Query 043102
Match_columns 525
No_of_seqs 532 out of 2534
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 22:45:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 99.9 2.6E-23 8.8E-28 208.9 14.9 161 361-522 11-241 (302)
2 1kpg_A CFA synthase;, cyclopro 99.9 3.8E-22 1.3E-26 198.2 13.8 160 362-522 4-226 (287)
3 2fk8_A Methoxy mycolic acid sy 99.9 1.7E-21 5.8E-26 196.8 14.0 161 359-520 27-250 (318)
4 3bus_A REBM, methyltransferase 99.6 1.4E-15 4.9E-20 149.2 12.3 154 365-522 4-214 (273)
5 3vc1_A Geranyl diphosphate 2-C 99.5 4.7E-15 1.6E-19 149.7 7.7 160 359-522 55-267 (312)
6 2b9w_A Putative aminooxidase; 99.5 4.6E-15 1.6E-19 154.6 7.8 150 112-267 235-423 (424)
7 2o57_A Putative sarcosine dime 99.5 3.1E-13 1.1E-17 134.5 13.4 155 361-522 14-232 (297)
8 1i8t_A UDP-galactopyranose mut 99.3 6.5E-13 2.2E-17 137.8 5.8 127 123-268 222-365 (367)
9 3iv6_A Putative Zn-dependent a 99.2 3.2E-12 1.1E-16 127.7 5.4 109 397-507 45-206 (261)
10 2bi7_A UDP-galactopyranose mut 99.2 2.9E-12 9.8E-17 133.8 5.2 137 112-268 210-368 (384)
11 3dli_A Methyltransferase; PSI- 99.0 2.5E-09 8.5E-14 103.1 12.4 114 399-522 43-182 (240)
12 3kkz_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 106.9 10.3 118 398-522 47-194 (267)
13 3ujc_A Phosphoethanolamine N-m 99.0 6E-10 2.1E-14 107.8 7.8 119 398-522 56-204 (266)
14 4gek_A TRNA (CMO5U34)-methyltr 99.0 9.9E-10 3.4E-14 109.1 9.4 80 398-477 71-183 (261)
15 1dl5_A Protein-L-isoaspartate 98.9 1.4E-10 4.9E-15 117.7 1.9 111 399-512 77-218 (317)
16 3f4k_A Putative methyltransfer 98.9 3.9E-09 1.3E-13 102.1 11.5 118 398-522 47-194 (257)
17 3fpf_A Mtnas, putative unchara 98.9 2.2E-09 7.4E-14 109.2 9.7 117 355-472 54-222 (298)
18 1v0j_A UDP-galactopyranose mut 98.9 4.3E-10 1.5E-14 117.7 4.1 125 124-267 237-384 (399)
19 3qj4_A Renalase; FAD/NAD(P)-bi 98.9 6.3E-09 2.2E-13 105.3 10.9 169 80-268 121-340 (342)
20 3dtn_A Putative methyltransfer 98.9 2.5E-09 8.6E-14 102.2 6.7 123 398-521 45-211 (234)
21 1nkv_A Hypothetical protein YJ 98.8 8.4E-09 2.9E-13 99.7 9.9 118 397-520 36-183 (256)
22 4htf_A S-adenosylmethionine-de 98.8 7.1E-09 2.4E-13 102.4 8.9 122 399-522 70-230 (285)
23 3hnr_A Probable methyltransfer 98.8 1.4E-08 4.7E-13 95.9 10.2 122 397-522 45-199 (220)
24 3ocj_A Putative exported prote 98.8 6.5E-09 2.2E-13 104.3 6.8 124 398-522 119-289 (305)
25 1pjz_A Thiopurine S-methyltran 98.7 3E-08 1E-12 93.9 9.7 109 397-522 22-174 (203)
26 1ri5_A MRNA capping enzyme; me 98.7 5E-08 1.7E-12 96.0 11.3 125 397-522 64-248 (298)
27 3ou2_A SAM-dependent methyltra 98.7 2.4E-08 8.2E-13 93.6 8.5 121 398-521 47-202 (218)
28 1vl5_A Unknown conserved prote 98.7 5.4E-08 1.9E-12 94.6 10.2 121 398-522 38-188 (260)
29 3sm3_A SAM-dependent methyltra 98.7 4.2E-08 1.4E-12 92.9 9.0 122 398-522 31-205 (235)
30 3g2m_A PCZA361.24; SAM-depende 98.7 9E-09 3.1E-13 102.7 4.5 76 399-475 84-193 (299)
31 3e23_A Uncharacterized protein 98.7 5.9E-08 2E-12 91.3 9.7 112 398-522 44-180 (211)
32 3bkx_A SAM-dependent methyltra 98.7 5.9E-08 2E-12 94.9 9.8 124 397-521 43-216 (275)
33 2ivd_A PPO, PPOX, protoporphyr 98.7 2.2E-07 7.4E-12 98.1 14.6 173 78-268 245-471 (478)
34 3dlc_A Putative S-adenosyl-L-m 98.6 1.1E-08 3.8E-13 95.6 3.8 120 400-521 46-200 (219)
35 3lcc_A Putative methyl chlorid 98.6 4E-08 1.4E-12 94.2 7.7 107 399-522 68-205 (235)
36 2kw5_A SLR1183 protein; struct 98.6 1.2E-07 4E-12 88.4 10.1 110 400-522 32-169 (202)
37 3orh_A Guanidinoacetate N-meth 98.6 1.1E-08 3.7E-13 99.5 2.9 75 399-473 62-171 (236)
38 2r3s_A Uncharacterized protein 98.6 7.9E-08 2.7E-12 96.9 9.3 123 398-522 166-321 (335)
39 3h2b_A SAM-dependent methyltra 98.6 4.3E-08 1.5E-12 91.5 6.6 113 398-522 42-180 (203)
40 3mgg_A Methyltransferase; NYSG 98.6 9E-08 3.1E-12 93.7 8.6 124 398-522 38-196 (276)
41 3gwz_A MMCR; methyltransferase 98.6 2.5E-07 8.7E-12 95.6 12.3 121 399-523 204-355 (369)
42 2gb4_A Thiopurine S-methyltran 98.6 1.6E-07 5.4E-12 92.8 10.2 108 398-522 69-225 (252)
43 1y8c_A S-adenosylmethionine-de 98.6 1.2E-07 4E-12 90.4 8.9 76 397-473 37-143 (246)
44 3i53_A O-methyltransferase; CO 98.6 2.8E-07 9.4E-12 93.5 12.0 118 399-522 171-319 (332)
45 3l8d_A Methyltransferase; stru 98.6 1.1E-07 3.7E-12 90.9 8.4 118 398-522 54-198 (242)
46 3jwh_A HEN1; methyltransferase 98.6 2.2E-07 7.7E-12 87.8 10.5 119 398-521 30-189 (217)
47 3dh0_A SAM dependent methyltra 98.6 2.3E-07 8E-12 87.3 10.5 110 398-521 38-178 (219)
48 3e8s_A Putative SAM dependent 98.6 9.7E-08 3.3E-12 89.7 7.5 121 398-522 53-207 (227)
49 3dp7_A SAM-dependent methyltra 98.6 1.6E-07 5.6E-12 96.9 9.9 121 399-521 181-339 (363)
50 1xxl_A YCGJ protein; structura 98.5 2E-07 6.8E-12 89.9 9.7 122 397-522 21-172 (239)
51 2y1w_A Histone-arginine methyl 98.5 4.9E-08 1.7E-12 100.5 5.5 112 396-508 49-197 (348)
52 2vdw_A Vaccinia virus capping 98.5 1.9E-07 6.6E-12 94.5 9.8 76 399-474 50-171 (302)
53 1qzz_A RDMB, aclacinomycin-10- 98.5 1.8E-07 6.3E-12 96.0 9.6 121 399-522 184-337 (374)
54 2yqz_A Hypothetical protein TT 98.5 5.1E-08 1.8E-12 94.2 4.7 119 398-520 40-192 (263)
55 3jwg_A HEN1, methyltransferase 98.5 3.5E-07 1.2E-11 86.5 10.1 119 398-521 30-189 (219)
56 4fsd_A Arsenic methyltransfera 98.5 2.5E-07 8.7E-12 96.2 9.6 120 397-520 83-247 (383)
57 1x19_A CRTF-related protein; m 98.5 5.1E-07 1.7E-11 92.6 11.7 118 399-522 192-346 (359)
58 2ex4_A Adrenal gland protein A 98.5 6E-08 2.1E-12 93.4 4.4 113 398-522 80-223 (241)
59 2p7i_A Hypothetical protein; p 98.5 2.3E-07 7.8E-12 88.2 8.4 122 397-521 42-196 (250)
60 3mti_A RRNA methylase; SAM-dep 98.5 1E-07 3.4E-12 87.8 5.7 76 398-474 23-137 (185)
61 3mcz_A O-methyltransferase; ad 98.5 2.6E-07 9E-12 94.2 9.4 121 398-520 180-335 (352)
62 3p2e_A 16S rRNA methylase; met 98.5 6.1E-08 2.1E-12 93.9 4.4 112 399-521 26-182 (225)
63 3grz_A L11 mtase, ribosomal pr 98.5 1.4E-07 4.7E-12 88.5 6.4 98 398-521 61-182 (205)
64 2xvm_A Tellurite resistance pr 98.5 5.9E-07 2E-11 82.8 10.0 109 397-521 32-170 (199)
65 3tfw_A Putative O-methyltransf 98.5 4E-07 1.4E-11 88.9 9.2 80 397-476 63-174 (248)
66 3dr5_A Putative O-methyltransf 98.4 1.2E-07 4.2E-12 91.5 5.2 78 399-476 58-167 (221)
67 3njr_A Precorrin-6Y methylase; 98.4 5E-07 1.7E-11 85.7 9.0 75 398-474 56-156 (204)
68 3e05_A Precorrin-6Y C5,15-meth 98.4 8.2E-07 2.8E-11 83.2 10.4 76 398-473 41-143 (204)
69 3duw_A OMT, O-methyltransferas 98.4 4.8E-07 1.7E-11 85.8 8.8 80 397-476 58-171 (223)
70 1tw3_A COMT, carminomycin 4-O- 98.4 4.5E-07 1.6E-11 92.7 9.2 121 399-522 185-337 (360)
71 3bkw_A MLL3908 protein, S-aden 98.4 2.1E-07 7.2E-12 88.8 6.2 122 397-522 43-212 (243)
72 1xtp_A LMAJ004091AAA; SGPP, st 98.4 2.3E-07 7.8E-12 89.3 6.5 114 398-522 94-236 (254)
73 3g07_A 7SK snRNA methylphospha 98.4 1.5E-07 5E-12 94.2 5.1 43 396-438 45-94 (292)
74 3g5t_A Trans-aconitate 3-methy 98.4 2.9E-07 1E-11 91.7 7.2 116 398-516 37-196 (299)
75 3ggd_A SAM-dependent methyltra 98.4 2.6E-07 8.9E-12 88.8 6.6 118 398-521 57-216 (245)
76 4e2x_A TCAB9; kijanose, tetron 98.4 2.6E-07 8.9E-12 96.6 7.0 111 398-522 108-251 (416)
77 2g72_A Phenylethanolamine N-me 98.4 5.6E-07 1.9E-11 89.2 9.0 114 397-521 71-253 (289)
78 3g5l_A Putative S-adenosylmeth 98.4 1.5E-07 5.2E-12 90.9 4.7 124 397-522 44-214 (253)
79 2p8j_A S-adenosylmethionine-de 98.4 3.7E-07 1.3E-11 85.2 7.3 120 398-518 24-177 (209)
80 2ip2_A Probable phenazine-spec 98.4 3.6E-07 1.2E-11 92.5 7.7 121 399-522 169-320 (334)
81 3gu3_A Methyltransferase; alph 98.4 4.5E-07 1.5E-11 89.9 7.9 124 397-521 22-187 (284)
82 2a14_A Indolethylamine N-methy 98.4 4.7E-07 1.6E-11 89.0 7.7 113 397-521 55-235 (263)
83 3ege_A Putative methyltransfer 98.4 1E-07 3.5E-12 93.2 2.7 112 397-520 34-174 (261)
84 3b3j_A Histone-arginine methyl 98.4 1.3E-07 4.6E-12 101.8 3.8 109 397-507 158-304 (480)
85 3tr6_A O-methyltransferase; ce 98.4 1.5E-06 5E-11 82.5 10.4 81 397-477 64-179 (225)
86 1wzn_A SAM-dependent methyltra 98.4 1.9E-07 6.7E-12 90.0 4.2 75 399-474 43-147 (252)
87 3ccf_A Cyclopropane-fatty-acyl 98.4 1.4E-06 4.6E-11 85.8 10.2 121 398-521 58-207 (279)
88 2aot_A HMT, histamine N-methyl 98.3 2E-06 7E-11 85.4 11.5 114 399-520 54-217 (292)
89 3r3h_A O-methyltransferase, SA 98.3 5E-07 1.7E-11 88.3 6.6 81 397-477 60-175 (242)
90 3pfg_A N-methyltransferase; N, 98.3 2.5E-07 8.6E-12 90.0 4.4 78 399-477 52-156 (263)
91 3d2l_A SAM-dependent methyltra 98.3 1.1E-06 3.9E-11 83.6 8.5 73 399-473 35-138 (243)
92 1zx0_A Guanidinoacetate N-meth 98.3 1.6E-07 5.5E-12 90.3 2.4 117 358-474 11-172 (236)
93 3p9n_A Possible methyltransfer 98.3 2.2E-06 7.6E-11 79.4 9.2 79 397-475 44-156 (189)
94 3ntv_A MW1564 protein; rossman 98.3 9.3E-07 3.2E-11 85.2 6.6 81 397-477 71-181 (232)
95 2p35_A Trans-aconitate 2-methy 98.3 8.6E-07 2.9E-11 85.5 6.4 122 398-520 34-186 (259)
96 4hg2_A Methyltransferase type 98.2 3.7E-07 1.2E-11 90.5 3.3 76 399-475 41-138 (257)
97 3c3y_A Pfomt, O-methyltransfer 98.2 2E-06 6.8E-11 83.5 8.4 80 397-476 70-185 (237)
98 3c3p_A Methyltransferase; NP_9 98.2 9.1E-07 3.1E-11 83.4 5.7 80 397-476 56-164 (210)
99 3hm2_A Precorrin-6Y C5,15-meth 98.2 1.8E-06 6.1E-11 78.3 7.4 76 399-474 27-129 (178)
100 1sui_A Caffeoyl-COA O-methyltr 98.2 1.3E-06 4.6E-11 85.5 7.0 81 397-477 79-195 (247)
101 3m70_A Tellurite resistance pr 98.2 1.6E-06 5.6E-11 85.4 7.7 78 397-475 120-226 (286)
102 4a6d_A Hydroxyindole O-methylt 98.2 4.1E-06 1.4E-10 86.3 10.7 121 399-522 181-332 (353)
103 3opn_A Putative hemolysin; str 98.2 4.8E-07 1.6E-11 88.3 3.4 115 399-522 39-182 (232)
104 2nxc_A L11 mtase, ribosomal pr 98.2 2.2E-06 7.4E-11 84.2 8.1 97 398-521 121-241 (254)
105 1ve3_A Hypothetical protein PH 98.2 2.3E-06 7.7E-11 80.7 7.8 77 398-475 39-145 (227)
106 2avn_A Ubiquinone/menaquinone 98.2 1.3E-06 4.5E-11 85.2 6.3 114 360-474 14-154 (260)
107 3i6d_A Protoporphyrinogen oxid 98.2 1.6E-05 5.3E-10 82.9 14.8 145 112-267 265-465 (470)
108 3nks_A Protoporphyrinogen oxid 98.2 1.7E-05 5.9E-10 83.3 14.4 150 113-269 268-473 (477)
109 3cgg_A SAM-dependent methyltra 98.2 3.1E-06 1.1E-10 77.2 7.6 100 398-522 47-173 (195)
110 1dus_A MJ0882; hypothetical pr 98.2 2.5E-06 8.7E-11 77.7 6.7 77 398-475 53-160 (194)
111 3lst_A CALO1 methyltransferase 98.2 2.6E-06 8.8E-11 87.1 7.5 120 399-523 186-335 (348)
112 3u81_A Catechol O-methyltransf 98.2 3E-06 1E-10 80.7 7.5 80 397-477 58-175 (221)
113 3eey_A Putative rRNA methylase 98.1 2E-06 7E-11 79.8 6.0 77 398-474 23-141 (197)
114 2fca_A TRNA (guanine-N(7)-)-me 98.1 3.6E-06 1.2E-10 80.3 7.7 75 398-472 39-153 (213)
115 3bxo_A N,N-dimethyltransferase 98.1 1.4E-06 4.9E-11 82.7 4.8 79 398-477 41-146 (239)
116 3bgv_A MRNA CAP guanine-N7 met 98.1 1.8E-06 6.2E-11 86.6 5.8 123 398-521 35-229 (313)
117 3dxy_A TRNA (guanine-N(7)-)-me 98.1 3E-06 1E-10 81.5 7.0 76 398-473 35-151 (218)
118 3thr_A Glycine N-methyltransfe 98.1 3.7E-06 1.3E-10 82.9 7.8 75 398-473 58-176 (293)
119 2gpy_A O-methyltransferase; st 98.1 3E-06 1E-10 81.1 6.9 80 397-476 54-164 (233)
120 3mq2_A 16S rRNA methyltransfer 98.1 2.1E-06 7.1E-11 81.2 5.6 74 399-472 29-140 (218)
121 2qe6_A Uncharacterized protein 98.1 1.2E-05 4.1E-10 80.0 11.1 115 399-519 79-237 (274)
122 2esr_A Methyltransferase; stru 98.1 3.4E-06 1.2E-10 76.9 6.2 80 397-476 31-142 (177)
123 3cc8_A Putative methyltransfer 98.1 3.2E-06 1.1E-10 79.4 6.1 123 398-522 33-183 (230)
124 3i9f_A Putative type 11 methyl 98.1 4.1E-06 1.4E-10 75.7 6.5 107 399-522 19-146 (170)
125 3cbg_A O-methyltransferase; cy 98.1 3.5E-06 1.2E-10 81.3 6.4 81 397-477 72-187 (232)
126 2frn_A Hypothetical protein PH 98.1 1.1E-05 3.6E-10 80.3 10.0 102 398-520 126-253 (278)
127 2i62_A Nicotinamide N-methyltr 98.1 5.2E-06 1.8E-10 80.1 7.4 113 398-522 57-237 (265)
128 1xdz_A Methyltransferase GIDB; 98.1 4.2E-06 1.4E-10 80.8 6.3 74 398-471 71-173 (240)
129 3reo_A (ISO)eugenol O-methyltr 98.0 5.7E-06 1.9E-10 85.6 7.6 123 399-523 205-354 (368)
130 2avd_A Catechol-O-methyltransf 98.0 5.4E-06 1.8E-10 78.7 6.8 81 397-477 69-184 (229)
131 2hnk_A SAM-dependent O-methylt 98.0 5.2E-06 1.8E-10 80.0 6.7 80 397-476 60-185 (239)
132 1vlm_A SAM-dependent methyltra 98.0 4.5E-06 1.5E-10 79.1 6.0 118 398-523 48-187 (219)
133 1jsx_A Glucose-inhibited divis 98.0 7.9E-06 2.7E-10 76.2 6.6 76 397-472 65-165 (207)
134 2fhp_A Methylase, putative; al 98.0 8.7E-06 3E-10 74.3 6.7 79 397-475 44-157 (187)
135 3g89_A Ribosomal RNA small sub 98.0 6.3E-06 2.1E-10 80.9 6.0 75 398-472 81-184 (249)
136 3lov_A Protoporphyrinogen oxid 98.0 5.5E-05 1.9E-09 79.6 13.6 147 112-268 266-463 (475)
137 3lpm_A Putative methyltransfer 98.0 9.7E-06 3.3E-10 79.2 7.1 73 398-470 50-174 (259)
138 3ofk_A Nodulation protein S; N 98.0 4.8E-06 1.6E-10 78.2 4.5 74 399-473 53-155 (216)
139 3lbf_A Protein-L-isoaspartate 97.9 1.5E-06 5.1E-11 81.5 0.9 104 397-502 77-204 (210)
140 3gdh_A Trimethylguanosine synt 97.9 7.4E-07 2.5E-11 85.6 -1.3 74 397-471 78-180 (241)
141 3p9c_A Caffeic acid O-methyltr 97.9 1.2E-05 4.2E-10 83.1 7.5 123 399-523 203-352 (364)
142 3ckk_A TRNA (guanine-N(7)-)-me 97.9 1.1E-05 3.7E-10 78.6 6.7 75 399-473 48-169 (235)
143 4dsg_A UDP-galactopyranose mut 97.9 7.7E-05 2.6E-09 79.9 14.0 148 117-267 251-452 (484)
144 1yzh_A TRNA (guanine-N(7)-)-me 97.9 1.5E-05 5.3E-10 75.2 7.6 75 398-472 42-156 (214)
145 3evz_A Methyltransferase; NYSG 97.9 9.9E-06 3.4E-10 77.0 6.2 74 398-471 56-178 (230)
146 2vvm_A Monoamine oxidase N; FA 97.9 4.4E-05 1.5E-09 80.9 12.0 146 112-267 288-482 (495)
147 3mb5_A SAM-dependent methyltra 97.9 6.9E-06 2.4E-10 79.4 5.0 77 397-473 93-195 (255)
148 1l3i_A Precorrin-6Y methyltran 97.9 1.9E-05 6.5E-10 71.7 7.6 76 397-473 33-135 (192)
149 3r0q_C Probable protein argini 97.9 8.5E-06 2.9E-10 84.7 5.7 77 396-474 62-171 (376)
150 1ws6_A Methyltransferase; stru 97.9 1.5E-05 5.3E-10 71.4 6.7 77 398-476 42-151 (171)
151 2vdv_E TRNA (guanine-N(7)-)-me 97.9 1.6E-05 5.6E-10 77.0 6.9 74 399-472 51-173 (246)
152 2ift_A Putative methylase HI07 97.9 2.6E-05 8.8E-10 73.5 7.9 79 398-476 54-167 (201)
153 2fpo_A Methylase YHHF; structu 97.9 3.6E-05 1.2E-09 72.6 8.8 79 397-475 54-163 (202)
154 2yxd_A Probable cobalt-precorr 97.9 6E-05 2.1E-09 67.9 9.9 97 397-522 35-155 (183)
155 3m33_A Uncharacterized protein 97.9 4.3E-06 1.5E-10 79.9 2.3 71 398-469 49-139 (226)
156 2yxe_A Protein-L-isoaspartate 97.9 1.8E-06 6.2E-11 81.2 -0.4 107 397-504 77-209 (215)
157 3q7e_A Protein arginine N-meth 97.8 1.3E-05 4.6E-10 82.3 5.8 76 396-473 65-174 (349)
158 4df3_A Fibrillarin-like rRNA/T 97.8 1.1E-05 3.8E-10 79.1 4.7 74 398-471 78-181 (233)
159 3uwp_A Histone-lysine N-methyl 97.8 2.5E-05 8.6E-10 82.8 7.4 81 397-477 173-293 (438)
160 2yvl_A TRMI protein, hypotheti 97.8 3.3E-05 1.1E-09 73.9 7.4 76 397-473 91-191 (248)
161 3dmg_A Probable ribosomal RNA 97.8 2.1E-05 7.2E-10 82.3 6.5 74 398-472 234-340 (381)
162 3kr9_A SAM-dependent methyltra 97.8 3.4E-05 1.2E-09 75.3 7.4 76 399-474 17-121 (225)
163 2gs9_A Hypothetical protein TT 97.8 2.4E-05 8.2E-10 73.1 6.1 114 397-511 36-170 (211)
164 1nt2_A Fibrillarin-like PRE-rR 97.8 3.4E-05 1.2E-09 73.6 7.0 74 398-471 58-160 (210)
165 4dcm_A Ribosomal RNA large sub 97.8 1.5E-05 5.3E-10 83.0 5.0 73 399-471 224-333 (375)
166 2fyt_A Protein arginine N-meth 97.8 2.8E-05 9.4E-10 79.8 6.6 73 396-470 63-169 (340)
167 1u2z_A Histone-lysine N-methyl 97.8 4E-05 1.4E-09 81.7 7.9 78 399-476 244-363 (433)
168 2igt_A SAM dependent methyltra 97.7 5.1E-05 1.8E-09 77.8 8.4 75 399-474 155-274 (332)
169 3k6r_A Putative transferase PH 97.7 1.4E-05 4.9E-10 80.3 3.7 78 398-475 126-228 (278)
170 1fp1_D Isoliquiritigenin 2'-O- 97.7 1.1E-05 3.6E-10 83.3 2.8 121 399-522 211-358 (372)
171 3adn_A Spermidine synthase; am 97.7 2.8E-05 9.5E-10 78.5 5.7 75 399-473 85-199 (294)
172 3lec_A NADB-rossmann superfami 97.7 5E-05 1.7E-09 74.4 7.3 90 385-474 8-127 (230)
173 2zfu_A Nucleomethylin, cerebra 97.7 8.9E-06 3E-10 76.5 1.3 100 398-521 68-176 (215)
174 3hp7_A Hemolysin, putative; st 97.7 7.7E-06 2.6E-10 82.8 0.9 113 399-524 87-232 (291)
175 4azs_A Methyltransferase WBDD; 97.7 1.9E-05 6.4E-10 86.6 3.9 79 399-478 68-179 (569)
176 3giw_A Protein of unknown func 97.7 8.4E-05 2.9E-09 74.7 8.1 114 400-518 81-241 (277)
177 3fzg_A 16S rRNA methylase; met 97.7 1.4E-05 4.9E-10 76.5 2.3 74 398-472 50-152 (200)
178 2pjd_A Ribosomal RNA small sub 97.6 3E-05 1E-09 79.3 4.9 75 399-473 198-304 (343)
179 1jg1_A PIMT;, protein-L-isoasp 97.6 6.1E-06 2.1E-10 79.3 -0.4 107 397-503 91-222 (235)
180 1fp2_A Isoflavone O-methyltran 97.6 3E-05 1E-09 79.2 4.7 120 399-522 190-339 (352)
181 4hc4_A Protein arginine N-meth 97.6 4.7E-05 1.6E-09 79.6 6.3 76 396-473 82-190 (376)
182 3gnl_A Uncharacterized protein 97.6 7.4E-05 2.5E-09 73.8 7.3 76 399-474 23-127 (244)
183 1yb2_A Hypothetical protein TA 97.6 3.6E-05 1.2E-09 76.0 5.0 77 397-473 110-212 (275)
184 4dmg_A Putative uncharacterize 97.6 7.3E-05 2.5E-09 78.5 7.4 77 398-475 215-329 (393)
185 1o54_A SAM-dependent O-methylt 97.6 4.5E-05 1.5E-09 75.1 5.5 77 397-473 112-214 (277)
186 2pxx_A Uncharacterized protein 97.6 3.7E-05 1.3E-09 71.4 4.5 77 398-475 43-162 (215)
187 1g6q_1 HnRNP arginine N-methyl 97.6 5.8E-05 2E-09 76.9 6.0 75 396-472 37-145 (328)
188 1xj5_A Spermidine synthase 1; 97.6 4E-05 1.4E-09 78.8 4.7 74 399-472 122-235 (334)
189 2o07_A Spermidine synthase; st 97.5 4.2E-05 1.4E-09 77.5 4.2 76 399-474 97-211 (304)
190 1nv8_A HEMK protein; class I a 97.5 0.00012 4.2E-09 73.1 7.6 73 399-471 125-248 (284)
191 3a27_A TYW2, uncharacterized p 97.5 5.4E-05 1.8E-09 75.0 4.9 79 398-476 120-223 (272)
192 2b3t_A Protein methyltransfera 97.5 6.4E-05 2.2E-09 74.1 5.3 74 398-471 110-237 (276)
193 3gjy_A Spermidine synthase; AP 97.5 7.9E-05 2.7E-09 76.3 6.1 76 400-476 92-204 (317)
194 1i1n_A Protein-L-isoaspartate 97.5 3.2E-05 1.1E-09 73.3 3.0 105 398-503 78-216 (226)
195 2b2c_A Spermidine synthase; be 97.5 4.6E-05 1.6E-09 77.6 4.3 74 399-472 110-222 (314)
196 3htx_A HEN1; HEN1, small RNA m 97.5 0.00024 8.3E-09 80.9 10.5 76 398-474 722-836 (950)
197 1vbf_A 231AA long hypothetical 97.5 1.5E-05 5.2E-10 75.7 0.6 78 397-475 70-168 (231)
198 1uir_A Polyamine aminopropyltr 97.5 6.1E-05 2.1E-09 76.4 5.1 76 399-474 79-197 (314)
199 2ozv_A Hypothetical protein AT 97.5 6.3E-05 2.2E-09 73.9 4.8 74 398-471 37-169 (260)
200 4dzr_A Protein-(glutamine-N5) 97.5 4.2E-05 1.4E-09 70.9 3.3 41 399-439 32-79 (215)
201 2pwy_A TRNA (adenine-N(1)-)-me 97.5 5.9E-05 2E-09 72.6 4.3 76 397-472 96-198 (258)
202 1fbn_A MJ fibrillarin homologu 97.5 7.1E-05 2.4E-09 71.6 4.9 74 398-471 75-177 (230)
203 3ka7_A Oxidoreductase; structu 97.5 0.0003 1E-08 72.5 10.0 173 79-268 207-425 (425)
204 1yvv_A Amine oxidase, flavin-c 97.5 0.00063 2.2E-08 67.5 11.8 170 72-267 107-324 (336)
205 2bm8_A Cephalosporin hydroxyla 97.5 3.3E-05 1.1E-09 75.0 2.4 76 398-473 82-188 (236)
206 3nrn_A Uncharacterized protein 97.5 0.00092 3.1E-08 69.2 13.4 170 79-270 200-406 (421)
207 1ixk_A Methyltransferase; open 97.5 0.00014 4.8E-09 73.7 6.8 79 398-476 119-250 (315)
208 1i9g_A Hypothetical protein RV 97.5 7.3E-05 2.5E-09 73.1 4.5 78 397-474 99-205 (280)
209 1iy9_A Spermidine synthase; ro 97.5 7.5E-05 2.6E-09 74.4 4.5 75 399-473 77-190 (275)
210 1s3e_A Amine oxidase [flavin-c 97.4 0.00098 3.4E-08 71.2 13.4 79 79-169 223-307 (520)
211 2ipx_A RRNA 2'-O-methyltransfe 97.4 0.00016 5.3E-09 69.2 6.4 74 398-471 78-181 (233)
212 2pt6_A Spermidine synthase; tr 97.4 7.2E-05 2.4E-09 76.3 4.1 76 399-474 118-232 (321)
213 1inl_A Spermidine synthase; be 97.4 6.7E-05 2.3E-09 75.5 3.8 75 399-473 92-206 (296)
214 3ajd_A Putative methyltransfer 97.4 0.00021 7.1E-09 70.7 7.3 78 398-475 84-214 (274)
215 3tma_A Methyltransferase; thum 97.4 0.00031 1.1E-08 71.9 8.4 75 398-472 204-317 (354)
216 2qm3_A Predicted methyltransfe 97.4 0.0003 1E-08 72.8 8.3 78 397-474 172-279 (373)
217 1mjf_A Spermidine synthase; sp 97.4 0.00011 3.9E-09 73.1 4.9 75 399-474 77-195 (281)
218 1p91_A Ribosomal RNA large sub 97.4 4.1E-05 1.4E-09 74.5 1.6 76 398-474 86-180 (269)
219 2b78_A Hypothetical protein SM 97.4 0.00018 6.2E-09 75.0 6.6 76 398-474 213-333 (385)
220 3cvo_A Methyltransferase-like 97.4 0.00032 1.1E-08 67.3 7.8 79 399-477 32-159 (202)
221 2pbf_A Protein-L-isoaspartate 97.4 3.6E-05 1.2E-09 73.0 1.1 104 397-501 80-223 (227)
222 1g8a_A Fibrillarin-like PRE-rR 97.4 0.00015 5.1E-09 68.8 5.3 74 398-471 74-177 (227)
223 2i7c_A Spermidine synthase; tr 97.4 0.00011 3.6E-09 73.5 4.3 75 399-473 80-193 (283)
224 1o9g_A RRNA methyltransferase; 97.3 0.0002 6.8E-09 69.3 6.0 38 399-436 53-99 (250)
225 1zg3_A Isoflavanone 4'-O-methy 97.3 8.4E-05 2.9E-09 76.1 3.5 121 399-522 195-345 (358)
226 2b25_A Hypothetical protein; s 97.3 0.0001 3.5E-09 74.8 4.0 77 397-473 105-220 (336)
227 3bzb_A Uncharacterized protein 97.3 0.00043 1.5E-08 68.6 8.5 74 397-471 79-204 (281)
228 1r18_A Protein-L-isoaspartate( 97.3 1.7E-05 5.6E-10 75.7 -2.2 75 398-473 85-195 (227)
229 2as0_A Hypothetical protein PH 97.3 0.00034 1.2E-08 72.8 7.4 78 397-475 217-338 (396)
230 3bwc_A Spermidine synthase; SA 97.3 0.00022 7.4E-09 72.0 5.4 75 399-473 97-211 (304)
231 2cmg_A Spermidine synthase; tr 97.3 5.3E-05 1.8E-09 75.1 0.8 74 399-473 74-172 (262)
232 1wxx_A TT1595, hypothetical pr 97.2 0.00038 1.3E-08 72.2 6.7 77 398-475 210-328 (382)
233 3m6w_A RRNA methylase; rRNA me 97.1 0.00061 2.1E-08 73.1 7.6 78 399-476 103-233 (464)
234 4gde_A UDP-galactopyranose mut 97.1 0.0023 7.7E-08 67.5 11.6 57 210-267 415-476 (513)
235 3c0k_A UPF0064 protein YCCW; P 97.1 0.00065 2.2E-08 70.8 7.2 77 397-474 220-341 (396)
236 3v97_A Ribosomal RNA large sub 97.1 0.0006 2.1E-08 76.7 7.0 77 397-474 539-659 (703)
237 1sez_A Protoporphyrinogen oxid 97.1 0.0017 6E-08 68.6 10.2 59 209-267 431-490 (504)
238 1af7_A Chemotaxis receptor met 97.1 0.00039 1.3E-08 69.6 4.7 72 399-470 107-250 (274)
239 2ld4_A Anamorsin; methyltransf 97.1 0.00022 7.5E-09 64.9 2.7 96 397-519 12-130 (176)
240 2frx_A Hypothetical protein YE 97.0 0.00087 3E-08 72.1 7.6 78 398-475 118-249 (479)
241 2yx1_A Hypothetical protein MJ 97.0 0.00066 2.2E-08 69.4 5.9 77 398-476 196-295 (336)
242 3m4x_A NOL1/NOP2/SUN family pr 97.0 0.00093 3.2E-08 71.5 6.9 78 399-476 107-238 (456)
243 2yg5_A Putrescine oxidase; oxi 96.9 0.0013 4.3E-08 68.6 7.6 77 79-168 223-306 (453)
244 1b37_A Protein (polyamine oxid 96.9 0.017 5.9E-07 60.7 15.9 59 112-170 246-312 (472)
245 3id6_C Fibrillarin-like rRNA/T 96.8 0.0022 7.5E-08 62.6 7.1 74 398-471 77-180 (232)
246 2yxl_A PH0851 protein, 450AA l 96.7 0.0023 7.7E-08 68.0 7.5 79 398-476 260-393 (450)
247 2jae_A L-amino acid oxidase; o 96.7 0.0026 8.8E-08 67.1 7.8 55 112-167 269-331 (489)
248 1sqg_A SUN protein, FMU protei 96.7 0.002 6.7E-08 68.0 6.5 79 398-476 247-378 (429)
249 3q87_B N6 adenine specific DNA 96.6 0.0055 1.9E-07 55.8 8.6 95 398-522 24-147 (170)
250 3sso_A Methyltransferase; macr 96.6 0.00048 1.7E-08 72.7 0.9 104 364-474 181-326 (419)
251 2qfm_A Spermine synthase; sper 96.2 0.0044 1.5E-07 64.5 5.7 77 399-475 190-317 (364)
252 1zq9_A Probable dimethyladenos 96.2 0.0072 2.5E-07 60.2 7.0 42 397-439 28-75 (285)
253 3tm4_A TRNA (guanine N2-)-meth 96.2 0.0055 1.9E-07 63.3 6.4 42 399-441 219-268 (373)
254 3lcv_B Sisomicin-gentamicin re 96.1 0.003 1E-07 63.2 3.8 74 399-473 134-237 (281)
255 4gut_A Lysine-specific histone 96.1 0.033 1.1E-06 63.3 12.9 84 74-169 533-626 (776)
256 1wy7_A Hypothetical protein PH 96.1 0.011 3.7E-07 54.8 7.1 72 397-471 49-148 (207)
257 2plw_A Ribosomal RNA methyltra 96.0 0.00067 2.3E-08 62.7 -1.4 27 399-425 24-59 (201)
258 3dou_A Ribosomal RNA large sub 95.9 0.006 2E-07 57.1 4.5 74 399-474 27-141 (191)
259 2h00_A Methyltransferase 10 do 95.9 0.0073 2.5E-07 58.1 5.2 113 398-519 66-233 (254)
260 1rsg_A FMS1 protein; FAD bindi 95.8 0.031 1.1E-06 59.6 10.4 60 112-171 233-309 (516)
261 3k7m_X 6-hydroxy-L-nicotine ox 95.8 0.058 2E-06 55.4 12.0 56 112-167 235-296 (431)
262 2jjq_A Uncharacterized RNA met 95.8 0.0088 3E-07 63.3 5.9 73 398-472 291-387 (425)
263 2dul_A N(2),N(2)-dimethylguano 95.8 0.0078 2.7E-07 62.7 5.4 75 398-472 48-164 (378)
264 2h1r_A Dimethyladenosine trans 95.8 0.011 3.9E-07 59.2 6.3 42 397-439 42-89 (299)
265 2nyu_A Putative ribosomal RNA 95.5 0.003 1E-07 57.9 0.9 23 452-474 125-147 (196)
266 2f8l_A Hypothetical protein LM 95.5 0.011 3.6E-07 60.2 5.1 74 399-472 132-256 (344)
267 3k0b_A Predicted N6-adenine-sp 95.3 0.014 4.7E-07 61.1 5.2 58 415-472 264-350 (393)
268 1ej0_A FTSJ; methyltransferase 95.3 0.0022 7.5E-08 56.7 -0.8 77 398-475 23-139 (180)
269 2iid_A L-amino-acid oxidase; f 95.3 0.087 3E-06 55.4 11.3 31 237-267 449-481 (498)
270 2z3y_A Lysine-specific histone 95.2 0.11 3.9E-06 57.5 12.3 32 236-267 621-655 (662)
271 3frh_A 16S rRNA methylase; met 95.1 0.011 3.7E-07 58.5 3.3 73 399-472 107-206 (253)
272 1ne2_A Hypothetical protein TA 95.1 0.013 4.5E-07 54.0 3.7 72 397-471 51-146 (200)
273 3o4f_A Spermidine synthase; am 94.8 0.025 8.7E-07 57.1 5.0 75 400-474 86-200 (294)
274 1qam_A ERMC' methyltransferase 94.6 0.038 1.3E-06 53.5 5.8 39 397-436 30-74 (244)
275 2xyq_A Putative 2'-O-methyl tr 94.5 0.018 6.1E-07 58.0 3.2 72 398-474 64-173 (290)
276 2wk1_A NOVP; transferase, O-me 94.5 0.025 8.5E-07 56.8 4.1 76 399-474 108-246 (282)
277 3b5i_A S-adenosyl-L-methionine 94.3 0.059 2E-06 56.2 6.6 72 449-521 202-295 (374)
278 4gqb_A Protein arginine N-meth 94.2 0.063 2.2E-06 59.7 7.1 69 400-469 360-464 (637)
279 2xag_A Lysine-specific histone 94.2 0.22 7.7E-06 57.1 11.8 32 236-267 792-826 (852)
280 2b9e_A NOL1/NOP2/SUN domain fa 94.1 0.11 3.9E-06 52.4 8.2 43 398-440 103-153 (309)
281 2wa2_A Non-structural protein 94.1 0.0049 1.7E-07 61.4 -1.9 74 398-474 83-195 (276)
282 2okc_A Type I restriction enzy 94.1 0.035 1.2E-06 58.6 4.6 74 399-472 173-307 (445)
283 3axs_A Probable N(2),N(2)-dime 94.1 0.065 2.2E-06 56.1 6.5 74 399-472 54-158 (392)
284 3ldg_A Putative uncharacterize 94.0 0.088 3E-06 54.9 7.4 58 415-472 257-343 (384)
285 3tqs_A Ribosomal RNA small sub 93.8 0.038 1.3E-06 54.4 3.9 39 397-436 29-73 (255)
286 2oxt_A Nucleoside-2'-O-methylt 93.7 0.0054 1.8E-07 60.8 -2.5 73 399-474 76-187 (265)
287 2p41_A Type II methyltransfera 93.5 0.011 3.7E-07 59.7 -0.7 75 399-475 84-194 (305)
288 3ldu_A Putative methylase; str 93.5 0.059 2E-06 56.1 4.8 58 415-472 258-344 (385)
289 3ll7_A Putative methyltransfer 93.5 0.071 2.4E-06 56.2 5.5 41 398-439 94-142 (410)
290 1m6y_A S-adenosyl-methyltransf 93.2 0.059 2E-06 54.4 4.3 41 398-438 27-74 (301)
291 2efj_A 3,7-dimethylxanthine me 93.2 0.086 2.9E-06 55.2 5.5 72 449-521 202-289 (384)
292 2r6z_A UPF0341 protein in RSP 93.1 0.033 1.1E-06 54.9 2.1 40 399-439 85-137 (258)
293 3gru_A Dimethyladenosine trans 92.9 0.084 2.9E-06 53.1 4.8 39 397-436 50-94 (295)
294 1uwv_A 23S rRNA (uracil-5-)-me 92.7 0.089 3E-06 55.4 4.9 42 398-440 287-334 (433)
295 1m6e_X S-adenosyl-L-methionnin 92.2 0.14 4.7E-06 53.1 5.4 72 449-521 186-277 (359)
296 3fut_A Dimethyladenosine trans 92.0 0.072 2.5E-06 52.9 2.9 38 396-435 46-89 (271)
297 3uzu_A Ribosomal RNA small sub 91.4 0.099 3.4E-06 52.1 3.2 37 397-434 42-88 (279)
298 3c6k_A Spermine synthase; sper 91.4 0.22 7.4E-06 52.1 5.8 76 399-474 207-333 (381)
299 3bt7_A TRNA (uracil-5-)-methyl 91.1 0.19 6.4E-06 51.6 5.0 41 399-440 215-261 (369)
300 2ih2_A Modification methylase 90.7 0.079 2.7E-06 54.6 1.8 33 398-430 40-80 (421)
301 3kkj_A Amine oxidase, flavin-c 90.6 0.1 3.5E-06 47.1 2.2 52 209-266 272-323 (336)
302 3ftd_A Dimethyladenosine trans 90.3 0.13 4.5E-06 50.2 2.8 37 397-433 31-73 (249)
303 4dgk_A Phytoene dehydrogenase; 88.7 0.65 2.2E-05 48.6 6.9 73 74-157 227-301 (501)
304 2oyr_A UPF0341 protein YHIQ; a 88.3 0.31 1.1E-05 48.0 3.9 38 399-437 90-133 (258)
305 1yub_A Ermam, rRNA methyltrans 88.3 0.034 1.2E-06 53.6 -3.0 37 398-435 30-72 (245)
306 2zig_A TTHA0409, putative modi 88.0 0.52 1.8E-05 46.8 5.3 40 397-437 235-280 (297)
307 2e1m_C L-glutamate oxidase; L- 87.3 0.26 8.9E-06 45.8 2.5 31 237-267 117-149 (181)
308 2qy6_A UPF0209 protein YFCK; s 86.6 0.36 1.2E-05 47.5 3.2 20 451-470 192-211 (257)
309 4fzv_A Putative methyltransfer 86.4 0.8 2.7E-05 47.3 5.8 40 400-439 151-197 (359)
310 2k4m_A TR8_protein, UPF0146 pr 85.2 0.39 1.3E-05 43.9 2.4 30 399-428 37-73 (153)
311 3v97_A Ribosomal RNA large sub 84.8 1.1 3.7E-05 50.3 6.3 27 415-441 257-283 (703)
312 2ar0_A M.ecoki, type I restric 83.7 1.1 3.6E-05 48.7 5.5 58 415-472 212-312 (541)
313 3ip1_A Alcohol dehydrogenase, 83.4 1.5 5E-05 45.3 6.2 36 398-433 214-257 (404)
314 1qyr_A KSGA, high level kasuga 83.0 0.51 1.7E-05 46.1 2.4 36 397-435 21-64 (252)
315 3s2e_A Zinc-containing alcohol 81.7 0.56 1.9E-05 47.0 2.2 71 398-471 167-262 (340)
316 1f8f_A Benzyl alcohol dehydrog 81.6 0.59 2E-05 47.5 2.3 72 398-472 191-289 (371)
317 3ua3_A Protein arginine N-meth 81.1 1.7 5.9E-05 48.8 6.0 70 400-470 412-532 (745)
318 1g60_A Adenine-specific methyl 80.6 1.5 5.2E-05 42.5 4.8 42 398-439 213-259 (260)
319 1pqw_A Polyketide synthase; ro 80.1 1.4 4.9E-05 40.1 4.2 66 398-471 39-136 (198)
320 3khk_A Type I restriction-modi 80.0 1.5 5E-05 47.7 4.9 27 414-440 283-309 (544)
321 3fbg_A Putative arginate lyase 78.5 1.4 4.6E-05 44.4 3.8 73 398-470 151-246 (346)
322 3nx4_A Putative oxidoreductase 77.8 0.76 2.6E-05 45.6 1.6 62 406-471 163-240 (324)
323 3m6i_A L-arabinitol 4-dehydrog 76.1 1.6 5.5E-05 44.0 3.6 71 398-472 180-283 (363)
324 3jyn_A Quinone oxidoreductase; 76.1 1.2 4.2E-05 44.3 2.6 71 398-472 141-239 (325)
325 3two_A Mannitol dehydrogenase; 75.5 0.92 3.2E-05 45.6 1.6 73 397-472 176-265 (348)
326 1pl8_A Human sorbitol dehydrog 75.3 2 6.7E-05 43.4 4.0 71 398-471 172-272 (356)
327 3qwb_A Probable quinone oxidor 75.0 1.2 4.1E-05 44.4 2.3 71 398-472 149-247 (334)
328 3uog_A Alcohol dehydrogenase; 74.7 0.93 3.2E-05 46.0 1.3 72 398-473 190-288 (363)
329 4dup_A Quinone oxidoreductase; 74.7 1.7 5.9E-05 43.8 3.4 71 398-472 168-265 (353)
330 3fpc_A NADP-dependent alcohol 74.7 1.2 4.1E-05 44.9 2.1 73 397-472 166-266 (352)
331 3pi7_A NADH oxidoreductase; gr 74.7 1.9 6.7E-05 43.2 3.7 63 406-472 181-263 (349)
332 4dvj_A Putative zinc-dependent 74.3 2.9 9.8E-05 42.5 4.9 65 400-471 174-269 (363)
333 2d8a_A PH0655, probable L-thre 73.9 1.5 5.2E-05 44.0 2.7 73 397-472 167-267 (348)
334 3gms_A Putative NADPH:quinone 73.8 1.2 4E-05 44.7 1.8 36 398-433 145-188 (340)
335 3s1s_A Restriction endonucleas 72.5 3.2 0.00011 47.5 5.0 35 399-433 323-367 (878)
336 3evf_A RNA-directed RNA polyme 72.2 0.92 3.2E-05 45.3 0.6 75 399-473 76-185 (277)
337 4b7c_A Probable oxidoreductase 72.0 2.5 8.6E-05 42.0 3.8 67 398-471 150-247 (336)
338 2dq4_A L-threonine 3-dehydroge 71.9 0.87 3E-05 45.7 0.3 71 397-471 164-261 (343)
339 1uuf_A YAHK, zinc-type alcohol 71.1 1.4 4.7E-05 45.0 1.6 71 398-471 195-287 (369)
340 3jv7_A ADH-A; dehydrogenase, n 70.8 2.1 7.2E-05 42.8 2.9 72 398-472 172-270 (345)
341 1cdo_A Alcohol dehydrogenase; 70.6 2.7 9.3E-05 42.6 3.7 71 398-471 193-293 (374)
342 1e3i_A Alcohol dehydrogenase, 69.6 2.9 0.0001 42.3 3.7 72 398-472 196-297 (376)
343 1rjw_A ADH-HT, alcohol dehydro 68.9 2.4 8.2E-05 42.4 2.8 67 398-471 165-260 (339)
344 2c0c_A Zinc binding alcohol de 68.5 2.9 0.0001 42.3 3.4 67 398-472 164-261 (362)
345 4ej6_A Putative zinc-binding d 68.3 2.7 9.2E-05 42.8 3.1 72 398-472 183-284 (370)
346 1qor_A Quinone oxidoreductase; 67.8 2.3 7.7E-05 42.2 2.3 71 398-472 141-239 (327)
347 2fzw_A Alcohol dehydrogenase c 66.5 3.6 0.00012 41.5 3.6 71 398-471 191-291 (373)
348 1p0f_A NADP-dependent alcohol 66.4 3.4 0.00012 41.8 3.4 71 398-471 192-292 (373)
349 3gaz_A Alcohol dehydrogenase s 66.3 3.4 0.00012 41.4 3.3 67 398-470 151-244 (343)
350 4eye_A Probable oxidoreductase 65.6 2.6 8.8E-05 42.3 2.3 71 398-472 160-257 (342)
351 3uko_A Alcohol dehydrogenase c 65.3 2.7 9.1E-05 42.8 2.3 69 398-473 194-296 (378)
352 2jhf_A Alcohol dehydrogenase E 64.1 4.1 0.00014 41.2 3.5 71 398-471 192-292 (374)
353 1wly_A CAAR, 2-haloacrylate re 63.7 3.5 0.00012 41.0 2.8 70 399-472 147-244 (333)
354 2j8z_A Quinone oxidoreductase; 63.4 4 0.00014 41.1 3.2 71 398-472 163-261 (354)
355 2j3h_A NADP-dependent oxidored 61.7 3.8 0.00013 40.8 2.7 66 399-471 157-254 (345)
356 3lkd_A Type I restriction-modi 60.9 18 0.00062 39.1 8.0 40 400-439 224-273 (542)
357 3klj_A NAD(FAD)-dependent dehy 60.7 11 0.00037 38.5 6.0 38 236-273 256-298 (385)
358 2eih_A Alcohol dehydrogenase; 60.6 2.9 9.9E-05 41.8 1.6 70 398-471 167-264 (343)
359 1wg8_A Predicted S-adenosylmet 59.7 8.4 0.00029 38.5 4.7 34 398-432 23-62 (285)
360 4dgk_A Phytoene dehydrogenase; 59.3 3 0.0001 43.5 1.4 31 237-267 457-488 (501)
361 1yb5_A Quinone oxidoreductase; 59.0 4.1 0.00014 41.0 2.4 66 398-471 171-268 (351)
362 1v3u_A Leukotriene B4 12- hydr 58.9 5.5 0.00019 39.4 3.3 69 399-471 147-243 (333)
363 3gcz_A Polyprotein; flavivirus 58.0 1.3 4.3E-05 44.4 -1.6 77 398-474 91-203 (282)
364 4eez_A Alcohol dehydrogenase 1 56.5 5.5 0.00019 39.6 2.8 75 398-472 164-263 (348)
365 4a2c_A Galactitol-1-phosphate 56.5 5.6 0.00019 39.5 2.8 70 398-474 161-262 (346)
366 3krt_A Crotonyl COA reductase; 55.4 13 0.00045 38.7 5.6 36 398-433 229-272 (456)
367 4a0s_A Octenoyl-COA reductase/ 55.4 26 0.0009 36.1 7.9 35 398-432 221-263 (447)
368 2zb4_A Prostaglandin reductase 53.8 20 0.00068 35.8 6.4 66 399-471 162-259 (357)
369 3gqv_A Enoyl reductase; medium 52.6 11 0.00036 38.2 4.2 65 398-470 165-261 (371)
370 4e12_A Diketoreductase; oxidor 51.6 32 0.0011 33.3 7.4 64 406-470 20-119 (283)
371 2uyo_A Hypothetical protein ML 50.0 36 0.0012 33.9 7.6 117 400-519 105-274 (310)
372 3dje_A Fructosyl amine: oxygen 49.5 25 0.00084 35.7 6.4 48 76-135 169-220 (438)
373 3eld_A Methyltransferase; flav 46.4 5.2 0.00018 40.3 0.7 76 399-474 83-193 (300)
374 3tqh_A Quinone oxidoreductase; 46.0 11 0.00038 37.1 3.0 64 398-470 153-243 (321)
375 3f8d_A Thioredoxin reductase ( 45.2 28 0.00095 33.1 5.7 48 75-135 77-124 (323)
376 4a9w_A Monooxygenase; baeyer-v 44.2 27 0.00091 33.7 5.5 47 75-134 83-130 (357)
377 2dph_A Formaldehyde dismutase; 42.4 14 0.00049 37.6 3.3 75 397-471 185-298 (398)
378 1f0y_A HCDH, L-3-hydroxyacyl-C 42.0 53 0.0018 31.9 7.3 34 400-434 17-58 (302)
379 2h6e_A ADH-4, D-arabinose 1-de 41.3 22 0.00076 35.3 4.5 72 397-471 170-268 (344)
380 2ywl_A Thioredoxin reductase r 40.9 31 0.0011 30.2 5.0 23 112-135 87-109 (180)
381 3fg2_P Putative rubredoxin red 40.7 28 0.00095 35.3 5.1 48 72-134 61-108 (404)
382 1xhc_A NADH oxidase /nitrite r 40.1 25 0.00087 35.3 4.7 36 237-272 260-300 (367)
383 3nyc_A D-arginine dehydrogenas 40.0 23 0.0008 34.7 4.4 56 74-142 160-217 (381)
384 1boo_A Protein (N-4 cytosine-s 39.5 22 0.00076 35.4 4.1 41 399-439 254-299 (323)
385 2vn8_A Reticulon-4-interacting 39.2 18 0.00061 36.5 3.4 66 398-470 184-278 (375)
386 3dme_A Conserved exported prot 39.0 39 0.0013 32.7 5.8 57 74-141 156-216 (369)
387 3ps9_A TRNA 5-methylaminomethy 38.8 39 0.0013 36.9 6.3 50 74-135 423-472 (676)
388 3d1c_A Flavin-containing putat 38.5 38 0.0013 33.1 5.6 48 75-135 95-142 (369)
389 3ef6_A Toluene 1,2-dioxygenase 37.7 31 0.001 35.1 4.9 46 75-134 64-109 (410)
390 3fwz_A Inner membrane protein 37.7 61 0.0021 27.6 6.2 32 400-432 9-48 (140)
391 4auk_A Ribosomal RNA large sub 37.7 15 0.00052 38.1 2.6 25 399-424 213-243 (375)
392 3ayj_A Pro-enzyme of L-phenyla 37.6 15 0.00051 41.3 2.7 32 235-266 642-675 (721)
393 3ado_A Lambda-crystallin; L-gu 37.5 80 0.0027 31.7 7.9 89 406-495 22-147 (319)
394 3pvc_A TRNA 5-methylaminomethy 37.2 42 0.0014 36.8 6.3 50 74-135 418-468 (689)
395 1fl2_A Alkyl hydroperoxide red 37.1 41 0.0014 32.0 5.5 51 75-134 63-113 (310)
396 1kol_A Formaldehyde dehydrogen 36.6 26 0.00088 35.6 4.1 73 398-471 186-299 (398)
397 1zsy_A Mitochondrial 2-enoyl t 35.1 53 0.0018 32.6 6.2 66 398-471 168-269 (357)
398 1y56_B Sarcosine oxidase; dehy 35.0 54 0.0019 32.2 6.2 56 74-142 155-213 (382)
399 2yqu_A 2-oxoglutarate dehydrog 34.5 53 0.0018 33.7 6.2 49 74-134 214-262 (455)
400 1e3j_A NADP(H)-dependent ketos 34.5 30 0.001 34.4 4.1 71 398-471 169-270 (352)
401 3v76_A Flavoprotein; structura 34.4 45 0.0015 34.4 5.6 23 112-135 164-186 (417)
402 3lxd_A FAD-dependent pyridine 33.8 34 0.0012 34.7 4.5 47 73-133 70-116 (415)
403 1mo9_A ORF3; nucleotide bindin 33.7 50 0.0017 34.8 6.0 52 74-133 261-313 (523)
404 4fn4_A Short chain dehydrogena 33.7 42 0.0014 32.5 4.9 33 406-439 24-56 (254)
405 3iwa_A FAD-dependent pyridine 33.1 59 0.002 33.5 6.3 47 76-134 210-256 (472)
406 2v3a_A Rubredoxin reductase; a 32.3 60 0.002 32.4 6.0 48 75-134 194-241 (384)
407 2q0l_A TRXR, thioredoxin reduc 32.1 52 0.0018 31.2 5.3 47 75-134 66-112 (311)
408 1piw_A Hypothetical zinc-type 32.1 23 0.00078 35.5 2.8 73 398-471 180-275 (360)
409 3lxd_A FAD-dependent pyridine 31.9 77 0.0026 32.0 6.8 48 76-134 202-249 (415)
410 2uzz_A N-methyl-L-tryptophan o 31.8 56 0.0019 32.0 5.6 55 74-142 155-209 (372)
411 2zbw_A Thioredoxin reductase; 31.4 55 0.0019 31.5 5.4 23 112-134 97-119 (335)
412 3o0h_A Glutathione reductase; 31.4 66 0.0023 33.4 6.4 48 75-134 239-286 (484)
413 4dry_A 3-oxoacyl-[acyl-carrier 31.1 51 0.0017 31.7 5.0 56 380-436 15-79 (281)
414 3goh_A Alcohol dehydrogenase, 31.0 22 0.00075 34.8 2.4 69 398-471 143-228 (315)
415 1y0p_A Fumarate reductase flav 30.7 75 0.0026 33.8 6.8 52 75-134 262-315 (571)
416 1eg2_A Modification methylase 30.4 37 0.0013 33.9 4.0 41 399-439 244-292 (319)
417 3lzw_A Ferredoxin--NADP reduct 30.0 34 0.0012 32.6 3.6 47 76-134 75-121 (332)
418 2vz8_A Fatty acid synthase; tr 29.5 50 0.0017 42.3 5.8 69 398-470 1668-1768(2512)
419 3ef6_A Toluene 1,2-dioxygenase 29.3 71 0.0024 32.3 6.0 47 76-134 193-239 (410)
420 3ggo_A Prephenate dehydrogenas 29.2 1.3E+02 0.0043 29.8 7.7 65 400-469 35-125 (314)
421 2gf3_A MSOX, monomeric sarcosi 28.8 62 0.0021 31.8 5.4 49 74-135 156-204 (389)
422 1xdi_A RV3303C-LPDA; reductase 28.8 71 0.0024 33.3 6.1 47 76-134 231-277 (499)
423 2oln_A NIKD protein; flavoprot 28.7 94 0.0032 30.8 6.8 55 75-142 160-216 (397)
424 4g81_D Putative hexonate dehyd 28.5 50 0.0017 32.0 4.5 32 406-438 26-57 (255)
425 1vj0_A Alcohol dehydrogenase, 28.3 42 0.0014 33.8 4.1 72 398-472 196-298 (380)
426 1d5t_A Guanine nucleotide diss 28.1 51 0.0018 33.8 4.8 35 237-272 397-432 (433)
427 4ap3_A Steroid monooxygenase; 28.0 71 0.0024 34.2 6.0 48 77-134 108-157 (549)
428 3gwf_A Cyclohexanone monooxyge 27.9 75 0.0026 33.9 6.1 49 76-134 95-145 (540)
429 3fg2_P Putative rubredoxin red 27.4 89 0.003 31.4 6.3 47 77-134 193-239 (404)
430 3iup_A Putative NADPH:quinone 27.2 34 0.0012 34.5 3.2 27 406-432 188-214 (379)
431 2dpo_A L-gulonate 3-dehydrogen 27.2 1.5E+02 0.0052 29.4 7.9 65 406-471 22-122 (319)
432 1zcj_A Peroxisomal bifunctiona 27.1 1.3E+02 0.0043 31.6 7.6 70 400-470 39-148 (463)
433 1h2b_A Alcohol dehydrogenase; 26.9 43 0.0015 33.4 3.8 35 398-432 187-229 (359)
434 3mog_A Probable 3-hydroxybutyr 26.7 94 0.0032 32.9 6.6 70 406-476 21-124 (483)
435 3ab1_A Ferredoxin--NADP reduct 26.4 67 0.0023 31.4 5.1 23 112-134 107-129 (360)
436 2gv8_A Monooxygenase; FMO, FAD 26.0 60 0.0021 33.2 4.8 23 112-134 147-175 (447)
437 2gqf_A Hypothetical protein HI 25.5 89 0.003 31.8 5.9 52 74-134 115-166 (401)
438 1iz0_A Quinone oxidoreductase; 25.2 39 0.0013 32.7 3.0 65 399-471 127-217 (302)
439 2r9z_A Glutathione amide reduc 25.1 93 0.0032 32.1 6.1 48 74-133 213-261 (463)
440 1qo8_A Flavocytochrome C3 fuma 24.5 98 0.0034 32.9 6.3 51 76-135 258-311 (566)
441 1ges_A Glutathione reductase; 24.4 94 0.0032 31.9 5.9 48 75-133 215-262 (450)
442 1d4d_A Flavocytochrome C fumar 24.2 1.1E+02 0.0037 32.8 6.5 51 75-134 262-315 (572)
443 3itj_A Thioredoxin reductase 1 24.1 94 0.0032 29.6 5.5 47 75-134 91-140 (338)
444 2xve_A Flavin-containing monoo 24.1 80 0.0027 32.7 5.4 49 75-133 108-163 (464)
445 1q1r_A Putidaredoxin reductase 24.0 73 0.0025 32.6 5.0 46 75-134 67-112 (431)
446 1xa0_A Putative NADPH dependen 23.8 36 0.0012 33.4 2.5 68 400-471 152-245 (328)
447 2cdc_A Glucose dehydrogenase g 23.8 56 0.0019 32.6 4.0 72 398-472 181-278 (366)
448 3c24_A Putative oxidoreductase 23.8 1.9E+02 0.0065 27.5 7.7 59 406-469 28-98 (286)
449 3ojo_A CAP5O; rossmann fold, c 23.7 1.2E+02 0.0042 31.6 6.7 32 400-432 15-52 (431)
450 2i0z_A NAD(FAD)-utilizing dehy 23.6 1E+02 0.0035 31.6 6.0 23 113-135 168-190 (447)
451 1rjd_A PPM1P, carboxy methyl t 23.4 2.1E+02 0.0072 28.6 8.2 114 399-517 99-281 (334)
452 2b5w_A Glucose dehydrogenase; 23.3 46 0.0016 33.2 3.2 71 399-472 174-273 (357)
453 2wpf_A Trypanothione reductase 23.0 1.1E+02 0.0036 32.1 6.1 48 75-133 242-289 (495)
454 3ayj_A Pro-enzyme of L-phenyla 22.9 1.1E+02 0.0038 34.3 6.5 28 112-139 387-417 (721)
455 1ryi_A Glycine oxidase; flavop 22.9 60 0.0021 31.8 4.0 48 75-135 171-218 (382)
456 2y0c_A BCEC, UDP-glucose dehyd 22.8 1.1E+02 0.0036 32.4 6.1 66 406-472 24-128 (478)
457 1fec_A Trypanothione reductase 22.5 99 0.0034 32.2 5.7 48 75-133 238-285 (490)
458 2hcy_A Alcohol dehydrogenase 1 22.3 60 0.002 32.1 3.8 71 398-471 170-268 (347)
459 3r9u_A Thioredoxin reductase; 22.2 77 0.0026 29.8 4.4 50 77-135 192-243 (315)
460 3vyw_A MNMC2; tRNA wobble urid 22.2 61 0.0021 32.6 3.8 19 452-470 206-224 (308)
461 2ew2_A 2-dehydropantoate 2-red 21.9 1.7E+02 0.0059 27.7 7.0 64 406-470 19-106 (316)
462 1ebd_A E3BD, dihydrolipoamide 21.8 86 0.0029 32.1 5.0 45 75-134 98-143 (455)
463 3hyw_A Sulfide-quinone reducta 21.8 47 0.0016 34.0 3.0 21 114-134 87-107 (430)
464 1jvb_A NAD(H)-dependent alcoho 21.5 63 0.0022 31.9 3.8 71 398-471 171-270 (347)
465 1m6i_A Programmed cell death p 21.5 1.1E+02 0.0037 32.0 5.8 45 78-134 236-280 (493)
466 2py6_A Methyltransferase FKBM; 21.3 1.1E+02 0.0038 31.4 5.7 38 399-436 228-274 (409)
467 4fs3_A Enoyl-[acyl-carrier-pro 21.2 68 0.0023 30.3 3.8 32 406-438 25-56 (256)
468 3uox_A Otemo; baeyer-villiger 21.2 93 0.0032 33.2 5.3 23 112-134 123-145 (545)
469 3gg2_A Sugar dehydrogenase, UD 21.0 1E+02 0.0035 32.3 5.4 69 406-476 18-125 (450)
470 3h8l_A NADH oxidase; membrane 20.9 1.2E+02 0.004 30.4 5.8 44 74-133 224-267 (409)
471 2bcg_G Secretory pathway GDP d 20.7 65 0.0022 33.2 3.8 38 237-274 408-445 (453)
472 2daf_A FLJ35834 protein; hypot 20.7 39 0.0013 29.3 1.8 48 10-59 68-116 (118)
473 2vz8_A Fatty acid synthase; tr 20.4 18 0.0006 46.4 -0.8 75 400-474 1243-1350(2512)
474 2f1k_A Prephenate dehydrogenas 20.4 2E+02 0.007 27.0 7.1 61 406-472 16-90 (279)
475 2zig_A TTHA0409, putative modi 20.1 41 0.0014 32.9 2.0 22 450-471 75-96 (297)
476 3nlc_A Uncharacterized protein 20.0 1.3E+02 0.0044 32.4 6.0 49 76-135 228-276 (549)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.90 E-value=2.6e-23 Score=208.93 Aligned_cols=161 Identities=34% Similarity=0.483 Sum_probs=138.2
Q ss_pred CchhHHHHhhhcccccchHHHHhccccccchhccccCCC-------------------------eehhhc------HHHH
Q 043102 361 NTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVR-------------------------EVIFLG------TIEV 409 (525)
Q Consensus 361 N~~~~s~~nIa~hYDl~nd~y~l~Ld~~m~ys~a~f~~~-------------------------rVLDIG------a~~l 409 (525)
..++..+++|++|||++|+||++|+|++|.|+|++|..+ +||||| ++.+
T Consensus 11 ~~~~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l 90 (302)
T 3hem_A 11 TQLKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHA 90 (302)
T ss_dssp -CCCCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHH
T ss_pred ccccchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHH
Confidence 345677899999999999999999999999999999742 899999 7888
Q ss_pred HHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------cc-------CcccHHHHHHHHH
Q 043102 410 VKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SF-------GHEYMEEFFGCCE 459 (525)
Q Consensus 410 A~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~v-------g~~~~~~~f~~i~ 459 (525)
++++|++|+|||+|++|++.|+++++..|+.++ |. |+ |.+++..+++++.
T Consensus 91 a~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~ 170 (302)
T 3hem_A 91 VAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFY 170 (302)
T ss_dssp HHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHH
T ss_pred HHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhcCccccccchhHHHHHHHHHH
Confidence 887789999999999999999999999887654 33 55 6678899999999
Q ss_pred hccCCCcEEEEEEecCCCcchhcccCc---------hhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 460 SLIAKDGLFVLQFISIPDERYNEFRLS---------SDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 460 r~LkpGG~~viq~i~~~~~~~~~~~~~---------~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
++|||||++++++++.++......... .+|+.+|+|||+.+|+++++.+.++++ ||++.-..
T Consensus 171 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~a-Gf~~~~~~ 241 (302)
T 3hem_A 171 NLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNA-GWKVERYH 241 (302)
T ss_dssp HSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHH-TCEEEEEE
T ss_pred HhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhC-CcEEEEEE
Confidence 999999999999999876543322222 389999999999999999999999996 99987654
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.87 E-value=3.8e-22 Score=198.23 Aligned_cols=160 Identities=31% Similarity=0.522 Sum_probs=135.8
Q ss_pred chhHHHHhhhcccccchHHHHhccccccchhccccCCC-------------------------eehhhc------HHHHH
Q 043102 362 TLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVR-------------------------EVIFLG------TIEVV 410 (525)
Q Consensus 362 ~~~~s~~nIa~hYDl~nd~y~l~Ld~~m~ys~a~f~~~-------------------------rVLDIG------a~~lA 410 (525)
+.++++++|++|||++|+||+.|+|+.|.|+|++|+.+ +||||| ++.++
T Consensus 4 ~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~ 83 (287)
T 1kpg_A 4 ELKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAV 83 (287)
T ss_dssp CSCCCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHH
T ss_pred cccccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHH
Confidence 45678899999999999999999999999999999632 999999 77888
Q ss_pred HhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccCcccHHHHHHHHHhccCCCcE
Q 043102 411 KRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFGHEYMEEFFGCCESLIAKDGL 467 (525)
Q Consensus 411 ~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg~~~~~~~f~~i~r~LkpGG~ 467 (525)
+++|++|+|||+|++|++.|++++++.|+.++ |. |++.+++..+++++.++|||||+
T Consensus 84 ~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 84 EKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp HHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCE
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCE
Confidence 76799999999999999999999988776543 33 55667899999999999999999
Q ss_pred EEEEEecCCCcchh---------cccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 468 FVLQFISIPDERYN---------EFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 468 ~viq~i~~~~~~~~---------~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++++++..+.... ......+|+.+|+||++.+|+++++.+.++++ ||+++-..
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a-Gf~~~~~~ 226 (287)
T 1kpg_A 164 MLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASAN-GFTVTRVQ 226 (287)
T ss_dssp EEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTT-TCEEEEEE
T ss_pred EEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhC-CcEEEEEE
Confidence 99999887654321 11234678999999999999999999999995 99987654
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.86 E-value=1.7e-21 Score=196.81 Aligned_cols=161 Identities=29% Similarity=0.435 Sum_probs=128.0
Q ss_pred ccCchhHHHHhhhcccccchHHHHhccccccchhccccCCC-------------------------eehhhc------HH
Q 043102 359 RTNTLTQACRHISRHYDLSNELFCLFLDESLTYSCALFKVR-------------------------EVIFLG------TI 407 (525)
Q Consensus 359 ~~N~~~~s~~nIa~hYDl~nd~y~l~Ld~~m~ys~a~f~~~-------------------------rVLDIG------a~ 407 (525)
+.|+...++++|++|||++++||+.|+|+.+.|++++|+.+ +||||| +.
T Consensus 27 ~~~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~ 106 (318)
T 2fk8_A 27 SPTKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMR 106 (318)
T ss_dssp -----------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHH
T ss_pred ccCChhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHH
Confidence 88999999999999999999999999999999999998632 999999 77
Q ss_pred HHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccCcccHHHHHHHHHhccCC
Q 043102 408 EVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFGHEYMEEFFGCCESLIAK 464 (525)
Q Consensus 408 ~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg~~~~~~~f~~i~r~Lkp 464 (525)
.+++++|++|+|||+|++|++.|++++++.|+.++ |. |++.++...+++++.++|||
T Consensus 107 ~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 186 (318)
T 2fk8_A 107 RAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA 186 (318)
T ss_dssp HHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT
T ss_pred HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC
Confidence 88876799999999999999999999998887643 33 45667899999999999999
Q ss_pred CcEEEEEEecCCCcchhcc---------cCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 465 DGLFVLQFISIPDERYNEF---------RLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 465 GG~~viq~i~~~~~~~~~~---------~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
||+++++++...+...... ....+|+.+|+||++.+|+.+++.+.++++ ||+++-
T Consensus 187 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a-Gf~~~~ 250 (318)
T 2fk8_A 187 DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKA-GFTVPE 250 (318)
T ss_dssp TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHT-TCBCCC
T ss_pred CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhC-CCEEEE
Confidence 9999999998776432111 123488999999999999999999999995 998754
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=1.4e-15 Score=149.18 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=101.5
Q ss_pred HHHHhhhcccccchHHHHhccccccchhccccCCC---------------------------eehhhc------HHHHHH
Q 043102 365 QACRHISRHYDLSNELFCLFLDESLTYSCALFKVR---------------------------EVIFLG------TIEVVK 411 (525)
Q Consensus 365 ~s~~nIa~hYDl~nd~y~l~Ld~~m~ys~a~f~~~---------------------------rVLDIG------a~~lA~ 411 (525)
.+.+++++|||..+++|..++++.++ ++||++. +||||| +..+++
T Consensus 4 p~~~~~~~~Yd~~~~~y~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 81 (273)
T 3bus_A 4 PTPEEVRQMYDDFTDPFARIWGENLH--FGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLAT 81 (273)
T ss_dssp -------------------CCGGGCC--CCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHH
T ss_pred CcHHHHHHHHcchHHHHHHHcCCCce--EEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHH
Confidence 45778999999999999999999764 5777431 999999 778888
Q ss_pred hcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----c-c-CcccHHHHHHHHHhccCCCcE
Q 043102 412 RTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR----S-F-GHEYMEEFFGCCESLIAKDGL 467 (525)
Q Consensus 412 ~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~-v-g~~~~~~~f~~i~r~LkpGG~ 467 (525)
+.+++|+|+|+|++|++.|+++++..|+.++ |. . + ...+...+++++.++|||||+
T Consensus 82 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 161 (273)
T 3bus_A 82 ARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGT 161 (273)
T ss_dssp HSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEE
T ss_pred hcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeE
Confidence 7799999999999999999999998887644 22 0 1 134678999999999999999
Q ss_pred EEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 468 FVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 468 ~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++.++..............+.+. ..+|+..+++.+++.+.++++ ||+++-..
T Consensus 162 l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 214 (273)
T 3bus_A 162 VAIADFVLLAPVEGAKKEAVDAFR-AGGGVLSLGGIDEYESDVRQA-ELVVTSTV 214 (273)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHH-HHHTCCCCCCHHHHHHHHHHT-TCEEEEEE
T ss_pred EEEEEeeccCCCChhHHHHHHHHH-hhcCccCCCCHHHHHHHHHHc-CCeEEEEE
Confidence 999988765432211111111111 347888999999999999995 99987543
No 5
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.55 E-value=4.7e-15 Score=149.73 Aligned_cols=160 Identities=15% Similarity=0.150 Sum_probs=124.5
Q ss_pred ccCchhHHHHhh-hcccccchHHHHhccccc-cchhccccC----------------------CCeehhhc------HHH
Q 043102 359 RTNTLTQACRHI-SRHYDLSNELFCLFLDES-LTYSCALFK----------------------VREVIFLG------TIE 408 (525)
Q Consensus 359 ~~N~~~~s~~nI-a~hYDl~nd~y~l~Ld~~-m~ys~a~f~----------------------~~rVLDIG------a~~ 408 (525)
+.|.+.++++++ ++|||++++++..+.++. +.|+.++|. ..+||||| +..
T Consensus 55 ~~~~~~g~~~~i~~~~y~~~~~~~~~~~~~~~~~y~~~~f~~~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~ 134 (312)
T 3vc1_A 55 PVNLRLGDVDGLYHHHYGIGPVDRAALGDPEHSEYEKKVIAELHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVM 134 (312)
T ss_dssp HHHHHHHTTTTCCCCSCCCSCCCHHHHCCTTSTTHHHHHHHHHHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHH
T ss_pred cchhhcccccchhhhhcCCchhHHHhhcCCCccccchHHHhhhhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHH
Confidence 346677788898 899999999999999988 888766552 23999999 778
Q ss_pred HHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc-----ccCcccHHHHHHHHHhccCCC
Q 043102 409 VVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR-----SFGHEYMEEFFGCCESLIAKD 465 (525)
Q Consensus 409 lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~-----~vg~~~~~~~f~~i~r~LkpG 465 (525)
++++.|++|+|||+|+++++.|+++++..|+.++ |. .+..-+...+++++.++||||
T Consensus 135 la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg 214 (312)
T 3vc1_A 135 AHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG 214 (312)
T ss_dssp HHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC
Confidence 8876799999999999999999999999887644 22 011124899999999999999
Q ss_pred cEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 466 GLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 466 G~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
|++++.+....+. +........++.++.+|+ +++.+++.+.++++ ||+++-..
T Consensus 215 G~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~s~~~~~~~l~~a-Gf~~~~~~ 267 (312)
T 3vc1_A 215 GRYVTITGCWNPR-YGQPSKWVSQINAHFECN--IHSRREYLRAMADN-RLVPHTIV 267 (312)
T ss_dssp EEEEEEEEEECTT-TCSCCHHHHHHHHHHTCC--CCBHHHHHHHHHTT-TEEEEEEE
T ss_pred cEEEEEEcccccc-ccchhHHHHHHHhhhcCC--CCCHHHHHHHHHHC-CCEEEEEE
Confidence 9999988765542 222233456676666653 89999999999995 99987654
No 6
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.54 E-value=4.6e-15 Score=154.61 Aligned_cols=150 Identities=15% Similarity=0.110 Sum_probs=102.7
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCceeEeccCCCC----------CCCC----CCCccc
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRTGGAFHDIFLHCDKNS----------MPQN----PAAWSA 177 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~~~vlHtD~s~----------mP~~----~~aWas 177 (525)
+|.|.+.+|. ..+|+||+|+++.+++++|. +++.|+++|+.++..-+|++..+ +|++ ...|..
T Consensus 235 ~v~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 311 (424)
T 2b9w_A 235 KVHIHTTDWD-RESDVLVLTVPLEKFLDYSD--ADDDEREYFSKIIHQQYMVDACLVKEYPTISGYVPDNMRPERLGHVM 311 (424)
T ss_dssp CEEEEESSCE-EEESEEEECSCHHHHTTSBC--CCHHHHHHHTTCEEEEEEEEEEEESSCCSSEEECGGGGSGGGTTSCC
T ss_pred EEEEEECCCe-EEcCEEEECCCHHHHhhccC--CCHHHHHHHhcCCcceeEEEEEEeccCCcccccccCCCCCcCCCcce
Confidence 5778888774 78999999999999999985 67888889998881112222222 2432 234556
Q ss_pred cccccCCC-CC---------C---CCCCCCCe--------EEEcCCCCCCcceee--EEEecCCCCCHHHHHH--HHHhh
Q 043102 178 WSFLGSLD-SK---------N---LGETSLPY--------LVTLNPDHAPEHTLL--KWSTGPPVPFVAASKA--SLELG 232 (525)
Q Consensus 178 wNy~~~~~-~~---------n---l~~~~~~~--------fvTLNp~~~p~~il~--~~~y~HPv~~~~a~~a--q~~l~ 232 (525)
||+....+ .. + +...+.+. ++++|+. +.+++. .|. .||.+..+..++ ++++.
T Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~--~~~~~~~~~w~-~~p~~~~~~~~~G~~~~~~ 388 (424)
T 2b9w_A 312 VYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP--VEKIIEEQTWY-YFPHVSSEDYKAGWYEKVE 388 (424)
T ss_dssp EEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC--EEEEEEEEEEE-EEEECCHHHHHTTHHHHHH
T ss_pred EEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc--cccccccccee-eeeccCHHHHhccHHHHHH
Confidence 65543221 11 0 11000011 2344432 223333 454 499999888877 88999
Q ss_pred hhcCCCCeEEeccCCCCCCchhhhchHHHHHhhhc
Q 043102 233 HIQGRRGIWFRGAYQGYGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 233 ~iqG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~ll 267 (525)
.+||.+++||||+|+++||||+|+.||++||+.+|
T Consensus 389 ~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 389 GMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp HTTTGGGEEECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCceEeccccccccHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999884
No 7
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.46 E-value=3.1e-13 Score=134.47 Aligned_cols=155 Identities=16% Similarity=0.129 Sum_probs=115.4
Q ss_pred CchhHHHHhhhcccccc--hHHHH-hccccccchhccccC-------------------------------CCeehhhc-
Q 043102 361 NTLTQACRHISRHYDLS--NELFC-LFLDESLTYSCALFK-------------------------------VREVIFLG- 405 (525)
Q Consensus 361 N~~~~s~~nIa~hYDl~--nd~y~-l~Ld~~m~ys~a~f~-------------------------------~~rVLDIG- 405 (525)
++...++++++.|||.. ++||+ +|.|+.+++ ++|+ ..+|||||
T Consensus 14 ~~~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGc 91 (297)
T 2o57_A 14 ATSKTVKDNAEIYYDDDDSDRFYFHVWGGEDIHV--GLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGA 91 (297)
T ss_dssp --CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCS--CCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETC
T ss_pred hhHHHHHHHHHHHcCCccchhHHHHHhCCCceEE--EecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCC
Confidence 56677889999999997 49996 555666643 4442 23999999
Q ss_pred -----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----cc--CcccHHHHHH
Q 043102 406 -----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR----SF--GHEYMEEFFG 456 (525)
Q Consensus 406 -----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~v--g~~~~~~~f~ 456 (525)
+..+++++|++|+|||+|++|++.|+++++..|+.++ |. .+ ...+...+++
T Consensus 92 G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~ 171 (297)
T 2o57_A 92 GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQ 171 (297)
T ss_dssp TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHH
Confidence 7788877799999999999999999999988777543 22 00 1245789999
Q ss_pred HHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 457 CCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 457 ~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
++.++|||||++++.++...+.... .....+...+.+| .+++..++.+.++++ ||+++-..
T Consensus 172 ~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~l~~a-Gf~~~~~~ 232 (297)
T 2o57_A 172 ECARVLKPRGVMAITDPMKEDGIDK--SSIQPILDRIKLH--DMGSLGLYRSLAKEC-GLVTLRTF 232 (297)
T ss_dssp HHHHHEEEEEEEEEEEEEECTTCCG--GGGHHHHHHHTCS--SCCCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEeccCCCCch--HHHHHHHHHhcCC--CCCCHHHHHHHHHHC-CCeEEEEE
Confidence 9999999999999998876543211 1234566666665 468999999999995 99987654
No 8
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.33 E-value=6.5e-13 Score=137.77 Aligned_cols=127 Identities=9% Similarity=-0.087 Sum_probs=91.2
Q ss_pred EeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc----eeEecc-CCCCCCCCCCCccccccccCCC-C-------CCC
Q 043102 123 EFYNSCVMALHAPDALKILGNQATFDETRTGGAFH----DIFLHC-DKNSMPQNPAAWSAWSFLGSLD-S-------KNL 189 (525)
Q Consensus 123 e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~----~~vlHt-D~s~mP~~~~aWaswNy~~~~~-~-------~nl 189 (525)
+.||+||+|+|+|+++++ .|+.++ .+++|. |.+.||. . +|+|..+.+ . +|+
T Consensus 222 ~~~D~VV~a~p~~~~~~~-----------~l~~l~y~s~~~v~~~~d~~~~~~--~---~~~~~~~~~~~~~ri~~~~~~ 285 (367)
T 1i8t_A 222 SKAHRIIYTGPIDQYFDY-----------RFGALEYRSLKFETERHEFPNFQG--N---AVINFTDANVPYTRIIEHKHF 285 (367)
T ss_dssp TTEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSSS--S---SEEEECCTTSSCSEEEEGGGG
T ss_pred ccCCEEEEeccHHHHHHH-----------hhCCCCCceEEEEEEEeccccCCC--C---eEEEeCCCCCceeeEEeeccc
Confidence 359999999999998765 477888 667675 9888884 2 444443221 1 022
Q ss_pred C-CCCCCeEEEcCCCCCCcceeeEEEecCCCCCHHHHHHHHHhhh-hcCCCCeEEeccC--CCCCCchhhhchHHHHHhh
Q 043102 190 G-ETSLPYLVTLNPDHAPEHTLLKWSTGPPVPFVAASKASLELGH-IQGRRGIWFRGAY--QGYGFHEDGLKDLSINSCM 265 (525)
Q Consensus 190 ~-~~~~~~fvTLNp~~~p~~il~~~~y~HPv~~~~a~~aq~~l~~-iqG~~~~~fcGay--~g~GfHEdg~~Sgl~aA~~ 265 (525)
. ......+||+|......+ +..+.||+++.+..++|+++.+ +|+.++|||||+| ++|++||||+.||+++|+.
T Consensus 286 ~~~~~~~~~v~~e~~~~~~~---~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~y~~~~d~i~sa~~~a~~ 362 (367)
T 1i8t_A 286 DYVETKHTVVTKEYPLEWKV---GDEPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYKYYDMHQVISAALYQVKN 362 (367)
T ss_dssp SCCCCSCEEEEEEEEEECCT---TSCCCEECCSHHHHHHHHHHHHHHHHCTTEEECSTTTTTSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEEecccCC---CCeeecccCChhHHHHHHHHHHHHhcCCCEEEcccceeeEecCHHHHHHHHHHHHHH
Confidence 1 111235555554321111 2346799999999999999987 7999999999998 8899999999999999999
Q ss_pred hcC
Q 043102 266 TYG 268 (525)
Q Consensus 266 llG 268 (525)
++.
T Consensus 363 ~~~ 365 (367)
T 1i8t_A 363 IMS 365 (367)
T ss_dssp HHS
T ss_pred Hhc
Confidence 854
No 9
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.25 E-value=3.2e-12 Score=127.71 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=82.2
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC-------CC--------C-Cc--------cc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL-------ER--------N-DR--------SF 446 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl-------~d--------~-D~--------~v 446 (525)
+..+||||| ++.+|++ |++|+|||+|++|++.|+++++...+ .. . |. |+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 345999999 7888875 99999999999999999999754311 11 1 44 34
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCC-----------------------CcchhcccCchhHHhhcccCCCCCCCH
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIP-----------------------DERYNEFRLSSDFMKEYIFPGGCLPSL 503 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~-----------------------~~~~~~~~~~~~fi~kYIFPGg~LPsl 503 (525)
..++...+++++.++| |||+++++..... .+....+....+||+|||||||.||++
T Consensus 124 ~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~p~g~~~~~ 202 (261)
T 3iv6_A 124 TTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAGDVLDRALVPHGLIDKP 202 (261)
T ss_dssp CHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTTHHHHHHCCCCTTCCHH
T ss_pred CHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhhhHHHhccCCCCcccHH
Confidence 5567888999999999 9999999754311 011112345689999999999999998
Q ss_pred HHHH
Q 043102 504 SRIT 507 (525)
Q Consensus 504 ~~i~ 507 (525)
+.+-
T Consensus 203 ~~~~ 206 (261)
T 3iv6_A 203 TLLE 206 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 10
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.25 E-value=2.9e-12 Score=133.83 Aligned_cols=137 Identities=9% Similarity=-0.077 Sum_probs=91.4
Q ss_pred cEEEEeCCCce----EeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc----eeEecc-CCCCCCCCCCCcccc-ccc
Q 043102 112 SCTVVCGDGSR----EFYNSCVMALHAPDALKILGNQATFDETRTGGAFH----DIFLHC-DKNSMPQNPAAWSAW-SFL 181 (525)
Q Consensus 112 gv~v~~~~g~~----e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~----~~vlHt-D~s~mP~~~~aWasw-Ny~ 181 (525)
|+.|.+...-. ..||+||+|+|+|+++++ +|++++ .++.|. |+++++ ++| ||.
T Consensus 210 g~~I~l~~~V~~~i~~~~d~VI~a~p~~~~~~~-----------~lg~l~y~s~~~v~~~~d~~~~~------~~~~n~~ 272 (384)
T 2bi7_A 210 NIKVDLQREFIVEERTHYDHVFYSGPLDAFYGY-----------QYGRLGYRTLDFKKFTYQGDYQG------CAVMNYC 272 (384)
T ss_dssp TEEEEESCCCCGGGGGGSSEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEEESCSSS------SSEEEEC
T ss_pred CCEEEECCeeehhhhccCCEEEEcCCHHHHHHh-----------hcCCCCcceEEEEEEEeCCCCCC------CEEEEec
Confidence 45666543211 239999999999999987 477888 444444 754432 556 886
Q ss_pred cCCCC-C------CCC-CC-CCCeEEEcCCCCCCcceeeEEEecCCCCCHHHHHHHHHhhhhcCC-CCeEEeccC--CCC
Q 043102 182 GSLDS-K------NLG-ET-SLPYLVTLNPDHAPEHTLLKWSTGPPVPFVAASKASLELGHIQGR-RGIWFRGAY--QGY 249 (525)
Q Consensus 182 ~~~~~-~------nl~-~~-~~~~fvTLNp~~~p~~il~~~~y~HPv~~~~a~~aq~~l~~iqG~-~~~~fcGay--~g~ 249 (525)
..... . |+. .. ....+|++++....++ ...+.||+++....++++++.+++++ ++|||||+| ++|
T Consensus 273 ~~~~~~~ri~~~~~~~~~~~~~~~~v~~e~~~~~~~---~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~ 349 (384)
T 2bi7_A 273 SVDVPYTRITEHKYFSPWEQHDGSVCYKEYSRACEE---NDIPYYPIRQMGEMALLEKYLSLAENETNITFVGRLGTYRY 349 (384)
T ss_dssp STTSSSSEEEEGGGGCTTSCCSEEEEEEEEEEECCT---TCCCCEECCCHHHHHHHHHHHHHHTTCSSEEECHHHHTTCC
T ss_pred CCCCCeeeEEEeeccCCCCCCCCEEEEEEEeccccC---CCccccccCChhHHHHHHHHHHHHhcCCCEEEccccEEEEe
Confidence 32211 0 110 00 1122344443221110 12256999999999999999999998 899999998 568
Q ss_pred CCchhhhchHHHHHhhhcC
Q 043102 250 GFHEDGLKDLSINSCMTYG 268 (525)
Q Consensus 250 GfHEdg~~Sgl~aA~~llG 268 (525)
++||||+.||+++|+.+++
T Consensus 350 ~~~~d~i~sa~~~a~~~~~ 368 (384)
T 2bi7_A 350 LDMDVTIAEALKTAEVYLN 368 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999853
No 11
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.99 E-value=2.5e-09 Score=103.09 Aligned_cols=114 Identities=16% Similarity=0.156 Sum_probs=88.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc---------CCCCC--Cc--------ccCcccHHH
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA---------DLERN--DR--------SFGHEYMEE 453 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~---------gl~d~--D~--------~vg~~~~~~ 453 (525)
.+||||| +..+++. |++|+|||+|++|++.|++++.-. .+.+. |. |+..+++..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~ 121 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFE 121 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHH
T ss_pred CeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHH
Confidence 5999999 6777775 999999999999999999873110 22222 55 666678899
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCC-CCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGG-CLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg-~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++++.++|||||++++++.... ....+.+.|++|+. ..++..++.+.++++ ||+++-..
T Consensus 122 ~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~~~~~ 182 (240)
T 3dli_A 122 LLSLCYSKMKYSSYIVIESPNPT--------SLYSLINFYIDPTHKKPVHPETLKFILEYL-GFRDVKIE 182 (240)
T ss_dssp HHHHHHHHBCTTCCEEEEEECTT--------SHHHHHHHTTSTTCCSCCCHHHHHHHHHHH-TCEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEeCCcc--------hhHHHHHHhcCccccccCCHHHHHHHHHHC-CCeEEEEE
Confidence 99999999999999999877532 12345666777765 668889999999996 99977543
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.99 E-value=1.2e-09 Score=106.94 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=88.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc-----ccCc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR-----SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~-----~vg~ 448 (525)
..+||||| ++.+++..+++|+|||+|++|++.|+++++..|+.++ |. .+..
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYN 126 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCcee
Confidence 45999999 7788887667999999999999999999998887654 22 1112
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchh-HHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSD-FMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~-fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
-+...+++++.++|||||++++.+++...... ...... |... +| .+++..++.+.++++ ||+++-..
T Consensus 127 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~--~~--~~~~~~~~~~~l~~a-Gf~~v~~~ 194 (267)
T 3kkz_A 127 IGFERGLNEWRKYLKKGGYLAVSECSWFTDER--PAEINDFWMDA--YP--EIDTIPNQVAKIHKA-GYLPVATF 194 (267)
T ss_dssp TCHHHHHHHHGGGEEEEEEEEEEEEEESSSCC--CHHHHHHHHHH--CT--TCEEHHHHHHHHHHT-TEEEEEEE
T ss_pred cCHHHHHHHHHHHcCCCCEEEEEEeeecCCCC--hHHHHHHHHHh--CC--CCCCHHHHHHHHHHC-CCEEEEEE
Confidence 26789999999999999999999886432210 011122 3333 44 678999999999995 99987543
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.98 E-value=6e-10 Score=107.84 Aligned_cols=119 Identities=17% Similarity=0.264 Sum_probs=89.8
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--------CCC-----CC--Cc--------ccCc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--------DLE-----RN--DR--------SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--------gl~-----d~--D~--------~vg~ 448 (525)
..+||||| +..++++.+++|+|||+|+++++.|+++++.. .+. +. |. |++.
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 135 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSL 135 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCH
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcCh
Confidence 34999999 77888766999999999999999999987442 110 11 33 4555
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCC-CCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPG-GCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPG-g~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
++...+++++.++|||||++++.++..+... .....+.+++.+. ..+++..++.+.++++ ||+++-..
T Consensus 136 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~ 204 (266)
T 3ujc_A 136 ENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYADILTAC-NFKNVVSK 204 (266)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHHHHHHHc-CCeEEEEE
Confidence 7899999999999999999999988765421 1233445555553 3578999999999995 99887543
No 14
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.98 E-value=9.9e-10 Score=109.13 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=65.6
Q ss_pred CCeehhhc------HHHHHHh---cCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 398 VREVIFLG------TIEVVKR---TGCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~---~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+.+||||| ++.++++ .|++|+|||+|++|++.|++++++.+...+ |.
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 34999999 6778875 478999999999999999999998876544 21
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
++...++..++++++++|||||++++.+....+
T Consensus 151 ~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 151 FLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred ecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 344566788999999999999999998776654
No 15
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.95 E-value=1.4e-10 Score=117.66 Aligned_cols=111 Identities=10% Similarity=0.078 Sum_probs=79.9
Q ss_pred Ceehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--cc-Cccc
Q 043102 399 REVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR--SF-GHEY 450 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~--~v-g~~~ 450 (525)
.+||||| ++.+|+.. +++|+|+|+|++|++.|++++++.|+.+- |. .. ...+
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~ 156 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDE 156 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSC
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHH
Confidence 3999999 77777753 35799999999999999999988876532 22 00 1111
Q ss_pred HHHHHHHHHhccCCCcEEEEEEecCC--Ccchhcc-cCchhHHhhcccCCCCCCCHHHHHHHHHh
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFISIP--DERYNEF-RLSSDFMKEYIFPGGCLPSLSRITSAMSA 512 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i~~~--~~~~~~~-~~~~~fi~kYIFPGg~LPsl~~i~~~~~~ 512 (525)
+.+.+.++|||||+++++..... +.....+ +...+|+.+||||++++|++..+...+++
T Consensus 157 ---~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~ 218 (317)
T 1dl5_A 157 ---VPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLER 218 (317)
T ss_dssp ---CCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCHHHH
T ss_pred ---HHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEeCCcEEEEEeccEEEEEccCcccccccc
Confidence 12678999999999999976553 2222222 22457999999999999998877655554
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.94 E-value=3.9e-09 Score=102.07 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=88.1
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc-----ccCc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR-----SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~-----~vg~ 448 (525)
..+||||| +..+++..+++|+|+|+|+++++.|+++++..|+.++ |. .+.+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhh
Confidence 35999999 7888887667999999999999999999999887654 22 1122
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcc-hhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDER-YNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~-~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
-+...+++++.++|||||++++.+....... .. .....|... +|+ +++..++.+.++++ ||+++-..
T Consensus 127 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~--~~~--~~~~~~~~~~l~~a-Gf~~v~~~ 194 (257)
T 3f4k_A 127 IGFERGMNEWSKYLKKGGFIAVSEASWFTSERPA--EIEDFWMDA--YPE--ISVIPTCIDKMERA-GYTPTAHF 194 (257)
T ss_dssp CCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCH--HHHHHHHHH--CTT--CCBHHHHHHHHHHT-TEEEEEEE
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChH--HHHHHHHHh--CCC--CCCHHHHHHHHHHC-CCeEEEEE
Confidence 2688999999999999999999987533221 11 011223333 344 78999999999995 99987643
No 17
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.93 E-value=2.2e-09 Score=109.16 Aligned_cols=117 Identities=11% Similarity=0.121 Sum_probs=89.3
Q ss_pred hhhcccCchhHHHHhhhcccccchHHHHhccccccchh--------------------------ccccCCCeehhhc---
Q 043102 355 RHISRTNTLTQACRHISRHYDLSNELFCLFLDESLTYS--------------------------CALFKVREVIFLG--- 405 (525)
Q Consensus 355 ~~~~~~N~~~~s~~nIa~hYDl~nd~y~l~Ld~~m~ys--------------------------~a~f~~~rVLDIG--- 405 (525)
.++++..++......+...||+..++|+..+.+.+..+ .++-+..+|||||
T Consensus 54 ~~vl~~~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~ 133 (298)
T 3fpf_A 54 KHILDDAEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGP 133 (298)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCS
T ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCc
Confidence 34455566777788888889988888877666544111 1112234999999
Q ss_pred ----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc---ccCcccHHHHHHHHHhcc
Q 043102 406 ----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR---SFGHEYMEEFFGCCESLI 462 (525)
Q Consensus 406 ----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~---~vg~~~~~~~f~~i~r~L 462 (525)
++.+|+..|++|+|||+|++|++.|++++++.|+ ++ |. ....++...+++++.++|
T Consensus 134 G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~~d~~~~l~el~r~L 212 (298)
T 3fpf_A 134 LPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYV 212 (298)
T ss_dssp SCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTCSCHHHHHHHHHHHC
T ss_pred cHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCccCHHHHHHHHHHHc
Confidence 4667776799999999999999999999999888 44 22 223568899999999999
Q ss_pred CCCcEEEEEE
Q 043102 463 AKDGLFVLQF 472 (525)
Q Consensus 463 kpGG~~viq~ 472 (525)
||||++++..
T Consensus 213 kPGG~Lvv~~ 222 (298)
T 3fpf_A 213 DTETRIIYRT 222 (298)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999976
No 18
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.91 E-value=4.3e-10 Score=117.68 Aligned_cols=125 Identities=7% Similarity=-0.091 Sum_probs=85.7
Q ss_pred eCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc------eeEeccCCCCCCCCCCCccccccccCCCC-C------CC-
Q 043102 124 FYNSCVMALHAPDALKILGNQATFDETRTGGAFH------DIFLHCDKNSMPQNPAAWSAWSFLGSLDS-K------NL- 189 (525)
Q Consensus 124 ~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~------~~vlHtD~s~mP~~~~aWaswNy~~~~~~-~------nl- 189 (525)
.||+||+|+|+++++++ .|+.++ ..+.| |. |..+..| .|||...... . |+
T Consensus 237 ~aD~VI~t~p~~~l~~~-----------~l~~l~y~s~~~~~~~~-~~---~~~~~~~-~~~~~~~~~~~~ri~~~~~~~ 300 (399)
T 1v0j_A 237 PAAPVVYTGPLDRYFDY-----------AEGRLGWRTLDFEVEVL-PI---GDFQGTA-VMNYNDLDVPYTRIHEFRHFH 300 (399)
T ss_dssp TTCCEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEE-SS---SCSSSSS-EEEECCTTSSCSEEEEGGGGC
T ss_pred cCCEEEECCcHHHHHhh-----------hhCCCCcceEEEEEEEE-cc---ccCCCCe-EEEeCCCCCCcceeEeecCCC
Confidence 69999999999998876 466776 55667 65 3323333 3566432111 0 22
Q ss_pred CC---CCCCeEEEcCCCCCCcceeeEEEecCCCCCHHHHHHHHHhhhhcC-C---CCeEEeccC--CCCCCchhhhchHH
Q 043102 190 GE---TSLPYLVTLNPDHAPEHTLLKWSTGPPVPFVAASKASLELGHIQG-R---RGIWFRGAY--QGYGFHEDGLKDLS 260 (525)
Q Consensus 190 ~~---~~~~~fvTLNp~~~p~~il~~~~y~HPv~~~~a~~aq~~l~~iqG-~---~~~~fcGay--~g~GfHEdg~~Sgl 260 (525)
+. .+...+|++|+....++ ...+.||+++....++++++..+++ . ++|||||+| ++|++||||+.||+
T Consensus 301 ~~~~~~~~~~~v~~e~~~~~~~---~~~~~ypv~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~e~~i~sa~ 377 (399)
T 1v0j_A 301 PERDYPTDKTVIMREYSRFAED---DDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQYLDMHMAIASAL 377 (399)
T ss_dssp TTSCCCSSCEEEEEEEEEECCT---TSCCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHTCCCCHHHHHHHHH
T ss_pred CCCcCCCCCeEEEEeecccccC---CCccccccCcHHHHHHHHHHHHHHHhccccCCEEEccceEEEEecCHHHHHHHHH
Confidence 11 01235666664432221 1235699999999999999999885 4 799999998 67788999999999
Q ss_pred HHHhhhc
Q 043102 261 INSCMTY 267 (525)
Q Consensus 261 ~aA~~ll 267 (525)
+||+.++
T Consensus 378 ~~a~~l~ 384 (399)
T 1v0j_A 378 NMYDNVL 384 (399)
T ss_dssp HHHHHTH
T ss_pred HHHHHHh
Confidence 9999984
No 19
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.87 E-value=6.3e-09 Score=105.33 Aligned_cols=169 Identities=14% Similarity=0.102 Sum_probs=108.5
Q ss_pred HhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHHhhcCC---CCHHHHhhccCC
Q 043102 80 SLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALKILGNQ---ATFDETRTGGAF 156 (525)
Q Consensus 80 ~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~~---~t~~E~~iLg~f 156 (525)
.+|+++..+..+.+|..+. .+|.|.+.+|....||.||+|||++++++||.+. ..+++++.|+.+
T Consensus 121 ~~g~~i~~~~~V~~i~~~~------------~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~ 188 (342)
T 3qj4_A 121 ESGAEVYFRHRVTQINLRD------------DKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAV 188 (342)
T ss_dssp HHTCEEESSCCEEEEEECS------------SSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTC
T ss_pred hcCCEEEeCCEEEEEEEcC------------CEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcC
Confidence 3478887777766664321 2688888888778899999999999999999741 133568899999
Q ss_pred c-----eeEeccCCC-CCCC---------CC-CCccccccccCCCCCCCCCCCCCeEE-EcCC-----------------
Q 043102 157 H-----DIFLHCDKN-SMPQ---------NP-AAWSAWSFLGSLDSKNLGETSLPYLV-TLNP----------------- 202 (525)
Q Consensus 157 ~-----~~vlHtD~s-~mP~---------~~-~aWaswNy~~~~~~~nl~~~~~~~fv-TLNp----------------- 202 (525)
+ .++||.|.. ..+. .. ..|..++-.... . +-+. ..+.+| ...+
T Consensus 189 ~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~-r-~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 265 (342)
T 3qj4_A 189 SYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRN-I-ESSE-IGPSLVIHTTVPFGVTYLEHSIEDVQEL 265 (342)
T ss_dssp CBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTT-C-CCC--CCCEEEEEECHHHHHHTTTSCHHHHHHH
T ss_pred CccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCC-C-CCCC-CCceEEEECCHHHHHHhhcCCHHHHHHH
Confidence 8 778998864 2221 11 234333222110 0 0110 112332 1110
Q ss_pred -----------CCCCcc-eeeEEEecCCCCCHHHHHHHHHhhhh--cCCCCeEEeccCCCCCCchhhhchHHHHHhhhcC
Q 043102 203 -----------DHAPEH-TLLKWSTGPPVPFVAASKASLELGHI--QGRRGIWFRGAYQGYGFHEDGLKDLSINSCMTYG 268 (525)
Q Consensus 203 -----------~~~p~~-il~~~~y~HPv~~~~a~~aq~~l~~i--qG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~llG 268 (525)
..+|.. ..++|+|..|.+.... ....+ ....++++||+|+.-+-.|||+.||.++|+.++.
T Consensus 266 ~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~-----~~~~~~~~~~~~l~laGd~~~g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 266 VFQQLENILPGLPQPIATKCQKWRHSQVTNAAAN-----CPGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp HHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSS-----SCSCEEEETTTEEEECSGGGSCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCCCCceeeeccccccccccccCC-----CcceeEecCCccEEEEccccCCCCccHHHHHHHHHHHHHHh
Confidence 112332 5679999999986521 12223 3567899999999989999999999999999853
No 20
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.85 E-value=2.5e-09 Score=102.17 Aligned_cols=123 Identities=13% Similarity=0.142 Sum_probs=83.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC-C-------CC-----C-Cc--------ccCc
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD-L-------ER-----N-DR--------SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g-l-------~d-----~-D~--------~vg~ 448 (525)
..+||||| +..+++.. +++|+|+|+|+++++.|+++++..+ + .+ . |. |+..
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 124 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHLED 124 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGSCH
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccCCH
Confidence 35999999 67777765 8899999999999999999976433 0 00 0 33 3444
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcc-------------cCchhHHhhc--ccCCCCCCCHHHHHHHHHhc
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEF-------------RLSSDFMKEY--IFPGGCLPSLSRITSAMSAA 513 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~-------------~~~~~fi~kY--IFPGg~LPsl~~i~~~~~~a 513 (525)
.....+++++.++|||||++++.+...++...... .....-+... -......++.+++.+.++++
T Consensus 125 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 204 (234)
T 3dtn_A 125 EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEA 204 (234)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHc
Confidence 45557999999999999999998877655421100 0001111110 01334667899999999996
Q ss_pred CCcEEEEE
Q 043102 514 SRLWYNLA 521 (525)
Q Consensus 514 ~gl~V~~~ 521 (525)
||+++-.
T Consensus 205 -GF~~v~~ 211 (234)
T 3dtn_A 205 -GFRDVSC 211 (234)
T ss_dssp -TCEEEEE
T ss_pred -CCCceee
Confidence 9997644
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.84 E-value=8.4e-09 Score=99.69 Aligned_cols=118 Identities=10% Similarity=0.006 Sum_probs=85.7
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--c--c--C
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR--S--F--G 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~--~--v--g 447 (525)
+..+||||| +..+++..|++|+|+|+|+++++.|+++++..|+.++ |. . + .
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~~~ 115 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWI 115 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCChHh
Confidence 345999999 7788887799999999999999999999998887644 22 0 0 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccC-CCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFP-GGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFP-Gg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
..+...+++++.++|||||++++.+....... ....+.+.+..+ ...+++..++.+.++++ ||+++-
T Consensus 116 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~ 183 (256)
T 1nkv_A 116 AGGFAGAEELLAQSLKPGGIMLIGEPYWRQLP-----ATEEIAQACGVSSTSDFLTLPGLVGAFDDL-GYDVVE 183 (256)
T ss_dssp TSSSHHHHHHHTTSEEEEEEEEEEEEEETTCC-----SSHHHHHTTTCSCGGGSCCHHHHHHHHHTT-TBCCCE
T ss_pred cCCHHHHHHHHHHHcCCCeEEEEecCcccCCC-----ChHHHHHHHhcccccccCCHHHHHHHHHHC-CCeeEE
Confidence 23678999999999999999999776543221 112222221111 12668999999999995 898654
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.82 E-value=7.1e-09 Score=102.44 Aligned_cols=122 Identities=12% Similarity=0.075 Sum_probs=85.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc----cc--C
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR----SF--G 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~----~v--g 447 (525)
.+||||| +..+++. |++|+|||+|+++++.|+++++..|+..+ |. .+ .
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 148 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEW 148 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGG
T ss_pred CEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhc
Confidence 4999999 7778876 99999999999999999999988776432 22 00 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcc-cCchhHHhhccc-------CCCCCCCHHHHHHHHHhcCCcEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEF-RLSSDFMKEYIF-------PGGCLPSLSRITSAMSAASRLWYN 519 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~-~~~~~fi~kYIF-------PGg~LPsl~~i~~~~~~a~gl~V~ 519 (525)
..+...+++++.++|||||++++.........+... ......+...+. ......+.+++.+.++++ ||+++
T Consensus 149 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~v~ 227 (285)
T 4htf_A 149 VADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA-GWQIM 227 (285)
T ss_dssp CSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT-TCEEE
T ss_pred ccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC-CCcee
Confidence 346789999999999999999998775432211110 111122222221 123567899999999996 99987
Q ss_pred EEE
Q 043102 520 LAV 522 (525)
Q Consensus 520 ~~~ 522 (525)
-..
T Consensus 228 ~~~ 230 (285)
T 4htf_A 228 GKT 230 (285)
T ss_dssp EEE
T ss_pred eee
Confidence 543
No 23
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.81 E-value=1.4e-08 Score=95.91 Aligned_cols=122 Identities=13% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHH-HcC-----CC-----CC-Cc--------ccCccc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVK-EAD-----LE-----RN-DR--------SFGHEY 450 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~-~~g-----l~-----d~-D~--------~vg~~~ 450 (525)
+..+||||| +..++++ +++|+|+|+|+++++.|++++. ... +. .. |. |+....
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~ 123 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLTDDE 123 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSCHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCChHH
Confidence 345999999 6777775 9999999999999999999865 110 00 01 43 333333
Q ss_pred HHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhc-------ccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEY-------IFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kY-------IFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
...+++++.++|||||++++.+......... .....+.... -.+..++|+.+++.+.++++ ||+|....
T Consensus 124 ~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~v~~~~ 199 (220)
T 3hnr_A 124 KNVAIAKYSQLLNKGGKIVFADTIFADQDAY--DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENN-GFHVTFTR 199 (220)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEECBSSHHHH--HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEeccccChHHH--HHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHC-CCEEEEee
Confidence 4459999999999999999987655432211 0001111110 11223678999999999995 99987653
No 24
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.77 E-value=6.5e-09 Score=104.26 Aligned_cols=124 Identities=13% Similarity=0.078 Sum_probs=88.5
Q ss_pred CCeehhhc------HHHHH--HhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------
Q 043102 398 VREVIFLG------TIEVV--KRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR-------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA--~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~-------- 444 (525)
..+||||| ++.+| ...+++|+|+|+|+++++.|+++++..|+.++ |.
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 198 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGLNI 198 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSSGG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECChhh
Confidence 45999999 55553 33578999999999999999999988777543 22
Q ss_pred cc-CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchh-------cccCchhHHhhcccCCC------CCCCHHHHHHHH
Q 043102 445 SF-GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYN-------EFRLSSDFMKEYIFPGG------CLPSLSRITSAM 510 (525)
Q Consensus 445 ~v-g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~-------~~~~~~~fi~kYIFPGg------~LPsl~~i~~~~ 510 (525)
|+ .......+++++.++|||||++++.++..+..... .+.....++.+++|+.. .+.+.+++.+.+
T Consensus 199 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 278 (305)
T 3ocj_A 199 YEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQL 278 (305)
T ss_dssp GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHH
Confidence 22 23344568999999999999999988765432110 12222335555555533 557999999999
Q ss_pred HhcCCcEEEEEE
Q 043102 511 SAASRLWYNLAV 522 (525)
Q Consensus 511 ~~a~gl~V~~~~ 522 (525)
+++ ||+++-..
T Consensus 279 ~~a-GF~~v~~~ 289 (305)
T 3ocj_A 279 EEA-GFTDLRFE 289 (305)
T ss_dssp HHT-TCEEEEEE
T ss_pred HHC-CCEEEEEE
Confidence 996 99987654
No 25
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.73 E-value=3e-08 Score=93.93 Aligned_cols=109 Identities=13% Similarity=0.032 Sum_probs=74.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc---------------CCC----C---C------
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA---------------DLE----R---N------ 442 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~---------------gl~----d---~------ 442 (525)
+..+|||+| +..+|++ |++|+|||+|++|++.|+++.+.. .+. | -
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 345999999 8888886 999999999999999999986421 110 0 0
Q ss_pred --Cc--------ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHh
Q 043102 443 --DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSA 512 (525)
Q Consensus 443 --D~--------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~ 512 (525)
|. |+..+....+++++.++|||||++++.++....... . -| .+..+.+++.+.+++
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~----~---------~~-~~~~~~~el~~~~~~ 166 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL----E---------GP-PFSVPQTWLHRVMSG 166 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS----S---------SC-CCCCCHHHHHHTSCS
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc----C---------CC-CCCCCHHHHHHHhcC
Confidence 22 334456778999999999999997666654332100 0 01 112467888877765
Q ss_pred cCCcEEEEEE
Q 043102 513 ASRLWYNLAV 522 (525)
Q Consensus 513 a~gl~V~~~~ 522 (525)
||++....
T Consensus 167 --gf~i~~~~ 174 (203)
T 1pjz_A 167 --NWEVTKVG 174 (203)
T ss_dssp --SEEEEEEE
T ss_pred --CcEEEEec
Confidence 78876543
No 26
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.72 E-value=5e-08 Score=95.98 Aligned_cols=125 Identities=15% Similarity=0.143 Sum_probs=81.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc-------
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR------- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~------- 444 (525)
+..+||||| +..+++...++|+|+|+|+++++.|++++...++..+ |.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 345999999 6677775334999999999999999999887654221 22
Q ss_pred -c--cCcccHHHHHHHHHhccCCCcEEEEEEecCCCc------------chhcccC---chh--HHhhccc---CC----
Q 043102 445 -S--FGHEYMEEFFGCCESLIAKDGLFVLQFISIPDE------------RYNEFRL---SSD--FMKEYIF---PG---- 497 (525)
Q Consensus 445 -~--vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~------------~~~~~~~---~~~--fi~kYIF---PG---- 497 (525)
+ ...++...+++++.++|||||++++.......- .|..... ..+ +-.+|.| +.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 1 124567899999999999999999976542110 0000000 000 0011111 11
Q ss_pred -CCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 498 -GCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 498 -g~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+.+.+++.+.++++ ||+++-..
T Consensus 224 ~~~~~~~~~l~~ll~~a-Gf~~v~~~ 248 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRL-GLSLVERK 248 (298)
T ss_dssp EEECCCHHHHHHHHHTT-TEEEEEEE
T ss_pred cccccCHHHHHHHHHHc-CCEEEEec
Confidence 2467889999999995 99987543
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.72 E-value=2.4e-08 Score=93.61 Aligned_cols=121 Identities=16% Similarity=0.180 Sum_probs=79.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHH-HH-----cCCCC----C--Cc--------ccCcccH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKV-KE-----ADLER----N--DR--------SFGHEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~-~~-----~gl~d----~--D~--------~vg~~~~ 451 (525)
..+||||| +..+++. |++|+|+|+|+++++.|+++- .. ..+.+ . |. |+..+.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~ 125 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDDRF 125 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHHHH
T ss_pred CCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCHHHH
Confidence 35999999 7777776 999999999999999999721 00 00000 0 33 3444446
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcc--cCchhHHhhcccCCC-------CCCCHHHHHHHHHhcCCcEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEF--RLSSDFMKEYIFPGG-------CLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~--~~~~~fi~kYIFPGg-------~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
..+++++.++|||||++++.+...+....... ....+++.+. +|.+ .+++..++.+.++++ ||+|...
T Consensus 126 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~v~~~ 202 (218)
T 3ou2_A 126 EAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRT-LQDGRSFRIVKVFRSPAELTERLTAL-GWSCSVD 202 (218)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEE-CTTSCEEEEECCCCCHHHHHHHHHHT-TEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeee-cCCcchhhHhhcCCCHHHHHHHHHHC-CCEEEee
Confidence 89999999999999999999887643321110 0012222222 2222 367999999999995 9997654
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.69 E-value=5.4e-08 Score=94.64 Aligned_cols=121 Identities=13% Similarity=-0.007 Sum_probs=84.6
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc----cc--Cc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR----SF--GH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~----~v--g~ 448 (525)
..+||||| +..++++ +.+|+|+|+|++|++.|++++++.|+..- |. .+ ..
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~ 116 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHF 116 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhc
Confidence 35999999 6677765 67999999999999999999987765421 22 00 12
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccC-CCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFP-GGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFP-Gg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+...+++++.++|||||++++.....++.... ......+....-| .....+..++.+.++++ ||++....
T Consensus 117 ~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 188 (260)
T 1vl5_A 117 PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAF--DVFYNYVEKERDYSHHRAWKKSDWLKMLEEA-GFELEELH 188 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHHHHHHHH-TCEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHH--HHHHHHHHHhcCccccCCCCHHHHHHHHHHC-CCeEEEEE
Confidence 467899999999999999999987765543211 0111112222122 33567889999999996 99876543
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.68 E-value=4.2e-08 Score=92.87 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=82.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------------Cc-----
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------------DR----- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------------D~----- 444 (525)
..+||||| +..+++. |++|+|+|+|+++++.|+++++..++... |.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 34999999 7777876 99999999999999999999887766311 22
Q ss_pred ---ccC-cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccC--chhH---------HhhcccC-----CCCCCCHH
Q 043102 445 ---SFG-HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRL--SSDF---------MKEYIFP-----GGCLPSLS 504 (525)
Q Consensus 445 ---~vg-~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~--~~~f---------i~kYIFP-----Gg~LPsl~ 504 (525)
++. ...+..+++++.++|||||++++.+........ .+.. ...+ ....-.. .....+.+
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK-LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEK 188 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH-HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHH
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH-HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHH
Confidence 221 233458999999999999999998876532210 0000 0000 0000000 01467999
Q ss_pred HHHHHHHhcCCcEEEEEE
Q 043102 505 RITSAMSAASRLWYNLAV 522 (525)
Q Consensus 505 ~i~~~~~~a~gl~V~~~~ 522 (525)
++.+.++++ ||++.-..
T Consensus 189 ~l~~ll~~a-Gf~~~~~~ 205 (235)
T 3sm3_A 189 ELVFLLTDC-RFEIDYFR 205 (235)
T ss_dssp HHHHHHHTT-TEEEEEEE
T ss_pred HHHHHHHHc-CCEEEEEE
Confidence 999999996 99987654
No 30
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.68 E-value=9e-09 Score=102.69 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=61.6
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC--CC-----------------Cc---------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE--RN-----------------DR--------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~--d~-----------------D~--------- 444 (525)
.+||||| +..++++ |++|+|||+|+++++.|++++...++. .+ |.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 162 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSIN 162 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHHT
T ss_pred CcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcccc
Confidence 4999999 7788876 899999999999999999998876521 11 32
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
++..++...+++++.++|||||++++.....
T Consensus 163 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 163 ELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp TSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 2234467899999999999999999987654
No 31
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.67 E-value=5.9e-08 Score=91.25 Aligned_cols=112 Identities=14% Similarity=0.122 Sum_probs=79.8
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-------CC-CC--Cc--------ccCcccHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-------LE-RN--DR--------SFGHEYMEE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-------l~-d~--D~--------~vg~~~~~~ 453 (525)
..+||||| +..+++. |++|+|+|+|+++++.|++++...- +. +. |. |+..++...
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~ 122 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDELAD 122 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHHHHH
Confidence 45999999 7777775 8999999999999999999862100 01 00 33 444557889
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCC-cEEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASR-LWYNLAV 522 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~g-l~V~~~~ 522 (525)
+++++.++|||||++++.......... +....+ ....+.+++.+.++++ | |+++-..
T Consensus 123 ~l~~~~~~LkpgG~l~~~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~l~~a-G~f~~~~~~ 180 (211)
T 3e23_A 123 VLKLIWRALKPGGLFYASYKSGEGEGR-------DKLARY----YNYPSEEWLRARYAEA-GTWASVAVE 180 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCSSCEE-------CTTSCE----ECCCCHHHHHHHHHHH-CCCSEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEcCCCcccc-------cccchh----ccCCCHHHHHHHHHhC-CCcEEEEEE
Confidence 999999999999999997654332211 111111 2457999999999996 8 8876543
No 32
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.66 E-value=5.9e-08 Score=94.86 Aligned_cols=124 Identities=12% Similarity=0.110 Sum_probs=83.7
Q ss_pred CCCeehhhc------HHHHHHhcC--CEEEEEcCChH------HHHHHHHHHHHcCCCCC--------------------
Q 043102 397 KVREVIFLG------TIEVVKRTG--CKYTGITLAEK------QLKYAGIKVKEADLERN-------------------- 442 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G--~~VtGIdlS~e------ql~~Ar~r~~~~gl~d~-------------------- 442 (525)
+..+||||| +..++++.| ++|+|+|+|++ |++.|+++++..++.++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 345999999 778887654 89999999997 99999999887654221
Q ss_pred -Cc----cc--CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchh-HHhhccc------CCC--CCCCHHHH
Q 043102 443 -DR----SF--GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSD-FMKEYIF------PGG--CLPSLSRI 506 (525)
Q Consensus 443 -D~----~v--g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~-fi~kYIF------PGg--~LPsl~~i 506 (525)
|. .+ ...+...+++.+.++++|||++++.++..+............ +++..++ ++. .+++.+++
T Consensus 123 fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 202 (275)
T 3bkx_A 123 FDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTL 202 (275)
T ss_dssp CSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHH
T ss_pred EEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHH
Confidence 22 00 123456678888888888999999998876542211111111 1211111 222 57999999
Q ss_pred HHHHHhcCCcEEEEE
Q 043102 507 TSAMSAASRLWYNLA 521 (525)
Q Consensus 507 ~~~~~~a~gl~V~~~ 521 (525)
.+.++++ ||+++-.
T Consensus 203 ~~~l~~a-Gf~~~~~ 216 (275)
T 3bkx_A 203 AQIAHDN-TWTYTAG 216 (275)
T ss_dssp HHHHHHH-TCEEEEC
T ss_pred HHHHHHC-CCeeEEE
Confidence 9999996 9998754
No 33
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.66 E-value=2.2e-07 Score=98.06 Aligned_cols=173 Identities=15% Similarity=0.176 Sum_probs=108.8
Q ss_pred HHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEe---CCCceEeCCEEEEecChHHHHHhhcCCCCHHHHhhcc
Q 043102 78 FESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVC---GDGSREFYNSCVMALHAPDALKILGNQATFDETRTGG 154 (525)
Q Consensus 78 ~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~---~~g~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg 154 (525)
-+.+|+++.++..+.+|..+. .++.|.+ .+|++..+|+||+|+++.++.+||.. .+++.++.|.
T Consensus 245 ~~~lg~~i~~~~~V~~i~~~~------------~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~-l~~~~~~~l~ 311 (478)
T 2ivd_A 245 AASLGDAAHVGARVEGLARED------------GGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP-LDDALAALVA 311 (478)
T ss_dssp HHHHGGGEESSEEEEEEECC--------------CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT-TCHHHHHHHH
T ss_pred HHHhhhhEEcCCEEEEEEecC------------CeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc-cCHHHHHHHh
Confidence 344577787777777775421 1356666 56767889999999999999999973 6677778888
Q ss_pred CCc-----eeEeccCCCCCCCCCCCccccccccCC--CCC---------CCC---CCCCCeE---EEcCC----------
Q 043102 155 AFH-----DIFLHCDKNSMPQNPAAWSAWSFLGSL--DSK---------NLG---ETSLPYL---VTLNP---------- 202 (525)
Q Consensus 155 ~f~-----~~vlHtD~s~mP~~~~aWaswNy~~~~--~~~---------nl~---~~~~~~f---vTLNp---------- 202 (525)
.++ .++++.|...+|.. .. |.+.... +.. +.+ +.+..++ +.-..
T Consensus 312 ~~~~~~~~~v~l~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~ 387 (478)
T 2ivd_A 312 GIAYAPIAVVHLGFDAGTLPAP-DG---FGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDED 387 (478)
T ss_dssp TCCBCCEEEEEEEECTTSSCCC-CS---SEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHH
T ss_pred cCCCCcEEEEEEEEccccCCCC-Cc---eEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHH
Confidence 877 78888887766642 11 2222110 000 000 1112221 11111
Q ss_pred ----------------CCCCcc-eeeEEEecCCCCCHHHHHHHHHhhhhcC-CCCeEEeccCC-CCCCchhhhchHHHHH
Q 043102 203 ----------------DHAPEH-TLLKWSTGPPVPFVAASKASLELGHIQG-RRGIWFRGAYQ-GYGFHEDGLKDLSINS 263 (525)
Q Consensus 203 ----------------~~~p~~-il~~~~y~HPv~~~~a~~aq~~l~~iqG-~~~~~fcGay~-g~GfHEdg~~Sgl~aA 263 (525)
...|.. ...+|.+..|.+++........+..... .+++||||+|+ +.| -|+++.||++||
T Consensus 388 ~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~g-v~gA~~SG~~aA 466 (478)
T 2ivd_A 388 ALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVG-LNDCIRNAAQLA 466 (478)
T ss_dssp HHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCC-HHHHHHHHHHHH
Confidence 111222 3457877888888876555544543332 47899999998 455 699999999999
Q ss_pred hhhcC
Q 043102 264 CMTYG 268 (525)
Q Consensus 264 ~~llG 268 (525)
+.+++
T Consensus 467 ~~i~~ 471 (478)
T 2ivd_A 467 DALVA 471 (478)
T ss_dssp HHHCC
T ss_pred HHHHH
Confidence 99854
No 34
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.64 E-value=1.1e-08 Score=95.61 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=82.3
Q ss_pred eehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----cc--Ccc
Q 043102 400 EVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR----SF--GHE 449 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~v--g~~ 449 (525)
+||||| +..++++.+++|+|+|+|+++++.|+++++..++.++ |. .+ ..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 125 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWE 125 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCS
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhcc
Confidence 999999 6777776688999999999999999999998887544 22 00 125
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEecCCCcchhccc-----CchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFR-----LSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~-----~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
+...+++++.++|||||++++.............. ....|... +-+.....+.+++.+.++++ ||+++-.
T Consensus 126 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~a-Gf~~v~~ 200 (219)
T 3dlc_A 126 DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEF-NRKNISQENVERFQNVLDEI-GISSYEI 200 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHH-HHHHSSHHHHHHHHHHHHHH-TCSSEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhh-hhhccccCCHHHHHHHHHHc-CCCeEEE
Confidence 77899999999999999999976544332111000 01112211 00122334778999999996 8976543
No 35
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.64 E-value=4e-08 Score=94.16 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=79.4
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------ccC
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~--------~vg 447 (525)
.+||||| +..+++ .|++|+|+|+|+++++.|+++++..+...+ |. ++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 146 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIE 146 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSC
T ss_pred CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcCC
Confidence 4999999 666666 589999999999999999999876442111 22 345
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.++...+++++.++|||||++++......+.. ... | +..+.+++.+.++++ ||+++...
T Consensus 147 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----~~~--------~--~~~~~~~~~~~l~~~-Gf~~~~~~ 205 (235)
T 3lcc_A 147 PEMRPAWAKSMYELLKPDGELITLMYPITDHV-----GGP--------P--YKVDVSTFEEVLVPI-GFKAVSVE 205 (235)
T ss_dssp GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC-----SCS--------S--CCCCHHHHHHHHGGG-TEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEecccccC-----CCC--------C--ccCCHHHHHHHHHHc-CCeEEEEE
Confidence 56889999999999999999998766443211 000 1 225789999999885 99987543
No 36
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.62 E-value=1.2e-07 Score=88.44 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=79.9
Q ss_pred eehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc------ccCcccH
Q 043102 400 EVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR------SFGHEYM 451 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~------~vg~~~~ 451 (525)
+||||| +..+++. |++|+|+|+|+++++.|+++++..++... |. |....+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 110 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLR 110 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHH
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHH
Confidence 999999 6777775 89999999999999999999876554111 33 3334578
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+++++.++|||||++++.........+.. ..+ .......+..++.+.++ ||++....
T Consensus 111 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~l~~~l~---Gf~v~~~~ 169 (202)
T 2kw5_A 111 QQLYPKVYQGLKPGGVFILEGFAPEQLQYNT---GGP------KDLDLLPKLETLQSELP---SLNWLIAN 169 (202)
T ss_dssp HHHHHHHHTTCCSSEEEEEEEECTTTGGGTS---CCS------SSGGGCCCHHHHHHHCS---SSCEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEeccccccCCC---CCC------CcceeecCHHHHHHHhc---CceEEEEE
Confidence 8999999999999999999887644332210 000 01124688999998887 78887643
No 37
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.62 E-value=1.1e-08 Score=99.51 Aligned_cols=75 Identities=9% Similarity=-0.012 Sum_probs=59.3
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------------Cc-----
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------------DR----- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------------D~----- 444 (525)
.|||||| +.++++..+.+|||||+|++|++.|+++.+..+...+ |.
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~ 141 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSE 141 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBG
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeeccc
Confidence 4999999 7778876678999999999999999999877664221 22
Q ss_pred -ccCcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 -SFGHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 -~vg~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
.....+.+.+++++.|+|||||+|++...
T Consensus 142 ~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 142 ETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp GGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred chhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence 11234678999999999999999987543
No 38
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.61 E-value=7.9e-08 Score=96.94 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=89.6
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------c
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR--------S 445 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~--------~ 445 (525)
..+||||| +..+++++ +++|+++|+| ++++.|++++++.++.++ |. +
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~ 244 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHH 244 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhcc
Confidence 35999999 67777764 7899999999 999999999887766543 22 2
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhc-ccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNE-FRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~-~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+..++...+++++.++|||||++++.+...++..... .....++......|++...+.+++.+.++++ ||+++-..
T Consensus 245 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~a-Gf~~~~~~ 321 (335)
T 2r3s_A 245 FDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNA-GFSHSQLH 321 (335)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHT-TCSEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHC-CCCeeeEE
Confidence 3345668999999999999999999888766532110 0111222222234688889999999999996 99876543
No 39
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.61 E-value=4.3e-08 Score=91.53 Aligned_cols=113 Identities=12% Similarity=0.138 Sum_probs=81.0
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC----------CCC--Cc--------ccCcccH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL----------ERN--DR--------SFGHEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl----------~d~--D~--------~vg~~~~ 451 (525)
..+||||| +..++++ |++|+|+|+|+++++.|+++.....+ .+. |. |+..++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHH
Confidence 35999999 7777875 89999999999999999998432111 111 33 4455688
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+++++.++|||||++++......... .. ..... .....+..++.+.++++ ||++.-..
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~-------~~~~~-~~~~~~~~~~~~~l~~~-Gf~~~~~~ 180 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLE--PM-------YHPVA-TAYRWPLPELAQALETA-GFQVTSSH 180 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCE--EE-------CCSSS-CEEECCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchh--hh-------hchhh-hhccCCHHHHHHHHHHC-CCcEEEEE
Confidence 9999999999999999999876544311 00 00111 22446899999999995 99987654
No 40
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.59 E-value=9e-08 Score=93.73 Aligned_cols=124 Identities=11% Similarity=0.075 Sum_probs=85.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc----c-c-C
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR----S-F-G 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~----~-v-g 447 (525)
..+||||| +..+++.. +++|+|+|+|+++++.|+++++..++... |. . + .
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 117 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEH 117 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhh
Confidence 45999999 67777764 78999999999999999999988776422 22 0 0 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcc-cCc----hhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEF-RLS----SDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~-~~~----~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+...+++++.++|||||++++.+.......+... ... ..+.......++...+..++.+.++++ ||+++-+.
T Consensus 118 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~~v~~~ 196 (276)
T 3mgg_A 118 LQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQES-GFEKIRVE 196 (276)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHT-TCEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHC-CCCeEEEe
Confidence 346789999999999999999998754321111000 001 111222224456666778899999996 99987554
No 41
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.58 E-value=2.5e-07 Score=95.63 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=91.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~vg 447 (525)
.+||||| +..+++++ +++++++|+ +++++.|++++.+.++.++ |. +..
T Consensus 204 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~ 282 (369)
T 3gwz_A 204 ATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWD 282 (369)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSC
T ss_pred cEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCC
Confidence 4999999 77777764 789999999 9999999999998887654 22 223
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEEe
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAVS 523 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~~ 523 (525)
.+....+++++.++|||||+++|.+...++..... ....++ .....+++...+.+++.+.++++ ||+++-...
T Consensus 283 d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~-~~~~~~~g~~~t~~e~~~ll~~a-Gf~~~~~~~ 355 (369)
T 3gwz_A 283 DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDL-LLLVLVGGAERSESEFAALLEKS-GLRVERSLP 355 (369)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHH-HHHHHHSCCCBCHHHHHHHHHTT-TEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhH-HHHhhcCCccCCHHHHHHHHHHC-CCeEEEEEE
Confidence 34445899999999999999999998877643211 111111 11234688899999999999996 999887654
No 42
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.58 E-value=1.6e-07 Score=92.76 Aligned_cols=108 Identities=12% Similarity=0.105 Sum_probs=76.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH--------------------cCCC-----------
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE--------------------ADLE----------- 440 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~--------------------~gl~----------- 440 (525)
..+|||+| +..+|++ |++|+|||+|+++++.|+++... ..+.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 45999999 8889986 99999999999999999887631 0100
Q ss_pred ---CC-Cc--------ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHH
Q 043102 441 ---RN-DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITS 508 (525)
Q Consensus 441 ---d~-D~--------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~ 508 (525)
.. |. ++..+....+++++.++|||||++++.++....... . -|. +..+.+++.+
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----~---------g~~-~~~~~~el~~ 213 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----A---------GPP-FYVPSAELKR 213 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----C---------CSS-CCCCHHHHHH
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----C---------CCC-CCCCHHHHHH
Confidence 00 22 344567889999999999999999876665332110 0 111 2257889998
Q ss_pred HHHhcCCcEEEEEE
Q 043102 509 AMSAASRLWYNLAV 522 (525)
Q Consensus 509 ~~~~a~gl~V~~~~ 522 (525)
.++. +|+|....
T Consensus 214 ~l~~--~f~v~~~~ 225 (252)
T 2gb4_A 214 LFGT--KCSMQCLE 225 (252)
T ss_dssp HHTT--TEEEEEEE
T ss_pred HhhC--CeEEEEEe
Confidence 8876 48886543
No 43
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.58 E-value=1.2e-07 Score=90.41 Aligned_cols=76 Identities=14% Similarity=0.250 Sum_probs=59.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc---------cc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR---------SF 446 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~---------~v 446 (525)
+..+||||| +..+++. |.+|+|+|+|+++++.|++++...++... |. |+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYI 115 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccccc
Confidence 345999999 7777775 89999999999999999999887653211 22 12
Q ss_pred -CcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 447 -GHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 447 -g~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
..++...+++++.++|||||++++...
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 116 IDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 125678999999999999999998654
No 44
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.57 E-value=2.8e-07 Score=93.47 Aligned_cols=118 Identities=15% Similarity=0.132 Sum_probs=88.6
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~vg 447 (525)
.+||||| +..+++++ +++++++|+ +++++.|++++++.++.++ |. +..
T Consensus 171 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~ 249 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWD 249 (332)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSC
T ss_pred CEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccCC
Confidence 3999999 77777764 789999999 9999999999998887654 22 233
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+....+++++.++|||||+++|.+...++. . .....++.. ...+++...+.+++.+.++++ ||+++-..
T Consensus 250 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~-~~~~~d~~~-~~~~~~~~~t~~e~~~ll~~a-Gf~~~~~~ 319 (332)
T 3i53_A 250 DLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--H-AGTGMDLRM-LTYFGGKERSLAELGELAAQA-GLAVRAAH 319 (332)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCCC------CCHHHHHHH-HHHHSCCCCCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--C-ccHHHHHHH-HhhCCCCCCCHHHHHHHHHHC-CCEEEEEE
Confidence 4456889999999999999999998877654 1 111122211 124678889999999999996 99987654
No 45
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.57 E-value=1.1e-07 Score=90.90 Aligned_cols=118 Identities=12% Similarity=0.093 Sum_probs=81.0
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC------------CC--Cc----cc--CcccH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE------------RN--DR----SF--GHEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~------------d~--D~----~v--g~~~~ 451 (525)
..+||||| +..++++ |++|+|||+|+++++.|+++....++. +. |. ++ ...+.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 132 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEP 132 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCH
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCH
Confidence 34999999 7777875 999999999999999999885222110 11 33 11 13577
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcc-cCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYI-FPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYI-FPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+++++.++|||||++++.......... ...+...+- .+.....+..++.+.++++ ||+++-..
T Consensus 133 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~ 198 (242)
T 3l8d_A 133 LRALNEIKRVLKSDGYACIAILGPTAKPR-----ENSYPRLYGKDVVCNTMMPWEFEQLVKEQ-GFKVVDGI 198 (242)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECTTCGGG-----GGGGGGGGTCCCSSCCCCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEEcCCcchhh-----hhhhhhhccccccccCCCHHHHHHHHHHc-CCEEEEee
Confidence 89999999999999999998765433211 122222221 1233457888999999995 99987543
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.57 E-value=2.2e-07 Score=87.78 Aligned_cols=119 Identities=16% Similarity=0.035 Sum_probs=75.5
Q ss_pred CCeehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcCCCC----C------------------Cc----
Q 043102 398 VREVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEADLER----N------------------DR---- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~gl~d----~------------------D~---- 444 (525)
..+||||| +..++++.+ ++|+|||+|+++++.|+++++..++.+ + |.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 34999999 777787533 799999999999999999987666542 1 22
Q ss_pred ----ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHH----HHHHhcCCc
Q 043102 445 ----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRIT----SAMSAASRL 516 (525)
Q Consensus 445 ----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~----~~~~~a~gl 516 (525)
|+..+.+..+++++.++|||||++++.... .+...-.......-.........+..++. +.++++ ||
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-Gf 184 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI----EYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERF-AY 184 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH----HHHHHTC-----------CCSCBCHHHHHHHHHHHHHHS-SE
T ss_pred HHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc----ccchhhcccccccccccccccccCHHHHHHHHHHHHHHc-Cc
Confidence 444556789999999999999977664321 11100000000000000011224777777 677774 99
Q ss_pred EEEEE
Q 043102 517 WYNLA 521 (525)
Q Consensus 517 ~V~~~ 521 (525)
+|.+.
T Consensus 185 ~v~~~ 189 (217)
T 3jwh_A 185 NVQFQ 189 (217)
T ss_dssp EEEEC
T ss_pred eEEEE
Confidence 98764
No 47
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.57 E-value=2.3e-07 Score=87.35 Aligned_cols=110 Identities=14% Similarity=-0.001 Sum_probs=81.6
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc----cc--
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR----SF-- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~----~v-- 446 (525)
..+||||| +..+++.. +++|+|+|+|+++++.|+++++..++..- |. .+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhh
Confidence 34999999 77777763 48999999999999999999988775421 22 00
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
...+...+++++.++|||||++++.++...+.... .. .....+.+++.+.++++ ||+++-.
T Consensus 118 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~l~~~-Gf~~~~~ 178 (219)
T 3dh0_A 118 ELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKG-----PP--------PEEVYSEWEVGLILEDA-GIRVGRV 178 (219)
T ss_dssp GCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS-----CC--------GGGSCCHHHHHHHHHHT-TCEEEEE
T ss_pred hcCCHHHHHHHHHHHhCCCeEEEEEEecccccccC-----Cc--------hhcccCHHHHHHHHHHC-CCEEEEE
Confidence 13467899999999999999999988765543110 11 11234889999999995 9997654
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.55 E-value=9.7e-08 Score=89.66 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=80.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH---------c---CCCCC---Cc-----ccCcccH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE---------A---DLERN---DR-----SFGHEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~---------~---gl~d~---D~-----~vg~~~~ 451 (525)
..+||||| +..+++. |++|+|+|+|+++++.|+++... . ..... |. .+...+.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 131 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDI 131 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhhhhH
Confidence 35999999 6777775 99999999999999999988110 0 00000 33 1125678
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhc--ccCC------CCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEY--IFPG------GCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kY--IFPG------g~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+++++.++|||||++++.+..........+ ...|.... -+++ .+..+++++.+.++++ ||+++-..
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 207 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQTLHPWSVADGDY--QDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMA-GLRLVSLQ 207 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCC--SCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEecCccccCcccc--ccccchhhhhccccCcccceEEEecHHHHHHHHHHc-CCeEEEEe
Confidence 89999999999999999998765432211000 11111110 0111 2456999999999995 99998654
No 49
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.55 E-value=1.6e-07 Score=96.86 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=86.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc--------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR-------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~-------- 444 (525)
.+||||| ++.+++++ +++|+++|+ +++++.|++++++.++.++ |.
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh 259 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLD 259 (363)
T ss_dssp SEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCST
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhh
Confidence 4999999 77888764 789999999 9999999999877665332 22
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhh----cccCCCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKE----YIFPGGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~k----YIFPGg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
+...++...+++++.++|||||+++|.+...++...........+... ....++...+.+++.+.++++ ||+++-
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~A-Gf~~v~ 338 (363)
T 3dp7_A 260 CFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENA-GLEVEE 338 (363)
T ss_dssp TSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTT-TEEESC
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHc-CCeEEE
Confidence 123445678899999999999999999887766432210000111111 123356678999999999996 998764
Q ss_pred E
Q 043102 521 A 521 (525)
Q Consensus 521 ~ 521 (525)
.
T Consensus 339 ~ 339 (363)
T 3dp7_A 339 I 339 (363)
T ss_dssp C
T ss_pred E
Confidence 3
No 50
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.55 E-value=2e-07 Score=89.90 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=84.0
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc----cc--C
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR----SF--G 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~----~v--g 447 (525)
+..+||||| +..+++. +.+|+|+|+|+++++.|++++++.++..- |. .+ .
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhh
Confidence 345999999 6677765 78999999999999999999887665321 22 01 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccC-CCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFP-GGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFP-Gg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+...+++++.++|||||++++.....++.... ......+....-| .....+..++.+.++++ ||++....
T Consensus 100 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a-Gf~~~~~~ 172 (239)
T 1xxl_A 100 FSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVL--DEFVNHLNRLRDPSHVRESSLSEWQAMFSAN-QLAYQDIQ 172 (239)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHHHHHHHT-TEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhH--HHHHHHHHHhccccccCCCCHHHHHHHHHHC-CCcEEEEE
Confidence 2467899999999999999999987765543210 0011111111112 23456899999999995 99876543
No 51
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.54 E-value=4.9e-08 Score=100.48 Aligned_cols=112 Identities=19% Similarity=0.182 Sum_probs=79.9
Q ss_pred cCCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------
Q 043102 396 FKVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR-------- 444 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~-------- 444 (525)
++..+||||| ++.+++...++|+|||+|+ |++.|++++++.|+.++ |.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 3456999999 7777775335999999995 99999999998887544 22
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCC------CcchhcccCchhHHhhcccCCCCCCCHHHHHH
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP------DERYNEFRLSSDFMKEYIFPGGCLPSLSRITS 508 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~------~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~ 508 (525)
|+..+.+...+..+.++|||||+++++..+.. +..+.......+|..+.+|||+.++++.++..
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~ 197 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAV 197 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHH
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHH
Confidence 33446678889999999999999997654322 11121111123444456899999999988753
No 52
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.54 E-value=1.9e-07 Score=94.48 Aligned_cols=76 Identities=8% Similarity=0.055 Sum_probs=58.2
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC-----------------------------CC-
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE-----------------------------RN- 442 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~-----------------------------d~- 442 (525)
.+||||| +..+++..+++|+|||+|++|++.|++++.+.++. +.
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 4999999 44555554689999999999999999998765421 01
Q ss_pred -Cc-------c--cCcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 443 -DR-------S--FGHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 443 -D~-------~--vg~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
|. | ...++...+++++.++|||||++++.++.
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 33 1 12246789999999999999999998764
No 53
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.53 E-value=1.8e-07 Score=95.97 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=85.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C----------c--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------D----------R--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D----------~--------~vg 447 (525)
.+||||| ++.+++++ +++++++|+ +++++.|+++++..++.++ | . ++.
T Consensus 184 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 262 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWS 262 (374)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGSC
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCCC
Confidence 4999999 77778764 789999999 9999999999988877644 2 2 223
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEe--cCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFI--SIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i--~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+....+++++.++|||||++++.++ ..++..........++. ...++++...+.+++.+.++++ ||+++-..
T Consensus 263 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~a-Gf~~~~~~ 337 (374)
T 1qzz_A 263 DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLR-MLTFMGGRVRTRDEVVDLAGSA-GLALASER 337 (374)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHH-HHHHHSCCCCCHHHHHHHHHTT-TEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchH-HHHhCCCcCCCHHHHHHHHHHC-CCceEEEE
Confidence 33446899999999999999999887 65543211111111111 1235678899999999999995 99987544
No 54
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.52 E-value=5.1e-08 Score=94.17 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=76.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC---------------C--Cc-----cc-Cc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER---------------N--DR-----SF-GH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d---------------~--D~-----~v-g~ 448 (525)
..+||||| +..++++ +++|+|+|+|++|++.|++++ ..+... . |. .+ ..
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCchhhc
Confidence 45999999 7788875 899999999999999999987 211110 0 22 01 12
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCC-cc-hhcccCchhHHhhcccC---CCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPD-ER-YNEFRLSSDFMKEYIFP---GGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~-~~-~~~~~~~~~fi~kYIFP---Gg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
.+...+++++.++|||||++++. +...+ .. +.-......++...-+| ....++..++.+.++++ ||++..
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 192 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL-GLKPRT 192 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT-TCCCEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc-CCCcce
Confidence 36789999999999999999987 32221 11 00000112223332233 22345677888888885 898654
No 55
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.51 E-value=3.5e-07 Score=86.46 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=74.5
Q ss_pred CCeehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcCCCC----C------------------Cc----
Q 043102 398 VREVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEADLER----N------------------DR---- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~gl~d----~------------------D~---- 444 (525)
..+||||| +..++++.+ ++|+|||+|+++++.|+++++..++.+ + |.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 35999999 677777533 799999999999999999987655432 1 33
Q ss_pred ----ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHH----HHHHhcCCc
Q 043102 445 ----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRIT----SAMSAASRL 516 (525)
Q Consensus 445 ----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~----~~~~~a~gl 516 (525)
|+..+.+..+++++.++|||||++++.........+... .... .+. .......+..++. +.++++ ||
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~-~~~~-~~~--~~~~~~~~~~~l~~~~~~l~~~~-Gf 184 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNL-FEGN-LRH--RDHRFEWTRKEFQTWAVKVAEKY-GY 184 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-------GG--GCCTTSBCHHHHHHHHHHHHHHH-TE
T ss_pred HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhccc-Cccc-ccc--cCceeeecHHHHHHHHHHHHHHC-Cc
Confidence 444456689999999999999966553321111111000 0000 000 0011224677777 667775 89
Q ss_pred EEEEE
Q 043102 517 WYNLA 521 (525)
Q Consensus 517 ~V~~~ 521 (525)
+|...
T Consensus 185 ~v~~~ 189 (219)
T 3jwg_A 185 SVRFL 189 (219)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98765
No 56
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.50 E-value=2.5e-07 Score=96.20 Aligned_cols=120 Identities=14% Similarity=0.047 Sum_probs=82.0
Q ss_pred CCCeehhhc------HHHHHHh--cCCEEEEEcCChHHHHHHHHHHHHc-----C-CC----------------------
Q 043102 397 KVREVIFLG------TIEVVKR--TGCKYTGITLAEKQLKYAGIKVKEA-----D-LE---------------------- 440 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~--~G~~VtGIdlS~eql~~Ar~r~~~~-----g-l~---------------------- 440 (525)
+..+||||| ++.+++. .+++|+|+|+|++|++.|+++++.. | +.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 445999999 6777776 3679999999999999999997643 2 11
Q ss_pred -CC--Cc----c-c-CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHH
Q 043102 441 -RN--DR----S-F-GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMS 511 (525)
Q Consensus 441 -d~--D~----~-v-g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~ 511 (525)
+. |. . + ...+...+++++.++|||||++++.++........... ....+ +....+...+..++.+.++
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQ-QDPIL--YGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHH-HCHHH--HHTTCTTCCBHHHHHHHHH
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHh-hhHHH--hhcccccCCCHHHHHHHHH
Confidence 11 22 0 0 12578999999999999999999988765432211111 11111 2223345578899999999
Q ss_pred hcCCcEEEE
Q 043102 512 AASRLWYNL 520 (525)
Q Consensus 512 ~a~gl~V~~ 520 (525)
++ ||+++-
T Consensus 240 ~a-GF~~v~ 247 (383)
T 4fsd_A 240 EA-GFRDVR 247 (383)
T ss_dssp HT-TCCCEE
T ss_pred HC-CCceEE
Confidence 96 897553
No 57
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.50 E-value=5.1e-07 Score=92.59 Aligned_cols=118 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~vg 447 (525)
.+||||| +..+++++ +++|+++|+ +++++.|++++++.++.++ |. ++.
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~ 270 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSAN 270 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSC
T ss_pred CEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCC
Confidence 4999999 77778764 789999999 9999999999998887654 22 223
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcc--cCCCCC----CCHHHHHHHHHhcCCcEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYI--FPGGCL----PSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYI--FPGg~L----Psl~~i~~~~~~a~gl~V~~~ 521 (525)
.+....+++++.++|||||++++.+...++.... ....+. .++ ..++.. .+.+++.+.++++ ||+++-.
T Consensus 271 d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~---~~~~~~-~~~~~~~~g~~~~~~~t~~e~~~ll~~a-Gf~~v~~ 345 (359)
T 1x19_A 271 EQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENP---NFDYLS-HYILGAGMPFSVLGFKEQARYKEILESL-GYKDVTM 345 (359)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSC---CHHHHH-HHGGGGGSSCCCCCCCCGGGHHHHHHHH-TCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCc---hHHHHH-HHHHhcCCCCcccCCCCHHHHHHHHHHC-CCceEEE
Confidence 3447889999999999999999988776653110 011111 111 233444 8999999999996 9997655
Q ss_pred E
Q 043102 522 V 522 (525)
Q Consensus 522 ~ 522 (525)
.
T Consensus 346 ~ 346 (359)
T 1x19_A 346 V 346 (359)
T ss_dssp E
T ss_pred E
Confidence 4
No 58
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.49 E-value=6e-08 Score=93.39 Aligned_cols=113 Identities=14% Similarity=0.147 Sum_probs=80.1
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC---------------CC-C-Cc--------cc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL---------------ER-N-DR--------SF 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl---------------~d-~-D~--------~v 446 (525)
..+||||| +..++++.+++|+|+|+|+++++.|++++...+. .+ . |. |+
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 159 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHL 159 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhC
Confidence 45999999 6666766566999999999999999999866421 00 0 22 33
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
..+.+..+++++.++|||||++++.+........ ... ..+....+..++.+.++++ ||+++-..
T Consensus 160 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 223 (241)
T 2ex4_A 160 TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVI---------LDD--VDSSVCRDLDVVRRIICSA-GLSLLAEE 223 (241)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEE---------EET--TTTEEEEBHHHHHHHHHHT-TCCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcce---------ecc--cCCcccCCHHHHHHHHHHc-CCeEEEee
Confidence 3445779999999999999999998765543110 000 1222345899999999995 99887653
No 59
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.49 E-value=2.3e-07 Score=88.24 Aligned_cols=122 Identities=14% Similarity=0.111 Sum_probs=79.9
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC-----------CCC--Cc----cc--CcccH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL-----------ERN--DR----SF--GHEYM 451 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl-----------~d~--D~----~v--g~~~~ 451 (525)
+..+||||| +..+++. +.+|+|||+|+++++.|+++... ++ .+. |. ++ ...+.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-GITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH
T ss_pred CCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH
Confidence 455999999 6677764 78999999999999999998642 11 111 43 11 12467
Q ss_pred HHHHHHHH-hccCCCcEEEEEEecCCCcchh-----cc-cCchhHHhhc-ccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 452 EEFFGCCE-SLIAKDGLFVLQFISIPDERYN-----EF-RLSSDFMKEY-IFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 452 ~~~f~~i~-r~LkpGG~~viq~i~~~~~~~~-----~~-~~~~~fi~kY-IFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
..+++++. ++|||||++++........... .. .....+.... ........+..++.+.++++ ||+++-.
T Consensus 120 ~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~ 196 (250)
T 2p7i_A 120 VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRA-GLQVTYR 196 (250)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHC-CCeEEEE
Confidence 89999999 9999999999987643321100 00 0000000000 11223567899999999995 9998754
No 60
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.49 E-value=1e-07 Score=87.83 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=59.4
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc---ccC---
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR---SFG--- 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~---~vg--- 447 (525)
+.+||||| ++.+|++ +++|+|||+|+++++.|++++++.|+..- |. ..+
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLP 101 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC---
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCC
Confidence 35999999 7888886 99999999999999999999988776211 22 111
Q ss_pred ---------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 448 ---------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 448 ---------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
......+++++.++|||||++++....
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 102 SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp --------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 134457889999999999999986553
No 61
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.49 E-value=2.6e-07 Score=94.15 Aligned_cols=121 Identities=19% Similarity=0.177 Sum_probs=89.4
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc-------
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~------- 444 (525)
..+||||| +..+++++ +++++++|+ +++++.|++++++.++.++ |.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 45999999 67777764 689999999 8899999999988776543 22
Q ss_pred -ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhc-ccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 445 -SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNE-FRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 445 -~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~-~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
+...++...+++++.++|||||++++.+...++..... .....++.....++++...+.+++.+.++++ ||+++-
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a-Gf~~~~ 335 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDA-GLAVGE 335 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHT-TCEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHC-CCceee
Confidence 22334568999999999999999999988876643110 0011122222235788899999999999995 999875
No 62
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.49 E-value=6.1e-08 Score=93.87 Aligned_cols=112 Identities=19% Similarity=0.223 Sum_probs=68.5
Q ss_pred Ceehhhc------HHHHHHh-cCCEEEEEcCC-hHHHHHH---HHHHHHcCCCCC-----Cc--------------cc--
Q 043102 399 REVIFLG------TIEVVKR-TGCKYTGITLA-EKQLKYA---GIKVKEADLERN-----DR--------------SF-- 446 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~-~G~~VtGIdlS-~eql~~A---r~r~~~~gl~d~-----D~--------------~v-- 446 (525)
.+||||| ++.+|++ .+++|+|||+| +.|++.| ++++++.|+.+. |. .+
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~ 105 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILF 105 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEES
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeC
Confidence 3899999 7778854 58899999999 5555555 888887777532 22 00
Q ss_pred C--------cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHH-----HHHHHHHhc
Q 043102 447 G--------HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLS-----RITSAMSAA 513 (525)
Q Consensus 447 g--------~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~-----~i~~~~~~a 513 (525)
. ....+.+++++.|+|||||++++. ++..+. ++ ..++..+ .+| .++.. ++.+.++++
T Consensus 106 ~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~-~~~~~~-~~----~~~~~~~-~~~---~~~~~~~~~~el~~~l~~a 175 (225)
T 3p2e_A 106 PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV-TTYSDS-YE----EAEIKKR-GLP---LLSKAYFLSEQYKAELSNS 175 (225)
T ss_dssp CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE-ECCCC-----------------------CCHHHHHSHHHHHHHHHH
T ss_pred CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE-Eecccc-ch----hchhhhc-CCC---CCChhhcchHHHHHHHHHc
Confidence 0 012357899999999999999993 333332 21 1111111 122 12322 488888885
Q ss_pred CCcEEEEE
Q 043102 514 SRLWYNLA 521 (525)
Q Consensus 514 ~gl~V~~~ 521 (525)
||+|.-.
T Consensus 176 -Gf~v~~~ 182 (225)
T 3p2e_A 176 -GFRIDDV 182 (225)
T ss_dssp -TCEEEEE
T ss_pred -CCCeeee
Confidence 9998754
No 63
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.48 E-value=1.4e-07 Score=88.48 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=73.3
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----C----------c---ccCcccHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----D----------R---SFGHEYMEE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D----------~---~vg~~~~~~ 453 (525)
..+||||| ++.+++...++|+|+|+|+++++.|+++++..++.+- | . ......+..
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~~~~ 140 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEILLD 140 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHHHHH
Confidence 34999999 6777775234999999999999999999998876532 2 2 122455788
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
+++++.++|||||++++..+... +..++.+.++++ ||++.-.
T Consensus 141 ~l~~~~~~L~~gG~l~~~~~~~~-------------------------~~~~~~~~~~~~-Gf~~~~~ 182 (205)
T 3grz_A 141 LIPQLDSHLNEDGQVIFSGIDYL-------------------------QLPKIEQALAEN-SFQIDLK 182 (205)
T ss_dssp HGGGSGGGEEEEEEEEEEEEEGG-------------------------GHHHHHHHHHHT-TEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEecCcc-------------------------cHHHHHHHHHHc-CCceEEe
Confidence 99999999999999999655321 355667777774 7877654
No 64
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.46 E-value=5.9e-07 Score=82.84 Aligned_cols=109 Identities=7% Similarity=-0.027 Sum_probs=77.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------cc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SF 446 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~v 446 (525)
+..+||||| +..+++. |++|+|+|+|+++++.|+++++..++..- |. |+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFL 110 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGGS
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhhC
Confidence 345999999 7778876 99999999999999999999887665221 22 34
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
..++...+++++.++|||||++++.+...++. +. .. .+..+..+.+++.+.+++ |++.-.
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~-~~---~~--------~~~~~~~~~~~l~~~~~~---f~~~~~ 170 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVAAMDTAD-YP---CT--------VGFPFAFKEGELRRYYEG---WERVKY 170 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSS-SC---CC--------SCCSCCBCTTHHHHHTTT---SEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEEeeccCC-cC---CC--------CCCCCccCHHHHHHHhcC---CeEEEe
Confidence 45588999999999999999988765543332 11 00 122345577788877754 676543
No 65
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.46 E-value=4e-07 Score=88.93 Aligned_cols=80 Identities=8% Similarity=0.096 Sum_probs=66.7
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+..+||||| ++.+|+.. +++|+|||+|+++++.|++++++.|+.++ |+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 345999999 77888764 68999999999999999999999998765 22
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
......+..+++++.++|||||+++++.+...
T Consensus 143 d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 143 DADKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred CCchHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 11356789999999999999999999887654
No 66
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.45 E-value=1.2e-07 Score=91.50 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=65.5
Q ss_pred Ceehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCC-CC------Cc-----------------cc
Q 043102 399 REVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLE-RN------DR-----------------SF 446 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~-d~------D~-----------------~v 446 (525)
++||||| ++.+|+.. +++|++||+|+++++.|++++++.|+. ++ |+ ..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3899999 77888753 789999999999999999999999987 44 22 12
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
...++..|++++.++|||||+++++.+...
T Consensus 138 ~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 138 SPMDLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp CTTTHHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred cHHHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 356789999999999999999999877653
No 67
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.43 E-value=5e-07 Score=85.74 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=61.3
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc-------------cc-CcccH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR-------------SF-GHEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~-------------~v-g~~~~ 451 (525)
..+||||| ++.+|+. +++|+|||+|+++++.|+++++..|+.++ |. .+ +.-+.
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 134 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGGSQ 134 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCCCH
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcccH
Confidence 45999999 7888887 99999999999999999999998888743 22 11 11245
Q ss_pred HHHHHHHHhccCCCcEEEEEEec
Q 043102 452 EEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+ +++++.++|||||++++..++
T Consensus 135 ~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 135 A-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp H-HHHHHHHHSCTTCEEEEEECS
T ss_pred H-HHHHHHHhcCCCcEEEEEecC
Confidence 6 999999999999999997664
No 68
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.43 E-value=8.2e-07 Score=83.21 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=60.9
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc---ccCccc
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~---~vg~~~ 450 (525)
..+||||| ++.+++.. +++|+|+|+|+++++.|+++++..|+..- |. .....+
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 120 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGGM 120 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTTC
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCcC
Confidence 45999999 77888763 48999999999999999999988776311 22 112347
Q ss_pred HHHHHHHHHhccCCCcEEEEEEe
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i 473 (525)
...+++++.++|||||++++...
T Consensus 121 ~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 121 LEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCeEEEEEec
Confidence 89999999999999999999654
No 69
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.43 E-value=4.8e-07 Score=85.84 Aligned_cols=80 Identities=15% Similarity=0.202 Sum_probs=66.6
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+..+||||| ++.+|+.. +++|+|+|+|+++++.|++++++.|+.++ |.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 345999999 78888764 78999999999999999999999998764 22
Q ss_pred --ccCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 445 --SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 445 --~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
......++.+|+.+.++|||||+++++.+...
T Consensus 138 ~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 138 FIDADKQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 11245789999999999999999999877654
No 70
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.43 E-value=4.5e-07 Score=92.66 Aligned_cols=121 Identities=17% Similarity=0.255 Sum_probs=87.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C----------c--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------D----------R--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D----------~--------~vg 447 (525)
.+||||| +..++++. +++++++|+ +++++.|+++++..++.++ | . ++.
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 263 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWP 263 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSC
T ss_pred cEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCCC
Confidence 4999999 67777764 689999999 9999999999988877644 2 2 223
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEec-CCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFIS-IPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~-~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.++...+++++.++|||||++++.+.. .++..........++. ...++|+...+.+++.+.++++ ||+++-..
T Consensus 264 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~a-Gf~~~~~~ 337 (360)
T 1tw3_A 264 DHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLR-MLVFLGGALRTREKWDGLAASA-GLVVEEVR 337 (360)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHH-HHHHHSCCCCBHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHH-HhhhcCCcCCCHHHHHHHHHHC-CCeEEEEE
Confidence 334468999999999999999998877 5543110000111111 1124578889999999999996 99987543
No 71
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.42 E-value=2.1e-07 Score=88.78 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=78.2
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC------------CC--Cc----c-c-Ccc
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE------------RN--DR----S-F-GHE 449 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~------------d~--D~----~-v-g~~ 449 (525)
+..+||||| +..++++ |+ +|+|+|+|+++++.|+++....++. +. |. . + ...
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 345999999 6777775 77 9999999999999999986432211 11 33 1 1 124
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEecCC-----Ccchh------------cc----cCchhHHhhcccCCCCCCCHHHHHH
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFISIP-----DERYN------------EF----RLSSDFMKEYIFPGGCLPSLSRITS 508 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~~~-----~~~~~------------~~----~~~~~fi~kYIFPGg~LPsl~~i~~ 508 (525)
+...+++++.++|||||++++...... ...+. .+ .....|+...+ ..+..+.+++.+
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t~~~~~~ 199 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGV--VKHHRTVGTTLN 199 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSC--CEEECCHHHHHH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCce--EEEeccHHHHHH
Confidence 688999999999999999999764210 00000 00 00011111100 112258999999
Q ss_pred HHHhcCCcEEEEEE
Q 043102 509 AMSAASRLWYNLAV 522 (525)
Q Consensus 509 ~~~~a~gl~V~~~~ 522 (525)
.++++ ||+++-..
T Consensus 200 ~l~~a-GF~~~~~~ 212 (243)
T 3bkw_A 200 ALIRS-GFAIEHVE 212 (243)
T ss_dssp HHHHT-TCEEEEEE
T ss_pred HHHHc-CCEeeeec
Confidence 99995 99987654
No 72
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.42 E-value=2.3e-07 Score=89.26 Aligned_cols=114 Identities=11% Similarity=0.114 Sum_probs=78.9
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-------------CCCC--Cc--------ccCc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-------------LERN--DR--------SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-------------l~d~--D~--------~vg~ 448 (525)
..+||||| +..++++...+|+|+|+|+++++.|+++++... +.+. |. |+..
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 173 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTD 173 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCH
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCH
Confidence 35999999 666776645689999999999999999875321 0111 33 3333
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
++...+++++.++|||||++++.+.......+. . .. .......+..++.+.++++ ||+++-..
T Consensus 174 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--------~-~~-~~~~~~~~~~~~~~~l~~a-Gf~~~~~~ 236 (254)
T 1xtp_A 174 ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL--------V-DK-EDSSLTRSDIHYKRLFNES-GVRVVKEA 236 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE--------E-ET-TTTEEEBCHHHHHHHHHHH-TCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCCCcccce--------e-cc-cCCcccCCHHHHHHHHHHC-CCEEEEee
Confidence 568899999999999999999987644332211 0 00 1122345889999999996 99887543
No 73
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.42 E-value=1.5e-07 Score=94.22 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=34.4
Q ss_pred cCCCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC
Q 043102 396 FKVREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD 438 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g 438 (525)
++..+||||| ++.+|+++ +++|+|||+|+++++.|+++++..+
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhh
Confidence 4556999999 77888875 6899999999999999999976544
No 74
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.41 E-value=2.9e-07 Score=91.66 Aligned_cols=116 Identities=19% Similarity=0.218 Sum_probs=77.5
Q ss_pred CCeehhhc------HHHHHHh--cCCEEEEEcCChHHHHHHHHHHHHc-CCCCC--------------C------c----
Q 043102 398 VREVIFLG------TIEVVKR--TGCKYTGITLAEKQLKYAGIKVKEA-DLERN--------------D------R---- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~--~G~~VtGIdlS~eql~~Ar~r~~~~-gl~d~--------------D------~---- 444 (525)
..+||||| +..++++ .+++|+|||+|++|++.|+++++.. +...+ + .
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 35999999 7788863 4899999999999999999998775 22221 2 1
Q ss_pred -----ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcc----cCCCCC--CCHHHHHHHHHhc
Q 043102 445 -----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYI----FPGGCL--PSLSRITSAMSAA 513 (525)
Q Consensus 445 -----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYI----FPGg~L--Psl~~i~~~~~~a 513 (525)
.+..-+...+++++.++|||||++++.....+. +..+......+.++. ..+.+. |....+...+++.
T Consensus 117 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~ 194 (299)
T 3g5t_A 117 ITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGYADPI--FPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDS 194 (299)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEEE--CTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTC
T ss_pred EeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEecCCcc--ccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhcc
Confidence 011117899999999999999999995554321 111112233444443 223334 6677777777774
Q ss_pred CCc
Q 043102 514 SRL 516 (525)
Q Consensus 514 ~gl 516 (525)
||
T Consensus 195 -gf 196 (299)
T 3g5t_A 195 -HL 196 (299)
T ss_dssp -CC
T ss_pred -CC
Confidence 77
No 75
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.41 E-value=2.6e-07 Score=88.82 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=79.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC-------CCC------------Cc--------
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL-------ERN------------DR-------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl-------~d~------------D~-------- 444 (525)
..+||||| +..+++. +.+|+|||+|+++++.|++++...++ .+. |.
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~ 135 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFH 135 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSST
T ss_pred CCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhh
Confidence 34899999 7788875 67999999999999999998732221 110 12
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchh-----cccCch----hHHhhcccCCCCCCCHHHHHHHHHhcCC
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYN-----EFRLSS----DFMKEYIFPGGCLPSLSRITSAMSAASR 515 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~-----~~~~~~----~fi~kYIFPGg~LPsl~~i~~~~~~a~g 515 (525)
++..++...+++++.++|||||++++.++...+..+. .+.... ..++.-..|+. .+.+++.+.+ .|
T Consensus 136 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---aG 210 (245)
T 3ggd_A 136 HIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGI--FTAEDIELYF---PD 210 (245)
T ss_dssp TSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCC--CCHHHHHHHC---TT
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCc--cCHHHHHHHh---CC
Confidence 3445578999999999999999998888766543221 001111 12222223332 4788888887 49
Q ss_pred cEEEEE
Q 043102 516 LWYNLA 521 (525)
Q Consensus 516 l~V~~~ 521 (525)
|++...
T Consensus 211 f~~~~~ 216 (245)
T 3ggd_A 211 FEILSQ 216 (245)
T ss_dssp EEEEEE
T ss_pred CEEEec
Confidence 998653
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.41 E-value=2.6e-07 Score=96.55 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=79.3
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc--------
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR-------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~-------- 444 (525)
..+||||| +..++++ |++|+|||+|++|++.|+++ ++... |.
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANTLC 182 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECChHH
Confidence 34999999 7777775 89999999999999999987 22111 33
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
|+ .+...+++++.++|||||+++++......- . ....|-.. ..+.....+..++.+.++++ ||++.-..
T Consensus 183 h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~-~----~~~~~~~~-~~~~~~~~s~~~l~~ll~~a-Gf~~~~~~ 251 (416)
T 4e2x_A 183 HI--PYVQSVLEGVDALLAPDGVFVFEDPYLGDI-V----AKTSFDQI-FDEHFFLFSATSVQGMAQRC-GFELVDVQ 251 (416)
T ss_dssp GC--TTHHHHHHHHHHHEEEEEEEEEEEECHHHH-H----HHTCGGGC-STTCCEECCHHHHHHHHHHT-TEEEEEEE
T ss_pred hc--CCHHHHHHHHHHHcCCCeEEEEEeCChHHh-h----hhcchhhh-hhhhhhcCCHHHHHHHHHHc-CCEEEEEE
Confidence 33 478999999999999999999976532210 0 01111111 12455668999999999995 99987543
No 77
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.40 E-value=5.6e-07 Score=89.18 Aligned_cols=114 Identities=14% Similarity=0.043 Sum_probs=75.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH-----------------c----------------
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE-----------------A---------------- 437 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~-----------------~---------------- 437 (525)
+..+||||| ++.+++..+.+|+|||+|++|++.|++++++ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 345999999 3334444578999999999999999986532 1
Q ss_pred -------CCCC-----------C--Cc--------ccC--cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCch
Q 043102 438 -------DLER-----------N--DR--------SFG--HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSS 487 (525)
Q Consensus 438 -------gl~d-----------~--D~--------~vg--~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~ 487 (525)
.+.. . |. ++. .+++..+++++.++|||||++++...... ..+.. .
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~-~~~~~---~- 225 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEE-SWYLA---G- 225 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESC-CEEEE---T-
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCc-ceEEc---C-
Confidence 1111 0 33 222 33688999999999999999999754322 11110 0
Q ss_pred hHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 488 DFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 488 ~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
...++ ....+.+++.+.++++ ||++...
T Consensus 226 ----~~~~~-~~~~~~~~l~~~l~~a-Gf~~~~~ 253 (289)
T 2g72_A 226 ----EARLT-VVPVSEEEVREALVRS-GYKVRDL 253 (289)
T ss_dssp ----TEEEE-CCCCCHHHHHHHHHHT-TEEEEEE
T ss_pred ----Ceeee-eccCCHHHHHHHHHHc-CCeEEEe
Confidence 00111 2456899999999995 9988654
No 78
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.40 E-value=1.5e-07 Score=90.94 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=77.9
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC------------CCC--Cc----cc--Ccc
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL------------ERN--DR----SF--GHE 449 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl------------~d~--D~----~v--g~~ 449 (525)
+..+||||| +..+++. |. +|+|+|+|+++++.|++++....+ .+. |. .+ ..+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 345999999 7777876 66 999999999999999998641111 011 33 10 135
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEecCCC-----cch--hcccCchhH-HhhcccC------------CCCCCCHHHHHHH
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFISIPD-----ERY--NEFRLSSDF-MKEYIFP------------GGCLPSLSRITSA 509 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~~~~-----~~~--~~~~~~~~f-i~kYIFP------------Gg~LPsl~~i~~~ 509 (525)
+...+++++.++|||||++++....... ..+ ........| ...|.-. ..+..+++++.+.
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 202 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQT 202 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHH
Confidence 7899999999999999999997542100 000 000000000 0011000 0122499999999
Q ss_pred HHhcCCcEEEEEE
Q 043102 510 MSAASRLWYNLAV 522 (525)
Q Consensus 510 ~~~a~gl~V~~~~ 522 (525)
++++ ||+++-..
T Consensus 203 l~~a-GF~~~~~~ 214 (253)
T 3g5l_A 203 LLKN-GFQINSVI 214 (253)
T ss_dssp HHHT-TEEEEEEE
T ss_pred HHHc-CCeeeeee
Confidence 9996 99998665
No 79
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.40 E-value=3.7e-07 Score=85.16 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=78.4
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------ccC
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~vg 447 (525)
..+||||| +..++.+.|++|+|+|+|+++++.|++++++.+.... |. |+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 103 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMR 103 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCC
Confidence 45999999 3444444699999999999999999999876442211 22 333
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhc---ccC-CCCCCCHHHHHHHHHhcCCcEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEY---IFP-GGCLPSLSRITSAMSAASRLWY 518 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kY---IFP-Gg~LPsl~~i~~~~~~a~gl~V 518 (525)
.++...+++++.++|||||++++...+.++..+..........-.+ ..| ...+.+.+++.+.++.. ||.+
T Consensus 104 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-g~~~ 177 (209)
T 2p8j_A 104 KNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDM-KVLF 177 (209)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTS-EEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhc-Ccee
Confidence 4678899999999999999999998877654432100000000000 011 11345777888877774 6544
No 80
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.40 E-value=3.6e-07 Score=92.47 Aligned_cols=121 Identities=14% Similarity=0.149 Sum_probs=86.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--------ccC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--------~vg 447 (525)
.+||||| +..+++++ +++|+++|+ +++++.|++++++.|+.++ |. +..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 247 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCC
Confidence 5999999 67777764 789999999 9999999999876554333 33 223
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+....+++++.++|||||++++.+...++..........++.. ....++...+.+++.+.++++ ||+++-..
T Consensus 248 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~ll~~a-Gf~~~~~~ 320 (334)
T 2ip2_A 248 EAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHL-FMACAGRHRTTEEVVDLLGRG-GFAVERIV 320 (334)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHH-HHHHSCCCCBHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHh-HhhCCCcCCCHHHHHHHHHHC-CCceeEEE
Confidence 34556999999999999999999988766532110011111111 123467778999999999996 99987654
No 81
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.39 E-value=4.5e-07 Score=89.87 Aligned_cols=124 Identities=19% Similarity=0.071 Sum_probs=82.4
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc----cc--C
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR----SF--G 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~----~v--g 447 (525)
+..+||||| ++.+++.+ +++|+|+|+|++|++.|+++++..+..-. |. .+ .
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFLLH 101 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCGGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChhhc
Confidence 345999999 77777764 58999999999999999999876553111 32 11 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCC---------CcchhcccCchhHHhh----cccCCCCCCCHHHHHHHHHhcC
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIP---------DERYNEFRLSSDFMKE----YIFPGGCLPSLSRITSAMSAAS 514 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~---------~~~~~~~~~~~~fi~k----YIFPGg~LPsl~~i~~~~~~a~ 514 (525)
..+.+.+++++.++|||||++++.+.... +...........|.+. ..-.|..+++..++.+.++++
T Consensus 102 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a- 180 (284)
T 3gu3_A 102 MTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSEL- 180 (284)
T ss_dssp CSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHT-
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHc-
Confidence 35788999999999999999999876511 0000000011112111 112355667778889899996
Q ss_pred CcEEEEE
Q 043102 515 RLWYNLA 521 (525)
Q Consensus 515 gl~V~~~ 521 (525)
||+.+-.
T Consensus 181 GF~~v~~ 187 (284)
T 3gu3_A 181 GVKNIEC 187 (284)
T ss_dssp TCEEEEE
T ss_pred CCCeEEE
Confidence 8987654
No 82
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.38 E-value=4.7e-07 Score=88.97 Aligned_cols=113 Identities=12% Similarity=0.019 Sum_probs=75.5
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcC-------------------------------
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEAD------------------------------- 438 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~g------------------------------- 438 (525)
++.+||||| ++.+++. |+ +|+|+|+|+.|++.|+++++...
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 334999999 4444443 66 69999999999999998764321
Q ss_pred ---------CC---------C-C-Cc--------ccC--cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchh
Q 043102 439 ---------LE---------R-N-DR--------SFG--HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSD 488 (525)
Q Consensus 439 ---------l~---------d-~-D~--------~vg--~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~ 488 (525)
+. . . |. |+. .+++...+++++++|||||++++..+.... .|.
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~-~~~------- 205 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP-SYM------- 205 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEE-------
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc-cce-------
Confidence 00 1 1 44 222 256678999999999999999998754322 111
Q ss_pred HHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 489 FMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 489 fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
.....|+. ...+.+++.++++++ ||++.-.
T Consensus 206 -~g~~~~~~-~~~~~~~l~~~l~~a-GF~i~~~ 235 (263)
T 2a14_A 206 -VGKREFSC-VALEKGEVEQAVLDA-GFDIEQL 235 (263)
T ss_dssp -ETTEEEEC-CCCCHHHHHHHHHHT-TEEEEEE
T ss_pred -eCCeEeec-cccCHHHHHHHHHHC-CCEEEEE
Confidence 01122332 234889999999995 9988654
No 83
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=1e-07 Score=93.25 Aligned_cols=112 Identities=17% Similarity=0.151 Sum_probs=76.2
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH----cC-----CCCC--Cc----c-c-CcccHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE----AD-----LERN--DR----S-F-GHEYMEE 453 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~----~g-----l~d~--D~----~-v-g~~~~~~ 453 (525)
+..+||||| +..+++ .+++|+|+|+|++|++.|+++..- .. +.+. |. + + ..+++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 112 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEK 112 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHH
Confidence 345999999 777887 599999999999999998877410 01 1111 44 1 1 1368899
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccC------CCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFP------GGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFP------Gg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
+++++.++|| ||++++.+...... ...|... .+| +..+++..++. .++++ ||+++-
T Consensus 113 ~l~~~~~~Lk-gG~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~l~~a-GF~~v~ 174 (261)
T 3ege_A 113 SFQEMQRIIR-DGTIVLLTFDIRLA-------QRIWLYD-YFPFLWEDALRFLPLDEQIN-LLQEN-TKRRVE 174 (261)
T ss_dssp HHHHHHHHBC-SSCEEEEEECGGGC-------CCCGGGG-TCHHHHHHHHTSCCHHHHHH-HHHHH-HCSEEE
T ss_pred HHHHHHHHhC-CcEEEEEEcCCchh-------HHHHHHH-HHHHHhhhhhhhCCCHHHHH-HHHHc-CCCcee
Confidence 9999999999 99999888753221 1112211 111 24678888888 88886 896554
No 84
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.37 E-value=1.3e-07 Score=101.83 Aligned_cols=109 Identities=19% Similarity=0.221 Sum_probs=77.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------c
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR--------S 445 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~--------~ 445 (525)
+..+||||| ++.+|+...++|+|||+|+ |++.|++++++.|+.++ |. +
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYM 236 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchHh
Confidence 445999999 7777875346999999998 99999999999888654 22 1
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEEEecC-----CC-cch-hcccCchhHHhhcccCCCCCCCHHHHH
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQFISI-----PD-ERY-NEFRLSSDFMKEYIFPGGCLPSLSRIT 507 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq~i~~-----~~-~~~-~~~~~~~~fi~kYIFPGg~LPsl~~i~ 507 (525)
+..+.....+..+.++|||||++++..... .+ ..+ +.+ ...+|..+.+|||+.+|++.++.
T Consensus 237 ~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~-~~~~~w~~~~~~g~dl~~l~~~~ 304 (480)
T 3b3j_A 237 LFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQF-TKANFWYQPSFHGVDLSALRGAA 304 (480)
T ss_dssp HTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHH-HHHHHHHSSCBTTBCCGGGHHHH
T ss_pred cCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHh-hccCccccccCCCcChhhhhhHH
Confidence 223556677888999999999998644221 11 111 111 12345555699999999998875
No 85
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.36 E-value=1.5e-06 Score=82.47 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=67.1
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+..+||||| ++.+|+.. +++|+|+|+|+++++.|++++++.|+.++ |.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 345999999 78888763 68999999999999999999999998764 22
Q ss_pred ---ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
.....++..+++.+.++|||||+++++.+..+.
T Consensus 144 v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 179 (225)
T 3tr6_A 144 IYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRG 179 (225)
T ss_dssp EEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGG
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCC
Confidence 112457899999999999999999999876554
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.36 E-value=1.9e-07 Score=89.96 Aligned_cols=75 Identities=31% Similarity=0.515 Sum_probs=60.2
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc---------ccCc
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR---------SFGH 448 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~---------~vg~ 448 (525)
.+||||| ++.++++ |++|+|+|+|+++++.|+++++..++... |. +...
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~ 121 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFDE 121 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGGGSCH
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchhcCCH
Confidence 4999999 7778875 99999999999999999999987664322 22 1123
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
++...+++++.++|||||++++....
T Consensus 122 ~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 122 EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 46789999999999999999987543
No 87
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.35 E-value=1.4e-06 Score=85.82 Aligned_cols=121 Identities=13% Similarity=0.108 Sum_probs=79.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-----CC-----CC-Cc-----ccC-cccHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-----LE-----RN-DR-----SFG-HEYMEEF 454 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-----l~-----d~-D~-----~vg-~~~~~~~ 454 (525)
..+||||| +..+++ .+++|+|+|+|++|++.|+++..... .. .. |. .+. ..+...+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~d~~~~ 136 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAMLHWVKEPEAA 136 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESCGGGCSCHHHH
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcchhhhCcCHHHH
Confidence 35999999 677777 69999999999999999998852211 00 01 33 111 2578899
Q ss_pred HHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcc-----cC-CCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 455 FGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYI-----FP-GGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 455 f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYI-----FP-Gg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
++++.++|||||++++......... .........+.++- ++ ...+++..++.+.++++ ||++...
T Consensus 137 l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~~~~~ 207 (279)
T 3ccf_A 137 IASIHQALKSGGRFVAEFGGKGNIK-YILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQ-GFDVTYA 207 (279)
T ss_dssp HHHHHHHEEEEEEEEEEEECTTTTH-HHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHH-TEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEecCCcchH-HHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHc-CCEEEEE
Confidence 9999999999999999776533210 00000111122211 11 12567999999999996 9998653
No 88
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.35 E-value=2e-06 Score=85.45 Aligned_cols=114 Identities=16% Similarity=0.214 Sum_probs=76.1
Q ss_pred Ceehhhc------HH----HHHHh-cCCEE--EEEcCChHHHHHHHHHHHHc-CCC-----------------------C
Q 043102 399 REVIFLG------TI----EVVKR-TGCKY--TGITLAEKQLKYAGIKVKEA-DLE-----------------------R 441 (525)
Q Consensus 399 ~rVLDIG------a~----~lA~~-~G~~V--tGIdlS~eql~~Ar~r~~~~-gl~-----------------------d 441 (525)
.+||||| +. .++.+ .++.| +|||+|++|++.|++++++. ++. +
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKEL 133 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCC
Confidence 3999999 22 22333 35655 99999999999999998653 221 1
Q ss_pred C--Cc----cc--CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcc--cCC---CCCCCHHHHHH
Q 043102 442 N--DR----SF--GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYI--FPG---GCLPSLSRITS 508 (525)
Q Consensus 442 ~--D~----~v--g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYI--FPG---g~LPsl~~i~~ 508 (525)
. |. ++ ..++....+++++++|||||++++...... ..+ ..+...|. +|. ...++..++.+
T Consensus 134 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (292)
T 2aot_A 134 QKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS-SGW------DKLWKKYGSRFPQDDLCQYITSDDLTQ 206 (292)
T ss_dssp CCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT-SHH------HHHHHHHGGGSCCCTTCCCCCHHHHHH
T ss_pred CceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC-ccH------HHHHHHHHHhccCCCcccCCCHHHHHH
Confidence 1 33 11 135789999999999999999999865422 211 11222221 232 35678999999
Q ss_pred HHHhcCCcEEEE
Q 043102 509 AMSAASRLWYNL 520 (525)
Q Consensus 509 ~~~~a~gl~V~~ 520 (525)
.++++ ||++..
T Consensus 207 ~l~~a-Gf~~~~ 217 (292)
T 2aot_A 207 MLDNL-GLKYEC 217 (292)
T ss_dssp HHHHH-TCCEEE
T ss_pred HHHHC-CCceEE
Confidence 99996 998765
No 89
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.33 E-value=5e-07 Score=88.28 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=67.6
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+..+||||| ++.+|+.. +++|+|||+|+++++.|+++++..|+.++ |+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 345999999 78888753 78999999999999999999999998765 32
Q ss_pred ---ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
.....++..+++++.++|||||+++++.+....
T Consensus 140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 140 IFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 112467899999999999999999999887654
No 90
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.33 E-value=2.5e-07 Score=90.05 Aligned_cols=78 Identities=12% Similarity=0.168 Sum_probs=58.3
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-----CCC-----C-Cc---------ccC-cccH
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-----LER-----N-DR---------SFG-HEYM 451 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-----l~d-----~-D~---------~vg-~~~~ 451 (525)
.+||||| +..++++ +++|+|||+|+++++.|++++.... +.+ . |. |+. .++.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~ 130 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAEL 130 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHH
T ss_pred CcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHH
Confidence 5999999 6677765 8899999999999999999864211 111 1 33 121 2467
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
..+++++.++|||||++++.....++
T Consensus 131 ~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 131 DAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp HHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHhcCCCcEEEEEeccChh
Confidence 78999999999999999997654443
No 91
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.32 E-value=1.1e-06 Score=83.61 Aligned_cols=73 Identities=19% Similarity=0.339 Sum_probs=57.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc---------cc-C
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR---------SF-G 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~---------~v-g 447 (525)
.+||||| +..+++. ++|+|+|+|+++++.|+++++..+.... |. |+ .
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYLQT 112 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGCCS
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhcCC
Confidence 5999999 6667765 8999999999999999999876552211 22 11 2
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
.++...+++++.++|||||++++...
T Consensus 113 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 113 EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 25678899999999999999998653
No 92
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.31 E-value=1.6e-07 Score=90.35 Aligned_cols=117 Identities=10% Similarity=-0.007 Sum_probs=73.2
Q ss_pred cccCchhHHHHhhhcccccchHHHHhcccccc--------chhccc--cCCCeehhhc------HHHHHHhcCCEEEEEc
Q 043102 358 SRTNTLTQACRHISRHYDLSNELFCLFLDESL--------TYSCAL--FKVREVIFLG------TIEVVKRTGCKYTGIT 421 (525)
Q Consensus 358 ~~~N~~~~s~~nIa~hYDl~nd~y~l~Ld~~m--------~ys~a~--f~~~rVLDIG------a~~lA~~~G~~VtGId 421 (525)
...|.....+...+..||..+..+...-...| ...... -+..+||||| +..+++....+|+|||
T Consensus 11 ~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD 90 (236)
T 1zx0_A 11 APGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIE 90 (236)
T ss_dssp CTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEE
T ss_pred CCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEc
Confidence 34466677777777788854442211111111 111111 1234999999 6677664344999999
Q ss_pred CChHHHHHHHHHHHHcCC----------------CCC--Cc--c------c---CcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 422 LAEKQLKYAGIKVKEADL----------------ERN--DR--S------F---GHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 422 lS~eql~~Ar~r~~~~gl----------------~d~--D~--~------v---g~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
+|++|++.|+++++..+. .+. |. . + ....++.+++++.++|||||++++.+
T Consensus 91 ~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 91 CNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999999999866442 111 33 1 1 12234578999999999999998765
Q ss_pred ec
Q 043102 473 IS 474 (525)
Q Consensus 473 i~ 474 (525)
..
T Consensus 171 ~~ 172 (236)
T 1zx0_A 171 LT 172 (236)
T ss_dssp HH
T ss_pred cC
Confidence 43
No 93
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.28 E-value=2.2e-06 Score=79.37 Aligned_cols=79 Identities=9% Similarity=0.074 Sum_probs=61.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc-------
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR------- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~------- 444 (525)
+..+|||+| ++.++++...+|+|||+|+++++.|+++++..++..- |.
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 345999999 6667765345899999999999999999988876211 22
Q ss_pred ccCcccHHHHHHHHHh--ccCCCcEEEEEEecC
Q 043102 445 SFGHEYMEEFFGCCES--LIAKDGLFVLQFISI 475 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r--~LkpGG~~viq~i~~ 475 (525)
+...+++...++.+.+ +|||||+++++....
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 1112568899999999 999999999987654
No 94
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.27 E-value=9.3e-07 Score=85.23 Aligned_cols=81 Identities=16% Similarity=0.309 Sum_probs=66.7
Q ss_pred CCCeehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc-----------------cc
Q 043102 397 KVREVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN------DR-----------------SF 446 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~-----------------~v 446 (525)
+..+||||| ++.+|+. .+++|+|||+|+++++.|++++++.|+.++ |. ..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 345999999 7788874 378999999999999999999999988654 22 11
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
....+..+++.+.++|||||+++++.+....
T Consensus 151 ~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g 181 (232)
T 3ntv_A 151 AKAQSKKFFEIYTPLLKHQGLVITDNVLYHG 181 (232)
T ss_dssp TSSSHHHHHHHHGGGEEEEEEEEEECTTGGG
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEEeeCCcCc
Confidence 2567899999999999999999998876543
No 95
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.27 E-value=8.6e-07 Score=85.46 Aligned_cols=122 Identities=18% Similarity=0.124 Sum_probs=78.6
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHc-----C---CC-CC--Cc----c-c-CcccHHH
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEA-----D---LE-RN--DR----S-F-GHEYMEE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~-----g---l~-d~--D~----~-v-g~~~~~~ 453 (525)
..+||||| +..++++. +++|+|+|+|++|++.|+++.... . +. +. |. . + ...+...
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~ 113 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVPDHLA 113 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGSTTHHH
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCCCHHH
Confidence 35999999 66777654 789999999999999999883211 0 11 00 33 1 1 1257899
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchh----cccCchhHHhhc--c-cCCCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYN----EFRLSSDFMKEY--I-FPGGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~----~~~~~~~fi~kY--I-FPGg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
+++++.++|||||++++........... .......|.... + -++..+++..++.+.++++ ||+|..
T Consensus 114 ~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-Gf~v~~ 186 (259)
T 2p35_A 114 VLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPK-SSRVDV 186 (259)
T ss_dssp HHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGG-EEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhc-CCceEE
Confidence 9999999999999999987643322111 000001122211 0 1134678999999999996 998654
No 96
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.24 E-value=3.7e-07 Score=90.50 Aligned_cols=76 Identities=11% Similarity=0.143 Sum_probs=56.4
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHH---------HcCCCCC--Cc-----ccCcccHHHHHH
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVK---------EADLERN--DR-----SFGHEYMEEFFG 456 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~---------~~gl~d~--D~-----~vg~~~~~~~f~ 456 (525)
.+||||| +..++++ +.+|+|||+|++|++.|+++.. +..+.+. |. .+..-+.+.+++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~ 119 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFWA 119 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHHH
Confidence 4999999 7788874 8999999999999999876421 0111111 33 223346789999
Q ss_pred HHHhccCCCcEEEEEEecC
Q 043102 457 CCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 457 ~i~r~LkpGG~~viq~i~~ 475 (525)
++.|+|||||++++.....
T Consensus 120 e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 120 ELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHEEEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEEEECCC
Confidence 9999999999999876544
No 97
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.24 E-value=2e-06 Score=83.46 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=66.0
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
...+||||| ++.+|+.. +++|+++|+|+++++.|++++++.|+.++ |+
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 345999999 77888763 78999999999999999999999888654 22
Q ss_pred ----ccCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 445 ----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 445 ----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.....++..+++.+.++|||||+++++.+...
T Consensus 150 ~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 150 FGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp EEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred EEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 11245789999999999999999999887654
No 98
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.23 E-value=9.1e-07 Score=83.40 Aligned_cols=80 Identities=11% Similarity=0.059 Sum_probs=65.0
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc---------------ccC
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR---------------SFG 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~---------------~vg 447 (525)
...+||||| ++.+++.. +++|+++|+|+++++.|+++++..++.++ |. ...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 135 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDCD 135 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEETT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcCC
Confidence 345999999 77888763 78999999999999999999988877543 22 112
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
..++..+++++.++|||||+++++.+...
T Consensus 136 ~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 136 VFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp TSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred hhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 56789999999999999999999876554
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.23 E-value=1.8e-06 Score=78.28 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=59.7
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc--ccCcccH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR--SFGHEYM 451 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~--~vg~~~~ 451 (525)
.+||||| ++.+++.. +++|+|+|+|+++++.|++++++.|+.++ |. ..+.-..
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH
Confidence 4999999 77778764 78999999999999999999988877622 22 0011112
Q ss_pred HHHHHHHHhccCCCcEEEEEEec
Q 043102 452 EEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+++++.++|||||++++..+.
T Consensus 107 ~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 107 PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp TTHHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHHHhcCCCCEEEEEeec
Confidence 78999999999999999998764
No 100
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.23 E-value=1.3e-06 Score=85.47 Aligned_cols=81 Identities=7% Similarity=0.110 Sum_probs=66.2
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
...+||||| ++.+|+.. +++|++||+|+++++.|++++++.|+.++ |+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 345999999 77888763 78999999999999999999998887543 22
Q ss_pred ----ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
.....++..+++.+.++|||||+++++.+....
T Consensus 159 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 195 (247)
T 1sui_A 159 FIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNG 195 (247)
T ss_dssp EEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGG
T ss_pred EEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCC
Confidence 112467899999999999999999998876543
No 101
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.23 E-value=1.6e-06 Score=85.44 Aligned_cols=78 Identities=13% Similarity=0.119 Sum_probs=63.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccC
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFG 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg 447 (525)
+..+||||| +..++++ |++|+|+|+|+++++.|+++++..++... |. |+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhCC
Confidence 445999999 7788876 99999999999999999999988775211 22 445
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
.+....+++++.++|||||++++.....
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 6778899999999999999988865543
No 102
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.22 E-value=4.1e-06 Score=86.28 Aligned_cols=121 Identities=12% Similarity=0.049 Sum_probs=84.8
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc----c----cC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR----S----FG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~----~----vg 447 (525)
.+||||| ++.+++++ +.+++..|+ +++++.|+++++..+ .++ |. + ..
T Consensus 181 ~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~ 258 (353)
T 4a6d_A 181 PLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLPEADLYILARVLHDWA 258 (353)
T ss_dssp SEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCCCCSEEEEESSGGGSC
T ss_pred CeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCCCceEEEeeeecccCC
Confidence 3899999 77888774 789999998 789999999876443 333 22 1 23
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.++-...++++++.|||||+++|.+...++..........--+.-....+|.-.+.+|+.+.++++ ||+++-..
T Consensus 259 d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~A-Gf~~v~v~ 332 (353)
T 4a6d_A 259 DGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSA-GFRDFQFK 332 (353)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH-TCEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHC-CCceEEEE
Confidence 344568899999999999999999887765431110001111222234578888999999999996 99987654
No 103
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.22 E-value=4.8e-07 Score=88.28 Aligned_cols=115 Identities=9% Similarity=0.115 Sum_probs=72.7
Q ss_pred Ceehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcC--------------CCC--CCc---ccCcccHH
Q 043102 399 REVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEAD--------------LER--NDR---SFGHEYME 452 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~g--------------l~d--~D~---~vg~~~~~ 452 (525)
.+||||| +..++++ |+ +|+|||+|++|++.|+++..... +.. .|. .+-...+.
T Consensus 39 ~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l~ 117 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISLD 117 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCGG
T ss_pred CEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhHH
Confidence 4899999 7778876 75 99999999999999888643211 110 011 11123357
Q ss_pred HHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhh-ccc--CCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKE-YIF--PGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~k-YIF--PGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+++++.++|||||++++-. .+.|+. ....+.+ -++ |..+..++.++.+.++++ ||++.-..
T Consensus 118 ~~l~~i~rvLkpgG~lv~~~----~p~~e~---~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~a-Gf~v~~~~ 182 (232)
T 3opn_A 118 LILPPLYEILEKNGEVAALI----KPQFEA---GREQVGKNGIIRDPKVHQMTIEKVLKTATQL-GFSVKGLT 182 (232)
T ss_dssp GTHHHHHHHSCTTCEEEEEE----CHHHHS---CHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH-TEEEEEEE
T ss_pred HHHHHHHHhccCCCEEEEEE----Cccccc---CHHHhCcCCeecCcchhHHHHHHHHHHHHHC-CCEEEEEE
Confidence 89999999999999999832 222321 1111111 010 001112677899899886 99987654
No 104
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.21 E-value=2.2e-06 Score=84.17 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=74.1
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc---ccCcccHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR---SFGHEYMEE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~---~vg~~~~~~ 453 (525)
..+|||+| ++.+++ .|++|+|+|+|+++++.|+++++..++... |. .........
T Consensus 121 ~~~VLDiGcG~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~~~~~ 199 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAELHAA 199 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHHHHHH
Confidence 35999999 677776 488999999999999999999988776421 22 112345778
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
+++.+.++|||||++++..+... ...++.+.++++ ||++.-.
T Consensus 200 ~l~~~~~~LkpgG~lils~~~~~-------------------------~~~~v~~~l~~~-Gf~~~~~ 241 (254)
T 2nxc_A 200 LAPRYREALVPGGRALLTGILKD-------------------------RAPLVREAMAGA-GFRPLEE 241 (254)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEGG-------------------------GHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeeccC-------------------------CHHHHHHHHHHC-CCEEEEE
Confidence 99999999999999999765321 256777788885 8988654
No 105
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.21 E-value=2.3e-06 Score=80.69 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=59.2
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc----c---c-C
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR----S---F-G 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~----~---v-g 447 (525)
..+||||| +..+++. +.+|+|+|+|+++++.|+++++..+.... |. . . .
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 34999999 6677765 77999999999999999999876541111 22 1 1 2
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
..+...+++++.++|||||++++.....
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 3467889999999999999999987653
No 106
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.21 E-value=1.3e-06 Score=85.15 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=75.2
Q ss_pred cCchhHHHHhhhcccccchHH--HHhccccccchhcccc-CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHH
Q 043102 360 TNTLTQACRHISRHYDLSNEL--FCLFLDESLTYSCALF-KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYA 430 (525)
Q Consensus 360 ~N~~~~s~~nIa~hYDl~nd~--y~l~Ld~~m~ys~a~f-~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~A 430 (525)
.+++...++.++..||...+. +.............+. +..+||||| +..+++. |++|+|+|+|+++++.|
T Consensus 14 ~~~~~~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a 92 (260)
T 2avn_A 14 KLRSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVA 92 (260)
T ss_dssp ECCHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHH
T ss_pred hhhhcchhhHHHHHHHHhccccchhHHHHHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHH
Confidence 467788888999999875421 1100010001111111 345999999 6777775 89999999999999999
Q ss_pred HHHHHH----cC-----CCCC--Cc--ccC-----cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 431 GIKVKE----AD-----LERN--DR--SFG-----HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 431 r~r~~~----~g-----l~d~--D~--~vg-----~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+++... .. +.+. |. ..+ ..+...+++++.++|||||++++....
T Consensus 93 ~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 93 REKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 998641 00 1111 33 111 145789999999999999999998764
No 107
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.20 E-value=1.6e-05 Score=82.93 Aligned_cols=145 Identities=15% Similarity=0.206 Sum_probs=90.0
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc-----eeEeccCCCCCCCCCC-------------
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRTGGAFH-----DIFLHCDKNSMPQNPA------------- 173 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~~~------------- 173 (525)
+|.|.+.+|++..+|+||+|+++.++.+||.+ +. ..+.|..+. .+.+.-|....+....
T Consensus 265 ~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~-~~--~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~ 341 (470)
T 3i6d_A 265 CYSLELDNGVTLDADSVIVTAPHKAAAGMLSE-LP--AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFA 341 (470)
T ss_dssp SEEEEESSSCEEEESEEEECSCHHHHHHHTTT-ST--THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCS
T ss_pred eEEEEECCCCEEECCEEEECCCHHHHHHHcCC-ch--hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCC
Confidence 68899999988899999999999999999974 42 345566665 6666667655533210
Q ss_pred ----Cccc--cccccCCCCCCCCCCCCCeE-EEc----------------------------CCCCCCcc-eeeEEEecC
Q 043102 174 ----AWSA--WSFLGSLDSKNLGETSLPYL-VTL----------------------------NPDHAPEH-TLLKWSTGP 217 (525)
Q Consensus 174 ----aWas--wNy~~~~~~~nl~~~~~~~f-vTL----------------------------Np~~~p~~-il~~~~y~H 217 (525)
.|.+ |+... + .+..++ ++. ....+|.. ...+|.+.-
T Consensus 342 ~~~~~~~s~~~~~~~-------p-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~ 413 (470)
T 3i6d_A 342 ITACTWTNKKWPHAA-------P-EGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESM 413 (470)
T ss_dssp EEEEEEHHHHCGGGS-------C-TTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEE
T ss_pred ceEEEEEcCcCCCcC-------C-CCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCcc
Confidence 1221 11111 0 011111 111 11111222 566898888
Q ss_pred CCCCHHHHHHHHHhhh-h-cCCCCeEEeccCCCCCCchhhhchHHHHHhhhc
Q 043102 218 PVPFVAASKASLELGH-I-QGRRGIWFRGAYQGYGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 218 Pv~~~~a~~aq~~l~~-i-qG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~ll 267 (525)
|.+++........+.. + +...+++|||+|+...-.|+|+.||.++|+.++
T Consensus 414 p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~aA~~i~ 465 (470)
T 3i6d_A 414 PQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDAL 465 (470)
T ss_dssp EECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHH
Confidence 8887776543222222 2 223579999998765569999999999999985
No 108
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.17 E-value=1.7e-05 Score=83.26 Aligned_cols=150 Identities=14% Similarity=0.055 Sum_probs=92.4
Q ss_pred EEEEeCCCceEeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc-----eeEeccCCCCCCCCCCCccccccccCCCCC
Q 043102 113 CTVVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRTGGAFH-----DIFLHCDKNSMPQNPAAWSAWSFLGSLDSK 187 (525)
Q Consensus 113 v~v~~~~g~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~~~aWaswNy~~~~~~~ 187 (525)
+.|.+. |++..+|+||+|+++.++.+||.+ ..+...+.|..+. .+.+.-|...+|.. .|.|+......
T Consensus 268 ~~v~~~-~~~~~ad~vv~a~p~~~~~~ll~~-~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-----~~g~l~~~~~~ 340 (477)
T 3nks_A 268 WKVSLR-DSSLEADHVISAIPASVLSELLPA-EAAPLARALSAITAVSVAVVNLQYQGAHLPVQ-----GFGHLVPSSED 340 (477)
T ss_dssp EEEECS-SCEEEESEEEECSCHHHHHHHSCG-GGHHHHHHHHTCCEEEEEEEEEEETTCCCSSC-----SSEEECCTTTC
T ss_pred EEEEEC-CeEEEcCEEEECCCHHHHHHhccc-cCHHHHHHHhcCCCCcEEEEEEEECCCCCCCC-----CceEEccCCCC
Confidence 677664 447889999999999999999974 5566777888887 55666666655421 11222211100
Q ss_pred -----------CCCC----CCCCeE-EEc--------------------------------CCCCCCcc-eeeEEEecCC
Q 043102 188 -----------NLGE----TSLPYL-VTL--------------------------------NPDHAPEH-TLLKWSTGPP 218 (525)
Q Consensus 188 -----------nl~~----~~~~~f-vTL--------------------------------Np~~~p~~-il~~~~y~HP 218 (525)
..+. .+..++ +++ ....+|.. .+.+|.+.-|
T Consensus 341 ~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p 420 (477)
T 3nks_A 341 PGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIP 420 (477)
T ss_dssp SSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEE
T ss_pred CCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccC
Confidence 0000 011111 111 11111222 4568999999
Q ss_pred CCCHHHHHHHHHhhh-hc-CCCCeEEeccCCCCCCchhhhchHHHHHhhhcCC
Q 043102 219 VPFVAASKASLELGH-IQ-GRRGIWFRGAYQGYGFHEDGLKDLSINSCMTYGE 269 (525)
Q Consensus 219 v~~~~a~~aq~~l~~-iq-G~~~~~fcGay~g~GfHEdg~~Sgl~aA~~llG~ 269 (525)
.|++.......++.. +. -..++++||+|+...--|+++.||.++|+.+++.
T Consensus 421 ~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 421 QYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp CCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 998876554333332 22 1457999999874444699999999999999764
No 109
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.17 E-value=3.1e-06 Score=77.19 Aligned_cols=100 Identities=17% Similarity=0.110 Sum_probs=73.1
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC----------CCCC--Cc---------ccCccc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD----------LERN--DR---------SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g----------l~d~--D~---------~vg~~~ 450 (525)
..+||||| +..+++. +++|+|+|+|+++++.|+++..... +.+. |. ++..++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~ 125 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDG 125 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHH
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHH
Confidence 34999999 6677775 8999999999999999999864311 1111 33 222356
Q ss_pred HHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
...+++++.++|||||++++...... -.+..++.+.++++ ||++.-..
T Consensus 126 ~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~l~~~-Gf~~~~~~ 173 (195)
T 3cgg_A 126 REPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEVAERV-GLELENAF 173 (195)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHHHHHH-TEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHHHHHc-CCEEeeee
Confidence 68999999999999999998643211 14678888888885 88876543
No 110
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.16 E-value=2.5e-06 Score=77.74 Aligned_cols=77 Identities=17% Similarity=0.256 Sum_probs=62.8
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC-C------C-----------c-------cc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER-N------D-----------R-------SF 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d-~------D-----------~-------~v 446 (525)
..+||||| +..+++. +++|+|+|+|+++++.|+++++..++.+ + | . +.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRA 131 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCSTT
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCccc
Confidence 45999999 6777776 9999999999999999999998887764 1 2 1 11
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
+......+++++.++|||||++++.....
T Consensus 132 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 132 GKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred chhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 24567899999999999999999987653
No 111
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.16 E-value=2.6e-06 Score=87.15 Aligned_cols=120 Identities=17% Similarity=0.235 Sum_probs=80.7
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccCc
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFGH 448 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg~ 448 (525)
.+||||| +..+++++ +.+++++|++ +++. ++++++.++.++ |. +...
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d 262 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGD 262 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCH
T ss_pred ceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCH
Confidence 3999999 77788764 6799999995 4444 444433344332 33 2334
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEEe
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAVS 523 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~~ 523 (525)
++...++++++++|||||+++|.+...++..........++. ....+++...+.+++.+.++++ ||+++-...
T Consensus 263 ~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~-~~~~~~~~~~t~~e~~~ll~~a-Gf~~~~~~~ 335 (348)
T 3lst_A 263 EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFM-MLAARTGQERTAAELEPLFTAA-GLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHH-HHHTTSCCCCBHHHHHHHHHHT-TEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChh-hhhcCCCcCCCHHHHHHHHHHC-CCceEEEEE
Confidence 445799999999999999999998877654211111111111 1224678889999999999995 999876553
No 112
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.16 E-value=3e-06 Score=80.71 Aligned_cols=80 Identities=13% Similarity=0.221 Sum_probs=61.4
Q ss_pred CCCeehhhc------HHHHHHh--cCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKR--TGCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~--~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
+..+||||| ++.+|+. .+++|+|||+|+++++.|+++++..|+.++ |.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 345999999 7888875 378999999999999999999998887643 21
Q ss_pred ---ccCcccHH---HHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---SFGHEYME---EFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~vg~~~~~---~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
......+. .+++.+ ++|||||+++++.+..+.
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc
Confidence 11133444 456666 999999999998887543
No 113
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.15 E-value=2e-06 Score=79.75 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=59.8
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C-------------c---ccC
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------D-------------R---SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D-------------~---~vg 447 (525)
+.+|||+| ++.++++. +++|+|+|+|+++++.|++++++.|+..+ | . ..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 34999999 77788764 47999999999999999999998777333 2 1 000
Q ss_pred ------------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 448 ------------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 448 ------------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
.+....+++++.++|||||++++....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 123467999999999999999987654
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.14 E-value=3.6e-06 Score=80.26 Aligned_cols=75 Identities=23% Similarity=0.298 Sum_probs=59.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc-----------------ccCc
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----DR-----------------SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~-----------------~vg~ 448 (525)
.++||||| ++.+|+.. +++|+|||+|+++++.|++++++.|+..- |. +...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~ 118 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD 118 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC
Confidence 35999999 77788764 78999999999999999999988876421 22 1110
Q ss_pred c-----------cHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 E-----------YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~-----------~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
. ..+.+++++.++|||||++++.+
T Consensus 119 p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 119 PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 0 14789999999999999999875
No 115
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.14 E-value=1.4e-06 Score=82.74 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-----CCC-----C-Cc---------ccC-ccc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-----LER-----N-DR---------SFG-HEY 450 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-----l~d-----~-D~---------~vg-~~~ 450 (525)
..+||||| +..++++ +.+|+|+|+|+++++.|+++..... +.+ . |. |+. .++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~ 119 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTEE 119 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHHH
T ss_pred CCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHHH
Confidence 35999999 6777775 6699999999999999998853211 110 1 33 121 256
Q ss_pred HHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
...+++++.++|||||++++.....++
T Consensus 120 ~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 120 LGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp HHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 789999999999999999998765543
No 116
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.14 E-value=1.8e-06 Score=86.58 Aligned_cols=123 Identities=12% Similarity=0.031 Sum_probs=80.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC--------------------------CCC---C
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD--------------------------LER---N 442 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g--------------------------l~d---~ 442 (525)
..+||||| +..+++..+++|+|+|+|+++++.|+++....+ +.+ .
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 34999999 677776557899999999999999999976421 110 1
Q ss_pred -Cc--------cc--CcccHHHHHHHHHhccCCCcEEEEEEecCCCc----------c---------hhcccCchhHHhh
Q 043102 443 -DR--------SF--GHEYMEEFFGCCESLIAKDGLFVLQFISIPDE----------R---------YNEFRLSSDFMKE 492 (525)
Q Consensus 443 -D~--------~v--g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~----------~---------~~~~~~~~~fi~k 492 (525)
|. ++ ..++...+++++.++|||||++++.+....+- . |........+..+
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 194 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCK 194 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccce
Confidence 33 11 22456799999999999999999977642100 0 1100111223344
Q ss_pred cccCC-------CCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 493 YIFPG-------GCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 493 YIFPG-------g~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
|.|.- .++.+..++.+.+++. ||+++..
T Consensus 195 ~~f~l~~~~~~~~~~~~~~~~~~l~~~~-G~~~v~~ 229 (313)
T 3bgv_A 195 YDFNLEGVVDVPEFLVYFPLLNEMAKKY-NMKLVYK 229 (313)
T ss_dssp EEEEEC---CCEEECCCHHHHHHHGGGG-TEEEEEE
T ss_pred EEEEECCcccCcceEEcHHHHHHHHHHc-CcEEEEe
Confidence 44421 2345778888888885 9998764
No 117
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.13 E-value=3e-06 Score=81.54 Aligned_cols=76 Identities=16% Similarity=0.168 Sum_probs=58.7
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc------------------ccC
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----DR------------------SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~------------------~vg 447 (525)
.++||||| ++.+|++. +++|+|||+|+++++.|++++++.|+.+- |+ ...
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 35999999 77788763 68999999999999999999998887532 22 100
Q ss_pred -----ccc------HHHHHHHHHhccCCCcEEEEEEe
Q 043102 448 -----HEY------MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 448 -----~~~------~~~~f~~i~r~LkpGG~~viq~i 473 (525)
.++ .+.+++++.++|||||++++.+.
T Consensus 115 ~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 115 DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 111 13699999999999999998763
No 118
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.13 E-value=3.7e-06 Score=82.90 Aligned_cols=75 Identities=20% Similarity=0.246 Sum_probs=57.6
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC----------------------CCC--Cc---
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL----------------------ERN--DR--- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl----------------------~d~--D~--- 444 (525)
..+||||| ++.++++ |++|+|+|+|++|++.|++++.+.+. .+. |.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 35999999 7788875 89999999999999999988643221 111 33
Q ss_pred ------ccCc-----ccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 ------SFGH-----EYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 ------~vg~-----~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
|+.. +.+..+++++.++|||||++++...
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1211 3388999999999999999999764
No 119
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.13 E-value=3e-06 Score=81.13 Aligned_cols=80 Identities=18% Similarity=0.272 Sum_probs=64.3
Q ss_pred CCCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------c
Q 043102 397 KVREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------S 445 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------~ 445 (525)
+..+||||| ++.+|+.. +++|+|+|+|+++++.|+++++..|+.++ |. .
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 345999999 77788765 78999999999999999999998887543 22 1
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
....++..+++.+.++|||||++++.++...
T Consensus 134 ~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 134 AAKGQYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp GGGSCHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 1245688999999999999999999866543
No 120
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.13 E-value=2.1e-06 Score=81.16 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=52.5
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHH----HHHHcCCCCC-----Cc--------------ccC-
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGI----KVKEADLERN-----DR--------------SFG- 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~----r~~~~gl~d~-----D~--------------~vg- 447 (525)
.+||||| +..++++. +++|+|||+|++|++.+.+ +.+..++..- |. .+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~~~~~ 108 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHVLMPW 108 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEEESCC
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEEEccc
Confidence 4999999 77888765 7999999999998886433 3333444321 22 111
Q ss_pred -------cccHHHHHHHHHhccCCCcEEEEEE
Q 043102 448 -------HEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 448 -------~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.++...+++++.++|||||++++..
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 109 GSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp HHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 0122789999999999999999943
No 121
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.11 E-value=1.2e-05 Score=80.04 Aligned_cols=115 Identities=7% Similarity=0.062 Sum_probs=74.8
Q ss_pred Ceehhhc---------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcC--------CCC-----------------C-
Q 043102 399 REVIFLG---------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEAD--------LER-----------------N- 442 (525)
Q Consensus 399 ~rVLDIG---------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~g--------l~d-----------------~- 442 (525)
.+||||| +..+++. .+++|+|||+|++|++.|++++...+ +.+ .
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~ 158 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRP 158 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSC
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCC
Confidence 4899999 2233333 47999999999999999999974311 110 1
Q ss_pred Cc--------ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcC
Q 043102 443 DR--------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAAS 514 (525)
Q Consensus 443 D~--------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~ 514 (525)
|. ++..+.....++++.++|||||++++....... . .......+.+.+...| ....+.+++.+.+ .
T Consensus 159 d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~s~~ei~~~l---~ 232 (274)
T 2qe6_A 159 AAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-L-PAQQKLARITRENLGE-GWARTPEEIERQF---G 232 (274)
T ss_dssp CEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-C-HHHHHHHHHHHHHHSC-CCCBCHHHHHHTT---T
T ss_pred EEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-h-HHHHHHHHHHHhcCCC-CccCCHHHHHHHh---C
Confidence 33 233345889999999999999999998876532 1 0001111222222223 4668999999887 2
Q ss_pred CcEEE
Q 043102 515 RLWYN 519 (525)
Q Consensus 515 gl~V~ 519 (525)
||++.
T Consensus 233 G~~l~ 237 (274)
T 2qe6_A 233 DFELV 237 (274)
T ss_dssp TCEEC
T ss_pred CCeEc
Confidence 78764
No 122
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.09 E-value=3.4e-06 Score=76.89 Aligned_cols=80 Identities=14% Similarity=0.040 Sum_probs=61.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc--------------ccC---
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR--------------SFG--- 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~--------------~vg--- 447 (525)
+..+||||| ++.++++..++|+|+|+|+++++.|+++++..++.++ |. ...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 345999999 6778876336999999999999999999988877533 21 111
Q ss_pred -cccHHHHHHHHH--hccCCCcEEEEEEecCC
Q 043102 448 -HEYMEEFFGCCE--SLIAKDGLFVLQFISIP 476 (525)
Q Consensus 448 -~~~~~~~f~~i~--r~LkpGG~~viq~i~~~ 476 (525)
...++..++.+. ++|||||++++......
T Consensus 111 ~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 111 AKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 245677788887 99999999999876543
No 123
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.09 E-value=3.2e-06 Score=79.38 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=78.6
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH---cCCC-------CC--Cc----cc--CcccHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE---ADLE-------RN--DR----SF--GHEYMEE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~---~gl~-------d~--D~----~v--g~~~~~~ 453 (525)
..+||||| +..+++. |++|+|+|+|+++++.|+++..+ ..+. +. |. .+ ...+...
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 111 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWA 111 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHH
Confidence 34999999 6777876 89999999999999999987532 1111 11 33 11 1246689
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHh---hcccC-CCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMK---EYIFP-GGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~---kYIFP-Gg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++++.++|||||++++..................|.. .+.-+ .....+..++.+.++++ ||++.-..
T Consensus 112 ~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~ 183 (230)
T 3cc8_A 112 VIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKA-GYSISKVD 183 (230)
T ss_dssp HHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHT-TEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHc-CCeEEEEE
Confidence 99999999999999999765432210000000000000 00001 12457899999999995 99987554
No 124
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.09 E-value=4.1e-06 Score=75.73 Aligned_cols=107 Identities=10% Similarity=0.032 Sum_probs=74.8
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc-------CCCCC--Cc----cc--CcccHHHHHHH
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA-------DLERN--DR----SF--GHEYMEEFFGC 457 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~-------gl~d~--D~----~v--g~~~~~~~f~~ 457 (525)
.+||||| +..+++. +.+|+|+|+|+++++.|+++.... .+.+. |. .+ ...+...++++
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~~~~~~~~~l~~ 97 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEF-ATKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFHDMDDKQHVISE 97 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTT-EEEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCSTTCSCHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHhh-cCeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchhcccCHHHHHHH
Confidence 4999999 7778876 459999999999999999982211 11111 33 11 13578899999
Q ss_pred HHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 458 CESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 458 i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+.++|||||++++.+....+..+. .+ .....+.+++.+.++ ||++.-..
T Consensus 98 ~~~~L~pgG~l~~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~l~---Gf~~~~~~ 146 (170)
T 3i9f_A 98 VKRILKDDGRVIIIDWRKENTGIG-----PP--------LSIRMDEKDYMGWFS---NFVVEKRF 146 (170)
T ss_dssp HHHHEEEEEEEEEEEECSSCCSSS-----SC--------GGGCCCHHHHHHHTT---TEEEEEEE
T ss_pred HHHhcCCCCEEEEEEcCccccccC-----ch--------HhhhcCHHHHHHHHh---CcEEEEcc
Confidence 999999999999988765543211 11 112258888888877 89887554
No 125
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.08 E-value=3.5e-06 Score=81.26 Aligned_cols=81 Identities=10% Similarity=0.160 Sum_probs=65.7
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C--------------c----
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------D--------------R---- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D--------------~---- 444 (525)
...+||||| ++.+|+.. +++|+++|+|+++++.|++++++.|+.++ | .
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 345999999 78888764 68999999999999999999988887543 2 2
Q ss_pred ---ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
.....++..+++++.++|||||+++++.+....
T Consensus 152 V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g 187 (232)
T 3cbg_A 152 IFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHG 187 (232)
T ss_dssp EEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCC
Confidence 112467899999999999999999998876543
No 126
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.08 E-value=1.1e-05 Score=80.35 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=76.1
Q ss_pred CCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------ccC-cccH
Q 043102 398 VREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------DR------------SFG-HEYM 451 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------~vg-~~~~ 451 (525)
+.+|||+| ++.+|+. |+ +|+|+|+|+++++.|+++++..|+.++ |. .+. ....
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~-~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~~ 204 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRT 204 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG
T ss_pred CCEEEEecccCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCchhH
Confidence 45999999 8888886 55 799999999999999999998888754 33 111 2344
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNL 520 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~ 520 (525)
..+++++.++|||||++++.+.+.... . .-....++.++++++ |+++..
T Consensus 205 ~~~l~~~~~~LkpgG~l~~~~~~~~~~----------------~---~~~~~~~i~~~~~~~-G~~~~~ 253 (278)
T 2frn_A 205 HEFIPKALSIAKDGAIIHYHNTVPEKL----------------M---PREPFETFKRITKEY-GYDVEK 253 (278)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEEEEGGG----------------T---TTTTHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHCCCCeEEEEEEeecccc----------------c---cccHHHHHHHHHHHc-CCeeEE
Confidence 689999999999999999987652111 0 113456777777774 888765
No 127
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.08 E-value=5.2e-06 Score=80.05 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=76.6
Q ss_pred CCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcC--------------------------------
Q 043102 398 VREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEAD-------------------------------- 438 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~g-------------------------------- 438 (525)
..+||||| ++.+++. +. +|+|+|+|+++++.|+++++..+
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 34999999 6666664 66 99999999999999998875432
Q ss_pred C--------------CC---C--Cc--------cc--CcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhH
Q 043102 439 L--------------ER---N--DR--------SF--GHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDF 489 (525)
Q Consensus 439 l--------------~d---~--D~--------~v--g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~f 489 (525)
+ .+ . |. ++ ..+++..+++++.++|||||++++....... .|.. .
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~---~--- 208 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YYMI---G--- 208 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEEE---T---
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eEEc---C---
Confidence 1 01 0 22 11 1236789999999999999999998754322 1110 0
Q ss_pred HhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 490 MKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 490 i~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
...++ ....+.+++.+.++++ ||++.-..
T Consensus 209 --~~~~~-~~~~~~~~~~~~l~~a-Gf~~~~~~ 237 (265)
T 2i62_A 209 --EQKFS-SLPLGWETVRDAVEEA-GYTIEQFE 237 (265)
T ss_dssp --TEEEE-CCCCCHHHHHHHHHHT-TCEEEEEE
T ss_pred --Ccccc-ccccCHHHHHHHHHHC-CCEEEEEE
Confidence 11111 2345788999999995 99886543
No 128
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.05 E-value=4.2e-06 Score=80.82 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=60.3
Q ss_pred CCeehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------------Cc--ccCc
Q 043102 398 VREVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN--------------------DR--SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------------D~--~vg~ 448 (525)
..+||||| ++.+|+. .+++|+|||+|+++++.|+++++..|+.+- |. ..+.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc
Confidence 45999999 7777753 478999999999999999999988776421 22 1234
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.++..+++.+.++|||||++++.
T Consensus 151 ~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 151 ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhcCCCCEEEEE
Confidence 67899999999999999999885
No 129
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.05 E-value=5.7e-06 Score=85.60 Aligned_cols=123 Identities=13% Similarity=0.152 Sum_probs=84.1
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHH----HcC----CCCCCc--------ccCcccHHHHH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVK----EAD----LERNDR--------SFGHEYMEEFF 455 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~----~~g----l~d~D~--------~vg~~~~~~~f 455 (525)
.+||||| +..+++++ +++++++|+ +++++.|+++-. ... +...|. +...++...++
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l 283 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLL 283 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhhcCCHHHHHHHH
Confidence 4999999 77888764 789999999 889888875310 001 111144 23445567899
Q ss_pred HHHHhccCCCcEEEEEEecCCCcchhc----ccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEEe
Q 043102 456 GCCESLIAKDGLFVLQFISIPDERYNE----FRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAVS 523 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~~~~~~~~----~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~~ 523 (525)
++++++|||||+++|.++..++..... .....++...-.++++...+.+++.+.++++ ||+++-...
T Consensus 284 ~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~A-GF~~v~~~~ 354 (368)
T 3reo_A 284 KNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMAS-GFRGFKVAS 354 (368)
T ss_dssp HHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHT-TCCEEEEEE
T ss_pred HHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHC-CCeeeEEEE
Confidence 999999999999999998877643111 0011222211124788899999999999996 999876543
No 130
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.04 E-value=5.4e-06 Score=78.72 Aligned_cols=81 Identities=10% Similarity=0.200 Sum_probs=65.8
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------------ 444 (525)
...+||||| ++.+|+.. +++|+++|+|+++++.|+++++..|+.++ |.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 345999999 77888753 68999999999999999999999888654 22
Q ss_pred ---ccCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
......+..+++.+.++|||||+++++.+....
T Consensus 149 v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 184 (229)
T 2avd_A 149 AVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRG 184 (229)
T ss_dssp EEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCC
Confidence 112456889999999999999999998776543
No 131
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.04 E-value=5.2e-06 Score=79.96 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=64.8
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C-------------------
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------D------------------- 443 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D------------------- 443 (525)
+..+||||| ++.+++.. +++|+++|+|+++++.|++++++.|+.++ |
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 345999999 77888764 68999999999999999999988776542 2
Q ss_pred ------c-------ccCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 444 ------R-------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 444 ------~-------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
. ..+.+++..+++.+.++|||||++++..+...
T Consensus 140 ~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp TTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred cccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 1 11356788999999999999999999876554
No 132
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.03 E-value=4.5e-06 Score=79.12 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=74.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHH-H--HcC-----CCCC--Cc----cc--CcccHHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKV-K--EAD-----LERN--DR----SF--GHEYMEEFF 455 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~-~--~~g-----l~d~--D~----~v--g~~~~~~~f 455 (525)
..+||||| +..+++. +|+|+|+++++.|+++- . ... +.+. |. .+ ...+...++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l 122 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERAL 122 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHH
Confidence 45999999 5555543 99999999999999860 0 000 1111 33 11 135678999
Q ss_pred HHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEEe
Q 043102 456 GCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAVS 523 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~~ 523 (525)
+++.++|||||++++............+... ......+......+..++.+.++++ ||++.-...
T Consensus 123 ~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~-Gf~~~~~~~ 187 (219)
T 1vlm_A 123 KEAYRILKKGGYLIVGIVDRESFLGREYEKN--KEKSVFYKNARFFSTEELMDLMRKA-GFEEFKVVQ 187 (219)
T ss_dssp HHHHHHEEEEEEEEEEEECSSSHHHHHHHHT--TTC-CCSTTCCCCCHHHHHHHHHHT-TCEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEeCCccHHHHHHHHH--hcCcchhcccccCCHHHHHHHHHHC-CCeEEEEec
Confidence 9999999999999998765332110000000 0001112234667999999999995 999876543
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.98 E-value=7.9e-06 Score=76.20 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=61.9
Q ss_pred CCCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--ccCcccH
Q 043102 397 KVREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--SFGHEYM 451 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--~vg~~~~ 451 (525)
+..+||||| ++.+++.. +++|+|+|+|+++++.|+++++..++.+- |. .-+..++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~~~~ 144 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASL 144 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCSSSH
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEeccCCH
Confidence 356999999 77788763 78999999999999999999988776422 22 1234678
Q ss_pred HHHHHHHHhccCCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~ 472 (525)
..+++.+.++|||||++++..
T Consensus 145 ~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 145 NDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp HHHHHHHTTSEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEe
Confidence 999999999999999999863
No 134
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.98 E-value=8.7e-06 Score=74.29 Aligned_cols=79 Identities=15% Similarity=0.061 Sum_probs=60.2
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------C----------------c----
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------D----------------R---- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D----------------~---- 444 (525)
+..+|||+| ++.++++...+|+|+|+|+++++.|+++++..++.++ | .
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 345999999 6667775347999999999999999999988776432 1 1
Q ss_pred -ccCcccHHHHHHHH--HhccCCCcEEEEEEecC
Q 043102 445 -SFGHEYMEEFFGCC--ESLIAKDGLFVLQFISI 475 (525)
Q Consensus 445 -~vg~~~~~~~f~~i--~r~LkpGG~~viq~i~~ 475 (525)
.......+..++.+ .++|||||++++.....
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 124 PPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 01134567888888 89999999999976543
No 135
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.98 E-value=6.3e-06 Score=80.93 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=60.8
Q ss_pred CCeehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------------Cc--ccCc
Q 043102 398 VREVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN--------------------DR--SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------------D~--~vg~ 448 (525)
..+||||| ++.+|.. .+++|+|||+|+++++.|++++++.|+.+- |. .-..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 35999999 7888876 478999999999999999999998887532 11 1123
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.+++.+++.+.++|||||++++..
T Consensus 161 ~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 161 APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 578999999999999999998743
No 136
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.98 E-value=5.5e-05 Score=79.63 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=88.3
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc-----eeEeccCCCCCCCCCCCccccccccCCCC
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRTGGAFH-----DIFLHCDKNSMPQNPAAWSAWSFLGSLDS 186 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~~~aWaswNy~~~~~~ 186 (525)
++.|.+.+| +..+|+||+|+++.++.+||.+ +.. +.|..++ .+.+.-|... +.. +...-|+...+.
T Consensus 266 ~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~-~~~---~~~~~~~~~~~~~v~l~~~~~~-~~~---~~g~g~l~~~~~ 336 (475)
T 3lov_A 266 RYRLKTDHG-PEYADYVLLTIPHPQVVQLLPD-AHL---PELEQLTTHSTATVTMIFDQQQ-SLP---IEGTGFVVNRRA 336 (475)
T ss_dssp EEEEECTTC-CEEESEEEECSCHHHHHHHCTT-SCC---HHHHTCCEEEEEEEEEEEECCS-SCS---SSSSEEEECTTS
T ss_pred EEEEEECCC-eEECCEEEECCCHHHHHHHcCc-cCH---HHHhcCCCCeEEEEEEEECCcC-CCC---CCCEEEEecCCC
Confidence 688998888 7899999999999999999975 432 5566666 5566555544 211 111111111100
Q ss_pred C--------------CCCCCCCCeE-EEcC-C---------------------------CCCCcc-eeeEEEecCCCCCH
Q 043102 187 K--------------NLGETSLPYL-VTLN-P---------------------------DHAPEH-TLLKWSTGPPVPFV 222 (525)
Q Consensus 187 ~--------------nl~~~~~~~f-vTLN-p---------------------------~~~p~~-il~~~~y~HPv~~~ 222 (525)
. +..+ +..++ +++. + ..+|.. .+.+|.+.-|.+++
T Consensus 337 ~~~~~~~~~~s~~~~~~~p-~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~ 415 (475)
T 3lov_A 337 PYSITACTAIDQKWNHSAP-DHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTV 415 (475)
T ss_dssp SCSEEEEEEHHHHCTTTCT-TEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCT
T ss_pred CCceEEEEEEcccCCCCCC-CcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCC
Confidence 0 0000 11111 1110 0 001222 46689888888888
Q ss_pred HHHHHHHHhhh-h-cCCCCeEEeccCCCCCCchhhhchHHHHHhhhcC
Q 043102 223 AASKASLELGH-I-QGRRGIWFRGAYQGYGFHEDGLKDLSINSCMTYG 268 (525)
Q Consensus 223 ~a~~aq~~l~~-i-qG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~llG 268 (525)
........+.. + +...+++|||+|+...-.|+|+.||.++|+.+++
T Consensus 416 g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~i~~ 463 (475)
T 3lov_A 416 GHADRIQRVREEVLAQYPGIYLAGLAYDGVGLPDCVASAKTMIESIEL 463 (475)
T ss_dssp THHHHHHHHHHHHHHHSTTEEECSTTTSCSSHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 76544333433 2 2346899999887655579999999999999853
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.96 E-value=9.7e-06 Score=79.23 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=58.6
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc---------------cc----
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR---------------SF---- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~---------------~v---- 446 (525)
..+||||| ++.+|++..++|+|||+|+++++.|+++++..++.++ |. ..
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 45999999 7788877555999999999999999999998888754 21 00
Q ss_pred ------Cc---------------ccHHHHHHHHHhccCCCcEEEE
Q 043102 447 ------GH---------------EYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 447 ------g~---------------~~~~~~f~~i~r~LkpGG~~vi 470 (525)
+. ..+..+++.+.++|||||++++
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 00 2356799999999999999998
No 138
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.95 E-value=4.8e-06 Score=78.22 Aligned_cols=74 Identities=15% Similarity=0.134 Sum_probs=56.6
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC--------CCC----C--Cc--------ccC-cc
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD--------LER----N--DR--------SFG-HE 449 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g--------l~d----~--D~--------~vg-~~ 449 (525)
.+||||| +..+++. +.+|+|+|+|+++++.|++++...+ +.+ . |. |+. .+
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~ 131 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYLEDMT 131 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGSSSHH
T ss_pred CcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhCCCHH
Confidence 3999999 6677765 7899999999999999999976532 000 0 33 333 24
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEe
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
.+..+++++.++|||||++++.+.
T Consensus 132 ~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 132 QMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEEEec
Confidence 557889999999999999998654
No 139
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.95 E-value=1.5e-06 Score=81.52 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=67.7
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc------------ccCcccHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----DR------------SFGHEYMEE 453 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~------------~vg~~~~~~ 453 (525)
+..+||||| +..+++. +++|+|+|+|+++++.|+++++..|+..- |. .+.......
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 155 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPE 155 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhh
Confidence 345999999 7778876 89999999999999999999998776521 21 000001112
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcc-hhcccCchhHHhhcccCCCCCCC
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDER-YNEFRLSSDFMKEYIFPGGCLPS 502 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~-~~~~~~~~~fi~kYIFPGg~LPs 502 (525)
+.+.+.++|||||++++..-. .... ....+....|..+.++|-.++|-
T Consensus 156 ~~~~~~~~L~pgG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~pl 204 (210)
T 3lbf_A 156 IPTALMTQLDEGGILVLPVGE-EHQYLKRVRRRGGEFIIDTVEAVRFVPL 204 (210)
T ss_dssp CCTHHHHTEEEEEEEEEEECS-SSCEEEEEEEETTEEEEEEEEECCCCBC
T ss_pred hhHHHHHhcccCcEEEEEEcC-CceEEEEEEEcCCeEEEEEeccEEEEEc
Confidence 224789999999999996544 2221 11112234555666666666654
No 140
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.94 E-value=7.4e-07 Score=85.56 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=56.7
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc-----cc-C
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR-----SF-G 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~-----~v-g 447 (525)
+..+||||| ++.+++. |++|+|+|+|+++++.|+++++..|+.++ |. .. +
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGG 156 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSS
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCC
Confidence 456999999 7888875 89999999999999999999998887433 22 01 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
..+....+.++.++|||||++++.
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cchhhhHHHHHHhhcCCcceeHHH
Confidence 233334666789999999997664
No 141
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.93 E-value=1.2e-05 Score=83.06 Aligned_cols=123 Identities=13% Similarity=0.095 Sum_probs=84.1
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHH----HcC----CCCCCc--------ccCcccHHHHH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVK----EAD----LERNDR--------SFGHEYMEEFF 455 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~----~~g----l~d~D~--------~vg~~~~~~~f 455 (525)
.+||||| +..+++++ +++++++|+ +++++.|+++-. ... +...|. +...++...++
T Consensus 203 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L 281 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLL 281 (364)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHHHHH
Confidence 4999999 77788764 789999999 888888775310 001 111144 23445667899
Q ss_pred HHHHhccCCCcEEEEEEecCCCcchhccc----CchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEEe
Q 043102 456 GCCESLIAKDGLFVLQFISIPDERYNEFR----LSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAVS 523 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~~~~~~~~~~----~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~~ 523 (525)
++++++|||||+++|.++..++....... ...++...-..+++...+.+++.+.++++ ||+++-...
T Consensus 282 ~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~A-GF~~v~~~~ 352 (364)
T 3p9c_A 282 KNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGA-GFTGVKSTY 352 (364)
T ss_dssp HHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHT-TCCEEEEEE
T ss_pred HHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHC-CCceEEEEE
Confidence 99999999999999999887764311100 01222211124788889999999999995 999876543
No 142
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.93 E-value=1.1e-05 Score=78.59 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=55.4
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH------cCCCCC-----Cc----------------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE------ADLERN-----DR---------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~------~gl~d~-----D~---------------- 444 (525)
.+||||| ++.+|+.. ++.|+|||+|++|++.|++++++ .++..- |+
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v 127 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKM 127 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEE
Confidence 3899999 77888764 68999999999999999998764 233211 22
Q ss_pred --ccCccc-----------HHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 --SFGHEY-----------MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 --~vg~~~-----------~~~~f~~i~r~LkpGG~~viq~i 473 (525)
+..... .+.+++++.++|||||++++.+-
T Consensus 128 ~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 128 FFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 111110 15799999999999999998753
No 143
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.93 E-value=7.7e-05 Score=79.87 Aligned_cols=148 Identities=15% Similarity=0.166 Sum_probs=89.6
Q ss_pred eCCCceEeCCEEEEecChHHHHHhhcC---CCCHHHHhhccCCc-----eeEeccCCCCCCCCCCCccccccccCCCC--
Q 043102 117 CGDGSREFYNSCVMALHAPDALKILGN---QATFDETRTGGAFH-----DIFLHCDKNSMPQNPAAWSAWSFLGSLDS-- 186 (525)
Q Consensus 117 ~~~g~~e~fD~VV~A~hadqAL~lL~~---~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~~~aWaswNy~~~~~~-- 186 (525)
..+|++..||+||+|+|++++.+||.+ ..+++.++.|+.++ .+.+.-|....+ +. .-.+|-|..+.+.
T Consensus 251 ~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~-~~~~~i~vp~~~~~~ 328 (484)
T 4dsg_A 251 FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPP-HL-KTACWLYFPEDTSPF 328 (484)
T ss_dssp ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCG-GG-TTCCEEECCSTTCSC
T ss_pred ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcc-cC-CCCeEEEEEcCCCeE
Confidence 367777899999999999999999974 14566778899888 333334433211 00 0012222221110
Q ss_pred ------CCCC----CCCCCeE---EEcCCC---------------------CCCc-c----eeeEEEecCCCCCHHHHHH
Q 043102 187 ------KNLG----ETSLPYL---VTLNPD---------------------HAPE-H----TLLKWSTGPPVPFVAASKA 227 (525)
Q Consensus 187 ------~nl~----~~~~~~f---vTLNp~---------------------~~p~-~----il~~~~y~HPv~~~~a~~a 227 (525)
+|+. +.++.++ ++-.+. ..++ + .+.+|.+.-|+|++...+.
T Consensus 329 ~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~ 408 (484)
T 4dsg_A 329 YRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNL 408 (484)
T ss_dssp SEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHH
T ss_pred EEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHH
Confidence 0111 0011111 121110 1122 2 2458999999999987655
Q ss_pred HHHhhh-hcCCCCeEEeccC--CCC--CCchhhhchHHHHHhhhc
Q 043102 228 SLELGH-IQGRRGIWFRGAY--QGY--GFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 228 q~~l~~-iqG~~~~~fcGay--~g~--GfHEdg~~Sgl~aA~~ll 267 (525)
-+++.. ++.. +|++||.| +.| +-.++++.||+.||+.++
T Consensus 409 ~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 409 LEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 544443 4445 89999998 456 458999999999999987
No 144
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.93 E-value=1.5e-05 Score=75.22 Aligned_cols=75 Identities=21% Similarity=0.340 Sum_probs=58.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc---ccCc
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~---~vg~ 448 (525)
..+||||| ++.+|+.. +++|+|||+|+++++.|+++++..|+..- |. ....
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 35999999 77788764 68999999999999999999988776321 11 0010
Q ss_pred c-----------cHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 E-----------YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~-----------~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
. .++.+++++.++|||||++++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 0 23689999999999999999865
No 145
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.93 E-value=9.9e-06 Score=76.95 Aligned_cols=74 Identities=18% Similarity=0.267 Sum_probs=57.9
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----C-------------ccc-------
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----D-------------RSF------- 446 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----D-------------~~v------- 446 (525)
..+||||| ++.+++..+++|+|+|+|+++++.|+++++..++... | ..+
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYD 135 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC-
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcC
Confidence 35999999 5677775589999999999999999999988775211 2 101
Q ss_pred ------------------CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 447 ------------------GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 447 ------------------g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
+...+..+++++.++|||||++++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 136 KPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp --------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 1222588999999999999999985
No 146
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.93 E-value=4.4e-05 Score=80.88 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=83.7
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhhcC-CCCHHHHhhccCCc-----eeEeccCCCCCCCCCCCccccccccCCC
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKILGN-QATFDETRTGGAFH-----DIFLHCDKNSMPQNPAAWSAWSFLGSLD 185 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~-~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~~~aWaswNy~~~~~ 185 (525)
+|.|.+.+|.+..+|+||+|++...+.+|+-. ..+...++.+..+. .++|+-|... |..|.+....+
T Consensus 288 ~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~-------~~~~~g~~~~~ 360 (495)
T 2vvm_A 288 AARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKD-------MRSWTGIAYPF 360 (495)
T ss_dssp SEEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG-------GGGEEEEECSS
T ss_pred EEEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc-------CCCceeEecCC
Confidence 68888888877899999999999998888632 12444555665554 8888877643 33333222111
Q ss_pred CC--------CCCCCCCCeEEEcCC-----------------------C-CCCcc-eeeEEE---e---cCCCCCHHHH-
Q 043102 186 SK--------NLGETSLPYLVTLNP-----------------------D-HAPEH-TLLKWS---T---GPPVPFVAAS- 225 (525)
Q Consensus 186 ~~--------nl~~~~~~~fvTLNp-----------------------~-~~p~~-il~~~~---y---~HPv~~~~a~- 225 (525)
.. ..+ .+..+++.+.+ . .+|.. +..+|. | ..+.+.+...
T Consensus 361 ~~~~~~~~~~~~~-~~~~vl~~~~~~~~~~~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~ 439 (495)
T 2vvm_A 361 NKLCYAIGDGTTP-AGNTHLVCFGNSANHIQPDEDVRETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVS 439 (495)
T ss_dssp CSSCEEEEEEECT-TSCEEEEEEECSTTCCCTTTCHHHHHHHHHTTSTTSCCEEEEEECCTTTCTTTSSSSCCCCTTHHH
T ss_pred CCcEEEecCCCCC-CCCeEEEEEeCccccCCCHHHHHHHHHHHHHhcCCCCCceEEEEeEcCCCCCCCCCccCcCCCcch
Confidence 10 011 11233332211 1 01111 122341 1 2223334333
Q ss_pred HHHHHhhhhcCCCCeEEeccCCC---CCCchhhhchHHHHHhhhc
Q 043102 226 KASLELGHIQGRRGIWFRGAYQG---YGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 226 ~aq~~l~~iqG~~~~~fcGay~g---~GfHEdg~~Sgl~aA~~ll 267 (525)
.....+.. ..++|+|||+|+. +|+-|+|+.||++||++++
T Consensus 440 ~~~~~l~~--p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~ 482 (495)
T 2vvm_A 440 ECLQGLRE--KHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVL 482 (495)
T ss_dssp HHHHHHHC--CBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhC--cCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHH
Confidence 12233332 3568999999974 6899999999999999874
No 147
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.92 E-value=6.9e-06 Score=79.41 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=62.3
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------ccCccc
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------SFGHEY 450 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------~vg~~~ 450 (525)
+..+|||+| +..+++.. +++|+|+|+|+++++.|+++++..|+.++ |. .....+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~~ 172 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLPQ 172 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSSC
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCCC
Confidence 345999999 77777762 78999999999999999999999888764 22 123445
Q ss_pred HHHHHHHHHhccCCCcEEEEEEe
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i 473 (525)
...+++++.++|||||++++...
T Consensus 173 ~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 173 PERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp GGGGHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHHHcCCCCEEEEEEC
Confidence 56899999999999999998654
No 148
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.91 E-value=1.9e-05 Score=71.74 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=61.0
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------C------------c--ccC-cc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------D------------R--SFG-HE 449 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D------------~--~vg-~~ 449 (525)
+..+||||| ++.+++. +++|+|+|+|+++++.|+++++..++..+ | . ..+ ..
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHh-cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCchH
Confidence 345999999 6777775 59999999999999999999988877433 2 1 111 25
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEe
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
++..+++.+.++|||||++++...
T Consensus 112 ~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 112 ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEec
Confidence 689999999999999999998654
No 149
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.90 E-value=8.5e-06 Score=84.71 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=62.1
Q ss_pred cCCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------C-----------c-------
Q 043102 396 FKVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------D-----------R------- 444 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------D-----------~------- 444 (525)
+++.+||||| ++.+++. |+ +|+|||+| +|++.|+++++..|+.++ | .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4556999999 7778875 76 99999999 999999999999888764 2 2
Q ss_pred cc--CcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 SF--GHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ~v--g~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+. ....+..+++.+.++|||||+++++..+
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 11 1256888999999999999999886543
No 150
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.90 E-value=1.5e-05 Score=71.40 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=59.4
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----C-------------c--------cc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----D-------------R--------SF 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----D-------------~--------~v 446 (525)
..+|||+| ++.++++ +.+|+|+|+|+++++.|+++++..++... | . ..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 45999999 7777775 88899999999999999999987765211 1 1 01
Q ss_pred CcccHHHHHHHHH--hccCCCcEEEEEEecCC
Q 043102 447 GHEYMEEFFGCCE--SLIAKDGLFVLQFISIP 476 (525)
Q Consensus 447 g~~~~~~~f~~i~--r~LkpGG~~viq~i~~~ 476 (525)
. ...+..++.+. ++|||||++++......
T Consensus 121 ~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 121 A-MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp T-SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred c-hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 1 45677888888 99999999999766543
No 151
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.88 E-value=1.6e-05 Score=77.02 Aligned_cols=74 Identities=8% Similarity=0.128 Sum_probs=56.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHc--------CCCCC-----Cc--------------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEA--------DLERN-----DR-------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~--------gl~d~-----D~-------------- 444 (525)
.+||||| ++.+|+.. +++|+|||+|+++++.|+++++.. ++..- |.
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d 130 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLS 130 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccC
Confidence 4899999 77888764 579999999999999999998764 55321 22
Q ss_pred ----ccCccc-----------HHHHHHHHHhccCCCcEEEEEE
Q 043102 445 ----SFGHEY-----------MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 ----~vg~~~-----------~~~~f~~i~r~LkpGG~~viq~ 472 (525)
++.... .+.+++++.++|||||++++.+
T Consensus 131 ~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 131 KMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 111111 1589999999999999999954
No 152
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.87 E-value=2.6e-05 Score=73.48 Aligned_cols=79 Identities=11% Similarity=0.054 Sum_probs=59.8
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC-CC------Cc----------c-c-------
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE-RN------DR----------S-F------- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~-d~------D~----------~-v------- 446 (525)
..+|||+| ++.++++...+|+|||+|+++++.|+++++..|+. ++ |. . +
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 45999999 66666653359999999999999999999888873 22 22 1 1
Q ss_pred --CcccHHHHHHHH--HhccCCCcEEEEEEecCC
Q 043102 447 --GHEYMEEFFGCC--ESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 447 --g~~~~~~~f~~i--~r~LkpGG~~viq~i~~~ 476 (525)
.....+.+++.+ .++|||||++++......
T Consensus 134 ~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 134 PFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 124577889999 678999999999776543
No 153
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.86 E-value=3.6e-05 Score=72.57 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=59.0
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc------------------ccC
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----DR------------------SFG 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~------------------~vg 447 (525)
+..+|||+| ++.++++...+|+|||+|+++++.|+++++..++..- |. ...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 345999999 6666765234999999999999999999988876211 21 112
Q ss_pred cccHHHHHHHHHh--ccCCCcEEEEEEecC
Q 043102 448 HEYMEEFFGCCES--LIAKDGLFVLQFISI 475 (525)
Q Consensus 448 ~~~~~~~f~~i~r--~LkpGG~~viq~i~~ 475 (525)
....+.+++.+.+ +|||||++++.....
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3467788888866 599999999977653
No 154
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.86 E-value=6e-05 Score=67.95 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=71.7
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--ccCcccHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--SFGHEYME 452 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--~vg~~~~~ 452 (525)
+..+||||| ++.+++ .+++|+|+|+|+++++.|+++++..|+..- |. ..+..+..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~~~~~ 113 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGTKNIE 113 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSCSCHH
T ss_pred CCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCcccHH
Confidence 345999999 677777 689999999999999999999998877321 22 11126789
Q ss_pred HHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.+++++.++ |||++++...... ...++.+.+++. |+.+....
T Consensus 114 ~~l~~~~~~--~gG~l~~~~~~~~-------------------------~~~~~~~~l~~~-g~~~~~~~ 155 (183)
T 2yxd_A 114 KIIEILDKK--KINHIVANTIVLE-------------------------NAAKIINEFESR-GYNVDAVN 155 (183)
T ss_dssp HHHHHHHHT--TCCEEEEEESCHH-------------------------HHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHhhC--CCCEEEEEecccc-------------------------cHHHHHHHHHHc-CCeEEEEE
Confidence 999999999 9999998753210 145666777775 67776543
No 155
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.86 E-value=4.3e-06 Score=79.86 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=53.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc-----CC----C---CC--CcccCcccHHHHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA-----DL----E---RN--DRSFGHEYMEEFFGC 457 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~-----gl----~---d~--D~~vg~~~~~~~f~~ 457 (525)
..+||||| +..+++. |++|+|+|+|+++++.|+++.... .+ . +. |..+...+...++++
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~l~~ 127 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSVILR 127 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGGGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHHHHH
Confidence 34999999 7778876 899999999999999999983211 11 0 11 332223467789999
Q ss_pred HHhccCCCcEEE
Q 043102 458 CESLIAKDGLFV 469 (525)
Q Consensus 458 i~r~LkpGG~~v 469 (525)
+.++|||||+++
T Consensus 128 ~~~~LkpgG~l~ 139 (226)
T 3m33_A 128 LPELAAPDAHFL 139 (226)
T ss_dssp HHHHEEEEEEEE
T ss_pred HHHHcCCCcEEE
Confidence 999999999998
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.86 E-value=1.8e-06 Score=81.24 Aligned_cols=107 Identities=10% Similarity=0.060 Sum_probs=71.1
Q ss_pred CCCeehhhc------HHHHHHhcC--CEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------CcccCcccH
Q 043102 397 KVREVIFLG------TIEVVKRTG--CKYTGITLAEKQLKYAGIKVKEADLERN-----------------DRSFGHEYM 451 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G--~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~~vg~~~~ 451 (525)
+..+||||| +..+++..| ++|+|+|+|+++++.|+++++..|+..- |..+...-.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAG 156 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCch
Confidence 345999999 677777654 8999999999999999999887665321 220000001
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCCCcchhcc-cCchhHHhhcccCCCCCCCHH
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIPDERYNEF-RLSSDFMKEYIFPGGCLPSLS 504 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~-~~~~~fi~kYIFPGg~LPsl~ 504 (525)
..+.+++.++|||||++++...... .....+ +....|..++++|....|.+.
T Consensus 157 ~~~~~~~~~~L~pgG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 209 (215)
T 2yxe_A 157 PKIPEPLIRQLKDGGKLLMPVGRYL-QRLVLAEKRGDEIIIKDCGPVAFVPLVG 209 (215)
T ss_dssp SSCCHHHHHTEEEEEEEEEEESSSS-EEEEEEEEETTEEEEEEEEEECCCBCBS
T ss_pred HHHHHHHHHHcCCCcEEEEEECCCC-cEEEEEEEeCCEEEEEEeccEEEEeccc
Confidence 1223589999999999999765443 322222 223457778888877777643
No 157
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.84 E-value=1.3e-05 Score=82.33 Aligned_cols=76 Identities=25% Similarity=0.292 Sum_probs=60.7
Q ss_pred cCCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----cc
Q 043102 396 FKVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------------------DR----SF 446 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~v 446 (525)
+++.+||||| ++.+++. |+ +|+|||+| ++++.|+++++..|+.++ |. .+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 4456999999 7778876 65 99999999 599999999999887754 22 11
Q ss_pred -----CcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 447 -----GHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 447 -----g~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
.....+.+++++.++|||||+++.+..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 236788999999999999999985443
No 158
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.82 E-value=1.1e-05 Score=79.12 Aligned_cols=74 Identities=11% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCC-C----CC-------------Cc---cc-C
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADL-E----RN-------------DR---SF-G 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl-~----d~-------------D~---~v-g 447 (525)
..+||||| +..+|+.- ..+|+|+|+|++|++.|++++++.+- . +. |. .+ -
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~ 157 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQ 157 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCC
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccC
Confidence 35999999 77888763 47999999999999999999866431 0 00 22 11 1
Q ss_pred cccHHHHHHHHHhccCCCcEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
+.+...+++++.+.|||||++++-
T Consensus 158 ~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 158 PEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhHHHHHHHHHHhccCCCEEEEE
Confidence 345678999999999999999874
No 159
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.81 E-value=2.5e-05 Score=82.80 Aligned_cols=81 Identities=20% Similarity=0.090 Sum_probs=60.5
Q ss_pred CCCeehhhc------HHHHHHhcCCE-EEEEcCChHHHHHHHHHH-------HHcCCC-CC------Cc-----------
Q 043102 397 KVREVIFLG------TIEVVKRTGCK-YTGITLAEKQLKYAGIKV-------KEADLE-RN------DR----------- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~-VtGIdlS~eql~~Ar~r~-------~~~gl~-d~------D~----------- 444 (525)
++.+||||| ++.+|+..|+. |+|||+|+++++.|++++ +..|+. ++ |.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~ 252 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIAN 252 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCC
Confidence 445999999 77788777884 999999999999998854 344553 22 22
Q ss_pred ---c-----cCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 445 ---S-----FGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 445 ---~-----vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
. .-..+....+++++++|||||++++.....++
T Consensus 253 aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 253 TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp CSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred ccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 0 01246778889999999999999997666554
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.80 E-value=3.3e-05 Score=73.93 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=60.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------C------------c-ccCcccH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------D------------R-SFGHEYM 451 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D------------~-~vg~~~~ 451 (525)
+..+|||+| ++.+++. +.+|+++|+|+++++.|+++.+..++..+ | . .....+.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 169 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREP 169 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSSCG
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCcCH
Confidence 345999999 7788887 89999999999999999999988776433 2 1 1123345
Q ss_pred HHHHHHHHhccCCCcEEEEEEe
Q 043102 452 EEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i 473 (525)
..+++.+.++|||||++++...
T Consensus 170 ~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 170 WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp GGGHHHHHHHBCTTCEEEEEES
T ss_pred HHHHHHHHHHcCCCCEEEEEeC
Confidence 6889999999999999998764
No 161
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.79 E-value=2.1e-05 Score=82.27 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=60.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc-------cc--
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR-------SF-- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~-------~v-- 446 (525)
..+|||+| ++.++++ |++|+|||+|+++++.|+++++..++... |. |.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 34999999 8888886 89999999999999999999988775422 22 22
Q ss_pred --CcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 447 --GHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 447 --g~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.......+++++.++|||||++++..
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 24567899999999999999999854
No 162
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.79 E-value=3.4e-05 Score=75.29 Aligned_cols=76 Identities=17% Similarity=0.139 Sum_probs=63.1
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc----------------ccCcc
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------DR----------------SFGHE 449 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~----------------~vg~~ 449 (525)
.+||||| ++.+|+.. ..+|+++|+|++.++.|+++++..|++++ |. -+|..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~Gg~ 96 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGR 96 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCCChH
Confidence 3999999 78888863 35899999999999999999999999875 22 12334
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEec
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
-...++..+.+.|+|+|++++|.+.
T Consensus 97 ~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 97 LIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp HHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4688999999999999999999773
No 163
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.78 E-value=2.4e-05 Score=73.11 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=69.2
Q ss_pred CCCeehhhc--HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHc-----CC-----CCC--Cc----cc--CcccHHHHH
Q 043102 397 KVREVIFLG--TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEA-----DL-----ERN--DR----SF--GHEYMEEFF 455 (525)
Q Consensus 397 ~~~rVLDIG--a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~-----gl-----~d~--D~----~v--g~~~~~~~f 455 (525)
+..+||||| .-.++...++ +|+|+|+|+++++.|+++.... .+ .+. |. ++ ..++...++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l 115 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVL 115 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHH
Confidence 345999999 1111222277 9999999999999999985211 01 111 33 11 134788999
Q ss_pred HHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHH
Q 043102 456 GCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMS 511 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~ 511 (525)
+++.++|||||++++....... .+..............+....+.+.+++.+.++
T Consensus 116 ~~~~~~L~pgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 116 LEARRVLRPGGALVVGVLEALS-PWAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp HHHHHHEEEEEEEEEEEECTTS-HHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred HHHHHHcCCCCEEEEEecCCcC-cHHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 9999999999999998765432 211000000000001122356689999998887
No 164
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.77 E-value=3.4e-05 Score=73.61 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=52.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC--------CCC---------C-Cc---ccC-c
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD--------LER---------N-DR---SFG-H 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g--------l~d---------~-D~---~vg-~ 448 (525)
+.+||||| +..+|+.. +++|+|||+|+++++.+.+++++.. ... . |. .+. .
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~ 137 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQK 137 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCCST
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEeccCh
Confidence 45999999 67778764 3799999999998877666655321 000 1 33 122 2
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.....+++++.++|||||++++.
T Consensus 138 ~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 138 NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCEEEEE
Confidence 23455699999999999999987
No 165
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.77 E-value=1.5e-05 Score=83.01 Aligned_cols=73 Identities=12% Similarity=0.168 Sum_probs=57.9
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc-------c
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR-------S 445 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~-------~ 445 (525)
.+|||+| ++.++++. +++|+|||+|+++++.|+++++..|+.+. |. |
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 303 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC-
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCCcc
Confidence 4999999 78888875 79999999999999999999988765421 22 1
Q ss_pred ----cCcccHHHHHHHHHhccCCCcEEEEE
Q 043102 446 ----FGHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 446 ----vg~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
++......+++++.++|||||++++-
T Consensus 304 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 304 QQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp ------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 22333457899999999999999984
No 166
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.76 E-value=2.8e-05 Score=79.77 Aligned_cols=73 Identities=23% Similarity=0.241 Sum_probs=57.7
Q ss_pred cCCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----cc
Q 043102 396 FKVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------------------DR----SF 446 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~v 446 (525)
.+..+||||| ++.+++. |+ +|+|||+|+ +++.|++++++.|+.++ |. .+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 4456999999 7777775 65 999999996 99999999988887544 22 11
Q ss_pred -----CcccHHHHHHHHHhccCCCcEEEE
Q 043102 447 -----GHEYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 447 -----g~~~~~~~f~~i~r~LkpGG~~vi 470 (525)
.....+.+++++.++|||||+++.
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 134578899999999999999984
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.75 E-value=4e-05 Score=81.66 Aligned_cols=78 Identities=12% Similarity=0.057 Sum_probs=60.1
Q ss_pred Ceehhhc------HHHHHHhcCC-EEEEEcCChHHHHHH-------HHHHHHcCCC-CC---------------------
Q 043102 399 REVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYA-------GIKVKEADLE-RN--------------------- 442 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~A-------r~r~~~~gl~-d~--------------------- 442 (525)
.+||||| ++.+|+..|+ +|+|||+|+++++.| +++++..|+. .+
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~ 323 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQ 323 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGG
T ss_pred CEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCC
Confidence 4999999 7788876665 899999999999999 8888877742 11
Q ss_pred -Cc-----ccCcccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 443 -DR-----SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 443 -D~-----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
|. .+..++.+..++++.++|||||++++.....+
T Consensus 324 FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 324 CDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp CSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred CCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 22 11235778889999999999999999754433
No 168
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.75 E-value=5.1e-05 Score=77.79 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=60.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC-C------Cc---------------------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER-N------DR--------------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d-~------D~--------------------- 444 (525)
.+|||+| ++.+|+. |++|+|||+|+++++.|+++++..++++ + |.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP 233 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDP 233 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred CcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECC
Confidence 4899999 7888875 8899999999999999999998888764 1 21
Q ss_pred -ccC----------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 -SFG----------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 -~vg----------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+ .+.+..+++.+.++|||||++++....
T Consensus 234 P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 234 PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 011 124778999999999999998876654
No 169
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.72 E-value=1.4e-05 Score=80.29 Aligned_cols=78 Identities=13% Similarity=0.080 Sum_probs=62.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------------ccC-cccHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR------------SFG-HEYME 452 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------------~vg-~~~~~ 452 (525)
+.+|||+| ++.+|++..++|+++|+|++.++.++++++..|++++ |+ .++ ...-.
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~~ 205 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRTH 205 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSGG
T ss_pred CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCcHH
Confidence 35999999 8888886447999999999999999999999999876 43 122 22335
Q ss_pred HHHHHHHhccCCCcEEEEEEecC
Q 043102 453 EFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
.|+..+.++|||||.+.++..+.
T Consensus 206 ~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 206 EFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEeeec
Confidence 67888889999999998887653
No 170
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.72 E-value=1.1e-05 Score=83.32 Aligned_cols=121 Identities=14% Similarity=0.148 Sum_probs=80.7
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHH----HcCCCCC----Cc--------ccCcccHHHHH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVK----EADLERN----DR--------SFGHEYMEEFF 455 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~----~~gl~d~----D~--------~vg~~~~~~~f 455 (525)
.+||||| +..+++++ +++++++|+ +++++.|++.-. ...+.+. |. ++..+....++
T Consensus 211 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l 289 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFL 289 (372)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHH
T ss_pred CEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHH
Confidence 4999999 77788764 789999999 999988875310 0001001 33 23333445999
Q ss_pred HHHHhccCCCcEEEEEEecCCCcchhc----ccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 456 GCCESLIAKDGLFVLQFISIPDERYNE----FRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~~~~~~~~----~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++.++|||||+++|.++..++..... .....++... .++++...+.+++.+.++++ ||+++-..
T Consensus 290 ~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~t~~e~~~ll~~a-Gf~~~~~~ 358 (372)
T 1fp1_D 290 SNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMF-ITVGGRERTEKQYEKLSKLS-GFSKFQVA 358 (372)
T ss_dssp HHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHH-HHHSCCCEEHHHHHHHHHHT-TCSEEEEE
T ss_pred HHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHH-hccCCccCCHHHHHHHHHHC-CCceEEEE
Confidence 999999999999999988776543110 0011111111 14677888999999999995 99876554
No 171
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.72 E-value=2.8e-05 Score=78.49 Aligned_cols=75 Identities=17% Similarity=0.344 Sum_probs=55.1
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC---CCC-C------Cc-----------------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD---LER-N------DR----------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g---l~d-~------D~----------------- 444 (525)
.+||||| +.++++.. ..+|++||+|+++++.|++++...+ +.+ + |.
T Consensus 85 ~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D 164 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISD 164 (294)
T ss_dssp CEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEEC
T ss_pred CEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEEC
Confidence 4999999 67888764 4699999999999999999976531 222 1 22
Q ss_pred ---ccCcc-cH--HHHHHHHHhccCCCcEEEEEEe
Q 043102 445 ---SFGHE-YM--EEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 ---~vg~~-~~--~~~f~~i~r~LkpGG~~viq~i 473 (525)
..+.. .+ ..|++.+.++|||||+++++..
T Consensus 165 ~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp C----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 11211 12 7899999999999999999874
No 172
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.72 E-value=5e-05 Score=74.38 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=68.9
Q ss_pred cccccchhccccCC-Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------
Q 043102 385 LDESLTYSCALFKV-REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------DR------ 444 (525)
Q Consensus 385 Ld~~m~ys~a~f~~-~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------ 444 (525)
|+++++....+.+. .+||||| ++.+|+.. ..+|+++|+|++.++.|+++++..|++++ |.
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 8 LSKRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp CCHHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 34444333344433 3999999 88888863 34899999999999999999999999875 22
Q ss_pred ----------ccCcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 ----------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ----------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
-+|-.-...++....+.|+++|++++|.+.
T Consensus 88 ~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 88 ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 224455788899999999999999999864
No 173
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.68 E-value=8.9e-06 Score=76.47 Aligned_cols=100 Identities=13% Similarity=0.113 Sum_probs=64.1
Q ss_pred CCeehhhc--HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC--Cc-----ccCcccHHHHHHHHHhccCCCcEE
Q 043102 398 VREVIFLG--TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--DR-----SFGHEYMEEFFGCCESLIAKDGLF 468 (525)
Q Consensus 398 ~~rVLDIG--a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--D~-----~vg~~~~~~~f~~i~r~LkpGG~~ 468 (525)
..+||||| .-.++...+++|+|+|+|++.+......+.+..+.+. |. .+...+...+++++.++|||||++
T Consensus 68 ~~~vLDiG~G~G~~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp TSCEEEETCTTCHHHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEE
T ss_pred CCeEEEECCcCCHHHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEE
Confidence 35999999 2222333468999999999821111100111111111 44 122467899999999999999999
Q ss_pred EEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEE
Q 043102 469 VLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLA 521 (525)
Q Consensus 469 viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~ 521 (525)
++.+... ..++..++.+.++++ ||++...
T Consensus 148 ~i~~~~~-----------------------~~~~~~~~~~~l~~~-Gf~~~~~ 176 (215)
T 2zfu_A 148 KVAEVSS-----------------------RFEDVRTFLRAVTKL-GFKIVSK 176 (215)
T ss_dssp EEEECGG-----------------------GCSCHHHHHHHHHHT-TEEEEEE
T ss_pred EEEEcCC-----------------------CCCCHHHHHHHHHHC-CCEEEEE
Confidence 9975421 113889999999995 9988654
No 174
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.68 E-value=7.7e-06 Score=82.82 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=71.4
Q ss_pred Ceehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHH------cC--------CCCC--Cc---ccCcccHH
Q 043102 399 REVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKE------AD--------LERN--DR---SFGHEYME 452 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~------~g--------l~d~--D~---~vg~~~~~ 452 (525)
.+||||| +..++++ |+ +|+|||+|++|++++.++-.. .. +... |. .+....+.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~ 165 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISLN 165 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCGG
T ss_pred cEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhHH
Confidence 3899999 6677775 65 999999999999996542111 01 1111 22 12233568
Q ss_pred HHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCC-------CHHHHHHHHHhcCCcEEEEEEec
Q 043102 453 EFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLP-------SLSRITSAMSAASRLWYNLAVST 524 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LP-------sl~~i~~~~~~a~gl~V~~~~~~ 524 (525)
..++++.|+|||||++++- ..| .|+. ....+.+ +|.+. ++.++.+.++++ ||.+.-...|
T Consensus 166 ~vL~e~~rvLkpGG~lv~l--vkP--qfe~---~~~~~~~----~G~vrd~~~~~~~~~~v~~~~~~~-Gf~v~~~~~s 232 (291)
T 3hp7_A 166 LILPALAKILVDGGQVVAL--VKP--QFEA---GREQIGK----NGIVRESSIHEKVLETVTAFAVDY-GFSVKGLDFS 232 (291)
T ss_dssp GTHHHHHHHSCTTCEEEEE--ECG--GGTS---CGGGCC-----CCCCCCHHHHHHHHHHHHHHHHHT-TEEEEEEEEC
T ss_pred HHHHHHHHHcCcCCEEEEE--ECc--cccc---ChhhcCC----CCccCCHHHHHHHHHHHHHHHHHC-CCEEEEEEEC
Confidence 8999999999999999884 222 2332 1222222 23322 556778788875 9998766543
No 175
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.67 E-value=1.9e-05 Score=86.59 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=59.4
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC-CCC------------------Cc--------c
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL-ERN------------------DR--------S 445 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl-~d~------------------D~--------~ 445 (525)
.|||||| +..+|+. |++|||||+|+++++.|+.++++.|. ... |. |
T Consensus 68 ~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~eh 146 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHH 146 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHH
T ss_pred CeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhc
Confidence 3999999 8888985 99999999999999999999988763 111 44 4
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEEEecCCCc
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQFISIPDE 478 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~ 478 (525)
|.....-.....+.+.|+++|..++.+|...+.
T Consensus 147 v~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 147 IVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp HHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred CCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 432221233456777899999999988887664
No 176
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.66 E-value=8.4e-05 Score=74.71 Aligned_cols=114 Identities=9% Similarity=-0.024 Sum_probs=73.5
Q ss_pred eehhhc--------HHHHHHh--cCCEEEEEcCChHHHHHHHHHHHHcCC----------CC-----------C--C--c
Q 043102 400 EVIFLG--------TIEVVKR--TGCKYTGITLAEKQLKYAGIKVKEADL----------ER-----------N--D--R 444 (525)
Q Consensus 400 rVLDIG--------a~~lA~~--~G~~VtGIdlS~eql~~Ar~r~~~~gl----------~d-----------~--D--~ 444 (525)
+||||| ..+++++ .+++|++||+|++|++.||+++...+. .+ . | .
T Consensus 81 q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~ 160 (277)
T 3giw_A 81 QFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTR 160 (277)
T ss_dssp EEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTS
T ss_pred EEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCC
Confidence 899999 3556554 589999999999999999999854321 11 0 2 1
Q ss_pred -----------ccCcc-cHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHh
Q 043102 445 -----------SFGHE-YMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSA 512 (525)
Q Consensus 445 -----------~vg~~-~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~ 512 (525)
++... .....++++.+.|+|||++++...+..... +......+..+.---| ..+-|.+|+.+.++
T Consensus 161 p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~~~~~~~g~p-~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 161 PVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVAREYAARNMP-MRLRTHAEAEEFFE- 237 (277)
T ss_dssp CCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHHHHHHHTTCC-CCCCCHHHHHHTTT-
T ss_pred cchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHHHHHHhcCCC-CccCCHHHHHHHhC-
Confidence 23222 257899999999999999999887754321 1001111222221113 35568888887773
Q ss_pred cCCcEE
Q 043102 513 ASRLWY 518 (525)
Q Consensus 513 a~gl~V 518 (525)
||++
T Consensus 238 --Glel 241 (277)
T 3giw_A 238 --GLEL 241 (277)
T ss_dssp --TSEE
T ss_pred --CCcc
Confidence 7875
No 177
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.65 E-value=1.4e-05 Score=76.46 Aligned_cols=74 Identities=7% Similarity=0.038 Sum_probs=58.5
Q ss_pred CCeehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc-------ccCc
Q 043102 398 VREVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR-------SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~-------~vg~ 448 (525)
..+||||| |+.++.. .+++|+++|+|++|++.|+++++..|+.++ |. |.-
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHlL- 128 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVL- 128 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHHH-
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHhh-
Confidence 34999999 7776654 478999999999999999999999998753 33 111
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
++.+..+.++.+.|||||.|+-..
T Consensus 129 ~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 129 KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 444555668999999999998765
No 178
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.65 E-value=3e-05 Score=79.27 Aligned_cols=75 Identities=9% Similarity=0.135 Sum_probs=59.8
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------Cc-------ccC---
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN--------------DR-------SFG--- 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------D~-------~vg--- 447 (525)
.+||||| ++.+++.. +++|+|+|+|+++++.|+++++..++..+ |. |.|
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g~~~ 277 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQT 277 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSSSHH
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccCccC
Confidence 4999999 77778763 47999999999999999999988776533 22 222
Q ss_pred -cccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 448 -HEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 448 -~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
......+++++.++|||||++++..-
T Consensus 278 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 278 SLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 23568899999999999999998654
No 179
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.64 E-value=6.1e-06 Score=79.27 Aligned_cols=107 Identities=8% Similarity=0.001 Sum_probs=69.6
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----C------------cccCcccHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----D------------RSFGHEYMEE 453 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D------------~~vg~~~~~~ 453 (525)
+..+||||| +..+++..+++|+|+|+|+++++.|+++++..|+.+- | ..+...-...
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPK 170 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHHH
Confidence 344999999 7777876458999999999999999999988776432 2 1010001122
Q ss_pred HHHHHHhccCCCcEEEEEEecCCC-cchhcc-cCchhHHhhcccCCCCCCCH
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPD-ERYNEF-RLSSDFMKEYIFPGGCLPSL 503 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~-~~~~~~-~~~~~fi~kYIFPGg~LPsl 503 (525)
+.+++.++|||||++++....... ...... +....|..+.++|..+.|-.
T Consensus 171 ~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~p~~ 222 (235)
T 1jg1_A 171 IPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPLI 222 (235)
T ss_dssp CCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEETTEEEEEEEEEECCCBCB
T ss_pred HHHHHHHhcCCCcEEEEEEecCCCccEEEEEEEeCCeEEEEEeccEEEEEcc
Confidence 345889999999999996654322 111111 12345666667776666653
No 180
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.64 E-value=3e-05 Score=79.22 Aligned_cols=120 Identities=9% Similarity=0.072 Sum_probs=79.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHH----HcCC-C---CCCc--------ccCcccHHHHH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVK----EADL-E---RNDR--------SFGHEYMEEFF 455 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~----~~gl-~---d~D~--------~vg~~~~~~~f 455 (525)
.+||||| +..+++++ +++|+++|+ +++++.|++.-. ...+ + .-|. ++.......++
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l 268 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRIL 268 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHH
Confidence 4999999 77788764 789999999 999998875310 0011 1 0144 23334445999
Q ss_pred HHHHhccCC---CcEEEEEEecCCCcchh----cccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 456 GCCESLIAK---DGLFVLQFISIPDERYN----EFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 456 ~~i~r~Lkp---GG~~viq~i~~~~~~~~----~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++.++||| ||+++|.+...++.... ......++.. ..+. +...+.+++.+.++++ ||+++-..
T Consensus 269 ~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~-g~~~t~~e~~~ll~~a-Gf~~~~~~ 339 (352)
T 1fp2_A 269 KKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNM-ACLN-GKERNEEEWKKLFIEA-GFQHYKIS 339 (352)
T ss_dssp HHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHG-GGGT-CCCEEHHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHH-Hhcc-CCCCCHHHHHHHHHHC-CCCeeEEE
Confidence 999999999 99999998876653210 0000111111 1133 6677999999999995 99876543
No 181
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.64 E-value=4.7e-05 Score=79.63 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=61.3
Q ss_pred cCCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc-------
Q 043102 396 FKVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN-----------------DR------- 444 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~------- 444 (525)
|++.+||||| ++.+|+ .|+ +|+|||.|+ +++.|++.++..|++++ |.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 5566999999 677776 475 899999995 89999999999998876 21
Q ss_pred --ccCcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 --SFGHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 --~vg~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
..+...++.++....++|||||+++-+..
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 12355789999999999999999875543
No 182
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.64 E-value=7.4e-05 Score=73.77 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=63.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc----------------ccCcc
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------DR----------------SFGHE 449 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~----------------~vg~~ 449 (525)
.+||||| ++.+|+.. ..+|+++|+|+..++.|+++++..|+.++ |. -+|.+
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~ 102 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGT 102 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCchH
Confidence 4999999 78888863 34899999999999999999999999775 22 22445
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEec
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
-...++....+.|+++|++++|.+.
T Consensus 103 lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 103 LIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp HHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 5788999999999999999999764
No 183
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.63 E-value=3.6e-05 Score=75.96 Aligned_cols=77 Identities=13% Similarity=0.029 Sum_probs=60.1
Q ss_pred CCCeehhhc------HHHHHHh--cCCEEEEEcCChHHHHHHHHHHHHc-CCCCC----------------Cc-ccCccc
Q 043102 397 KVREVIFLG------TIEVVKR--TGCKYTGITLAEKQLKYAGIKVKEA-DLERN----------------DR-SFGHEY 450 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~--~G~~VtGIdlS~eql~~Ar~r~~~~-gl~d~----------------D~-~vg~~~ 450 (525)
+..+|||+| ++.+++. .+++|+|+|+|+++++.|+++++.. |+..- |. .....+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~~~~ 189 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIADIPD 189 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEECCSC
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEcCcC
Confidence 345999999 6777775 2789999999999999999999877 64211 22 123345
Q ss_pred HHHHHHHHHhccCCCcEEEEEEe
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i 473 (525)
...+++++.++|||||++++.+.
T Consensus 190 ~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 190 PWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp GGGSHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHcCCCCEEEEEeC
Confidence 67899999999999999998764
No 184
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.62 E-value=7.3e-05 Score=78.51 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=61.7
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----Cc-------------------ccC-
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----DR-------------------SFG- 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----D~-------------------~vg- 447 (525)
..+|||+| ++.+|+. |++|+|+|+|+++++.|+++++..|+.++ |. ...
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 45999999 8888875 89999999999999999999998887643 22 111
Q ss_pred --------cccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 448 --------HEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 448 --------~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
.+.+..+++.+.++|||||++++.+.+.
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2356789999999999999998765543
No 185
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.62 E-value=4.5e-05 Score=75.09 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=60.7
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------C-----------c-ccCccc
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------D-----------R-SFGHEY 450 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D-----------~-~vg~~~ 450 (525)
+..+|||+| ++.+++.. +++|+++|+|+++++.|+++++..++.++ | . .....+
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~~ 191 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPD 191 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCSC
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCcC
Confidence 345999999 67778763 68999999999999999999988776332 2 2 123345
Q ss_pred HHHHHHHHHhccCCCcEEEEEEe
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i 473 (525)
...+++++.++|||||++++...
T Consensus 192 ~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 192 PWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp GGGTHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHHHcCCCCEEEEEeC
Confidence 56899999999999999998653
No 186
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.62 E-value=3.7e-05 Score=71.40 Aligned_cols=77 Identities=12% Similarity=0.174 Sum_probs=57.3
Q ss_pred CCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHc-CC------------CCC--Cc--------ccC
Q 043102 398 VREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEA-DL------------ERN--DR--------SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~-gl------------~d~--D~--------~vg 447 (525)
..+||||| +..+++. |. +|+|+|+|+++++.|+++++.. .+ .+. |. ++.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CCeEEEECCCCcHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 34999999 6777775 55 9999999999999999987531 11 000 22 111
Q ss_pred -------------cccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 448 -------------HEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 448 -------------~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
..+...+++++.++|||||++++.+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 2356899999999999999999987654
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.59 E-value=5.8e-05 Score=76.86 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=58.8
Q ss_pred cCCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc----cc
Q 043102 396 FKVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------------------DR----SF 446 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~----~v 446 (525)
.+..+||||| ++.+++. |+ +|+|||+| ++++.|++++++.|+.++ |. .+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 3455999999 7777775 65 99999999 699999999998887654 11 11
Q ss_pred -----CcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 447 -----GHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 447 -----g~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.....+.+++++.++|||||+++.+.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~ 145 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFPDK 145 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEEee
Confidence 23457899999999999999998543
No 188
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.58 E-value=4e-05 Score=78.79 Aligned_cols=74 Identities=15% Similarity=0.213 Sum_probs=56.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHc--CCCC-C--------------------Cc----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEA--DLER-N--------------------DR---- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~--gl~d-~--------------------D~---- 444 (525)
.+||||| ++.++++. +++|++||+|+++++.|+++++.. |+.+ + |.
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d 201 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVD 201 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEEC
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEEC
Confidence 4999999 77788764 579999999999999999987642 3321 1 22
Q ss_pred ---ccCccc---HHHHHHHHHhccCCCcEEEEEE
Q 043102 445 ---SFGHEY---MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 ---~vg~~~---~~~~f~~i~r~LkpGG~~viq~ 472 (525)
..+... ...+++.+.++|||||+++++.
T Consensus 202 ~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 202 SSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 112111 5799999999999999999984
No 189
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.55 E-value=4.2e-05 Score=77.46 Aligned_cols=76 Identities=18% Similarity=0.279 Sum_probs=55.9
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH--cCCC-CC------Cc------------------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE--ADLE-RN------DR------------------ 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~--~gl~-d~------D~------------------ 444 (525)
.+||||| +++++++. ..+|++||+|+++++.|++++.. .++. .+ |+
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~ 176 (304)
T 2o07_A 97 RKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDS 176 (304)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECC
Confidence 4999999 77777763 47999999999999999999765 3442 22 21
Q ss_pred --ccCc---ccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 --SFGH---EYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 --~vg~---~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+.+. -...++++.+.++|||||+++++...
T Consensus 177 ~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 177 SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp C-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 1111 13468999999999999999998754
No 190
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.55 E-value=0.00012 Score=73.09 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=57.2
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc------cc---C----------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR------SF---G---------- 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~------~v---g---------- 447 (525)
.+||||| ++.+++..+++|+|+|+|+++++.|+++++..|+.++ |. .+ .
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPPyi~ 204 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVK 204 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCCBC
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCCCCC
Confidence 4899999 6777765578999999999999999999999888754 32 11 0
Q ss_pred c----------c---------cHHHHHHHHH-hccCCCcEEEEE
Q 043102 448 H----------E---------YMEEFFGCCE-SLIAKDGLFVLQ 471 (525)
Q Consensus 448 ~----------~---------~~~~~f~~i~-r~LkpGG~~viq 471 (525)
. + +-..+++++. +.|||||++++.
T Consensus 205 ~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 205 SSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 0 0 0017899999 999999999983
No 191
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.54 E-value=5.4e-05 Score=75.04 Aligned_cols=79 Identities=14% Similarity=0.066 Sum_probs=63.1
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc------------cc-CcccHH
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----DR------------SF-GHEYME 452 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~------------~v-g~~~~~ 452 (525)
+.+|||+| ++.+|++. +++|+|||+|+++++.|+++++..|+.+. |. .+ ......
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~~~~ 199 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHKTH 199 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCSSGG
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcccHH
Confidence 35999999 88888863 56999999999999999999998877532 22 11 123677
Q ss_pred HHHHHHHhccCCCcEEEEEEecCC
Q 043102 453 EFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.+++++.++|||||++++.+....
T Consensus 200 ~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 200 KFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred HHHHHHHHHcCCCCEEEEEEcCcc
Confidence 899999999999999999877543
No 192
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.54 E-value=6.4e-05 Score=74.05 Aligned_cols=74 Identities=8% Similarity=0.196 Sum_probs=58.0
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cccc------C-
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN----------------DRSF------G- 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~~v------g- 447 (525)
..+||||| ++.+++.. +++|+|+|+|+++++.|+++++..|+..- |..+ +
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDE 189 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBCT
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCCCc
Confidence 34999999 77777654 68999999999999999999988776421 1100 0
Q ss_pred ------------------------cccHHHHHHHHHhccCCCcEEEEE
Q 043102 448 ------------------------HEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 448 ------------------------~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
...+..+++.+.++|||||++++.
T Consensus 190 ~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 190 QDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 135688999999999999999985
No 193
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.54 E-value=7.9e-05 Score=76.26 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=57.0
Q ss_pred eehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------------Cc-------c
Q 043102 400 EVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN--------------------DR-------S 445 (525)
Q Consensus 400 rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------------D~-------~ 445 (525)
+||||| +.+++++ .+++|++||+|+++++.|++++.... ..+ |. +
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 899999 7788874 48899999999999999999874311 111 22 1
Q ss_pred cCc-cc--HHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 446 FGH-EY--MEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 446 vg~-~~--~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.+. .. ..+||+.++++|||||+++++.....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~ 204 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHS 204 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECT
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 111 11 27899999999999999999987543
No 194
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.54 E-value=3.2e-05 Score=73.27 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=66.5
Q ss_pred CCeehhhc------HHHHHHhcC--CEEEEEcCChHHHHHHHHHHHHcCC----CCC------C------------c-cc
Q 043102 398 VREVIFLG------TIEVVKRTG--CKYTGITLAEKQLKYAGIKVKEADL----ERN------D------------R-SF 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G--~~VtGIdlS~eql~~Ar~r~~~~gl----~d~------D------------~-~v 446 (525)
..+||||| +..+++..| ++|+|+|+|+++++.|+++++..|+ .++ | . .+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 157 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHV 157 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEE
Confidence 35999999 677777644 7999999999999999999887553 111 2 2 11
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEecCCC-cchhccc--CchhHHhhcccCCCCCCCH
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFISIPD-ERYNEFR--LSSDFMKEYIFPGGCLPSL 503 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~~~~-~~~~~~~--~~~~fi~kYIFPGg~LPsl 503 (525)
. .....+++++.++|||||++++...+... ....... ....|..+.+++..+.|-.
T Consensus 158 ~-~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~ 216 (226)
T 1i1n_A 158 G-AAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLT 216 (226)
T ss_dssp C-SBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEECCCBCC
T ss_pred C-CchHHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceEEEecc
Confidence 1 11234567899999999999996544322 1111111 1223444555655555544
No 195
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.54 E-value=4.6e-05 Score=77.64 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=53.2
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHc--CC-CCC------Cc------------------
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEA--DL-ERN------DR------------------ 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~--gl-~d~------D~------------------ 444 (525)
.+||||| ++.+++.. +.+|++||+|+++++.|+++++.. ++ ..+ |+
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~ 189 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDS 189 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECC
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcC
Confidence 4999999 67777753 579999999999999999998653 33 122 22
Q ss_pred --ccCc-cc-H-HHHHHHHHhccCCCcEEEEEE
Q 043102 445 --SFGH-EY-M-EEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 --~vg~-~~-~-~~~f~~i~r~LkpGG~~viq~ 472 (525)
+++. .. + ..+++.+.++|||||+++++.
T Consensus 190 ~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 190 SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 1111 11 2 799999999999999999986
No 196
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.53 E-value=0.00024 Score=80.87 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=56.8
Q ss_pred CCeehhhc------HHHHHHhcC--CEEEEEcCChHHHHHHHHHHHHc------CCCC---------------C--Cc--
Q 043102 398 VREVIFLG------TIEVVKRTG--CKYTGITLAEKQLKYAGIKVKEA------DLER---------------N--DR-- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G--~~VtGIdlS~eql~~Ar~r~~~~------gl~d---------------~--D~-- 444 (525)
..+||||| ++.+++..+ ++|+|||+|++|++.|+++++.. ++.. . |.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 44999999 777777532 79999999999999999987642 2210 0 33
Q ss_pred ------ccCcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 ------SFGHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
|+.......+++++.++|||| .+++.+..
T Consensus 802 ~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 802 CLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 455555668999999999999 77776653
No 197
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.53 E-value=1.5e-05 Score=75.70 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=53.8
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC-CC-------C-----C--CcccCcccHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD-LE-------R-----N--DRSFGHEYMEEFF 455 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g-l~-------d-----~--D~~vg~~~~~~~f 455 (525)
+..+||||| +..+++. +++|+|+|+|+++++.|+++++..+ +. + . |..+...-...+.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 148 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL 148 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHH
Confidence 345999999 6777775 6999999999999999999986543 10 0 0 2201000011223
Q ss_pred HHHHhccCCCcEEEEEEecC
Q 043102 456 GCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq~i~~ 475 (525)
+++.++|||||++++.....
T Consensus 149 ~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 149 CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp HHHHHTEEEEEEEEEEECSS
T ss_pred HHHHHHcCCCcEEEEEEcCC
Confidence 57999999999999976543
No 198
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.53 E-value=6.1e-05 Score=76.44 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=57.0
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH--cC-CC-CC-------------------Cc----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE--AD-LE-RN-------------------DR---- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~--~g-l~-d~-------------------D~---- 444 (525)
.+||||| +.+++++. +.+|++||+|+++++.|++++.+ .+ ++ .+ |.
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIID 158 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEEC
Confidence 4999999 77777753 57999999999999999998764 23 21 11 22
Q ss_pred ---cc---Cc-c--cHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 ---SF---GH-E--YMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ---~v---g~-~--~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+. +. . ...++++.+.++|||||+++++...
T Consensus 159 ~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 159 LTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp CCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 22 21 1 1479999999999999999998643
No 199
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.51 E-value=6.3e-05 Score=73.91 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=57.5
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH---cCCCCC------Cc-----------------
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE---ADLERN------DR----------------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~---~gl~d~------D~----------------- 444 (525)
..+||||| ++.++++. +++|+|||+|+++++.|+++++. .+++++ |.
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 34999999 77788774 68999999999999999999877 665432 11
Q ss_pred --cc------------------------CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 445 --SF------------------------GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 445 --~v------------------------g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.+ +...+..+++.+.++|||||++++-
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 00 0123778999999999999999873
No 200
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.51 E-value=4.2e-05 Score=70.86 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=21.3
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
.+|||+| ++.+++.. +++|+|+|+|+++++.|+++++..++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 79 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA 79 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------
T ss_pred CEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC
Confidence 4999999 77778764 67999999999999999999876654
No 201
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.50 E-value=5.9e-05 Score=72.55 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=58.4
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHc-CCCCC-----Cc-------------ccCcc
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEA-DLERN-----DR-------------SFGHE 449 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~-gl~d~-----D~-------------~vg~~ 449 (525)
+..+|||+| +..+++.. +++|+++|+|+++++.|+++++.. |...- |. .+...
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 175 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDLM 175 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEESS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECCc
Confidence 345999999 67777763 689999999999999999998876 62211 22 11233
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
+...+++++.++|||||++++..
T Consensus 176 ~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 176 EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEEe
Confidence 45689999999999999999865
No 202
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.50 E-value=7.1e-05 Score=71.62 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=55.4
Q ss_pred CCeehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcC--------CCC----C------Cc---ccC-c
Q 043102 398 VREVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEAD--------LER----N------DR---SFG-H 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~g--------l~d----~------D~---~vg-~ 448 (525)
..+||||| +..+|+..| .+|+|||+|+++++.|+++++... ..+ . |. ++. .
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~ 154 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQP 154 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECCCST
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEecCCh
Confidence 45999999 778888755 799999999999999999875421 111 0 22 222 2
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.....+++++.++|||||++++.
T Consensus 155 ~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 155 NQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHhCCCCcEEEEE
Confidence 23478899999999999999996
No 203
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.50 E-value=0.0003 Score=72.48 Aligned_cols=173 Identities=12% Similarity=0.072 Sum_probs=87.1
Q ss_pred HHhccceeeeccEEEEEecCCCceeeCccCCcccEE-EEeCCCceEeCCEEEEecChHHHHHhhcCCC----CHHHHhhc
Q 043102 79 ESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCT-VVCGDGSREFYNSCVMALHAPDALKILGNQA----TFDETRTG 153 (525)
Q Consensus 79 ~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~-v~~~~g~~e~fD~VV~A~hadqAL~lL~~~~----t~~E~~iL 153 (525)
++.|+++.++..+.++..+++ ++. |++. |++..+|.||+|+++..+.+||.+.+ ..+.++-|
T Consensus 207 ~~~G~~i~~~~~V~~i~~~~~------------~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 273 (425)
T 3ka7_A 207 SANGGKIHTGQEVSKILIENG------------KAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMV 273 (425)
T ss_dssp HHTTCEEECSCCEEEEEEETT------------EEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHH
T ss_pred HHcCCEEEECCceeEEEEECC------------EEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHh
Confidence 334677777777766655321 233 4443 66788999999999999999997432 34444555
Q ss_pred cCCc-----eeEeccCCCCCCCCCC----Cccccc-cccC--CCCCCCCCCCCCeE---EEcC-----------------
Q 043102 154 GAFH-----DIFLHCDKNSMPQNPA----AWSAWS-FLGS--LDSKNLGETSLPYL---VTLN----------------- 201 (525)
Q Consensus 154 g~f~-----~~vlHtD~s~mP~~~~----aWaswN-y~~~--~~~~nl~~~~~~~f---vTLN----------------- 201 (525)
..++ .+.+--|....+.... .+...+ +... .++ .+.+.+++++ +...
T Consensus 274 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~p-~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 352 (425)
T 3ka7_A 274 GTLQPSAGIKICLAADEPLVGHTGVLLTPYTRRINGVNEVTQADP-ELAPPGKHLTMCHQYVAPENVKNLESEIEMGLED 352 (425)
T ss_dssp HHCCCBEEEEEEEEESSCSSCSSSEEECCSSSSEEEEECGGGTCG-GGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHH
T ss_pred hCcCCCceEEEEeecCCCccCcCEEEECCChhhcceEEeccCCCC-CcCCCCCeEEEEEeccccccccchHHHHHHHHHH
Confidence 5555 3333334432211100 000000 0000 011 1111122322 1111
Q ss_pred -----CCCCCcc-eeeEEEecCCCCCHHHHHHHHHhhhhcCCCCeEEeccCCCC--C-CchhhhchHHHHHhhhcC
Q 043102 202 -----PDHAPEH-TLLKWSTGPPVPFVAASKASLELGHIQGRRGIWFRGAYQGY--G-FHEDGLKDLSINSCMTYG 268 (525)
Q Consensus 202 -----p~~~p~~-il~~~~y~HPv~~~~a~~aq~~l~~iqG~~~~~fcGay~g~--G-fHEdg~~Sgl~aA~~llG 268 (525)
|...++. .+.+|...-|++.+... ......-+-.|+|+||+|+.- | --|+++.||++||++|+|
T Consensus 353 l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~---~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 353 LKEIFPGKRYEVLLIQSYHDEWPVNRAASG---TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHSTTCCEEEEEEEEEBTTBCSBSSCTT---CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred HHHhCCCCceEEEEEEEECCCccccccccC---CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 1101111 22355555577665510 011111123589999999854 3 489999999999999976
No 204
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.49 E-value=0.00063 Score=67.53 Aligned_cols=170 Identities=12% Similarity=0.141 Sum_probs=99.9
Q ss_pred ccHHHHHHHh--ccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEe-CCEEEEecChHHHHHhhcCCCCHH
Q 043102 72 PNMMELFESL--GVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREF-YNSCVMALHAPDALKILGNQATFD 148 (525)
Q Consensus 72 Pn~~~~~~~~--gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~-fD~VV~A~hadqAL~lL~~~~t~~ 148 (525)
+.|..+.+.+ |+++..+....++..+ + .+|.|.+.+|.... +|.||+|+.+.++.+++.. .+.
T Consensus 107 ~~~~~l~~~l~~g~~i~~~~~v~~i~~~-----------~-~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~--~~~ 172 (336)
T 1yvv_A 107 PGMSAITRAMRGDMPVSFSCRITEVFRG-----------E-EHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAA--APK 172 (336)
T ss_dssp SCTHHHHHHHHTTCCEECSCCEEEEEEC-----------S-SCEEEEETTSCEEEEESEEEECSCHHHHGGGGTT--CHH
T ss_pred ccHHHHHHHHHccCcEEecCEEEEEEEe-----------C-CEEEEEeCCCcCccccCEEEEcCCHHHHHHhhcc--CHH
Confidence 4566666666 6776666665555431 1 26888888887664 9999999999999999973 344
Q ss_pred HHhhccCCc-----eeEeccCCCCC--------CCCCCCccccccccCCCCCCCCCCCC-C-eEEEcC------------
Q 043102 149 ETRTGGAFH-----DIFLHCDKNSM--------PQNPAAWSAWSFLGSLDSKNLGETSL-P-YLVTLN------------ 201 (525)
Q Consensus 149 E~~iLg~f~-----~~vlHtD~s~m--------P~~~~aWaswNy~~~~~~~nl~~~~~-~-~fvTLN------------ 201 (525)
-...+..+. .+.+..+...- +..+.+|- +..+..+ ... .. . +.++..
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~p--~~~-~~~~~~v~~~~~~~~~~~~~~~~ 246 (336)
T 1yvv_A 173 LASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDSPLDWL---ARNRSKP--ERD-DTLDTWILHATSQWSRQNLDASR 246 (336)
T ss_dssp HHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSSSEEEE---EEGGGST--TCC-CSSEEEEEEECHHHHHHTTTSCH
T ss_pred HHHHHhhcCccceeEEEEEecCCCCCCCCeEEeCCCceeEE---EecCcCC--CCC-CCCcEEEEEeCHHHHHHHHhCCH
Confidence 456667766 34444443211 11112221 1110000 000 00 0 111111
Q ss_pred ----------------CCC-CCcc-eeeEEEecCCCCCHHHHHHHHHhhhhcCCCCeEEeccCCCCCCchhhhchHHHHH
Q 043102 202 ----------------PDH-APEH-TLLKWSTGPPVPFVAASKASLELGHIQGRRGIWFRGAYQGYGFHEDGLKDLSINS 263 (525)
Q Consensus 202 ----------------p~~-~p~~-il~~~~y~HPv~~~~a~~aq~~l~~iqG~~~~~fcGay~g~GfHEdg~~Sgl~aA 263 (525)
... +|.. ...+|.|..|.+..... .......++++||+|+.-+--|+|+.||.++|
T Consensus 247 ~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~------~~~~~~~rl~laGDa~~g~gv~~a~~sg~~lA 320 (336)
T 1yvv_A 247 EQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWG------ALSDADLGIYVCGDWCLSGRVEGAWLSGQEAA 320 (336)
T ss_dssp HHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCS------CEEETTTTEEECCGGGTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCC------eeecCCCCEEEEecCCCCCCHHHHHHHHHHHH
Confidence 000 1221 45688888777654321 11234689999999998889999999999999
Q ss_pred hhhc
Q 043102 264 CMTY 267 (525)
Q Consensus 264 ~~ll 267 (525)
+.|+
T Consensus 321 ~~l~ 324 (336)
T 1yvv_A 321 RRLL 324 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9883
No 205
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.49 E-value=3.3e-05 Score=75.00 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=54.7
Q ss_pred CCeehhhc------HHHHHHh-----cCCEEEEEcCChHHHHHHHHHHHH-----c-CCC--------C-C-Cc---ccC
Q 043102 398 VREVIFLG------TIEVVKR-----TGCKYTGITLAEKQLKYAGIKVKE-----A-DLE--------R-N-DR---SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~-----~G~~VtGIdlS~eql~~Ar~r~~~-----~-gl~--------d-~-D~---~vg 447 (525)
..+||||| ++.+|+. .+++|+|||+|+++++.|+..... . ..+ + . |. ..+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 35999999 6777775 379999999999999988732100 0 001 1 1 33 113
Q ss_pred cccHHHHHHHHHh-ccCCCcEEEEEEe
Q 043102 448 HEYMEEFFGCCES-LIAKDGLFVLQFI 473 (525)
Q Consensus 448 ~~~~~~~f~~i~r-~LkpGG~~viq~i 473 (525)
+.+++.+++++.+ +|||||+++++.+
T Consensus 162 ~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 HANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4578999999997 9999999999765
No 206
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.48 E-value=0.00092 Score=69.19 Aligned_cols=170 Identities=9% Similarity=0.045 Sum_probs=85.3
Q ss_pred HHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHHhhcC-CCCHHHHhhccCCc
Q 043102 79 ESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALKILGN-QATFDETRTGGAFH 157 (525)
Q Consensus 79 ~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~-~~t~~E~~iLg~f~ 157 (525)
+..|+++.++..+.++..+ + .++ |. .+|++..+|.||+|+++.++.+||+. ....+-.+.|..++
T Consensus 200 ~~~G~~i~~~~~V~~i~~~----------~--~~v-V~-~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~ 265 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIE----------E--KKV-YT-RDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIE 265 (421)
T ss_dssp HTTTCEEESSCCEEEEETT----------T--TEE-EE-TTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCC
T ss_pred HHCCCEEEcCCeEEEEEEE----------C--CEE-EE-eCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCC
Confidence 3346777766666666432 1 145 54 56677889999999999999999973 23334444555555
Q ss_pred -----eeEeccCCCCCCC-------CCCCccccccccCCCCCCCCCCCCCeE-EE-cCCCCC----------------Cc
Q 043102 158 -----DIFLHCDKNSMPQ-------NPAAWSAWSFLGSLDSKNLGETSLPYL-VT-LNPDHA----------------PE 207 (525)
Q Consensus 158 -----~~vlHtD~s~mP~-------~~~aWaswNy~~~~~~~nl~~~~~~~f-vT-LNp~~~----------------p~ 207 (525)
.+.+--|....+. +.. .....+....++ ++.+.++.++ +. .-|... |.
T Consensus 266 ~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~~i~~~s~~~p-~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~ 343 (421)
T 3nrn_A 266 PSEGIKFNLAVPGEPRIGNTIVFTPGLM-INGFNEPSALDK-SLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPE 343 (421)
T ss_dssp CCCEEEEEEEEESSCSSCSSEEECTTSS-SCEEECGGGTCG-GGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTT
T ss_pred CCceEEEEEEEcCCcccCCeEEEcCCcc-eeeEeccCCCCC-CcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCC
Confidence 3444444432221 111 000000000011 1111112211 11 111111 11
Q ss_pred -ce--eeEEEecCCCCCHHHHHHHHHhhhhcCCCCeEEeccCCCCC-Cc--hhhhchHHHHHhhhcCCc
Q 043102 208 -HT--LLKWSTGPPVPFVAASKASLELGHIQGRRGIWFRGAYQGYG-FH--EDGLKDLSINSCMTYGEE 270 (525)
Q Consensus 208 -~i--l~~~~y~HPv~~~~a~~aq~~l~~iqG~~~~~fcGay~g~G-fH--Edg~~Sgl~aA~~llG~~ 270 (525)
.+ +.+|.-.-|++..... ..+. ... .++|+||+|+.-+ .- |.++.||.+||+.| |..
T Consensus 344 ~~~~~~~~~~~~~p~~~~~~~---~~~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l-~~~ 406 (421)
T 3nrn_A 344 GEPLLAQVYRDGNPVNRTRAG---LHIE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL-NLG 406 (421)
T ss_dssp CEEEEEEEC----------------CCC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT-TSC
T ss_pred CeEEEeeeccCCCCcccccCC---CCCC-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh-CcC
Confidence 11 2344334455422210 1244 444 8999999998766 56 99999999999999 776
No 207
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.47 E-value=0.00014 Score=73.68 Aligned_cols=79 Identities=11% Similarity=0.114 Sum_probs=60.5
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc--------
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR-------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~-------- 444 (525)
..+|||+| +..+|+.. +++|+|+|+|+++++.|+++++..|+..- |.
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 35999999 77888763 48999999999999999999988877421 22
Q ss_pred ccCc----c----------------cHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 445 SFGH----E----------------YMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 445 ~vg~----~----------------~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
..|. + ....+++++.++|||||++++.+.+..
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 1120 0 125889999999999999999776553
No 208
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.46 E-value=7.3e-05 Score=73.14 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=59.4
Q ss_pred CCCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHc-C-CCCC------C------------c-ccC
Q 043102 397 KVREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEA-D-LERN------D------------R-SFG 447 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~-g-l~d~------D------------~-~vg 447 (525)
+..+||||| +..+++.. +.+|+++|+|+++++.|+++++.. | +.++ | . .+.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD 178 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC
Confidence 345999999 67777753 689999999999999999998876 4 3222 2 2 112
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+...+++++.++|||||++++.+.+
T Consensus 179 ~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 179 MLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp SSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 234558999999999999999997654
No 209
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.46 E-value=7.5e-05 Score=74.35 Aligned_cols=75 Identities=23% Similarity=0.396 Sum_probs=56.1
Q ss_pred Ceehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHc--CCCC-C------Cc------------------
Q 043102 399 REVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEA--DLER-N------DR------------------ 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~--gl~d-~------D~------------------ 444 (525)
.+||||| +++++++.+ .+|++||+|+++++.|++++... ++.+ + |+
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~ 156 (275)
T 1iy9_A 77 EHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDS 156 (275)
T ss_dssp CEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESC
T ss_pred CEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECC
Confidence 4999999 677777644 79999999999999999987542 3422 2 32
Q ss_pred --ccCcc---cHHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 --SFGHE---YMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 --~vg~~---~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
+.+.. .-.++++.+.++|||||+++++..
T Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 157 TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 11110 136899999999999999999854
No 210
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.44 E-value=0.00098 Score=71.21 Aligned_cols=79 Identities=9% Similarity=-0.025 Sum_probs=54.1
Q ss_pred HHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHHhhcC-CCCHHHHhhccCCc
Q 043102 79 ESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALKILGN-QATFDETRTGGAFH 157 (525)
Q Consensus 79 ~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~~-~~t~~E~~iLg~f~ 157 (525)
+.+|+++.++..+.++..+ . .+|.|.+.+|++..+|+||+|+++.++.+|+.+ ......++.+..+.
T Consensus 223 ~~lg~~i~~~~~V~~i~~~--------~----~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~ 290 (520)
T 1s3e_A 223 DLLGDRVKLERPVIYIDQT--------R----ENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVP 290 (520)
T ss_dssp HHHGGGEESSCCEEEEECS--------S----SSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCC
T ss_pred HHcCCcEEcCCeeEEEEEC--------C----CeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCC
Confidence 3446777666666666331 1 257888888888899999999999998888742 12344456677766
Q ss_pred -----eeEeccCCCCCC
Q 043102 158 -----DIFLHCDKNSMP 169 (525)
Q Consensus 158 -----~~vlHtD~s~mP 169 (525)
.+++.-|..+.+
T Consensus 291 ~~~~~kv~l~~~~~~w~ 307 (520)
T 1s3e_A 291 LGSVIKCIVYYKEPFWR 307 (520)
T ss_dssp BCCEEEEEEECSSCGGG
T ss_pred CcceEEEEEEeCCCccc
Confidence 577776765543
No 211
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.44 E-value=0.00016 Score=69.15 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHc-CC-------CC---------C-Cc---cc-C
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEA-DL-------ER---------N-DR---SF-G 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~-gl-------~d---------~-D~---~v-g 447 (525)
..+||||| +..++++. +++|+|||+|++|++.+.++++.. ++ .+ . |. ++ .
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~~ 157 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQ 157 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCCC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCCC
Confidence 45999999 77888774 489999999999888888777652 11 11 0 22 11 2
Q ss_pred cccHHHHHHHHHhccCCCcEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
......+++++.++|||||++++.
T Consensus 158 ~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 158 PDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccHHHHHHHHHHHHcCCCeEEEEE
Confidence 333466789999999999999994
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.43 E-value=7.2e-05 Score=76.31 Aligned_cols=76 Identities=21% Similarity=0.271 Sum_probs=56.8
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH--cCCCC-C------C-------------c-----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE--ADLER-N------D-------------R----- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~--~gl~d-~------D-------------~----- 444 (525)
.+||||| +++++++. +.+|+++|+|+++++.|+++++. .++++ + | .
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~ 197 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 197 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECC
Confidence 4999999 77777753 58999999999999999998765 23311 1 2 2
Q ss_pred --ccCc-cc-H-HHHHHHHHhccCCCcEEEEEEec
Q 043102 445 --SFGH-EY-M-EEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 --~vg~-~~-~-~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+++. .. + .++++.+.++|||||+++++...
T Consensus 198 ~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 198 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 1121 11 2 79999999999999999998643
No 213
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.43 E-value=6.7e-05 Score=75.50 Aligned_cols=75 Identities=21% Similarity=0.361 Sum_probs=55.4
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH--cCCCC-C------C-------------c-----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE--ADLER-N------D-------------R----- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~--~gl~d-~------D-------------~----- 444 (525)
.+||||| ++.++++. ..+|++||+|+++++.|+++++. .++.+ + | .
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 171 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDS 171 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcC
Confidence 4999999 77777764 47999999999999999998754 23311 1 2 2
Q ss_pred --c-cCcc---cHHHHHHHHHhccCCCcEEEEEEe
Q 043102 445 --S-FGHE---YMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 --~-vg~~---~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
+ ++.. ...++++.+.++|||||+++++..
T Consensus 172 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 172 TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp ----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 1 2110 237899999999999999999854
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.42 E-value=0.00021 Score=70.72 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=60.5
Q ss_pred CCeehhhc------HHHHHHhc-C-CEEEEEcCChHHHHHHHHHHHHcCCCCC---------------------Cc----
Q 043102 398 VREVIFLG------TIEVVKRT-G-CKYTGITLAEKQLKYAGIKVKEADLERN---------------------DR---- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G-~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------------D~---- 444 (525)
..+|||+| +..+|+.. + ++|+|+|+|+++++.++++++..|+..- |.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 45999999 77788753 4 7999999999999999999998887421 22
Q ss_pred ----ccCc----------------ccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 445 ----SFGH----------------EYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 445 ----~vg~----------------~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
..|. +....+++.+.++|||||++++.+.+.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 1121 345789999999999999999977655
No 215
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.39 E-value=0.00031 Score=71.88 Aligned_cols=75 Identities=19% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc-----------------ccC
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN-----DR-----------------SFG 447 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~-----------------~vg 447 (525)
+.+|||+| ++++|... +++|+|+|+|+++++.|+++++.+|++.- |. -.|
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg 283 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHG 283 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSC
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCc
Confidence 34899999 77888753 48999999999999999999999998621 22 011
Q ss_pred ---------cccHHHHHHHHHhccCCCcEEEEEE
Q 043102 448 ---------HEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 448 ---------~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
...+..+++++.++|||||++++-+
T Consensus 284 ~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 284 LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1225789999999999999999854
No 216
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.39 E-value=0.0003 Score=72.77 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=57.0
Q ss_pred CCCeehhhc-----HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc---------------c----c
Q 043102 397 KVREVIFLG-----TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN-----DR---------------S----F 446 (525)
Q Consensus 397 ~~~rVLDIG-----a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~---------------~----v 446 (525)
+..+||||| ++.+++.. +.+|+|+|+|+++++.|++++++.|+..- |. . .
T Consensus 172 ~~~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 172 ENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 345999998 77777652 36999999999999999999988776311 21 0 1
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+......+++++.++|||||++++-++.
T Consensus 252 ~~~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 252 TLEAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SHHHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred chHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 2223578999999999999965444443
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.39 E-value=0.00011 Score=73.12 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=55.2
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--CC-------CC-C------Cc------------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--DL-------ER-N------DR------------ 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--gl-------~d-~------D~------------ 444 (525)
.+||||| +++++++...+|++||+|+++++.|++++ +. ++ .+ + |+
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD~ 155 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFDV 155 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEEE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCeeE
Confidence 4999999 67777763369999999999999999987 43 33 21 2 22
Q ss_pred -------ccCc-cc--HHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 -------SFGH-EY--MEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 -------~vg~-~~--~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+.+. .. ..++++.+.++|||||+++++...
T Consensus 156 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 156 IIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 1111 12 378999999999999999998643
No 218
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.38 E-value=4.1e-05 Score=74.53 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=54.3
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC-----CCC-----C--CcccCcccHHHHHHHH
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD-----LER-----N--DRSFGHEYMEEFFGCC 458 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g-----l~d-----~--D~~vg~~~~~~~f~~i 458 (525)
..+||||| +..+++.. |++|+|+|+|+++++.|+++..... ..+ . |..+. .....+++++
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~-~~~~~~l~~~ 164 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIR-IYAPCKAEEL 164 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEE-ESCCCCHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEE-eCChhhHHHH
Confidence 34999999 77788764 7899999999999999998753211 110 0 33110 1113568999
Q ss_pred HhccCCCcEEEEEEec
Q 043102 459 ESLIAKDGLFVLQFIS 474 (525)
Q Consensus 459 ~r~LkpGG~~viq~i~ 474 (525)
.++|||||++++.+..
T Consensus 165 ~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 165 ARVVKPGGWVITATPG 180 (269)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HHhcCCCcEEEEEEcC
Confidence 9999999999997654
No 219
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.38 E-value=0.00018 Score=75.01 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=59.9
Q ss_pred CCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCC-C------Cc-------------------
Q 043102 398 VREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLER-N------DR------------------- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d-~------D~------------------- 444 (525)
+.+|||+| ++.+|+. |+ +|+|||+|+++++.|+++++..|+++ + |.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 45999999 7888875 65 99999999999999999999988864 3 21
Q ss_pred ---ccC---------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 ---SFG---------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ---~vg---------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+ .+.+.++++.+.++|||||++++.+..
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 111 134666788999999999999987653
No 220
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.38 E-value=0.00032 Score=67.31 Aligned_cols=79 Identities=9% Similarity=0.008 Sum_probs=62.4
Q ss_pred Ceehhhc----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC--CCC------Cc--c-------------------
Q 043102 399 REVIFLG----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL--ERN------DR--S------------------- 445 (525)
Q Consensus 399 ~rVLDIG----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl--~d~------D~--~------------------- 445 (525)
.+||||| ++.+|+..+++|++|+.+++..+.|++.++++|+ .++ |+ .
T Consensus 32 ~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~ 111 (202)
T 3cvo_A 32 EVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYP 111 (202)
T ss_dssp SEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHH
T ss_pred CEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHh
Confidence 3899999 7888874479999999999999999999999998 544 31 0
Q ss_pred ----------------cCcccHHHHHHHHHhccCCCcEEEEEEecCCC
Q 043102 446 ----------------FGHEYMEEFFGCCESLIAKDGLFVLQFISIPD 477 (525)
Q Consensus 446 ----------------vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~ 477 (525)
+.-+....++..+.++|+|||+++++.++...
T Consensus 112 ~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~DNv~~r~ 159 (202)
T 3cvo_A 112 LAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLFDDYSQRR 159 (202)
T ss_dssp HGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEETTGGGCS
T ss_pred hhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEEeCCcCCc
Confidence 11123458888889999999999998865543
No 221
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.38 E-value=3.6e-05 Score=72.95 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=65.5
Q ss_pred CCCeehhhc------HHHHHHhcC------CEEEEEcCChHHHHHHHHHHHHcCC----CCC------Cc----------
Q 043102 397 KVREVIFLG------TIEVVKRTG------CKYTGITLAEKQLKYAGIKVKEADL----ERN------DR---------- 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G------~~VtGIdlS~eql~~Ar~r~~~~gl----~d~------D~---------- 444 (525)
+..+||||| +..+++..+ ++|+|+|+|+++++.|++++++.++ ..+ |.
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 345999999 677777644 6999999999999999999987763 111 22
Q ss_pred -------ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcc-cCchhHHhhcccCCCCCC
Q 043102 445 -------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEF-RLSSDFMKEYIFPGGCLP 501 (525)
Q Consensus 445 -------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~-~~~~~fi~kYIFPGg~LP 501 (525)
.+. .....+++.+.++|||||++++.......+..... +....|..+.+++-.+.|
T Consensus 160 ~~~fD~I~~~-~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 223 (227)
T 2pbf_A 160 LGLFDAIHVG-ASASELPEILVDLLAENGKLIIPIEEDYTQVLYEITKKNGKIIKDRLFDVCFVS 223 (227)
T ss_dssp HCCEEEEEEC-SBBSSCCHHHHHHEEEEEEEEEEEEETTEEEEEEEECSCC-CEEEEEEEECCCB
T ss_pred CCCcCEEEEC-CchHHHHHHHHHhcCCCcEEEEEEccCCceEEEEEEEeCCeEEEEEeccEEEEe
Confidence 111 11124568899999999999997654322221111 122345445555444443
No 222
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.36 E-value=0.00015 Score=68.77 Aligned_cols=74 Identities=18% Similarity=0.269 Sum_probs=54.2
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHc-CC-------CC---------C-Cc---ccCc
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEA-DL-------ER---------N-DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~-gl-------~d---------~-D~---~vg~ 448 (525)
..+|||+| ++.+++.. +++|+|+|+|+++++.+++++++. ++ .+ . |. ....
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~ 153 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQ 153 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCS
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCCC
Confidence 45999999 77888764 379999999999999999887543 11 11 0 22 1122
Q ss_pred cc-HHHHHHHHHhccCCCcEEEEE
Q 043102 449 EY-MEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~-~~~~f~~i~r~LkpGG~~viq 471 (525)
.+ ...+++++.++|||||++++.
T Consensus 154 ~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 154 PTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 345699999999999999987
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.35 E-value=0.00011 Score=73.47 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=55.9
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC--CCC-C-------------------Cc-----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD--LER-N-------------------DR----- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g--l~d-~-------------------D~----- 444 (525)
.+||||| +.++++.. +.+|++||+|+++++.|++++...+ +++ + |.
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 159 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 159 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcC
Confidence 4999999 66777653 5799999999999999999875421 211 1 22
Q ss_pred --ccCcc-cH--HHHHHHHHhccCCCcEEEEEEe
Q 043102 445 --SFGHE-YM--EEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 --~vg~~-~~--~~~f~~i~r~LkpGG~~viq~i 473 (525)
+.+.. .. .++++.+.++|||||+++++..
T Consensus 160 ~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 160 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 12221 22 7999999999999999999864
No 224
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.35 E-value=0.0002 Score=69.26 Aligned_cols=38 Identities=5% Similarity=-0.184 Sum_probs=31.5
Q ss_pred Ceehhhc------HHHHHHh---cCCEEEEEcCChHHHHHHHHHHHH
Q 043102 399 REVIFLG------TIEVVKR---TGCKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~---~G~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
.+|||+| ++.+++. .+++|+|+|+|+++++.|++++..
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 3999999 6777765 268999999999999999976543
No 225
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.34 E-value=8.4e-05 Score=76.05 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=80.0
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHH----HcCC----CCCCc--------ccCcccHHHHH
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVK----EADL----ERNDR--------SFGHEYMEEFF 455 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~----~~gl----~d~D~--------~vg~~~~~~~f 455 (525)
.+||||| +..+++++ +++++++|+ +++++.|++.-. ...+ ..-|. ++..+....++
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l 273 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKIL 273 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHHHHHHHH
Confidence 4999999 77778764 689999999 688887775200 0001 00144 23333455999
Q ss_pred HHHHhccCC---CcEEEEEEecCCCcchh----cccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 456 GCCESLIAK---DGLFVLQFISIPDERYN----EFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 456 ~~i~r~Lkp---GG~~viq~i~~~~~~~~----~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
+++.++||| ||+++|.+...++.... ......++..- ..+++...+.+++.+.++++ ||+++-..
T Consensus 274 ~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~-~~~~g~~~t~~e~~~ll~~a-Gf~~~~~~ 345 (358)
T 1zg3_A 274 KNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVML-TMFLGKERTKQEWEKLIYDA-GFSSYKIT 345 (358)
T ss_dssp HHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHH-HHHSCCCEEHHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHh-ccCCCCCCCHHHHHHHHHHc-CCCeeEEE
Confidence 999999999 99999988776643210 01111122111 14677888999999999995 99876554
No 226
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.34 E-value=0.0001 Score=74.78 Aligned_cols=77 Identities=12% Similarity=0.101 Sum_probs=56.9
Q ss_pred CCCeehhhc------HHHHHHhcC--CEEEEEcCChHHHHHHHHHHHHcC----------CCCC----------------
Q 043102 397 KVREVIFLG------TIEVVKRTG--CKYTGITLAEKQLKYAGIKVKEAD----------LERN---------------- 442 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G--~~VtGIdlS~eql~~Ar~r~~~~g----------l~d~---------------- 442 (525)
+..+||||| ++.+++..| ++|+|+|+|+++++.|+++++..| +.++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 345999999 677787644 899999999999999999987532 1111
Q ss_pred ----Cc-ccCcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 443 ----DR-SFGHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 443 ----D~-~vg~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
|. .+.......+++++.++|||||++++...
T Consensus 185 ~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 185 SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ---EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 22 11223344589999999999999997654
No 227
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.34 E-value=0.00043 Score=68.65 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=54.1
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcC-ChHHHHHHHHHH-----HHcCCC----CC-----------------
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITL-AEKQLKYAGIKV-----KEADLE----RN----------------- 442 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdl-S~eql~~Ar~r~-----~~~gl~----d~----------------- 442 (525)
+..+||||| ++.+++. |+ +|+|+|+ |+++++.|++++ +..++. ++
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 345999999 6777774 76 9999999 899999999998 554432 11
Q ss_pred -------Cccc------CcccHHHHHHHHHhccC---C--CcEEEEE
Q 043102 443 -------DRSF------GHEYMEEFFGCCESLIA---K--DGLFVLQ 471 (525)
Q Consensus 443 -------D~~v------g~~~~~~~f~~i~r~Lk---p--GG~~viq 471 (525)
|..+ ..++...+++.+.++|| | ||++++-
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 2211 24568899999999999 9 9998774
No 228
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.31 E-value=1.7e-05 Score=75.72 Aligned_cols=75 Identities=11% Similarity=0.102 Sum_probs=53.2
Q ss_pred CCeehhhc------HHHHHHhcC-------CEEEEEcCChHHHHHHHHHHHHcC-----CCCC-----------------
Q 043102 398 VREVIFLG------TIEVVKRTG-------CKYTGITLAEKQLKYAGIKVKEAD-----LERN----------------- 442 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G-------~~VtGIdlS~eql~~Ar~r~~~~g-----l~d~----------------- 442 (525)
..+||||| +..+++..+ .+|+|+|+|+++++.|++++++.+ ...-
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 164 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPY 164 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSE
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCc
Confidence 35999999 667777544 599999999999999999987654 1110
Q ss_pred Cc-ccCcccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 443 DR-SFGHEYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 443 D~-~vg~~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
|. .+. .-...+.+++.++|||||++++...
T Consensus 165 D~I~~~-~~~~~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 165 NAIHVG-AAAPDTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEEC-SCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred cEEEEC-CchHHHHHHHHHHhcCCCEEEEEEe
Confidence 22 111 0112345889999999999998654
No 229
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.29 E-value=0.00034 Score=72.83 Aligned_cols=78 Identities=15% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC------Cc-----------------cc
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN------DR-----------------SF 446 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~-----------------~v 446 (525)
++.+|||+| ++.+|+. |+ +|+|+|+|+++++.|+++++..|+.++ |. .+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 345999999 7888875 66 999999999999999999998887532 21 11
Q ss_pred Cc--------------ccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 447 GH--------------EYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 447 g~--------------~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
.. +.+..++..+.++|||||++++.+...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 11 457789999999999999998876543
No 230
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.27 E-value=0.00022 Score=71.95 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=53.5
Q ss_pred Ceehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHH--cCCCC-C--------------------Cc----
Q 043102 399 REVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKE--ADLER-N--------------------DR---- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~--~gl~d-~--------------------D~---- 444 (525)
.+||||| +..+++.. ..+|++||+|+++++.|++++.. .++.+ + |.
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d 176 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIID 176 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEEC
Confidence 4999999 77777754 57999999999999999998742 11111 1 22
Q ss_pred ---ccCc-ccH--HHHHHHHHhccCCCcEEEEEEe
Q 043102 445 ---SFGH-EYM--EEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 445 ---~vg~-~~~--~~~f~~i~r~LkpGG~~viq~i 473 (525)
+.+. ..+ .++++.+.++|||||+++++.-
T Consensus 177 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 177 TTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp CC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 1111 111 6899999999999999999853
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.26 E-value=5.3e-05 Score=75.14 Aligned_cols=74 Identities=15% Similarity=0.045 Sum_probs=54.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH--cCCCC-C------Cc----------ccCcccHHH
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE--ADLER-N------DR----------SFGHEYMEE 453 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~--~gl~d-~------D~----------~vg~~~~~~ 453 (525)
.+||||| +.+++++ +.+|++||+|+++++.|++++.. .++.+ + |+ .+...+...
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~dp~~ 152 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQEPDIH 152 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSCCCHH
T ss_pred CEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCCChHH
Confidence 4999999 6667776 69999999999999999987643 12221 1 22 111222235
Q ss_pred HHHHHHhccCCCcEEEEEEe
Q 043102 454 FFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i 473 (525)
|++.+.++|||||+++++.-
T Consensus 153 ~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEcC
Confidence 99999999999999999853
No 232
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.21 E-value=0.00038 Score=72.24 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=61.3
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----Cc-----------------cc---
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----DR-----------------SF--- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----D~-----------------~v--- 446 (525)
+.+|||+| ++.+|+. +.+|+|+|+|+++++.|+++++..|+++. |. .+
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 34899999 7888886 78999999999999999999988887532 21 11
Q ss_pred --C---------cccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 447 --G---------HEYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 447 --g---------~~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
+ .+.+..+++.+.++|||||++++.+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 1457789999999999999999876543
No 233
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.14 E-value=0.00061 Score=73.12 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=60.0
Q ss_pred Ceehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc------c--
Q 043102 399 REVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN-----------------DR------S-- 445 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~------~-- 445 (525)
.+|||+| ++.+|+.. +++|+++|+|+++++.|+++++..|+... |. .
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSG 182 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCC
Confidence 4999999 77888763 37999999999999999999998887511 22 1
Q ss_pred cCc--------------------ccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 446 FGH--------------------EYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 446 vg~--------------------~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.|. .....+++.+.++|||||+++..+.+..
T Consensus 183 ~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 183 EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 010 0127789999999999999998776553
No 234
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.12 E-value=0.0023 Score=67.50 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=41.6
Q ss_pred eeEEEecCCCCCHHHHHHHHHhhh-hcCCCCeEEeccCCC--C--CCchhhhchHHHHHhhhc
Q 043102 210 LLKWSTGPPVPFVAASKASLELGH-IQGRRGIWFRGAYQG--Y--GFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 210 l~~~~y~HPv~~~~a~~aq~~l~~-iqG~~~~~fcGay~g--~--GfHEdg~~Sgl~aA~~ll 267 (525)
+.+|.+.-|+|+....+..+++.. ++. .||++||-+-. | +--+.+++||+.||+.|+
T Consensus 415 v~r~~~ayP~y~~~~~~~~~~~~~~l~~-~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~ 476 (513)
T 4gde_A 415 HRRFDHGYPTPTLEREGTLTQILPKLQD-KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIV 476 (513)
T ss_dssp EEEEEEEEECCBTTHHHHHHHHHHHHHH-TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEECCCeecccCHhHHHHHHHHHHHHhh-cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHH
Confidence 447888899999887665544433 444 58999995432 2 345779999999999985
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.11 E-value=0.00065 Score=70.76 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=61.3
Q ss_pred CCCeehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcCC-CCC------Cc-----------------c
Q 043102 397 KVREVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEADL-ERN------DR-----------------S 445 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~gl-~d~------D~-----------------~ 445 (525)
+..+|||+| ++.+|+. | .+|+|||+|+++++.|+++++..|+ .++ |. .
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 345999999 7888875 5 4999999999999999999998888 532 22 1
Q ss_pred cC--------------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 446 FG--------------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 446 vg--------------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+. .+.+..++..+.++|||||++++.+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11 156789999999999999999987654
No 236
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.07 E-value=0.0006 Score=76.70 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=61.0
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC-CC------Cc------------------
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE-RN------DR------------------ 444 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~-d~------D~------------------ 444 (525)
++.+|||+| ++.+|+. |+ +|++||+|+++++.|+++++..|++ ++ |.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 334999999 7888874 66 6999999999999999999999987 33 21
Q ss_pred -ccC-----------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 -SFG-----------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 -~vg-----------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+ .+.+..+++.+.++|||||++++.+-.
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 111 246778899999999999999976543
No 237
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.07 E-value=0.0017 Score=68.62 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=42.2
Q ss_pred eeeEEEecCCCCCHHHHHHHHHhhh-hcCCCCeEEeccCCCCCCchhhhchHHHHHhhhc
Q 043102 209 TLLKWSTGPPVPFVAASKASLELGH-IQGRRGIWFRGAYQGYGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 209 il~~~~y~HPv~~~~a~~aq~~l~~-iqG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~ll 267 (525)
...+|...-|.|++........+.. .+...+++|||+|+..+.-|+++.||.+||+.++
T Consensus 431 ~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il 490 (504)
T 1sez_A 431 NHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVI 490 (504)
T ss_dssp EEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHH
T ss_pred EEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHH
Confidence 3457776667777765433333322 2335789999999986678999999999999985
No 238
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.06 E-value=0.00039 Score=69.57 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=52.1
Q ss_pred Ceehhhc----------HHHHHHhc-----CCEEEEEcCChHHHHHHHHHHHH-----------------------cC--
Q 043102 399 REVIFLG----------TIEVVKRT-----GCKYTGITLAEKQLKYAGIKVKE-----------------------AD-- 438 (525)
Q Consensus 399 ~rVLDIG----------a~~lA~~~-----G~~VtGIdlS~eql~~Ar~r~~~-----------------------~g-- 438 (525)
.+|||+| |+.+++.. +++|+|+|+|+++++.|++.+-. .|
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 3999999 34456542 36999999999999999987410 01
Q ss_pred ----------------CCC-------C-Cc--------ccCcccHHHHHHHHHhccCCCcEEEE
Q 043102 439 ----------------LER-------N-DR--------SFGHEYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 439 ----------------l~d-------~-D~--------~vg~~~~~~~f~~i~r~LkpGG~~vi 470 (525)
+.+ . |. ++..+.....++++.+.|||||.+++
T Consensus 187 ~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred eechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 111 1 32 33445668999999999999999987
No 239
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.06 E-value=0.00022 Score=64.90 Aligned_cols=96 Identities=10% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCCeehhhcHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc-----------CC---CCC--Cc-----ccC-c-ccHHH
Q 043102 397 KVREVIFLGTIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA-----------DL---ERN--DR-----SFG-H-EYMEE 453 (525)
Q Consensus 397 ~~~rVLDIGa~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~-----------gl---~d~--D~-----~vg-~-~~~~~ 453 (525)
+..+|||||.- .| +||+|++|++.|+++.... .. .+. |. .+. . .+...
T Consensus 12 ~g~~vL~~~~g--------~v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~ 82 (176)
T 2ld4_A 12 AGQFVAVVWDK--------SS-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE 82 (176)
T ss_dssp TTSEEEEEECT--------TS-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHH
T ss_pred CCCEEEEecCC--------ce-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHH
Confidence 34589998821 02 3999999999999986421 11 111 44 111 2 56799
Q ss_pred HHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEE
Q 043102 454 FFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYN 519 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~ 519 (525)
++++++|+|||||++++....... .. +..+..+.+++.+.++++ || |.
T Consensus 83 ~l~~~~r~LkpgG~l~~~~~~~~~-----~~-----------~~~~~~~~~~~~~~l~~a-Gf-i~ 130 (176)
T 2ld4_A 83 ILAEIARILRPGGCLFLKEPVETA-----VD-----------NNSKVKTASKLCSALTLS-GL-VE 130 (176)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEESS-----SC-----------SSSSSCCHHHHHHHHHHT-TC-EE
T ss_pred HHHHHHHHCCCCEEEEEEcccccc-----cc-----------cccccCCHHHHHHHHHHC-CC-cE
Confidence 999999999999999995332111 00 012345789999999985 88 55
No 240
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.04 E-value=0.00087 Score=72.13 Aligned_cols=78 Identities=12% Similarity=0.151 Sum_probs=59.9
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc------c
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR------S 445 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~------~ 445 (525)
..+|||+| +..+|+.. +++|+++|+|+++++.++++++..|+..- |. .
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 45999999 78888764 47999999999999999999998876421 22 1
Q ss_pred --cCc--------------------ccHHHHHHHHHhccCCCcEEEEEEecC
Q 043102 446 --FGH--------------------EYMEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 446 --vg~--------------------~~~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
.|. .....+++.+.++|||||++++.+.+.
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 110 013478999999999999999977655
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.00 E-value=0.00066 Score=69.35 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=61.1
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc----------ccC-cccHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------DR----------SFG-HEYMEEF 454 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~----------~vg-~~~~~~~ 454 (525)
+.+|||+| ++. |+ .+++|+|+|+|+++++.|+++++..|+.++ |. .+. ......+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~~~~~~ 273 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKFAHKF 273 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTTTGGGG
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcHhHHHH
Confidence 34899999 677 76 478999999999999999999999888644 33 111 2344588
Q ss_pred HHHHHhccCCCcEEEEEEecCC
Q 043102 455 FGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 455 f~~i~r~LkpGG~~viq~i~~~ 476 (525)
++.+.++|+|||++++.+....
T Consensus 274 l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 274 IDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp HHHHHHHEEEEEEEEEEEEESS
T ss_pred HHHHHHHcCCCCEEEEEEeecC
Confidence 9999999999999999877543
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.96 E-value=0.00093 Score=71.54 Aligned_cols=78 Identities=12% Similarity=0.172 Sum_probs=59.9
Q ss_pred Ceehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc------c-
Q 043102 399 REVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR------S- 445 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~------~- 445 (525)
.+|||+| ++.+|+.. +++|+++|+|+++++.++++++..|+.+- |. .
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCS 186 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCS 186 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCC
T ss_pred CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCC
Confidence 4999999 77788753 47999999999999999999999887532 22 0
Q ss_pred -cCc--------------------ccHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 446 -FGH--------------------EYMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 446 -vg~--------------------~~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.|. .....+++.+.++|||||+++..+.+..
T Consensus 187 g~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 187 GEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp CGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 110 1123789999999999999998776653
No 243
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.94 E-value=0.0013 Score=68.61 Aligned_cols=77 Identities=10% Similarity=0.031 Sum_probs=49.8
Q ss_pred HHhccceeeeccEEEEEecCCCceeeCccCCccc-EEEEeCCCceEeCCEEEEecChHHHHHhhcC-CCCHHHHhhccCC
Q 043102 79 ESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSS-CTVVCGDGSREFYNSCVMALHAPDALKILGN-QATFDETRTGGAF 156 (525)
Q Consensus 79 ~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~g-v~v~~~~g~~e~fD~VV~A~hadqAL~lL~~-~~t~~E~~iLg~f 156 (525)
+.+|+++.++..+.++..+. .+ |.|.+ +|++..+|+||+|+++..+.+|+.+ ..+...++.+..+
T Consensus 223 ~~lg~~i~~~~~V~~i~~~~------------~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~ 289 (453)
T 2yg5_A 223 EALGDDVFLNAPVRTVKWNE------------SGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQ 289 (453)
T ss_dssp HHHGGGEECSCCEEEEEEET------------TEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGE
T ss_pred HhcCCcEEcCCceEEEEEeC------------CceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcC
Confidence 34466777776666664321 14 67776 6667889999999999988887742 2344555666666
Q ss_pred c-----eeEeccCCCCC
Q 043102 157 H-----DIFLHCDKNSM 168 (525)
Q Consensus 157 ~-----~~vlHtD~s~m 168 (525)
. .+.+.-|..+.
T Consensus 290 ~~~~~~kv~l~~~~~~w 306 (453)
T 2yg5_A 290 SLGLVIKVHAVYETPFW 306 (453)
T ss_dssp EECCEEEEEEEESSCGG
T ss_pred CCcceEEEEEEECCCCC
Confidence 5 55565565443
No 244
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.89 E-value=0.017 Score=60.70 Aligned_cols=59 Identities=19% Similarity=0.072 Sum_probs=42.9
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhhc---CCCCHHHHhhccCCc-----eeEeccCCCCCCC
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKILG---NQATFDETRTGGAFH-----DIFLHCDKNSMPQ 170 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~---~~~t~~E~~iLg~f~-----~~vlHtD~s~mP~ 170 (525)
+|.|++.+|.+..+|+||+|+++..+.++|. ...++..++.+..+. .+++.-|..+.+.
T Consensus 246 ~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 246 GVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp CEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred cEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence 6889999998889999999999998888663 222444455555555 6677777766554
No 245
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.76 E-value=0.0022 Score=62.59 Aligned_cols=74 Identities=14% Similarity=0.199 Sum_probs=47.7
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHc-CC----------------CCC-Cc---ccCc
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEA-DL----------------ERN-DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~-gl----------------~d~-D~---~vg~ 448 (525)
+.+|||+| +..+|+.. .++|+|+|+|++|++...+.+++. ++ ... |. .+..
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 45999999 66777652 579999999999875544444321 11 001 33 2223
Q ss_pred ccHHH-HHHHHHhccCCCcEEEEE
Q 043102 449 EYMEE-FFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~-~f~~i~r~LkpGG~~viq 471 (525)
.+... +.+.+.++|||||++++.
T Consensus 157 ~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 34444 455666799999999985
No 246
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.72 E-value=0.0023 Score=68.01 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=60.0
Q ss_pred CCeehhhc------HHHHHHhc-C-CEEEEEcCChHHHHHHHHHHHHcCCCCC-------------------Cc------
Q 043102 398 VREVIFLG------TIEVVKRT-G-CKYTGITLAEKQLKYAGIKVKEADLERN-------------------DR------ 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G-~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------------D~------ 444 (525)
..+|||+| +..+++.. + ++|+++|+|+++++.++++++..|+..- |.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 34999999 77788754 3 7999999999999999999988776321 11
Q ss_pred --ccCc----c---------c-------HHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 445 --SFGH----E---------Y-------MEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 445 --~vg~----~---------~-------~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
..|. + + ...+++.+.++|||||++++.+.+..
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 1110 1 1 16789999999999999998777654
No 247
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.71 E-value=0.0026 Score=67.14 Aligned_cols=55 Identities=9% Similarity=-0.028 Sum_probs=41.6
Q ss_pred cEEEEeCCC---ceEeCCEEEEecChHHHHHhhcCCCCHHHHhhccCCc-----eeEeccCCCC
Q 043102 112 SCTVVCGDG---SREFYNSCVMALHAPDALKILGNQATFDETRTGGAFH-----DIFLHCDKNS 167 (525)
Q Consensus 112 gv~v~~~~g---~~e~fD~VV~A~hadqAL~lL~~~~t~~E~~iLg~f~-----~~vlHtD~s~ 167 (525)
+|.|.+.+| ....||+||+|+++..+.+|+. ..++.+++.|..++ .+++.-|..+
T Consensus 269 ~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~-~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 269 GVTVEYTAGGSKKSITADYAICTIPPHLVGRLQN-NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp EEEEEEEETTEEEEEEESEEEECSCHHHHTTSEE-CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred eEEEEEecCCeEEEEECCEEEECCCHHHHHhCcc-CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 677877766 4678999999999997766765 46777888888776 6666666544
No 248
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.67 E-value=0.002 Score=67.97 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=60.2
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCCCC------------------Cc------c-
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLERN------------------DR------S- 445 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------------------D~------~- 445 (525)
..+|||+| +..+++.. +++|+++|+|+++++.++++++..|+... |. .
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCS 326 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCC
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCC
Confidence 45999999 77888764 37999999999999999999988776322 22 0
Q ss_pred -cCc----c----------------cHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 446 -FGH----E----------------YMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 446 -vg~----~----------------~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.|. + ....+++.+.++|||||++++.+.+..
T Consensus 327 g~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred cccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 110 1 125889999999999999999876553
No 249
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.65 E-value=0.0055 Score=55.78 Aligned_cols=95 Identities=18% Similarity=0.128 Sum_probs=60.0
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHH--HcCCCC----C--Cc-------c--------cCc
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVK--EADLER----N--DR-------S--------FGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~--~~gl~d----~--D~-------~--------vg~ 448 (525)
..+||||| ++.++++ + +|+|||+|+++++. ..++. ...+.+ . |. + .+.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~-~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~~~~ 100 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES-HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPIIGGG 100 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT-CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTTTBCC
T ss_pred CCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc-ccCCeEEECChhhhcccCCCCEEEECCCCccCCccccccCC
Confidence 45999999 7777775 6 99999999999988 11110 000100 0 33 1 111
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhhcccCCCCCCCHHHHHHHHHhcCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKEYIFPGGCLPSLSRITSAMSAASRLWYNLAV 522 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~kYIFPGg~LPsl~~i~~~~~~a~gl~V~~~~ 522 (525)
.....+++++.+.| |||++++..... ....++.+.++++ ||++....
T Consensus 101 ~~~~~~~~~~~~~l-pgG~l~~~~~~~-------------------------~~~~~l~~~l~~~-gf~~~~~~ 147 (170)
T 3q87_B 101 YLGREVIDRFVDAV-TVGMLYLLVIEA-------------------------NRPKEVLARLEER-GYGTRILK 147 (170)
T ss_dssp GGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------GCHHHHHHHHHHT-TCEEEEEE
T ss_pred cchHHHHHHHHhhC-CCCEEEEEEecC-------------------------CCHHHHHHHHHHC-CCcEEEEE
Confidence 23356788888888 999999865421 2345666677774 78766543
No 250
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.56 E-value=0.00048 Score=72.75 Aligned_cols=104 Identities=13% Similarity=0.202 Sum_probs=63.2
Q ss_pred hHHHHhhhcccccc--------hHHHHhccccccchhccccCCCeehhhc------------HHHHHHh--cCCEEEEEc
Q 043102 364 TQACRHISRHYDLS--------NELFCLFLDESLTYSCALFKVREVIFLG------------TIEVVKR--TGCKYTGIT 421 (525)
Q Consensus 364 ~~s~~nIa~hYDl~--------nd~y~l~Ld~~m~ys~a~f~~~rVLDIG------------a~~lA~~--~G~~VtGId 421 (525)
...+..++..|+-. .++|+..|.+-. .+..+||||| ++.++++ .+++|+|||
T Consensus 181 ~~~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~------~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVD 254 (419)
T 3sso_A 181 KPDLSELSSRYFTPKFGFLHWFTPHYDRHFRDYR------NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLD 254 (419)
T ss_dssp CCCHHHHHHHTTCTTBSSSCBCHHHHHHHHGGGT------TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEE
T ss_pred CccHHHHHHHhCCCcccccchHHHHHHHHHHhhc------CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 44566667767521 245655554311 1235999998 3466665 379999999
Q ss_pred CChHHHHHHHHHHH--HcCCCC------------C-Cc-----ccCcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 422 LAEKQLKYAGIKVK--EADLER------------N-DR-----SFGHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 422 lS~eql~~Ar~r~~--~~gl~d------------~-D~-----~vg~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+|++|.. ...++. .....+ . |. ..-..++..+|++++++|||||++++.++.
T Consensus 255 iSp~m~~-~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 255 IMDKSHV-DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp SSCCGGG-CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCHHHhh-cCCCcEEEEecccccchhhhhhcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999831 000100 000000 0 22 111356789999999999999999998876
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.22 E-value=0.0044 Score=64.48 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=54.3
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC---CCC----C------Cc---------------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD---LER----N------DR--------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g---l~d----~------D~--------------- 444 (525)
.+||+|| +.+++++...+|+.||+|++.++.|++.+...+ +++ + |+
T Consensus 190 krVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fD 269 (364)
T 2qfm_A 190 KDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFD 269 (364)
T ss_dssp CEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEE
T ss_pred CEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCce
Confidence 4999999 667777544699999999999999999875321 222 1 22
Q ss_pred -------c--cC--c--ccHHHHHHHH----HhccCCCcEEEEEEecC
Q 043102 445 -------S--FG--H--EYMEEFFGCC----ESLIAKDGLFVLQFISI 475 (525)
Q Consensus 445 -------~--vg--~--~~~~~~f~~i----~r~LkpGG~~viq~i~~ 475 (525)
. ++ . -+...|++.+ .++|+|||++++|.-..
T Consensus 270 vII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 270 YVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp EEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred EEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 1 11 1 1335677776 99999999999997543
No 252
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.20 E-value=0.0072 Score=60.16 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=36.0
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
+..+||||| +..++++ +++|+|||+|+++++.|+++++..++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~ 75 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPV 75 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTT
T ss_pred CCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 345999999 7888876 88999999999999999999876554
No 253
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.20 E-value=0.0055 Score=63.35 Aligned_cols=42 Identities=24% Similarity=0.139 Sum_probs=36.8
Q ss_pred Ceehhhc------HHHHHHhcCC--EEEEEcCChHHHHHHHHHHHHcCCCC
Q 043102 399 REVIFLG------TIEVVKRTGC--KYTGITLAEKQLKYAGIKVKEADLER 441 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~--~VtGIdlS~eql~~Ar~r~~~~gl~d 441 (525)
.+|||+| ++++|+. +. +|+|+|+|+++++.|+++++.+|+++
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~ 268 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALAAGVLD 268 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHHTTCGG
T ss_pred CEEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHHcCCCC
Confidence 3899999 7788875 55 99999999999999999999999844
No 254
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.15 E-value=0.003 Score=63.24 Aligned_cols=74 Identities=5% Similarity=0.039 Sum_probs=56.1
Q ss_pred Ceehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccCc
Q 043102 399 REVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFGH 448 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg~ 448 (525)
.+||||| ++.++.. ..++|+++|+++.+++.+++++...|+..+ |. ++..
T Consensus 134 ~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~Le~ 213 (281)
T 3lcv_B 134 NTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLET 213 (281)
T ss_dssp SEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHHHH
T ss_pred ceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHhhh
Confidence 4999999 5555554 478999999999999999999999888644 32 1112
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEe
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i 473 (525)
+....-| ++.+.|+|+|.++-..+
T Consensus 214 q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 214 QQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred hhhHHHH-HHHHHhCCCCEEEeccc
Confidence 2233556 89999999999987655
No 255
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.13 E-value=0.033 Score=63.28 Aligned_cols=84 Identities=12% Similarity=0.119 Sum_probs=53.5
Q ss_pred HHHHHHHh--ccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHHh---hcCCCCHH
Q 043102 74 MMELFESL--GVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALKI---LGNQATFD 148 (525)
Q Consensus 74 ~~~~~~~~--gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~l---L~~~~t~~ 148 (525)
|..+.+.+ |+++.++..+.+|..+ . .||.|.+.+|.+..+|+||+|+++....+. +.......
T Consensus 533 ~~~l~~aLa~gl~I~l~t~V~~I~~~--------~----~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~ 600 (776)
T 4gut_A 533 YSVIIEKLAEGLDIQLKSPVQCIDYS--------G----DEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEK 600 (776)
T ss_dssp THHHHHHHHTTSCEESSCCEEEEECS--------S----SSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHH
T ss_pred HHHHHHHHHhCCcEEcCCeeEEEEEc--------C----CEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHH
Confidence 44555666 5666666666555331 1 268899889988899999999998766542 22223344
Q ss_pred HHhhccCCc-----eeEeccCCCCCC
Q 043102 149 ETRTGGAFH-----DIFLHCDKNSMP 169 (525)
Q Consensus 149 E~~iLg~f~-----~~vlHtD~s~mP 169 (525)
..+.+..+. .++|.-|..+++
T Consensus 601 ~~~ai~~l~~g~~~KV~l~f~~~FW~ 626 (776)
T 4gut_A 601 KMKAINSLGAGIIEKIALQFPYRFWD 626 (776)
T ss_dssp HHHHHHHEEEECCEEEEEECSSCTTH
T ss_pred HHHHHHhCCCeeEEEEEEecCccccc
Confidence 444444444 778887776654
No 256
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.06 E-value=0.011 Score=54.77 Aligned_cols=72 Identities=11% Similarity=0.044 Sum_probs=51.0
Q ss_pred CCCeehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcCCCCC-------------Cc-------cc-Cc
Q 043102 397 KVREVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEADLERN-------------DR-------SF-GH 448 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~gl~d~-------------D~-------~v-g~ 448 (525)
+..+|||+| ++.+++. | .+|+|+|+|+++++.|+++++..++... |. +. ..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSST
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCccccC
Confidence 345999999 7777875 5 4899999999999999999887665111 22 11 11
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.....+++.+.++| ||.++++
T Consensus 128 ~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 128 HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp TTTHHHHHHHHHHC--SEEEEEE
T ss_pred CchHHHHHHHHHhc--CcEEEEE
Confidence 23467889999988 5555443
No 257
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.02 E-value=0.00067 Score=62.67 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=22.9
Q ss_pred Ceehhhc------HHHHHHhc---CCEEEEEcCChH
Q 043102 399 REVIFLG------TIEVVKRT---GCKYTGITLAEK 425 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~---G~~VtGIdlS~e 425 (525)
.+||||| ++.++++. +++|+|+|+|+.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 4899999 77888775 489999999984
No 258
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.90 E-value=0.006 Score=57.07 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=46.1
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHH-----------------HHHHHHHHHcCCCCC------Cc---cc
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQL-----------------KYAGIKVKEADLERN------DR---SF 446 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql-----------------~~Ar~r~~~~gl~d~------D~---~v 446 (525)
.+|||+| +..+|++ +++|+|||+|+.+. +..++...+.+. .. |. ..
T Consensus 27 ~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~-~~~D~Vlsd~~~~~~ 104 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGI-EKVDDVVSDAMAKVS 104 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTC-SSEEEEEECCCCCCC
T ss_pred CEEEEEeecCCHHHHHHHHc-CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccC-CcceEEecCCCcCCC
Confidence 4999999 7788876 99999999998521 000000110000 01 22 11
Q ss_pred Cc---------ccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 447 GH---------EYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 447 g~---------~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
|. ......++.+.++|||||.+++....
T Consensus 105 g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 105 GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 21 12356788999999999999987653
No 259
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.88 E-value=0.0073 Score=58.07 Aligned_cols=113 Identities=14% Similarity=0.076 Sum_probs=67.9
Q ss_pred CCeehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC------C------------------c--
Q 043102 398 VREVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN------D------------------R-- 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D------------------~-- 444 (525)
..+||||| ++.++++ .+++|+|+|+|+++++.|+++++..++.++ | .
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 34999999 6677765 379999999999999999999987766432 2 1
Q ss_pred ------ccCc-------------ccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcccCchhHHhh--cc-cCCCCCCC
Q 043102 445 ------SFGH-------------EYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEFRLSSDFMKE--YI-FPGGCLPS 502 (525)
Q Consensus 445 ------~vg~-------------~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~~~~~~fi~k--YI-FPGg~LPs 502 (525)
+.+. .....++.+++++|||||.+.+.... ... ...++.. ++ +..+..++
T Consensus 146 ~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~-----~~~---~~~~l~~~g~~~~~~~~~~~ 217 (254)
T 2h00_A 146 CNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI-----IHD---SLQLKKRLRWYSCMLGKKCS 217 (254)
T ss_dssp ECCCCC-------------------------CTTTTHHHHTHHHHHHHH-----HHH---HHHHGGGBSCEEEEESSTTS
T ss_pred ECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH-----HHH---HHhcccceEEEEECCCChhH
Confidence 0010 01124678899999999988653211 110 1111111 11 11234566
Q ss_pred HHHHHHHHHhcCCcEEE
Q 043102 503 LSRITSAMSAASRLWYN 519 (525)
Q Consensus 503 l~~i~~~~~~a~gl~V~ 519 (525)
+.++.+.++++ ||+.+
T Consensus 218 ~~~~~~~l~~~-Gf~~v 233 (254)
T 2h00_A 218 LAPLKEELRIQ-GVPKV 233 (254)
T ss_dssp HHHHHHHHHHT-TCSEE
T ss_pred HHHHHHHHHHc-CCCce
Confidence 78888889885 88644
No 260
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=95.84 E-value=0.031 Score=59.58 Aligned_cols=60 Identities=10% Similarity=0.091 Sum_probs=44.4
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHh----------h--cCCCCHHHHhhccCCc-----eeEeccCCCCCCCC
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKI----------L--GNQATFDETRTGGAFH-----DIFLHCDKNSMPQN 171 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~l----------L--~~~~t~~E~~iLg~f~-----~~vlHtD~s~mP~~ 171 (525)
+|.|.+.+|+...+|+||+|++.....+. + ....+...++.+..+. .+++.-|..+.+..
T Consensus 233 ~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 233 NVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNE 309 (516)
T ss_dssp CEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCS
T ss_pred eEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCC
Confidence 68899999988899999999998866532 1 1123455566777776 88888888888754
No 261
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.82 E-value=0.058 Score=55.45 Aligned_cols=56 Identities=16% Similarity=0.089 Sum_probs=36.7
Q ss_pred cEEEEeCCCceEeCCEEEEecChHHHHHhh-cCCCCHHHHhhccCCc-----eeEeccCCCC
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAPDALKIL-GNQATFDETRTGGAFH-----DIFLHCDKNS 167 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~hadqAL~lL-~~~~t~~E~~iLg~f~-----~~vlHtD~s~ 167 (525)
+|.|.+.+|.+..+|+||+|++.....++. .........+.++... .+.++-++++
T Consensus 235 ~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 235 VVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp SEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred eEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 688988888778999999999998766653 2212333333333332 6666666654
No 262
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.82 E-value=0.0088 Score=63.28 Aligned_cols=73 Identities=12% Similarity=0.120 Sum_probs=52.8
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------Cc-ccC--cccH-HH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--------------DR-SFG--HEYM-EE 453 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------D~-~vg--~~~~-~~ 453 (525)
..+|||+| ++.+|+. +.+|+|||+|+++++.|+++++..|+... |. .+. .... +.
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~~~ 369 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGLHPR 369 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTCSCHH
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccchHHH
Confidence 35899999 7788875 88999999999999999999987665411 22 111 1112 34
Q ss_pred HHHHHHhccCCCcEEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq~ 472 (525)
+++.+. .|+|||.+++..
T Consensus 370 ~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 370 LVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp HHHHHH-HHCCSEEEEEES
T ss_pred HHHHHH-hcCCCcEEEEEC
Confidence 666665 599999998853
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.81 E-value=0.0078 Score=62.71 Aligned_cols=75 Identities=12% Similarity=0.004 Sum_probs=58.0
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHc---------------CCCCC-----Cc------
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEA---------------DLERN-----DR------ 444 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~---------------gl~d~-----D~------ 444 (525)
..+|||+| ++.+|++. +.+|+++|+|++.++.|+++++.. |+++- |+
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 34899999 78888874 469999999999999999999887 76522 33
Q ss_pred --------ccCc-ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 445 --------SFGH-EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 --------~vg~-~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.+.. .....+++.+.+.|||||++++..
T Consensus 128 ~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1111 123689999999999999887754
No 264
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.77 E-value=0.011 Score=59.17 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=36.4
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
+..+||||| +..++++ +++|+|||+|+++++.|+++++..++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~ 89 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY 89 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 345999999 7788875 89999999999999999999877665
No 265
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.54 E-value=0.003 Score=57.86 Aligned_cols=23 Identities=9% Similarity=0.249 Sum_probs=20.0
Q ss_pred HHHHHHHHhccCCCcEEEEEEec
Q 043102 452 EEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..+++++.++|||||++++....
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEEecC
Confidence 47899999999999999987553
No 266
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.54 E-value=0.011 Score=60.24 Aligned_cols=74 Identities=11% Similarity=0.149 Sum_probs=53.7
Q ss_pred Ceehhhc------HHHHHHhcC------CEEEEEcCChHHHHHHHHHHHHcCCCCC----C-----------ccc-----
Q 043102 399 REVIFLG------TIEVVKRTG------CKYTGITLAEKQLKYAGIKVKEADLERN----D-----------RSF----- 446 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G------~~VtGIdlS~eql~~Ar~r~~~~gl~d~----D-----------~~v----- 446 (525)
.+|||+| ++.++++.. .+|+|+|+|+++++.|+.++...|+... | ..+
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NPPf 211 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPV 211 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEECCC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECCCC
Confidence 3999999 555665421 7999999999999999999887665222 2 111
Q ss_pred C------------------cccH-HHHHHHHHhccCCCcEEEEEE
Q 043102 447 G------------------HEYM-EEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 447 g------------------~~~~-~~~f~~i~r~LkpGG~~viq~ 472 (525)
| ..+. ..+++.+.+.|||||++++-.
T Consensus 212 g~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 212 GYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp SEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 1 1112 368999999999999998754
No 267
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.31 E-value=0.014 Score=61.11 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=43.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc----------------ccC-----cccHHHHHHHHHhccCC--C
Q 043102 415 CKYTGITLAEKQLKYAGIKVKEADLERN------DR----------------SFG-----HEYMEEFFGCCESLIAK--D 465 (525)
Q Consensus 415 ~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~----------------~vg-----~~~~~~~f~~i~r~Lkp--G 465 (525)
.+|+|+|+|+++++.|+++++.+|+.+. |. -.| .+....+++.+.+.||+ |
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 5699999999999999999999998764 32 112 13456677777777776 8
Q ss_pred cEEEEEE
Q 043102 466 GLFVLQF 472 (525)
Q Consensus 466 G~~viq~ 472 (525)
|.+++-+
T Consensus 344 ~~~~iit 350 (393)
T 3k0b_A 344 WSVYVLT 350 (393)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 8887743
No 268
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=95.31 E-value=0.0022 Score=56.72 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=48.6
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcC-------------CCCC--Cc--------cc
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEAD-------------LERN--DR--------SF 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~g-------------l~d~--D~--------~v 446 (525)
..+|||+| +..+++.. +++|+|+|+|+ +++..+-.+.... +.+. |. +.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMS 101 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCcccc
Confidence 34999999 67777764 58999999998 6543111100001 1111 33 11
Q ss_pred Ccc---c------HHHHHHHHHhccCCCcEEEEEEecC
Q 043102 447 GHE---Y------MEEFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 447 g~~---~------~~~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
+.. . ...+++++.++|||||++++.....
T Consensus 102 ~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 102 GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 111 1 1689999999999999999876543
No 269
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.27 E-value=0.087 Score=55.44 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=27.3
Q ss_pred CCCeEEeccCCC--CCCchhhhchHHHHHhhhc
Q 043102 237 RRGIWFRGAYQG--YGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 237 ~~~~~fcGay~g--~GfHEdg~~Sgl~aA~~ll 267 (525)
.++++|||.++. +|+-|+|+.||++||++++
T Consensus 449 ~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~ 481 (498)
T 2iid_A 449 QGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVN 481 (498)
T ss_dssp BTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcccccCCcCHHHHHHHHHHHHHHHH
Confidence 468999999983 6888999999999999984
No 270
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.18 E-value=0.11 Score=57.53 Aligned_cols=32 Identities=9% Similarity=-0.101 Sum_probs=28.0
Q ss_pred CCCCeEEeccCCC---CCCchhhhchHHHHHhhhc
Q 043102 236 GRRGIWFRGAYQG---YGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 236 G~~~~~fcGay~g---~GfHEdg~~Sgl~aA~~ll 267 (525)
+.++|+|||.++. +|+-|+|+.||++||++++
T Consensus 621 ~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~ 655 (662)
T 2z3y_A 621 PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 655 (662)
T ss_dssp CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHH
Confidence 3479999999985 6899999999999999874
No 271
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.12 E-value=0.011 Score=58.52 Aligned_cols=73 Identities=12% Similarity=0.032 Sum_probs=51.1
Q ss_pred Ceehhhc----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc--------ccCcccH
Q 043102 399 REVIFLG----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR--------SFGHEYM 451 (525)
Q Consensus 399 ~rVLDIG----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~--------~vg~~~~ 451 (525)
.+||||| -+.++-..+.+|+|+|||+.+++.|++++...|...+ |. ++.....
T Consensus 107 ~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 107 RRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp SEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHHHHST
T ss_pred CeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHhhhhch
Confidence 4999999 2223222578999999999999999999887775432 22 1112223
Q ss_pred HHHHHHHHhccCCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~ 472 (525)
...+ ++.+.|+++|.++--.
T Consensus 187 ~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 187 GSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp THHH-HHHHHCBCSEEEEEEE
T ss_pred hhHH-HHHHHhcCCCEEEEcC
Confidence 3445 7788999999887654
No 272
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=95.07 E-value=0.013 Score=54.04 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=47.1
Q ss_pred CCCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcC--------CCCC-Cc--------ccCcccHH
Q 043102 397 KVREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEAD--------LERN-DR--------SFGHEYME 452 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~g--------l~d~-D~--------~vg~~~~~ 452 (525)
+..+|||+| ++.+++. |+ +|+|||+|+++++.|+++++... +... |. +.......
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~~ 129 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSDR 129 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------CH
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchhH
Confidence 345999999 6777775 65 79999999999999999864110 1111 33 11112235
Q ss_pred HHHHHHHhccCCCcEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq 471 (525)
.+++++.++| |+.++++
T Consensus 130 ~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 130 AFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp HHHHHHHHHE--EEEEEEE
T ss_pred HHHHHHHHhc--CcEEEEE
Confidence 7899999998 5544444
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=94.75 E-value=0.025 Score=57.11 Aligned_cols=75 Identities=19% Similarity=0.359 Sum_probs=55.6
Q ss_pred eehhhc------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHH--cC-CCCC-------Cc------------------
Q 043102 400 EVIFLG------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKE--AD-LERN-------DR------------------ 444 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~--~g-l~d~-------D~------------------ 444 (525)
+||=|| +.++++..+ .+|+.|+|+++.++.|++.+.+ .+ +++. |+
T Consensus 86 ~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~ 165 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDC 165 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESC
T ss_pred eEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeC
Confidence 899999 667777544 6999999999999999998754 22 2222 22
Q ss_pred --ccCcc---cHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 --SFGHE---YMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 --~vg~~---~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..|.. +-.+|++.|.+.|+|||+++.|.-+
T Consensus 166 ~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 166 TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 11211 2368999999999999999999754
No 274
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.61 E-value=0.038 Score=53.55 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=33.6
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
++.+||||| +..++++ +++|+|||+|+++++.|+++++.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~ 74 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVD 74 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTT
T ss_pred CCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhcc
Confidence 345999999 7788876 79999999999999999998753
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=94.49 E-value=0.018 Score=57.98 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=47.2
Q ss_pred CCeehhhcH----------HHHHHhc--CCEEEEEcCChHHHHHHHHHHHH---c-----CCCCC-Cc-------cc-C-
Q 043102 398 VREVIFLGT----------IEVVKRT--GCKYTGITLAEKQLKYAGIKVKE---A-----DLERN-DR-------SF-G- 447 (525)
Q Consensus 398 ~~rVLDIGa----------~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~---~-----gl~d~-D~-------~v-g- 447 (525)
..+|||||+ ..+++.. +++|+|||+|++ ++ +++- . .+... |. +. |
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v~----~v~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~ 138 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-VS----DADSTLIGDCATVHTANKWDLIISDMYDPRTKH 138 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-BC----SSSEEEESCGGGCCCSSCEEEEEECCCCCC---
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-CC----CCEEEEECccccCCccCcccEEEEcCCcccccc
Confidence 459999996 6677664 489999999998 21 1111 0 11111 33 11 1
Q ss_pred --------cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 448 --------HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 448 --------~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
...++..++++.++|||||+|++..+.
T Consensus 139 ~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 139 VTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 123568999999999999999996543
No 276
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.46 E-value=0.025 Score=56.79 Aligned_cols=76 Identities=8% Similarity=-0.075 Sum_probs=55.8
Q ss_pred Ceehhhc------HHHHHHh------cCCEEEEEcCChH--------------------------HHHHHHHHHHHcCCC
Q 043102 399 REVIFLG------TIEVVKR------TGCKYTGITLAEK--------------------------QLKYAGIKVKEADLE 440 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~------~G~~VtGIdlS~e--------------------------ql~~Ar~r~~~~gl~ 440 (525)
++||||| ++.+|+- .+.+|+++|..+. .++.|++++++.|+.
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 4899999 5555432 2689999996421 467899999999984
Q ss_pred -CC------Cc---------------ccC--c-ccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 441 -RN------DR---------------SFG--H-EYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 441 -d~------D~---------------~vg--~-~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
++ |+ ++. . +.+..+|+.+...|+|||.++++.+.
T Consensus 188 ~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp STTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 55 21 222 2 34568899999999999999998873
No 277
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.27 E-value=0.059 Score=56.17 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=51.6
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcc-hh----------c-------c----cCchhHHhhcccCCCCCCCHHHH
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDER-YN----------E-------F----RLSSDFMKEYIFPGGCLPSLSRI 506 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~-~~----------~-------~----~~~~~fi~kYIFPGg~LPsl~~i 506 (525)
+++..|++..++.|||||++++......+.. +. . + ....+++..+-.|- +.||++|+
T Consensus 202 ~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~-y~ps~~E~ 280 (374)
T 3b5i_A 202 ADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPV-YAPSLQDF 280 (374)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCB-CCCCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccc-cCCCHHHH
Confidence 3789999999999999999999988775421 10 0 0 00123333334454 78999999
Q ss_pred HHHHHhcCCcEEEEE
Q 043102 507 TSAMSAASRLWYNLA 521 (525)
Q Consensus 507 ~~~~~~a~gl~V~~~ 521 (525)
...+++.+||+|+..
T Consensus 281 ~~~l~~~~~F~I~~l 295 (374)
T 3b5i_A 281 KEVVDANGSFAIDKL 295 (374)
T ss_dssp HHHHHHHCSEEEEEE
T ss_pred HHHHHhcCCcEEEEE
Confidence 999997679999765
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.22 E-value=0.063 Score=59.66 Aligned_cols=69 Identities=14% Similarity=0.223 Sum_probs=53.9
Q ss_pred eehhhc---------HHHHHHhcCC--EEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc----ccC
Q 043102 400 EVIFLG---------TIEVVKRTGC--KYTGITLAEKQLKYAGIKVKEADLERN-----------------DR----SFG 447 (525)
Q Consensus 400 rVLDIG---------a~~lA~~~G~--~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~----~vg 447 (525)
.|||+| ++.++++.+. +|.+|+-|+ +...|++.+++.|++++ |- -+|
T Consensus 360 vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG 438 (637)
T 4gqb_A 360 VLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLG 438 (637)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred EEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCc
Confidence 799999 6777776554 789999996 78899999999888776 22 112
Q ss_pred ----cccHHHHHHHHHhccCCCcEEE
Q 043102 448 ----HEYMEEFFGCCESLIAKDGLFV 469 (525)
Q Consensus 448 ----~~~~~~~f~~i~r~LkpGG~~v 469 (525)
.+...+.+....|.|||||+++
T Consensus 439 ~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 439 SFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp TTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred ccccccCCHHHHHHHHHhcCCCcEEc
Confidence 3456788888999999999875
No 279
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=94.20 E-value=0.22 Score=57.09 Aligned_cols=32 Identities=9% Similarity=-0.101 Sum_probs=28.0
Q ss_pred CCCCeEEeccCCC---CCCchhhhchHHHHHhhhc
Q 043102 236 GRRGIWFRGAYQG---YGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 236 G~~~~~fcGay~g---~GfHEdg~~Sgl~aA~~ll 267 (525)
+.++|+|||.++. +|+-|+|+.||++||++++
T Consensus 792 ~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il 826 (852)
T 2xag_A 792 PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 826 (852)
T ss_dssp CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHH
Confidence 3479999999984 6899999999999999874
No 280
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.11 E-value=0.11 Score=52.39 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=36.8
Q ss_pred CCeehhhc------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCC
Q 043102 398 VREVIFLG------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLE 440 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~ 440 (525)
..+|||+| ++.+|+.. +.+|+++|+|+++++.++++++..|+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~ 153 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS 153 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 45999999 77788753 479999999999999999999988863
No 281
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=94.11 E-value=0.0049 Score=61.45 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=46.0
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHH-H-------------HcC---CCCC--Cc---cc---
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKV-K-------------EAD---LERN--DR---SF--- 446 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~-~-------------~~g---l~d~--D~---~v--- 446 (525)
..+||||| +..++++ ++|+|||+|+ |+..|+++. . ... +.+. |. .+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIGES 159 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCCCC
T ss_pred CCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCCcC
Confidence 34999999 7788876 7999999998 543332211 0 000 1111 33 11
Q ss_pred -Cccc---H--HHHHHHHHhccCCCc--EEEEEEec
Q 043102 447 -GHEY---M--EEFFGCCESLIAKDG--LFVLQFIS 474 (525)
Q Consensus 447 -g~~~---~--~~~f~~i~r~LkpGG--~~viq~i~ 474 (525)
+... . ...++.+.++||||| .|++....
T Consensus 160 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 160 NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 1111 1 137899999999999 99996655
No 282
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.11 E-value=0.035 Score=58.61 Aligned_cols=74 Identities=9% Similarity=0.097 Sum_probs=53.4
Q ss_pred Ceehhhc------HHHHHHh--------------cCCEEEEEcCChHHHHHHHHHHHHcCCCC---C----Cc-------
Q 043102 399 REVIFLG------TIEVVKR--------------TGCKYTGITLAEKQLKYAGIKVKEADLER---N----DR------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~--------------~G~~VtGIdlS~eql~~Ar~r~~~~gl~d---~----D~------- 444 (525)
.+|||.| .+.+++. .+.+++|+|+++.+++.|+.++...|+.. . |.
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~~ 252 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPST 252 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCSS
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcccC
Confidence 3899999 4444442 24789999999999999999988878742 1 21
Q ss_pred ----cc-----Cc------c------------cHHHHHHHHHhccCCCcEEEEEE
Q 043102 445 ----SF-----GH------E------------YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 ----~v-----g~------~------------~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.+ +. . ....|++.+.++|||||++++-.
T Consensus 253 ~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 253 LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 00 10 0 02478999999999999998754
No 283
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=94.05 E-value=0.065 Score=56.14 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=57.7
Q ss_pred Ceehhhc------HHHHHHhc-C-CEEEEEcCChHHHHHHHHHHHHcCCCC--C-----Cc----c-----------cCc
Q 043102 399 REVIFLG------TIEVVKRT-G-CKYTGITLAEKQLKYAGIKVKEADLER--N-----DR----S-----------FGH 448 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~-G-~~VtGIdlS~eql~~Ar~r~~~~gl~d--~-----D~----~-----------vg~ 448 (525)
.+|||++ ++++|++. | .+|+++|+|++.++.|+++++..|+++ - |+ . +..
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 4899998 78888763 5 589999999999999999999988865 1 43 1 011
Q ss_pred -ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 -EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 -~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.....+++.+.++|||||++++..
T Consensus 134 ~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 134 FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 112579999999999999887755
No 284
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.01 E-value=0.088 Score=54.87 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=45.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc--------------------ccC-cccHHHHHHHHHhccCC--C
Q 043102 415 CKYTGITLAEKQLKYAGIKVKEADLERN------DR--------------------SFG-HEYMEEFFGCCESLIAK--D 465 (525)
Q Consensus 415 ~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~--------------------~vg-~~~~~~~f~~i~r~Lkp--G 465 (525)
.+|+|+|+|+++++.|+++++.+|+++. |. .+| .+....+++.+.+.||+ |
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 5699999999999999999999998764 22 112 24567788888888877 8
Q ss_pred cEEEEEE
Q 043102 466 GLFVLQF 472 (525)
Q Consensus 466 G~~viq~ 472 (525)
|.+++-+
T Consensus 337 ~~~~iit 343 (384)
T 3ldg_A 337 WSQFILT 343 (384)
T ss_dssp SEEEEEE
T ss_pred cEEEEEE
Confidence 9887754
No 285
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.80 E-value=0.038 Score=54.35 Aligned_cols=39 Identities=10% Similarity=0.145 Sum_probs=34.1
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
++.+||||| +..++++ +++|+|||+|+++++.|+++++.
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT
T ss_pred CcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh
Confidence 345999999 7888875 79999999999999999999864
No 286
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=93.67 E-value=0.0054 Score=60.75 Aligned_cols=73 Identities=15% Similarity=0.043 Sum_probs=45.4
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHH----------HH----HcC---CCCC--Cc---c----c
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIK----------VK----EAD---LERN--DR---S----F 446 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r----------~~----~~g---l~d~--D~---~----v 446 (525)
.+||||| +..++++ ++|+|||+|+ |+..|+++ +. ... +.+. |. . .
T Consensus 76 ~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~~~~ 152 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVGESS 152 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCcccC
Confidence 4999999 7778875 7999999998 53322211 00 001 1111 33 1 1
Q ss_pred Cccc---H--HHHHHHHHhccCCCc--EEEEEEec
Q 043102 447 GHEY---M--EEFFGCCESLIAKDG--LFVLQFIS 474 (525)
Q Consensus 447 g~~~---~--~~~f~~i~r~LkpGG--~~viq~i~ 474 (525)
+... . ...++.+.++||||| .|++....
T Consensus 153 ~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 153 PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 1111 1 137899999999999 99997665
No 287
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=93.49 E-value=0.011 Score=59.72 Aligned_cols=75 Identities=9% Similarity=0.057 Sum_probs=45.7
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcC----ChHHHHHHH-HHH--HH----cCCCC-----C--Cc-------ccC
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITL----AEKQLKYAG-IKV--KE----ADLER-----N--DR-------SFG 447 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdl----S~eql~~Ar-~r~--~~----~gl~d-----~--D~-------~vg 447 (525)
.+||||| +..+|++ .+|+|||+ |+++++.++ ++. .. .+++. . |. ++|
T Consensus 84 ~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCccccC
Confidence 4999999 7788876 58999999 665543221 111 00 11111 1 33 123
Q ss_pred ccc--HH---HHHHHHHhccCCCcEEEEEEecC
Q 043102 448 HEY--ME---EFFGCCESLIAKDGLFVLQFISI 475 (525)
Q Consensus 448 ~~~--~~---~~f~~i~r~LkpGG~~viq~i~~ 475 (525)
... .. ..++.+.++|||||.|+++.+..
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 211 11 47889999999999999976543
No 288
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=93.47 E-value=0.059 Score=56.11 Aligned_cols=58 Identities=16% Similarity=0.250 Sum_probs=43.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc----------------ccC-----cccHHHHHHHHHhccCC--C
Q 043102 415 CKYTGITLAEKQLKYAGIKVKEADLERN------DR----------------SFG-----HEYMEEFFGCCESLIAK--D 465 (525)
Q Consensus 415 ~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~----------------~vg-----~~~~~~~f~~i~r~Lkp--G 465 (525)
.+|+|+|+|+++++.|+++++.+|+++. |. -.| .+....+++++.+.||+ |
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 5799999999999999999999988643 22 112 23566778888888877 8
Q ss_pred cEEEEEE
Q 043102 466 GLFVLQF 472 (525)
Q Consensus 466 G~~viq~ 472 (525)
|.+++-+
T Consensus 338 ~~~~iit 344 (385)
T 3ldu_A 338 WSYYLIT 344 (385)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 8887643
No 289
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=93.47 E-value=0.071 Score=56.25 Aligned_cols=41 Identities=12% Similarity=0.011 Sum_probs=36.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--CC
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--DL 439 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--gl 439 (525)
..+|||+| ++.+|+. +++|+|||+|+++++.|+++++.. |+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl 142 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG 142 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC
Confidence 45999999 7778875 899999999999999999999887 76
No 290
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=93.24 E-value=0.059 Score=54.37 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=35.9
Q ss_pred CCeehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcC
Q 043102 398 VREVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEAD 438 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~g 438 (525)
+.+|||+| ++.++++. +++|+|||+|+++++.|+++++..|
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g 74 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS 74 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 45999999 78888875 6899999999999999999987765
No 291
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.17 E-value=0.086 Score=55.16 Aligned_cols=72 Identities=15% Similarity=0.224 Sum_probs=51.3
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCc--c------hhcc--------cCchhHHhhcccCCCCCCCHHHHHHHHHh
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDE--R------YNEF--------RLSSDFMKEYIFPGGCLPSLSRITSAMSA 512 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~--~------~~~~--------~~~~~fi~kYIFPGg~LPsl~~i~~~~~~ 512 (525)
+++..|++..++.|||||++++...+.+.. . .... .-..+-+..+-.|- +.||.+|+...+++
T Consensus 202 ~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~-y~ps~~E~~~~le~ 280 (384)
T 2efj_A 202 KDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPI-YAPSTEEVKRIVEE 280 (384)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSB-CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcc-cCCCHHHHHHHHHH
Confidence 368899999999999999999998877653 1 1000 00111223344455 88999999999999
Q ss_pred cCCcEEEEE
Q 043102 513 ASRLWYNLA 521 (525)
Q Consensus 513 a~gl~V~~~ 521 (525)
.++|+|+..
T Consensus 281 ~g~F~i~~l 289 (384)
T 2efj_A 281 EGSFEILYL 289 (384)
T ss_dssp HCSEEEEEE
T ss_pred cCCceEEEE
Confidence 878888765
No 292
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=93.13 E-value=0.033 Score=54.87 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=34.7
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCCh-------HHHHHHHHHHHHcCC
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAE-------KQLKYAGIKVKEADL 439 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~-------eql~~Ar~r~~~~gl 439 (525)
.+|||+| ++.+|+. |++|+|+|+|+ ++++.|+++++..++
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~ 137 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT 137 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC
Confidence 4899999 8888885 89999999999 999999988766554
No 293
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=92.91 E-value=0.084 Score=53.15 Aligned_cols=39 Identities=26% Similarity=0.164 Sum_probs=34.2
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
++.+||||| +..++++ +.+|+|||+|+++++.|+++++.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~ 94 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL 94 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc
Confidence 445999999 7788876 89999999999999999999863
No 294
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=92.73 E-value=0.089 Score=55.39 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=37.4
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE 440 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~ 440 (525)
..+|||+| ++.+|++ +++|+|+|+|+++++.|+++++..|+.
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~ 334 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ 334 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 35999999 8888886 899999999999999999999887764
No 295
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=92.19 E-value=0.14 Score=53.15 Aligned_cols=72 Identities=15% Similarity=0.296 Sum_probs=50.2
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEEecCCCcc---------hhccc-CchhH----------HhhcccCCCCCCCHHHHHH
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQFISIPDER---------YNEFR-LSSDF----------MKEYIFPGGCLPSLSRITS 508 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~---------~~~~~-~~~~f----------i~kYIFPGg~LPsl~~i~~ 508 (525)
+++..|++..++.|+|||++++...+.++.. ++... ...+. +..+..|- +.||.+|+..
T Consensus 186 ~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~-y~ps~~E~~~ 264 (359)
T 1m6e_X 186 EDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQ-YTPSPTEVEA 264 (359)
T ss_dssp HHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCC-BCCCSHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCc-cCCCHHHHHH
Confidence 4688899999999999999999988876531 11000 00111 11234454 8899999999
Q ss_pred HHHhcCCcEEEEE
Q 043102 509 AMSAASRLWYNLA 521 (525)
Q Consensus 509 ~~~~a~gl~V~~~ 521 (525)
.+++.++|+|+..
T Consensus 265 ~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 265 EILKEGSFLIDHI 277 (359)
T ss_dssp HHHHTTTBCCEEE
T ss_pred HHHHcCCceEEEE
Confidence 9999877787654
No 296
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=91.98 E-value=0.072 Score=52.93 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=33.4
Q ss_pred cCCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHH
Q 043102 396 FKVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVK 435 (525)
Q Consensus 396 f~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~ 435 (525)
-++ +||||| +..++++ +++|++||+|+++++.+++++.
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTT
T ss_pred CCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcC
Confidence 345 899999 7788875 8999999999999999999875
No 297
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=91.39 E-value=0.099 Score=52.10 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=31.4
Q ss_pred CCCeehhhc------HHHHHHhcCCE----EEEEcCChHHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCK----YTGITLAEKQLKYAGIKV 434 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~----VtGIdlS~eql~~Ar~r~ 434 (525)
++.+||||| +..++++ +.+ |+|||+|+++++.|+++.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc
Confidence 345999999 7788875 555 999999999999999983
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=91.38 E-value=0.22 Score=52.07 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=54.1
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--C-CCCC----------Cc---------------
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--D-LERN----------DR--------------- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--g-l~d~----------D~--------------- 444 (525)
.+||=|| +.++.+....+|+.|+|+++.++.|++.+... + +++. |+
T Consensus 207 krVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yD 286 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFD 286 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEE
T ss_pred CeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCcee
Confidence 4999999 66777655579999999999999999875321 1 1111 21
Q ss_pred ---------c-----cC---cccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 445 ---------S-----FG---HEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 445 ---------~-----vg---~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
. .+ .-+.++|++.+.+.|+|||+++.|.-+
T Consensus 287 vIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 287 YVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp EEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 0 01 123468899999999999999999654
No 299
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=91.05 E-value=0.19 Score=51.62 Aligned_cols=41 Identities=7% Similarity=0.151 Sum_probs=36.0
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE 440 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~ 440 (525)
.+|||+| ++.+|+. ..+|+|||+|+++++.|+++++..|+.
T Consensus 215 ~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~ 261 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID 261 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred CEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 4899999 7777874 679999999999999999999988874
No 300
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=90.75 E-value=0.079 Score=54.61 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=27.5
Q ss_pred CCeehhhc------HHHHHHh--cCCEEEEEcCChHHHHHH
Q 043102 398 VREVIFLG------TIEVVKR--TGCKYTGITLAEKQLKYA 430 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~--~G~~VtGIdlS~eql~~A 430 (525)
..+|||+| ++.++++ .+++|+|+|+|+++++.|
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 34999999 6677765 368999999999999887
No 301
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.57 E-value=0.1 Score=47.09 Aligned_cols=52 Identities=13% Similarity=0.027 Sum_probs=38.4
Q ss_pred eeeEEEecCCCCCHHHHHHHHHhhhhcCCCCeEEeccCCCCCCchhhhchHHHHHhhh
Q 043102 209 TLLKWSTGPPVPFVAASKASLELGHIQGRRGIWFRGAYQGYGFHEDGLKDLSINSCMT 266 (525)
Q Consensus 209 il~~~~y~HPv~~~~a~~aq~~l~~iqG~~~~~fcGay~g~GfHEdg~~Sgl~aA~~l 266 (525)
...+|.|..|...... -.....++++++||+|+.-+--++|+.||..+|+.|
T Consensus 272 ~~~~w~~a~~~~~~~~------~~~~~~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I 323 (336)
T 3kkj_A 272 LAHRWLYARPAGAHEW------GALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRL 323 (336)
T ss_dssp EEEEEEEEEESSCCCC------SSEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHH
T ss_pred eccceeecccccccCc------cceeeCCCCEEEEecccCCcCHHHHHHHHHHHHHHH
Confidence 4558888877644321 011224679999999987777899999999999988
No 302
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=90.28 E-value=0.13 Score=50.19 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=31.1
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIK 433 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r 433 (525)
++.+||||| +..++++..++|+|||+|+++++.++++
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc
Confidence 345999999 6777775238999999999999999987
No 303
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=88.71 E-value=0.65 Score=48.61 Aligned_cols=73 Identities=14% Similarity=0.212 Sum_probs=37.0
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHH-hhcCCC-CHHHHh
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALK-ILGNQA-TFDETR 151 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~-lL~~~~-t~~E~~ 151 (525)
|.+..++.|+++.++..+.+|..++++ -+-|++++|++..+|.||.++++.++++ ||+..+ .....+
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~~-----------~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~ 295 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGNK-----------IEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSN 295 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTE-----------EEEEEETTSCEEECSCEEECCC--------------------
T ss_pred HHHHHHHhCCceeeecceeEEEeeCCe-----------EEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhh
Confidence 455666778999999888888664321 1236678898899999999999998876 554322 223334
Q ss_pred hccCCc
Q 043102 152 TGGAFH 157 (525)
Q Consensus 152 iLg~f~ 157 (525)
-+..++
T Consensus 296 ~~~~~~ 301 (501)
T 4dgk_A 296 KLQTKR 301 (501)
T ss_dssp ------
T ss_pred hhhccc
Confidence 444444
No 304
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=88.35 E-value=0.31 Score=48.01 Aligned_cols=38 Identities=8% Similarity=0.076 Sum_probs=32.3
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA 437 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~ 437 (525)
.+|||+| ++.+|++ |++|++||+|++..+.+++.++.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a 133 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARG 133 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHH
Confidence 4899998 8888986 899999999999988888776543
No 305
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=88.29 E-value=0.034 Score=53.58 Aligned_cols=37 Identities=24% Similarity=0.282 Sum_probs=32.5
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVK 435 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~ 435 (525)
..+||||| +..++++ +++|+|||+|++|++.|+++++
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT
T ss_pred CCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc
Confidence 34999999 7788876 7999999999999999998864
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.98 E-value=0.52 Score=46.81 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=33.2
Q ss_pred CCCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc
Q 043102 397 KVREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA 437 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~ 437 (525)
+++.|||++ ++.++ +.|.+++|||+++++++.|++|+++.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~-~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAA-RWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 345999999 44444 46999999999999999999999764
No 307
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=87.34 E-value=0.26 Score=45.78 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=28.3
Q ss_pred CCCeEEeccCCC--CCCchhhhchHHHHHhhhc
Q 043102 237 RRGIWFRGAYQG--YGFHEDGLKDLSINSCMTY 267 (525)
Q Consensus 237 ~~~~~fcGay~g--~GfHEdg~~Sgl~aA~~ll 267 (525)
.++|+|||.++. .|+-|+|+.||.+||++++
T Consensus 117 ~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~ 149 (181)
T 2e1m_C 117 EGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVN 149 (181)
T ss_dssp BTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHH
Confidence 468999999987 8899999999999999885
No 308
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=86.60 E-value=0.36 Score=47.46 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=18.0
Q ss_pred HHHHHHHHHhccCCCcEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~vi 470 (525)
.+++|+.+.++|||||+++.
T Consensus 192 ~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 192 TQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp CHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCCcEEEE
Confidence 57899999999999999874
No 309
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=86.45 E-value=0.8 Score=47.32 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=33.7
Q ss_pred eehhhc------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 400 EVIFLG------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 400 rVLDIG------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
+|||+. +..+|+.. +..|+++|+|+.-++..+++++..|.
T Consensus 151 ~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~ 197 (359)
T 4fzv_A 151 IVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP 197 (359)
T ss_dssp EEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSC
T ss_pred EEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhh
Confidence 999998 77777752 34899999999999999999987665
No 310
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=85.21 E-value=0.39 Score=43.89 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=26.3
Q ss_pred Ceehhhc-------HHHHHHhcCCEEEEEcCChHHHH
Q 043102 399 REVIFLG-------TIEVVKRTGCKYTGITLAEKQLK 428 (525)
Q Consensus 399 ~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~ 428 (525)
.+||||| |..||++.|+.|+++|+|+.-++
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred CcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 4999999 88999867999999999987655
No 311
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=84.83 E-value=1.1 Score=50.33 Aligned_cols=27 Identities=11% Similarity=0.206 Sum_probs=25.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHHcCCCC
Q 043102 415 CKYTGITLAEKQLKYAGIKVKEADLER 441 (525)
Q Consensus 415 ~~VtGIdlS~eql~~Ar~r~~~~gl~d 441 (525)
.+|+|+|+|+++++.|+++++.+|+++
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~ 283 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGE 283 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGG
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999875
No 312
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=83.72 E-value=1.1 Score=48.73 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=43.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHHcCCCC------C----Cc-------------cc-----C-c--------------ccH
Q 043102 415 CKYTGITLAEKQLKYAGIKVKEADLER------N----DR-------------SF-----G-H--------------EYM 451 (525)
Q Consensus 415 ~~VtGIdlS~eql~~Ar~r~~~~gl~d------~----D~-------------~v-----g-~--------------~~~ 451 (525)
..++|+|+++.+++.|+.++...|+.. . |. .+ + . ...
T Consensus 212 ~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~ 291 (541)
T 2ar0_A 212 RAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQ 291 (541)
T ss_dssp TSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchH
Confidence 589999999999999999988777763 1 21 11 1 0 112
Q ss_pred HHHHHHHHhccCCCcEEEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~ 472 (525)
..|++.+.+.|||||++++-.
T Consensus 292 ~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 292 LCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999998753
No 313
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.41 E-value=1.5 Score=45.27 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=30.6
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHH
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIK 433 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r 433 (525)
.++||=+| ++.+|+..|+ +|++++.|++.+++|++.
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 45777777 8888988899 999999999999988764
No 314
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=83.01 E-value=0.51 Score=46.09 Aligned_cols=36 Identities=19% Similarity=0.024 Sum_probs=29.6
Q ss_pred CCCeehhhc------HHHHHHhcCCE--EEEEcCChHHHHHHHHHHH
Q 043102 397 KVREVIFLG------TIEVVKRTGCK--YTGITLAEKQLKYAGIKVK 435 (525)
Q Consensus 397 ~~~rVLDIG------a~~lA~~~G~~--VtGIdlS~eql~~Ar~r~~ 435 (525)
++.+||||| +. ++ + +.+ |+|||+|+++++.|+++++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTT
T ss_pred CcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhc
Confidence 345899999 56 54 3 567 9999999999999999874
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=81.66 E-value=0.56 Score=46.99 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------Cc---ccCcccHH
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DR---SFGHEYME 452 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~---~vg~~~~~ 452 (525)
.++||-+| ++.+|+..|++|+++|.|++.++.+++.-...-+... |. .+| -.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g---~~ 243 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV---SP 243 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC---CH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC---CH
Confidence 45788777 7888988899999999999999988653211001000 11 122 24
Q ss_pred HHHHHHHhccCCCcEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq 471 (525)
..++.+.++|+|||++++-
T Consensus 244 ~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 244 KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHHhccCCEEEEe
Confidence 6788999999999999864
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=81.62 E-value=0.59 Score=47.53 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=50.5
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC--CC--------------Cc---ccCccc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE--RN--------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~--d~--------------D~---~vg~~~ 450 (525)
.++||-+| ++.+|+..|+ +|+++|.|++.++.|++.-...-+. +. |. .+|
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g--- 267 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG--- 267 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSC---
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCC---
Confidence 35888888 7788887899 7999999999999987542110010 00 11 223
Q ss_pred HHHHHHHHHhccCCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~ 472 (525)
-+..++.+.++|++||++++-.
T Consensus 268 ~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 268 SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp CHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHhcCCEEEEeC
Confidence 2467889999999999998643
No 317
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=81.09 E-value=1.7 Score=48.79 Aligned_cols=70 Identities=11% Similarity=0.134 Sum_probs=47.8
Q ss_pred eehhhc---------HHHHHHhcC-----------CEEEEEcCChHHHHHHHHHHHHcCCCCC------Cc---------
Q 043102 400 EVIFLG---------TIEVVKRTG-----------CKYTGITLAEKQLKYAGIKVKEADLERN------DR--------- 444 (525)
Q Consensus 400 rVLDIG---------a~~lA~~~G-----------~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D~--------- 444 (525)
.|||+| ++.+++..| ++|++|+-|+.-+...+.+.+ .|++++ |.
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~~ 490 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAKD 490 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccccc
Confidence 699999 345554333 499999999866655555554 577665 11
Q ss_pred ------------ccC----cccHHHHHHHHHhccCCCcEEEE
Q 043102 445 ------------SFG----HEYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 445 ------------~vg----~~~~~~~f~~i~r~LkpGG~~vi 470 (525)
-+| .+-.++.+..+.+.|||||+++=
T Consensus 491 ~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 491 RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 112 24567888888999999998763
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.65 E-value=1.5 Score=42.49 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=32.1
Q ss_pred CCeehhhc-----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 398 VREVIFLG-----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 398 ~~rVLDIG-----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
++.|||.. +..+|.+.|.+++|+|++++.++.|++|++..++
T Consensus 213 ~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp TCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 34788876 3444555799999999999999999999987765
No 319
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=80.08 E-value=1.4 Score=40.13 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=46.2
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC------CC---------------Cc---c
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE------RN---------------DR---S 445 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~------d~---------------D~---~ 445 (525)
..+||.+| +..+++..|++|++++.+++..+.+++ .|.. +. |. .
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 114 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELTDGYGVDVVLNS 114 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence 34788888 455666669999999999998877654 2321 10 11 2
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEE
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
+| ...++.+.++|+|||++++-
T Consensus 115 ~g----~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 115 LA----GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CC----THHHHHHHHTEEEEEEEEEC
T ss_pred Cc----hHHHHHHHHHhccCCEEEEE
Confidence 23 25788899999999998864
No 320
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=79.98 E-value=1.5 Score=47.72 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=23.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHHcCCC
Q 043102 414 GCKYTGITLAEKQLKYAGIKVKEADLE 440 (525)
Q Consensus 414 G~~VtGIdlS~eql~~Ar~r~~~~gl~ 440 (525)
...++|+|+++..++.|+.++...|+.
T Consensus 283 ~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 283 QISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp GEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred hceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999998777654
No 321
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=78.47 E-value=1.4 Score=44.40 Aligned_cols=73 Identities=10% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------------CcccCcccHHHH
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------------DRSFGHEYMEEF 454 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------------D~~vg~~~~~~~ 454 (525)
.++||=+| ++.+|+..|++|++++.+++.++.+++.-...-+... |..+..-.-+..
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~ 230 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMY 230 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHH
Confidence 34777774 7788888899999999999999988863111000000 221111123567
Q ss_pred HHHHHhccCCCcEEEE
Q 043102 455 FGCCESLIAKDGLFVL 470 (525)
Q Consensus 455 f~~i~r~LkpGG~~vi 470 (525)
++.+.++|+++|+++.
T Consensus 231 ~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 231 YDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhccCCEEEE
Confidence 8899999999999974
No 322
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=77.76 E-value=0.76 Score=45.57 Aligned_cols=62 Identities=10% Similarity=0.163 Sum_probs=44.6
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc-----C---C---CCC--Cc---ccCcccHHHHHHHHHhccCCCcEEE
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA-----D---L---ERN--DR---SFGHEYMEEFFGCCESLIAKDGLFV 469 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~-----g---l---~d~--D~---~vg~~~~~~~f~~i~r~LkpGG~~v 469 (525)
++.+|+..|++|++++.|++.++++++.-... . + ... |. .+|. ..++.+.++|+|+|+++
T Consensus 163 aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~iv 238 (324)
T 3nx4_A 163 AVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGD----KVLAKVLAQMNYGGCVA 238 (324)
T ss_dssp HHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCH----HHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCc----HHHHHHHHHHhcCCEEE
Confidence 78899888999999999999999997641100 0 0 000 22 3443 37889999999999998
Q ss_pred EE
Q 043102 470 LQ 471 (525)
Q Consensus 470 iq 471 (525)
+-
T Consensus 239 ~~ 240 (324)
T 3nx4_A 239 AC 240 (324)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 323
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=76.13 E-value=1.6 Score=44.02 Aligned_cols=71 Identities=20% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCeehhhc-------HHHHHHhcCCE-EEEEcCChHHHHHHHHHHHHcC----CCCC------------------Cc---
Q 043102 398 VREVIFLG-------TIEVVKRTGCK-YTGITLAEKQLKYAGIKVKEAD----LERN------------------DR--- 444 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~-VtGIdlS~eql~~Ar~r~~~~g----l~d~------------------D~--- 444 (525)
.++||=+| ++.+|+..|++ |+++|.|++.++.|++. ...- +... |.
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 34777777 88899888997 99999999999999876 2111 1100 22
Q ss_pred ccCcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 445 SFGHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.+|. +..++.+.++|++||++++-.
T Consensus 259 ~~g~---~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 259 CTGV---ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CSCC---HHHHHHHHHHSCTTCEEEECC
T ss_pred CCCC---hHHHHHHHHHhcCCCEEEEEc
Confidence 3342 357888899999999998643
No 324
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=76.13 E-value=1.2 Score=44.26 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=48.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC--CCC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL--ERN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl--~d~---------------D~---~vg~~ 449 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.-...-+ .+. |. .+|.
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 219 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ- 219 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh-
Confidence 34777776 6778887899999999999999988753211001 011 22 3343
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
..++.+.++|++||++++-.
T Consensus 220 ---~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 220 ---DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp ---GGHHHHHTTEEEEEEEEECC
T ss_pred ---HHHHHHHHHhcCCCEEEEEe
Confidence 45778889999999998754
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=75.47 E-value=0.92 Score=45.62 Aligned_cols=73 Identities=14% Similarity=-0.004 Sum_probs=50.5
Q ss_pred CCCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC------C-Cc---ccCcccHHHHHHHHH
Q 043102 397 KVREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER------N-DR---SFGHEYMEEFFGCCE 459 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d------~-D~---~vg~~~~~~~f~~i~ 459 (525)
+.++||-+| ++.+|+..|++|++++.|++.++.|++.-...-+.+ . |. .+|.. ..++.+.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~---~~~~~~~ 252 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTH---YDLKDYL 252 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSC---CCHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcH---HHHHHHH
Confidence 345788777 788898889999999999999998876321100101 1 33 34433 2567788
Q ss_pred hccCCCcEEEEEE
Q 043102 460 SLIAKDGLFVLQF 472 (525)
Q Consensus 460 r~LkpGG~~viq~ 472 (525)
++|+|||++++-.
T Consensus 253 ~~l~~~G~iv~~G 265 (348)
T 3two_A 253 KLLTYNGDLALVG 265 (348)
T ss_dssp TTEEEEEEEEECC
T ss_pred HHHhcCCEEEEEC
Confidence 9999999998743
No 326
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=75.31 E-value=2 Score=43.38 Aligned_cols=71 Identities=21% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--C--C-C--------------Cc---ccC
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--E--R-N--------------DR---SFG 447 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~--d-~--------------D~---~vg 447 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ . + . |. .+|
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 251 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG 251 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCC
Confidence 45888888 7888888899 999999999999888753111000 0 0 0 22 333
Q ss_pred cccHHHHHHHHHhccCCCcEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
. +..++...++|+|||++++-
T Consensus 252 ~---~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 252 A---EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp C---HHHHHHHHHHSCTTCEEEEC
T ss_pred C---hHHHHHHHHHhcCCCEEEEE
Confidence 2 35678889999999999864
No 327
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.98 E-value=1.2 Score=44.42 Aligned_cols=71 Identities=20% Similarity=0.262 Sum_probs=48.6
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC--CC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE--RN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~--d~---------------D~---~vg~~ 449 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.-...-+. +. |. .+|.
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 227 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK- 227 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh-
Confidence 34777777 67788878999999999999998887631110000 00 11 3342
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
..++.+.++|++||++++-.
T Consensus 228 ---~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 228 ---DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp ---GGHHHHHHHEEEEEEEEECC
T ss_pred ---HHHHHHHHHhccCCEEEEEc
Confidence 46788889999999998743
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=74.75 E-value=0.93 Score=46.02 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=49.9
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC-C--C--------------Cc---ccCccc
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE-R--N--------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~-d--~--------------D~---~vg~~~ 450 (525)
.++||=+| ++.+|+..|++|++++.|++.++.|++.-...-++ + . |. .+|.
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~-- 267 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG-- 267 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTS--
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCh--
Confidence 34788777 78888888999999999999999887642111011 0 0 22 3442
Q ss_pred HHHHHHHHHhccCCCcEEEEEEe
Q 043102 451 MEEFFGCCESLIAKDGLFVLQFI 473 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~i 473 (525)
..++.+.++|+|||++++-..
T Consensus 268 --~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 --AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp --SCHHHHHHHEEEEEEEEEECC
T ss_pred --HHHHHHHHHhhcCCEEEEEec
Confidence 346778899999999987543
No 329
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=74.72 E-value=1.7 Score=43.79 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=48.7
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC--CC--------------Cc---ccCccc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE--RN--------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~--d~--------------D~---~vg~~~ 450 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.-...-+. +. |. .+|.+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~- 246 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA- 246 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG-
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH-
Confidence 34788874 77888878999999999999999887632110010 00 22 33432
Q ss_pred HHHHHHHHHhccCCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.++.+.+.|++||++++-.
T Consensus 247 ---~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 247 ---YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp ---GHHHHHHTEEEEEEEEECC
T ss_pred ---HHHHHHHHhccCCEEEEEE
Confidence 5777889999999987643
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=74.71 E-value=1.2 Score=44.89 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=50.6
Q ss_pred CCCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCCC-----------------Cc---ccCc
Q 043102 397 KVREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLERN-----------------DR---SFGH 448 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------D~---~vg~ 448 (525)
+.++||=+| ++.+|+..|+ +|+++|.+++.++.|++.-...-+..+ |. .+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 345788777 7888988899 899999999998888764211101000 22 2332
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
+..++.+.++|+|||++++-.
T Consensus 246 ---~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 ---VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp ---TTHHHHHHHHEEEEEEEEECC
T ss_pred ---hHHHHHHHHHHhcCCEEEEec
Confidence 256888889999999998643
No 331
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=74.67 E-value=1.9 Score=43.22 Aligned_cols=63 Identities=10% Similarity=0.004 Sum_probs=42.7
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC--CC---------------Cc---ccCcccHHHHHHHHHhccCCC
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE--RN---------------DR---SFGHEYMEEFFGCCESLIAKD 465 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~--d~---------------D~---~vg~~~~~~~f~~i~r~LkpG 465 (525)
++.+|+..|++|++++.|++.++.+++.-...-+. +. |. .+|. ..++.+.++|++|
T Consensus 181 a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~----~~~~~~~~~l~~~ 256 (349)
T 3pi7_A 181 IIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG----PLASAIFNAMPKR 256 (349)
T ss_dssp HHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH----HHHHHHHHHSCTT
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC----hhHHHHHhhhcCC
Confidence 77888888999999999999998887531110000 00 22 3342 2347788999999
Q ss_pred cEEEEEE
Q 043102 466 GLFVLQF 472 (525)
Q Consensus 466 G~~viq~ 472 (525)
|++++-.
T Consensus 257 G~iv~~G 263 (349)
T 3pi7_A 257 ARWIIYG 263 (349)
T ss_dssp CEEEECC
T ss_pred CEEEEEe
Confidence 9998743
No 332
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=74.30 E-value=2.9 Score=42.45 Aligned_cols=65 Identities=12% Similarity=0.218 Sum_probs=47.2
Q ss_pred eehhhc--------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCC----C---------------Cc---ccCc
Q 043102 400 EVIFLG--------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLER----N---------------DR---SFGH 448 (525)
Q Consensus 400 rVLDIG--------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d----~---------------D~---~vg~ 448 (525)
+||=+| ++.+|+. .|++|++++.+++.++.+++. |.+. . |. .+|
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----Gad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g- 248 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----GAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH- 248 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----TCSEEECTTSCHHHHHHTTCSCCEEEEEECSC-
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----CCCEEEeCCCCHHHHHHHhcCCCceEEEECCC-
Confidence 677655 7888886 589999999999999888653 3210 0 22 223
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
-+..++.+.++|++||++++-
T Consensus 249 --~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 --TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp --HHHHHHHHHHHSCTTCEEEEC
T ss_pred --chhhHHHHHHHhcCCCEEEEE
Confidence 346788999999999999863
No 333
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=73.92 E-value=1.5 Score=43.99 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=50.3
Q ss_pred CCCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC--CC---------------Cc---ccCc
Q 043102 397 KVREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE--RN---------------DR---SFGH 448 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~--d~---------------D~---~vg~ 448 (525)
+.++||-+| ++.+|+..|+ +|++++.|++.++.+++.-...-+. +. |. .+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g- 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSG- 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCC-
Confidence 456888887 7788887899 9999999999988887531110011 00 11 223
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
-...++.+.++|+++|++++-.
T Consensus 246 --~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 246 --APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp --CHHHHHHHHHHEEEEEEEEECC
T ss_pred --CHHHHHHHHHHHhcCCEEEEEc
Confidence 2467888899999999987643
No 334
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=73.79 E-value=1.2 Score=44.71 Aligned_cols=36 Identities=6% Similarity=-0.064 Sum_probs=29.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHH
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIK 433 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r 433 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 34788776 6778877899999999999999988764
No 335
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=72.46 E-value=3.2 Score=47.49 Aligned_cols=35 Identities=9% Similarity=-0.070 Sum_probs=27.3
Q ss_pred Ceehhhc------HHHHHHhcC----CEEEEEcCChHHHHHHHHH
Q 043102 399 REVIFLG------TIEVVKRTG----CKYTGITLAEKQLKYAGIK 433 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G----~~VtGIdlS~eql~~Ar~r 433 (525)
.+|||.| ++.++++.+ .+++|+|++++.++.|+.+
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~R 367 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIR 367 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHH
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHH
Confidence 4899998 556666543 5899999999999999443
No 336
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=72.19 E-value=0.92 Score=45.31 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=43.2
Q ss_pred Ceehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHHH-------H------HHcCCCCC--Cc-------ccCcc
Q 043102 399 REVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGIK-------V------KEADLERN--DR-------SFGHE 449 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r-------~------~~~gl~d~--D~-------~vg~~ 449 (525)
.+||||| +..++++.++ .|+|+|++......+... + +...+.+. |. +.|..
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~ 155 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSSS 155 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSCH
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCcCch
Confidence 3999999 7777776565 789999984321001110 0 00011111 22 33433
Q ss_pred cHHH-----HHHHHHhccCCC-cEEEEEEe
Q 043102 450 YMEE-----FFGCCESLIAKD-GLFVLQFI 473 (525)
Q Consensus 450 ~~~~-----~f~~i~r~LkpG-G~~viq~i 473 (525)
..+. .++.+.++|||| |.|++...
T Consensus 156 ~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 156 VTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 3322 368889999999 99999544
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=71.98 E-value=2.5 Score=42.01 Aligned_cols=67 Identities=19% Similarity=0.333 Sum_probs=47.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC------C--------------Cc---cc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER------N--------------DR---SF 446 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d------~--------------D~---~v 446 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+.+.+ |... . |. .+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDGAIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSEEEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCEEEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 34777777 67778778999999999999988873332 3211 0 22 33
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
|. ..++.+.+.|++||++++-
T Consensus 227 g~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 227 GG----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp CH----HHHHHHHTTEEEEEEEEEC
T ss_pred Cc----chHHHHHHHHhhCCEEEEE
Confidence 42 4788899999999999864
No 338
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=71.87 E-value=0.87 Score=45.71 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=50.3
Q ss_pred CCCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC--CC--------------Cc---ccCcc
Q 043102 397 KVREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE--RN--------------DR---SFGHE 449 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~--d~--------------D~---~vg~~ 449 (525)
+.++||-+| ++.+|+..|+ +|++++.|++.++.+++. ...-+. +. |. .+|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN- 241 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCC-
Confidence 456888887 7788888899 999999999998888764 211111 10 22 2332
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
...++.+.++|+++|++++-
T Consensus 242 --~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 242 --EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp --HHHHHHHHHHEEEEEEEEEC
T ss_pred --HHHHHHHHHHHhcCCEEEEE
Confidence 35688899999999998764
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=71.05 E-value=1.4 Score=45.04 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=48.5
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC-----------C-Cc---ccCcccHHHHH
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER-----------N-DR---SFGHEYMEEFF 455 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d-----------~-D~---~vg~~~~~~~f 455 (525)
.++||-+| ++.+|+..|++|++++.|++.++.|++.-...-+.. . |. .+|.. ..+
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~---~~~ 271 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAP---HNL 271 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSC---CCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCH---HHH
Confidence 45788877 788888889999999999999998875311000000 0 22 33432 246
Q ss_pred HHHHhccCCCcEEEEE
Q 043102 456 GCCESLIAKDGLFVLQ 471 (525)
Q Consensus 456 ~~i~r~LkpGG~~viq 471 (525)
+.+.++|+++|++++-
T Consensus 272 ~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 272 DDFTTLLKRDGTMTLV 287 (369)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHHHhccCCEEEEe
Confidence 7788999999998763
No 340
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=70.76 E-value=2.1 Score=42.85 Aligned_cols=72 Identities=14% Similarity=0.254 Sum_probs=49.7
Q ss_pred CCeehhhc-------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCCC--CC--------------Cc---ccCccc
Q 043102 398 VREVIFLG-------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADLE--RN--------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl~--d~--------------D~---~vg~~~ 450 (525)
.++||=+| ++.+|+.. +++|+++|.|++.++.|++.-...-+. +. |. .+|.
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~-- 249 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA-- 249 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC--
Confidence 34777777 78888876 789999999999999887641110000 00 22 3342
Q ss_pred HHHHHHHHHhccCCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~ 472 (525)
+..++.+.++|++||++++-.
T Consensus 250 -~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 250 -QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp -HHHHHHHHHHEEEEEEEEECS
T ss_pred -HHHHHHHHHHHhcCCEEEEEC
Confidence 357889999999999998643
No 341
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=70.63 E-value=2.7 Score=42.58 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=49.5
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--CC--C--------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--ER--N--------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~d--~--------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ .+ . |. .+|.
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 272 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN 272 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCC
Confidence 35888887 7888888899 899999999999988753110000 00 0 22 2332
Q ss_pred ccHHHHHHHHHhccCCC-cEEEEE
Q 043102 449 EYMEEFFGCCESLIAKD-GLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpG-G~~viq 471 (525)
...++.+.++|++| |++++-
T Consensus 273 ---~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 273 ---VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp ---HHHHHHHHHTBCTTTCEEEEC
T ss_pred ---HHHHHHHHHHhhcCCcEEEEE
Confidence 45788899999999 998864
No 342
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=69.63 E-value=2.9 Score=42.34 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=50.0
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--CC--C--------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--ER--N--------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~d--~--------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ .+ . |. .+|.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~ 275 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 275 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCC
Confidence 35888888 7888988899 899999999999988753111000 00 0 22 2332
Q ss_pred ccHHHHHHHHHhccCCC-cEEEEEE
Q 043102 449 EYMEEFFGCCESLIAKD-GLFVLQF 472 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpG-G~~viq~ 472 (525)
...++.+.++|++| |++++-.
T Consensus 276 ---~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 276 ---AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp ---HHHHHHHHHTBCTTTCEEEECC
T ss_pred ---HHHHHHHHHHhhcCCCEEEEEC
Confidence 46788899999999 9998643
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.91 E-value=2.4 Score=42.41 Aligned_cols=67 Identities=16% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC------C-------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER------N-------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d------~-------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++. |.+. . |. .+|.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCSEEECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----CCCEEecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 34788777 7788887899999999999999888642 3210 1 11 2232
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
...++.+.++|++||++++-
T Consensus 241 ---~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 241 ---KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEC
T ss_pred ---HHHHHHHHHHhhcCCEEEEe
Confidence 35688889999999998763
No 344
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=68.55 E-value=2.9 Score=42.29 Aligned_cols=67 Identities=16% Similarity=0.330 Sum_probs=48.7
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC------C--------------Cc---cc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER------N--------------DR---SF 446 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d------~--------------D~---~v 446 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++. |.+. . |. .+
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----GCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----CCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 34777777 7788887899999999999998888752 3210 0 22 33
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
|. ..++.+.++|+++|++++-.
T Consensus 240 g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 240 GG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CT----HHHHHHHHHEEEEEEEEECC
T ss_pred CH----HHHHHHHHHHhcCCEEEEEe
Confidence 42 57888999999999987643
No 345
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=68.26 E-value=2.7 Score=42.78 Aligned_cols=72 Identities=19% Similarity=0.170 Sum_probs=50.2
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC--CC-----------------Cc---ccC
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE--RN-----------------DR---SFG 447 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~--d~-----------------D~---~vg 447 (525)
.++||=+| ++.+|+..|+ +|+++|.|++..+.|++.-...-+. +. |. .+|
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 34777777 8889988899 9999999999998887642110010 00 22 233
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEE
Q 043102 448 HEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 448 ~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
-...++.+.++|++||++++-.
T Consensus 263 ---~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 263 ---VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp ---CHHHHHHHHHHEEEEEEEEECS
T ss_pred ---CHHHHHHHHHHhccCCEEEEEe
Confidence 2467888999999999998743
No 346
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=67.84 E-value=2.3 Score=42.20 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=47.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC--CCC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL--ERN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl--~d~---------------D~---~vg~~ 449 (525)
..+||-+| +..+++..|++|++++.|++.++.+++.-...-+ .+. |. .+|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g-- 218 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG-- 218 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc--
Confidence 34788777 5667766799999999999998888763110000 111 22 334
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
...++.+.++|++||++++-.
T Consensus 219 --~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 219 --RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp --GGGHHHHHHTEEEEEEEEECC
T ss_pred --hHHHHHHHHHhcCCCEEEEEe
Confidence 356788899999999987643
No 347
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=66.46 E-value=3.6 Score=41.54 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=49.5
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--CC--C--------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--ER--N--------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~d--~--------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ .+ . |. .+|.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~ 270 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGN 270 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCc
Confidence 34788877 7888888899 899999999999988753111000 00 0 22 2332
Q ss_pred ccHHHHHHHHHhccCCC-cEEEEE
Q 043102 449 EYMEEFFGCCESLIAKD-GLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpG-G~~viq 471 (525)
...++.+.++|+++ |++++-
T Consensus 271 ---~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 271 ---VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp ---HHHHHHHHHTBCTTTCEEEEC
T ss_pred ---HHHHHHHHHhhccCCcEEEEE
Confidence 35688899999999 999864
No 348
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=66.36 E-value=3.4 Score=41.79 Aligned_cols=71 Identities=17% Similarity=0.092 Sum_probs=49.4
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--CC--C--------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--ER--N--------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~d--~--------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ .+ . |. .+|.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~ 271 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR 271 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC
Confidence 35888887 7888888899 899999999999888753111000 00 0 22 2332
Q ss_pred ccHHHHHHHHHhccCCC-cEEEEE
Q 043102 449 EYMEEFFGCCESLIAKD-GLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpG-G~~viq 471 (525)
+..++.+.++|+++ |++++-
T Consensus 272 ---~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 272 ---IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp ---HHHHHHHHHTBCTTTCEEEEC
T ss_pred ---HHHHHHHHHHHhcCCCEEEEE
Confidence 45688899999999 999764
No 349
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=66.34 E-value=3.4 Score=41.45 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc---ccCccc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~---~vg~~~ 450 (525)
.++||-+| ++.+|+..|++|+++ .|++.++.+++.-... +... |. .+|.
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g~-- 226 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQGFDLVYDTLGG-- 226 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSCEEEEEESSCT--
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCCceEEEECCCc--
Confidence 34788777 778888889999999 9999998887642211 2111 22 4452
Q ss_pred HHHHHHHHHhccCCCcEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~vi 470 (525)
..++.+.++|+++|++++
T Consensus 227 --~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 227 --PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp --HHHHHHHHHEEEEEEEEE
T ss_pred --HHHHHHHHHHhcCCeEEE
Confidence 567888899999999986
No 350
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=65.63 E-value=2.6 Score=42.31 Aligned_cols=71 Identities=20% Similarity=0.265 Sum_probs=47.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC--CCC--------------Cc---ccCccc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL--ERN--------------DR---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl--~d~--------------D~---~vg~~~ 450 (525)
.++||=+| ++.+|+..|++|++++.|++.++.+++.-...-+ ... |. .+|.
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~-- 237 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG-- 237 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch--
Confidence 34777776 6788888899999999999999888764111000 000 22 3443
Q ss_pred HHHHHHHHHhccCCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~ 472 (525)
..++.+.++|++||++++-.
T Consensus 238 --~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 238 --PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ---CHHHHHHTEEEEEEEEEC-
T ss_pred --hHHHHHHHhhcCCCEEEEEE
Confidence 25778889999999998743
No 351
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=65.25 E-value=2.7 Score=42.76 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=50.2
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCCC--------C--------------Cc---
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLER--------N--------------DR--- 444 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~d--------~--------------D~--- 444 (525)
.++||=+| ++.+|+..|+ +|+++|.|++.++.|++. |.+. . |.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TCCEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCcEEEccccCchhHHHHHHHhcCCCCCEEEE
Confidence 34787777 7888888899 899999999999988753 3211 0 22
Q ss_pred ccCcccHHHHHHHHHhccCCC-cEEEEEEe
Q 043102 445 SFGHEYMEEFFGCCESLIAKD-GLFVLQFI 473 (525)
Q Consensus 445 ~vg~~~~~~~f~~i~r~LkpG-G~~viq~i 473 (525)
.+| -+..++.+.++|++| |++++-..
T Consensus 270 ~~g---~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 270 CIG---NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCC---CHHHHHHHHHHhhccCCEEEEEcc
Confidence 233 246788999999997 99987543
No 352
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=64.11 E-value=4.1 Score=41.20 Aligned_cols=71 Identities=15% Similarity=0.171 Sum_probs=49.1
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--CC--C--------------Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--ER--N--------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~d--~--------------D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-...-+ .+ . |. .+|.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 271 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR 271 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCC
Confidence 35788877 7788888899 899999999999988653111000 00 0 22 2332
Q ss_pred ccHHHHHHHHHhccCCC-cEEEEE
Q 043102 449 EYMEEFFGCCESLIAKD-GLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpG-G~~viq 471 (525)
+..++.+.++|++| |++++-
T Consensus 272 ---~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 272 ---LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp ---HHHHHHHHHHBCTTTCEEEEC
T ss_pred ---HHHHHHHHHHhhcCCcEEEEe
Confidence 35688889999999 999864
No 353
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=63.75 E-value=3.5 Score=40.97 Aligned_cols=70 Identities=13% Similarity=0.098 Sum_probs=46.7
Q ss_pred Ceehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC--CCCC---------------Cc---ccCccc
Q 043102 399 REVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD--LERN---------------DR---SFGHEY 450 (525)
Q Consensus 399 ~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g--l~d~---------------D~---~vg~~~ 450 (525)
.+||-+| +..+++..|++|++++.+++.++.+++.-...- ..+. |. .+|.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~-- 224 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-- 224 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT--
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH--
Confidence 4777777 567777779999999999998888865311000 0111 11 2332
Q ss_pred HHHHHHHHHhccCCCcEEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq~ 472 (525)
..++.+.++|++||++++-.
T Consensus 225 --~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 225 --DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp --TTHHHHHHTEEEEEEEEECC
T ss_pred --HHHHHHHHhhccCCEEEEEe
Confidence 46788889999999987643
No 354
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=63.36 E-value=4 Score=41.10 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=47.1
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC--CCCC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD--LERN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g--l~d~---------------D~---~vg~~ 449 (525)
.++||-+| ++.+++..|++|++++.|++.++.+++.-...- ..+. |. .+|..
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~ 242 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS 242 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCch
Confidence 34778777 667777789999999999999988854311000 0111 22 33432
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
.++.+.++|++||++++-.
T Consensus 243 ----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 243 ----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp ----GHHHHHHHEEEEEEEEECC
T ss_pred ----HHHHHHHhccCCCEEEEEe
Confidence 4677889999999998643
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=61.67 E-value=3.8 Score=40.77 Aligned_cols=66 Identities=14% Similarity=0.226 Sum_probs=47.4
Q ss_pred Ceehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC------CC---------------Cc---cc
Q 043102 399 REVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE------RN---------------DR---SF 446 (525)
Q Consensus 399 ~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~------d~---------------D~---~v 446 (525)
++||-+| ++.+|+..|++|++++.|++.++.+++.+ |.. +. |. .+
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 4778777 66777778999999999999988887432 221 10 11 22
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
|. ..++.+.++|++||++++-
T Consensus 234 g~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 234 GG----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CH----HHHHHHHTTEEEEEEEEEC
T ss_pred CH----HHHHHHHHHHhcCCEEEEE
Confidence 32 4788899999999999864
No 356
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=60.92 E-value=18 Score=39.13 Aligned_cols=40 Identities=10% Similarity=0.088 Sum_probs=31.9
Q ss_pred eehhhc------HHHHHHh----cCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 400 EVIFLG------TIEVVKR----TGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 400 rVLDIG------a~~lA~~----~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
+|||.+ .+.++++ ....++|+|+++..++.|+.++...|+
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred EEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 899988 4444443 257999999999999999998876666
No 357
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=60.67 E-value=11 Score=38.50 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=30.4
Q ss_pred CCCCeEEeccCCC-----CCCchhhhchHHHHHhhhcCCcccc
Q 043102 236 GRRGIWFRGAYQG-----YGFHEDGLKDLSINSCMTYGEECFF 273 (525)
Q Consensus 236 G~~~~~fcGay~g-----~GfHEdg~~Sgl~aA~~llG~~~pf 273 (525)
...+||.+|+=.. ++.-..|...|..||..++|...++
T Consensus 256 ~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~ 298 (385)
T 3klj_A 256 SIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASY 298 (385)
T ss_dssp SSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcCC
Confidence 3578999999764 5566789999999999999977554
No 358
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=60.61 E-value=2.9 Score=41.82 Aligned_cols=70 Identities=17% Similarity=0.274 Sum_probs=47.5
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--CCCCC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--DLERN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--gl~d~---------------D~---~vg~~ 449 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.-... ...+. |. .+|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g-- 244 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG-- 244 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC--
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC--
Confidence 34788887 67777778999999999999998886531000 00110 22 334
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
...++.+.++|+++|++++-
T Consensus 245 --~~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 245 --ALYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp --SSSHHHHHHHEEEEEEEEES
T ss_pred --HHHHHHHHHhhccCCEEEEE
Confidence 24577888999999998763
No 359
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=59.74 E-value=8.4 Score=38.54 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=29.9
Q ss_pred CCeehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHH
Q 043102 398 VREVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~ 432 (525)
++.+||.+ +..++++ +++|+|+|.+++.++.|++
T Consensus 23 gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh
Confidence 34788886 8888887 8999999999999999988
No 360
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=59.32 E-value=3 Score=43.48 Aligned_cols=31 Identities=10% Similarity=0.033 Sum_probs=22.2
Q ss_pred CCCeEEeccCCCCC-CchhhhchHHHHHhhhc
Q 043102 237 RRGIWFRGAYQGYG-FHEDGLKDLSINSCMTY 267 (525)
Q Consensus 237 ~~~~~fcGay~g~G-fHEdg~~Sgl~aA~~ll 267 (525)
-.|+|+||+|+..| --+.++.||..||+.+|
T Consensus 457 i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il 488 (501)
T 4dgk_A 457 ITNLYLVGAGTHPGAGIPGVIGSAKATAGLML 488 (501)
T ss_dssp CTTEEECCCH------HHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcccHHHHHHHHHHHHHHHH
Confidence 36899999998654 36788899999998874
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=59.04 E-value=4.1 Score=41.04 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=46.2
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCC------CC---------------Cc---c
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLE------RN---------------DR---S 445 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~------d~---------------D~---~ 445 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++. |.. +. |. .
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 34777777 6677777899999999999998877643 321 11 11 2
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEE
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
+|. ..++.+.++|++||++++-
T Consensus 247 ~G~----~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 247 LAN----VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CHH----HHHHHHHHHEEEEEEEEEC
T ss_pred CCh----HHHHHHHHhccCCCEEEEE
Confidence 222 3577888999999999864
No 362
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=58.92 E-value=5.5 Score=39.42 Aligned_cols=69 Identities=22% Similarity=0.328 Sum_probs=45.9
Q ss_pred Ceehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--CCCC-C--------------Cc---ccCccc
Q 043102 399 REVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--DLER-N--------------DR---SFGHEY 450 (525)
Q Consensus 399 ~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--gl~d-~--------------D~---~vg~~~ 450 (525)
.+||-+| +..+++..|++|++++.|++.++.+++.-... ...+ . |. .+|.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~-- 224 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG-- 224 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH--
T ss_pred CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh--
Confidence 4778777 56667667999999999999988884321000 0111 1 11 2332
Q ss_pred HHHHHHHHHhccCCCcEEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~viq 471 (525)
..++.+.++|++||++++-
T Consensus 225 --~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 225 --EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp --HHHHHHHTTEEEEEEEEEC
T ss_pred --HHHHHHHHHHhcCCEEEEE
Confidence 3578888999999999763
No 363
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=58.01 E-value=1.3 Score=44.42 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=45.3
Q ss_pred CCeehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHHH------HHH--HcC-----CCCC-------Cc--ccCc
Q 043102 398 VREVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAGI------KVK--EAD-----LERN-------DR--SFGH 448 (525)
Q Consensus 398 ~~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar~------r~~--~~g-----l~d~-------D~--~vg~ 448 (525)
..+||||| +.+++++.++ .|+|+|++..+...+.. .+. ..+ +... |. ..|.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~ 170 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESSPS 170 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCCSC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCCCC
Confidence 34999999 7777866565 79999998754322221 000 000 1111 22 3343
Q ss_pred ccHH-----HHHHHHHhccCCC--cEEEEEEec
Q 043102 449 EYME-----EFFGCCESLIAKD--GLFVLQFIS 474 (525)
Q Consensus 449 ~~~~-----~~f~~i~r~LkpG--G~~viq~i~ 474 (525)
...+ ..++-+.++|||| |.|++-...
T Consensus 171 ~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 171 IAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 2222 2377778999999 999996554
No 364
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.51 E-value=5.5 Score=39.56 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=47.0
Q ss_pred CCeehhhc-------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCCCCC--Cc---------------ccCcccHH
Q 043102 398 VREVIFLG-------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADLERN--DR---------------SFGHEYME 452 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--D~---------------~vg~~~~~ 452 (525)
.++||=+| +..+|+. .|++|+++|.|++.++.+++.-...-+.-+ |. .+...--.
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~ 243 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVAR 243 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSCH
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEeccCc
Confidence 34777777 5555554 488999999999988877755322111111 11 01001124
Q ss_pred HHHHHHHhccCCCcEEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq~ 472 (525)
..+....++|+++|++++-.
T Consensus 244 ~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 244 IAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HHHHHHHHTEEEEEEEEECC
T ss_pred chhheeheeecCCceEEEEe
Confidence 67888899999999998643
No 365
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=56.47 E-value=5.6 Score=39.51 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=49.3
Q ss_pred CCeehhhc-------HHHHHHhcCCE-EEEEcCChHHHHHHHHHHHHcCCCCC---------------------Cc---c
Q 043102 398 VREVIFLG-------TIEVVKRTGCK-YTGITLAEKQLKYAGIKVKEADLERN---------------------DR---S 445 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~-VtGIdlS~eql~~Ar~r~~~~gl~d~---------------------D~---~ 445 (525)
.++||=+| ++.+|+..|++ |+.+|.|++.++.|++. |.+.- |. .
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~ 236 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAMQTFNSSEMSAPQMQSVLRELRFNQLILET 236 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCSEEEETTTSCHHHHHHHHGGGCSSEEEEEC
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCeEEEeCCCCCHHHHHHhhcccCCccccccc
Confidence 34777777 77888888874 68999999988888754 32211 11 2
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
+| -+..++.+.++|++||++++-...
T Consensus 237 ~G---~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 237 AG---VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp SC---SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred cc---ccchhhhhhheecCCeEEEEEecc
Confidence 33 246788899999999999875443
No 366
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=55.41 E-value=13 Score=38.70 Aligned_cols=36 Identities=8% Similarity=0.112 Sum_probs=29.9
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHH
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIK 433 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r 433 (525)
.++||=+| ++.+|+..|++|+.++.|++.++.|++.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l 272 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM 272 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh
Confidence 34777776 7888888899999999999999988753
No 367
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=55.38 E-value=26 Score=36.14 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=29.3
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHH
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~ 432 (525)
.++||=+| ++.+|+..|++|+.++.|++.++.+++
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 45787777 778888889999999999999988865
No 368
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=53.77 E-value=20 Score=35.77 Aligned_cols=66 Identities=14% Similarity=0.282 Sum_probs=47.0
Q ss_pred Ceehhhc--------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCCC------CC--------------Cc---cc
Q 043102 399 REVIFLG--------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADLE------RN--------------DR---SF 446 (525)
Q Consensus 399 ~rVLDIG--------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl~------d~--------------D~---~v 446 (525)
.+||-+| ++.+++..|+ +|++++.+++.++.+++.+ |.. +. |. .+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDAAINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 4677777 6677777899 9999999998888876532 221 11 11 23
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
| ...++.+.++|++||++++-
T Consensus 239 G----~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 239 G----GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp C----HHHHHHHHHTEEEEEEEEEC
T ss_pred C----HHHHHHHHHHhccCcEEEEE
Confidence 4 26788899999999999863
No 369
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=52.65 E-value=11 Score=38.24 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=45.2
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC--------------------Cc---cc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN--------------------DR---SF 446 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~--------------------D~---~v 446 (525)
.++||=+| ++.+|+..|++|+++. |++.++.|++. |.+.- |. .+
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~ 239 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR----GAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI 239 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TCSEEEETTSTTHHHHHHHHTTTCCCEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc----CCcEEEECCCchHHHHHHHHccCCccEEEECC
Confidence 34777666 7888988899999985 88888877653 32110 22 33
Q ss_pred CcccHHHHHHHHHhcc-CCCcEEEE
Q 043102 447 GHEYMEEFFGCCESLI-AKDGLFVL 470 (525)
Q Consensus 447 g~~~~~~~f~~i~r~L-kpGG~~vi 470 (525)
|. +..++.+.+.| ++||++++
T Consensus 240 g~---~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 240 TN---VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp CS---HHHHHHHHHHSCTTCEEEEE
T ss_pred Cc---hHHHHHHHHHhhcCCCEEEE
Confidence 42 35677788888 69999876
No 370
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=51.59 E-value=32 Score=33.29 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=44.2
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH-------c--CCCC----------------------CCc---ccCcc--
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE-------A--DLER----------------------NDR---SFGHE-- 449 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~-------~--gl~d----------------------~D~---~vg~~-- 449 (525)
|..+++ .|.+|+.+|.+++.++.++++++. . ++.. .|- ++...
T Consensus 20 A~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi~av~~~~~ 98 (283)
T 4e12_A 20 AFQTAF-HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVKDADLVIEAVPESLD 98 (283)
T ss_dssp HHHHHH-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTTTCSEEEECCCSCHH
T ss_pred HHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhccCCEEEEeccCcHH
Confidence 555665 499999999999999988876421 1 1111 022 44433
Q ss_pred cHHHHHHHHHhccCCCcEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~vi 470 (525)
....+|+++...++|+..++-
T Consensus 99 ~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 99 LKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEE
Confidence 567889999999999887653
No 371
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=49.98 E-value=36 Score=33.94 Aligned_cols=117 Identities=11% Similarity=0.041 Sum_probs=68.6
Q ss_pred eehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC-----------------------Cc------
Q 043102 400 EVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN-----------------------DR------ 444 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~-----------------------D~------ 444 (525)
.|++|| +.++....+++|.-|| -++.++..++.+++.+.... |.
T Consensus 105 QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~ 183 (310)
T 2uyo_A 105 QFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTAW 183 (310)
T ss_dssp EEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEE
T ss_pred eEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEEE
Confidence 578888 4444421257888888 47777877777765432111 11
Q ss_pred -------ccCcccHHHHHHHHHhccCCCcEEEEEEecCCCcchhcc--cCch-hHHhhc-------ccCCCCCCC-HHHH
Q 043102 445 -------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIPDERYNEF--RLSS-DFMKEY-------IFPGGCLPS-LSRI 506 (525)
Q Consensus 445 -------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~~~--~~~~-~fi~kY-------IFPGg~LPs-l~~i 506 (525)
.+..+.....++.+...+.||+.+++..+.... .+... .... ..+++- +.|--..++ .+++
T Consensus 184 i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 262 (310)
T 2uyo_A 184 LAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG-DEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVV 262 (310)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC-SHHHHHHHHHHHHHHC-----------CCTTCCTTCCCH
T ss_pred EEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC-cchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHH
Confidence 233456778999999999999999998775432 11110 0001 112111 012223356 7788
Q ss_pred HHHHHhcCCcEEE
Q 043102 507 TSAMSAASRLWYN 519 (525)
Q Consensus 507 ~~~~~~a~gl~V~ 519 (525)
.+-+.+. ||++.
T Consensus 263 ~~~f~~~-G~~~~ 274 (310)
T 2uyo_A 263 ADWLNRH-GWRAT 274 (310)
T ss_dssp HHHHTTT-TEEEE
T ss_pred HHHHHHC-cCccc
Confidence 8888774 99887
No 372
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=49.54 E-value=25 Score=35.74 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=33.8
Q ss_pred HHHHHhccceeeec---cEEEEEecCCCceeeCccCCcccEE-EEeCCCceEeCCEEEEecChH
Q 043102 76 ELFESLGVDMEISD---MSFSLSLDKGQGCEWGSRNGLSSCT-VVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 76 ~~~~~~gv~~~~~~---~~~~v~~~~~~~~e~~s~~~~~gv~-v~~~~g~~e~fD~VV~A~had 135 (525)
+-.+..||++.... .+.++..+. .+|. |++.+|.+..+|.||+|+-+-
T Consensus 169 ~~a~~~Gv~i~~~t~~~~V~~i~~~~------------~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 169 REAQRMGVKFVTGTPQGRVVTLIFEN------------NDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHTTCEEEESTTTTCEEEEEEET------------TEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHhcCCEEEeCCcCceEEEEEecC------------CeEEEEEECCCCEEECCEEEECCCCC
Confidence 34455688887776 666664422 1455 777888778899999999775
No 373
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=46.40 E-value=5.2 Score=40.29 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=44.2
Q ss_pred Ceehhhc------HHHHHHhcCC-EEEEEcCChHHHHHHH-------HHH-HHcCCC-----CC-------Cc--ccCcc
Q 043102 399 REVIFLG------TIEVVKRTGC-KYTGITLAEKQLKYAG-------IKV-KEADLE-----RN-------DR--SFGHE 449 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~-~VtGIdlS~eql~~Ar-------~r~-~~~gl~-----d~-------D~--~vg~~ 449 (525)
.+||||| +..++++.++ .|+|+|++..+...+. ..+ -..+.+ .. |. ..|..
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APnsG~~ 162 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESSSNP 162 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSSH
T ss_pred CEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCCCCCH
Confidence 3999999 7777765554 8999999864311110 000 001111 11 32 33432
Q ss_pred cHH-----HHHHHHHhccCCC-cEEEEEEec
Q 043102 450 YME-----EFFGCCESLIAKD-GLFVLQFIS 474 (525)
Q Consensus 450 ~~~-----~~f~~i~r~LkpG-G~~viq~i~ 474 (525)
..+ ..++-+.++|+|| |.|++-...
T Consensus 163 ~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 163 LVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 222 2377778999999 999997553
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=45.97 E-value=11 Score=37.13 Aligned_cols=64 Identities=14% Similarity=0.140 Sum_probs=43.7
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC------C----------c---ccCccc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN------D----------R---SFGHEY 450 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~------D----------~---~vg~~~ 450 (525)
.++||=+| ++.+|+..|++|++++ |++..+.+++ .|.+.- | . .+|.
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-- 225 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAEQCINYHEEDFLLAISTPVDAVIDLVGG-- 225 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCSEEEETTTSCHHHHCCSCEEEEEESSCH--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCCEEEeCCCcchhhhhccCCCEEEECCCc--
Confidence 34777765 7888888899999987 6666666654 343211 2 2 3443
Q ss_pred HHHHHHHHHhccCCCcEEEE
Q 043102 451 MEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 451 ~~~~f~~i~r~LkpGG~~vi 470 (525)
+. ++.+.++|++||++++
T Consensus 226 -~~-~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 226 -DV-GIQSIDCLKETGCIVS 243 (321)
T ss_dssp -HH-HHHHGGGEEEEEEEEE
T ss_pred -HH-HHHHHHhccCCCEEEE
Confidence 23 3888999999999986
No 375
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=45.17 E-value=28 Score=33.09 Aligned_cols=48 Identities=10% Similarity=0.058 Sum_probs=32.2
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
.++++..|+++.. +...++..+. ..+.|.+.+|....||.||+||=+.
T Consensus 77 ~~~~~~~~v~~~~-~~v~~i~~~~------------~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 77 NKHIEKYEVPVLL-DIVEKIENRG------------DEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHTTTCCEEE-SCEEEEEEC--------------CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHcCCEEEE-EEEEEEEecC------------CEEEEEECCCCEEEcCEEEECcCCC
Confidence 4445556788777 5555554321 2467888888788999999998654
No 376
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=44.20 E-value=27 Score=33.67 Aligned_cols=47 Identities=6% Similarity=-0.113 Sum_probs=32.7
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEE-EEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCT-VVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~-v~~~~g~~e~fD~VV~A~ha 134 (525)
.++.+..|+++.......++..+. .++. |.+.+| +..||.||+||=+
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~------------~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFG------------ERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEET------------TEEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHHcCCEEEcCCEEEEEEECC------------CcEEEEEeCCC-EEEeCEEEECCCC
Confidence 344455688877776666664421 2467 777777 7899999999875
No 377
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=42.40 E-value=14 Score=37.59 Aligned_cols=75 Identities=13% Similarity=0.057 Sum_probs=50.9
Q ss_pred CCCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHH------cCC-C--------C-C-Cc---ccCc
Q 043102 397 KVREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKE------ADL-E--------R-N-DR---SFGH 448 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~------~gl-~--------d-~-D~---~vg~ 448 (525)
+.++||-+| ++.+|+..|+ +|++++.|++.++.|++.-.. ..+ . . . |. .+|.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 345899888 7888887899 999999999999888753110 000 0 0 0 22 3443
Q ss_pred cc-----------HHHHHHHHHhccCCCcEEEEE
Q 043102 449 EY-----------MEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~-----------~~~~f~~i~r~LkpGG~~viq 471 (525)
.. ....++.+.++|++||++++-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 265 EAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred ccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 21 134688899999999998754
No 378
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=41.95 E-value=53 Score=31.88 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=26.0
Q ss_pred eehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHH
Q 043102 400 EVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKV 434 (525)
Q Consensus 400 rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~ 434 (525)
+|.=|| |..+++. |.+|+.+|.+++.++.+++++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~i 58 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKKGI 58 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHH
Confidence 565566 5666664 999999999999998876543
No 379
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=41.29 E-value=22 Score=35.25 Aligned_cols=72 Identities=25% Similarity=0.232 Sum_probs=50.7
Q ss_pred CCCeehhhc-------HHHHHHhc--CCEEEEEcCChHHHHHHHHHHHHcCCC-------------C-C-Cc---ccCcc
Q 043102 397 KVREVIFLG-------TIEVVKRT--GCKYTGITLAEKQLKYAGIKVKEADLE-------------R-N-DR---SFGHE 449 (525)
Q Consensus 397 ~~~rVLDIG-------a~~lA~~~--G~~VtGIdlS~eql~~Ar~r~~~~gl~-------------d-~-D~---~vg~~ 449 (525)
+.++||-+| ++.+|+.. |++|++++.|++.++.|++.-...-++ . . |. .+|.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~- 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT- 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC-
Confidence 456888888 78889888 999999999999999887531000000 0 0 33 3342
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
+..++.+.++|+|||++++-
T Consensus 249 --~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 249 --EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp --HHHHHHHHHHEEEEEEEEEC
T ss_pred --hHHHHHHHHHhhcCCEEEEe
Confidence 34688889999999998763
No 380
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=40.94 E-value=31 Score=30.25 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=18.3
Q ss_pred cEEEEeCCCceEeCCEEEEecChH
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~had 135 (525)
++.|.+.+| +..+|.||+|+=..
T Consensus 87 ~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 87 VFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp SEEEECSSC-EEEEEEEEECCTTC
T ss_pred EEEEEECCC-EEEECEEEECCCCC
Confidence 467887787 78899999998543
No 381
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=40.66 E-value=28 Score=35.28 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=34.6
Q ss_pred ccHHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 72 PNMMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 72 Pn~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
....++|+.+++++.. +...++..+ + -.|...+|....||+||+||=+
T Consensus 61 ~~~~~~~~~~~i~~~~-~~v~~id~~-----------~---~~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 61 FRPEKFFQDQAIELIS-DRMVSIDRE-----------G---RKLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SSCHHHHHHTTEEEEC-CCEEEEETT-----------T---TEEEESSSCEEECSEEEECCCE
T ss_pred CCCHHHHHhCCCEEEE-EEEEEEECC-----------C---CEEEECCCCEEECCEEEEeeCC
Confidence 3456899999999987 665565331 1 1466677878899999999854
No 382
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.06 E-value=25 Score=35.31 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=27.9
Q ss_pred CCCeEEeccCCC-----CCCchhhhchHHHHHhhhcCCccc
Q 043102 237 RRGIWFRGAYQG-----YGFHEDGLKDLSINSCMTYGEECF 272 (525)
Q Consensus 237 ~~~~~fcGay~g-----~GfHEdg~~Sgl~aA~~llG~~~p 272 (525)
..+||-+|+=.. .++-..+...|..||+.++|.+.+
T Consensus 260 ~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~ 300 (367)
T 1xhc_A 260 AKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEPRR 300 (367)
T ss_dssp STTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCCcc
Confidence 578999999853 245567889999999999886533
No 383
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=39.99 E-value=23 Score=34.67 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=36.7
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh--HHHHHhhc
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA--PDALKILG 142 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha--dqAL~lL~ 142 (525)
|.+..+..|+++.....+.++..+. .++.|.+.+| +..+|+||+|+-+ .+-++.++
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~------------~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVD------------GAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEET------------TEEEEECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeC------------CeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 4444556688877666655554321 1467888777 6889999999866 44455555
No 384
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=39.50 E-value=22 Score=35.45 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=33.3
Q ss_pred Ceehhhc-----HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 399 REVIFLG-----TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 399 ~rVLDIG-----a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
+.|||-= +..+|.+.|.+.+|+|++++..+.|++|++.++.
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 3667753 5556666799999999999999999999987664
No 385
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=39.22 E-value=18 Score=36.47 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=44.1
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC------C------------Cc---ccCc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER------N------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d------~------------D~---~vg~ 448 (525)
.++||=+| ++.+|+..|++|++++ |++.++.+++ .|.+. . |. .+|.
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCCEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence 34777766 7788888899999998 7777777653 33211 0 22 3342
Q ss_pred ccHHHHHHHHHhccCCCcEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~vi 470 (525)
. ...++...++|++||++++
T Consensus 259 ~--~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 259 S--TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp T--HHHHGGGGBCSSSCCEEEE
T ss_pred h--hhhhHHHHHhhcCCcEEEE
Confidence 2 1345777889999999875
No 386
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=38.97 E-value=39 Score=32.72 Aligned_cols=57 Identities=9% Similarity=-0.053 Sum_probs=37.1
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCC--ceEeCCEEEEecChH--HHHHhh
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDG--SREFYNSCVMALHAP--DALKIL 141 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g--~~e~fD~VV~A~had--qAL~lL 141 (525)
|.+-.+..|+++..+..+.++..+.+ ..+.|.+.+| .+..+|.||+|+=+- +-++.+
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----------~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----------GGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----------SSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----------ceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 34445666888887777777755321 1256777777 367799999998554 444555
No 387
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=38.77 E-value=39 Score=36.91 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=35.8
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
|.+..++.|+++..+..+.++..+. .+|.|.+.+|.+..+|.||+|+-+.
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~------------~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKD------------DCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEET------------TEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeC------------CeEEEEECCCCEEECCEEEECCCcc
Confidence 3444456688887777777765422 1477888887788899999999776
No 388
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=38.49 E-value=38 Score=33.10 Aligned_cols=48 Identities=8% Similarity=-0.000 Sum_probs=32.2
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
.++.+..|+++.....+.++..+. .++.|.+.+| ...||.||+||=+.
T Consensus 95 ~~~~~~~gv~i~~~~~v~~i~~~~------------~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 95 QVVANHYELNIFENTVVTNISADD------------AYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECS------------SSEEEEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHcCCeEEeCCEEEEEEECC------------CeEEEEeCCC-EEEeCEEEECCCCC
Confidence 344456688877666666664421 1467777776 57899999998764
No 389
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=37.72 E-value=31 Score=35.14 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=33.5
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.++|+++|+++.......++..+ ...|...+|.+..||+||+||=+
T Consensus 64 ~~~~~~~~i~~~~~~~v~~id~~--------------~~~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 64 ADWYGEARIDMLTGPEVTALDVQ--------------TRTISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp TTHHHHTTCEEEESCCEEEEETT--------------TTEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEECC--------------CCEEEECCCCEEECCEEEEccCC
Confidence 57899999998877666666431 11466677878889999999843
No 390
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.66 E-value=61 Score=27.56 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=24.5
Q ss_pred eehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHH
Q 043102 400 EVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 400 rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~ 432 (525)
+|+=+| +..|.+ .|.+|+++|.+++.++.+++
T Consensus 9 ~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH
Confidence 677777 444444 59999999999999887765
No 391
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=37.66 E-value=15 Score=38.08 Aligned_cols=25 Identities=24% Similarity=0.181 Sum_probs=21.6
Q ss_pred Ceehhhc------HHHHHHhcCCEEEEEcCCh
Q 043102 399 REVIFLG------TIEVVKRTGCKYTGITLAE 424 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~~G~~VtGIdlS~ 424 (525)
.+|||+| +..++++ |++|++||+.+
T Consensus 213 ~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~ 243 (375)
T 4auk_A 213 MWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP 243 (375)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEECSSC
T ss_pred CEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh
Confidence 4899999 7778876 99999999875
No 392
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=37.56 E-value=15 Score=41.29 Aligned_cols=32 Identities=6% Similarity=-0.054 Sum_probs=27.3
Q ss_pred cCCCCeEEeccCCC--CCCchhhhchHHHHHhhh
Q 043102 235 QGRRGIWFRGAYQG--YGFHEDGLKDLSINSCMT 266 (525)
Q Consensus 235 qG~~~~~fcGay~g--~GfHEdg~~Sgl~aA~~l 266 (525)
+-.++++|||..+. -|+-|+|+.||++||..+
T Consensus 642 ~~~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i 675 (721)
T 3ayj_A 642 SLDNRFFIASDSYSHLGGWLEGAFMSALNAVAGL 675 (721)
T ss_dssp TTCCCEEECSGGGSSCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeehhhccCCceehHHHHHHHHHHHHH
Confidence 34689999999974 579999999999999665
No 393
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=37.50 E-value=80 Score=31.71 Aligned_cols=89 Identities=6% Similarity=0.045 Sum_probs=56.7
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH-------cCC-CCC---------------------Cc-----ccC--cc
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE-------ADL-ERN---------------------DR-----SFG--HE 449 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~-------~gl-~d~---------------------D~-----~vg--~~ 449 (525)
|..+|. .|.+|+-+|+++++++.|.+++++ .|. ... |+ +|. .+
T Consensus 22 A~~~a~-~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~~ad~ViEav~E~l~ 100 (319)
T 3ado_A 22 AMLFAS-GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLD 100 (319)
T ss_dssp HHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCHH
T ss_pred HHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhccCcEEeeccccHHH
Confidence 666676 499999999999999999887753 222 111 11 222 22
Q ss_pred cHHHHHHHHHhccCCCcEEEEEEecCCCcchh-cccCchhHHhhccc
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQFISIPDERYN-EFRLSSDFMKEYIF 495 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~i~~~~~~~~-~~~~~~~fi~kYIF 495 (525)
-..+.|+++.++++|+-.+.-.+-+++-.... .......++--+.|
T Consensus 101 iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~Hff 147 (319)
T 3ado_A 101 LKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPV 147 (319)
T ss_dssp HHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEEC
T ss_pred HHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCC
Confidence 34689999999999999998776665432221 12234455544433
No 394
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=37.19 E-value=42 Score=36.84 Aligned_cols=50 Identities=12% Similarity=0.116 Sum_probs=34.9
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCc-eEeCCEEEEecChH
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGS-REFYNSCVMALHAP 135 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~-~e~fD~VV~A~had 135 (525)
|.+..++.|+++.....+.++..+.+ +|.|.+.+|. ...+|.||+|+-+.
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~------------~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDS------------QWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSS------------SEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCC------------eEEEEeCCCcEEEECCEEEECCCcc
Confidence 33444566888877777777755321 4778888876 68899999999876
No 395
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=37.10 E-value=41 Score=32.02 Aligned_cols=51 Identities=18% Similarity=0.079 Sum_probs=31.1
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.++++..|+++.......++..+ ...+ ..+.|.+.+|....||.||+||=+
T Consensus 63 ~~~~~~~~v~~~~~~~v~~i~~~--------~~~~-~~~~v~~~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 63 KVHVDEYDVDVIDSQSASKLIPA--------AVEG-GLHQIETASGAVLKARSIIVATGA 113 (310)
T ss_dssp HHHHHTSCEEEECSCCEEEEECC--------SSTT-CCEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHcCCeEEccCEEEEEEec--------ccCC-ceEEEEECCCCEEEeCEEEECcCC
Confidence 34445556666555444444321 1111 246777788877899999999865
No 396
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=36.65 E-value=26 Score=35.55 Aligned_cols=73 Identities=15% Similarity=0.044 Sum_probs=50.5
Q ss_pred CCeehhhc-------HHHHHHhcCC-EEEEEcCChHHHHHHHHHHHHcCC--C--C------------C--Cc---ccCc
Q 043102 398 VREVIFLG-------TIEVVKRTGC-KYTGITLAEKQLKYAGIKVKEADL--E--R------------N--DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~-~VtGIdlS~eql~~Ar~r~~~~gl--~--d------------~--D~---~vg~ 448 (525)
.++||-+| ++.+|+..|+ +|+++|.|++.++.|++.-.. -+ . + + |. .+|.
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 45888887 7888988899 899999999999988753110 00 0 0 0 22 3342
Q ss_pred c------------cHHHHHHHHHhccCCCcEEEEE
Q 043102 449 E------------YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~------------~~~~~f~~i~r~LkpGG~~viq 471 (525)
. .....++.+.++|++||++++-
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 2 1234788999999999999764
No 397
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=35.09 E-value=53 Score=32.65 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=40.3
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChH----HHHHHHHHHHHcCCCC---------------------CCc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEK----QLKYAGIKVKEADLER---------------------NDR 444 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~e----ql~~Ar~r~~~~gl~d---------------------~D~ 444 (525)
.++||=+| ++.+|+..|++|+++.-+.+ ..+.|++ .|.+. -|.
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS----LGAEHVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH----TTCSEEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh----cCCcEEEecCcchHHHHHHHHhCCCCceE
Confidence 34777776 78889888998877764432 3445543 33210 022
Q ss_pred ---ccCcccHHHHHHHHHhccCCCcEEEEE
Q 043102 445 ---SFGHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 445 ---~vg~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
.+|.. . +....++|++||++++-
T Consensus 244 vid~~g~~---~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 244 ALNCVGGK---S-STELLRQLARGGTMVTY 269 (357)
T ss_dssp EEESSCHH---H-HHHHHTTSCTTCEEEEC
T ss_pred EEECCCcH---H-HHHHHHhhCCCCEEEEE
Confidence 33422 2 24578999999999764
No 398
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=34.96 E-value=54 Score=32.25 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=37.3
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEE-EEeCCCceEeCCEEEEecChH--HHHHhhc
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCT-VVCGDGSREFYNSCVMALHAP--DALKILG 142 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~-v~~~~g~~e~fD~VV~A~had--qAL~lL~ 142 (525)
|.+..++.|+++..+....++..+. .++. |.+.+| +..+|.||+|+-+- +-++.++
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~------------~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIEN------------NEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESS------------SBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHCCCEEECCceEEEEEEEC------------CEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 5566677789888777766665422 1344 666666 68899999999665 3344544
No 399
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=34.53 E-value=53 Score=33.74 Aligned_cols=49 Identities=10% Similarity=0.104 Sum_probs=33.7
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.+.+++.||++..+....++..+. .++.|...+|.+..+|.||+|+-.
T Consensus 214 l~~~l~~~Gv~i~~~~~V~~i~~~~------------~~v~v~~~~g~~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 214 AERVFKKQGLTIRTGVRVTAVVPEA------------KGARVELEGGEVLEADRVLVAVGR 262 (455)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEET------------TEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeC------------CEEEEEECCCeEEEcCEEEECcCC
Confidence 3455666688888777666664311 146677677877889999999754
No 400
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=34.53 E-value=30 Score=34.43 Aligned_cols=71 Identities=14% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC--CCC-C------------------Cc---cc
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD--LER-N------------------DR---SF 446 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g--l~d-~------------------D~---~v 446 (525)
.++||-+| ++.+|+..|++|++++.|++.++.+++.-...- ..+ . |. .+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~ 248 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCS 248 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECC
Confidence 35788777 788888889999999999999998875321100 010 1 11 22
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
| -+..++.+.++|+|||++++-
T Consensus 249 g---~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 249 G---NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp C---CHHHHHHHHHHSCTTCEEEEC
T ss_pred C---CHHHHHHHHHHHhcCCEEEEE
Confidence 2 235678889999999999864
No 401
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=34.40 E-value=45 Score=34.38 Aligned_cols=23 Identities=22% Similarity=0.066 Sum_probs=18.9
Q ss_pred cEEEEeCCCceEeCCEEEEecChH
Q 043102 112 SCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~had 135 (525)
++.|.+.+| ...+|.||+|+=+-
T Consensus 164 ~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 164 GFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp EEEEEETTE-EEEESEEEECCCCS
T ss_pred EEEEEECCc-EEEeeEEEECCCCc
Confidence 577888877 78899999998665
No 402
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=33.80 E-value=34 Score=34.69 Aligned_cols=47 Identities=28% Similarity=0.333 Sum_probs=33.9
Q ss_pred cHHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecC
Q 043102 73 NMMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALH 133 (525)
Q Consensus 73 n~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~h 133 (525)
...++|+.+|+++.......++..+ +..|...+|....||+||+||=
T Consensus 70 ~~~~~~~~~~i~~~~~~~v~~id~~--------------~~~v~~~~g~~~~~d~lvlAtG 116 (415)
T 3lxd_A 70 RPAQFWEDKAVEMKLGAEVVSLDPA--------------AHTVKLGDGSAIEYGKLIWATG 116 (415)
T ss_dssp SCHHHHHHTTEEEEETCCEEEEETT--------------TTEEEETTSCEEEEEEEEECCC
T ss_pred CCHHHHHHCCcEEEeCCEEEEEECC--------------CCEEEECCCCEEEeeEEEEccC
Confidence 3468899999998877666666331 1246667777888999999974
No 403
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=33.74 E-value=50 Score=34.85 Aligned_cols=52 Identities=10% Similarity=0.173 Sum_probs=33.3
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCc-eEeCCEEEEecC
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGS-REFYNSCVMALH 133 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~-~e~fD~VV~A~h 133 (525)
+.+.++..||++..+....++.-+.+.. ..++.|.+.+|+ +..+|.||+|+-
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~~--------v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANGR--------VQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTSB--------EEEEEEEETTEEEEEECSCEEECCC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCCc--------eEEEEEEECCCcEEEEcCEEEECcC
Confidence 3445566688887776666664321111 113677777886 678999999984
No 404
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=33.69 E-value=42 Score=32.50 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=28.3
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL 439 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl 439 (525)
|..+|++ |++|..+|.+++.++.+.+.+++.|-
T Consensus 24 A~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 24 AKKFALN-DSIVVAVELLEDRLNQIVQELRGMGK 56 (254)
T ss_dssp HHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 7788875 99999999999999998888877653
No 405
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=33.11 E-value=59 Score=33.54 Aligned_cols=47 Identities=15% Similarity=0.058 Sum_probs=30.8
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.+++.||++..+....++.-+ + .++.|...+|++..+|.||+|+-.
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~----------~--~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGE----------N--GKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEES----------S--SBEEEEEESSCEEECSEEEECSCE
T ss_pred HHHHhcCCEEEeCCEEEEEEcc----------C--CeEEEEEeCCCEEEcCEEEECCCC
Confidence 3445557877766555555331 1 135566677878899999999854
No 406
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=32.29 E-value=60 Score=32.44 Aligned_cols=48 Identities=21% Similarity=0.148 Sum_probs=31.4
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.+.++..|+++..+....++..+. .++.|...+|.+..+|.||+|+-.
T Consensus 194 ~~~l~~~gv~i~~~~~v~~i~~~~------------~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 194 QAGLEGLGVRFHLGPVLASLKKAG------------EGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHTTTCEEEESCCEEEEEEET------------TEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHcCCEEEeCCEEEEEEecC------------CEEEEEECCCCEEECCEEEECcCC
Confidence 334455577777666555553211 146677788878899999999853
No 407
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=32.12 E-value=52 Score=31.23 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=30.1
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.++++..|+++.. +...++..+ . +++.|...+|.+..||.||+|+=+
T Consensus 66 ~~~~~~~~v~~~~-~~v~~i~~~--------~----~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 66 QEQCFRFGLKHEM-TAVQRVSKK--------D----SHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHTTSCEEEC-SCEEEEEEE--------T----TEEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHcCCEEEE-EEEEEEEEc--------C----CEEEEEEcCCCEEECCEEEECCCC
Confidence 3445556777655 444444331 1 146676777878899999999875
No 408
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=32.06 E-value=23 Score=35.47 Aligned_cols=73 Identities=15% Similarity=0.059 Sum_probs=48.5
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC----C-C-------C-Cc---ccCcccHHHH
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL----E-R-------N-DR---SFGHEYMEEF 454 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl----~-d-------~-D~---~vg~~~~~~~ 454 (525)
.++||-+| ++.+|+..|++|++++.|++.++.|++.-...-+ + + . |. .+|... +..
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~-~~~ 258 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT-DID 258 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST-TCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc-HHH
Confidence 45888887 7788887899999999999999988763110000 0 0 0 22 333200 234
Q ss_pred HHHHHhccCCCcEEEEE
Q 043102 455 FGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 455 f~~i~r~LkpGG~~viq 471 (525)
++.+.++|++||++++-
T Consensus 259 ~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 259 FNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp TTTGGGGEEEEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEe
Confidence 66778999999998753
No 409
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=31.86 E-value=77 Score=31.97 Aligned_cols=48 Identities=17% Similarity=0.089 Sum_probs=30.9
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.+++.||++..+....++..++ +. -..|...+|++..+|.||+|+-.
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~----------~~-v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDG----------TK-VTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESS----------SB-EEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHhCCCEEEECCEEEEEEecC----------Cc-EEEEEeCCCCEEEcCEEEECCCC
Confidence 33445588887776666654321 11 12466678888899999999753
No 410
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=31.77 E-value=56 Score=31.97 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=35.8
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChHHHHHhhc
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAPDALKILG 142 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~hadqAL~lL~ 142 (525)
|.+..+..|+++.....+.++..+. .++.|.+.+| +..+|.||+|+-+- +-+++.
T Consensus 155 l~~~~~~~G~~i~~~~~V~~i~~~~------------~~~~v~~~~g-~~~a~~vV~a~G~~-s~~l~~ 209 (372)
T 2uzz_A 155 WIQLAKEAGCAQLFNCPVTAIRHDD------------DGVTIETADG-EYQAKKAIVCAGTW-VKDLLP 209 (372)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECS------------SSEEEEESSC-EEEEEEEEECCGGG-GGGTST
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEcC------------CEEEEEECCC-eEEcCEEEEcCCcc-HHhhcc
Confidence 3344455688887776666664421 1467777777 47899999999875 334443
No 411
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=31.45 E-value=55 Score=31.46 Aligned_cols=23 Identities=13% Similarity=0.127 Sum_probs=18.9
Q ss_pred cEEEEeCCCceEeCCEEEEecCh
Q 043102 112 SCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
++.|.+.+|....||.||+||=+
T Consensus 97 ~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 97 LFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp EEEEEETTSCEEEEEEEEECCTT
T ss_pred EEEEEECCCCEEEeCEEEECCCC
Confidence 46787778877889999999865
No 412
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=31.38 E-value=66 Score=33.38 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=32.2
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.+.++..||++..+....++..+. .++.|...+|.+..+|.||+|+-.
T Consensus 239 ~~~l~~~Gv~i~~~~~V~~i~~~~------------~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 239 NDAMVAKGISIIYEATVSQVQSTE------------NCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHTCEEESSCCEEEEEECS------------SSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEeeC------------CEEEEEECCCcEEEcCEEEEeeCC
Confidence 344455678877766655553311 246777788878889999999853
No 413
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=31.08 E-value=51 Score=31.71 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=28.6
Q ss_pred HHHhccccccchhccccCCCeehhhc---------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH
Q 043102 380 LFCLFLDESLTYSCALFKVREVIFLG---------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 380 ~y~l~Ld~~m~ys~a~f~~~rVLDIG---------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
.|.+|....|.....-+++..+|=.| +..++++ |++|+.++.+++.++.+.+.+.+
T Consensus 15 ~~~l~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~ 79 (281)
T 4dry_A 15 TENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGG 79 (281)
T ss_dssp -------------------CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH
T ss_pred cceEEEeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh
Confidence 44555544343322233445778777 6677775 99999999999887777666543
No 414
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=30.99 E-value=22 Score=34.77 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=45.0
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc------CCCCC-Cc---ccCcccHHHHHHHHHh
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA------DLERN-DR---SFGHEYMEEFFGCCES 460 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~------gl~d~-D~---~vg~~~~~~~f~~i~r 460 (525)
.++||=+| ++.+|+..|++|++++ |++.++++++.-... .+... |. .+|.+ .+..+.+
T Consensus 143 g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~----~~~~~~~ 217 (315)
T 3goh_A 143 QREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ----NAAALVP 217 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-----------TTGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch----hHHHHHH
Confidence 34787776 8889988899999999 999999987641110 01111 44 44432 2366789
Q ss_pred ccCCCcEEEEE
Q 043102 461 LIAKDGLFVLQ 471 (525)
Q Consensus 461 ~LkpGG~~viq 471 (525)
+|+|+|++++-
T Consensus 218 ~l~~~G~~v~~ 228 (315)
T 3goh_A 218 SLKANGHIICI 228 (315)
T ss_dssp GEEEEEEEEEE
T ss_pred HhcCCCEEEEE
Confidence 99999999864
No 415
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=30.73 E-value=75 Score=33.83 Aligned_cols=52 Identities=8% Similarity=0.015 Sum_probs=33.9
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCc--eEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGS--REFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~--~e~fD~VV~A~ha 134 (525)
.+-.+..||++..+....++..+.. .+..||.+.+.+|+ ...+|.||+||=.
T Consensus 262 ~~~~~~~gv~i~~~~~v~~l~~~~~--------g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 262 YDNAVKRNIDLRMNTRGIEVLKDDK--------GTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHTTCEEESSEEEEEEEECTT--------SCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHhcCCEEEeCCEeeEeEEcCC--------CeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 3344555888888887777765431 11236777665665 4668999999854
No 416
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=30.39 E-value=37 Score=33.95 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=29.4
Q ss_pred Ceehhh--c---HHHHHHhcCCEEEEEcCCh---HHHHHHHHHHHHcCC
Q 043102 399 REVIFL--G---TIEVVKRTGCKYTGITLAE---KQLKYAGIKVKEADL 439 (525)
Q Consensus 399 ~rVLDI--G---a~~lA~~~G~~VtGIdlS~---eql~~Ar~r~~~~gl 439 (525)
+.|||- | +..+|.+.|.+.+|+|+++ +.++.|++|++++|+
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~~ 292 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDGL 292 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC-----
T ss_pred CEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHccC
Confidence 367775 3 5556666799999999999 999999999987663
No 417
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=29.97 E-value=34 Score=32.64 Aligned_cols=47 Identities=6% Similarity=0.160 Sum_probs=30.4
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
++.+..|+++.......++..+ .+ .++.|.+.+|. ..||.||+||=+
T Consensus 75 ~~~~~~~~~~~~~~~v~~i~~~--------~~---~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 75 EQMAKFDQTICLEQAVESVEKQ--------AD---GVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHTTSCCEEECSCCEEEEEEC--------TT---SCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHhCCcEEccCEEEEEEEC--------CC---CcEEEEECCCE-EEeCEEEECCCC
Confidence 3334446776666665555432 11 25778888775 889999999865
No 418
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=29.45 E-value=50 Score=42.28 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=50.0
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC----C-----------------Cc---c
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER----N-----------------DR---S 445 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d----~-----------------D~---~ 445 (525)
.++||=.| ++.+|+..|++|++++-|++..+++++.....|... + |. .
T Consensus 1668 Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~ 1747 (2512)
T 2vz8_A 1668 GESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNS 1747 (2512)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEEC
T ss_pred CCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEEC
Confidence 34788775 788998889999999999999888887532222211 0 11 2
Q ss_pred cCcccHHHHHHHHHhccCCCcEEEE
Q 043102 446 FGHEYMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 446 vg~~~~~~~f~~i~r~LkpGG~~vi 470 (525)
++ ...++...++|++||+++.
T Consensus 1748 ~g----~~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1748 LA----EEKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp CC----HHHHHHHHTTEEEEEEEEE
T ss_pred CC----chHHHHHHHhcCCCcEEEE
Confidence 22 4678899999999999875
No 419
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=29.27 E-value=71 Score=32.33 Aligned_cols=47 Identities=26% Similarity=0.358 Sum_probs=30.9
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.++..||++..+....++.- ++ +...|...+|++..+|.||+|+-.
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~-----------~~-~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSG-----------EG-QLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEEC-----------SS-SCCEEEETTSCEEECSEEEECSCE
T ss_pred HHHHHCCCEEEeCCEEEEEec-----------cC-cEEEEEECCCCEEEcCEEEEeeCC
Confidence 334555888877666555532 11 123566778888899999999854
No 420
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=29.18 E-value=1.3e+02 Score=29.76 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=45.5
Q ss_pred eehhhc--------HHHHHHhcCC--EEEEEcCChHHHHHHHHHHHHcCC--------CC-C----Cc---ccCcccHHH
Q 043102 400 EVIFLG--------TIEVVKRTGC--KYTGITLAEKQLKYAGIKVKEADL--------ER-N----DR---SFGHEYMEE 453 (525)
Q Consensus 400 rVLDIG--------a~~lA~~~G~--~VtGIdlS~eql~~Ar~r~~~~gl--------~d-~----D~---~vg~~~~~~ 453 (525)
+|.=|| +..+++ .|. +|+++|.+++.++.+++. |. ++ - |- ++......+
T Consensus 35 kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~~~~~~a~~~----G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~ 109 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVDL----GIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE 109 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHHT----TSCSEEESCTTGGGGGCCSEEEECSCGGGHHH
T ss_pred EEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHC----CCcchhcCCHHHHhhccCCEEEEeCCHHHHHH
Confidence 566666 445554 487 999999999988776643 33 11 1 33 666677888
Q ss_pred HHHHHHhccCCCcEEE
Q 043102 454 FFGCCESLIAKDGLFV 469 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~v 469 (525)
+++++...|+||..++
T Consensus 110 vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 110 IAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHSCTTCEEE
T ss_pred HHHHHhhccCCCcEEE
Confidence 9999999999887553
No 421
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=28.84 E-value=62 Score=31.78 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=33.4
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
|.+..+..|+++.....+.++..+. .++.|.+.+| +..+|.||+|+-+-
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~------------~~~~v~~~~g-~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 156 YRELAEARGAKVLTHTRVEDFDISP------------DSVKIETANG-SYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECS------------SCEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHCCCEEEcCcEEEEEEecC------------CeEEEEeCCC-EEEeCEEEEecCcc
Confidence 4455566688887776666664421 1466777666 67899999999864
No 422
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=28.81 E-value=71 Score=33.29 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=31.4
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.++..||++..+....++.-+. .++.|.+.+|.+..+|.||+|+-.
T Consensus 231 ~~l~~~GV~i~~~~~V~~i~~~~------------~~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 231 ESFAERGVRLFKNARAASVTRTG------------AGVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp HHHHHTTCEEETTCCEEEEEECS------------SSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHCCCEEEeCCEEEEEEEeC------------CEEEEEECCCcEEEcCEEEECCCC
Confidence 44455678877766655553311 146777778878889999999754
No 423
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=28.68 E-value=94 Score=30.76 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=35.1
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH--HHHHhhc
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP--DALKILG 142 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had--qAL~lL~ 142 (525)
.+-.+..|+++.....+.++..+. .+|.|.+.+| +..+|.||+|+-+- .-++.|+
T Consensus 160 ~~~a~~~Gv~i~~~~~V~~i~~~~------------~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 160 FTLAQAAGATLRAGETVTELVPDA------------DGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEET------------TEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHcCCEEECCCEEEEEEEcC------------CeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcC
Confidence 333445588887776666664421 1467777666 67899999999764 3344444
No 424
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=28.52 E-value=50 Score=31.96 Aligned_cols=32 Identities=6% Similarity=-0.033 Sum_probs=27.7
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD 438 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g 438 (525)
+..+|++ |++|..++.+++.++.+.+.+++.|
T Consensus 26 a~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g 57 (255)
T 4g81_D 26 AEGLAAA-GARVILNDIRATLLAESVDTLTRKG 57 (255)
T ss_dssp HHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC
Confidence 7788875 9999999999999998888887765
No 425
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=28.31 E-value=42 Score=33.82 Aligned_cols=72 Identities=17% Similarity=0.190 Sum_probs=48.8
Q ss_pred CCeehhhc-------HHHHHHhcC-CEEEEEcCChHHHHHHHHHHHHcCC--C---CC---------------Cc---cc
Q 043102 398 VREVIFLG-------TIEVVKRTG-CKYTGITLAEKQLKYAGIKVKEADL--E---RN---------------DR---SF 446 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G-~~VtGIdlS~eql~~Ar~r~~~~gl--~---d~---------------D~---~v 446 (525)
.++||-+| ++.+|+..| ++|++++.|++.++.|++.-...-+ . +. |. .+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~ 275 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEAT 275 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECC
Confidence 34788877 788898889 5999999999999988743110000 0 00 22 33
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEE
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
|. +..++.+.++|++||++++-.
T Consensus 276 g~---~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 276 GD---SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp SC---TTHHHHHHHHEEEEEEEEECC
T ss_pred CC---HHHHHHHHHHHhcCCEEEEEe
Confidence 32 246788889999999987643
No 426
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=28.13 E-value=51 Score=33.84 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=29.5
Q ss_pred CCCeEEeccCCCC-CCchhhhchHHHHHhhhcCCccc
Q 043102 237 RRGIWFRGAYQGY-GFHEDGLKDLSINSCMTYGEECF 272 (525)
Q Consensus 237 ~~~~~fcGay~g~-GfHEdg~~Sgl~aA~~llG~~~p 272 (525)
..+++.|++|..- .| |+++.++..+-+++.|.+..
T Consensus 397 ~~~~~~~~~~d~~~~~-e~~~~~~~~~~~~~~~~~~~ 432 (433)
T 1d5t_A 397 ESQVFCSCSYDATTHF-ETTCNDIKDIYKRMAGSAFD 432 (433)
T ss_dssp TTCEEECCCCCSCSBS-HHHHHHHHHHHHHHHSSCCC
T ss_pred CCCEEECCCCCccccH-HHHHHHHHHHHHHHhCCcCC
Confidence 4789999999754 56 99999999999999887753
No 427
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=28.01 E-value=71 Score=34.17 Aligned_cols=48 Identities=15% Similarity=0.080 Sum_probs=31.1
Q ss_pred HHHHhcc--ceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 77 LFESLGV--DMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 77 ~~~~~gv--~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
+.+..|+ ++.....+.++ +|..+. .++.|.+.+|.+..||.||+||=.
T Consensus 108 ~~~~~g~~~~i~~~~~V~~i--------~~~~~~--~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 108 VADRFDLRRDIRFDTRVTSA--------VLDEEG--LRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHTTCGGGEECSCCEEEE--------EEETTT--TEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHcCCCccEEECCEEEEE--------EEcCCC--CEEEEEECCCCEEEeCEEEECcCC
Confidence 3445565 55555444444 343322 257888899988899999999873
No 428
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=27.94 E-value=75 Score=33.91 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=31.8
Q ss_pred HHHHHhcc--ceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 76 ELFESLGV--DMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 76 ~~~~~~gv--~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
++.+.+|+ ++.....+.++. |.... .++.|.+.+|.+..||.||+||=+
T Consensus 95 ~~~~~~g~~~~i~~~~~V~~i~--------~~~~~--~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 95 DVVDRFDLRRHFKFGTEVTSAL--------YLDDE--NLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHTTCGGGEEESCCEEEEE--------EETTT--TEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHcCCcceeEeccEEEEEE--------EeCCC--CEEEEEEcCCCEEEeCEEEECCcc
Confidence 33445566 555555544443 33321 257888888988899999999864
No 429
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=27.41 E-value=89 Score=31.43 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=30.6
Q ss_pred HHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 77 LFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 77 ~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.+++.||++..+....++..+++ +-..|...+|++..+|.||+|+-.
T Consensus 193 ~l~~~GV~i~~~~~v~~i~~~~~-----------~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 193 RHSGAGIRMHYGVRATEIAAEGD-----------RVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT-----------EEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHhCCcEEEECCEEEEEEecCC-----------cEEEEEeCCCCEEEcCEEEECcCC
Confidence 34455888877766555543211 112466788888899999999854
No 430
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=27.21 E-value=34 Score=34.54 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=24.5
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHH
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~ 432 (525)
++.+|+..|++|++++.|++.++.+++
T Consensus 188 a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 188 LNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 788898889999999999999998875
No 431
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=27.21 E-value=1.5e+02 Score=29.36 Aligned_cols=65 Identities=9% Similarity=0.145 Sum_probs=44.4
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHH-------HcCCCC----------------C------Cc-----ccCc--c
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVK-------EADLER----------------N------DR-----SFGH--E 449 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~-------~~gl~d----------------~------D~-----~vg~--~ 449 (525)
|..+++. |.+|+..|.+++.++.++++++ +.|+.. . |+ .|.. .
T Consensus 22 A~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~~aDlVieavpe~~~ 100 (319)
T 2dpo_A 22 AMLFASG-GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLD 100 (319)
T ss_dssp HHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCHH
T ss_pred HHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHHhcCCEEEEeccCCHH
Confidence 5666664 9999999999999999877642 234211 0 22 3332 2
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
-...+|+++...++||-.++-.
T Consensus 101 ~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 101 LKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp HHHHHHHHHHTTCCSSSEEEEC
T ss_pred HHHHHHHHHHhhCCCCeEEEEe
Confidence 3467899999999998876543
No 432
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=27.13 E-value=1.3e+02 Score=31.57 Aligned_cols=70 Identities=17% Similarity=0.180 Sum_probs=46.1
Q ss_pred eehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH-------cC-C-------------CCC------Cc
Q 043102 400 EVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE-------AD-L-------------ERN------DR 444 (525)
Q Consensus 400 rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~-------~g-l-------------~d~------D~ 444 (525)
+|.=|| |..+++ .|.+|+.+|.|++.++.++++++. .| + .+. |-
T Consensus 39 kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~aDl 117 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 117 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGTTCSE
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHCCCCE
Confidence 566666 556665 499999999999999888764321 11 0 000 22
Q ss_pred ---ccCcc--cHHHHHHHHHhccCCCcEEEE
Q 043102 445 ---SFGHE--YMEEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 445 ---~vg~~--~~~~~f~~i~r~LkpGG~~vi 470 (525)
+|... -...+|+++...++||..++.
T Consensus 118 VIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 118 VVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 44321 236889999999999887764
No 433
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=26.88 E-value=43 Score=33.44 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=29.8
Q ss_pred CCeehhhc-------HHHHHHhc-CCEEEEEcCChHHHHHHHH
Q 043102 398 VREVIFLG-------TIEVVKRT-GCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~-G~~VtGIdlS~eql~~Ar~ 432 (525)
.++||=+| ++.+|+.. |++|++++.|++.++.|++
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 45788777 78889888 9999999999999988875
No 434
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=26.74 E-value=94 Score=32.91 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=47.0
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHH-------cCC-C---------------CC------Cc---ccCcc--cH
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKE-------ADL-E---------------RN------DR---SFGHE--YM 451 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~-------~gl-~---------------d~------D~---~vg~~--~~ 451 (525)
|..+++ .|.+|+.+|.+++.++.+++++++ .|. . +. |- +|... -.
T Consensus 21 A~~la~-aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeAVpe~~~vk 99 (483)
T 3mog_A 21 AEVAAS-HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALAAADLVIEAASERLEVK 99 (483)
T ss_dssp HHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGGGGCSEEEECCCCCHHHH
T ss_pred HHHHHH-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHhcCCCEEEEcCCCcHHHH
Confidence 556666 499999999999999998876432 121 0 00 22 33322 34
Q ss_pred HHHHHHHHhccCCCcEEEEEEecCC
Q 043102 452 EEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
..+|+++...++|+..++..+-+.+
T Consensus 100 ~~v~~~l~~~~~~~~IlasntSti~ 124 (483)
T 3mog_A 100 KALFAQLAEVCPPQTLLTTNTSSIS 124 (483)
T ss_dssp HHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred HHHHHHHHHhhccCcEEEecCCCCC
Confidence 6889999999999988766554443
No 435
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=26.38 E-value=67 Score=31.39 Aligned_cols=23 Identities=9% Similarity=0.010 Sum_probs=19.4
Q ss_pred cEEEEeCCCceEeCCEEEEecCh
Q 043102 112 SCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.+.|.+.+|....||.||+|+=+
T Consensus 107 ~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 107 TFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp CEEEEETTSCEEEEEEEEECCTT
T ss_pred eEEEEECCCcEEEeeEEEEccCC
Confidence 46788888878899999999865
No 436
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=25.96 E-value=60 Score=33.20 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=16.5
Q ss_pred cEEEEeCC---Cc---eEeCCEEEEecCh
Q 043102 112 SCTVVCGD---GS---REFYNSCVMALHA 134 (525)
Q Consensus 112 gv~v~~~~---g~---~e~fD~VV~A~ha 134 (525)
++.|++.+ |. ++.||.||+|+=+
T Consensus 147 ~~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 147 SWVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp EEEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred eEEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 35565544 65 6789999999865
No 437
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=25.46 E-value=89 Score=31.83 Aligned_cols=52 Identities=4% Similarity=0.016 Sum_probs=31.5
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
|.+..+..||++..+....++..+.+ .++ .++.|.+.+| +..+|.||+||=+
T Consensus 115 L~~~~~~~Gv~i~~~~~v~~i~~~~~------g~~--~~~~v~~~~g-~i~ad~VVlAtG~ 166 (401)
T 2gqf_A 115 LKSECDKYGAKILLRSEVSQVERIQN------DEK--VRFVLQVNST-QWQCKNLIVATGG 166 (401)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECCS------CSS--CCEEEEETTE-EEEESEEEECCCC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEcccC------cCC--CeEEEEECCC-EEECCEEEECCCC
Confidence 33444555777776666665543210 001 1467777766 6889999999844
No 438
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=25.19 E-value=39 Score=32.71 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=46.2
Q ss_pred Ceehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC----------------Cc--ccCcccHH
Q 043102 399 REVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN----------------DR--SFGHEYME 452 (525)
Q Consensus 399 ~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~----------------D~--~vg~~~~~ 452 (525)
++||-+| ++.+|+..|++|++++.|++.++.+++. |.+.- |. .+|.
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~~~~~~~~~~~~~~~~~~d~vid~g~---- 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GAEEAATYAEVPERAKAWGGLDLVLEVRG---- 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TCSEEEEGGGHHHHHHHTTSEEEEEECSC----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCCEEEECCcchhHHHHhcCceEEEECCH----
Confidence 4777777 6778887899999999999988887642 32110 11 1221
Q ss_pred HHHHHHHhccCCCcEEEEE
Q 043102 453 EFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 453 ~~f~~i~r~LkpGG~~viq 471 (525)
..++.+.++|+++|++++-
T Consensus 199 ~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 199 KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp TTHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhhccCCEEEEE
Confidence 3678889999999998763
No 439
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=25.10 E-value=93 Score=32.14 Aligned_cols=48 Identities=23% Similarity=0.342 Sum_probs=32.5
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCc-eEeCCEEEEecC
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGS-REFYNSCVMALH 133 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~-~e~fD~VV~A~h 133 (525)
+.+.++..||++..+....++.-+. .++.|...+|+ +..+|.||+|+-
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~------------~~~~v~~~~G~~~i~~D~vv~a~G 261 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDA------------QGTTLVAQDGTRLEGFDSVIWAVG 261 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEET------------TEEEEEETTCCEEEEESEEEECSC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC------------CeEEEEEeCCcEEEEcCEEEECCC
Confidence 3455566688887776665553311 13667777887 788999999974
No 440
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=24.52 E-value=98 Score=32.91 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=34.3
Q ss_pred HHHHHhccceeeeccEEEEEecC-CCceeeCccCCcccEEEEeCCCc--eEeCCEEEEecChH
Q 043102 76 ELFESLGVDMEISDMSFSLSLDK-GQGCEWGSRNGLSSCTVVCGDGS--REFYNSCVMALHAP 135 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~-~~~~e~~s~~~~~gv~v~~~~g~--~e~fD~VV~A~had 135 (525)
+-.+..||++..+....++..++ | +..||.+.+.+|+ ...+|.||+||=.-
T Consensus 258 ~~~~~~gv~i~~~~~v~~l~~~~~g---------~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 258 KAAKEQGIDTRLNSRVVKLVVNDDH---------SVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHTTCCEECSEEEEEEEECTTS---------BEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHhcCCEEEeCCEEEEEEECCCC---------cEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 44455689998888877776543 2 1236777766675 45689999998653
No 441
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=24.36 E-value=94 Score=31.92 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecC
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALH 133 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~h 133 (525)
.+.++..||++..+....++.-+. ++ .+.|...+|++..+|.||+|+-
T Consensus 215 ~~~l~~~Gv~i~~~~~v~~i~~~~---------~~--~~~v~~~~g~~i~~D~vv~a~G 262 (450)
T 1ges_A 215 VEVMNAEGPQLHTNAIPKAVVKNT---------DG--SLTLELEDGRSETVDCLIWAIG 262 (450)
T ss_dssp HHHHHHHSCEEECSCCEEEEEECT---------TS--CEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC---------Cc--EEEEEECCCcEEEcCEEEECCC
Confidence 444566688887776666663311 11 2567777887788999999974
No 442
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=24.22 E-value=1.1e+02 Score=32.80 Aligned_cols=51 Identities=14% Similarity=0.086 Sum_probs=33.4
Q ss_pred HHHHHHhccceeeeccEEEEEecC-CCceeeCccCCcccEEEEeCCCc--eEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDK-GQGCEWGSRNGLSSCTVVCGDGS--REFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~-~~~~e~~s~~~~~gv~v~~~~g~--~e~fD~VV~A~ha 134 (525)
.+-.+..||++..+....++..++ | +..||.+.+.+|+ ...+|.||+||=.
T Consensus 262 ~~~~~~~gv~i~~~t~v~~l~~~~~g---------~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 262 WDNAVKRGTDIRLNSRVVRILEDASG---------KVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHTTCEEESSEEEEEEEEC--C---------CEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHcCCeEEecCEEEEEEECCCC---------eEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 334455689988888777775543 2 1236777665664 3568999999853
No 443
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=24.14 E-value=94 Score=29.56 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=29.6
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEe---CCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVC---GDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~---~~g~~e~fD~VV~A~ha 134 (525)
.++.+..|+++.... ..++..+. .++.+.+ .++....||.||+|+=+
T Consensus 91 ~~~~~~~gv~i~~~~-v~~i~~~~------------~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 91 REQSTKFGTEIITET-VSKVDLSS------------KPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHTTCEEECSC-EEEEECSS------------SSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHcCCEEEEeE-EEEEEEcC------------CEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 344455578776655 55553321 2466666 36667889999999865
No 444
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=24.13 E-value=80 Score=32.73 Aligned_cols=49 Identities=16% Similarity=0.205 Sum_probs=28.8
Q ss_pred HHHHHHhccc--eeeeccEEEEEecCCCceeeCccCCcccEEEEeCC---C--ceEeCCEEEEecC
Q 043102 75 MELFESLGVD--MEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGD---G--SREFYNSCVMALH 133 (525)
Q Consensus 75 ~~~~~~~gv~--~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~---g--~~e~fD~VV~A~h 133 (525)
.++.+..|++ +..+..+.+|..+.+ . .++.|...+ | .++.||.||+||=
T Consensus 108 ~~~~~~~gv~~~i~~~~~V~~v~~~~~--------~--~~~~V~~~~~~~g~~~~~~~d~VVvAtG 163 (464)
T 2xve_A 108 KGRVEKAGVRKYIRFNTAVRHVEFNED--------S--QTFTVTVQDHTTDTIYSEEFDYVVCCTG 163 (464)
T ss_dssp HHHHHHHTCGGGEECSEEEEEEEEETT--------T--TEEEEEEEETTTTEEEEEEESEEEECCC
T ss_pred HHHHHHcCCcceEEeCCEEEEEEEcCC--------C--CcEEEEEEEcCCCceEEEEcCEEEECCC
Confidence 3444555776 666666666654321 1 134454433 4 4578999999986
No 445
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=23.95 E-value=73 Score=32.60 Aligned_cols=46 Identities=15% Similarity=0.197 Sum_probs=31.4
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.++|+..|+++.......++..+ + -.|...+|.+..||.||+||=+
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~-----------~---~~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRD-----------R---QQVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETT-----------T---TEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-----------C---CEEEECCCCEEECCEEEEcCCC
Confidence 57888889888776655555331 1 1355567777889999998743
No 446
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=23.83 E-value=36 Score=33.36 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=46.0
Q ss_pred eehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCC--CC-----------C--Cc---ccCcccHHH
Q 043102 400 EVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADL--ER-----------N--DR---SFGHEYMEE 453 (525)
Q Consensus 400 rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl--~d-----------~--D~---~vg~~~~~~ 453 (525)
+||-+| ++.+|+..|++|++++.|++.++.+++.-...-+ .+ . |. .+|. .
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~----~ 227 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG----R 227 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT----T
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH----H
Confidence 566666 7788888899999999999988888753110000 00 0 22 3443 2
Q ss_pred HHHHHHhccCCCcEEEEE
Q 043102 454 FFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 454 ~f~~i~r~LkpGG~~viq 471 (525)
.++.+.++|++||++++-
T Consensus 228 ~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 228 TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp THHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhhccCCEEEEE
Confidence 477788999999999864
No 447
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=23.81 E-value=56 Score=32.62 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=48.3
Q ss_pred CCeehhhc-------HHHHHHhcCCEEEEEcCCh---HHHHHHHHHHHHc----CCC-------CC-Cc---ccCcccHH
Q 043102 398 VREVIFLG-------TIEVVKRTGCKYTGITLAE---KQLKYAGIKVKEA----DLE-------RN-DR---SFGHEYME 452 (525)
Q Consensus 398 ~~rVLDIG-------a~~lA~~~G~~VtGIdlS~---eql~~Ar~r~~~~----gl~-------d~-D~---~vg~~~~~ 452 (525)
..+||-+| ++.+|+..|++|++++.|+ +.++.+++.-... .+. .. |. .+|..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 257 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD--- 257 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh---
Confidence 45888887 6778877899999999998 8888776531100 000 01 33 34432
Q ss_pred HHH-HHHHhccCCCcEEEEEE
Q 043102 453 EFF-GCCESLIAKDGLFVLQF 472 (525)
Q Consensus 453 ~~f-~~i~r~LkpGG~~viq~ 472 (525)
..+ +.+.++|+++|++++-.
T Consensus 258 ~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 258 VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp THHHHHHGGGEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCEEEEEe
Confidence 356 88899999999987643
No 448
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.80 E-value=1.9e+02 Score=27.50 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=40.1
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCCC---------Cc---ccCcccHHHHHHHHHhccCCCcEEE
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLERN---------DR---SFGHEYMEEFFGCCESLIAKDGLFV 469 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d~---------D~---~vg~~~~~~~f~~i~r~LkpGG~~v 469 (525)
+..+++ .|.+|+.+|.+++..+.+++ .|+... |. .+........++++...|+||..++
T Consensus 28 a~~l~~-~g~~V~~~~r~~~~~~~~~~----~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 28 TRKIHD-SAHHLAAIEIAPEGRDRLQG----MGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHH-SSSEEEEECCSHHHHHHHHH----TTCCCCCSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHh-CCCEEEEEECCHHHHHHHHh----cCCCcCCHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEE
Confidence 445555 48999999999988776654 233211 33 5555567888888888888876554
No 449
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=23.69 E-value=1.2e+02 Score=31.59 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=25.7
Q ss_pred eehhhc------HHHHHHhcCCEEEEEcCChHHHHHHHH
Q 043102 400 EVIFLG------TIEVVKRTGCKYTGITLAEKQLKYAGI 432 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G~~VtGIdlS~eql~~Ar~ 432 (525)
.|+=+| |..+|+. |.+|+++|++++.++..++
T Consensus 15 ~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 15 TVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp EEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHT
T ss_pred EEEeeCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHC
Confidence 555556 7788875 9999999999998887765
No 450
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=23.60 E-value=1e+02 Score=31.61 Aligned_cols=23 Identities=22% Similarity=0.150 Sum_probs=17.4
Q ss_pred EEEEeCCCceEeCCEEEEecChH
Q 043102 113 CTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 113 v~v~~~~g~~e~fD~VV~A~had 135 (525)
+.|.+.+|....+|.||+||=+-
T Consensus 168 ~~V~~~~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 168 KAVILQTGEVLETNHVVIAVGGK 190 (447)
T ss_dssp EEEEETTCCEEECSCEEECCCCS
T ss_pred EEEEECCCCEEECCEEEECCCCC
Confidence 45666777667899999998654
No 451
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=23.39 E-value=2.1e+02 Score=28.58 Aligned_cols=114 Identities=15% Similarity=0.196 Sum_probs=68.1
Q ss_pred Ceehhhc------HHHHHHh-cCCEEEEEcCChHHHHHHHHHHHHcCC--------------------CCC------Cc-
Q 043102 399 REVIFLG------TIEVVKR-TGCKYTGITLAEKQLKYAGIKVKEADL--------------------ERN------DR- 444 (525)
Q Consensus 399 ~rVLDIG------a~~lA~~-~G~~VtGIdlS~eql~~Ar~r~~~~gl--------------------~d~------D~- 444 (525)
..|+.+| +.++... .++++.-||+ ++.++.-++.+++.+. .++ |.
T Consensus 99 ~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 99 VQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp EEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred cEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 3788888 6777754 4788999998 7788887777766420 111 11
Q ss_pred ----------------------------ccCcccHHHHHHHHHhccCCCcEEEEEEecCC---CcchhcccCchhHH---
Q 043102 445 ----------------------------SFGHEYMEEFFGCCESLIAKDGLFVLQFISIP---DERYNEFRLSSDFM--- 490 (525)
Q Consensus 445 ----------------------------~vg~~~~~~~f~~i~r~LkpGG~~viq~i~~~---~~~~~~~~~~~~fi--- 490 (525)
.+..+.....++.+.+.+ |+|.+++-+...+ ...+.. ....-+
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~--~m~~~l~~~ 254 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGA--IMQSNLKES 254 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHH--HHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHH--HHHHHhhcc
Confidence 112456678888888877 6777754333333 112211 001111
Q ss_pred hhcccCCC-CCCCHHHHHHHHHhcCCcE
Q 043102 491 KEYIFPGG-CLPSLSRITSAMSAASRLW 517 (525)
Q Consensus 491 ~kYIFPGg-~LPsl~~i~~~~~~a~gl~ 517 (525)
+.-.+++. ..|++++..+.+.++ ||.
T Consensus 255 rg~~l~~~~~y~s~~~~~~rl~~~-Gf~ 281 (334)
T 1rjd_A 255 RNLEMPTLMTYNSKEKYASRWSAA-PNV 281 (334)
T ss_dssp HCCCCTTTTTTCSHHHHHGGGTTS-SEE
T ss_pred cCCcccccccCCCHHHHHHHHHHC-CCC
Confidence 11234554 568999988888875 887
No 452
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=23.33 E-value=46 Score=33.16 Aligned_cols=71 Identities=14% Similarity=0.088 Sum_probs=49.0
Q ss_pred Ceehhhc-------H-HHHH-HhcCCE-EEEEcCChH---HHHHHHHHHHHc-CCCC-----------C-Cc---ccCcc
Q 043102 399 REVIFLG-------T-IEVV-KRTGCK-YTGITLAEK---QLKYAGIKVKEA-DLER-----------N-DR---SFGHE 449 (525)
Q Consensus 399 ~rVLDIG-------a-~~lA-~~~G~~-VtGIdlS~e---ql~~Ar~r~~~~-gl~d-----------~-D~---~vg~~ 449 (525)
++||=+| + +.+| +..|++ |++++.|++ .++.|++.-... ...+ . |. .+|.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~g~- 252 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGF- 252 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECSCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECCCC-
Confidence 5788877 7 8899 878997 999999998 888887531100 0000 1 22 3332
Q ss_pred cHHHHHHHHHhccCCCcEEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
+..++.+.++|++||++++-.
T Consensus 253 --~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 253 --PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp --HHHHHHHHHHEEEEEEEEECC
T ss_pred --hHHHHHHHHHHhcCCEEEEEe
Confidence 356888999999999987643
No 453
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=22.98 E-value=1.1e+02 Score=32.12 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=31.5
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecC
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALH 133 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~h 133 (525)
.+.++..||++..+....++.-+. ++ .+.|...+|++..+|.||+|+-
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~---------~~--~~~v~~~~G~~i~~D~vv~a~G 289 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNT---------DG--SKHVTFESGKTLDVDVVMMAIG 289 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECT---------TS--CEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcC---------Cc--eEEEEECCCcEEEcCEEEECCC
Confidence 344555688887776665553321 11 2566677887788999999974
No 454
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=22.89 E-value=1.1e+02 Score=34.26 Aligned_cols=28 Identities=11% Similarity=0.131 Sum_probs=22.3
Q ss_pred cEEE-EeCCCc--eEeCCEEEEecChHHHHH
Q 043102 112 SCTV-VCGDGS--REFYNSCVMALHAPDALK 139 (525)
Q Consensus 112 gv~v-~~~~g~--~e~fD~VV~A~hadqAL~ 139 (525)
.|.| .+.+|. +..||+||+|++......
T Consensus 387 ~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~ 417 (721)
T 3ayj_A 387 AQLLSYDSHNAVHSEAYDFVILAVPHDQLTP 417 (721)
T ss_dssp EEEEEEETTCCEEEEEESEEEECSCHHHHHH
T ss_pred eEEEEEecCCceEEEEcCEEEECCCHHHHhh
Confidence 5888 556676 678999999999987754
No 455
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.88 E-value=60 Score=31.83 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=30.1
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
.+..++.|+++.....+.++..+. .++.|.+.+| ...+|.||+|+-+.
T Consensus 171 ~~~~~~~g~~i~~~~~v~~i~~~~------------~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 171 VKAAKMLGAEIFEHTPVLHVERDG------------EALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHTTCEEETTCCCCEEECSS------------SSEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHCCCEEEcCCcEEEEEEEC------------CEEEEEcCCc-eEEcCEEEECCChh
Confidence 334445577776655555553321 1456677766 68899999999774
No 456
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=22.82 E-value=1.1e+02 Score=32.36 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=44.2
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHH------------HH---c-CCC--CC--------Cc---ccCc--------
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKV------------KE---A-DLE--RN--------DR---SFGH-------- 448 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~------------~~---~-gl~--d~--------D~---~vg~-------- 448 (525)
|..+|+. |.+|+++|.+++.++..++.. ++ . .+. .. |. .|+.
T Consensus 24 A~~la~~-G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~ 102 (478)
T 2y0c_A 24 GACLADI-GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSA 102 (478)
T ss_dssp HHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSB
T ss_pred HHHHHhC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCc
Confidence 6677774 999999999999888776531 10 0 110 00 22 4444
Q ss_pred --ccHHHHHHHHHhccCCCcEEEEEE
Q 043102 449 --EYMEEFFGCCESLIAKDGLFVLQF 472 (525)
Q Consensus 449 --~~~~~~f~~i~r~LkpGG~~viq~ 472 (525)
......++.+...|+||-.++..+
T Consensus 103 dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 103 DLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp CCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 577888999999999987665433
No 457
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=22.54 E-value=99 Score=32.22 Aligned_cols=48 Identities=17% Similarity=0.355 Sum_probs=30.6
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecC
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALH 133 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~h 133 (525)
.+.++..||++..+....++.-+. ++ .+.|...+|++..+|.||+|+-
T Consensus 238 ~~~l~~~GV~i~~~~~v~~i~~~~---------~~--~~~v~~~~G~~i~~D~vv~a~G 285 (490)
T 1fec_A 238 TEQLRANGINVRTHENPAKVTKNA---------DG--TRHVVFESGAEADYDVVMLAIG 285 (490)
T ss_dssp HHHHHHTTEEEEETCCEEEEEECT---------TS--CEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcC---------CC--EEEEEECCCcEEEcCEEEEccC
Confidence 344455577777666555553311 11 2566777887788999999974
No 458
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=22.33 E-value=60 Score=32.09 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=47.5
Q ss_pred CCeehhhc--------HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc--CCCCC---------------Cc---ccCcc
Q 043102 398 VREVIFLG--------TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEA--DLERN---------------DR---SFGHE 449 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~--gl~d~---------------D~---~vg~~ 449 (525)
..+||-+| +..+++..|++|++++.|++.++.+++.-... .+.+. |. .+|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g-- 247 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV-- 247 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS--
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC--
Confidence 35788887 56677767999999999999888776531100 01111 11 122
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
-...++.+.+.|++||++++-
T Consensus 248 -~~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 248 -SEAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp -CHHHHHHHTTSEEEEEEEEEC
T ss_pred -cHHHHHHHHHHHhcCCEEEEE
Confidence 236788899999999998764
No 459
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=22.19 E-value=77 Score=29.84 Aligned_cols=50 Identities=16% Similarity=0.044 Sum_probs=30.7
Q ss_pred HHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCc--eEeCCEEEEecChH
Q 043102 77 LFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGS--REFYNSCVMALHAP 135 (525)
Q Consensus 77 ~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~--~e~fD~VV~A~had 135 (525)
+.+..||++..+....++.-+.+ +..++.+...+|+ +..+|.||+|+-..
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~~~---------~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGDKM---------GVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEETT---------EEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHhcCCeEEEeCcEEEEEEcCCC---------cEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 33455777776666666643221 2235666655675 56799999997643
No 460
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=22.19 E-value=61 Score=32.59 Aligned_cols=19 Identities=21% Similarity=0.401 Sum_probs=16.9
Q ss_pred HHHHHHHHhccCCCcEEEE
Q 043102 452 EEFFGCCESLIAKDGLFVL 470 (525)
Q Consensus 452 ~~~f~~i~r~LkpGG~~vi 470 (525)
+++|+.++++|+|||+++-
T Consensus 206 ~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 206 LDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCcEEEE
Confidence 5899999999999999863
No 461
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=21.86 E-value=1.7e+02 Score=27.66 Aligned_cols=64 Identities=11% Similarity=0.117 Sum_probs=41.6
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHH-H----------------HcCCC----CCCc---ccCcccHHHHHHHHHhc
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKV-K----------------EADLE----RNDR---SFGHEYMEEFFGCCESL 461 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~-~----------------~~gl~----d~D~---~vg~~~~~~~f~~i~r~ 461 (525)
+..+++ .|.+|+.+|.+++.++..++.- . ...+. +.|. .+........++.+...
T Consensus 19 a~~l~~-~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~ 97 (316)
T 2ew2_A 19 GIMLHQ-GGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPM 97 (316)
T ss_dssp HHHHHH-TTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSCHHHHHHHHHHHGGG
T ss_pred HHHHHh-CCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEeccccHHHHHHHHHHh
Confidence 555665 4899999999998887766531 0 00011 1133 45555677888889899
Q ss_pred cCCCcEEEE
Q 043102 462 IAKDGLFVL 470 (525)
Q Consensus 462 LkpGG~~vi 470 (525)
|+|+..++.
T Consensus 98 l~~~~~iv~ 106 (316)
T 2ew2_A 98 ITEKTYVLC 106 (316)
T ss_dssp CCTTCEEEE
T ss_pred cCCCCEEEE
Confidence 988876554
No 462
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.82 E-value=86 Score=32.11 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=28.5
Q ss_pred HHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCC-ceEeCCEEEEecCh
Q 043102 75 MELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDG-SREFYNSCVMALHA 134 (525)
Q Consensus 75 ~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g-~~e~fD~VV~A~ha 134 (525)
.++++..|+++......+ + +. ..+.|.+.+| .+..||+||+||=+
T Consensus 98 ~~~~~~~gv~~~~g~~~~-i--d~------------~~v~V~~~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 98 EGLLKGNKVEIVKGEAYF-V--DA------------NTVRVVNGDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHTTTCEEEESEEEE-E--ET------------TEEEEEETTEEEEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEEEEEEE-c--cC------------CeEEEEeCCCcEEEEeCEEEEecCC
Confidence 456666778876555433 2 11 1466766666 56789999999854
No 463
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=21.81 E-value=47 Score=33.98 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=17.8
Q ss_pred EEEeCCCceEeCCEEEEecCh
Q 043102 114 TVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 114 ~v~~~~g~~e~fD~VV~A~ha 134 (525)
+|++++|.+..||.+|+||=+
T Consensus 87 ~V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 87 TVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp EEEETTCCEEECSEEEECCCC
T ss_pred EEEECCCCEEECCEEEEeCCC
Confidence 577788888899999999865
No 464
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=21.48 E-value=63 Score=31.90 Aligned_cols=71 Identities=17% Similarity=0.320 Sum_probs=47.9
Q ss_pred CCeehhhc--------HHHHHHhc-CCEEEEEcCChHHHHHHHHHHHHcCC--CCC---------------Cc---ccCc
Q 043102 398 VREVIFLG--------TIEVVKRT-GCKYTGITLAEKQLKYAGIKVKEADL--ERN---------------DR---SFGH 448 (525)
Q Consensus 398 ~~rVLDIG--------a~~lA~~~-G~~VtGIdlS~eql~~Ar~r~~~~gl--~d~---------------D~---~vg~ 448 (525)
.++||-+| ++.+++.. |++|++++.|++.++.+++.-...-+ .+. |. .+|
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g- 249 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN- 249 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCC-
Confidence 45888887 66777777 99999999999999888653110000 000 11 222
Q ss_pred ccHHHHHHHHHhccCCCcEEEEE
Q 043102 449 EYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 449 ~~~~~~f~~i~r~LkpGG~~viq 471 (525)
-+..++.+.++|+++|++++-
T Consensus 250 --~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 250 --SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp --CHHHHTTGGGGEEEEEEEEEC
T ss_pred --CHHHHHHHHHHHhcCCEEEEE
Confidence 235788889999999998763
No 465
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=21.46 E-value=1.1e+02 Score=31.98 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=28.5
Q ss_pred HHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecCh
Q 043102 78 FESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 78 ~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
++..||++..+....++.-+ + .++.|...+|++..+|.||+|+-.
T Consensus 236 l~~~GV~v~~~~~V~~i~~~----------~--~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVS----------S--GKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEE----------T--TEEEEEETTSCEEEESEEEECCCE
T ss_pred HHhcCCEEEeCCEEEEEEec----------C--CeEEEEECCCCEEECCEEEECCCC
Confidence 34447777666555444321 1 135667778888899999999753
No 466
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=21.27 E-value=1.1e+02 Score=31.37 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=31.9
Q ss_pred Ceehhhc------HHHHH-HhcC--CEEEEEcCChHHHHHHHHHHHH
Q 043102 399 REVIFLG------TIEVV-KRTG--CKYTGITLAEKQLKYAGIKVKE 436 (525)
Q Consensus 399 ~rVLDIG------a~~lA-~~~G--~~VtGIdlS~eql~~Ar~r~~~ 436 (525)
..|+||| ++.++ +..+ ++|++++.+++.++..+++++.
T Consensus 228 ~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 228 EKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4999999 66666 4333 7999999999999999999876
No 467
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.22 E-value=68 Score=30.34 Aligned_cols=32 Identities=13% Similarity=-0.007 Sum_probs=25.4
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcC
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEAD 438 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~g 438 (525)
|..+|++ |++|.-++.+++.++.+.+.+++.+
T Consensus 25 A~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~ 56 (256)
T 4fs3_A 25 AKVLDQL-GAKLVFTYRKERSRKELEKLLEQLN 56 (256)
T ss_dssp HHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGT
T ss_pred HHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC
Confidence 6777875 9999999999888888777776543
No 468
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=21.20 E-value=93 Score=33.23 Aligned_cols=23 Identities=9% Similarity=-0.120 Sum_probs=19.9
Q ss_pred cEEEEeCCCceEeCCEEEEecCh
Q 043102 112 SCTVVCGDGSREFYNSCVMALHA 134 (525)
Q Consensus 112 gv~v~~~~g~~e~fD~VV~A~ha 134 (525)
.+.|.+.+|.+..||.||+||=.
T Consensus 123 ~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 123 LWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp EEEEEETTTEEEEEEEEEECCCS
T ss_pred EEEEEECCCCEEEeCEEEECcCC
Confidence 57888889988899999999873
No 469
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=20.96 E-value=1e+02 Score=32.25 Aligned_cols=69 Identities=14% Similarity=0.172 Sum_probs=43.9
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHH------------HH---cC-CC--CC--------Cc---ccCcc-------
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKV------------KE---AD-LE--RN--------DR---SFGHE------- 449 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~------------~~---~g-l~--d~--------D~---~vg~~------- 449 (525)
|..+++. |.+|+++|.+++.++..++.. ++ .+ +. .. |. .|+..
T Consensus 18 A~~La~~-G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~ 96 (450)
T 3gg2_A 18 ATCFAEL-GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSA 96 (450)
T ss_dssp HHHHHHT-TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSB
T ss_pred HHHHHhc-CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCc
Confidence 6677764 999999999999887766521 00 11 11 00 22 44433
Q ss_pred ---cHHHHHHHHHhccCCCcEEEEEEecCC
Q 043102 450 ---YMEEFFGCCESLIAKDGLFVLQFISIP 476 (525)
Q Consensus 450 ---~~~~~f~~i~r~LkpGG~~viq~i~~~ 476 (525)
.....++.+...|++|-.++. ..+.+
T Consensus 97 dl~~v~~v~~~i~~~l~~g~iVV~-~STv~ 125 (450)
T 3gg2_A 97 DMSYVLDAARSIGRAMSRYILIVT-KSTVP 125 (450)
T ss_dssp CCHHHHHHHHHHHHHCCSCEEEEE-CSCCC
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEE-eeeCC
Confidence 678888999999988766554 33443
No 470
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=20.94 E-value=1.2e+02 Score=30.40 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=30.4
Q ss_pred HHHHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecC
Q 043102 74 MMELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALH 133 (525)
Q Consensus 74 ~~~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~h 133 (525)
+.+.+++.||++..+....++.- + + |...+|++..+|.||+|+.
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~-----------~---~--v~~~~g~~~~~D~vi~a~G 267 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIRE-----------H---E--IVDEKGNTIPADITILLPP 267 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECS-----------S---E--EEETTSCEEECSEEEEECC
T ss_pred HHHHHHHCCCEEEcCCceEEECC-----------C---e--EEECCCCEEeeeEEEECCC
Confidence 45566667888877666555511 1 2 5557788889999999975
No 471
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=20.72 E-value=65 Score=33.21 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=32.3
Q ss_pred CCCeEEeccCCCCCCchhhhchHHHHHhhhcCCccccC
Q 043102 237 RRGIWFRGAYQGYGFHEDGLKDLSINSCMTYGEECFFP 274 (525)
Q Consensus 237 ~~~~~fcGay~g~GfHEdg~~Sgl~aA~~llG~~~pfl 274 (525)
..+++.||+|..----|+++.++..++++++|.+..|.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 445 (453)
T 2bcg_G 408 KDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLK 445 (453)
T ss_dssp TTSEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCCC
T ss_pred CCCEEECCCCCccccHHHHHHHHHHHHHHHHCCccccc
Confidence 47899999998654339999999999999999987765
No 472
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.70 E-value=39 Score=29.35 Aligned_cols=48 Identities=25% Similarity=0.141 Sum_probs=38.4
Q ss_pred CCCCCCCCCC-CCceeEeeccCCCCCCCCCccccCCCCCCcceeeeeeccC
Q 043102 10 NDRTLPGCNR-SGFRVYQMMPKTDPASYPGRVIPGPQCPGTAWVRTERVFL 59 (525)
Q Consensus 10 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~r~f~ 59 (525)
|+.||--++- .|--|.--+-.+||..||=|-|-|-+ .+|-+|.-||=.
T Consensus 68 D~eTL~~~gIk~g~TIhLvi~s~~p~~~p~~~~~~~~--~~~~vitvrv~t 116 (118)
T 2daf_A 68 NNETLVQHGVKPQEIVQVEIFSTNPDLYPVRRIDGLT--DVSQIITVSGPS 116 (118)
T ss_dssp SSCCHHHHSCCSSCEEEEEEEESCTTTSCCCCCCSCC--CCCCCCCCCCCC
T ss_pred CcchHHHcCCCCCCEEEEEEecCCCccCcceeccCcc--cCCceEEEEEec
Confidence 4567766665 66777777888999999999998877 499999999854
No 473
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=20.45 E-value=18 Score=46.40 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=35.7
Q ss_pred eehhhc------HHHHHHhcC------CEEEEEcCChHHHHHHHHHHHHcCCCC-------------C--Cc----cc--
Q 043102 400 EVIFLG------TIEVVKRTG------CKYTGITLAEKQLKYAGIKVKEADLER-------------N--DR----SF-- 446 (525)
Q Consensus 400 rVLDIG------a~~lA~~~G------~~VtGIdlS~eql~~Ar~r~~~~gl~d-------------~--D~----~v-- 446 (525)
+||||| +..+.+..+ .+.|-.|+|....+.|+++.+...++. . |- .+
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~vl~ 1322 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCALA 1322 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC--
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccccc
Confidence 999998 222222111 378888999998888888876532211 1 33 11
Q ss_pred CcccHHHHHHHHHhccCCCcEEEEEEec
Q 043102 447 GHEYMEEFFGCCESLIAKDGLFVLQFIS 474 (525)
Q Consensus 447 g~~~~~~~f~~i~r~LkpGG~~viq~i~ 474 (525)
..++....++.+.++|||||.+++..++
T Consensus 1323 ~t~~~~~~l~~~~~lL~p~G~l~~~e~~ 1350 (2512)
T 2vz8_A 1323 TLGDPAVAVGNMAATLKEGGFLLLHTLL 1350 (2512)
T ss_dssp ------------------CCEEEEEEC-
T ss_pred ccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 1246678899999999999999998754
No 474
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=20.44 E-value=2e+02 Score=26.97 Aligned_cols=61 Identities=7% Similarity=0.003 Sum_probs=41.0
Q ss_pred HHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCC-----------CCc---ccCcccHHHHHHHHHhccCCCcEEEEE
Q 043102 406 TIEVVKRTGCKYTGITLAEKQLKYAGIKVKEADLER-----------NDR---SFGHEYMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 406 a~~lA~~~G~~VtGIdlS~eql~~Ar~r~~~~gl~d-----------~D~---~vg~~~~~~~f~~i~r~LkpGG~~viq 471 (525)
+..+++ .|.+|+++|.+++.++.+++ .|+.+ .|. ++........++++...|+||..+ +.
T Consensus 16 a~~l~~-~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~D~vi~av~~~~~~~~~~~l~~~~~~~~~v-v~ 89 (279)
T 2f1k_A 16 AGDLRR-RGHYLIGVSRQQSTCEKAVE----RQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTLEKLIPHLSPTAIV-TD 89 (279)
T ss_dssp HHHHHH-TTCEEEEECSCHHHHHHHHH----TTSCSEEESCGGGGTTCSEEEECSCHHHHHHHHHHHGGGSCTTCEE-EE
T ss_pred HHHHHH-CCCEEEEEECCHHHHHHHHh----CCCCccccCCHHHhCCCCEEEEECCHHHHHHHHHHHHhhCCCCCEE-EE
Confidence 444554 48899999999988776643 23321 144 556666778888888889887755 44
Q ss_pred E
Q 043102 472 F 472 (525)
Q Consensus 472 ~ 472 (525)
.
T Consensus 90 ~ 90 (279)
T 2f1k_A 90 V 90 (279)
T ss_dssp C
T ss_pred C
Confidence 3
No 475
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=20.13 E-value=41 Score=32.85 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=18.8
Q ss_pred cHHHHHHHHHhccCCCcEEEEE
Q 043102 450 YMEEFFGCCESLIAKDGLFVLQ 471 (525)
Q Consensus 450 ~~~~~f~~i~r~LkpGG~~viq 471 (525)
.+...++++.++|||||.+++.
T Consensus 75 ~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 75 ELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEE
Confidence 3567889999999999999874
No 476
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=20.00 E-value=1.3e+02 Score=32.44 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=30.9
Q ss_pred HHHHHhccceeeeccEEEEEecCCCceeeCccCCcccEEEEeCCCceEeCCEEEEecChH
Q 043102 76 ELFESLGVDMEISDMSFSLSLDKGQGCEWGSRNGLSSCTVVCGDGSREFYNSCVMALHAP 135 (525)
Q Consensus 76 ~~~~~~gv~~~~~~~~~~v~~~~~~~~e~~s~~~~~gv~v~~~~g~~e~fD~VV~A~had 135 (525)
+..+..|+++.......++..+.+ +.+.|.+.+|.+..+|.||+|+=+.
T Consensus 228 ~~l~~~Gv~I~~~t~V~~I~~~~~-----------~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 228 ATIIELGGEIRFSTRVDDLHMEDG-----------QITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp HHHHHTTCEEESSCCEEEEEESSS-----------BEEEEEETTSCEEECSCEEECCCTT
T ss_pred HHHHhcCCEEEeCCEEEEEEEeCC-----------EEEEEEECCCCEEECCEEEECCCCC
Confidence 333445777766666666544221 1233666788788999999998554
Done!