+||+.||.+|||+.|++++-.
T Consensus       279 i~~~-----------~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~  324 (400)
T 1nxk_A          279 IRMG-----------QYEFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW  324 (400)
T ss_dssp             HHHT-----------CCCCC---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             HHcC-----------cccCC---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            1100           00000   0001123456788999999999999999999998743

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.85  E-value=1.2e-22  Score=143.72  Aligned_cols=123  Identities=22%  Similarity=0.339  Sum_probs=86.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++|||||||+++++++ |..|+.....  ......+
T Consensus       356 ~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~  432 (495)
T 1opk_A          356 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELL  432 (495)
T ss_dssp             CEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH
T ss_pred             cEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            58999999999765332 222233456788999999988789999999999999999998 8888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .            ....     ...+..++..+.+++.+||+.+|.+|||+.||++.|+.+...
T Consensus       433 ~------------~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          433 E------------KDYR-----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             H------------TTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             H------------cCCC-----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            1            0000     111223445688899999999999999999999999987543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.85  E-value=3.7e-22  Score=136.22  Aligned_cols=117  Identities=15%  Similarity=0.177  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+||+++++++|..||.....  .   ..  
T Consensus       157 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~---~~--  226 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--Q---ET--  226 (361)
T ss_dssp             CEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--H---HH--
T ss_pred             CEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--H---HH--
Confidence            58999999998865432   23345799999999999888899999999999999999999999853111  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.........   .........+.+++.+||..||.+|||+.|++++
T Consensus       227 ------~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          227 ------LANITAVSYDFDE---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             ------HHHHHTTCCCCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHhcCCCCCc---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  0111111000000   0011233567889999999999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.85  E-value=3e-22  Score=134.97  Aligned_cols=117  Identities=17%  Similarity=0.228  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       156 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~--  225 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QET--  225 (326)
T ss_dssp             CEEECCCTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHH--
T ss_pred             CEEEEECCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHH--
Confidence            58999999998865332   22335689999999999888899999999999999999999999843111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.........   .........+.+++.+||+.||.+|||+.|++++
T Consensus       226 ------~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          226 ------LANVSAVNYEFED---EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             ------HHHHHHTCCCCCH---HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ------HHHHHhcCCCcCc---cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                  0000000000000   0011223467889999999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=1.8e-22  Score=146.42  Aligned_cols=126  Identities=26%  Similarity=0.352  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.+...... .......+++.|+|||++.+..++.++|||||||+++++++ |..||.....  ......
T Consensus       507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~  584 (635)
T 4fl3_A          507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM  584 (635)
T ss_dssp             EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH
T ss_pred             CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH
Confidence            5899999999876543221 22233456788999999988889999999999999999998 9999853211  011111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      +..           ..      ....+...+..+.+++.+||+.||++||++.+|++.|+.+.....
T Consensus       585 i~~-----------~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          585 LEK-----------GE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             HHT-----------TC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             HHc-----------CC------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            110           00      001112344678899999999999999999999999999887653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.85  E-value=1.4e-22  Score=136.48  Aligned_cols=126  Identities=21%  Similarity=0.332  Sum_probs=86.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............|++.|+|||.+.+..++.++||||||++++++++ |..||.....  .......
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~  258 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV  258 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHH
Confidence            489999999986544332223334567889999999887789999999999999999998 8888743111  0011111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ..           .....      .+......+.+++.+||+.+|.+|||+.||+++|+.+.....
T Consensus       259 ~~-----------~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          259 TS-----------GGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             HT-----------TCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             hc-----------CCCCC------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence            00           00000      011233467889999999999999999999999999887653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.85  E-value=3.3e-22  Score=135.28  Aligned_cols=114  Identities=19%  Similarity=0.296  Sum_probs=80.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   .....+||+.|+|||.+.+..+ +.++||||+||+++++++|..||.......       
T Consensus       146 ~~kl~DFG~s~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-------  215 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-------  215 (336)
T ss_dssp             CEEECCSSCTBTTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-------
T ss_pred             CEEEEEeccceeccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-------
Confidence            58999999998764332   2334578999999999988765 688999999999999999999985421110       


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                            ....+....       ...+......+.+++.+||+.||.+|||+.|++++-
T Consensus       216 ------~~~~i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  260 (336)
T 3h4j_B          216 ------LFKKVNSCV-------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP  260 (336)
T ss_dssp             ------CBCCCCSSC-------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred             ------HHHHHHcCC-------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence                  000000000       001122334678899999999999999999998863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=2.6e-22  Score=135.05  Aligned_cols=118  Identities=18%  Similarity=0.300  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||++.+..++.++||||+|++++++++|..||.....  ...     
T Consensus       142 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~-----  211 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQI-----  211 (321)
T ss_dssp             CEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHH-----
T ss_pred             CEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHH-----
Confidence            57999999998875432   23445789999999999888889999999999999999999999853111  000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                            ...+.........   .........+.+++.+||..||.+|||+.|++++-
T Consensus       212 ------~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          212 ------IENIMNAEYTFDE---EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             ------HHHHHHTCCCCCH---HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             ------HHHHHcCCCCCCh---hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence                  0111111000000   00112345688999999999999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.85  E-value=3.3e-22  Score=133.11  Aligned_cols=116  Identities=23%  Similarity=0.263  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..   ++.++|||||||+++++++|..||.....  .....
T Consensus       175 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~  250 (298)
T 2zv2_A          175 HIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--MCLHS  250 (298)
T ss_dssp             CEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH
T ss_pred             CEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--HHHHH
Confidence            57999999998765332  1233457899999999987654   46789999999999999999999853211  00000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...           ....     ..+........+.+++.+||+.||.+|||+.|++++
T Consensus       251 ~~~-----------~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          251 KIK-----------SQAL-----EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHH-----------HCCC-----CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHh-----------cccC-----CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            000           0000     000011233467889999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.84  E-value=3.8e-22  Score=132.08  Aligned_cols=124  Identities=22%  Similarity=0.327  Sum_probs=88.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++....... ........+++.|+|||.+.+..++.++||||+|++++++++ |..|+.....  .......
T Consensus       149 ~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~  225 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELL  225 (288)
T ss_dssp             CEEECCCCGGGTSCSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH
T ss_pred             CEEEccCccceeccCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            47999999998765432 223334457788999999988789999999999999999999 8888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...            ..     ...+...+..+.+++.+||+.+|.+|||+.|+++.|+.+..+.
T Consensus       226 ~~~------------~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          226 EKD------------YR-----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             HTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcc------------CC-----CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence            100            00     0011223456889999999999999999999999999988764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.84  E-value=7.1e-22  Score=133.02  Aligned_cols=119  Identities=18%  Similarity=0.275  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+.............|++.|+|||++.+..+ +.++||||+||+++++++|..||............+.
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  222 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (323)
T ss_dssp             CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred             CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence            479999999987643322223345679999999999877664 7789999999999999999999854322211111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....            .     ..........+.+++.+||+.||.+|||+.|++++
T Consensus       223 ~~~~------------~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          223 EKKT------------Y-----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             TTCT------------T-----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccc------------c-----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            1000            0     00011223456789999999999999999999876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=2.2e-22  Score=135.72  Aligned_cols=113  Identities=19%  Similarity=0.195  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCcc-ccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVS-IKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   .....+||+.|+|||.+.+..+. .++||||+||+++++++|..||....     .... 
T Consensus       152 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~-  222 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKEL-  222 (328)
T ss_dssp             CEEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHH-
T ss_pred             CEEEeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHH-
Confidence            58999999998764332   23455799999999998877664 78999999999999999999985311     0000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ...+.....       ..+......+.+++.+||+.||.+|||+.|++++
T Consensus       223 -------~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          223 -------RERVLRGKY-------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             -------HHHHHHCCC-------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             -------HHHHHhCCC-------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                   011111110       0111233467789999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.84  E-value=5.4e-22  Score=135.22  Aligned_cols=62  Identities=24%  Similarity=0.289  Sum_probs=53.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++||||+||+++++++|..||..
T Consensus       200 ~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          200 GIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             CEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            4799999999875432     2345789999999999988999999999999999999999999854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=3.7e-22  Score=136.30  Aligned_cols=117  Identities=17%  Similarity=0.162  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+||+++++++|..||.....  ..+...+.
T Consensus       169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~  243 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIK  243 (362)
T ss_dssp             CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred             CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence            48999999998765332   22345789999999999888899999999999999999999999853111  11111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..           .....   .+........+.+++.+||+.||.+|||+.|++++
T Consensus       244 ~~-----------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          244 AG-----------AYDYP---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HT-----------CCCCC---TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hC-----------CCCCC---cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00           00000   00011234567889999999999999999999876

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.84  E-value=1e-21  Score=131.61  Aligned_cols=111  Identities=18%  Similarity=0.192  Sum_probs=76.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+ .++.++|||||||+++++++|..++...    ..      
T Consensus       195 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~------  260 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EG------  260 (311)
T ss_dssp             CEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HH------
T ss_pred             CEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cH------
Confidence            58999999998764322   2334468999999998876 7899999999999999999997664320    00      


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ............     .+......+.+++.+||+.+|++|||+.|++++
T Consensus       261 ------~~~~~~~~~~~~-----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          261 ------WQQLRQGYLPPE-----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             ------HHHHTTTCCCHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHhccCCCcc-----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence                  011111111000     111234568899999999999999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.84  E-value=1.7e-22  Score=141.49  Aligned_cols=123  Identities=27%  Similarity=0.409  Sum_probs=81.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||||++++++++ |..|+.....  ......+
T Consensus       318 ~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i  394 (452)
T 1fmk_A          318 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV  394 (452)
T ss_dssp             CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH
T ss_pred             CEEECCCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            58999999998765332 112233456788999999888789999999999999999999 8888753111  0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .           ..      ...+.+...+..+.+++.+||+.+|++|||+.+|++.|+.+...
T Consensus       395 ~-----------~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          395 E-----------RG------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             H-----------TT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             H-----------cC------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            0           00      00111223445788999999999999999999999999988654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.84  E-value=1.5e-21  Score=137.15  Aligned_cols=132  Identities=17%  Similarity=0.125  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   .....+||+.|+|||++.+..++.++||||+||+++++++|..||...... ..+...+.
T Consensus       202 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~  277 (464)
T 3ttj_A          202 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIE  277 (464)
T ss_dssp             CEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred             CEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            58999999998764322   234467899999999999889999999999999999999999998532210 01111110


Q ss_pred             h---hccc-------hhhhhccccc--h--hhh---------hcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 E---SLPD-------RLTEVVDTNL--V--REE---------QNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~---~~~~-------~~~~~~~~~~--~--~~~---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ..+.       .....+....  .  ...         ............+.+|+.+||..||++|||++|++++
T Consensus       278 ~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0   0000       0000000000  0  000         0000112235678999999999999999999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.84  E-value=2e-22  Score=133.20  Aligned_cols=123  Identities=17%  Similarity=0.300  Sum_probs=85.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||+|++++++++ |..||......  ......
T Consensus       158 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~  234 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHI  234 (283)
T ss_dssp             CEEECSTTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHH
T ss_pred             CEEEccccccccccccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHH
Confidence            58999999998764321 111223346778999999988789999999999999999998 99997532110  000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...        .    ..     ..+......+.+++.+||+.+|.+|||+.|++++|+.+..+
T Consensus       235 ~~~--------~----~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          235 AQG--------L----RL-----YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HTT--------C----CC-----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcc--------c----CC-----CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            000        0    00     00111234678899999999999999999999999998765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.84  E-value=2.1e-22  Score=133.48  Aligned_cols=125  Identities=21%  Similarity=0.337  Sum_probs=83.8

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++........ .......+++.|+|||.+.+..++.++||||||++++++++ |..||.....     ...
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~  233 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQI  233 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHH
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHH
Confidence            4799999999887543221 12233457788999999988788999999999999999999 9999753211     000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .        ........     ..+.+...+..+.+++.+||+.+|.+|||+.++++.|+++...
T Consensus       234 ~--------~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          234 L--------HKIDKEGE-----RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             H--------HHHHTSCC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             H--------HHHHccCC-----CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            0        00000000     0011122345688899999999999999999999999988764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.84  E-value=4.5e-22  Score=132.03  Aligned_cols=125  Identities=26%  Similarity=0.342  Sum_probs=87.1

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++........ .......+++.|+|||.+.+..++.++||||||++++++++ |..||.....  ......
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~  232 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM  232 (291)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH
T ss_pred             cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHH
Confidence            4799999999887543321 11223346788999999988788999999999999999998 9999753211  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .....        .         ...+...+..+.+++.+||+.||.+|||+.+|++.|+++....
T Consensus       233 ~~~~~--------~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          233 LEKGE--------R---------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             HHTTC--------C---------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHcCC--------C---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            11000        0         0011223456888999999999999999999999999998875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.84  E-value=1e-21  Score=131.29  Aligned_cols=132  Identities=20%  Similarity=0.173  Sum_probs=83.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||.+.+..++.++||||+||+++++++|..||...... ........
T Consensus       158 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~  233 (308)
T 3g33_A          158 TVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFD  233 (308)
T ss_dssp             CEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHH
T ss_pred             CEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            58999999998764322   234457899999999998888999999999999999999999998532211 11111111


Q ss_pred             hh---ccchhhhhcc---ccchhhh--hcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ES---LPDRLTEVVD---TNLVREE--QNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~---~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ....+.....   .......  .......+....+.+++.+||+.||++|||+.|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            00   0000000000   0000000  0000011234567889999999999999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=7.1e-22  Score=133.47  Aligned_cols=127  Identities=25%  Similarity=0.383  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.....  ......
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~  262 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKA  262 (333)
T ss_dssp             CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHH
T ss_pred             cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHH
Confidence            589999999987653321 112223346788999999988889999999999999999998 9999743111  001000


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                                 +....      ..+.+...+..+.+++.+||+.+|.+||++.|+++.|+++......
T Consensus       263 -----------~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          263 -----------INDGF------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             -----------HHTTC------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             -----------HHCCC------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence                       00000      0011122345678899999999999999999999999999876543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=1.1e-21  Score=132.92  Aligned_cols=120  Identities=21%  Similarity=0.177  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++.+.....  ........|++.|+|||.+.+  ..++.++|||||||+++++++|..||...... .   
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~---  283 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-D---  283 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H---
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-H---
Confidence            689999999987643211  112344578999999998865  56889999999999999999999998532111 0   


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ..............   +........+.+++.+||+.+|.+|||+.|++++
T Consensus       284 ---------~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h  331 (345)
T 3hko_A          284 ---------TISQVLNKKLCFEN---PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH  331 (345)
T ss_dssp             ---------HHHHHHHCCCCTTS---GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred             ---------HHHHHHhcccccCC---cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                     01111111111000   0011234567889999999999999999999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=7.8e-22  Score=135.16  Aligned_cols=117  Identities=17%  Similarity=0.214  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||+++++++|..||...... ..+.    
T Consensus       227 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~----  298 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLN----  298 (373)
T ss_dssp             EEEECCCSSCEECCTTC---BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHH----
T ss_pred             cEEEEeCCCceecCCcc---ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH----
Confidence            58999999999875432   223346899999999998888999999999999999999999998532110 0011    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              .+.........   .........+.+++.+||+.+|.+|||+.|++++
T Consensus       299 --------~i~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          299 --------NILACRWDLED---EEFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             --------HHHHTCCCSCS---GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --------HHHhccCCCCh---hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                    11100000000   0011234568889999999999999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.84  E-value=4.4e-22  Score=136.95  Aligned_cols=117  Identities=19%  Similarity=0.196  Sum_probs=81.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+||+++++++|..||.....  .   ... 
T Consensus       189 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~---~~~-  259 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--L---ETL-  259 (387)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--H---HHH-
T ss_pred             ceEEEecccceecCCCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--H---HHH-
Confidence            48999999999875432   22334789999999999888899999999999999999999999853211  0   000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   ..........+.+++.+||+.||.+|||+.|++++
T Consensus       260 -------~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          260 -------QNVKRCDWEFD---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             -------HHHHHCCCCCC---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             -------HHHHhCCCCCC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                   00000000000   00011234567899999999999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.84  E-value=1.7e-21  Score=130.55  Aligned_cols=133  Identities=20%  Similarity=0.222  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+ ..++.++||||+||+++++++|..||....... .+....
T Consensus       157 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~  233 (311)
T 3niz_A          157 ALKLADFGLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIF  233 (311)
T ss_dssp             CEEECCCTTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHH
T ss_pred             CEEEccCcCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            57999999998865332  12334578999999998876 468999999999999999999999986433221 111111


Q ss_pred             h---hhccchhhhhccc------cc--hhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVDT------NL--VREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ...+..+......      ..  ...............++.+++.+||+.||++|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            1   1111111110000      00  00000000011223567899999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.84  E-value=5.8e-22  Score=133.54  Aligned_cols=133  Identities=12%  Similarity=0.133  Sum_probs=83.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......|+..|+|||.+.+ ..++.++||||+||+++++++|..||.........+....
T Consensus       169 ~~kl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~  245 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  245 (330)
T ss_dssp             EEEECCCTTCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             EEEEEeCCCceEcCCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Confidence            58999999998765432   2234478999999999876 5689999999999999999999999853222211111111


Q ss_pred             hhhccchhh---------------hhccccch---hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLT---------------EVVDTNLV---REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~---------------~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .........               ........   ...............+.+++.+||+.||.+|||++|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            100000000               00000000   0000000111234578899999999999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.84  E-value=4.6e-22  Score=135.20  Aligned_cols=118  Identities=18%  Similarity=0.193  Sum_probs=73.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++|||||||+++++++|..||............   
T Consensus       189 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---  262 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR---  262 (349)
T ss_dssp             CEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH---
T ss_pred             CEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH---
Confidence            58999999998764321   223457899999999998888999999999999999999999998532211111111   


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               +........   .+........+.+++.+||+.||++|||+.|++++
T Consensus       263 ---------i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          263 ---------ILNCEYYFI---SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             ---------HHTTCCCCC---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ---------HHhCCCccC---CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                     111000000   00012234567889999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.84  E-value=5e-22  Score=131.20  Aligned_cols=121  Identities=20%  Similarity=0.225  Sum_probs=84.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++||||||++++++++|..|+...       .... 
T Consensus       160 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~-  228 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFF-  228 (284)
T ss_dssp             EEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHH-
T ss_pred             CEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHH-
Confidence            57999999998865432   223346899999999998888999999999999999999998775210       0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcC
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDG  149 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~  149 (153)
                             .......+.         ......+.+++.+||+.||.+|||+.|++++|+.+......+.
T Consensus       229 -------~~~~~~~~~---------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~  280 (284)
T 2a19_B          229 -------TDLRDGIIS---------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE  280 (284)
T ss_dssp             -------HHHHTTCCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC------
T ss_pred             -------HHhhccccc---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccc
Confidence                   000000000         1122356789999999999999999999999999987765443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.84  E-value=1.9e-21  Score=132.95  Aligned_cols=131  Identities=16%  Similarity=0.125  Sum_probs=83.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCcc-----ch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT-----NL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~-----~~   76 (153)
                      .+||+|||+++.....     .....||+.|+|||.+.+..++.++|||||||+++++++|..||........     .+
T Consensus       176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            5899999999876432     2234689999999999888899999999999999999999999864322110     00


Q ss_pred             HHhhhh--hccch-----------------hhhhcccc---chh-hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHH
Q 043099           77 RNWVSE--SLPDR-----------------LTEVVDTN---LVR-EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTD  133 (153)
Q Consensus        77 ~~~~~~--~~~~~-----------------~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~e  133 (153)
                      ......  ..+..                 ........   ... .......+......+.+++.+||+.||.+|||+.|
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            000000  00000                 00000000   000 01112233566778999999999999999999999


Q ss_pred             HHHH
Q 043099          134 AAAK  137 (153)
Q Consensus       134 vl~~  137 (153)
                      |+++
T Consensus       331 ll~h  334 (373)
T 1q8y_A          331 LVNH  334 (373)
T ss_dssp             HHTC
T ss_pred             HhhC
Confidence            9985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.84  E-value=2.6e-22  Score=134.85  Aligned_cols=124  Identities=22%  Similarity=0.349  Sum_probs=86.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||+|++++++++ |..|+.....  ....   
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~---  250 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL---  250 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHH---
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHH---
Confidence            589999999987643322222334467889999999888789999999999999999999 7888743111  0010   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                              ..+.......      .+...+..+.+++.+||+.+|.+|||+.|++++|+++...
T Consensus       251 --------~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          251 --------RFVMEGGLLD------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             --------HHHHTTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             --------HHHHcCCcCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence                    0011111000      1122345678899999999999999999999999887554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.84  E-value=2.8e-21  Score=134.23  Aligned_cols=118  Identities=23%  Similarity=0.292  Sum_probs=75.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++......   ......||+.|+|||++.+   ..++.++||||+||+++++++|..||....... .+..
T Consensus       280 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~  355 (419)
T 3i6u_A          280 LIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKD  355 (419)
T ss_dssp             CEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHH
T ss_pred             eEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHH
Confidence            48999999998764322   2334578999999999853   468889999999999999999999986422211 1111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .........         ...     ........+.+++.+||+.||.+|||+.|++++
T Consensus       356 ~i~~~~~~~---------~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          356 QITSGKYNF---------IPE-----VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHHTTCCCC---------CHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHhcCCCCC---------Cch-----hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            111111000         000     001234567889999999999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.84  E-value=2e-21  Score=129.28  Aligned_cols=127  Identities=20%  Similarity=0.326  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcC-CCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK-KPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.......  ........+++.|+|||.+.+..++.++||||+|++++++++|. .|+.. .... ....
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-~~~~-~~~~  243 (298)
T 3f66_A          166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VNTF-DITV  243 (298)
T ss_dssp             CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-SCTT-THHH
T ss_pred             CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc-CCHH-HHHH
Confidence            589999999987643221  11223446788899999998888999999999999999999955 44432 1111 1111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      ......           ...      .+...+..+.+++.+||+.+|.+|||+.|+++.|+++...+..
T Consensus       244 ~~~~~~-----------~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~  295 (298)
T 3f66_A          244 YLLQGR-----------RLL------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  295 (298)
T ss_dssp             HHHTTC-----------CCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred             HHhcCC-----------CCC------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            111000           000      0111234678899999999999999999999999999887654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.84  E-value=3e-22  Score=134.91  Aligned_cols=141  Identities=26%  Similarity=0.323  Sum_probs=87.0

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++........ .......|++.|+|||.+.+..++.++||||+|++++++++|..|+......  ......
T Consensus       165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~--~~~~~~  242 (327)
T 3lxl_A          165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMMG  242 (327)
T ss_dssp             EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH--HHHHCC
T ss_pred             CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch--hhhhcc
Confidence            4799999999987543321 1223346788899999998878899999999999999999999886421110  000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      .............. + ......+.+......+.+++.+||+.+|.+|||+.||+++|+.+.....
T Consensus       243 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          243 CERDVPALSRLLEL-L-EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             ----CCHHHHHHHH-H-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             cccccccHHHHHHH-h-hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            00000000000000 0 0000011123345678899999999999999999999999999987653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.84  E-value=9.6e-22  Score=130.53  Aligned_cols=134  Identities=14%  Similarity=0.109  Sum_probs=82.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......||+.|+|||.+.+.. ++.++||||+||+++++++|..|+.........+....
T Consensus       139 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~  216 (292)
T 3o0g_A          139 ELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             CEEEeecccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence            57999999998765332  1233457899999999987765 89999999999999999998888643222111122111


Q ss_pred             hhhc---cchhhhhcc---cc----chhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEVVD---TN----LVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+.....   ..    .................+.+++.+||+.||++|||++|++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1100   000000000   00    000000000112234567889999999999999999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.84  E-value=9.5e-22  Score=129.95  Aligned_cols=117  Identities=17%  Similarity=0.162  Sum_probs=81.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+..++.++||||+|++++++++|..||.....  ........
T Consensus       146 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~  220 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIK  220 (284)
T ss_dssp             CEEECCCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred             cEEEeeceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHH
Confidence            48999999998765332   22345789999999999888899999999999999999999999843111  00110000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..           .....   .+........+.+++.+||+.+|++|||+.|++++
T Consensus       221 ~~-----------~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          221 AG-----------AYDYP---SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             HT-----------CCCCC---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hc-----------cccCC---chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            00           00000   00001233467889999999999999999999986

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.83  E-value=1.1e-21  Score=133.38  Aligned_cols=117  Identities=21%  Similarity=0.232  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+||+++++++|..||....   ...     
T Consensus       171 ~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~-----  240 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERL-----  240 (351)
T ss_dssp             CEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHH-----
T ss_pred             cEEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHH-----
Confidence            48999999998875432  12334579999999999988889999999999999999999999985311   000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.........   .........+.+++.+||+.||++|||+.|++++
T Consensus       241 ------~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          241 ------FEGIIKGKYKMNP---RQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             ------HHHHHHTCCCCCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHcCCCCCCc---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  0111111000000   0001234567889999999999999999999875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.83  E-value=2.5e-21  Score=135.02  Aligned_cols=121  Identities=19%  Similarity=0.266  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCc--ccccccccccccCcCccCC-------CCccccccchhhhHHHHHHHh-cCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM--TQTMTMATIGYMAPEYGSN-------GIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~--~~~~~~g~~~~~~pe~~~~-------~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~   71 (153)
                      .+||+|||+++.........  ......||+.|+|||++.+       ..++.++|||||||+++++++ |..||.....
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            58999999999875432211  1234579999999998865       468899999999999999998 8889753211


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .......        ...    ..............+.+++.+||+.||.+|||+.||+++
T Consensus       246 ~~---~~i~~~~--------~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          246 RE---SNIIRGI--------FSL----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             HH---HHHHHTC--------CCC----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hH---HHHhcCC--------CCc----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            10   1111100        000    000001123455678899999999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.83  E-value=9.5e-22  Score=136.95  Aligned_cols=61  Identities=25%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      +||+|||++......     ....+||+.|+|||++.+..++.++|||||||+++++++|..||..
T Consensus       241 vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             EEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            899999999875432     2234789999999999888899999999999999999999999854

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.83  E-value=9.6e-22  Score=135.59  Aligned_cols=132  Identities=15%  Similarity=0.140  Sum_probs=83.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+. .++.++||||+||+++++++|..||...... ..+....
T Consensus       180 ~~kL~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~  255 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEII  255 (394)
T ss_dssp             EEEECCCTTCEECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             cEEEeeCCCcccccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            58999999999864332   22345789999999988765 5899999999999999999999998542211 1111111


Q ss_pred             hhh-c--cchhhhh----c---cccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES-L--PDRLTEV----V---DTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~-~--~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ... .  ...+...    .   .+...........+......+.+++.+||+.||.+|||+.|++++
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            100 0  0000000    0   000000000000111234578899999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.4e-21  Score=130.77  Aligned_cols=126  Identities=20%  Similarity=0.232  Sum_probs=75.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++....... ........|++.|+|||.+.+..++.++||||||++++++++|..||......  .......
T Consensus       172 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~  248 (309)
T 2h34_A          172 FAYLVDFGIASATTDEK-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN  248 (309)
T ss_dssp             CEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH
T ss_pred             CEEEecCccCccccccc-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc
Confidence            47999999998764322 12223456899999999998888999999999999999999999998531110  0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHHh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-CMTDAAAKLKKIREKF  145 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~l~~~~~~~  145 (153)
                                  ......   ...+...+..+.+++.+||+.+|++|| ++.++++.|+.+....
T Consensus       249 ------------~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          249 ------------QAIPRP---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             ------------SCCCCG---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             ------------cCCCCc---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence                        000000   001122334678899999999999999 9999999999876654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.83  E-value=2.5e-21  Score=133.62  Aligned_cols=141  Identities=15%  Similarity=0.163  Sum_probs=92.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC--------CCccccccchhhhHHHHHHHhcCCCCCccCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN--------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK   73 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~--------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~   73 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+        ..++.++|||||||+++++++|..||.......
T Consensus       154 ~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~  230 (396)
T 4eut_A          154 VYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (396)
T ss_dssp             EEEECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred             eEEEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence            47999999998764332   2234568999999998754        467889999999999999999999986433222


Q ss_pred             cc---hHHhhhhhccchhhhhc---cccc---hhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           74 TN---LRNWVSESLPDRLTEVV---DTNL---VREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        74 ~~---~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..   ............+....   ....   ................+.+++.+||+.||++||++.|+++.++.+..+
T Consensus       231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             chHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            11   11111111111110000   0000   000111122356677888999999999999999999999999998775


Q ss_pred             h
Q 043099          145 F  145 (153)
Q Consensus       145 ~  145 (153)
                      .
T Consensus       311 ~  311 (396)
T 4eut_A          311 M  311 (396)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=5.7e-22  Score=133.61  Aligned_cols=117  Identities=16%  Similarity=0.180  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++||||+|++++++++|..||......  ...    
T Consensus       172 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~----  242 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETY----  242 (327)
T ss_dssp             CEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH----
T ss_pred             cEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHH----
Confidence            57999999998865332   223457899999999998888999999999999999999999998532110  000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   ..........+.+++.+||+.+|.+|||++|++++
T Consensus       243 -------~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          243 -------LNISQVNVDYS---EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             -------HHHHHTCCCCC---TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             -------HHHHhcccccC---chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence                   00000000000   00011234567889999999999999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.83  E-value=8.7e-22  Score=129.85  Aligned_cols=120  Identities=24%  Similarity=0.341  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....+++.|+|||.+.+..++.++||||+|++++++++ |..|+.....  .......
T Consensus       155 ~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~  227 (278)
T 1byg_A          155 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRV  227 (278)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHH
T ss_pred             cEEEeecccccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            5799999999865322     122356788999999887789999999999999999998 9988753211  0111000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .           ... .     ...+...+..+.+++.+||+.+|.+|||+.|+++.|+.+....
T Consensus       228 ~-----------~~~-~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          228 E-----------KGY-K-----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             T-----------TTC-C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             h-----------cCC-C-----CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            0           000 0     0011223456888999999999999999999999999998764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.83  E-value=8.6e-22  Score=136.83  Aligned_cols=132  Identities=18%  Similarity=0.134  Sum_probs=82.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+....   ......||+.|+|||++.+. .++.++|||||||++++|++|..||..... ...+...+
T Consensus       195 ~~kl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~  270 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII  270 (420)
T ss_dssp             EEEECCCTTCEECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred             eEEeccchhhhhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence            47999999999764332   22345789999999988765 689999999999999999999999854221 11111111


Q ss_pred             hhhc---cchhhhh-------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEV-------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+...       ..+.+.........+......+.+|+.+||..||.+|||+.|++++
T Consensus       271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            1100   0001100       0000000000000011234578899999999999999999999976

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.83  E-value=1.5e-21  Score=132.07  Aligned_cols=107  Identities=22%  Similarity=0.264  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......||+.|+|||.+.+..+ +.++|||||||+++++++|..||....          
T Consensus       168 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----------  234 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE----------  234 (335)
T ss_dssp             CEEECCCTTCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG----------
T ss_pred             cEEEeecccceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH----------
Confidence            58999999998865432   2234578999999999887766 788999999999999999999985310          


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               .........       +......+.+++.+||+.+|.+|||+.|++++
T Consensus       235 ---------~~~~~~~~~-------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          235 ---------ETVEAAIHP-------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ---------GGTTTCCCC-------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ---------HHHhhccCC-------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                     000000000       01123457889999999999999999999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.83  E-value=4.3e-22  Score=130.48  Aligned_cols=123  Identities=26%  Similarity=0.338  Sum_probs=84.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|+|||.+.+..++.++||||+|++++++++ |..||.....  .......
T Consensus       142 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i  218 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDI  218 (267)
T ss_dssp             CEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH
T ss_pred             CEEEccccccccccccc-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHH
Confidence            47999999998754221 111223356788999999987788999999999999999999 8888753111  0000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...        .    ..     ..+......+.+++.+||+.+|.+|||+.|++++|+++.+.
T Consensus       219 ~~~--------~----~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          219 STG--------F----RL-----YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HTT--------C----CC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcC--------C----cC-----CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            000        0    00     00111234678899999999999999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.83  E-value=2.9e-21  Score=136.37  Aligned_cols=116  Identities=21%  Similarity=0.212  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+....   .....+||+.|+|||++.+ .++.++||||+||+++++++|..||.....  ....    
T Consensus       162 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~----  231 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDIL----  231 (486)
T ss_dssp             CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             CEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHH----
Confidence            58999999998764332   2334579999999999876 689999999999999999999999853111  0000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       232 -------~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          232 -------KRVETGKYAFD---LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -------HHHHHTCCCSC---SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -------HHHHhCCCCCC---CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                   01110000000   01112234567899999999999999999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.83  E-value=7.2e-22  Score=131.35  Aligned_cols=129  Identities=19%  Similarity=0.276  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++...... ........|++.|+|||.+.+..++.++||||+|++++++++|..||.....    ....  
T Consensus       149 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~~~~--  221 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETS-LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA----VSIA--  221 (294)
T ss_dssp             CEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH----HHHH--
T ss_pred             CEEEEeCCCcccccccc-ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----HHHH--
Confidence            47999999998764332 1223345689999999999888899999999999999999999999853211    0000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHHhh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-CMTDAAAKLKKIREKFL  146 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~l~~~~~~~~  146 (153)
                             .............  ......+..+.+++.+||+.+|.+|| ++.++.+.|+.+.....
T Consensus       222 -------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          222 -------IKHIQDSVPNVTT--DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             -------HHHHSSCCCCHHH--HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             -------HHHhhccCCCcch--hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence                   0000000000000  00122345688899999999999998 89999999988765543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.83  E-value=2.4e-21  Score=130.21  Aligned_cols=117  Identities=13%  Similarity=0.171  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+..++.++||||+|++++++++|..||.....     .... 
T Consensus       157 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~-  227 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETL-  227 (321)
T ss_dssp             CEEECCCTTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHH-
T ss_pred             CEEEccCccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHH-
Confidence            58999999998765432   22334689999999999888899999999999999999999999843111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........ .  .........+.+++.+||+.||++|||+.|++++
T Consensus       228 -------~~i~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          228 -------ANITSVSYDFD-E--EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -------HHHHTTCCCCC-H--HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -------HHHHhcccccC-h--hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                   00000000000 0  0001223467889999999999999999999975

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.83  E-value=3.7e-21  Score=130.60  Aligned_cols=130  Identities=22%  Similarity=0.207  Sum_probs=82.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++||||+||+++++++|..||....... .......
T Consensus       180 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~  253 (355)
T 2eu9_A          180 SIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-HLVMMEK  253 (355)
T ss_dssp             CEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred             cEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence            5799999999875322     233478999999999988889999999999999999999999986422111 0000000


Q ss_pred             --hhccchhh-hh----------------------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           82 --ESLPDRLT-EV----------------------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        82 --~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                        ...+.... ..                      .....................+.+++.+||+.||.+|||+.|+++
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence              00000000 00                      000000000001111234567889999999999999999999997


Q ss_pred             H
Q 043099          137 K  137 (153)
Q Consensus       137 ~  137 (153)
                      +
T Consensus       334 h  334 (355)
T 2eu9_A          334 H  334 (355)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.83  E-value=1.7e-21  Score=128.21  Aligned_cols=119  Identities=18%  Similarity=0.278  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++................|++.|+|||.+.+..+ +.++||||+|++++++++|..||............+.
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh
Confidence            479999999987643322222344578999999999887664 7789999999999999999999864322211111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....           .      ..........+.+++.+||+.+|.+|||+.|++++
T Consensus       223 ~~~~-----------~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          223 EKKT-----------Y------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             TTCT-----------T------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             hccc-----------c------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            1000           0      00011223457789999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.83  E-value=1.1e-21  Score=129.31  Aligned_cols=125  Identities=23%  Similarity=0.350  Sum_probs=87.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|+|||.+.+..++.++||||||++++++++ |..||.....  .......
T Consensus       147 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~  223 (279)
T 1qpc_A          147 SCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNL  223 (279)
T ss_dssp             CEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH
T ss_pred             CEEECCCcccccccCcc-cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHH
Confidence            58999999998865432 112223456778999999987788999999999999999999 8888743111  0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      ...            ..     ...+...+..+.+++.+||+.+|++|||+.++++.|+.+.....
T Consensus       224 ~~~------------~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          224 ERG------------YR-----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             HTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             hcc------------cC-----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence            000            00     00011233568889999999999999999999999999987643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.83  E-value=2.2e-21  Score=129.95  Aligned_cols=120  Identities=24%  Similarity=0.329  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-----------CCccccccchhhhHHHHHHHhcCCCCCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-----------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMF   70 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-----------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~   70 (153)
                      .+||+|||+++...............|++.|+|||.+.+           ..++.++||||||++++++++|..||....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            479999999987654332222334578999999998765           367889999999999999999999985322


Q ss_pred             CCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           71 TGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      ......            ...........     .+......+.+++.+||+.+|.+|||+.|++++-
T Consensus       244 ~~~~~~------------~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          244 NQISKL------------HAIIDPNHEIE-----FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             SHHHHH------------HHHHCTTSCCC-----CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HHHHHH------------HHHHhcccccC-----CcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            111001            11111110000     0011134678899999999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=3.6e-21  Score=130.25  Aligned_cols=114  Identities=17%  Similarity=0.162  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||++++|++|..||.....     .... 
T Consensus       143 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~-  214 (337)
T 1o6l_A          143 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLF-  214 (337)
T ss_dssp             CEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-
T ss_pred             CEEEeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHH-
Confidence            57999999998643221  123445799999999999888899999999999999999999999853111     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+.....       ..+......+.+++.+||+.||++||     ++.|++++
T Consensus       215 -------~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          215 -------ELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -------HHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -------HHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence                   01110000       01112335678899999999999999     89999876

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.83  E-value=1.3e-21  Score=142.38  Aligned_cols=124  Identities=21%  Similarity=0.332  Sum_probs=84.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........+++.|+|||.+.+..++.++||||||++++++++ |..||.....  ......+
T Consensus       529 ~vkL~DFG~a~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i  605 (656)
T 2j0j_A          529 CVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI  605 (656)
T ss_dssp             EEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH
T ss_pred             CEEEEecCCCeecCCCc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH
Confidence            57999999998764332 222233456789999999988789999999999999999997 8888753211  0010000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                                 .....      .+.+...+..+.+++.+||+.||.+|||+.||++.|+.+.++.
T Consensus       606 -----------~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          606 -----------ENGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             -----------HHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -----------HcCCC------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence                       00000      0111233456889999999999999999999999999997653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.83  E-value=4.3e-21  Score=129.45  Aligned_cols=130  Identities=21%  Similarity=0.183  Sum_probs=83.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     .....||+.|+|||.+.+..++.++||||+||+++++++|..||....... .......
T Consensus       175 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~  248 (339)
T 1z57_A          175 DIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-HLAMMER  248 (339)
T ss_dssp             CEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-HHHHHHH
T ss_pred             CceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence            4799999999875322     233478999999999988889999999999999999999999985422111 0000000


Q ss_pred             --hhccchh-hhh----------------------ccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 043099           82 --ESLPDRL-TEV----------------------VDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAA  136 (153)
Q Consensus        82 --~~~~~~~-~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~  136 (153)
                        ...+... ...                      .....................+.+++.+||+.||.+|||+.||++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence              0000000 000                      000000000001112345677899999999999999999999987


Q ss_pred             H
Q 043099          137 K  137 (153)
Q Consensus       137 ~  137 (153)
                      +
T Consensus       329 h  329 (339)
T 1z57_A          329 H  329 (339)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.83  E-value=7.7e-22  Score=132.90  Aligned_cols=122  Identities=25%  Similarity=0.342  Sum_probs=83.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......+++.|+|||.+.+..++.++||||+|++++++++ |..||.....     ....
T Consensus       180 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~  251 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELY  251 (327)
T ss_dssp             CEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHH
T ss_pred             eEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHH
Confidence            57999999997542211   1223356788999999887788999999999999999998 9999743111     0010


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .        .+.... .     ...+......+.+++.+||+.+|.+|||+.|+++.|+++.++.
T Consensus       252 ~--------~~~~~~-~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          252 E--------KLPQGY-R-----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             H--------HGGGTC-C-----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             H--------HhhcCC-C-----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            0        000000 0     0011123356788999999999999999999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=1.6e-21  Score=134.87  Aligned_cols=67  Identities=18%  Similarity=0.239  Sum_probs=47.5

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.+..... .......+||+.|+|||++.+. .++.++||||+||+++++++|..||..
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence            589999999987653321 1223445789999999998774 589999999999999999999999853

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.83  E-value=2.8e-21  Score=128.10  Aligned_cols=114  Identities=18%  Similarity=0.290  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......    ......|++.|+|||.+.+ .++.++||||+|++++++++|..||......    .....
T Consensus       170 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~  240 (290)
T 1t4h_A          170 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYR  240 (290)
T ss_dssp             CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHH
T ss_pred             CEEEeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHH
Confidence            5799999999764332    2334568999999998865 6899999999999999999999998532211    11110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        .... ....    ..+......+.+++.+||+.+|.+|||+.||+++
T Consensus       241 ~--------~~~~-~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          241 R--------VTSG-VKPA----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             H--------HTTT-CCCG----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             H--------Hhcc-CCcc----ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            0        0000 0000    0011122467889999999999999999999875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.82  E-value=1.1e-21  Score=132.23  Aligned_cols=123  Identities=18%  Similarity=0.211  Sum_probs=66.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc--cchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK--TNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~--~~~~~~   79 (153)
                      .+||+|||+++......  .......||+.|+|||.+.+..++.++||||+||+++++++|..||.......  ......
T Consensus       147 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             EEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH
T ss_pred             cEEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH
Confidence            58999999998764332  12334568999999999988889999999999999999999999986432211  011111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .        ..+.......   ...........+.+++.+||+.||.+|||+.|++++
T Consensus       225 ~--------~~i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          225 M--------KKIKKGDFSF---EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             H--------HHHTTTCCCC---CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             H--------HHHHcCCCCC---CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            1        1111111000   001112234578899999999999999999998865

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.82  E-value=3.4e-21  Score=131.15  Aligned_cols=132  Identities=17%  Similarity=0.148  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+. .++.++|||||||+++++++|..||...... ..+....
T Consensus       170 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~  245 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIV  245 (360)
T ss_dssp             EEEECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             cEEEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHH
Confidence            58999999998765332   22344689999999988654 4899999999999999999999998542211 1111111


Q ss_pred             hhhc---cchhhhhccc---------cchhhhhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEVVDT---------NLVREEQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+......         ........+ .........+.+++.+||+.||.+|||+.|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            1000   0000000000         000000000 0011235678899999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.82  E-value=1.5e-21  Score=128.03  Aligned_cols=117  Identities=20%  Similarity=0.182  Sum_probs=79.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccc---cccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSI---KCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~---~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .++|+|||++....       .....||+.|+|||.+.+..+..   ++||||||++++++++|..||.......     
T Consensus       151 ~~~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----  218 (271)
T 3kmu_A          151 TARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-----  218 (271)
T ss_dssp             CEEEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----
T ss_pred             ceeEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----
Confidence            46777777765432       12246789999999987655443   7999999999999999999985321100     


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .        ..........     ...+......+.+++.+||+.+|.+|||+.|+++.|+++.+
T Consensus       219 ~--------~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          219 I--------GMKVALEGLR-----PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             H--------HHHHHHSCCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             H--------HHHHHhcCCC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            0        0000000000     00112234568889999999999999999999999999865

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.82  E-value=1.5e-21  Score=133.95  Aligned_cols=115  Identities=11%  Similarity=0.136  Sum_probs=81.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-----------CccccccchhhhHHHHHHHhcCCCCCccC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-----------IVSIKCDVYSYGVLLMEAFTKKKPTNEMF   70 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-----------~~~~~~dv~s~g~~~~~~~~g~~p~~~~~   70 (153)
                      .+||+|||+++....     ......| +.|+|||.+.+.           .++.++|||||||+++++++|..||....
T Consensus       244 ~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~  317 (377)
T 3byv_A          244 GVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDA  317 (377)
T ss_dssp             CEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             CEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccc
Confidence            589999999986432     2334467 899999998876           78999999999999999999999985321


Q ss_pred             CCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHHhh
Q 043099           71 TGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIREKFL  146 (153)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~~~~  146 (153)
                      ...             ........     .      ...+..+.+++.+||+.||.+|||+.|++++  +..+.....
T Consensus       318 ~~~-------------~~~~~~~~-----~------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~  371 (377)
T 3byv_A          318 ALG-------------GSEWIFRS-----C------KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS  371 (377)
T ss_dssp             --C-------------CSGGGGSS-----C------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHHH
T ss_pred             ccc-------------chhhhhhh-----c------cCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHHH
Confidence            110             00011000     0      1123467889999999999999999999974  666665543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.82  E-value=1.2e-21  Score=129.78  Aligned_cols=115  Identities=23%  Similarity=0.272  Sum_probs=73.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+....   ......|++.|+|||.+.+ .++.++||||+|++++++++|..||......  .......
T Consensus       165 ~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~  238 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKAT  238 (285)
T ss_dssp             CEEECCCCCCCC-------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred             CEEEEeeecceecCCcc---cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhc
Confidence            48999999998764332   2334568999999998864 6889999999999999999999998532110  0000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .         .........      ......+.+++.+||+.||++|||+.|++++
T Consensus       239 ~---------~~~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          239 Y---------KEPNYAVEC------RPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             H---------CCCCCCC--------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             c---------CCccccccc------CcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0         000000000      0123457789999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=1.9e-21  Score=133.61  Aligned_cols=138  Identities=17%  Similarity=0.114  Sum_probs=86.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+. .++.++||||+||+++++++|..||...... ..+...+
T Consensus       180 ~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~  255 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRII  255 (383)
T ss_dssp             EEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             cEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence            58999999999764332   23345689999999988765 5899999999999999999999998542211 1111111


Q ss_pred             hhhc---cchhhh-------hccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 043099           81 SESL---PDRLTE-------VVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIRE  143 (153)
Q Consensus        81 ~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~  143 (153)
                      ....   ...+..       ...+...........+......+.+++.+||+.+|.+|||+.|++++  ++.++.
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          256 QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred             HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence            1000   000000       00000000000000112234568899999999999999999999976  555554

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.82  E-value=5.4e-21  Score=133.25  Aligned_cols=119  Identities=18%  Similarity=0.205  Sum_probs=75.0

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHh-cCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++....... ........||+.|+|||++.+   ..++.++||||+||+++++++ |..||.......  .
T Consensus       161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~--~  238 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--A  238 (432)
T ss_dssp             CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--H
T ss_pred             eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--H
Confidence            478999999987653321 122344579999999999873   457789999999999999999 888874311100  0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                  ...........   ..........+.+++.+||+.||.+|||+.||+++
T Consensus       239 ------------~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          239 ------------NILLGACSLDC---LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             ------------HHHTTCCCCTT---SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ------------HHHhccCCccc---cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence                        00000000000   00012233457789999999999999999999964

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.82  E-value=4.9e-22  Score=141.75  Aligned_cols=123  Identities=27%  Similarity=0.416  Sum_probs=85.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...... ........++..|+|||.+.+..++.++|||||||+++++++ |..||.....  ......+
T Consensus       401 ~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i  477 (535)
T 2h8h_A          401 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV  477 (535)
T ss_dssp             CEEECCTTSTTTCCCHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHH
T ss_pred             cEEEcccccceecCCCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence            58999999998764221 111223346788999999888789999999999999999999 8888753111  0011000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..           . .     ..+.+..++..+.+++.+||+.+|++|||+.+|++.|+.+...
T Consensus       478 ~~-----------~-~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          478 ER-----------G-Y-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HT-----------T-C-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             Hc-----------C-C-----CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            00           0 0     0111123445688999999999999999999999999987653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.82  E-value=1e-21  Score=134.02  Aligned_cols=120  Identities=20%  Similarity=0.234  Sum_probs=71.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCcccc-ccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIK-CDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~-~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......||+.|+|||++.+..+..+ +||||+||+++++++|..||....... ......
T Consensus       156 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~  231 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTI  231 (361)
T ss_dssp             CEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHH
T ss_pred             eEEEeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHH
Confidence            38999999998543221   2234578999999999887776655 899999999999999999985422211 111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                      .        .......     ..+........+.+++.+||+.+|.+|||+.|++++-
T Consensus       232 ~--------~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp  276 (361)
T 3uc3_A          232 Q--------RILSVKY-----SIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS  276 (361)
T ss_dssp             H--------HHHTTCC-----CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred             H--------HHhcCCC-----CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence            1        1111000     0011111234678899999999999999999999873

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.82  E-value=1.3e-21  Score=131.15  Aligned_cols=126  Identities=18%  Similarity=0.194  Sum_probs=79.6

Q ss_pred             ceEecccccceeccCCC---CCcccccccccccccCcCccCC---------CCccccccchhhhHHHHHHHhcCCCCCcc
Q 043099            2 VAHVSDFGISKLLGEGD---GSMTQTMTMATIGYMAPEYGSN---------GIVSIKCDVYSYGVLLMEAFTKKKPTNEM   69 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~---~~~~~~~~~g~~~~~~pe~~~~---------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~   69 (153)
                      .+||+|||+++......   .........|++.|+|||.+.+         ..++.++||||||++++++++|..||...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            47899999987653211   1112233468899999998764         34788999999999999999999997532


Q ss_pred             CCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           70 FTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...  .........        .......        ......+.+++.+||+.+|.+|||+.++++.|+.+..+.
T Consensus       247 ~~~--~~~~~~~~~--------~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          247 PAE--AIIWQMGTG--------MKPNLSQ--------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             CHH--HHHHHHHTT--------CCCCCCC--------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             CHH--HHHHHhccC--------CCCCCCc--------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            110  000000000        0000000        012235778999999999999999999999999998775

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.82  E-value=5.2e-21  Score=132.65  Aligned_cols=113  Identities=12%  Similarity=0.129  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCcc----------CCCCccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYG----------SNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~----------~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .+||+|||+++.....     ....+| +.|+|||++          ....++.++|||||||+++++++|..||.....
T Consensus       249 ~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA  322 (413)
T ss_dssp             CEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred             eEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            4899999999875322     233467 899999988          555688899999999999999999999853211


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIREK  144 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~~  144 (153)
                      ..             ........     .      ...+..+.+++.+||+.+|++||++.|++++  ++.+.+.
T Consensus       323 ~~-------------~~~~~~~~-----~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~  373 (413)
T 3dzo_A          323 LG-------------GSEWIFRS-----C------KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE  373 (413)
T ss_dssp             GS-------------CSGGGGSS-----C------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred             hh-------------hHHHHHhh-----c------ccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHHH
Confidence            00             00111100     0      0122468889999999999999999888765  4444443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=3.7e-21  Score=130.47  Aligned_cols=123  Identities=19%  Similarity=0.170  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.......  .....+||+.|+|||++.+..++.++||||+||+++++++|..||.......  ......
T Consensus       158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~  233 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILA  233 (342)
T ss_dssp             GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHH
T ss_pred             eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHH
Confidence            489999999997654321  2334578999999999987778999999999999999999999985321111  111100


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                              .+........   ..........+.+++.+||..||++|||+.|++++-.
T Consensus       234 --------~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~  280 (342)
T 2qr7_A          234 --------RIGSGKFSLS---GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW  280 (342)
T ss_dssp             --------HHHHCCCCCC---STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             --------HHccCCcccC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence                    0000000000   0001123356788999999999999999999998643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.82  E-value=4.5e-21  Score=129.11  Aligned_cols=115  Identities=24%  Similarity=0.259  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCC----------cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGS----------MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~----------~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .+||+|||+++........          .......||+.|+|||.+.+..++.++||||+||+++++++|..|+..   
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---  278 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---  278 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---
Confidence            5899999999987543211          122345799999999999888899999999999999999998665311   


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          ..        ...........      ..........+.+++.+||+.||.+|||+.|++++
T Consensus       279 ----~~--------~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          279 ----RV--------RIITDVRNLKF------PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             ----HH--------HHHHHHHTTCC------CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             ----HH--------HHHHHhhccCC------CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence                00        00000000000      01113344567889999999999999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.82  E-value=1.9e-21  Score=128.95  Aligned_cols=133  Identities=20%  Similarity=0.139  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+. .++.++||||+||+++++++|..||...... ..+....
T Consensus       138 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~  214 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIF  214 (288)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred             CEEEeECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            57999999998764322  122334689999999988764 5899999999999999999999998542211 1111111


Q ss_pred             hhh---ccchhhhhc-----cccchh--hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES---LPDRLTEVV-----DTNLVR--EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~---~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   ....+....     +.....  ..............+.+++.+||+.||++|||+.|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            100   000000000     000000  000000001234567889999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=2.4e-21  Score=135.55  Aligned_cols=114  Identities=18%  Similarity=0.156  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|||||||+++++++|..||.....  ....    
T Consensus       287 ~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~----  358 (446)
T 4ejn_A          287 HIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLF----  358 (446)
T ss_dssp             CEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             CEEEccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHH----
Confidence            58999999998643221  223446799999999999888899999999999999999999999853111  0000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+.....       ..+......+.+++.+||+.||.+||     ++.|++++
T Consensus       359 -------~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          359 -------ELILMEEI-------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             -------HHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -------HHHHhCCC-------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence                   00000000       01112335678899999999999999     99999875

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.82  E-value=1.8e-21  Score=132.32  Aligned_cols=114  Identities=20%  Similarity=0.213  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++....      .....|++.|+|||++.   ...++.++|||||||+++++++|..||...... ..+..
T Consensus       192 ~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~  264 (348)
T 1u5q_A          192 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYH  264 (348)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHH
T ss_pred             CEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH
Confidence            589999999987532      22347899999999874   456889999999999999999999997532110 00000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .....         .....        .......+.+++.+||+.+|.+|||+.|++++..
T Consensus       265 ~~~~~---------~~~~~--------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          265 IAQNE---------SPALQ--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  308 (348)
T ss_dssp             HHHSC---------CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred             HHhcC---------CCCCC--------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence            00000         00000        0112345778999999999999999999987643

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.82  E-value=3.6e-21  Score=127.46  Aligned_cols=116  Identities=21%  Similarity=0.261  Sum_probs=70.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCcc----CCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYG----SNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~----~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++......   ......|++.|+|||.+    .+..++.++||||+|++++++++|..||...........
T Consensus       148 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  224 (290)
T 3fme_A          148 QVKMCDFGISGYLVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK  224 (290)
T ss_dssp             CEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred             CEEEeecCCcccccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH
Confidence            57999999998764332   22334689999999985    455688999999999999999999999853211111111


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .......            ...     ........+.+++.+||+.+|++|||+.|++++
T Consensus       225 ~~~~~~~------------~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          225 QVVEEPS------------PQL-----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             HHHHSCC------------CCC-----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHhccCC------------CCc-----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            1111000            000     001223467889999999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.82  E-value=6.7e-21  Score=130.42  Aligned_cols=132  Identities=15%  Similarity=0.091  Sum_probs=75.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......|++.|+|||++.+..++.++||||+||+++++++|..||...... ..+.....
T Consensus       165 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~  240 (371)
T 2xrw_A          165 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIE  240 (371)
T ss_dssp             CEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC
T ss_pred             CEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            58999999998764321   233457899999999998888999999999999999999999998542210 00110000


Q ss_pred             hh----------ccchhhhhcc--c-----cchhh------hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ES----------LPDRLTEVVD--T-----NLVRE------EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~----------~~~~~~~~~~--~-----~~~~~------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..          ..........  +     .....      +............+.+++.+||..||++|||++|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             -CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence            00          0000000000  0     00000      00001112345678999999999999999999999987

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=4.9e-21  Score=135.48  Aligned_cols=116  Identities=20%  Similarity=0.240  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+ .++.++||||+||+++++++|..||.....  ....    
T Consensus       177 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~----  246 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEIL----  246 (494)
T ss_dssp             CEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             cEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHH----
Confidence            48999999998875432   2334579999999998864 689999999999999999999999853211  0010    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       247 -------~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          247 -------RKVEKGKYTFD---SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             -------HHHHHTCCCCC---SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             -------HHHHhCCCCCC---chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence                   00100000000   00011233567889999999999999999999976

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.82  E-value=3.7e-22  Score=132.24  Aligned_cols=124  Identities=17%  Similarity=0.205  Sum_probs=78.6

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      +||+|||++.....      .....|++.|+|||.+.+ ..++.++||||||++++++++|..|+........ ......
T Consensus       160 ~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~  232 (289)
T 4fvq_A          160 IKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYE  232 (289)
T ss_dssp             EEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHH
T ss_pred             eeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhh
Confidence            89999999875421      223457889999999877 5789999999999999999996554322111000 000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcCCCC
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAAT  152 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~~~~  152 (153)
                      .          ....         +......+.+++.+||+.||.+|||+.|++++|+++..--..+..++
T Consensus       233 ~----------~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~~~  284 (289)
T 4fvq_A          233 D----------RHQL---------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSH  284 (289)
T ss_dssp             T----------TCCC---------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----------
T ss_pred             c----------cCCC---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCCcc
Confidence            0          0000         00112347789999999999999999999999999887655444443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.82  E-value=1.4e-21  Score=137.86  Aligned_cols=116  Identities=24%  Similarity=0.252  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+....   ......||+.|+|||++.+ .++.++||||+||+++++++|..||.....  ....    
T Consensus       167 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~----  236 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDIL----  236 (484)
T ss_dssp             CEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             cEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHH----
Confidence            57999999998765432   2334579999999999876 689999999999999999999999853111  0010    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       237 -------~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          237 -------KKVEKGKYTFE---LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             -------HHHHHCCCCCC---SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -------HHHHcCCCCCC---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence                   11111100000   01112234567899999999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.82  E-value=7.4e-21  Score=125.63  Aligned_cols=125  Identities=17%  Similarity=0.225  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+..++.++||||||++++++++|..||.....     .... 
T Consensus       150 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-  220 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETL-  220 (283)
T ss_dssp             CEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-
T ss_pred             ceEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHH-
Confidence            58999999998764332   22334689999999999888899999999999999999999999753211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHHHh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIREKF  145 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~~~~  145 (153)
                             ..+........   ..........+.+++.+||+.+|.+|||+.|++++  ++.++.+.
T Consensus       221 -------~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          221 -------TNISAVNYDFD---EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             -------HHHHTTCCCCC---HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             -------HHhHhcccCCc---chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence                   00000000000   00011223467889999999999999999999985  66665543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=4.8e-21  Score=135.82  Aligned_cols=116  Identities=19%  Similarity=0.214  Sum_probs=80.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   ......||+.|+|||++.+ .++.++||||+||+++++++|..||.....  ...     
T Consensus       187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~-----  255 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDI-----  255 (504)
T ss_dssp             SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH-----
T ss_pred             cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHH-----
Confidence            58999999998875432   2334579999999999875 689999999999999999999999853111  001     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+........   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       256 ------~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          256 ------IKKVEKGKYYFD---FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ------HHHHHHCCCCCC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHcCCCCCC---ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                  011111110000   00011234568899999999999999999999976

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.81  E-value=5.4e-21  Score=130.65  Aligned_cols=117  Identities=21%  Similarity=0.205  Sum_probs=79.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC------CCccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN------GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~------~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      .+||+|||++..+....   ......||+.|+|||++.+      ..++.++|||||||+++++++|..||.....  ..
T Consensus       238 ~ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~  312 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--IL  312 (365)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HH
T ss_pred             CEEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HH
Confidence            58999999998775432   2334578999999998752      3588899999999999999999999843110  00


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....           +........   .+........+.+++.+||+.||.+|||+.|++++
T Consensus       313 ~~~~-----------i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          313 MLRM-----------IMEGQYQFS---SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHHH-----------HHHTCCCCC---HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHH-----------HHhCCCCCC---CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0000           000000000   00001223467889999999999999999999874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=6.4e-21  Score=127.67  Aligned_cols=117  Identities=21%  Similarity=0.267  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......|++.|+|||.+.+..++.++||||||++++++++|..||.....    ......
T Consensus       163 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~  236 (314)
T 3com_A          163 HAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP----MRAIFM  236 (314)
T ss_dssp             CEEECCCTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHH
T ss_pred             CEEEeecccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh----HHHHHH
Confidence            57999999998765332  123345689999999999888899999999999999999999999753211    000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            .......       ....+......+.+++.+||+.+|.+|||+.|++++
T Consensus       237 ------~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          237 ------IPTNPPP-------TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             ------HHHSCCC-------CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ------HhcCCCc-------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                  0000000       001112233567889999999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.81  E-value=1.2e-20  Score=132.39  Aligned_cols=62  Identities=24%  Similarity=0.288  Sum_probs=44.9

Q ss_pred             ceEecccccceeccCCCCC-------------------------cccccccccccccCcCcc-CCCCccccccchhhhHH
Q 043099            2 VAHVSDFGISKLLGEGDGS-------------------------MTQTMTMATIGYMAPEYG-SNGIVSIKCDVYSYGVL   55 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-------------------------~~~~~~~g~~~~~~pe~~-~~~~~~~~~dv~s~g~~   55 (153)
                      .+||+|||+++........                         ......+||+.|+|||++ .+..++.++||||+||+
T Consensus       194 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i  273 (458)
T 3rp9_A          194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI  273 (458)
T ss_dssp             CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence            5899999999876422110                         122345789999999975 45579999999999999


Q ss_pred             HHHHHhcC
Q 043099           56 LMEAFTKK   63 (153)
Q Consensus        56 ~~~~~~g~   63 (153)
                      ++||++|.
T Consensus       274 l~elltg~  281 (458)
T 3rp9_A          274 FAELLNMI  281 (458)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHHhc
Confidence            99999853

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.81  E-value=9.7e-21  Score=130.07  Aligned_cols=115  Identities=23%  Similarity=0.272  Sum_probs=78.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++......   .....+||+.|+|||++.+   ..++.++||||+||+++++++|..||.......  ...
T Consensus       153 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~  227 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKE  227 (384)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHH
T ss_pred             CEEEeccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHH
Confidence            58999999998765332   2344679999999999864   358899999999999999999999985322111  111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-HHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-MTDAAA  136 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~  136 (153)
                      ...        ......       ...+......+.+++.+||+.+|.+||+ +.+|++
T Consensus       228 ~~~--------~~~~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          228 IVH--------TFETTV-------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHH--------HHHHCC-------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHH--------HHhhcc-------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            100        000000       0011223456888999999999999999 676665

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.81  E-value=6.6e-21  Score=125.56  Aligned_cols=116  Identities=19%  Similarity=0.253  Sum_probs=79.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+ .++.++||||+|++++++++|..||.....  ....    
T Consensus       147 ~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~----  216 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD--SEVM----  216 (277)
T ss_dssp             CEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             cEEEEecccceeccCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH--HHHH----
Confidence            47999999998765332   2334468999999998876 489999999999999999999999853211  0000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+.........   .........+.+++.+||+.+|.+|||+.|++++
T Consensus       217 -------~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          217 -------LKIREGTFTFPE---KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             -------HHHHHCCCCCCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             -------HHHHhCCCCCCc---hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   000000000000   0001234567889999999999999999999975

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.81  E-value=2.5e-21  Score=130.60  Aligned_cols=133  Identities=18%  Similarity=0.122  Sum_probs=76.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||++.+. .++.++||||+||+++++++|..||....... .+....
T Consensus       175 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~  251 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIF  251 (329)
T ss_dssp             EEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred             eEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHH
Confidence            48999999998764332  123344689999999998764 58999999999999999999999985422111 111111


Q ss_pred             hh-hcc--chhhhhcc--------ccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE-SLP--DRLTEVVD--------TNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~-~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. ..+  ........        ...................+.+++.+||+.||.+|||+.|++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          252 EVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            10 000  00000000        00000000000011133567899999999999999999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.81  E-value=7.2e-21  Score=127.77  Aligned_cols=132  Identities=19%  Similarity=0.175  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.......  ......|++.|+|||++.+. .++.++||||+||+++++++|..||...... .......
T Consensus       146 ~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~  222 (317)
T 2pmi_A          146 QLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIF  222 (317)
T ss_dssp             CEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred             CEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence            589999999987653321  22344789999999998764 6899999999999999999999998532211 1111111


Q ss_pred             hh---hccchhhhhcc-----c--------cchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEVVD-----T--------NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .....+.....     .        .+... ............+.+++.+||+.||.+|||+.|++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQV-LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHH-HGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHhCCCChhHhhhhhhhhhcccccccccchhHHHh-hcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            10   00000000000     0        00000 0000001223468899999999999999999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.81  E-value=2.2e-21  Score=130.04  Aligned_cols=117  Identities=22%  Similarity=0.260  Sum_probs=71.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++.......   ......|++.|+|||.+.     ...++.++||||||++++++++|..||..........
T Consensus       163 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (318)
T 2dyl_A          163 QIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL  239 (318)
T ss_dssp             CEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             CEEEEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH
Confidence            58999999998764322   223346899999999884     4468889999999999999999999985422111111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ........                ...+........+.+++.+||+.||.+|||+.|++++
T Consensus       240 ~~~~~~~~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          240 TKVLQEEP----------------PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             HHHHHSCC----------------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             HHHhccCC----------------CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            11111000                0000001123467889999999999999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=7.9e-21  Score=130.96  Aligned_cols=120  Identities=15%  Similarity=0.236  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccc---hHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN---LRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~---~~~   78 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||++++|++|..||.........   ...
T Consensus       191 ~ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~  268 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  268 (396)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH
T ss_pred             CEEEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH
Confidence            58999999998643221  2344568999999999999889999999999999999999999998532211100   000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM------TDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~~  137 (153)
                      ..       ...+....       ...+......+.+++.+||+.||.+||++      .|++++
T Consensus       269 ~~-------~~~i~~~~-------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          269 YL-------FQVILEKQ-------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             HH-------HHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             HH-------HHHHhccc-------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence            00       00111110       01112234567889999999999999995      677665

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.81  E-value=8.3e-21  Score=126.68  Aligned_cols=116  Identities=23%  Similarity=0.210  Sum_probs=80.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....    ......|++.|+|||.+.+..++.++||||+|++++++++|..||.....  ........
T Consensus       147 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~  220 (304)
T 2jam_A          147 KIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIK  220 (304)
T ss_dssp             CEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred             CEEEccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence            5799999999764322    22334689999999999888899999999999999999999999753211  00100000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .           ......   .+........+.+++.+||+.||.+|||+.|++++
T Consensus       221 ~-----------~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          221 E-----------GYYEFE---SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             H-----------CCCCCC---TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             c-----------CCCCCC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0           000000   00012234568889999999999999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.81  E-value=6.8e-21  Score=134.00  Aligned_cols=113  Identities=21%  Similarity=0.338  Sum_probs=80.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   .....+|++.|+|||++.+..+ +.++||||+||+++++++|..||.....  ...    
T Consensus       154 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~----  224 (476)
T 2y94_A          154 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTL----  224 (476)
T ss_dssp             CEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHH----
T ss_pred             CeEEEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHH----
Confidence            58999999999865432   2334579999999999987655 6889999999999999999999853211  001    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ...+......       .+......+.+++.+||+.||.+|||+.|++++
T Consensus       225 -------~~~i~~~~~~-------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          225 -------FKKICDGIFY-------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             -------HHHHHTTCCC-------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             -------HHHHhcCCcC-------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence                   0111111100       011123467889999999999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=1.1e-20  Score=129.09  Aligned_cols=135  Identities=18%  Similarity=0.166  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........||+.|+|||.+.+ ..++.++||||+||+++++++|..||....... .+...
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i  244 (364)
T 3qyz_A          166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHI  244 (364)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHH
T ss_pred             CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHH
Confidence            589999999987643221 111234578999999998654 458999999999999999999999985422111 11111


Q ss_pred             hh---hhccchhhhhccccchhh------hhcc---hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VS---ESLPDRLTEVVDTNLVRE------EQNF---SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~---~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ..................      ....   .........+.+++.+||+.||.+|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            11   000000000000000000      0000   0001223568899999999999999999999975

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.81  E-value=4.4e-20  Score=126.09  Aligned_cols=120  Identities=14%  Similarity=-0.019  Sum_probs=84.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+............+||+.|+|||++.+..++.++|||||||+++++++|..||.........      
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------  294 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------  294 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee------
Confidence            58999999998764322233345567999999999999888999999999999999999999997432111000      


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCC-CCHHHHHHHHHHHHHHh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQR-ICMTDAAAKLKKIREKF  145 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-ps~~evl~~l~~~~~~~  145 (153)
                                .......    ..    ....+.+++..|++.+|.+| |++.++.+.|+.+..+.
T Consensus       295 ----------~~~~~~~----~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          295 ----------PEGLFRR----LP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             ----------ECSCCTT----CS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ----------echhccc----cC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence                      0000000    01    12345567888999999999 56888888888877664

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.81  E-value=5.4e-21  Score=126.11  Aligned_cols=113  Identities=20%  Similarity=0.204  Sum_probs=77.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......    ......|++.|+|||.+.+..++.++||||+|++++++++|..||.....     .... 
T Consensus       147 ~~~l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-  216 (279)
T 3fdn_A          147 ELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETY-  216 (279)
T ss_dssp             CEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-
T ss_pred             CEEEEeccccccCCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHH-
Confidence            5799999998654322    22344689999999999888889999999999999999999999853110     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                             ..+....       ...+......+.+++.+||+.+|.+|||+.|++++-
T Consensus       217 -------~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~  259 (279)
T 3fdn_A          217 -------KRISRVE-------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP  259 (279)
T ss_dssp             -------HHHHHTC-------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred             -------HHHHhCC-------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence                   0000000       001112334677899999999999999999999873

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.81  E-value=3.7e-21  Score=129.50  Aligned_cols=132  Identities=15%  Similarity=0.098  Sum_probs=77.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+ ..++.++||||+||+++++++|..||....... ......
T Consensus       138 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~  214 (324)
T 3mtl_A          138 ELKLADFGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIF  214 (324)
T ss_dssp             CEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred             CEEEccCcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence            57999999998754322  12334468999999998876 468999999999999999999999985422111 111111


Q ss_pred             h---hhccchhhhhccc---------cchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S---ESLPDRLTEVVDT---------NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~---~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .   ......+......         ..... ............+.+++.+||+.||.+|||++|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          215 RILGTPTEETWPGILSNEEFKTYNYPKYRAE-ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HHHCCCCTTTSTTGGGCHHHHHTCCCCCCCC-CHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHhCCCChHhchhhhcchhhcccccccccch-hhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            1   0001111111000         00000 0000111234567899999999999999999999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.81  E-value=9.5e-21  Score=130.37  Aligned_cols=135  Identities=13%  Similarity=0.146  Sum_probs=79.7

Q ss_pred             ceEecccccceeccCCCC-----CcccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-----~~~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      .+||+|||.+........     ........|++.|+|||++.+  ..++.++||||+||+++++++|..||........
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  245 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  245 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            579999999876532111     111223478899999999877  5789999999999999999999999864222111


Q ss_pred             chHHhhhhhccchh-----------------------hhhccc----cchhhhhcchhhHHHHHHHHHHHhhccccCCCC
Q 043099           75 NLRNWVSESLPDRL-----------------------TEVVDT----NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQ  127 (153)
Q Consensus        75 ~~~~~~~~~~~~~~-----------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  127 (153)
                       .........+...                       ......    .........+.+......+.+++.+||+.||++
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  324 (389)
T 3gni_B          246 -LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDA  324 (389)
T ss_dssp             -HHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTT
T ss_pred             -HHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence             1111100000000                       000000    000000001112234467889999999999999


Q ss_pred             CCCHHHHHHH
Q 043099          128 RICMTDAAAK  137 (153)
Q Consensus       128 Rps~~evl~~  137 (153)
                      |||+.|++++
T Consensus       325 Rpta~ell~h  334 (389)
T 3gni_B          325 RPSASTLLNH  334 (389)
T ss_dssp             SCCHHHHTTS
T ss_pred             CCCHHHHhcC
Confidence            9999999976

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.81  E-value=3.7e-21  Score=128.79  Aligned_cols=124  Identities=21%  Similarity=0.319  Sum_probs=74.0

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+...... .......|++.|+|||.+.+..++.++||||+|++++++++|..||.......     ..
T Consensus       154 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~  228 (311)
T 3ork_A          154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VA  228 (311)
T ss_dssp             CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HH
T ss_pred             CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HH
Confidence            4799999999876533211 12234568999999999988889999999999999999999999985311100     00


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH-HHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK-LKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~-l~~~  141 (153)
                              ............   .........+.+++.+||+.||.+||++.+++.+ +.++
T Consensus       229 --------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          229 --------YQHVREDPIPPS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             --------HHHHHCCCCCHH---HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --------HHHhcCCCCCcc---cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                    000000000000   0001234567889999999999999987766654 4444

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.81  E-value=3.7e-21  Score=129.52  Aligned_cols=119  Identities=24%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCcc----CCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYG----SNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~----~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++......   ......|++.|+|||.+    .+..++.++||||||++++++++|..||.......... 
T Consensus       164 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-  239 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-  239 (327)
T ss_dssp             EEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------
T ss_pred             CEEEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-
Confidence            58999999998764332   22334689999999998    44568899999999999999999999985321110000 


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .............  .........+.+++.+||+.||.+|||+.|++++
T Consensus       240 -----------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          240 -----------TQVVKGDPPQLSN--SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             -----------CCCCCSCCCCCCC--CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             -----------HHHhcCCCCCCCC--cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence                       0000000000000  0001123468889999999999999999999886

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.81  E-value=5.4e-21  Score=129.01  Aligned_cols=133  Identities=20%  Similarity=0.178  Sum_probs=77.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+. .++.++||||+||+++++++|..||....... ......
T Consensus       162 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~  238 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIM  238 (331)
T ss_dssp             CEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred             cEEEEeCCCceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHH
Confidence            57999999998764322  122345689999999998775 68899999999999999999999985422111 011110


Q ss_pred             hh--hccch----------hhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE--SLPDR----------LTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..  .....          ......+..................+.+++.+||+.||.+|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          239 MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             HHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00  00000          00000000000000000011234678899999999999999999999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=1.6e-20  Score=128.43  Aligned_cols=130  Identities=22%  Similarity=0.212  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....+|+.|+|||++.+ ..++.++||||+||+++++++|..||...... ..+....
T Consensus       166 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~  239 (367)
T 1cm8_A          166 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIM  239 (367)
T ss_dssp             CEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             CEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            5899999999875422     234578999999998876 57899999999999999999999998532110 0111111


Q ss_pred             hh-hc-cc-hhhhhcccc-------chh-hhhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE-SL-PD-RLTEVVDTN-------LVR-EEQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~-~~-~~-~~~~~~~~~-------~~~-~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. +. +. ....+....       ... ....+ .........+.+++.+||..||.+|||+.|++++
T Consensus       240 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          240 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            10 00 00 000000000       000 00000 0011234568899999999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.81  E-value=7.2e-21  Score=127.26  Aligned_cols=134  Identities=16%  Similarity=0.157  Sum_probs=75.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccc--hHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN--LRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~--~~~   78 (153)
                      .+||+|||+++.......  ......|++.|+|||.+.+ ..++.++||||+|++++++++|..||.........  ...
T Consensus       140 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK  217 (311)
T ss_dssp             CEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            579999999988653321  2234578999999998865 46899999999999999999999998542211100  000


Q ss_pred             hhhhhccchhhhh-----c-cccch---hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEV-----V-DTNLV---REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~-----~-~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ......+......     . .....   ...............+.+++.+||+.||.+|||++|++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             HhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0000000000000     0 00000   0000000001234567889999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1e-20  Score=128.42  Aligned_cols=133  Identities=18%  Similarity=0.196  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+....  .......||+.|+|||.+.+. .++.++||||+||+++++++|..|+..... ...+....
T Consensus       150 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~  226 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIF  226 (346)
T ss_dssp             CEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred             CEEEEecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHH
Confidence            58999999998764332  123345789999999988654 588999999999999999999988753211 11111111


Q ss_pred             hhhc---cchhhhhcc-ccch--hhhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL---PDRLTEVVD-TNLV--REEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~---~~~~~~~~~-~~~~--~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....   ...+..... ....  ...+..+   ........+.+++.+||+.||.+|||+.|++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          227 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1100   000000000 0000  0000000   001233578899999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.80  E-value=1.5e-20  Score=127.14  Aligned_cols=121  Identities=17%  Similarity=0.110  Sum_probs=63.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....    ......|++.|+|||.+.+..++.++||||+|++++++++|..||..........     
T Consensus       169 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----  239 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-----  239 (336)
T ss_dssp             CEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred             eEEEeccccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-----
Confidence            4899999999876432    2233467999999999988889999999999999999999999985322111000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                          ..............   .+........+.+++.+||+.||.+|||+.|++++-
T Consensus       240 ----~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  289 (336)
T 3fhr_A          240 ----GMKRRIRLGQYGFP---NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP  289 (336)
T ss_dssp             ---------------CCC---TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             ----hHHHhhhccccccC---chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence                00000000000000   000112345678899999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.80  E-value=1.5e-20  Score=127.66  Aligned_cols=135  Identities=18%  Similarity=0.181  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.+.....  ........||+.|+|||++.+. .++.++||||+||+++++++|..||....... ....
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~  240 (351)
T 3mi9_A          162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLAL  240 (351)
T ss_dssp             CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred             CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHH
Confidence            589999999987653221  1222345789999999988764 58999999999999999999999985422110 0110


Q ss_pred             hh---hhhccchhhhhcccc----ch---hhhhcchhh---HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WV---SESLPDRLTEVVDTN----LV---REEQNFSAK---LDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~---~~~~~~~~~~~~~~~----~~---~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   ....+..........    ..   .........   ......+.+++.+||+.||.+|||+.|++++
T Consensus       241 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          241 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00   000011001000000    00   000000000   0113457899999999999999999999986

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.80  E-value=1.6e-20  Score=130.87  Aligned_cols=65  Identities=22%  Similarity=0.312  Sum_probs=47.0

Q ss_pred             ceEecccccceeccCCCCC--------------------cccccccccccccCcCcc-CCCCccccccchhhhHHHHHHH
Q 043099            2 VAHVSDFGISKLLGEGDGS--------------------MTQTMTMATIGYMAPEYG-SNGIVSIKCDVYSYGVLLMEAF   60 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~--------------------~~~~~~~g~~~~~~pe~~-~~~~~~~~~dv~s~g~~~~~~~   60 (153)
                      .+||+|||+++........                    ......+||+.|+|||++ ....++.++||||+||++++++
T Consensus       167 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            5899999999986533211                    112456789999999985 4557999999999999999999


Q ss_pred             hcCCCC
Q 043099           61 TKKKPT   66 (153)
Q Consensus        61 ~g~~p~   66 (153)
                      +|..|+
T Consensus       247 ~g~~p~  252 (432)
T 3n9x_A          247 NMLQSH  252 (432)
T ss_dssp             TTCTTT
T ss_pred             hccccc
Confidence            866554

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.80  E-value=2.1e-21  Score=132.16  Aligned_cols=114  Identities=18%  Similarity=0.185  Sum_probs=76.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....  .......+||+.|+|||++.+..++.++|+||+||++++|++|..||.....  .   ..  
T Consensus       162 ~ikL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~--  232 (353)
T 3txo_A          162 HCKLADFGMCKEGICN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--D---DL--  232 (353)
T ss_dssp             CEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HH--
T ss_pred             CEEEccccceeecccC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--H---HH--
Confidence            5799999999864322  1233445799999999999887899999999999999999999999853211  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM------TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~~  137 (153)
                            ...+......       .+......+.+++.+||+.+|.+||++      .|++++
T Consensus       233 ------~~~i~~~~~~-------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          233 ------FEAILNDEVV-------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             ------HHHHHHCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             ------HHHHHcCCCC-------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence                  1111111110       111233457789999999999999998      778765

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.80  E-value=8e-21  Score=125.21  Aligned_cols=114  Identities=18%  Similarity=0.274  Sum_probs=60.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++........  ......|++.|+|||.+.+..++.++||||+|++++++++|..||........       
T Consensus       150 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------  220 (278)
T 3cok_A          150 NIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-------  220 (278)
T ss_dssp             CEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------
T ss_pred             CEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-------
Confidence            579999999987643221  12234689999999999888889999999999999999999999853221100       


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            .........       ..+......+.+++.+||+.||.+|||+.|++++
T Consensus       221 ------~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          221 ------LNKVVLADY-------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             ---------CCSSCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ------HHHHhhccc-------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence                  001110000       0011223467889999999999999999999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.80  E-value=2.2e-20  Score=125.55  Aligned_cols=118  Identities=23%  Similarity=0.286  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC---CCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS---NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~---~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.....   .......|++.|+|||.+.   ...++.++|||||||+++++++|..||....... .+..
T Consensus       155 ~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~  230 (322)
T 2ycf_A          155 LIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKD  230 (322)
T ss_dssp             CEEECCCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHH
T ss_pred             eEEEccCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHH
Confidence            4899999999876432   1223456899999999863   4468899999999999999999999985422211 1111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .........         ...     ........+.+++.+||+.||++|||+.|++++
T Consensus       231 ~~~~~~~~~---------~~~-----~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          231 QITSGKYNF---------IPE-----VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHHTCCCC---------CHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhCcccc---------Cch-----hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            111111000         000     001234567889999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.80  E-value=1.1e-20  Score=126.61  Aligned_cols=126  Identities=18%  Similarity=0.165  Sum_probs=83.8

Q ss_pred             ceEecccccceeccCCCCC-------cccccccccccccCcCccCCCC---ccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDGS-------MTQTMTMATIGYMAPEYGSNGI---VSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-------~~~~~~~g~~~~~~pe~~~~~~---~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .+||+|||++.........       .......|++.|+|||.+.+..   ++.++||||||++++++++|..||.....
T Consensus       172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  251 (317)
T 2buj_A          172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ  251 (317)
T ss_dssp             CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred             CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence            5799999998865321100       0112345789999999987543   68899999999999999999999743211


Q ss_pred             CccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           72 GKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..........            ....     .+........+.+++.+||+.||.+|||+.||+++|+.+...
T Consensus       252 ~~~~~~~~~~------------~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          252 KGDSVALAVQ------------NQLS-----IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             TTSCHHHHHH------------CC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             ccchhhHHhh------------ccCC-----CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            1111111100            0000     001112335688899999999999999999999999987643

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.80  E-value=2e-20  Score=126.82  Aligned_cols=130  Identities=19%  Similarity=0.183  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-Cccc-cccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSI-KCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~-~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++......    ......|++.|+|||.+.+. .++. ++||||+|++++++++|..||.............
T Consensus       190 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i  265 (348)
T 2pml_X          190 RVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI  265 (348)
T ss_dssp             CEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHH
T ss_pred             cEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            5799999999876432    23445789999999999876 5666 8999999999999999999986422211111111


Q ss_pred             hhhhc--cchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESL--PDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....  +.......... ... ............+.+++.+||+.||.+|||+.|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          266 RTKNIEYPLDRNHFLYPL-TNK-KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             TSCCCCCCCSSSSSTTTT-CC---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hccCcCCccchhhhhccc-ccc-ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11000  00000000000 000 0000012234568899999999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.80  E-value=4.3e-21  Score=128.62  Aligned_cols=133  Identities=14%  Similarity=0.154  Sum_probs=76.6

Q ss_pred             ceEecccccceeccCCCC-----CcccccccccccccCcCccCC-----CCccccccchhhhHHHHHHHhcCCCCCccCC
Q 043099            2 VAHVSDFGISKLLGEGDG-----SMTQTMTMATIGYMAPEYGSN-----GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFT   71 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-----~~~~~~~~g~~~~~~pe~~~~-----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~   71 (153)
                      .+||+|||+++.......     ........|++.|+|||.+.+     ..++.++||||+||+++++++|..||.....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            389999999986542211     111223468999999998864     3578899999999999999999999864332


Q ss_pred             CccchHHh--hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           72 GKTNLRNW--VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        72 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ........  ...........+.........   .........+.+++.+||+.||.+|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEGKYEFPD---KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHCCCCCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ccccccccccchhHHHHHHHHHhccCcccCc---hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            21111000  000000000111111000000   0001234568899999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.80  E-value=8e-21  Score=131.51  Aligned_cols=119  Identities=16%  Similarity=0.207  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC----ccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI----VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~----~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||+++...... .......+||+.|+|||++.+..    ++.++|||||||++++|++|..||.....     .
T Consensus       206 ~ikL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~  279 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----V  279 (410)
T ss_dssp             CEEECCCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----H
T ss_pred             CEEEeccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----h
Confidence            58999999998765332 22233567999999999887654    78999999999999999999999853111     0


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQ--RICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  137 (153)
                      ..        ...+....   ....++........+.+++.+||..+|.+  ||++.|++++
T Consensus       280 ~~--------~~~i~~~~---~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          280 GT--------YSKIMNHK---NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HH--------HHHHHTHH---HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             hH--------HHHHHhcc---ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            00        01111100   00001111123356788999999989988  9999999986

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=1.4e-20  Score=128.06  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||++++|++|..||.....  .   ..  
T Consensus       159 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~---~~--  229 (353)
T 2i0e_A          159 HIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--D---EL--  229 (353)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HH--
T ss_pred             cEEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--H---HH--
Confidence            57999999998643221  123445799999999999888899999999999999999999999853111  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||..+|.+||+     +.+++++
T Consensus       230 ------~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          230 ------FQSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             ------HHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             ------HHHHHhCCC-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence                  111111110       011123456788999999999999995     5777765

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.80  E-value=4.3e-21  Score=131.24  Aligned_cols=130  Identities=20%  Similarity=0.195  Sum_probs=71.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....||+.|+|||++.+ ..++.++||||+||+++++++|..||...... ..+....
T Consensus       170 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~  243 (367)
T 2fst_X          170 ELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLIL  243 (367)
T ss_dssp             CEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred             CEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            5899999999875322     234578999999998876 57899999999999999999999998532210 1111111


Q ss_pred             hh---hccchhhhhcccc-------chh-hhhcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEVVDTN-------LVR-EEQNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~~~~~-------~~~-~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .....+..+....       +.. ....+. ........+.+++.+||..||.+|||+.|++++
T Consensus       244 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          244 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            10   0000000000000       000 000000 001223567899999999999999999999976

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.80  E-value=6.4e-21  Score=128.15  Aligned_cols=106  Identities=19%  Similarity=0.186  Sum_probs=77.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......    .....|++.|+|||.+.+..+ +.++||||||++++++++|..||...       ....
T Consensus       188 ~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~~~  256 (320)
T 3a99_A          188 ELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EEII  256 (320)
T ss_dssp             EEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHHH
T ss_pred             CEEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hhhh
Confidence            58999999998765322    233468999999998876554 67899999999999999999997431       0000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                  .....       .+......+.+++.+||+.+|.+|||+.||+++
T Consensus       257 ------------~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          257 ------------RGQVF-------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             ------------HCCCC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------------ccccc-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        00000       001123467889999999999999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.80  E-value=1.7e-20  Score=126.01  Aligned_cols=111  Identities=20%  Similarity=0.218  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     ....+||+.|+|||++.+..++.++|+||+||+++++++|..||.....     ...  
T Consensus       144 ~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~--  211 (318)
T 1fot_A          144 HIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKT--  211 (318)
T ss_dssp             CEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH--
T ss_pred             CEEEeecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHH--
Confidence            5799999999876422     2335789999999999888899999999999999999999999853111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ...+......       .+......+.+++.+||..+|.+||     +++|++++
T Consensus       212 ------~~~i~~~~~~-------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          212 ------YEKILNAELR-------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             ------HHHHHHCCCC-------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ------HHHHHhCCCC-------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence                  1111111100       0112234678899999999999999     89999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=8.2e-21  Score=129.32  Aligned_cols=120  Identities=21%  Similarity=0.225  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.+.... ........||+.|+|||.+.+.  .++.++|||||||+++++++|..||........ ....
T Consensus       197 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~  274 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEI  274 (355)
T ss_dssp             CEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHH
T ss_pred             cEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHH
Confidence            58999999998764322 2223345789999999998753  478899999999999999999999853222111 1111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAKL  138 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~l  138 (153)
                      ..        ......       ...+......+.+++.+||+.||.+||     ++.|++++.
T Consensus       275 ~~--------~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          275 SR--------RILKSE-------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             HH--------HHHHCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             HH--------HHhccC-------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            10        000000       001122334678899999999999999     999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.80  E-value=4.9e-21  Score=130.50  Aligned_cols=129  Identities=19%  Similarity=0.250  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....    ......|++.|+|||.+.+..++.++||||+||+++++++|..||.......  ......
T Consensus       170 ~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~  243 (360)
T 3eqc_A          170 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFG  243 (360)
T ss_dssp             CEEECCCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC
T ss_pred             CEEEEECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhc
Confidence            5799999999765321    1233478999999999988889999999999999999999999985422110  000000


Q ss_pred             hh---------------------------ccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 043099           82 ES---------------------------LPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDA  134 (153)
Q Consensus        82 ~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  134 (153)
                      ..                           .........+.......... ........+.+++.+||+.||.+|||+.|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  322 (360)
T 3eqc_A          244 CQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQL  322 (360)
T ss_dssp             ------------------------------CCCHHHHHHHHHHSCCCCC-CTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             ccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCC-CcccccHHHHHHHHHHhhcChhhCCCHHHH
Confidence            00                           00000000000000000000 001134568899999999999999999999


Q ss_pred             HHH
Q 043099          135 AAK  137 (153)
Q Consensus       135 l~~  137 (153)
                      +++
T Consensus       323 l~h  325 (360)
T 3eqc_A          323 MVH  325 (360)
T ss_dssp             HTS
T ss_pred             hhC
Confidence            987

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.80  E-value=1.8e-20  Score=123.92  Aligned_cols=112  Identities=19%  Similarity=0.154  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++......    ......|++.|+|||.+.+..++.++||||+|++++++++|..||......     ..  
T Consensus       152 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~--  220 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSL----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ET--  220 (284)
T ss_dssp             CEEECCCTTCEECSSS----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH--
T ss_pred             CEEEecccccccCccc----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HH--
Confidence            4799999999765432    223456899999999998888999999999999999999999998532110     00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||+.+|.+|||+.|++++
T Consensus       221 ------~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          221 ------HRRIVNVDL-------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             ------HHHHHTTCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             ------HHHHhcccc-------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence                  000110000       0011223467889999999999999999999986

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.80  E-value=1.6e-20  Score=127.71  Aligned_cols=111  Identities=17%  Similarity=0.113  Sum_probs=80.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....     ....+||+.|+|||++.+..++.++||||+||+++++++|..||.....     ...  
T Consensus       179 ~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~--  246 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQI--  246 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH--
T ss_pred             CEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHH--
Confidence            5799999999876432     2335789999999999888899999999999999999999999853110     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||+.||.+||+     +.|++++
T Consensus       247 ------~~~i~~~~~-------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          247 ------YEKIVSGKV-------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             ------HHHHHHCCC-------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ------HHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence                  011111110       011123346788999999999999998     8888875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.80  E-value=1.5e-20  Score=125.28  Aligned_cols=117  Identities=17%  Similarity=0.249  Sum_probs=82.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......|++.|+|||.+.+..++.++||||||++++++++|..|+.....  ........
T Consensus       157 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~  232 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIP  232 (303)
T ss_dssp             CEEECCCTTCEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred             CEEEeecccceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhh
Confidence            57999999998765332  123345789999999999888899999999999999999999999753211  00000000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...        ....         +......+.+++.+||+.+|.+|||+.|++++..
T Consensus       233 ~~~--------~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  273 (303)
T 3a7i_A          233 KNN--------PPTL---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF  273 (303)
T ss_dssp             HSC--------CCCC---------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred             cCC--------CCCC---------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence            000        0000         0112345788999999999999999999998743

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.80  E-value=5.7e-21  Score=129.64  Aligned_cols=114  Identities=23%  Similarity=0.248  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||+++++++|..||.....  ....    
T Consensus       156 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~----  227 (345)
T 1xjd_A          156 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELF----  227 (345)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             CEEEeEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHH----
Confidence            57999999998643221  123446799999999999988899999999999999999999999853111  0000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT-DAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~~  137 (153)
                             ..+....     ..+  +......+.+++.+||..+|++||++. +++++
T Consensus       228 -------~~i~~~~-----~~~--p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          228 -------HSIRMDN-----PFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             -------HHHHHCC-----CCC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             -------HHHHhCC-----CCC--CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence                   0000000     000  111234678899999999999999997 77643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.79  E-value=2e-21  Score=128.06  Aligned_cols=117  Identities=18%  Similarity=0.188  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||||++++++++|..||.....  ........
T Consensus       154 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~  229 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIR  229 (279)
T ss_dssp             CEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred             CEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHh
Confidence            57999999998764322  122334689999999999888899999999999999999999999753211  01111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      .           .....      .+......+.+++.+||+.+|.+|||+.||++++.
T Consensus       230 ~-----------~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          230 E-----------GKFRR------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             H-----------TCCCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             h-----------ccccc------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            0           00000      01123356788999999999999999999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.79  E-value=2.9e-20  Score=123.96  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC--ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI--VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~--~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||++................|++.|+|||.+.+..  ++.++||||+|++++++++|..||....     ....
T Consensus       147 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~  221 (305)
T 2wtk_C          147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKL  221 (305)
T ss_dssp             CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHH
T ss_pred             cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHH
Confidence            57999999998765332222334456899999999887643  4678999999999999999999985311     1111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..        .+....       ...+......+.+++.+||+.||.+|||+.|++++
T Consensus       222 ~~--------~i~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          222 FE--------NIGKGS-------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HH--------HHHHCC-------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HH--------HHhcCC-------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            00        000000       00111233467789999999999999999999986

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.79  E-value=2.8e-20  Score=126.28  Aligned_cols=123  Identities=15%  Similarity=0.189  Sum_probs=79.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||+++++++|..||.............. 
T Consensus       148 ~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~-  224 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-  224 (345)
T ss_dssp             CEEECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH-
T ss_pred             CEEEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH-
Confidence            58999999998643221  123445799999999999988899999999999999999999999853211110000000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM------TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~evl~~  137 (153)
                         ......+.....       ..+......+.+++.+||+.||.+||++      .|++++
T Consensus       225 ---~~~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          225 ---DYLFQVILEKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             ---HHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             ---HHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence               000000111100       0112234567889999999999999995      677665

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.79  E-value=1.9e-20  Score=136.67  Aligned_cols=114  Identities=18%  Similarity=0.233  Sum_probs=81.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++......  ......+||+.|+|||++.+..++.++|+|||||+++||++|..||.....     ..   
T Consensus       480 ~ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~---  549 (674)
T 3pfq_A          480 HIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DE---  549 (674)
T ss_dssp             CEEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH---
T ss_pred             cEEEeecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HH---
Confidence            58999999998643222  123456799999999999988999999999999999999999999853111     00   


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                           ....+.....       ..+.....++.+++.+||+.||.+||++     .||+++
T Consensus       550 -----~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          550 -----LFQSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             -----HHHHHHSSCC-------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             -----HHHHHHhCCC-------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence                 0111111111       0112234568889999999999999997     777654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.79  E-value=1.2e-20  Score=125.20  Aligned_cols=117  Identities=26%  Similarity=0.331  Sum_probs=77.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+.  .++.++||||||++++++++|..||........   ..
T Consensus       161 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~  235 (295)
T 2clq_A          161 VLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AM  235 (295)
T ss_dssp             CEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HH
T ss_pred             CEEEeecccccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HH
Confidence            57999999998764321  112344689999999988654  378899999999999999999999853211100   00


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....    . .....         ..+......+.+++.+||+.+|.+|||+.|++++
T Consensus       236 ~~~~----~-~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          236 FKVG----M-FKVHP---------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             HHHH----H-HCCCC---------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             Hhhc----c-ccccc---------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000    0 00000         0112234567889999999999999999999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.79  E-value=2e-20  Score=126.14  Aligned_cols=114  Identities=18%  Similarity=0.182  Sum_probs=76.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|+|||.+.+..++.++||||+|++++++++|..||.....     ...  
T Consensus       159 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~--  229 (327)
T 3a62_A          159 HVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKT--  229 (327)
T ss_dssp             CEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHH--
T ss_pred             cEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHH--
Confidence            57999999998643221  122345789999999999888899999999999999999999999853211     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ...+.....       ..+......+.+++.+||..+|.+||     ++.|++++
T Consensus       230 ------~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          230 ------IDKILKCKL-------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             ------HHHHHHTCC-------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             ------HHHHHhCCC-------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence                  011111100       01112335678899999999999999     78888876

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.79  E-value=1.1e-20  Score=131.72  Aligned_cols=119  Identities=18%  Similarity=0.239  Sum_probs=79.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+++...... .......+||+.|+|||++.     ...++.++||||+||++++|++|..||.....     
T Consensus       213 ~vkL~DFGla~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-----  286 (437)
T 4aw2_A          213 HIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----  286 (437)
T ss_dssp             CEEECCCTTCEECCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----
T ss_pred             CEEEcchhhhhhcccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-----
Confidence            58999999998765432 22234457999999999886     44689999999999999999999999853111     


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchh-hHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSA-KLDCLLSIMYLALDCCMESPEQ--RICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~--Rps~~evl~~  137 (153)
                      ...        ...+....   ....++. .......+.+++.+||..+|++  ||+++|++++
T Consensus       287 ~~~--------~~~i~~~~---~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          287 VET--------YGKIMNHK---ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHH--------HHHHHTHH---HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hHH--------HHhhhhcc---ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            000        00111000   0000000 0113346778999999888888  9999999876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.79  E-value=3.2e-20  Score=124.78  Aligned_cols=132  Identities=20%  Similarity=0.187  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....   .......|++.|+|||.+.+..++.++||||||++++++++|..||...... ..+.....
T Consensus       158 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~  233 (326)
T 1blx_A          158 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD  233 (326)
T ss_dssp             CEEECSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred             CEEEecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHH
Confidence            5799999999875422   1233456899999999998888999999999999999999999998532211 11111111


Q ss_pred             hhc---cchhhhhcc-c--cch--hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESL---PDRLTEVVD-T--NLV--REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~---~~~~~~~~~-~--~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   ...+..... .  ...  ...............+.+++.+||+.+|.+|||+.|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            000   000000000 0  000  0000000112234567889999999999999999999965

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.79  E-value=2.6e-20  Score=127.51  Aligned_cols=130  Identities=16%  Similarity=0.137  Sum_probs=77.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....||+.|+|||.+.+ ..++.++||||+||+++++++|..||...... ..+....
T Consensus       182 ~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~  255 (371)
T 4exu_A          182 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQIL  255 (371)
T ss_dssp             CEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred             CEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence            5899999999865322     233468999999998876 57899999999999999999999998542211 0111111


Q ss_pred             hhh-cc-chhhhhcccc--------c-hhhhhc-chhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES-LP-DRLTEVVDTN--------L-VREEQN-FSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~-~~-~~~~~~~~~~--------~-~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ... .+ ..........        . ...... ..........+.+++.+||+.||.+|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            100 00 0000000000        0 000000 00011234678899999999999999999999986

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=2e-20  Score=123.89  Aligned_cols=116  Identities=21%  Similarity=0.214  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+ .++.++||||+|++++++++|..||.....  ........
T Consensus       162 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~  235 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVE  235 (287)
T ss_dssp             CEEECSTTGGGTBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred             cEEEeccCcceeecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence            58999999998764332   1233468899999998876 588999999999999999999999753211  00100000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .......   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       236 -----------~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          236 -----------TGKYAFD---LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             -----------HCCCCCC---SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -----------cCCCCCC---chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence                       0000000   00111233567889999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=1.6e-20  Score=134.38  Aligned_cols=117  Identities=21%  Similarity=0.279  Sum_probs=82.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......   .....+||+.|+|||++.+..++.++||||+||++++|++|..||........ ......
T Consensus       324 ~vKL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~  399 (576)
T 2acx_A          324 HIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVER  399 (576)
T ss_dssp             CEEECCCTTCEECCTTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHH
T ss_pred             CeEEEecccceecccCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHH
Confidence            58999999998865432   22345799999999999888899999999999999999999999864222111 110000


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                               .+    ......+  +......+.+++.+||+.||.+||     ++.||+++
T Consensus       400 ---------~i----~~~~~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          400 ---------LV----KEVPEEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             ---------HH----HHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             ---------Hh----hcccccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                     00    0000000  112335678899999999999999     78999876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.78  E-value=3e-20  Score=122.73  Aligned_cols=108  Identities=13%  Similarity=0.095  Sum_probs=76.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.+.......      ...|++.|+|||.+.+. .++.++|||||||+++++++|..++...    ...    
T Consensus       172 ~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~----  237 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQW----  237 (289)
T ss_dssp             CEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHH----
T ss_pred             EEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHH----
Confidence            57999999998864322      23589999999998765 5678999999999999999988764321    001    


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                              ...........      +......+.+++.+||+.||.+|||+.|++++
T Consensus       238 --------~~~~~~~~~~~------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          238 --------HEIRQGRLPRI------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             --------HHHHTTCCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             --------HHHHcCCCCCC------CcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence                    11111111000      11123467889999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=2.1e-20  Score=128.10  Aligned_cols=109  Identities=20%  Similarity=0.168  Sum_probs=76.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+||++++|++|..||.....     ...  
T Consensus       177 ~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~--  247 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEM--  247 (373)
T ss_dssp             CEEECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHH--
T ss_pred             CEEEeeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHH--
Confidence            57999999998643221  123446799999999999988899999999999999999999999853111     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT  132 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  132 (153)
                            ...+......       .+......+.+++.+||+.||.+||++.
T Consensus       248 ------~~~i~~~~~~-------~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          248 ------YDNILNKPLQ-------LKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             ------HHHHHHSCCC-------CCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             ------HHHHHhcccC-------CCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence                  1111111100       0112234678899999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.6e-20  Score=126.36  Aligned_cols=116  Identities=19%  Similarity=0.246  Sum_probs=71.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++.......  .......|++.|+|||.+.     +..++.++|||||||+++++++|..||.....    .
T Consensus       167 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~  240 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----M  240 (326)
T ss_dssp             CEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH----H
T ss_pred             CEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH----H
Confidence            57999999998764321  1223446899999999886     44688999999999999999999999743211    0


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....      ..........        .......+.+++.+||..+|.+|||+.|++++
T Consensus       241 ~~~~~------~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          241 RALFL------IPRNPAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHHHH------HHHSCCCCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHH------hhcCccccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            00000      0000000000        01123467889999999999999999999885

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.78  E-value=3.1e-20  Score=126.65  Aligned_cols=132  Identities=16%  Similarity=0.103  Sum_probs=74.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......   ......|++.|+|||.+.+ ..++.++||||+||+++++++|..||...... .......
T Consensus       172 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~  247 (362)
T 3pg1_A          172 DITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIV  247 (362)
T ss_dssp             CEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred             CEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            47999999998654322   2334578999999998876 57899999999999999999999998542210 0111111


Q ss_pred             hhhccc-----------hhhhhccccchhhhh--cchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPD-----------RLTEVVDTNLVREEQ--NFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ......           ...............  ...........+.+++.+||+.||.+|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            100000           000000000000000  000111224568899999999999999999999976

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.78  E-value=1.6e-20  Score=126.88  Aligned_cols=114  Identities=18%  Similarity=0.208  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......|++.|++||.+.+..++.++||||||++++++++|..||.....     .... 
T Consensus       179 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~-  250 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETY-  250 (335)
T ss_dssp             CEEECCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-
T ss_pred             CEEEeeccCceecccCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHH-
Confidence            58999999998764322  123345689999999999888899999999999999999999999853211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+.....       ..+......+.+++.+||+.||++|||+.|++++
T Consensus       251 -------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          251 -------LRIKKNEY-------SIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             -------HHHHHTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             -------HHHhcCCC-------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   00000000       0011223457789999999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.78  E-value=2.2e-20  Score=124.08  Aligned_cols=115  Identities=17%  Similarity=0.198  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......  .......|++.|+|||.+.+..++.++||||+|++++++++|..||.....     .... 
T Consensus       153 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~-  224 (294)
T 2rku_A          153 EVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETY-  224 (294)
T ss_dssp             CEEECCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-
T ss_pred             CEEEEeccCceecccCc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHH-
Confidence            57999999998764322  123345689999999999888899999999999999999999999853211     0000 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKL  138 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l  138 (153)
                             ........       ..+......+.+++.+||+.+|++|||+.|++++-
T Consensus       225 -------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~  267 (294)
T 2rku_A          225 -------LRIKKNEY-------SIPKHINPVAASLIQKMLQTDPTARPTINELLNDE  267 (294)
T ss_dssp             -------HHHHTTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             -------HHHhhccC-------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence                   00000000       00112234677899999999999999999999863

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.78  E-value=3.2e-20  Score=128.55  Aligned_cols=118  Identities=19%  Similarity=0.241  Sum_probs=78.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-------CCCccccccchhhhHHHHHHHhcCCCCCccCCCcc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-------NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKT   74 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-------~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~   74 (153)
                      ++||+|||+++...... .......+||+.|+|||++.       ...++.++|+|||||++++|++|..||.....   
T Consensus       200 ~vkL~DFGla~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---  275 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST---  275 (412)
T ss_dssp             CEEECCCTTCEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---
T ss_pred             CEEEeechhheeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH---
Confidence            58999999998865432 22233457999999999886       34688999999999999999999999853111   


Q ss_pred             chHHhhhhhccchhhhhccccchhhhhcch-hhHHHHHHHHHHHhhccccCCCCC---CCHHHHHHH
Q 043099           75 NLRNWVSESLPDRLTEVVDTNLVREEQNFS-AKLDCLLSIMYLALDCCMESPEQR---ICMTDAAAK  137 (153)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~R---ps~~evl~~  137 (153)
                        ...        ...+....   .....+ .+......+.+++.+||. +|.+|   |+++|++++
T Consensus       276 --~~~--------~~~i~~~~---~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          276 --AET--------YGKIVHYK---EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             --HHH--------HHHHHTHH---HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             --HHH--------HHHHHhcc---cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence              000        01111000   000000 011234568889999999 99998   589998875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.78  E-value=5.4e-20  Score=121.09  Aligned_cols=113  Identities=21%  Similarity=0.311  Sum_probs=71.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+..+ +.++||||+|++++++++|..||.....  .......
T Consensus       149 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~  223 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKI  223 (276)
T ss_dssp             CEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred             CEEEeecccccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHh
Confidence            57999999998764332   2233468999999999887654 6889999999999999999999753111  0000000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..           ..       ...+......+.+++.+||+.+|.+|||+.|++++
T Consensus       224 ~~-----------~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          224 RG-----------GV-------FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HH-----------CC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hc-----------Cc-------ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            00           00       00011123457789999999999999999999986

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.78  E-value=3.6e-20  Score=131.98  Aligned_cols=118  Identities=18%  Similarity=0.216  Sum_probs=81.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.+....  ......+||+.|+|||++.+..++.++|+||+||++++|++|..||....... .......
T Consensus       327 ~vkL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~  403 (543)
T 3c4z_A          327 NVRISDLGLAVELKAGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ  403 (543)
T ss_dssp             CEEECCCTTCEECCTTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHH
T ss_pred             CEEEeecceeeeccCCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHH
Confidence            58999999999865432  12234579999999999998889999999999999999999999985422111 1111110


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICM-----TDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~evl~~  137 (153)
                              .+.....       ..+......+.+++.+||+.+|.+||++     .+++++
T Consensus       404 --------~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          404 --------RVLEQAV-------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             --------HHHHCCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             --------HHhhccc-------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence                    0111000       0112234567889999999999999964     677754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.78  E-value=9.2e-21  Score=126.22  Aligned_cols=117  Identities=17%  Similarity=0.194  Sum_probs=75.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCcc-----CCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYG-----SNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~-----~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||++......  ........|++.|+|||.+     .+..++.++||||||++++++++|..|+......    
T Consensus       155 ~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----  228 (302)
T 2j7t_A          155 DIRLADFGVSAKNLKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----  228 (302)
T ss_dssp             CEEECCCHHHHHHHHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred             CEEEEECCCCcccccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH----
Confidence            4799999997643211  0112234689999999987     3557889999999999999999999997532110    


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                       ....        ......    ......+......+.+++.+||+.+|.+|||+.|++++
T Consensus       229 -~~~~--------~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          229 -RVLL--------KIAKSD----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             -HHHH--------HHHHSC----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             -HHHH--------HHhccC----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence             0000        000000    00001112233467889999999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.78  E-value=3.5e-20  Score=125.86  Aligned_cols=135  Identities=21%  Similarity=0.156  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCc--------ccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM--------TQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~--------~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      .+||+|||+++.........        ......|++.|+|||.+.+ ..++.++||||+||+++++++|..||......
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  229 (353)
T 2b9h_A          150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR  229 (353)
T ss_dssp             CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            58999999998765321110        1123468999999997654 57899999999999999999999998542211


Q ss_pred             ccchHHhhhh-hcc--ch-hhhhccccchh---------hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           73 KTNLRNWVSE-SLP--DR-LTEVVDTNLVR---------EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        73 ~~~~~~~~~~-~~~--~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      . .+...... +.+  .. ...........         ..............+.+++.+||+.||++|||+.|++++
T Consensus       230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          230 H-QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             H-HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             H-HHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0 00000000 000  00 00000000000         000000011234567899999999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.78  E-value=2.3e-20  Score=124.21  Aligned_cols=126  Identities=23%  Similarity=0.287  Sum_probs=76.1

Q ss_pred             ceEecccccceeccCCCC---CcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            2 VAHVSDFGISKLLGEGDG---SMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~---~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .+||+|||++........   ........|++.|+|||.+.+ ..++.++||||+|++++++++|..||........ ..
T Consensus       159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~  237 (303)
T 2vwi_A          159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LM  237 (303)
T ss_dssp             CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HH
T ss_pred             CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HH
Confidence            579999999986643211   112234568999999998865 4688999999999999999999999854221110 10


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..................         ........+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          238 LTLQNDPPSLETGVQDKE---------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             HHHTSSCCCTTC-----C---------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhccCCCccccccccch---------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            000000000000000000         001123467889999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.77  E-value=6.1e-20  Score=122.03  Aligned_cols=117  Identities=20%  Similarity=0.201  Sum_probs=78.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC------CCCccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS------NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      .+||+|||++.......   ......|++.|+|||.+.      ...++.++||||+|++++++++|..|+.....  ..
T Consensus       162 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~  236 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--ML  236 (298)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH
T ss_pred             cEEEecccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HH
Confidence            57999999998765332   233456899999999874      34688899999999999999999999743111  00


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....           ........   .+........+.+++.+||+.+|.+|||+.|++++
T Consensus       237 ~~~~~-----------~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (298)
T 1phk_A          237 MLRMI-----------MSGNYQFG---SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  284 (298)
T ss_dssp             HHHHH-----------HHTCCCCC---TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHH-----------hcCCcccC---cccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence            00000           00000000   00011234568899999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.77  E-value=9.6e-20  Score=121.88  Aligned_cols=106  Identities=22%  Similarity=0.277  Sum_probs=77.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++......    .....|+..|+|||.+.+..+ +.++||||+|++++++++|..||...       ... 
T Consensus       178 ~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~-  245 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QEI-  245 (312)
T ss_dssp             EEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHH-
T ss_pred             eEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HHH-
Confidence            47999999998765332    234468999999998876555 45899999999999999999997431       000 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                 .....       ..+......+.+++.+||+.+|++|||+.|++++
T Consensus       246 -----------~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 -----------LEAEL-------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -----------HHTCC-------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -----------hhhcc-------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                       00000       0011223457889999999999999999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.77  E-value=1.2e-19  Score=123.39  Aligned_cols=130  Identities=18%  Similarity=0.162  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.....     .....|++.|+|||.+.+ ..++.++||||+||+++++++|..||...... ..+....
T Consensus       164 ~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~  237 (353)
T 3coi_A          164 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQIL  237 (353)
T ss_dssp             CEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHH
T ss_pred             cEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence            5899999999865322     233468999999998876 57889999999999999999999998542211 0111111


Q ss_pred             hhh-cc--chhhhhccc-------cch-hhhhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SES-LP--DRLTEVVDT-------NLV-REEQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~-~~--~~~~~~~~~-------~~~-~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ... .+  .......+.       .+. .....+ .........+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            100 00  000000000       000 000000 0112334678899999999999999999999876

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.77  E-value=1.4e-19  Score=121.22  Aligned_cols=135  Identities=13%  Similarity=0.129  Sum_probs=79.7

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++....... ........++..|+|||.+.+ ..++.++||||||++++++++|..||...... ......
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~  237 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLI  237 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence            589999999987643211 112233467889999998765 57889999999999999999999998542211 001111


Q ss_pred             hhhhcc---chhhhhc-------cccchhhh-hcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLP---DRLTEVV-------DTNLVREE-QNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~---~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ......   .......       ........ ............+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            110000   0000000       00000000 0000011234678899999999999999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.75  E-value=3.3e-19  Score=129.15  Aligned_cols=127  Identities=17%  Similarity=0.160  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++.......   ......|++.|+|||.+.+..++.++||||+|++++++++|..||.....    ...+..
T Consensus       162 ~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~  234 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHG  234 (676)
T ss_dssp             EEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSST
T ss_pred             eEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhh
Confidence            47999999998765332   23345789999999999888999999999999999999999999853211    000000


Q ss_pred             hhccchh-----hhhccccch--hh-hhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 043099           82 ESLPDRL-----TEVVDTNLV--RE-EQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAA  135 (153)
Q Consensus        82 ~~~~~~~-----~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl  135 (153)
                      .......     .........  .. .............+.+++.+||..||.+|||+.|++
T Consensus       235 ~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          235 KVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             TCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            0000000     000000000  00 000011123556788999999999999999998854

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.73  E-value=1e-18  Score=116.18  Aligned_cols=118  Identities=17%  Similarity=0.160  Sum_probs=70.3

Q ss_pred             ceEecccccceeccCCCC------------CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDG------------SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~------------~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      .+||+|||+++.......            ........|++.|+|||.+.+. .++.++||||+||+++++++   |+..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            479999999987642210            1122345689999999998764 68899999999999999997   4321


Q ss_pred             cCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           69 MFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...    .....        ........ ..+..  .+......+.+++.+||+.||.+|||+.|++++
T Consensus       231 ~~~----~~~~~--------~~~~~~~~-~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          231 GME----RVNIL--------KKLRSVSI-EFPPD--FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHH----HHHHH--------HHHHSTTC-CCCTT--CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             chh----HHHHH--------Hhcccccc-ccCcc--ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            000    00000        00000000 00000  112234457889999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.69  E-value=1.3e-17  Score=121.98  Aligned_cols=111  Identities=20%  Similarity=0.237  Sum_probs=78.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....      ....||+.|++||.+.+. ++.++|||||||+++++++|..|+......         
T Consensus       219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------  282 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD---------  282 (681)
T ss_dssp             CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS---------
T ss_pred             cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc---------
Confidence            4799999999876432      334689999999988653 488999999999999999998775321100         


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-HHHHHHHHHHHHHHh
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-MTDAAAKLKKIREKF  145 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~evl~~l~~~~~~~  145 (153)
                           ..        ...    .........+.+++.+||+.||.+||+ ++++.+.|..+.+..
T Consensus       283 -----~~--------~~~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          283 -----GL--------PED----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             -----SC--------CTT----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             -----cc--------ccc----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence                 00        000    001123356788999999999999996 666777777766553

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.61  E-value=3e-16  Score=104.45  Aligned_cols=102  Identities=18%  Similarity=0.182  Sum_probs=63.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||++....                        +..++.++||||+||+++++++|..||........      .
T Consensus       158 ~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~  207 (299)
T 3m2w_A          158 ILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------S  207 (299)
T ss_dssp             CEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------
T ss_pred             cEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------h
Confidence            47899999887542                        12467889999999999999999999853211100      0


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                         ...............   ..........+.+++.+||+.||.+|||+.|++++-.
T Consensus       208 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~  259 (299)
T 3m2w_A          208 ---PGMKTRIRMGQYEFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW  259 (299)
T ss_dssp             ---CCSCCSSCTTCCSSC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             ---HHHHHHHhhccccCC---chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence               000000000000000   0001223457889999999999999999999998633

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.51  E-value=6.7e-15  Score=99.42  Aligned_cols=111  Identities=14%  Similarity=0.108  Sum_probs=71.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHH-HHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL-LMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~-~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.....       ..+||+.|+|||++.+.. +.++||||++++ ..+++.|..||...        .+.
T Consensus       220 ~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~  283 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDG-------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWL  283 (336)
T ss_dssp             EEEECCCTTCBEEETT-------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHH
T ss_pred             eEEEeeccccEecCCC-------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhh
Confidence            6899999999976432       247899999999998765 889999998777 56677788776320        000


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHH-HH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAA-AK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl-~~  137 (153)
                      ...    ........................++.+++.+||+.|     |++|++ ++
T Consensus       284 ~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          284 HYL----TDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HHH----HHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             hHH----HHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence            000    0011100000001111123456778999999999976     999988 53

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.39  E-value=1.2e-13  Score=91.40  Aligned_cols=90  Identities=10%  Similarity=-0.003  Sum_probs=57.7

Q ss_pred             CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhcc
Q 043099           42 IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC  121 (153)
Q Consensus        42 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  121 (153)
                      .++.++|||||||+++++++|..||...........          ............   .......+..+.+++.+||
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP----------AERDTAGQPIEP---ADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE----------CCBCTTSCBCCH---HHHCTTSCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH----------HHHHhccCCCCh---hhcccCCCHHHHHHHHHHc
Confidence            378899999999999999999999864222110000          000000000000   0001223456889999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHh
Q 043099          122 MESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus       122 ~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      +.||.+| |+.|+++.|+++....
T Consensus       245 ~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          245 QGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             CTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             ccCCccC-CHHHHHHHHHHHhccC
Confidence            9999999 9999999999987654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.58  E-value=1.4e-09  Score=78.40  Aligned_cols=58  Identities=16%  Similarity=-0.104  Sum_probs=29.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTK   62 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g   62 (153)
                      ++||+|||+|+......  ......+||+.|++||.+.+ .+...+|+||+|++++++..+
T Consensus       377 ~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             CEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             CEEEeecccCeeCCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccc
Confidence            58999999999765432  12344689999999999976 566789999999987665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.91  E-value=3.3e-07  Score=65.78  Aligned_cols=65  Identities=14%  Similarity=0.084  Sum_probs=47.5

Q ss_pred             ceEecccccceeccCCCCCc-----ccccccccccccCcCccCC--CCccccccchhhhHHHHHHHhcCCCC
Q 043099            2 VAHVSDFGISKLLGEGDGSM-----TQTMTMATIGYMAPEYGSN--GIVSIKCDVYSYGVLLMEAFTKKKPT   66 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~   66 (153)
                      .+||+|||+++.........     ......||+.|+|||++..  ..|+..+|+|+..+-..+.+.++.++
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            47999999999875422111     1235679999999999876  46788899999988877776655443

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=86.22  E-value=0.68  Score=29.48  Aligned_cols=34  Identities=15%  Similarity=0.096  Sum_probs=21.1

Q ss_pred             cccCcCccCCCCccccccchhhhHHHHHHHhcCCC
Q 043099           31 GYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP   65 (153)
Q Consensus        31 ~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p   65 (153)
                      .+.+||... ...+.+.-|||+|+++|..+--..|
T Consensus       102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence            356776653 2445778899999999998864444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-23
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-18
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-16
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-15
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-13
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-12
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.001

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (222), Expect = 4e-23
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 17/146 (11%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY---GSNGIVSIKCDVYSYGVLLM 57
           +   + DFG++ +     GS        +I +MAPE          S + DVY++G++L 
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200

Query: 58  EAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
           E  T + P + +      +       L   L++V                +C  ++  L 
Sbjct: 201 ELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS--------------NCPKAMKRLM 246

Query: 118 LDCCMESPEQRICMTDAAAKLKKIRE 143
            +C  +  ++R       A ++ +  
Sbjct: 247 AECLKKKRDERPLFPQILASIELLAR 272

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 4e-19
 Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 20/150 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMT--MATIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
               V+DFG+++ + + +       T     + +MA E       + K DV+S+GVLL E
Sbjct: 167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226

Query: 59  AFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLAL 118
             T+  P         N  +                  + + +       C   +  + L
Sbjct: 227 LMTRGAP----PYPDVNTFDIT--------------VYLLQGRRLLQPEYCPDPLYEVML 268

Query: 119 DCCMESPEQRICMTDAAAKLKKIREKFLDD 148
            C     E R   ++  +++  I   F+ +
Sbjct: 269 KCWHPKAEMRPSFSELVSRISAIFSTFIGE 298

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 6e-19
 Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMT--MATIGYMAPEYGSNGI------VSIKCDVYSY 52
               ++D G++        ++       + T  YMAPE   + I         + D+Y+ 
Sbjct: 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204

Query: 53  GVLLMEAFTKKKPTNEMFTGKTNLRNWVSE--SLPDRLTEVVDTNLVREEQNFSAKLDCL 110
           G++  E   +          +    + V    S+ +    V +  L     N     + L
Sbjct: 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 264

Query: 111 LSIMYLALDCCMESPEQRICMTDAAAKLKKIRE 143
             +  +  +C   +   R+        L ++ +
Sbjct: 265 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.8 bits (188), Expect = 4e-18
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 18/143 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           MV  ++DFG+S+ +   D           I +M PE       + + DV++YGV+L E F
Sbjct: 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 236

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +                 +   +  + +  V D N++   +N   +L        L   C
Sbjct: 237 SYGLQP------------YYGMAHEEVIYYVRDGNILACPENCPLEL------YNLMRLC 278

Query: 121 CMESPEQRICMTDAAAKLKKIRE 143
             + P  R         L+++ E
Sbjct: 279 WSKLPADRPSFCSIHRILQRMCE 301

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 4e-18
 Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 19/144 (13%)

Query: 1   MVAHVSDFGISKLLGEG-DGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
           +V  VSDFG+S++L +  + + T +     I + APE  S    +   DV+S+G+++ E 
Sbjct: 147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 206

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
            T  +      +    ++                   + +       +DC  +I  L + 
Sbjct: 207 MTYGERPYWELSNHEVMK------------------AINDGFRLPTPMDCPSAIYQLMMQ 248

Query: 120 CCMESPEQRICMTDAAAKLKKIRE 143
           C  +   +R    D  + L K+  
Sbjct: 249 CWQQERARRPKFADIVSILDKLIR 272

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 9e-18
 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 19/143 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  VSDFG+++ + +   + +       + + +PE  S    S K DV+S+GVL+ E F
Sbjct: 138 QVIKVSDFGMTRFVLDDQYTSSTGT-KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           ++ K   E  +    +   +S         +  T++ +                 +   C
Sbjct: 197 SEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQ-----------------IMNHC 238

Query: 121 CMESPEQRICMTDAAAKLKKIRE 143
             E PE R   +    +L +I E
Sbjct: 239 WKERPEDRPAFSRLLRQLAEIAE 261

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 19/150 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
             A +SDFG+SK L   +            + + APE  +    S K DV+S+GVL+ EA
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           F+  +     + G                +EV    ++ + +       C   +  L   
Sbjct: 204 FSYGQK---PYRGMKG-------------SEVTA--MLEKGERMGCPAGCPREMYDLMNL 245

Query: 120 CCMESPEQRICMTDAAAKLKKIREKFLDDG 149
           C     E R        +L+      +++G
Sbjct: 246 CWTYDVENRPGFAAVELRLRNYYYDVVNEG 275

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.5 bits (177), Expect = 1e-16
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 21/146 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMT---MATIGYMAPEYGSNGIVSIKCDVYSYGVLLM 57
           +V  VSDFG+S+ L +     T T        I + APE       +   DV+SYG+++ 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 224

Query: 58  EAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
           E  +  +     +   TN              +V++   + ++      +DC  ++  L 
Sbjct: 225 EVMSYGER---PYWDMTNQ-------------DVIN--AIEQDYRLPPPMDCPSALHQLM 266

Query: 118 LDCCMESPEQRICMTDAAAKLKKIRE 143
           LDC  +    R         L K+  
Sbjct: 267 LDCWQKDRNHRPKFGQIVNTLDKMIR 292

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 1e-16
 Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 19/148 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
             A +SDFG+SK LG  D   T        + + APE  +    S + DV+SYGV + EA
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
            +  +     +                          + + +      +C   +  L  D
Sbjct: 206 LSYGQKP---YKKMKGPEVM---------------AFIEQGKRMECPPECPPELYALMSD 247

Query: 120 CCMESPEQRICMTDAAAKLKKIREKFLD 147
           C +   E R        +++        
Sbjct: 248 CWIYKWEDRPDFLTVEQRMRACYYSLAS 275

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 1e-16
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +V  V+DFG+++L+ E +    +      I + APE    G  +IK DV+S+G+LL E  
Sbjct: 150 LVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           TK +     + G  N              EV+D   V          +C  S+  L   C
Sbjct: 209 TKGRV---PYPGMVN-------------REVLD--QVERGYRMPCPPECPESLHDLMCQC 250

Query: 121 CMESPEQRICMTDAAAKLKKI 141
             + PE+R       A L+  
Sbjct: 251 WRKEPEERPTFEYLQAFLEDY 271

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 3e-16
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 22/134 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + D G++ L      S  + + + T  +MAPE           DVY++G+ ++E  
Sbjct: 152 GSVKIGDLGLATLK---RASFAKAV-IGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMA 206

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T + P +E        R   S   P    +V    +                   +   C
Sbjct: 207 TSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE-----------------IIEGC 249

Query: 121 CMESPEQRICMTDA 134
             ++ ++R  + D 
Sbjct: 250 IRQNKDERYSIKDL 263

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 3e-16
 Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 19/141 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           +   ++DFG+++L+ E +    +      I + APE  + G  +IK DV+S+G+LL E  
Sbjct: 146 LSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T  +      T    ++N        R                    +C   +  L   C
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPD------------------NCPEELYQLMRLC 246

Query: 121 CMESPEQRICMTDAAAKLKKI 141
             E PE R       + L+  
Sbjct: 247 WKERPEDRPTFDYLRSVLEDF 267

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 4e-16
 Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 19/141 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  VSDFG+S+ + + +   +   +   + +  PE       S K D++++GVL+ E +
Sbjct: 137 GVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +  K   E FT      + +++ L      +    +                   +   C
Sbjct: 196 SLGKMPYERFTNSETAEH-IAQGLRLYRPHLASEKVYT-----------------IMYSC 237

Query: 121 CMESPEQRICMTDAAAKLKKI 141
             E  ++R       + +  +
Sbjct: 238 WHEKADERPTFKILLSNILDV 258

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 7e-16
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 21/134 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG++++L   D S  +     T  YM+PE  +    + K D++S G LL E  
Sbjct: 151 QNVKLGDFGLARILNH-DTSFAKAFVG-TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 208

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
               P             + + S  +   ++ +    R    +S +L+ +++        
Sbjct: 209 ALMPP-------------FTAFSQKELAGKIREGKFRRIPYRYSDELNEIIT------RM 249

Query: 121 CMESPEQRICMTDA 134
                  R  + + 
Sbjct: 250 LNLKDYHRPSVEEI 263

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 9e-16
 Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 23/142 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA VSDFG++K       S TQ      + + APE       S K DV+S+G+LL E +
Sbjct: 140 NVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +  +        K  +         D                      C  ++  +  +C
Sbjct: 195 SFGRVPYPRIPLKDVVPRVEKGYKMDAPD------------------GCPPAVYEVMKNC 236

Query: 121 CMESPEQRICMTDAAAKLKKIR 142
                  R        +L+ I+
Sbjct: 237 WHLDAAMRPSFLQLREQLEHIK 258

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 1e-15
 Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 18/143 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               ++DFG++KLLG  +           I +MA E   + I + + DV+SYGV + E  
Sbjct: 148 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T        + G                +E+    ++ + +       C + +  + + C
Sbjct: 208 TFGSK---PYDGIPA-------------SEISS--ILEKGERLPQPPICTIDVYMIMVKC 249

Query: 121 CMESPEQRICMTDAAAKLKKIRE 143
            M   + R    +   +  K+  
Sbjct: 250 WMIDADSRPKFRELIIEFSKMAR 272

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 2e-15
 Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 19/144 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            +  V+DFG+S+L+  GD           I + APE  +    SIK DV+++GVLL E  
Sbjct: 152 HLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T        + G    + +                L+ ++        C   +  L   C
Sbjct: 211 TYGMS---PYPGIDLSQVY---------------ELLEKDYRMERPEGCPEKVYELMRAC 252

Query: 121 CMESPEQRICMTDAAAKLKKIREK 144
              +P  R    +     + + ++
Sbjct: 253 WQWNPSDRPSFAEIHQAFETMFQE 276

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 2e-15
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 17/139 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  + DFG+++ +      + +      + +MAPE    GI +IK DV+SYG+LL E F
Sbjct: 201 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 260

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +             N    +               +                   +   C
Sbjct: 261 SLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYI-----------------IMQSC 303

Query: 121 CMESPEQRICMTDAAAKLK 139
                 +R    +  + L 
Sbjct: 304 WAFDSRKRPSFPNLTSFLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 2e-15
 Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 17/141 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            +  + DFG+++ +      + +      + +MAPE   N + + + DV+SYG+ L E F
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +            +     + E       E     +                   +   C
Sbjct: 242 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTC 284

Query: 121 CMESPEQRICMTDAAAKLKKI 141
               P +R         ++K 
Sbjct: 285 WDADPLKRPTFKQIVQLIEKQ 305

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 3e-15
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 18/148 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG+++ + E D        +  + +M+PE   +G+ +   DV+S+GV+L E  
Sbjct: 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 229

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T  +   +  + +  LR  +   L D+     D                   +  L   C
Sbjct: 230 TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD------------------MLFELMRMC 271

Query: 121 CMESPEQRICMTDAAAKLKKIREKFLDD 148
              +P+ R    +  + +K+  E    +
Sbjct: 272 WQYNPKMRPSFLEIISSIKEEMEPGFRE 299

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 6e-15
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 21/144 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            VA ++DFG+S+     +  + +TM    + +MA E  +  + +   DV+SYGVLL E  
Sbjct: 164 YVAKIADFGLSRG---QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +        + G T    +                 + +       L+C   +  L   C
Sbjct: 221 SLGGT---PYCGMTCAELY---------------EKLPQGYRLEKPLNCDDEVYDLMRQC 262

Query: 121 CMESPEQRICMTDAAAKLKKIREK 144
             E P +R         L ++ E+
Sbjct: 263 WREKPYERPSFAQILVSLNRMLEE 286

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 8e-14
 Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 18/143 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
            +  + DFG+ + L + D              + APE       S   D + +GV L E 
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
           FT  +     + G    +              +   + +E +      DC   I  + + 
Sbjct: 208 FTYGQE---PWIGLNGSQ--------------ILHKIDKEGERLPRPEDCPQDIYNVMVQ 250

Query: 120 CCMESPEQRICMTDAAAKLKKIR 142
           C    PE R         L + +
Sbjct: 251 CWAHKPEDRPTFVALRDFLLEAQ 273

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG+S  L     SM  +  + T  YM+PE       S++ D++S G+ L+E  
Sbjct: 142 GEIKLCDFGVSGQL---IDSMANSF-VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197

Query: 61  TKKKP 65
             + P
Sbjct: 198 VGRYP 202

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 1e-13
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  + DFG+++ + +    + +      + +MAPE   + + +I+ DV+S+GVLL E F
Sbjct: 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 230

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           +                  + E    R  +     + +                   LDC
Sbjct: 231 SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ-----------------TMLDC 273

Query: 121 CMESPEQRICMTDAAAKLKKIRE 143
               P QR   ++    L  + +
Sbjct: 274 WHGEPSQRPTFSELVEHLGNLLQ 296

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 3e-13
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 18/141 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
            V  ++DFG+++ +   D     T     + +MAPE   + I + + DV+S+GVLL E F
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T        + G      +                L++E        +C   +  +  DC
Sbjct: 232 TLGGS---PYPGVPVEELF---------------KLLKEGHRMDKPSNCTNELYMMMRDC 273

Query: 121 CMESPEQRICMTDAAAKLKKI 141
               P QR         L +I
Sbjct: 274 WHAVPSQRPTFKQLVEDLDRI 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 6e-13
 Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 19/144 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG+S+ + +          +  I +MAPE  +    +   DV+ +GV + E  
Sbjct: 145 DCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
                  +       +    +                    N    L  L+        C
Sbjct: 204 MHGVKPFQGVKNNDVIGRIENGERLPM------------PPNCPPTLYSLM------TKC 245

Query: 121 CMESPEQRICMTDAAAKLKKIREK 144
               P +R   T+  A+L  I E+
Sbjct: 246 WAYDPSRRPRFTELKAQLSTILEE 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 1e-12
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 18/135 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEA 59
               +SDFG++ +    +          T+ Y+APE        +   DV+S G++L   
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
              + P ++         +W  +       + +D+  +                  L   
Sbjct: 200 LAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA-----------------LLHK 242

Query: 120 CCMESPEQRICMTDA 134
             +E+P  RI + D 
Sbjct: 243 ILVENPSARITIPDI 257

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 4e-12
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 24/130 (18%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG S        S   T+   T+ Y+ PE     +   K D++S GVL  E    K 
Sbjct: 147 IADFGWSV---HAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 202

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P             + + +  +    +        +   +     L+S           +
Sbjct: 203 P-------------FEANTYQETYKRISRVEFTFPD-FVTEGARDLIS------RLLKHN 242

Query: 125 PEQRICMTDA 134
           P QR  + + 
Sbjct: 243 PSQRPMLREV 252

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.0 bits (142), Expect = 9e-12
 Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 18/144 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMA-TIGYMAPEYGSNGIVSIKCDVYSYGVLLMEA 59
               V DFGI++ + +   S+TQT  +  T  Y++PE      V  + DVYS G +L E 
Sbjct: 148 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 207

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
            T + P           ++   + +P               +  SA LD ++    LA +
Sbjct: 208 LTGEPPFTGDSPVSVAYQHVREDPIPPSA----------RHEGLSADLDAVVLKA-LAKN 256

Query: 120 CCMESPEQRI-CMTDAAAKLKKIR 142
                PE R     +  A L ++ 
Sbjct: 257 -----PENRYQTAAEMRADLVRVH 275

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 25/132 (18%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP 65
           +DFG    +       +    + T  +MAPE  +      K D++S G++ +E    + P
Sbjct: 158 TDFGFCAQITPEQSKRS--TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Query: 66  TNEMFTGKTN---LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCM 122
               +  +     L    +   P+          ++  +  SA     L+   L +D   
Sbjct: 216 ----YLNENPLRALYLIATNGTPE----------LQNPEKLSAIFRDFLNRC-LDMD--- 257

Query: 123 ESPEQRICMTDA 134
              E+R    + 
Sbjct: 258 --VEKRGSAKEL 267

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 20/148 (13%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
           M   ++DFG +K+L            + T  Y++PE  +        D+++ G ++ +  
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
               P             + + +      +++       E  F  K   L+  + L LD 
Sbjct: 205 AGLPP-------------FRAGNEYLIFQKIIKLEYDFPE-KFFPKARDLVEKL-LVLD- 248

Query: 121 CMESPEQRICMTDAAAKLKKIREKFLDD 148
                 +R+   +           F + 
Sbjct: 249 ----ATKRLGCEEMEGYGPLKAHPFFES 272

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 57.8 bits (139), Expect = 3e-11
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 19/130 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + DFG++  L   D   +  +T  T  + APE      V    D++S GVL     +   
Sbjct: 167 LIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 223

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P    F G+ +      +     +               S      +  + L  D     
Sbjct: 224 P----FGGEND------DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKL-LLAD----- 267

Query: 125 PEQRICMTDA 134
           P  R+ +  A
Sbjct: 268 PNTRMTIHQA 277

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 7e-11
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 25/148 (16%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + +FG ++ L  GD             Y APE   + +VS   D++S G L+    +   
Sbjct: 145 IIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P    F  +TN      + + + +     T      +  S +    +  + L  +     
Sbjct: 202 P----FLAETN------QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRL-LVKE----- 245

Query: 125 PEQRICMTDAAA------KLKKIREKFL 146
            + R+  ++A        K++++  K +
Sbjct: 246 RKSRMTASEALQHPWLKQKIERVSTKVI 273

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.0 bits (134), Expect = 1e-10
 Identities = 18/154 (11%), Positives = 38/154 (24%), Gaps = 21/154 (13%)

Query: 4   HVSDFGISKLLGEGDGSMTQTMTMA-----TIGYMAPEYGSNGIVSIKCDVYSYGVLLME 58
           +V DFG+ K   +                 T  YM+         S + D+ + G + M 
Sbjct: 146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFM- 204

Query: 59  AFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKL-DCLLSIMYLA 117
                        G    +   + +   +   + +       +   A   +     M   
Sbjct: 205 ---------YFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYM--- 252

Query: 118 LDCCMESPEQRICMTDAAAKLKKI--REKFLDDG 149
                 + +             K+  R    +D 
Sbjct: 253 HYARNLAFDATPDYDYLQGLFSKVLERLNTTEDE 286

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 19/131 (14%)

Query: 4   HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            + DFG++  +  G+          T  ++APE  +   + ++ D++S GV+     +  
Sbjct: 157 KIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213

Query: 64  KPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCME 123
            P    F G T             ++ V          N SA     +  + L  D    
Sbjct: 214 SP----FLGDTKQETL------ANVSAVNYEFEDEYFSNTSALAKDFIRRL-LVKD---- 258

Query: 124 SPEQRICMTDA 134
            P++R+ + D+
Sbjct: 259 -PKKRMTIQDS 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 19/130 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           + DFG++  L   +      +T AT  + APE      V    D+++ GVL     +   
Sbjct: 170 IIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 226

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P    F G+ +L           +             + S +    +  + L  +     
Sbjct: 227 P----FAGEDDLETL------QNVKRCDWEFDEDAFSSVSPEAKDFIKNL-LQKE----- 270

Query: 125 PEQRICMTDA 134
           P +R+ + DA
Sbjct: 271 PRKRLTVHDA 280

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 23/137 (16%), Positives = 38/137 (27%), Gaps = 27/137 (19%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY---GSNGIVSIKCDVYSYGVLLM 57
            +  + DFG + ++            + T  +MAPE       G    K DV+S G+  +
Sbjct: 152 GLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 58  EAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLA 117
           E   +K P   M      L +      P   +                            
Sbjct: 206 ELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRN-----------------FV 247

Query: 118 LDCCMESPEQRICMTDA 134
             C  + P+ R      
Sbjct: 248 DSCLQKIPQDRPTSEVL 264

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 19/130 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           +SDFG+SK+   G      +    T GY+APE  +    S   D +S GV+         
Sbjct: 151 ISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 207

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P    F  + +        L +++ +           + S      +  + +  D     
Sbjct: 208 P----FYDEND------AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL-MEKD----- 251

Query: 125 PEQRICMTDA 134
           PE+R     A
Sbjct: 252 PEKRFTCEQA 261

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 4   HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            ++DFG+ K    GD          T  Y+APE       +   D +S+GVLL E    +
Sbjct: 143 KIADFGMCKENMLGDAKTN--TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200

Query: 64  KP-----TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVRE-EQNFSAKLDCL 110
            P       E+F        +    L     +++    VRE E+    + D  
Sbjct: 201 SPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 253

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 4e-10
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 28/141 (19%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY-----GSNGIVSIKCDVYSYGVL 55
               ++DFG+S             +      +MAPE        +     K DV+S G+ 
Sbjct: 147 GDIKLADFGVSAKNTRTIQRRDSFIGT--PYWMAPEVVMCETSKDRPYDYKADVWSLGIT 204

Query: 56  LMEAFTKKKPTNEMFTGKTNLR--NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSI 113
           L+E    + P          +R    +++S P  L          +   +S+     L  
Sbjct: 205 LIEMAEIEPP----HHELNPMRVLLKIAKSEPPTL---------AQPSRWSSNFKDFLKK 251

Query: 114 MYLALDCCMESPEQRICMTDA 134
             L  +      + R   +  
Sbjct: 252 C-LEKN-----VDARWTTSQL 266

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 6e-10
 Identities = 17/156 (10%), Positives = 41/156 (26%), Gaps = 19/156 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVL 55
            + ++ DFG++K   +                 T  Y +         S + D+ S G +
Sbjct: 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 202

Query: 56  LMEAFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMY 115
           LM              G    +   + +   +   + +  +    +              
Sbjct: 203 LM----------YFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK--GYPSEFAT 250

Query: 116 LALDCCMESPEQRICMTDAAAKLKKI--REKFLDDG 149
               C     + +   +      + +  R+ F  D 
Sbjct: 251 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 286

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 6e-10
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 8/90 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEY-GSNGIVSIKCDVYSYGVLLMEA 59
               + DFG   LL +       T    T  Y  PE+   +        V+S G+LL + 
Sbjct: 148 GELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203

Query: 60  FTKKKP---TNEMFTGKTNLRNWVSESLPD 86
                P     E+  G+   R  VS     
Sbjct: 204 VCGDIPFEHDEEIIRGQVFFRQRVSSECQH 233

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 9e-10
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 15/133 (11%)

Query: 2   VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           +  ++DFG +K     +   + T    T  Y+APE          CD++S GV++     
Sbjct: 152 ILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 208

Query: 62  KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
              P    F     L   +S  +  R+          E    S ++  L+  + L  +  
Sbjct: 209 GYPP----FYSNHGL--AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL-LKTE-- 259

Query: 122 MESPEQRICMTDA 134
              P QR+ +T+ 
Sbjct: 260 ---PTQRMTITEF 269

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.9 bits (121), Expect = 7e-09
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               ++DFG +K + +            T  Y+APE  S    +   D +S+G+L+ E  
Sbjct: 141 GHIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195

Query: 61  TKKKPTNEM---------FTGKTNLRNWVSESLPD 86
               P  +             +     + +E + D
Sbjct: 196 AGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKD 230

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 6   SDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP 65
           +DFG++++       M  T  + T+ Y APE       +   D++S G +  E F +K  
Sbjct: 158 ADFGLARIY---SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 214

Query: 66  ---TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD--- 119
              ++++      L         D   +V         ++       +  I  L  D   
Sbjct: 215 FRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 274

Query: 120 -CCMESPEQRICMTDA 134
            C   +P +RI    A
Sbjct: 275 KCLTFNPAKRISAYSA 290

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 5   VSDFGISKLLGEGDGSMTQTMT---MATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT 61
           ++DFG S  L  G+       T   +A          ++     + D++S GV++     
Sbjct: 151 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 210

Query: 62  KKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCC 121
              P    F  +  +       +   +          E  ++S  +  L+S   L +   
Sbjct: 211 GSPP----FWHRKQML------MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF-LVVQ-- 257

Query: 122 MESPEQRICMTDA 134
              P++R    +A
Sbjct: 258 ---PQKRYTAEEA 267

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 1e-07
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 19/147 (12%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-YGSNGIVSIKCDVYSYGVLLMEA 59
            V  ++DFG++K  G  +     T  + T  Y APE      +  +  D+++ G +L E 
Sbjct: 137 GVLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 194

Query: 60  FTKKKPTNEMFTGKTN----------LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDC 109
             +         G ++          L     E  PD  +                 +  
Sbjct: 195 LLRVPF----LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS 250

Query: 110 LLSIMYLAL--DCCMESPEQRICMTDA 134
                 L L     + +P  RI  T A
Sbjct: 251 AAGDDLLDLIQGLFLFNPCARITATQA 277

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-YGSNGIVSIKCDVYSYGVLLMEA 59
               ++DFG+++  G    + T  +    + Y APE        S   D++S G +  E 
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEVVT--LWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
            T++             R + +   PD +     T++   + +F        S +   LD
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256

Query: 120 ---------CCMESPEQRICMTDA 134
                         P +RI    A
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA 280

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.4 bits (109), Expect = 2e-07
 Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 12/144 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE-YGSNGIVSIKCDVYSYGVLLMEA 59
               ++DFG+++  G      T  +    + Y AP+    +   S   D++S G +  E 
Sbjct: 137 GELKIADFGLARAFGIPVRKYTHEIVT--LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
                    +      +R +     P+       T L + + NF+             LD
Sbjct: 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254

Query: 120 ---------CCMESPEQRICMTDA 134
                         P QRI    A
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQA 278

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 2e-07
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 23/153 (15%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMT--MATIGYMAPEYGSNGI-VSIKCDVYSYGVLLM 57
            V  ++DFG+++       S     T  + T+ Y  PE            D++  G ++ 
Sbjct: 154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 213

Query: 58  EAFTKKKPTNEMFTGKTNLRNW-----VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLS 112
           E +T+         G T          +  S+   +   VD   + E+          + 
Sbjct: 214 EMWTRSPI----MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVK 269

Query: 113 IMY-------LALD----CCMESPEQRICMTDA 134
                      ALD      +  P QRI   DA
Sbjct: 270 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 4e-07
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 22/133 (16%)

Query: 5   VSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK 64
           ++DFG+ K       +M       T  Y+APE   +       D +  GV++ E    + 
Sbjct: 146 ITDFGLCKEGISDGATMK--TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

Query: 65  PTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMES 124
           P    F  +            +RL E++    +R  +  S +   LL+ + L  D     
Sbjct: 204 P----FYNQD----------HERLFELILMEEIRFPRTLSPEAKSLLAGL-LKKD----- 243

Query: 125 PEQRICMTDAAAK 137
           P+QR+    + AK
Sbjct: 244 PKQRLGGGPSDAK 256

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 9e-07
 Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 20/141 (14%)

Query: 3   AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPE--YGSNGIVSIKCDVYSYGVLLMEAF 60
             ++DFG+SK     +          TI YMAP+   G +       D +S GVL+ E  
Sbjct: 168 VVLTDFGLSKEFVADETERAYDF-CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 226

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
           T   P    FT          ++    ++  +  +     Q  SA    L+  + L  D 
Sbjct: 227 TGASP----FTVDGE------KNSQAEISRRILKSEPPYPQEMSALAKDLIQRL-LMKD- 274

Query: 121 CMESPEQRI-CMTDAAAKLKK 140
               P++R+ C    A ++K+
Sbjct: 275 ----PKKRLGCGPRDADEIKE 291

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEA 59
               +SD G++    +         ++ T GYMAPE    G+      D +S G +L + 
Sbjct: 144 GHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 199

Query: 60  FTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALD 119
                P  +  T   +  + ++ ++   L +           +FS +L  LL  + L  D
Sbjct: 200 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPD-----------SFSPELRSLLEGL-LQRD 247

Query: 120 CCMESPEQRI-CMTDAAAKLKK 140
                  +R+ C+   A ++K+
Sbjct: 248 -----VNRRLGCLGRGAQEVKE 264

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-06
 Identities = 22/144 (15%), Positives = 43/144 (29%), Gaps = 19/144 (13%)

Query: 4   HVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK 63
            + DFG +K L    G    +   +               +   DV+S G +L E    +
Sbjct: 163 KLCDFGSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

Query: 64  KPTNEMFTGKTN----------LRNWVSESLPDRLTEVVDTNLVR-EEQNFSAKLDCLLS 112
                 F G +           L     E + +      +    + +   ++        
Sbjct: 221 PI----FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTP 276

Query: 113 IMYLAL-DCCME-SPEQRICMTDA 134
              +AL    +E +P  R+   +A
Sbjct: 277 PEAIALCSRLLEYTPTARLTPLEA 300

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 4e-06
 Identities = 27/147 (18%), Positives = 43/147 (29%), Gaps = 13/147 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMT-MATIGYMAPEYGSNGIVSI-KCDVYSYGVLLME 58
               + DFG++++              +AT  Y APE   N        D++S G +L E
Sbjct: 146 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 205

Query: 59  AFTKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYL-- 116
             + +                     P +       NL       S      +    L  
Sbjct: 206 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP 265

Query: 117 -----ALD----CCMESPEQRICMTDA 134
                ALD        +P +RI +  A
Sbjct: 266 NADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (96), Expect = 1e-05
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 26/141 (18%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               V+DFG +K                T   +APE   +   +   D ++ GVL+ E  
Sbjct: 178 GYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 61  TKKKPTNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDC 120
               P    F              P ++ E + +  VR   +FS+ L  LL       + 
Sbjct: 233 AGYPP----FFADQ----------PIQIYEKIVSGKVRFPSHFSSDLKDLLR------NL 272

Query: 121 CMESPEQRI-CMTDAAAKLKK 140
                 +R   + +    +K 
Sbjct: 273 LQVDLTKRFGNLKNGVNDIKN 293

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 2e-05
 Identities = 12/65 (18%), Positives = 21/65 (32%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
              ++    I+ L          T ++ T  Y +PE           D++S   L+ E  
Sbjct: 164 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

Query: 61  TKKKP 65
           T    
Sbjct: 224 TGDFL 228

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 15/139 (10%)

Query: 7   DFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKP- 65
           DFG+++   +                      +    +   D++S G ++ E  T +   
Sbjct: 164 DFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

Query: 66  ----TNEMFTGKTNLRNWVSESLPDRLTEVVDTNLVREEQNFSAK--LDCLLSIMYLALD 119
                 +       L       L  +++     N ++           +  +    LA+D
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD 279

Query: 120 ----CCMESPEQRICMTDA 134
                 +   ++RI    A
Sbjct: 280 LLEKMLVLDSDKRITAAQA 298

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.001
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 1   MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAF 60
               + DFG+++  G        T  + T  Y APE           D++S G ++ E  
Sbjct: 156 CTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

Query: 61  TKKKPTNEMFTGKTNLRNW 79
             K      F G+  +  W
Sbjct: 213 RHKIL----FPGRDYIDQW 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.94
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.93
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.93
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.93
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.93
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.92
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.92
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.92
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.92
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.9
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.89
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.89
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.87
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.87
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.87
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.87
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.86
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.84
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.83
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.82
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.75
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	83.65
d1kq8a_	75	HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norv	83.15

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-30  Score=168.25  Aligned_cols=130  Identities=20%  Similarity=0.363  Sum_probs=85.3

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCC---CccccccchhhhHHHHHHHhcCCCCCccCCCccchH
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG---IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLR   77 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~---~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~   77 (153)
                      .++||+|||+|+...............||+.|+|||++.+.   .|+.++|||||||++||+++|..||....... ...
T Consensus       141 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~~  219 (276)
T d1uwha_         141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QII  219 (276)
T ss_dssp             SSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHH
T ss_pred             CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HHH
Confidence            36899999999876543333334456799999999988643   47899999999999999999999985421111 111


Q ss_pred             HhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           78 NWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .......       ..+....      .+...+..+.+++.+||+.+|++|||++||+++|+.+.+.
T Consensus       220 ~~~~~~~-------~~p~~~~------~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         220 FMVGRGY-------LSPDLSK------VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHTS-------CCCCGGG------SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHhcCC-------CCCcchh------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            1111110       0010000      1123445788999999999999999999999999998864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.3e-29  Score=163.61  Aligned_cols=125  Identities=22%  Similarity=0.347  Sum_probs=84.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcC-CCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK-KPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+...........+...||+.|+|||++.+..++.++|||||||+++||++|. .||..... ...+....
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~~~~~~~~  250 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRL  250 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHHHHH
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-HHHHHHHH
Confidence            68999999998765444333445567999999999998888999999999999999999865 56542111 11111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..+.                 ....+...+.++.+++.+||+.||++|||+.||+++|+++.+.
T Consensus       251 ~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         251 KEGT-----------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCC-----------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            1111                 0111122345688999999999999999999999999998654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.3e-28  Score=160.84  Aligned_cols=145  Identities=14%  Similarity=0.173  Sum_probs=91.5

Q ss_pred             CceEecccccceeccCCCCC--cccccccccccccCcCccCCC------CccccccchhhhHHHHHHHhcCCCCCccCCC
Q 043099            1 MVAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNG------IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTG   72 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~------~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~   72 (153)
                      +++||+|||+++........  .......||+.|+|||++.+.      .++.++|||||||++||+++|..|+......
T Consensus       145 ~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~  224 (303)
T d1vjya_         145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccc
Confidence            46899999999987644321  123456799999999987653      2677899999999999999998876432221


Q ss_pred             ccchHHhhhhhc-cch-hhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           73 KTNLRNWVSESL-PDR-LTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        73 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ............ ... ..........+..+......+....+.+++.+||+.||++|||+.||++.|+++.++-
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence            111111100000 000 1111111111111111122446677889999999999999999999999999998753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.5e-28  Score=161.22  Aligned_cols=128  Identities=23%  Similarity=0.360  Sum_probs=82.4

Q ss_pred             CceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+....... ........||+.|+|||.+.+..++.++|||||||++||++++..|+...... ......
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~~~~~  225 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKA  225 (283)
T ss_dssp             CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHH
T ss_pred             CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HHHHHH
Confidence            4689999999998654322 22233456899999999998889999999999999999999976654321111 111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFL  146 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~  146 (153)
                      +.           .. ..     .+.+...+..+.+++.+||+.+|++|||+.||++.|+++.+...
T Consensus       226 i~-----------~~-~~-----~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         226 IN-----------DG-FR-----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             HH-----------TT-CC-----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             Hh-----------cc-CC-----CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            11           00 00     11122344568899999999999999999999999999887643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.6e-29  Score=160.57  Aligned_cols=123  Identities=26%  Similarity=0.348  Sum_probs=76.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++...... ........||+.|+|||++.+..++.++|||||||++||++++..|+..... .......+.
T Consensus       139 ~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~~i~  216 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVEDIS  216 (263)
T ss_dssp             CEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHHHHH
T ss_pred             CeEecccchheeccCCC-ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHHHHH
Confidence            68999999998765432 2223345689999999999988999999999999999999985444322111 111111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      ....                 ...+..++..+.+++.+||+.+|++|||++||+++|++|.+
T Consensus       217 ~~~~-----------------~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         217 TGFR-----------------LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HTCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCC-----------------CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            1100                 00112234568899999999999999999999999999875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.2e-29  Score=166.20  Aligned_cols=120  Identities=23%  Similarity=0.377  Sum_probs=87.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||++ |..||...... ..+...+
T Consensus       202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~~~~~~  280 (325)
T d1rjba_         202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYKLI  280 (325)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHH
T ss_pred             eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH-HHHHHHH
Confidence            689999999998765443333445678999999999988899999999999999999997 89997532111 1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                      ...            ..     .+.+...+..+.+++.+||+.+|++|||++||+++|.
T Consensus       281 ~~~------------~~-----~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         281 QNG------------FK-----MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hcC------------CC-----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            111            00     1112233457889999999999999999999999985

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-28  Score=160.62  Aligned_cols=131  Identities=24%  Similarity=0.363  Sum_probs=94.7

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+|+.+...... .......||+.|+|||++.+..++.++|||||||++||+++ |..||....  .......
T Consensus       147 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~--~~~~~~~  224 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAF  224 (285)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHH
T ss_pred             ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC--HHHHHHH
Confidence            6899999999987643321 22234568899999999988889999999999999999997 899985321  1111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhhcCCC
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLDDGAA  151 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~~~~  151 (153)
                      +..+.                 ..+.+...+.++.+++.+||+.+|++|||+.+|++.|+.+...+.+....
T Consensus       225 i~~~~-----------------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~~~~  279 (285)
T d1u59a_         225 IEQGK-----------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG  279 (285)
T ss_dssp             HHTTC-----------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHcCC-----------------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhccch
Confidence            11110                 01112234467889999999999999999999999999988877655443

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2.5e-28  Score=161.13  Aligned_cols=126  Identities=24%  Similarity=0.406  Sum_probs=79.6

Q ss_pred             CceEecccccceeccCCCCCc---ccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccch
Q 043099            1 MVAHVSDFGISKLLGEGDGSM---TQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNL   76 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~---~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~   76 (153)
                      +++||+|||+|+.+.......   ......||+.|+|||.+.+..++.++|||||||++||+++ |..||.....  ..+
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~--~~~  242 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN--QDV  242 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHH
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH--HHH
Confidence            368999999999775432211   1123457899999999988889999999999999999997 8888753211  011


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      ...+.           .. .     ..+.+...+..+.+++.+||+.+|++|||+.||++.|+++.+..
T Consensus       243 ~~~i~-----------~~-~-----~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p  294 (299)
T d1jpaa_         243 INAIE-----------QD-Y-----RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP  294 (299)
T ss_dssp             HHHHH-----------TT-C-----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHH-----------cC-C-----CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence            11111           00 0     01112334567889999999999999999999999999987654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.3e-28  Score=162.70  Aligned_cols=123  Identities=25%  Similarity=0.366  Sum_probs=86.1

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCC-CCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK-PTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~-p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+...........+...|++.|+|||.+.+..++.++|||||||++||+++|.. |+....  .....  
T Consensus       177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~--~~e~~--  252 (301)
T d1lufa_         177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--HEEVI--  252 (301)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHH--
T ss_pred             CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC--HHHHH--
Confidence            3689999999987654333333445678899999999998899999999999999999999864 553211  01111  


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIR  142 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~  142 (153)
                               ..+......      +.+...+.++.+++.+||+.+|++||||.||++.|++|.
T Consensus       253 ---------~~v~~~~~~------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         253 ---------YYVRDGNIL------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             ---------HHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ---------HHHHcCCCC------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence                     111111111      112234457889999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.6e-28  Score=161.64  Aligned_cols=124  Identities=22%  Similarity=0.383  Sum_probs=86.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+...............||+.|+|||.+.+..++.++|||||||++||+++ |..||.....  ..+...+
T Consensus       149 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--~~~~~~i  226 (317)
T d1xkka_         149 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL  226 (317)
T ss_dssp             EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--GGHHHHH
T ss_pred             CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--HHHHHHH
Confidence            689999999998765443333344568999999999988889999999999999999998 7778743211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..+.                 ..+.+...+..+.+++.+||+.+|.+|||+.||+++|+.+.+.
T Consensus       227 ~~~~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         227 EKGE-----------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             HHTC-----------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HcCC-----------------CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence            1110                 0111223445688999999999999999999999999988654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.2e-28  Score=157.39  Aligned_cols=124  Identities=23%  Similarity=0.350  Sum_probs=86.7

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      +++||+|||+|+...... ........|++.|+|||++.+..++.++|||||||++||+++|..|+...... ......+
T Consensus       146 ~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~i  223 (272)
T d1qpca_         146 LSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNL  223 (272)
T ss_dssp             SCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHH
T ss_pred             cceeeccccceEEccCCc-cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHHH
Confidence            368999999999875432 22333456889999999998878999999999999999999966554321111 1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .           .. ..     ...+...+..+.+++.+||+.+|++|||++||++.|+.+..
T Consensus       224 ~-----------~~-~~-----~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         224 E-----------RG-YR-----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             H-----------TT-CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H-----------hc-CC-----CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            1           00 00     01112234568899999999999999999999999998754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.6e-28  Score=157.40  Aligned_cols=124  Identities=21%  Similarity=0.337  Sum_probs=79.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+.+.... ........||+.|+|||.+.+..++.++|||||||++|||++ |..|+.....  ......+
T Consensus       146 ~~Kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~--~~~~~~i  222 (273)
T d1mp8a_         146 CVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI  222 (273)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH
T ss_pred             cEEEccchhheeccCCc-ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence            58999999998765332 223334568999999999988889999999999999999997 7888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                      .           ....      .+.+...+..+.+++.+||+.||++|||+.||++.|+++.++.
T Consensus       223 ~-----------~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         223 E-----------NGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             H-----------TTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             H-----------cCCC------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            1           1100      0112234457889999999999999999999999999987764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-27  Score=157.26  Aligned_cols=117  Identities=15%  Similarity=0.170  Sum_probs=83.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.+....  ......+||+.|+|||++.+..++.++||||+||++++|++|..||...... ..+.....
T Consensus       154 ~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~~~~  230 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-RALYLIAT  230 (293)
T ss_dssp             CEEECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHH
T ss_pred             cEeeccchhheeecccc--ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH-HHHHHHHh
Confidence            58999999999875332  2334557999999999999988999999999999999999999998532110 00100111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..                .+....+......+.+++.+||+.||++|||+.|++++
T Consensus       231 ~~----------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         231 NG----------------TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HC----------------SCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CC----------------CCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00                00111122334568889999999999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.6e-28  Score=156.81  Aligned_cols=127  Identities=26%  Similarity=0.359  Sum_probs=89.1

Q ss_pred             ceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+|+.+...... .......||+.|+|||.+.+..++.++|||||||++||+++ |..||.....  ......
T Consensus       145 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~--~~~~~~  222 (277)
T d1xbba_         145 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM  222 (277)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH
T ss_pred             cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH--HHHHHH
Confidence            5799999999987544322 12234568999999999988889999999999999999997 8999853111  111111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      +..+           .      ..+.+...+..+.+++.+||+.||++|||++||+..|+.......+
T Consensus       223 i~~~-----------~------~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~  273 (277)
T d1xbba_         223 LEKG-----------E------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  273 (277)
T ss_dssp             HHTT-----------C------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHcC-----------C------CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCC
Confidence            1110           0      0111223445788999999999999999999999999887665543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.1e-28  Score=157.17  Aligned_cols=119  Identities=18%  Similarity=0.275  Sum_probs=82.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.+............+||+.|+|||++.+..+ +.++||||+||++++|++|..||..............
T Consensus       141 ~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~  220 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  220 (271)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH
T ss_pred             CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            589999999998754432333445689999999999887765 5789999999999999999999854322211111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....            .     ..........+.+++.+||+.||++|||++|++++
T Consensus       221 ~~~~------------~-----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         221 EKKT------------Y-----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             TTCT------------T-----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cCCC------------C-----CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1000            0     00011223456789999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-27  Score=154.76  Aligned_cols=114  Identities=18%  Similarity=0.303  Sum_probs=79.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.....    .....+||+.|+|||++.+ .++.++||||+||++++|++|..||........ +...+.
T Consensus       153 ~~Kl~DFGla~~~~~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-~~~~i~  226 (270)
T d1t4ha_         153 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVT  226 (270)
T ss_dssp             CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHT
T ss_pred             CEEEeecCcceeccCC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-HHHHHH
Confidence            5899999999864322    2334579999999998876 699999999999999999999999853211110 110100


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..            ....    ..+.....++.+++.+||+.||++|||++|++++
T Consensus       227 ~~------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         227 SG------------VKPA----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             TT------------CCCG----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cC------------CCCc----ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            00            0000    0011123457889999999999999999999874

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-27  Score=157.28  Aligned_cols=129  Identities=20%  Similarity=0.313  Sum_probs=90.8

Q ss_pred             CceEecccccceeccCCCCC--cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            1 MVAHVSDFGISKLLGEGDGS--MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      +.+||+|||+++........  .......||+.|+|||.+....++.++||||||++++|+++|..|+........ ...
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~-~~~  245 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITV  245 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHH
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH-HHH
Confidence            36899999999987543221  122335689999999998888899999999999999999998877643222111 111


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhhh
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKFLD  147 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~  147 (153)
                      .+..+..                 ...+...+..+.+++.+||+.||++|||+.||+++|+++.+.+..
T Consensus       246 ~i~~g~~-----------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         246 YLLQGRR-----------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             HHHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHcCCC-----------------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            1111100                 001122345688999999999999999999999999999987654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=8.3e-28  Score=157.82  Aligned_cols=124  Identities=21%  Similarity=0.313  Sum_probs=87.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+...... ........|++.|+|||++.+..++.++|||||||++||+++|..|+..... .......+.
T Consensus       153 ~~Kl~DFG~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~~~~~i~  230 (287)
T d1opja_         153 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLE  230 (287)
T ss_dssp             CEEECCCCCTTTCCSSS-SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHH
T ss_pred             cEEEccccceeecCCCC-ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHHHHHHHh
Confidence            68999999999765433 2233344688899999999888999999999999999999997766532111 011111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                                  ....     .+.+...+..+.+++.+||+.||++|||++||++.|+.+.++
T Consensus       231 ------------~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         231 ------------KDYR-----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             ------------TTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             ------------cCCC-----CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                        1111     111123345788999999999999999999999999887553

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-27  Score=153.72  Aligned_cols=120  Identities=18%  Similarity=0.322  Sum_probs=86.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++...... ........||+.|+|||.+.+..++.++|||||||++||+++ |..||.....  ..+...+
T Consensus       138 ~~kl~DfG~a~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~--~~~~~~i  214 (258)
T d1k2pa_         138 VVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SETAEHI  214 (258)
T ss_dssp             CEEECCCSSCCBCSSSS-CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHH
T ss_pred             cEEECcchhheeccCCC-ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH--HHHHHHH
Confidence            68999999998765433 223334568999999999988889999999999999999997 7888753211  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                      ...            ..     ...+...+..+.+++.+||+.+|++|||+.|++++|.+|
T Consensus       215 ~~~------------~~-----~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         215 AQG------------LR-----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HTT------------CC-----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HhC------------CC-----CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            110            00     011122345788999999999999999999999998643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-27  Score=153.46  Aligned_cols=112  Identities=20%  Similarity=0.210  Sum_probs=82.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.....    ......||+.|+|||++.+..++.++||||+||++++|++|+.||....     ..... 
T Consensus       144 ~~kl~DFG~a~~~~~~----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~-  213 (263)
T d2j4za1         144 ELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETY-  213 (263)
T ss_dssp             CEEECCCCSCSCCCCC----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHH-
T ss_pred             CEeecccceeeecCCC----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC-----HHHHH-
Confidence            5899999999876433    2334579999999999999889999999999999999999999985311     00010 


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+.....       ..+.....++.+++.+||+.||++|||++|++++
T Consensus       214 -------~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         214 -------KRISRVEF-------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             -------HHHHTTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -------HHHHcCCC-------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence                   11111100       0112234567889999999999999999999875

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=3.7e-27  Score=155.94  Aligned_cols=117  Identities=22%  Similarity=0.227  Sum_probs=71.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+......   .....+||+.|+|||++.+..++.++||||+||++++|++|..||.....  ....    
T Consensus       148 ~vkl~DFG~a~~~~~~~---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~----  218 (307)
T d1a06a_         148 KIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLF----  218 (307)
T ss_dssp             CEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHH----
T ss_pred             eEEEeccceeEEccCCC---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH--HHHH----
Confidence            58999999998764332   23345799999999999988899999999999999999999999853111  0010    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........   .+........+.+++.+||+.||++|||++|++++
T Consensus       219 -------~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         219 -------EQILKAEYEFD---SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             -------HHHHTTCCCCC---TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             -------HHHhccCCCCC---CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                   11111111000   01112234568899999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-27  Score=154.31  Aligned_cols=123  Identities=22%  Similarity=0.348  Sum_probs=84.2

Q ss_pred             CceEecccccceeccCCCCC-cccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHH
Q 043099            1 MVAHVSDFGISKLLGEGDGS-MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~   78 (153)
                      .++||+|||+++.+...... .......|+..|+|||.+.+..++.++|||||||++|||++ |..||.....  ...  
T Consensus       148 ~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~--~~~--  223 (273)
T d1u46a_         148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQI--  223 (273)
T ss_dssp             TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHH--
T ss_pred             cceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH--HHH--
Confidence            36899999999987544322 22334467889999999988889999999999999999997 8999753111  000  


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKI  141 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~  141 (153)
                               ...+......     .+.+...+..+.+++.+||+.||++|||+.||++.|++.
T Consensus       224 ---------~~~i~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         224 ---------LHKIDKEGER-----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             ---------HHHHHTSCCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------HHHHHhCCCC-----CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                     0111111110     111122345688999999999999999999999988875

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.9e-27  Score=154.75  Aligned_cols=115  Identities=17%  Similarity=0.200  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+....  .......||+.|+|||++.+..++.++|||||||++++|++|..||.....  ..+.    
T Consensus       152 ~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~----  223 (269)
T d2java1         152 NVKLGDFGLARILNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA----  223 (269)
T ss_dssp             CEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHH----
T ss_pred             cEEEeeccceeecccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHH----
Confidence            58999999999875332  123446799999999999888899999999999999999999999853111  1111    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                             ..+........      +.....++.+++.+||+.||++|||+.|++++
T Consensus       224 -------~~i~~~~~~~~------~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         224 -------GKIREGKFRRI------PYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             -------HHHHHTCCCCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -------HHHHcCCCCCC------CcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                   11111111110      11233468889999999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.1e-26  Score=150.16  Aligned_cols=126  Identities=17%  Similarity=0.288  Sum_probs=90.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++...............||+.|+|||.+.+..++.++|||||||+++||+++..|+.........+...+.
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~  262 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            57999999999876544444445568899999999998888999999999999999999855443322222222222222


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      .+.            ...     .+...+..+.+|+.+||+.||++|||++||+++|+++...
T Consensus       263 ~~~------------~~~-----~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         263 EGF------------RML-----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HTC------------CCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCC------------CCC-----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            111            100     1122345688999999999999999999999999987665

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.2e-27  Score=154.42  Aligned_cols=117  Identities=19%  Similarity=0.223  Sum_probs=80.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC-----CCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS-----NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~-----~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+|+.....  ........||+.|+|||++.     ...|+.++||||+||++++|++|..||...... ..+
T Consensus       148 ~~Kl~DFG~a~~~~~~--~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~-~~~  224 (288)
T d2jfla1         148 DIKLADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM-RVL  224 (288)
T ss_dssp             CEEECCCTTCEECHHH--HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG-GHH
T ss_pred             CEEEEechhhhccCCC--cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH-HHH
Confidence            5899999999875421  11233467999999999873     345889999999999999999999998532111 011


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .            .+...    ..+....+.....++.+++.+||+.||++|||+.|++++
T Consensus       225 ~------------~i~~~----~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         225 L------------KIAKS----EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             H------------HHHHS----CCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             H------------HHHcC----CCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1            11100    000111122334568899999999999999999999874

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=152.84  Aligned_cols=123  Identities=25%  Similarity=0.376  Sum_probs=88.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++...............|++.|+|||.+.+..|+.++|||||||++||+++ |..||.....  ......+
T Consensus       173 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~--~~~~~~i  250 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EELFKLL  250 (299)
T ss_dssp             CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH
T ss_pred             CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH--HHHHHHH
Confidence            579999999998765433333445678999999999988899999999999999999997 6777642111  1111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                      .           .. .     ....+...+..+.+++.+||+.+|.+|||+.||++.|++|..
T Consensus       251 ~-----------~~-~-----~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         251 K-----------EG-H-----RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             H-----------TT-C-----CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H-----------cC-C-----CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            1           00 0     001112234568899999999999999999999999998854

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8e-27  Score=153.04  Aligned_cols=118  Identities=13%  Similarity=0.188  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+............+||+.|+|||++.+..++.++||||+||++++|++|..||.....     ...  
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----~~~--  218 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----YLI--  218 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH--
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH-----HHH--
Confidence            5899999999987543323334456799999999999988999999999999999999999999853110     000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLK  139 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~  139 (153)
                            ...+.....     .+  +.....++.+++.+||+.||++|||++|++++-+
T Consensus       219 ------~~~i~~~~~-----~~--p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~  263 (288)
T d1uu3a_         219 ------FQKIIKLEY-----DF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP  263 (288)
T ss_dssp             ------HHHHHTTCC-----CC--CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred             ------HHHHHcCCC-----CC--CccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHH
Confidence                  011111110     00  1123346788999999999999999999866533

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.1e-27  Score=155.12  Aligned_cols=63  Identities=27%  Similarity=0.397  Sum_probs=53.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNE   68 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~   68 (153)
                      ++||+|||+|+.+...    .....+||+.|+|||++.+..|+.++||||+||+++||++|+.||..
T Consensus       143 ~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         143 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             CEEECCCCCCHHHHHH----TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             CEEEeeCCCccccCCC----ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            6899999999976422    23345899999999999998999999999999999999999999854

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-26  Score=152.92  Aligned_cols=122  Identities=26%  Similarity=0.352  Sum_probs=84.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCC-CCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKK-PTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~-p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+......   ......||..|+|||.+.+..++.++|||||||+++||++|.. |+.. .. ...+.   
T Consensus       165 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~-~~-~~~~~---  236 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MT-CAELY---  236 (309)
T ss_dssp             CEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT-CC-HHHHH---
T ss_pred             ceEEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCC-CC-HHHHH---
Confidence            57999999998754322   2233468999999999988889999999999999999999765 4422 11 11111   


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                              ..+... ..     ...+...+..+.+++.+||+.||++|||++||+++|+++.+..
T Consensus       237 --------~~i~~~-~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         237 --------EKLPQG-YR-----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             --------HHGGGT-CC-----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             --------HHHHhc-CC-----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence                    111110 00     1111234457889999999999999999999999999998754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-26  Score=153.28  Aligned_cols=124  Identities=23%  Similarity=0.367  Sum_probs=88.1

Q ss_pred             CceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcC-CCCCccCCCccchHHh
Q 043099            1 MVAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKK-KPTNEMFTGKTNLRNW   79 (153)
Q Consensus         1 ~~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~   79 (153)
                      +++||+|||+|+.+.............|++.|++||.+.+..++.++|||||||+++|+++|. .|+... .. .     
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~-~-----  242 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SN-E-----  242 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CH-H-----
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CH-H-----
Confidence            468999999998775443333344557899999999998888999999999999999999985 554321 10 0     


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIRE  143 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~  143 (153)
                            .....+......      ..+...+..+.+++.+||+.+|++|||++||++.|++..+
T Consensus       243 ------~~~~~i~~~~~~------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         243 ------QVLRFVMEGGLL------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             ------HHHHHHHTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ------HHHHHHHhCCCC------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                  001111111111      1112234578899999999999999999999999887644

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-25  Score=148.99  Aligned_cols=121  Identities=18%  Similarity=0.170  Sum_probs=83.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+......   ......||+.|+|||++.+..|+.++||||+||+++++++|..||........ ....  
T Consensus       152 ~~Kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~~--  225 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGM--  225 (335)
T ss_dssp             CEEECCCTTCEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------
T ss_pred             cccccccceeeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHHH--
Confidence            58999999999875432   23345799999999999988899999999999999999999999854221110 0000  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...........   ..+.......++.+++.+||+.||++|||+.|++++
T Consensus       226 ------~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         226 ------KTRIRMGQYEF---PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             --------CCCSCSSSC---CTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ------HHHHhcCCCCC---CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                  00000000000   001112345678899999999999999999999885

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.8e-26  Score=147.13  Aligned_cols=119  Identities=24%  Similarity=0.368  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHh-cCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFT-KKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+++.....     .....++..|+|||.+.+..++.++|||||||++||+++ |..|+...  ....+...+
T Consensus       141 ~~kl~dfg~s~~~~~~-----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i  213 (262)
T d1byga_         141 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRV  213 (262)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHH
T ss_pred             CEeecccccceecCCC-----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHH
Confidence            5799999999875432     223357889999999988889999999999999999998 67776431  111111111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...            ..     .+.+...+..+.+++.+||+.||++|||+.||+++|++++..
T Consensus       214 ~~~------------~~-----~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         214 EKG------------YK-----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             TTT------------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcC------------CC-----CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            110            00     011223345788999999999999999999999999998764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=6.1e-26  Score=152.45  Aligned_cols=117  Identities=20%  Similarity=0.188  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+....   ......||+.|+|||++.+..++.++||||+||++++|++|..||.....  .   ..  
T Consensus       164 ~vkL~DFG~a~~~~~~~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~---~~--  233 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--D---ET--  233 (350)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HH--
T ss_pred             eEEEeecchheeccccc---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH--H---HH--
Confidence            58999999999875432   23445789999999999988899999999999999999999999853211  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+........   ..........+.+++.+||+.||++|||++|++++
T Consensus       234 ------~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         234 ------LRNVKSCDWNMD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             ------HHHHHHTCCCSC---CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             ------HHHHHhCCCCCC---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  011110000000   00011223467889999999999999999999885

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.3e-26  Score=149.87  Aligned_cols=124  Identities=26%  Similarity=0.397  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+...... ........||+.|+|||.+....++.++|||||||++||+++|..|+........ ....+.
T Consensus       151 ~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~-~~~~i~  228 (285)
T d1fmka3         151 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVE  228 (285)
T ss_dssp             CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHH
T ss_pred             cEEEcccchhhhccCCC-ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Confidence            68999999998765432 2223345689999999999888899999999999999999997665432111110 111111


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ..            .     ..+.+.....++.+++.+||+.+|++|||+.+|++.|+.....
T Consensus       229 ~~------------~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         229 RG------------Y-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             TT------------C-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             hc------------C-----CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            00            0     0111223445688999999999999999999999998876644

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-25  Score=147.65  Aligned_cols=117  Identities=17%  Similarity=0.203  Sum_probs=82.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+......   ......|++.|+|||++.+..++.++||||+||++++|++|..||.....  .   ..  
T Consensus       155 ~vkl~DfG~a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~---~~--  224 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--Q---ET--  224 (293)
T ss_dssp             CEEECCCTTCEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HH--
T ss_pred             ceEecchhhhhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH--H---HH--
Confidence            48999999999875432   23345789999999999988899999999999999999999999853111  0   00  


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+........   ...+......+.+++.+||+.||++|||++|++++
T Consensus       225 ------~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         225 ------LANVSAVNYEFE---DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             ------HHHHHTTCCCCC---HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ------HHHHHhcCCCCC---chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  011111110000   00112234567889999999999999999999875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=6.8e-26  Score=149.94  Aligned_cols=112  Identities=20%  Similarity=0.227  Sum_probs=78.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC---CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN---GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      ++||+|||+|+....      .....||+.|+|||++.+   ..|+.++|||||||+++++++|..||.....    ...
T Consensus       153 ~~Kl~DFG~a~~~~~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~----~~~  222 (309)
T d1u5ra_         153 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSA  222 (309)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHH
T ss_pred             CEEEeecccccccCC------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH----HHH
Confidence            589999999987532      223579999999998754   3588999999999999999999999853111    000


Q ss_pred             hhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                               ...+........     .+......+.+++.+||+.||.+|||++|++++
T Consensus       223 ---------~~~i~~~~~~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         223 ---------LYHIAQNESPAL-----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             ---------HHHHHHSCCCCC-----SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ---------HHHHHhCCCCCC-----CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence                     011110000000     011223468889999999999999999999863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.9e-24  Score=142.61  Aligned_cols=131  Identities=11%  Similarity=0.031  Sum_probs=89.0

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+|+.+......     .......||+.|+|||.+.+..++.++|||||||+++++++|..||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         144 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred             eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH
Confidence            5899999999987543221     12234579999999999998889999999999999999999999986432211111


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREK  144 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~  144 (153)
                      ...          ............  ......+.++.+++..||+.+|++||+++++.+.|+.+..+
T Consensus       224 ~~~----------~~~~~~~~~~~~--~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         224 KYE----------RISEKKMSTPIE--VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -HH----------HHHHHHHHSCHH--HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHH----------HhhcccCCCChh--HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            000          000000000000  00112345688999999999999999999999999887654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=1.6e-25  Score=150.43  Aligned_cols=117  Identities=20%  Similarity=0.209  Sum_probs=82.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.+....   ......||+.|+|||++.+..++.++||||+||++++|++|..||.....  ...     
T Consensus       167 ~vkL~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~-----  236 (352)
T d1koba_         167 SVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LET-----  236 (352)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHH-----
T ss_pred             eEEEeecccceecCCCC---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHH-----
Confidence            58999999999875432   23345789999999999998999999999999999999999999853111  000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                            ...+........   ..........+.+|+.+||+.||++|||+.|++++
T Consensus       237 ------~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         237 ------LQNVKRCDWEFD---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             ------HHHHHHCCCCCC---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ------HHHHHhCCCCCC---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                  011111000000   00011234567899999999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.7e-25  Score=144.54  Aligned_cols=130  Identities=19%  Similarity=0.209  Sum_probs=83.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++.....   .......||+.|+|||++.+..|+.++||||+||++++|++|..||...... ..+.....
T Consensus       154 ~~kl~dfg~~~~~~~~---~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~  229 (305)
T d1blxa_         154 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILD  229 (305)
T ss_dssp             CEEECSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred             Ceeecchhhhhhhccc---ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence            5799999999865322   2334567999999999999889999999999999999999999998532211 11111111


Q ss_pred             hhc---cchhh-------hhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESL---PDRLT-------EVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...   .....       ............  .........+.+|+.+||+.||++|||+.|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         230 VIGLPGEEDWPRDVALPRQAFHSKSAQPIE--KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             HHCCCCGGGSCTTCSSCGGGSCCCCCCCGG--GTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhCCCchhcccccccchhhhhccccccchh--hccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000   00000       000000000000  0011223457789999999999999999999886

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-24  Score=144.49  Aligned_cols=114  Identities=18%  Similarity=0.168  Sum_probs=81.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+......  ......+||+.|+|||++.+..|+.++|+||+||++++|++|..||.....  ..+.    
T Consensus       143 ~vkl~DFG~a~~~~~~~--~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~----  214 (337)
T d1o6la_         143 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLF----  214 (337)
T ss_dssp             CEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             CEEEeecccccccccCC--cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHH----
Confidence            58999999998764322  233456899999999999999999999999999999999999999853211  0010    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                             .......+       ..+.....++.+++.+||+.||++|++     +.|++++
T Consensus       215 -------~~i~~~~~-------~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         215 -------ELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -------HHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -------HHHhcCCC-------CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence                   01111100       111223446788999999999999995     8888875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4e-25  Score=144.09  Aligned_cols=106  Identities=19%  Similarity=0.205  Sum_probs=77.9

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCc-cccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIV-SIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.....    ..+...||+.|+|||++.+..+ +.++||||+||+++++++|..||...       ..  
T Consensus       149 ~vkl~DFG~a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-------~~--  215 (273)
T d1xwsa_         149 ELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EE--  215 (273)
T ss_dssp             EEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HH--
T ss_pred             eEEECccccceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc-------hH--
Confidence            5799999999875432    2344579999999999876654 67799999999999999999998531       00  


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                                +...... .      +.....++.+++.+||+.||++|||++|++++
T Consensus       216 ----------i~~~~~~-~------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         216 ----------IIRGQVF-F------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             ----------HHHCCCC-C------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ----------HhhcccC-C------CCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                      0000000 0      01123467889999999999999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=8.6e-25  Score=147.54  Aligned_cols=115  Identities=16%  Similarity=0.176  Sum_probs=80.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.+....    .....||+.|+|||++.. ..|+.++||||+||++++|++|..||.......  .....
T Consensus       145 ~iKl~DFGla~~~~~~~----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~~  218 (364)
T d1omwa3         145 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEID  218 (364)
T ss_dssp             CEEECCCTTCEECSSSC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--HHHHH
T ss_pred             cEEEeeeceeeecCCCc----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence            58999999999775432    334579999999998864 468999999999999999999999985422111  11111


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                      ..        .....       ...+.....++.+++.+||+.||++|||     ++|++++
T Consensus       219 ~~--------~~~~~-------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         219 RM--------TLTMA-------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HH--------SSSCC-------CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             Hh--------cccCC-------CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            10        00000       0011123346788999999999999999     6888875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.1e-24  Score=140.95  Aligned_cols=126  Identities=21%  Similarity=0.322  Sum_probs=79.8

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ..+|+|||.++....... .......+||+.|+|||++.+..++.++||||+||++++|++|..||......     .. 
T Consensus       149 ~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~-  222 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-----SV-  222 (277)
T ss_dssp             CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HH-
T ss_pred             cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH-----HH-
Confidence            468999999987643221 22334567999999999998888999999999999999999999998532110     00 


Q ss_pred             hhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHH
Q 043099           81 SESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-CMTDAAAKLKKIRE  143 (153)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~evl~~l~~~~~  143 (153)
                             ....+.......   .......+..+.+++.+||+.||.+|| |++++++.|.+++.
T Consensus       223 -------~~~~~~~~~~~~---~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         223 -------AYQHVREDPIPP---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             -------HHHHHHCCCCCG---GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             -------HHHHHhcCCCCC---chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence                   000110000000   000122345688899999999999999 89999999988763

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-24  Score=142.62  Aligned_cols=133  Identities=17%  Similarity=0.177  Sum_probs=81.2

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+......  ......+||+.|+|||++... .++.++||||+||++++|++|..||...... ..+....
T Consensus       138 ~~KL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~l~~i~  214 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIF  214 (299)
T ss_dssp             CEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             ccccccCccccccCCCc--ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH-HHHHHHH
Confidence            57999999998765432  123345789999999987654 6899999999999999999999887532111 1111111


Q ss_pred             hh---hccchhhhhcc---ccchhhhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE---SLPDRLTEVVD---TNLVREEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~---~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ..   .....+.....   .......+..+   .......++.+++.+||+.||++|||++|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         215 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            10   00000000000   00000000000   001223568899999999999999999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.2e-24  Score=144.87  Aligned_cols=111  Identities=17%  Similarity=0.125  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+|+.+...     .....||+.|+|||++.+..++.++||||+||++++|++|..||....  .....    
T Consensus       179 ~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~--~~~~~----  247 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIY----  247 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHH----
T ss_pred             CEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC--HHHHH----
Confidence            5899999999987432     234579999999999999889999999999999999999999985311  00000    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                             ..+.....       ..+.....++.+++.+||+.||.+|+     |++|++++
T Consensus       248 -------~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         248 -------EKIVSGKV-------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -------HHHHHCCC-------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -------HHHhcCCC-------CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence                   11111100       01122345678899999999999994     89999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2.9e-24  Score=142.52  Aligned_cols=111  Identities=20%  Similarity=0.234  Sum_probs=80.8

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+|+.....     ....+||+.|+|||++.+..|+.++||||+||++++|++|..||.....  ...     
T Consensus       142 ~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~-----  209 (316)
T d1fota_         142 HIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKT-----  209 (316)
T ss_dssp             CEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHH-----
T ss_pred             CEEEecCccceEeccc-----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH--HHH-----
Confidence            5899999999986432     2345799999999999988899999999999999999999999853111  000     


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRI-----CMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~evl~~  137 (153)
                            ...+.....       ..+.....++.+++.+||+.||.+|+     |++|++++
T Consensus       210 ------~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         210 ------YEKILNAEL-------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             ------HHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             ------HHHHHcCCC-------CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence                  111111110       01112234678899999999999996     89999875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.7e-24  Score=140.26  Aligned_cols=117  Identities=18%  Similarity=0.292  Sum_probs=82.5

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      ++||+|||+++......   ......+++.|++||...+..++.++||||+||++++|++|..||......         
T Consensus       142 ~ikl~DFG~~~~~~~~~---~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~---------  209 (321)
T d1tkia_         142 TIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---------  209 (321)
T ss_dssp             CEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---------
T ss_pred             EEEEcccchhhccccCC---cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH---------
Confidence            58999999998864332   233457899999999998888999999999999999999999998532110         


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                          .....+.........   ........++.+++.+||..||++|||+.|++++
T Consensus       210 ----~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         210 ----QIIENIMNAEYTFDE---EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             ----HHHHHHHHTCCCCCH---HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ----HHHHHHHhCCCCCCh---hhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                001111111110000   0001234567899999999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-24  Score=143.22  Aligned_cols=113  Identities=23%  Similarity=0.227  Sum_probs=80.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+||++++|++|..||.....  ..+.    
T Consensus       141 ~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~----  212 (320)
T d1xjda_         141 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELF----  212 (320)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH----
T ss_pred             ceeccccchhhhccccc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--HHHH----
Confidence            57999999998764332  233445799999999999998999999999999999999999999853111  0010    


Q ss_pred             hhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 043099           82 ESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMT-DAAA  136 (153)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-evl~  136 (153)
                             ..+....     +.  .+......+.+++.+||+.||++|||+. ||++
T Consensus       213 -------~~i~~~~-----~~--~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         213 -------HSIRMDN-----PF--YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             -------HHHHHCC-----CC--CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -------HHHHcCC-----CC--CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                   0010000     00  1112345678999999999999999995 7865

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.87  E-value=1.2e-22  Score=133.46  Aligned_cols=132  Identities=11%  Similarity=0.047  Sum_probs=89.9

Q ss_pred             ceEecccccceeccCCCCC-----cccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccch
Q 043099            2 VAHVSDFGISKLLGEGDGS-----MTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNL   76 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~-----~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~   76 (153)
                      .+||+|||+|+.+......     ......+||+.|+|||.+.+..++.++||||+|++++++++|..||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            4799999999987543221     12234579999999999999889999999999999999999999985322211110


Q ss_pred             HHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 043099           77 RNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAKLKKIREKF  145 (153)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~l~~~~~~~  145 (153)
                       ..         ..+...........  .....+.++.+++..|+..+|++||+.+.+.+.|+++.++.
T Consensus       224 -~~---------~~i~~~~~~~~~~~--l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         224 -KY---------ERIGEKKQSTPLRE--LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             -HH---------HHHHHHHHHSCHHH--HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             -HH---------HHHHhccCCCChHH--hcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence             00         00000000000000  00123356888999999999999999999999998887664

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.87  E-value=1.1e-23  Score=137.37  Aligned_cols=117  Identities=21%  Similarity=0.214  Sum_probs=80.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccC------CCCccccccchhhhHHHHHHHhcCCCCCccCCCccc
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGS------NGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTN   75 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~------~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~   75 (153)
                      ++||+|||+++.+....   ......||+.|.+||.+.      ...++.++||||+||++++|++|..||.....  ..
T Consensus       148 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~--~~  222 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--ML  222 (277)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH
T ss_pred             CeEEccchheeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH--HH
Confidence            57999999999875432   234457999999999764      23478899999999999999999999853211  00


Q ss_pred             hHHhhhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           76 LRNWVSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .           ...+........   .+.......++.+++.+||+.+|++|||+.||+++
T Consensus       223 ~-----------~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         223 M-----------LRMIMSGNYQFG---SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             H-----------HHHHHHTCCCCC---TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             H-----------HHHHHhCCCCCC---CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            0           011111110000   00112234568899999999999999999999875

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.2e-22  Score=134.96  Aligned_cols=135  Identities=19%  Similarity=0.180  Sum_probs=80.7

Q ss_pred             ceEecccccceeccCCCC--CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHH
Q 043099            2 VAHVSDFGISKLLGEGDG--SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRN   78 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~--~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~   78 (153)
                      .+||+|||+++.+.....  .......+||+.|+|||.+.+. .++.++||||+||+++++++|+.||........ ...
T Consensus       155 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~  233 (318)
T d3blha1         155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LAL  233 (318)
T ss_dssp             CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH
T ss_pred             cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHH-HHH
Confidence            589999999987653221  1122335799999999988765 689999999999999999999999853221110 000


Q ss_pred             hhh--hhc-cchhhhhc----cccch---hhhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           79 WVS--ESL-PDRLTEVV----DTNLV---REEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        79 ~~~--~~~-~~~~~~~~----~~~~~---~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...  ... +.......    .....   .......   ........+.+|+.+||+.||++|||++|++++
T Consensus       234 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         234 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             HHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            000  000 00000000    00000   0000000   001123456789999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.1e-23  Score=136.07  Aligned_cols=133  Identities=22%  Similarity=0.192  Sum_probs=82.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||+|+......  .......||+.|+|||.+.... ++.++||||+||++++|++|..||....... .+....
T Consensus       140 ~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~  216 (298)
T d1gz8a_         140 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIF  216 (298)
T ss_dssp             CEEECSTTHHHHHCCCS--BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred             cceeccCCcceeccCCc--ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHH
Confidence            57999999998765432  2344457999999999876654 5789999999999999999999985322111 111111


Q ss_pred             hh-hcc--chhhhhcc-ccchhh-----hhcch-hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE-SLP--DRLTEVVD-TNLVRE-----EQNFS-AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~-~~~--~~~~~~~~-~~~~~~-----~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. ..+  ........ ......     ..... ........+.+++.+||+.||++|||+.|++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            10 000  00000000 000000     00000 001223567889999999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.8e-23  Score=138.06  Aligned_cols=137  Identities=18%  Similarity=0.179  Sum_probs=84.6

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCC-CCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSN-GIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~-~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+++.+....   ......|++.|+|||.+.+ ..++.++||||+||+++|+++|..||...... ..+....
T Consensus       161 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~  236 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEII  236 (350)
T ss_dssp             CEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHH
T ss_pred             ceeEecccchhhccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHH
Confidence            57999999999875432   2233578999999998765 46899999999999999999999998542211 1111111


Q ss_pred             hh---hccchhhhhc----c---ccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 043099           81 SE---SLPDRLTEVV----D---TNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIR  142 (153)
Q Consensus        81 ~~---~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~  142 (153)
                      ..   .....+....    .   ...................+.+|+.+||..||++|||+.|++++  ++++.
T Consensus       237 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             HHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             HHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            10   0000000000    0   00000000000011234467889999999999999999999986  55543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.3e-22  Score=134.13  Aligned_cols=136  Identities=17%  Similarity=0.085  Sum_probs=81.7

Q ss_pred             ceEecccccceeccCCCC-CcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDG-SMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+|+....... .......+|++.|+|||++... .++.++||||+||++++|++|..||.............
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~  226 (345)
T d1pmea_         147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  226 (345)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh
Confidence            579999999987643221 1223456799999999988544 67889999999999999999999985432111000000


Q ss_pred             hhhhccchhhhhcc--ccchh------hhhcch---hhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           80 VSESLPDRLTEVVD--TNLVR------EEQNFS---AKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~--~~~~~------~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....+........  .....      .....+   ........+.+++.+||+.||++|||++|++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         227 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00000000000000  00000      000000   001122467899999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=1.1e-22  Score=133.35  Aligned_cols=133  Identities=19%  Similarity=0.149  Sum_probs=78.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||.|.......  .......|++.|++||.+.+. .++.++||||+||+++++++|+.||....... .+....
T Consensus       138 ~~kl~DfG~a~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~  214 (286)
T d1ob3a_         138 ELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIF  214 (286)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred             CEEecccccceecccCc--cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHH
Confidence            57999999998765332  223344688999999988654 57899999999999999999999985422111 111111


Q ss_pred             hh-hc--cchhhhhcc-----ccc--hhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SE-SL--PDRLTEVVD-----TNL--VREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~-~~--~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .. +.  .........     ...  ....+...........+.+++.+||+.||++|||++|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00 00  000000000     000  00000000011223567899999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=3.1e-22  Score=133.44  Aligned_cols=133  Identities=12%  Similarity=0.144  Sum_probs=82.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+......   .....++|+.|+|||.+.+. .++.++||||+||+++++++|..||..............
T Consensus       168 ~vkl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~  244 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  244 (328)
T ss_dssp             EEEECCGGGCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             eeeecccccceeccCCC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHH
Confidence            47999999999875433   23445789999999987765 578999999999999999999999854322111111100


Q ss_pred             h------------hhccc---hhhhhccccch---hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 S------------ESLPD---RLTEVVDTNLV---REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~------------~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .            .....   ...........   ..............++.+|+.+||..||++|||++|++++
T Consensus       245 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             HHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0            00000   00000000000   0000001112233567899999999999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.6e-22  Score=134.45  Aligned_cols=119  Identities=20%  Similarity=0.205  Sum_probs=80.0

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC--CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG--IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNW   79 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~--~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~   79 (153)
                      .+||+|||+++.+.... ........|++.|++||.+.+.  .++.++||||+||++++|++|..||........ ....
T Consensus       167 ~vkL~DFG~a~~~~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i  244 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEI  244 (322)
T ss_dssp             CEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHH
T ss_pred             CEEEeeccchhhhcccc-cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence            58999999998764332 2233445789999999988654  467899999999999999999999864322211 1111


Q ss_pred             hhhhccchhhhhccccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 043099           80 VSESLPDRLTEVVDTNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRIC-----MTDAAAK  137 (153)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~evl~~  137 (153)
                      ....        ...       ..+.+.....++.+++.+||++||.+|||     ++|++++
T Consensus       245 ~~~~--------~~~-------~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         245 SRRI--------LKS-------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             HHHH--------HHC-------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHhc--------ccC-------CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            1100        000       01111234467888999999999999994     8899874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.1e-21  Score=131.52  Aligned_cols=134  Identities=19%  Similarity=0.184  Sum_probs=82.7

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+||+|||+|+.....     .+...||+.|+|||.+.+. .++.++||||+||+++++++|..||...... ..+....
T Consensus       159 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~  232 (346)
T d1cm8a_         159 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIM  232 (346)
T ss_dssp             CEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred             ccccccccceeccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHH
Confidence            5799999999876432     3345789999999987654 5789999999999999999999998542111 0111111


Q ss_pred             hhhc--cchhhhhc--------c---ccchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 043099           81 SESL--PDRLTEVV--------D---TNLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK--LKKIR  142 (153)
Q Consensus        81 ~~~~--~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~--l~~~~  142 (153)
                      ....  +.......        .   ........ ..........+.+|+.+||..||++|||+.|++++  ++.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         233 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hccCCCcHHHHhhhcchhhhhhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            0000  00000000        0   00000000 00001223467789999999999999999999986  55443

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.4e-21  Score=130.38  Aligned_cols=132  Identities=17%  Similarity=0.094  Sum_probs=76.3

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWVS   81 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~   81 (153)
                      .+|++|||+++......   ......+|+.|+|||++.+..++.++||||+||+++++++|..||...... ........
T Consensus       157 ~~kl~df~~~~~~~~~~---~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~  232 (355)
T d2b1pa1         157 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIE  232 (355)
T ss_dssp             CEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred             ceeeechhhhhcccccc---ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHH
Confidence            46899999988765332   334557899999999999889999999999999999999999998532110 00000000


Q ss_pred             hhc----------cchhhhhcccc----------ch---hhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           82 ESL----------PDRLTEVVDTN----------LV---REEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        82 ~~~----------~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ...          ...........          ..   ...............+.+|+.+||..||++|||++||+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000          00000000000          00   0000111223456678999999999999999999999977

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=3.3e-21  Score=129.87  Aligned_cols=130  Identities=17%  Similarity=0.122  Sum_probs=82.2

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhhHHHHHHHhcCCCCCccCCCc-cchHHh--
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGK-TNLRNW--   79 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~--   79 (153)
                      +|++|||.+......     ....+||+.|+|||.+.+..++.++||||+||+++++++|+.||....... ......  
T Consensus       171 ~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         171 IKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeEeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            789999999875422     234578999999999888889999999999999999999999986432211 000000  


Q ss_pred             --hh--hhccchh-------hhhcc-------------ccchh-hhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 043099           80 --VS--ESLPDRL-------TEVVD-------------TNLVR-EEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDA  134 (153)
Q Consensus        80 --~~--~~~~~~~-------~~~~~-------------~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ev  134 (153)
                        +.  ...+...       .....             ..... ..............+.+|+.+||..||.+|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence              00  0000000       00000             00000 001112234567789999999999999999999999


Q ss_pred             HHH
Q 043099          135 AAK  137 (153)
Q Consensus       135 l~~  137 (153)
                      +++
T Consensus       326 L~H  328 (362)
T d1q8ya_         326 VNH  328 (362)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.4e-21  Score=128.27  Aligned_cols=134  Identities=16%  Similarity=0.120  Sum_probs=81.4

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCCC-ccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGI-VSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~-~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      ++||+|||.|+.......  ......+++.|.|||.+.+.. ++.++||||+||++++|++|..|+..............
T Consensus       139 ~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~  216 (292)
T d1unla_         139 ELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             ceeeeecchhhcccCCCc--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence            579999999998754322  233345778899999887654 78999999999999999999998743222111111111


Q ss_pred             hhhcc---chh---hhhccc----cchhhhhcchhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESLP---DRL---TEVVDT----NLVREEQNFSAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~~---~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      .....   ...   ......    ..................+.+|+.+||+.||++|||++||+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11000   000   000000    0000000001112233467889999999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=9.8e-20  Score=122.11  Aligned_cols=130  Identities=20%  Similarity=0.184  Sum_probs=75.1

Q ss_pred             ceEecccccceeccCCCCCcccccccccccccCcCccCCC-CccccccchhhhHHHHHHHhcCCCCCccCCCccchHHhh
Q 043099            2 VAHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNG-IVSIKCDVYSYGVLLMEAFTKKKPTNEMFTGKTNLRNWV   80 (153)
Q Consensus         2 ~~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~-~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~   80 (153)
                      .+|++|||++.....     ......|++.|+|||...+. .++.++||||+||+++++++|..||....... ......
T Consensus       159 ~~kl~dfg~a~~~~~-----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~-~~~~i~  232 (348)
T d2gfsa1         159 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLIL  232 (348)
T ss_dssp             CEEECCC----CCTG-----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred             cccccccchhcccCc-----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence            579999999976532     23345789999999986665 56889999999999999999999985321100 000000


Q ss_pred             hhhc--cchhhhhccc--------cchh-hhhcc-hhhHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 043099           81 SESL--PDRLTEVVDT--------NLVR-EEQNF-SAKLDCLLSIMYLALDCCMESPEQRICMTDAAAK  137 (153)
Q Consensus        81 ~~~~--~~~~~~~~~~--------~~~~-~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~evl~~  137 (153)
                      ....  ..........        .... ..... .........+.+|+.+||..||++|||++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         233 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             HHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence            0000  0000000000        0000 00000 0001123567889999999999999999999985

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.65  E-value=0.027  Score=33.13  Aligned_cols=46  Identities=20%  Similarity=0.091  Sum_probs=23.3

Q ss_pred             eEecccccceeccCCCCCcccccccccccccCcCccCCCCccccccchhhh
Q 043099            3 AHVSDFGISKLLGEGDGSMTQTMTMATIGYMAPEYGSNGIVSIKCDVYSYG   53 (153)
Q Consensus         3 ~kl~DfG~a~~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~dv~s~g   53 (153)
                      ++|+|||.|+....+....-....+...    .+. ....|...+|+||..
T Consensus       141 ~~liDFG~a~~~~~~~~~~~l~rd~~~~----~~~-f~r~y~~~~d~~s~~  186 (191)
T d1zara2         141 IWIIDFPQSVEVGEEGWREILERDVRNI----ITY-FSRTYRTEKDINSAI  186 (191)
T ss_dssp             EEECCCTTCEETTSTTHHHHHHHHHHHH----HHH-HHHHHCCCCCHHHHH
T ss_pred             EEEEECCCcccCCCCCcHHHHHHHHHHH----HHH-HcCCCCCcccHHHHH
Confidence            6899999998754222100000000000    001 124678889999964

>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Forkhead DNA-binding domain
domain: HFH-1 (HNF-3 forkhead homolog-1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.15  E-value=0.99  Score=22.10  Aligned_cols=33  Identities=15%  Similarity=0.080  Sum_probs=24.6

Q ss_pred             HHhhccccCCCCCCCHHHHHHHHHHHHHHhhhc
Q 043099          116 LALDCCMESPEQRICMTDAAAKLKKIREKFLDD  148 (153)
Q Consensus       116 l~~~cl~~~p~~Rps~~evl~~l~~~~~~~~~~  148 (153)
                      |+..++...|++|.|..|+.+.+++-..-+..+
T Consensus         4 LI~~Ai~~sp~~~ltL~eIy~~i~~~fpy~r~~   36 (75)
T d1kq8a_           4 LITMAIRDSAGGRLTLAEINEYLMGKFPFFRGS   36 (75)
T ss_dssp             HHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGT
T ss_pred             HHHHHHHhCCCCCccHHHHHHHHHHhCcccccC
Confidence            455566778999999999999998765554433