BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043102
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q49807|CMAS2_MYCLE Cyclopropane mycolic acid synthase 2 OS=Mycobacterium leprae
(strain TN) GN=cmaA2 PE=3 SV=1
Length = 308
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 83/218 (38%), Gaps = 75/218 (34%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVKR----------------- 412
+ HYD SNE F L+LD S+TYSCA F+ R + L + KR
Sbjct: 23 VQSHYDRSNEFFKLWLDPSMTYSCAYFE-RPDLTLEEAQRAKRDLALSKLGLEPGMTLLD 81
Query: 413 TGC-----------KY----TGITLAEKQLKYAGIKVKEADLERNDRS------------ 445
GC KY G+TL+ QL + +K E D R DR+
Sbjct: 82 IGCGWGSTMLHAIEKYDVNVIGLTLSANQLAHNKLKFAEIDHTRTDRTKDVRLQGWEQFD 141
Query: 446 ---------------------FGHEYMEEFFGCCESLIAKDGLFVLQFISIPDER-YNEF 483
G E + FF C ++ DG +L I +PD + E
Sbjct: 142 EPVDRIISLGAFEHFADGAGDAGFERYDSFFKMCYDVLPDDGRMLLHTIIVPDAKETKEL 201
Query: 484 RLSS--------DFMKEYIFPGGCLPSLSRITSAMSAA 513
L++ F+ IFPGG LP +S++ S A
Sbjct: 202 GLTTPMSLLRFIKFILTEIFPGGRLPKISQVDHYSSNA 239
>sp|P0C5C2|CMAS1_MYCTU Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis
GN=cmaA1 PE=1 SV=1
Length = 287
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 65/208 (31%)
Query: 369 HISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK----------------- 411
++ HYDLS++ F LFLD + TYSCA F+ R+ + L ++ K
Sbjct: 11 NVQAHYDLSDDFFRLFLDPTQTYSCAYFE-RDDMTLQEAQIAKIDLALGKLGLQPGMTLL 69
Query: 412 RTGC-----------KY----TGITLAEKQLKYAGIKVKEADLERNDR------------ 444
GC KY G+TL++ Q + V ++ R+ R
Sbjct: 70 DVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEP 129
Query: 445 -----------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS--IPDERYNE-------FR 484
FGHE + FF L+ DG+ +L I+ P E + F
Sbjct: 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFA 189
Query: 485 LSSDFMKEYIFPGGCLPSLSRITSAMSA 512
F+ IFPGG LPS+ + SA
Sbjct: 190 RFLKFIVTEIFPGGRLPSIPMVQECASA 217
>sp|A5U866|CMAS1_MYCTA Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=cmaA1 PE=1 SV=1
Length = 287
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 65/208 (31%)
Query: 369 HISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK----------------- 411
++ HYDLS++ F LFLD + TYSCA F+ R+ + L ++ K
Sbjct: 11 NVQAHYDLSDDFFRLFLDPTQTYSCAYFE-RDDMTLQEAQIAKIDLALGKLGLQPGMTLL 69
Query: 412 RTGC-----------KY----TGITLAEKQLKYAGIKVKEADLERNDR------------ 444
GC KY G+TL++ Q + V ++ R+ R
Sbjct: 70 DVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEP 129
Query: 445 -----------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS--IPDERYNE-------FR 484
FGHE + FF L+ DG+ +L I+ P E + F
Sbjct: 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFA 189
Query: 485 LSSDFMKEYIFPGGCLPSLSRITSAMSA 512
F+ IFPGG LPS+ + SA
Sbjct: 190 RFLKFIVTEIFPGGRLPSIPMVQECASA 217
>sp|P0A5P0|CMAS2_MYCTU Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis
GN=cmaA2 PE=1 SV=1
Length = 302
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 81/215 (37%), Gaps = 72/215 (33%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVKR----------------- 412
+ HYD SNE F L+LD S+TYSCA F+ R + L + KR
Sbjct: 20 VRSHYDKSNEFFKLWLDPSMTYSCAYFE-RPDMTLEEAQYAKRKLALDKLNLEPGMTLLD 78
Query: 413 TGCKY---------------TGITLAEKQLKYAGIKVKEADLERN--------------- 442
GC + G+TL+E Q + E D R
Sbjct: 79 IGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138
Query: 443 DR-----SFGH----------EYMEEFFGCCESLIAKDGLFVLQFISIPD-ERYNEFRLS 486
DR +F H E + FF +L DG +L I+IPD E E L+
Sbjct: 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLT 198
Query: 487 S--------DFMKEYIFPGGCLPSLSRITSAMSAA 513
S F+ IFPGG LP +S++ S A
Sbjct: 199 SPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNA 233
>sp|P0A5P1|CMAS2_MYCBO Cyclopropane mycolic acid synthase 2 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cmaA2 PE=3 SV=1
Length = 302
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 81/215 (37%), Gaps = 72/215 (33%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVKR----------------- 412
+ HYD SNE F L+LD S+TYSCA F+ R + L + KR
Sbjct: 20 VRSHYDKSNEFFKLWLDPSMTYSCAYFE-RPDMTLEEAQYAKRKLALDKLNLEPGMTLLD 78
Query: 413 TGCKY---------------TGITLAEKQLKYAGIKVKEADLERN--------------- 442
GC + G+TL+E Q + E D R
Sbjct: 79 IGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138
Query: 443 DR-----SFGH----------EYMEEFFGCCESLIAKDGLFVLQFISIPD-ERYNEFRLS 486
DR +F H E + FF +L DG +L I+IPD E E L+
Sbjct: 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLT 198
Query: 487 S--------DFMKEYIFPGGCLPSLSRITSAMSAA 513
S F+ IFPGG LP +S++ S A
Sbjct: 199 SPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNA 233
>sp|Q79FX6|MMAA2_MYCTU Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium
tuberculosis GN=mmaA2 PE=1 SV=1
Length = 287
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 65/211 (30%)
Query: 360 TNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK-------- 411
N LT + HYDLS++ F LFLD + TYSCA F+ RE + L ++ K
Sbjct: 2 VNDLTPHFEDVQAHYDLSDDFFRLFLDPTQTYSCAHFE-REDMTLEEAQIAKIDLALGKL 60
Query: 412 ---------RTGCKY---------------TGITLAEKQLKYAGIKVKEADLERNDR--- 444
GC + G+TL++ Q + E D R+ R
Sbjct: 61 GLQPGMTLLDIGCGWGATMRRAIAQYDVNVVGLTLSKNQAAHVQKSFDEMDTPRDRRVLL 120
Query: 445 --------------------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-IPDERYNEF 483
FGH+ +FF ++ DG+ +L I+ + ++ +
Sbjct: 121 AGWEQFNEPVDRIVSIGAFEHFGHDRHADFFARAHKILPPDGVLLLHTITGLTRQQMVDH 180
Query: 484 RLS--------SDFMKEYIFPGGCLPSLSRI 506
L F+ IFPGG P++ +
Sbjct: 181 GLPLTLWLARFLKFIATEIFPGGQPPTIEMV 211
>sp|A5U029|MMAA2_MYCTA Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA2 PE=1
SV=1
Length = 287
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 65/211 (30%)
Query: 360 TNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK-------- 411
N LT + HYDLS++ F LFLD + TYSCA F+ RE + L ++ K
Sbjct: 2 VNDLTPHFEDVQAHYDLSDDFFRLFLDPTQTYSCAHFE-REDMTLEEAQIAKIDLALGKL 60
Query: 412 ---------RTGCKY---------------TGITLAEKQLKYAGIKVKEADLERNDR--- 444
GC + G+TL++ Q + E D R+ R
Sbjct: 61 GLQPGMTLLDIGCGWGATMRRAIAQYDVNVVGLTLSKNQAAHVQKSFDEMDTPRDRRVLL 120
Query: 445 --------------------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-IPDERYNEF 483
FGH+ +FF ++ DG+ +L I+ + ++ +
Sbjct: 121 AGWEQFNEPVDRIVSIGAFEHFGHDRHADFFARAHKILPPDGVLLLHTITGLTRQQMVDH 180
Query: 484 RLS--------SDFMKEYIFPGGCLPSLSRI 506
L F+ IFPGG P++ +
Sbjct: 181 GLPLTLWLARFLKFIATEIFPGGQPPTIEMV 211
>sp|Q7D9R5|CMAS3_MYCTU Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis
GN=pcaA PE=1 SV=1
Length = 287
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 77/208 (37%), Gaps = 65/208 (31%)
Query: 363 LTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK----------- 411
LT ++ HYDLS++ F LFLD + TYSCA F+ R+ + L ++ K
Sbjct: 5 LTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFE-RDDMTLQEAQIAKIDLALGKLNLE 63
Query: 412 ------RTGC-----------KY----TGITLAEKQLKYAGIKVKEADLERNDR------ 444
GC KY G+TL+E Q + + D R+ R
Sbjct: 64 PGMTLLDIGCGWGATMRRAIEKYDVNVVGLTLSENQAGHVQKMFDQMDTPRSRRVLLEGW 123
Query: 445 -----------------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDER-------- 479
FGH+ FF + DG +L I P +
Sbjct: 124 EKFDEPVDRIVSIGAFEHFGHQRYHHFFEVTHRTLPADGKMLLHTIVRPTFKEGREKGLT 183
Query: 480 -YNEFRLSSDFMKEYIFPGGCLPSLSRI 506
+E + F+ IFPGG LPS+ +
Sbjct: 184 LTHELVHFTKFILAEIFPGGWLPSIPTV 211
>sp|Q7U1J9|MMAA2_MYCBO Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=cmaC PE=1 SV=1
Length = 287
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 65/211 (30%)
Query: 360 TNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIFLGTIEVVK-------- 411
N LT + HYDLS++ F LFLD + TYSCA F+ RE + L ++ K
Sbjct: 2 VNDLTPHFEDVQAHYDLSDDFFRLFLDPTQTYSCAHFE-REDMTLEEAQIAKIDLALGKL 60
Query: 412 ---------RTGCKY---------------TGITLAEKQLKYAGIKVKEAD--LERN--- 442
GC + G+TL++ Q + E D L+R
Sbjct: 61 GLQPGMTLLDIGCGWGATMRRAIAQYDVNVVGLTLSKNQAAHVQKSFDEMDTPLDRRVLL 120
Query: 443 ----------DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-IPDERYNEF 483
DR FGH+ +FF ++ DG+ +L I+ + ++ +
Sbjct: 121 AGWEQFNEPVDRIVSIGAFEHFGHDRHADFFARAHKILPPDGVLLLHTITGLTRQQMVDH 180
Query: 484 RLS--------SDFMKEYIFPGGCLPSLSRI 506
L F+ IFPGG P++ +
Sbjct: 181 GLPLTLWLARFLKFIATEIFPGGQPPTIEMV 211
>sp|P0A9H7|CFA_ECOLI Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli
(strain K12) GN=cfa PE=1 SV=2
Length = 382
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 53/186 (28%)
Query: 373 HYDLSNELFCLFLDESLTYSCALFK---------------VREVIFLGTIEVVKRTGCKY 417
HYDL N+LF LD + YSCA +K + E + L V GC +
Sbjct: 119 HYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGW 178
Query: 418 ---------------TGITLAEKQLKYAGIKVKEADL--------ERNDR---------- 444
G+T++ +Q K A + + D+ + ND+
Sbjct: 179 GGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMF 238
Query: 445 -SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSL 503
G + + +F + + +G+F+L I N ++ +YIFP GCLPS+
Sbjct: 239 EHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN----VDPWINKYIFPNGCLPSV 294
Query: 504 SRITSA 509
+I +
Sbjct: 295 RQIAQS 300
>sp|P0A9H8|CFA_ECOL6 Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cfa PE=3
SV=2
Length = 382
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 53/186 (28%)
Query: 373 HYDLSNELFCLFLDESLTYSCALFK---------------VREVIFLGTIEVVKRTGCKY 417
HYDL N+LF LD + YSCA +K + E + L V GC +
Sbjct: 119 HYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGW 178
Query: 418 ---------------TGITLAEKQLKYAGIKVKEADL--------ERNDR---------- 444
G+T++ +Q K A + + D+ + ND+
Sbjct: 179 GGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMF 238
Query: 445 -SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSL 503
G + + +F + + +G+F+L I N ++ +YIFP GCLPS+
Sbjct: 239 EHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN----VDPWINKYIFPNGCLPSV 294
Query: 504 SRITSA 509
+I +
Sbjct: 295 RQIAQS 300
>sp|P31049|FAMT_PSEPU Probable fatty acid methyltransferase OS=Pseudomonas putida PE=3
SV=1
Length = 394
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 78/206 (37%), Gaps = 67/206 (32%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIF----------------LGTIEVVKRT 413
IS HYD+SN + L+LD+ + YSCA F+ + L + +
Sbjct: 107 ISYHYDVSNAFYQLWLDQDMAYSCAYFREPDNTLDQAQQDKFDHLCRKLRLNAGDYLLDV 166
Query: 414 GC---------------KYTGITLAEKQLKYAGIKVKEA--------------DLERNDR 444
GC K GITL+++QLK +VK DL ++ R
Sbjct: 167 GCGWGGLARFAAREYDAKVFGITLSKEQLKLGRQRVKAEGLTDKVDLQILDYRDLPQDGR 226
Query: 445 -----------SFGHE----YMEEFFGCCES--LIAKDGLFVLQFISIPDERYNEFRLSS 487
GH Y ++ FG L+ G+ P R +
Sbjct: 227 FDKVVSVGMFEHVGHANLALYCQKLFGAVREGGLVMNHGITAKHVDGRPVGRG-----AG 281
Query: 488 DFMKEYIFPGGCLPSLSRITSAMSAA 513
+F+ Y+FP G LP LS I++++ A
Sbjct: 282 EFIDRYVFPHGELPHLSMISASICEA 307
>sp|P0CH91|MMAA3_MYCTU Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis
GN=mmaA3 PE=1 SV=1
Length = 293
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 67/209 (32%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LGTI----------- 407
+ HYDLS+ F LF D + TYSCA F+ ++ LG +
Sbjct: 18 VQAHYDLSDAFFALFQDPTRTYSCAYFERDDMTLHEAQVAKLDLTLGKLGLEPGMTLLDV 77
Query: 408 -----EVVKRTGCKY----TGITLAEKQLKYAGIKVKEADLERNDR-------------- 444
V+KR +Y G+TL++ Q Y + + D R+ R
Sbjct: 78 GCGWGSVMKRAVERYDVNVVGLTLSKNQHAYCQQVLDKVDTNRSHRVLLSDWANFSEPVD 137
Query: 445 ---------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-----------IPDERYNEFR 484
FG E ++FF + + DG+ +L I+ IP E
Sbjct: 138 RIVTIEAIEHFGFERYDDFFKFAYNAMPADGVMLLHSITGLHVKQVIERGIP--LTMEMA 195
Query: 485 LSSDFMKEYIFPGGCLPSLSRITSAMSAA 513
F+ IFPGG LP++ I ++ A
Sbjct: 196 KFIRFIVTDIFPGGRLPTIETIEEHVTKA 224
>sp|A5U028|MMAA3_MYCTA Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=mmaA3 PE=1 SV=1
Length = 293
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 67/209 (32%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LGTI----------- 407
+ HYDLS+ F LF D + TYSCA F+ ++ LG +
Sbjct: 18 VQAHYDLSDAFFALFQDPTRTYSCAYFERDDMTLHEAQVAKLDLTLGKLGLEPGMTLLDV 77
Query: 408 -----EVVKRTGCKY----TGITLAEKQLKYAGIKVKEADLERNDR-------------- 444
V+KR +Y G+TL++ Q Y + + D R+ R
Sbjct: 78 GCGWGSVMKRAVERYDVNVVGLTLSKNQHAYCQQVLDKVDTNRSHRVLLSDWANFSEPVD 137
Query: 445 ---------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-----------IPDERYNEFR 484
FG E ++FF + + DG+ +L I+ IP E
Sbjct: 138 RIVTIEAIEHFGFERYDDFFKFAYNAMPADGVMLLHSITGLHVKQVIERGIP--LTMEMA 195
Query: 485 LSSDFMKEYIFPGGCLPSLSRITSAMSAA 513
F+ IFPGG LP++ I ++ A
Sbjct: 196 KFIRFIVTDIFPGGRLPTIETIEEHVTKA 224
>sp|Q7U1K0|MMAA3_MYCBO Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cmaB PE=1 SV=1
Length = 293
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 67/209 (32%)
Query: 370 ISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LGTI----------- 407
+ HYDLS+ F LF D + TYSCA F+ ++ LG +
Sbjct: 18 VQAHYDLSDAFFALFQDPTRTYSCAYFERDDMTLHEAQVAKLDLTLGKLGLEPGMTLLDV 77
Query: 408 -----EVVKRTGCKY----TGITLAEKQLKYAGIKVKEADLERNDR-------------- 444
V+KR +Y G+TL++ Q Y + + D R+ R
Sbjct: 78 GCGWGSVMKRAVERYDVNVVGLTLSKNQHAYCQQVLDKVDTNRSHRVLLSDWANFSEPVD 137
Query: 445 ---------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS-----------IPDERYNEFR 484
FG E ++FF + + DG+ +L I+ IP E
Sbjct: 138 RIVTIEAIEHFGFERYDDFFKFAYNAMPADGVMLLHSITGLHVKQVIERGIP--LTMEMA 195
Query: 485 LSSDFMKEYIFPGGCLPSLSRITSAMSAA 513
F+ IFPGG LP++ I ++ A
Sbjct: 196 KFIRFIVTDIFPGGRLPTIETIEEHVTKA 224
>sp|Q7U1K1|MMAA4_MYCBO Hydroxymycolate synthase MmaA4 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=cmaA PE=1 SV=1
Length = 301
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 357 ISRTNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LG 405
IS T T T+ I HYD+S++ F LF D + TYSCA F+ E+ L
Sbjct: 9 ISPTKTRTR-FEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLD 67
Query: 406 TIEV--------------------VKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--- 442
+++ V+R G+TL++ Q + D R+
Sbjct: 68 KLDLKPGMTLLDIGCGWGTTMRRAVERLDVNVIGLTLSKNQHARCEQVLASIDTNRSRQV 127
Query: 443 ------------DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNE 482
DR FGHE ++FF C +++ DG +Q Y+
Sbjct: 128 LLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ----SSVSYHP 183
Query: 483 FRLSS-------------DFMKEYIFPGGCLPS 502
+ +++ F+ IFPGG LPS
Sbjct: 184 YEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 216
>sp|Q79FX8|MMAA4_MYCTU Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis
GN=mmaA4 PE=1 SV=1
Length = 301
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 357 ISRTNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LG 405
IS T T T+ I HYD+S++ F LF D + TYSCA F+ E+ L
Sbjct: 9 ISPTKTRTR-FEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLD 67
Query: 406 TIEV--------------------VKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--- 442
+++ V+R G+TL++ Q + D R+
Sbjct: 68 KLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQV 127
Query: 443 ------------DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNE 482
DR FGHE ++FF C +++ DG +Q Y+
Sbjct: 128 LLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ----SSVSYHP 183
Query: 483 FRLSS-------------DFMKEYIFPGGCLPS 502
+ +++ F+ IFPGG LPS
Sbjct: 184 YEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 216
>sp|A5U027|MMAA4_MYCTA Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=mmaA4 PE=1 SV=1
Length = 301
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 357 ISRTNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVREVIF-----------LG 405
IS T T T+ I HYD+S++ F LF D + TYSCA F+ E+ L
Sbjct: 9 ISPTKTRTR-FEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLD 67
Query: 406 TIEV--------------------VKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--- 442
+++ V+R G+TL++ Q + D R+
Sbjct: 68 KLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQV 127
Query: 443 ------------DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNE 482
DR FGHE ++FF C +++ DG +Q Y+
Sbjct: 128 LLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ----SSVSYHP 183
Query: 483 FRLSS-------------DFMKEYIFPGGCLPS 502
+ +++ F+ IFPGG LPS
Sbjct: 184 YEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 216
>sp|P0C5C3|MMAA1_MYCTU Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis
GN=mmaA1 PE=1 SV=1
Length = 286
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 72/204 (35%), Gaps = 65/204 (31%)
Query: 374 YDLSNELFCLFLDESLTYSCALFKVREVIFL----------------------------- 404
YD+S++ F LFLD + Y+CA F+ ++
Sbjct: 15 YDISDDFFALFLDPTWVYTCAYFERDDMTLEEAQLAKVDLALDKLNLEPGMTLLDVGCGW 74
Query: 405 --GTIEVVKRTGCKYTGITLAEKQL-----KYAGIKVK---EADL-------ERNDR--- 444
+ V++ G+TL+ + A I + EA L E DR
Sbjct: 75 GGALVRAVEKYDVNVIGLTLSRNHYERSKDRLAAIGTQRRAEARLQGWEEFEENVDRIVS 134
Query: 445 -----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERY----------NEFRLSSDF 489
+F E FF ++ DG +L + D R+ ++ R F
Sbjct: 135 FEAFDAFKKERYLTFFERSYDILPDDGRMLLHSLFTYDRRWLHEQGIALTMSDLRFLK-F 193
Query: 490 MKEYIFPGGCLPSLSRITSAMSAA 513
++E IFPGG LPS I AA
Sbjct: 194 LRESIFPGGELPSEPDIVDNAQAA 217
>sp|A5U030|MMAA1_MYCTA Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=mmaA1 PE=1 SV=1
Length = 286
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 72/204 (35%), Gaps = 65/204 (31%)
Query: 374 YDLSNELFCLFLDESLTYSCALFKVREVIFL----------------------------- 404
YD+S++ F LFLD + Y+CA F+ ++
Sbjct: 15 YDISDDFFALFLDPTWVYTCAYFERDDMTLEEAQLAKVDLALDKLNLEPGMTLLDVGCGW 74
Query: 405 --GTIEVVKRTGCKYTGITLAEKQL-----KYAGIKVK---EADL-------ERNDR--- 444
+ V++ G+TL+ + A I + EA L E DR
Sbjct: 75 GGALVRAVEKYDVNVIGLTLSRNHYERSKDRLAAIGTQRRAEARLQGWEEFEENVDRIVS 134
Query: 445 -----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERY----------NEFRLSSDF 489
+F E FF ++ DG +L + D R+ ++ R F
Sbjct: 135 FEAFDAFKKERYLTFFERSYDILPDDGRMLLHSLFTYDRRWLHEQGIALTMSDLRFLK-F 193
Query: 490 MKEYIFPGGCLPSLSRITSAMSAA 513
++E IFPGG LPS I AA
Sbjct: 194 LRESIFPGGELPSEPDIVDNAQAA 217
>sp|P0A5Q1|MMAA1_MYCBO Mycolic acid methyltransferase MmaA1 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cmaD PE=3 SV=1
Length = 286
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 72/204 (35%), Gaps = 65/204 (31%)
Query: 374 YDLSNELFCLFLDESLTYSCALFKVREVIFL----------------------------- 404
YD+S++ F LFLD + Y+CA F+ ++
Sbjct: 15 YDISDDFFALFLDPTWVYTCAYFERDDMTLEEAQLAKVDLALDKLNLEPGMTLLDVGCGW 74
Query: 405 --GTIEVVKRTGCKYTGITLAEKQL-----KYAGIKVK---EADL-------ERNDR--- 444
+ V++ G+TL+ + A I + EA L E DR
Sbjct: 75 GGALVRAVEKYDVNVIGLTLSRNHYERSKDRLAAIGTQRRAEARLQGWEEFEENVDRIVS 134
Query: 445 -----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERY----------NEFRLSSDF 489
+F E FF ++ DG +L + D R+ ++ R F
Sbjct: 135 FEAFDAFKKERYLTFFERSYDILPDDGRMLLHSLFTYDRRWLHEQGIALTMSDLRFLK-F 193
Query: 490 MKEYIFPGGCLPSLSRITSAMSAA 513
++E IFPGG LPS I AA
Sbjct: 194 LRESIFPGGELPSEPDIVDNAQAA 217
>sp|A1JL12|TMCA_YERE8 tRNA(Met) cytidine acetyltransferase TmcA OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=tmcA PE=3 SV=1
Length = 677
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 174 AWSAWSFLGSLDSKNLGETSLPYLVTLNPDHAPEHTLLK------WSTG--PPVPFVAA- 224
AW W+ L DS E S P + T N H + LL W G PPVP AA
Sbjct: 97 AWDDWALLPDSDSLRWSEQSAP-ISTPNFIHHMQRQLLASPDVFLWQQGQLPPVPQFAAR 155
Query: 225 ------------SKASLELGHIQGRRGIWFRGAYQGYG 250
+ ++ +QGR+G+W A +G G
Sbjct: 156 PNWQPPDGTPTTEQQAILQRLMQGRQGVWVLTAARGRG 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,607,796
Number of Sequences: 539616
Number of extensions: 8954882
Number of successful extensions: 16307
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16248
Number of HSP's gapped (non-prelim): 58
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)