Query 043104
Match_columns 570
No_of_seqs 364 out of 2312
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 22:46:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 4.9E-98 2E-102 819.9 48.2 501 37-540 2-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 1.2E-94 4.1E-99 790.8 46.8 487 41-538 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 3.1E-88 1E-92 744.4 42.4 488 37-540 6-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.3E-78 4.3E-83 662.3 36.6 454 41-538 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2.3E-76 7.8E-81 647.7 42.5 450 56-537 7-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.2E-70 7.4E-75 604.3 40.5 455 43-537 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 2.4E-69 8.2E-74 596.0 44.0 457 41-538 20-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 3.8E-69 1.3E-73 595.0 43.6 466 41-538 16-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 1.3E-68 4.5E-73 588.0 39.5 456 39-539 6-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.3E-66 8E-71 564.7 34.5 436 58-537 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2E-40 6.8E-45 367.0 36.7 226 38-281 30-266 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 1.5E-32 5.1E-37 303.0 36.0 200 81-285 53-263 (524)
13 4feh_A Oxidoreductase DPRE1; a 100.0 6.1E-32 2.1E-36 294.6 32.1 199 81-286 35-238 (481)
14 4bby_A Alkyldihydroxyacetoneph 100.0 1.2E-32 4E-37 311.4 22.9 203 82-285 198-409 (658)
15 2vfr_A Xylitol oxidase, aldito 100.0 1.2E-30 4.2E-35 280.7 32.2 175 81-266 12-189 (422)
16 3pm9_A Putative oxidoreductase 100.0 1.1E-31 3.8E-36 292.3 21.1 204 81-286 43-253 (476)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 7.6E-31 2.6E-35 292.1 21.7 198 86-286 134-340 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 7.4E-30 2.5E-34 281.5 23.4 198 87-288 54-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 1.8E-29 6E-34 280.4 15.2 197 58-265 9-226 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 5.8E-28 2E-32 268.4 23.9 201 86-288 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 3.4E-28 1.2E-32 265.8 17.7 178 81-263 21-220 (540)
22 1f0x_A DLDH, D-lactate dehydro 99.9 7.8E-28 2.7E-32 266.4 15.4 195 86-285 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.7E-24 5.9E-29 223.9 13.2 164 86-262 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.7E-24 9.4E-29 224.8 12.5 165 86-262 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.6E-23 5.6E-28 217.5 12.9 160 86-260 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 1E-22 3.5E-27 212.2 16.4 164 87-262 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 1.3E-21 4.3E-26 197.3 9.5 151 89-261 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 4E-19 1.4E-23 174.1 10.7 115 147-269 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 97.9 1.9E-05 6.5E-10 80.1 7.8 156 89-261 4-178 (287)
30 1n62_C Carbon monoxide dehydro 97.2 0.00042 1.4E-08 70.2 6.5 155 89-260 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 96.8 0.0015 5.1E-08 70.4 7.0 152 92-259 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 92.8 0.13 4.5E-06 51.7 6.0 153 88-258 3-174 (288)
33 3hrd_C Nicotinate dehydrogenas 91.8 0.18 6E-06 51.0 5.7 75 90-169 3-82 (296)
34 3nvz_B Xanthine dehydrogenase/ 91.7 0.16 5.3E-06 51.6 5.2 157 89-259 9-190 (305)
35 1rm6_B 4-hydroxybenzoyl-COA re 85.2 0.79 2.7E-05 46.8 5.0 76 89-170 5-84 (324)
36 1wvf_A 4-cresol dehydrogenase 80.7 2.2 7.4E-05 46.3 6.6 33 504-536 481-514 (520)
37 4bby_A Alkyldihydroxyacetoneph 65.5 2.3 7.9E-05 47.5 2.1 29 503-531 625-654 (658)
38 3unc_A Xanthine dehydrogenase/ 65.4 4.5 0.00015 48.9 4.6 78 89-172 232-313 (1332)
39 1e8g_A Vanillyl-alcohol oxidas 44.6 13 0.00046 40.4 3.7 26 511-536 523-548 (560)
40 1f0x_A DLDH, D-lactate dehydro 37.9 18 0.00061 39.6 3.4 27 516-542 541-567 (571)
41 1xty_A PTH, peptidyl-tRNA hydr 37.7 39 0.0013 28.9 4.9 42 81-124 48-90 (120)
42 2i0k_A Oxidoreductase; MIX alp 35.1 15 0.00051 40.1 2.1 23 511-533 533-555 (561)
43 3pm9_A Putative oxidoreductase 31.7 18 0.00061 38.6 2.0 29 503-531 443-472 (476)
44 1wn2_A Peptidyl-tRNA hydrolase 27.3 90 0.0031 26.7 5.4 38 87-124 53-91 (121)
45 3zyv_A AOH1; oxidoreductase, m 27.0 31 0.0011 41.7 3.2 76 92-173 242-321 (1335)
46 1rzw_A Protein AF2095(GR4); be 26.2 71 0.0024 27.5 4.5 42 81-124 42-84 (123)
47 1rlk_A Hypothetical protein TA 25.2 91 0.0031 26.4 5.0 38 87-124 49-87 (117)
48 2zv3_A PTH, peptidyl-tRNA hydr 24.9 96 0.0033 26.2 5.1 38 87-124 47-85 (115)
49 3js8_A Cholesterol oxidase; ch 23.1 28 0.00094 37.9 1.6 23 510-532 511-533 (540)
50 2crl_A Copper chaperone for su 21.1 1.6E+02 0.0055 23.4 5.6 32 146-177 48-79 (98)
51 1q7s_A BIT1, protein CGI-147; 20.7 1.4E+02 0.0047 25.3 5.3 41 81-123 45-86 (117)
52 3fbi_A Mediator of RNA polymer 20.2 32 0.0011 27.7 1.0 17 507-523 22-39 (84)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.9e-98 Score=819.89 Aligned_cols=501 Identities=47% Similarity=0.868 Sum_probs=442.2
Q ss_pred CcccCHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeE
Q 043104 37 SAYESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQL 116 (570)
Q Consensus 37 ~~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~ 116 (570)
.+.++|++||+.++.++. .+++.|++|+|+.|++++.++++|.||+....++|.+||+|+|++||+++|++|+++++|+
T Consensus 2 ~~~~~f~~c~~~~~~~~~-~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v 80 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNV-ANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQI 80 (518)
T ss_dssp CHHHHHHHHHHHHCCC-----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEE
T ss_pred ChhHHHHHHHHhcCCccC-CCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcE
Confidence 467789999998876665 7889999999999999998999999999988999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceecccccc
Q 043104 117 KIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSG 196 (570)
Q Consensus 117 ~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~g 196 (570)
++|||||++.|.+.....++++|||++|++|++|+++++|+||||+++++|++++.++|.++++++|.|++|||||+++|
T Consensus 81 ~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 81 RTRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp EEESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred EEECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 99999999998875332359999999999999999999999999999999999999998789999999999999999999
Q ss_pred CccCCCcccccchhhceeEEEEEccCceEeeccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecch-h
Q 043104 197 GGYGNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-E 275 (570)
Q Consensus 197 Gg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~-~ 275 (570)
||+|+++++||+++|+|++++||++||++++.+.+++|||||+||||+|+|||||+++|||+|.|+.++.|.+.++++ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999854568999999999867899999999999999999888888887765 5
Q ss_pred hHHHHHHHHHHhcccCCccceEEEEEeecc----C-CCCCeEEEEEEEEEecCcchhhhhhhccCccCCCcccceeeecH
Q 043104 276 NATDVVYKWQLVAPATDDNLFMRMLLQPVT----R-NKKPTVRASIVALYLGGADSLVTLLAKDFPELGLKKENVMEMSW 350 (570)
Q Consensus 276 ~a~~~~~~~~~~~~~~p~~l~~~~~~~~~~----~-~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg~~~~~~~~~~~ 350 (570)
++.+++.+||++++++|+++++++.+...+ . .++.++.+.+.++|+|+.+++.++|.+.|++++....+|.+|+|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 578999999999999999999998877532 1 12234567889999999999999999888999988889999999
Q ss_pred HHHHHHHhhcCCC-CC---ccccccCCCCCccccccccccccCCCCHHHHHHHHHHHHHc--CceEEEEeecCCccccCC
Q 043104 351 IQSVLWWANFDNG-TS---PNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMMEL--GKIGLVFNPYGGKMAEIP 424 (570)
Q Consensus 351 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~GG~~~~v~ 424 (570)
++++.++++++.+ .+ ++.++++......|||.||+|+++++++++|+.+++.+.+. +.+.+.+++|||+|++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 9999998766543 34 56666665545567899999999999999999999988763 357899999999999999
Q ss_pred CCCCCCCccCCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccC-CCCCCCCccccchh
Q 043104 425 ASETAFPHRAGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIG-INHHGEDSYAEGKV 503 (570)
Q Consensus 425 ~~~taf~hR~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg-~~~~~~~~~~~~~~ 503 (570)
+++||||||++++|.+++.+.|.++ +.++++++|+++++++|.||++++++++|+||+|.|++ .+...+++|++++.
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 9999999999779999999999765 44578899999999999999887889999999999987 54345678889999
Q ss_pred hhhhhccccHHHHHHhhhhcCcCCcccCCCCCCCCCC
Q 043104 504 YGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPTQPR 540 (570)
Q Consensus 504 ~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~~~~ 540 (570)
|+++|||+||+||++||+||||+|||+++|||||+++
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 9999999999999999999999999999999999865
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.2e-94 Score=790.80 Aligned_cols=487 Identities=39% Similarity=0.735 Sum_probs=433.5
Q ss_pred CHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 043104 41 SFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRS 120 (570)
Q Consensus 41 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrg 120 (570)
+|++||+.++.++ ++.|++|+|++|+++++++++|.||+....++|.+|++|+|++||+++|++|+++++|+++||
T Consensus 1 ~~~~cl~~~~~~~----~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrG 76 (495)
T 3fw9_A 1 DLLSCLTFNGVRN----HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRS 76 (495)
T ss_dssp CHHHHHHHTTCCC----EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEES
T ss_pred ChhHHHhhcCCCC----CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 5999999875432 689999999999999888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCccC
Q 043104 121 GGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYG 200 (570)
Q Consensus 121 gGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G 200 (570)
||||+.|.+...+.++++|||++|++|++|+++++|+||||+++++|++++.++|.++++|+|.|+++||||+++|||+|
T Consensus 77 gGh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G 156 (495)
T 3fw9_A 77 GGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFG 156 (495)
T ss_dssp SCCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCc
Confidence 99999998876544699999999999999999999999999999999999999976699999999999999999999999
Q ss_pred CCcccccchhhceeEEEEEccCceEeeccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecch-hhHHH
Q 043104 201 NMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-ENATD 279 (570)
Q Consensus 201 ~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~-~~a~~ 279 (570)
+++++||+.+|+|++++||++||++++++.+++|||||+||||+|+|||||+++|||+|+|+.+..+.+.++.+ +++.+
T Consensus 157 ~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~ 236 (495)
T 3fw9_A 157 MMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATS 236 (495)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHH
T ss_pred ccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHH
Confidence 99999999999999999999999999855578999999999667899999999999999999888888888764 55889
Q ss_pred HHHHHHHhcccCCccceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCccCCCcccceeeecHHHHHHHHhh
Q 043104 280 VVYKWQLVAPATDDNLFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPELGLKKENVMEMSWIQSVLWWAN 359 (570)
Q Consensus 280 ~~~~~~~~~~~~p~~l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg~~~~~~~~~~~~~~~~~~~~ 359 (570)
++.+||++++++|+++++.+..... ..++.+.+.++|+|+.+++.+.|.+.|+++++...+|.+|+|++++.++++
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 312 (495)
T 3fw9_A 237 LLHKWQFVAEELEEDFTLSVLGGAD----EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAG 312 (495)
T ss_dssp HHHHHHHHHHHSCTTEEEEEEEEEE----TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTT
T ss_pred HHHHHHHHHhcCChhHeEEEEEcCC----CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhc
Confidence 9999999999999999998875421 233467888999999999999898888999888889999999999988875
Q ss_pred cCCCCCccccccCCCC-CccccccccccccCCCCHHHHHHHHHHHHHcCceEEEEeecCCccccCCCCCCCCCccCCceE
Q 043104 360 FDNGTSPNVLLDRDLN-SADFLKRKSDYVQKPIPKYSLNLLWKQMMELGKIGLVFNPYGGKMAEIPASETAFPHRAGNLF 438 (570)
Q Consensus 360 ~~~~~~~~~~~~~~~~-~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~GG~~~~v~~~~taf~hR~~~~~ 438 (570)
++. ++.++++... ...+||.||+|+++++++++++.+++.+.+.+...+.+++|||+|+++++++|||+||++++|
T Consensus 313 ~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~ 389 (495)
T 3fw9_A 313 LET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRL 389 (495)
T ss_dssp CSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCE
T ss_pred ccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCccce
Confidence 432 3445555433 346789999999999999999999999887777789999999999999999999999997789
Q ss_pred EEEEEEEeCCCCchHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccCCCCC-----CCCccccchhhhhhhccccH
Q 043104 439 KIQYSISWSDPGTEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIGINHH-----GEDSYAEGKVYGEKYFNGNF 513 (570)
Q Consensus 439 ~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg~~~~-----~~~~~~~~~~~g~~Yfg~N~ 513 (570)
.+++.+.|.+++++.++++++|+++++++|+||++++++++|+||+|.|++.+.. ++++|++++.|+++|||+||
T Consensus 390 ~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~ 469 (495)
T 3fw9_A 390 MVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNY 469 (495)
T ss_dssp EEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGH
T ss_pred EEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHH
Confidence 9999999976533556789999999999999998877889999999999874322 24677888899999999999
Q ss_pred HHHHHhhhhcCcCCcccCCCCCCCC
Q 043104 514 DRLVKVKTMVDPENFFRNEQSIPTQ 538 (570)
Q Consensus 514 ~RL~~IK~kyDP~n~F~~~qsI~~~ 538 (570)
+||++||+||||+|+|+++|||||+
T Consensus 470 ~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 470 ERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999986
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.1e-88 Score=744.37 Aligned_cols=488 Identities=45% Similarity=0.856 Sum_probs=424.3
Q ss_pred CcccCHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeE
Q 043104 37 SAYESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQL 116 (570)
Q Consensus 37 ~~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~ 116 (570)
+..++|++||.... ++..|++|+++.|.+++.++++|.||+....++|.+||+|+|++||+++|++|+++++||
T Consensus 6 ~~~~~f~~~L~~~~------~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 6 AAKEDFLGCLVKEI------PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp ---CHHHHHHHHHS------CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHhhC------CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 45678999998753 356899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCccC--CCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceecccc
Q 043104 117 KIRSGGHDYEGLSYIS--DRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHL 194 (570)
Q Consensus 117 ~vrggGh~~~g~s~~~--~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~ 194 (570)
+||||||++.|.+... .+++++|||++||+|++|+++++|+||||++++||+++|.++|..+++++|.|++||+||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 9999999999887643 13599999999999999999999999999999999999999998889999999999999999
Q ss_pred ccCccCCCcccccchhhceeEEEEEccCceEeeccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecch
Q 043104 195 SGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA 274 (570)
Q Consensus 195 ~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~ 274 (570)
+|||+|+++++||+++|||+++|||++||++++++.+++|||||+||||||+|||||++++|++|+|+.++.+...++..
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 99999999999999999999999999999999866678999999999888999999999999999999888888888777
Q ss_pred hhHHHHHHHHHHhcccCCccceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCccCCCcccceeeecHHHHH
Q 043104 275 ENATDVVYKWQLVAPATDDNLFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPELGLKKENVMEMSWIQSV 354 (570)
Q Consensus 275 ~~a~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg~~~~~~~~~~~~~~~ 354 (570)
+.+.+++.+|+.+++++|+++...+..... ...+.++|+|+.+++.+.+.+.|++++.....+.+++|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQGP--------KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSI 311 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEESSS--------EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHH
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEecCC--------CcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccc
Confidence 778899999999999999999887765422 456778999999888888888889999888899999999988
Q ss_pred HHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHHHcC-ceEEEEeecCCccccCCCCCCCCCcc
Q 043104 355 LWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMMELG-KIGLVFNPYGGKMAEIPASETAFPHR 433 (570)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~GG~~~~v~~~~taf~hR 433 (570)
.+..........+.++++......+.+.+++++.++++++.++.+++.+...+ ...++++++||+|+++++++|+|+||
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R 391 (500)
T 3tsh_A 312 PFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHR 391 (500)
T ss_dssp HHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCC
T ss_pred hhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCccc
Confidence 76653222222233334444444556778888888899998888887665433 46778999999999999999999999
Q ss_pred CCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccCCCCC--CCCccccchhhhhhhccc
Q 043104 434 AGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIGINHH--GEDSYAEGKVYGEKYFNG 511 (570)
Q Consensus 434 ~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg~~~~--~~~~~~~~~~~g~~Yfg~ 511 (570)
++.+|.+++...|.++++ +++..+|++++++.|+|++++.++++|+||+|.|++.++. ....|..++.|+++|||+
T Consensus 392 ~~~l~~i~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 392 KGVLFNIQYVNYWFAPGA--AAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp TTCCEEEEEEEEECSTTC--CHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEEEecCCcch--hHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 988899999999988753 3678899999999999998888899999999999986543 224566778999999999
Q ss_pred cHHHHHHhhhhcCcCCcccCCCCCCCCCC
Q 043104 512 NFDRLVKVKTMVDPENFFRNEQSIPTQPR 540 (570)
Q Consensus 512 N~~RL~~IK~kyDP~n~F~~~qsI~~~~~ 540 (570)
||+||++||+||||+|+|+++|||||+.+
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 99999999999999999999999999853
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.3e-78 Score=662.32 Aligned_cols=454 Identities=24% Similarity=0.404 Sum_probs=374.9
Q ss_pred CHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 043104 41 SFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRS 120 (570)
Q Consensus 41 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrg 120 (570)
++.+||+.. ...+++|+|+.|+..+. +|+....++|.+||+|+|++||+++|++|+++++|+++||
T Consensus 2 ~l~~cl~~~--------~~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~g 67 (473)
T 3rja_A 2 AIEACLSAA--------GVPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKS 67 (473)
T ss_dssp HHHHHHHHT--------TCCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred hHHHHHHhC--------CCcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 478999864 34689999999998743 4666667899999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCeEEEEccCCccEE-EeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCcc
Q 043104 121 GGHDYEGLSYISDRPFFILDMFNLRSID-VDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGY 199 (570)
Q Consensus 121 gGh~~~g~s~~~~~~gvvIdl~~l~~i~-vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~ 199 (570)
||||+.+.+....+++++|||++|++|. +|+++++|+||+|+++++|++++.++| .+.+|.|.|+++||||+++|||+
T Consensus 68 gGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 68 GGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp SCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 9999987655433358999999999996 999999999999999999999999988 47889999999999999999999
Q ss_pred CCCcccccchhhceeEEEEEccCceEee-ccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecch-h-h
Q 043104 200 GNMLRKFGLSTDNVVDAKIVDVRGRILD-RKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-E-N 276 (570)
Q Consensus 200 G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~-~-~ 276 (570)
|+.+++||+.+|+|++++||++||++++ ++.+++|||||+||| +|+|||||+++|||+|+|+.++.+.+.++++ + +
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999998 667799999999999 5799999999999999998888888888765 3 3
Q ss_pred HHHHHHHHHHhcc-cCCccceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCccCC-Cccccee-eecHHHH
Q 043104 277 ATDVVYKWQLVAP-ATDDNLFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPELG-LKKENVM-EMSWIQS 353 (570)
Q Consensus 277 a~~~~~~~~~~~~-~~p~~l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg-~~~~~~~-~~~~~~~ 353 (570)
+.+++++||++.. ++|+++++.+.+. . .. .+.+.++|+|+.+++++++++.+...+ +...++. +|+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~-~---~~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~ 298 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDY-G---AG---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIES 298 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEES-S---SS---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEc-C---CC---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHH
Confidence 7799999999988 8999999988876 2 11 256778999999988887775322222 3567788 9999998
Q ss_pred HHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHHHcC------ceEEEEeecCC---ccccCC
Q 043104 354 VLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMMELG------KIGLVFNPYGG---KMAEIP 424 (570)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~~GG---~~~~v~ 424 (570)
+.++++. .+.+.... .. ...++.||.+.. ++++++++.+++.+.+.. ...+++++||| ++++++
T Consensus 299 ~~~~~~~---~~~~~~~~--~~-~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~ 371 (473)
T 3rja_A 299 VLSYSNF---DHVDFITP--QP-VENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVT 371 (473)
T ss_dssp HHHTSSS---SCCCCSSC--CC-CBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSC
T ss_pred HHhhhcC---CCcccccC--CC-CCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCC
Confidence 8776531 11121111 01 345678898864 799999999999886521 13578999998 678899
Q ss_pred CCCCCCCccCCceEEEEEEEEeCC-CCchHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccCCCCCCCCccccchh
Q 043104 425 ASETAFPHRAGNLFKIQYSISWSD-PGTEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIGINHHGEDSYAEGKV 503 (570)
Q Consensus 425 ~~~taf~hR~~~~~~i~~~~~W~~-~~~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg~~~~~~~~~~~~~~ 503 (570)
+++||||||+ .+|.+++.+.|.+ +. .+++..+|++++++.+.+.....++++|+||+|.|++ ...
T Consensus 372 ~~~TAf~hR~-~~~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~ 437 (473)
T 3rja_A 372 NAETAYPHRD-KLWLIQFYDRYDNNQT--YPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDY 437 (473)
T ss_dssp TTTSSCCCTT-CSEEEEEEEEECTTSC--CCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHH
T ss_pred CCCCccccCC-ccEEEEEEEEeCCCCc--cchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chh
Confidence 9999999999 6899999999964 22 1234567777777766555443456899999998864 136
Q ss_pred hhhhhccccHHHHHHhhhhcCcCCcccCCCCCCCC
Q 043104 504 YGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPTQ 538 (570)
Q Consensus 504 ~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~~ 538 (570)
|+++|||+||+||++||+||||+|+|+++|||||.
T Consensus 438 ~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 438 ATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 99999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.3e-76 Score=647.69 Aligned_cols=450 Identities=23% Similarity=0.355 Sum_probs=359.8
Q ss_pred CccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCC
Q 043104 56 QISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRP 135 (570)
Q Consensus 56 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~ 135 (570)
++++.+++|+|+.|+++++ . |+.+..++|.+||+|+|++||+++|++|+++++|+++|||||++.+.+...+ +
T Consensus 7 s~~~~~~~p~~~~y~~~~~--~----~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~ 79 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSH--S----DNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-R 79 (501)
T ss_dssp --CCEEEETTSTTHHHHTC--C----SCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-C
T ss_pred cCCCceECCCCcchHHHHH--H----HhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-C
Confidence 5678899999999998763 3 4444467999999999999999999999999999999999999998876542 4
Q ss_pred eEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHh-cCCcCeecCCCCCcceeccccccCccCCCcccccchhhcee
Q 043104 136 FFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQ-KSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVV 214 (570)
Q Consensus 136 gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~ 214 (570)
+++|||++|++|++|+++++|+||+|+++++|++++.+ +| +++|.|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 80 gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~ 157 (501)
T 3pop_A 80 DLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLH 157 (501)
T ss_dssp SEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEE
T ss_pred EEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEE
Confidence 89999999999999999999999999999999999974 56 7889999999999999999999999999999999999
Q ss_pred EEEEEc--cCce--Eeec----cCCCchhhHHhhccCCCceEEEEeeEEee----------eec-CceEEEEEEEecchh
Q 043104 215 DAKIVD--VRGR--ILDR----KAMGEDLFWAIRGGGGASFGVVLAYKIKL----------VPV-PETVTVFRAERLLAE 275 (570)
Q Consensus 215 ~~~vV~--a~G~--iv~~----~~~~~DLfwa~rGgggg~fGVVt~~t~kl----------~p~-p~~~~~~~~~~~~~~ 275 (570)
++|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|. |..++.+.+.|+.++
T Consensus 158 ~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~ 237 (501)
T 3pop_A 158 AVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAM 237 (501)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhh
Confidence 999999 8999 4542 35789999999999778999999999998 664 446777777776542
Q ss_pred ----hHHHHHHHHHHhcc--cCCccc----eEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCcc------CC
Q 043104 276 ----NATDVVYKWQLVAP--ATDDNL----FMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPE------LG 339 (570)
Q Consensus 276 ----~a~~~~~~~~~~~~--~~p~~l----~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~------lg 339 (570)
...++++.|+++.. ..|+++ +..+.+... ... .+.+..+|.|+.+++.+++++.+.. +.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~ 312 (501)
T 3pop_A 238 IDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV---SSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGVV 312 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG---GGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCC
T ss_pred cCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC---CCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCCC
Confidence 23578888888764 456553 333333221 111 2455677899887766555543321 23
Q ss_pred CcccceeeecHHHHHHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHHHc---CceEEEEeec
Q 043104 340 LKKENVMEMSWIQSVLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMMEL---GKIGLVFNPY 416 (570)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~ 416 (570)
+... +.+|+|++...++. .+.+. +....++|.|+.|++++++++.++.+++.+.+. +.+.+++++|
T Consensus 313 p~~~-~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 381 (501)
T 3pop_A 313 GIPR-GGVMSWLTGTRYMS-QADCG---------DVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSY 381 (501)
T ss_dssp CEEE-EEEEEHHHHHHHTC-BCSCG---------GGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEEC
T ss_pred ccce-eEEeCHHHHHhhhc-CCCCC---------cccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 3334 89999999776542 21110 001235788999999889999999999988652 2467899999
Q ss_pred CCccccCCCCCCCCCccCCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhcCcc------cCCCCcccccCCCCccCC
Q 043104 417 GGKMAEIPASETAFPHRAGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMTPFV------SKSPRSAYLNYRDVDIGI 490 (570)
Q Consensus 417 GG~~~~v~~~~taf~hR~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~p~~------~~~~~~~YvNy~d~dlg~ 490 (570)
||+|+++++++|||+||+ .+|++++...|.++ +.++++.+|++++++.|.++. ++.++++|+||+|.|++.
T Consensus 382 GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~ 458 (501)
T 3pop_A 382 GGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLD 458 (501)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGC
T ss_pred CcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccc
Confidence 999999999999999999 68999999999765 455788999999999997543 344679999999999864
Q ss_pred CCCCCCccccchhhhhhhccccHHHHHHhhhhcCcCCcccCCCCCCC
Q 043104 491 NHHGEDSYAEGKVYGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPT 537 (570)
Q Consensus 491 ~~~~~~~~~~~~~~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~ 537 (570)
++. + ..+..|+++|||+||+||++||+||||+|+|+++|||||
T Consensus 459 ~~~-~---~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 459 PAR-N---RSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TTT-C---CSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccc-c---cccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 321 1 125569999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.2e-70 Score=604.30 Aligned_cols=455 Identities=26% Similarity=0.417 Sum_probs=351.0
Q ss_pred HHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCC
Q 043104 43 LQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGG 122 (570)
Q Consensus 43 ~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggG 122 (570)
..||... ...+++|+|+.|++.+ +..+|.|| ...|.+||+|+|++||+++|++|+++++||+|||||
T Consensus 24 ~~~l~~~--------~~~v~~p~d~~Y~~~~-~~~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 24 ERCLPPA--------GPVKVTPDDPRYLNLK-LRGANSRF----NGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp --CCCCC--------CCEEECTTSTTHHHHH-TCSSCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred hhhcccC--------CCeEECCCCcchHHHH-hhhhhhcc----cCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 4888753 5689999999999886 23457777 468999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHh-cCCcCeecCCCCCcceeccccccCccCC
Q 043104 123 HDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQ-KSKLHGYPAGVCPTVGVGGHLSGGGYGN 201 (570)
Q Consensus 123 h~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~gGg~G~ 201 (570)
|++.+.+...+ ++++|||++|++|++|+++++|+||+|+++++|++++.+ +| +.+++|.|++|||||+++|||+|+
T Consensus 91 h~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~ 167 (523)
T 2wdx_A 91 HCFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGP 167 (523)
T ss_dssp CCSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCT
T ss_pred CCCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCc
Confidence 99998776532 489999999999999999999999999999999999984 77 788999999999999999999999
Q ss_pred CcccccchhhceeEEEEEccC--ceEee---ccC-CCch--hhHHhhccCCCceEEEEeeEEee-----------eecCc
Q 043104 202 MLRKFGLSTDNVVDAKIVDVR--GRILD---RKA-MGED--LFWAIRGGGGASFGVVLAYKIKL-----------VPVPE 262 (570)
Q Consensus 202 ~~~~~G~~~D~v~~~~vV~a~--G~iv~---~~~-~~~D--Lfwa~rGgggg~fGVVt~~t~kl-----------~p~p~ 262 (570)
++++||+++|+|+++|||++| |+++. +.. +++| ||||+||||+|+|||||+++||+ +|.|+
T Consensus 168 ~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 168 LSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 999999999999999999955 99743 322 4555 99999988778999999999999 99876
Q ss_pred -eEEEEEEEecchh----hHHHHHHHHHHhccc--CCccc----eEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhh
Q 043104 263 -TVTVFRAERLLAE----NATDVVYKWQLVAPA--TDDNL----FMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLL 331 (570)
Q Consensus 263 -~~~~~~~~~~~~~----~a~~~~~~~~~~~~~--~p~~l----~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~ 331 (570)
.+..+.+.|+.+. ...+++++|+++... .|++. ...+.+... ..+...+.+.+..+|.|+.++..+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~l 326 (523)
T 2wdx_A 248 ATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARRLL 326 (523)
T ss_dssp SEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHHHH
T ss_pred ccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHHHH
Confidence 4666777776532 235788888887643 56652 333323221 11211113455678899876655555
Q ss_pred hcc---Ccc-CC-CcccceeeecHHHHHHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHHHc
Q 043104 332 AKD---FPE-LG-LKKENVMEMSWIQSVLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMMEL 406 (570)
Q Consensus 332 ~~~---f~~-lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~~~ 406 (570)
.+. +.+ ++ +....+.+++|.+....+ ... ..+++.++.|+.++++++.++.+++.+.+.
T Consensus 327 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 390 (523)
T 2wdx_A 327 DAHIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GGR---GPASKTKAGYLRKRLTDRQIQAVYENMTHM 390 (523)
T ss_dssp HHHHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CSS---CCEEEEEEEEESSCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhcCCCccccceeccHHHHHHhh-------------cCC---CCceeeecccccCCCCHHHHHHHHHHHHhc
Confidence 432 222 23 334556677876521110 000 114566788887779999999999888643
Q ss_pred ---CceEEEEeecCCccccCCCCCCCCCccCCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhc------CcccCCCC
Q 043104 407 ---GKIGLVFNPYGGKMAEIPASETAFPHRAGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMT------PFVSKSPR 477 (570)
Q Consensus 407 ---~~~~~~~~~~GG~~~~v~~~~taf~hR~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~------p~~~~~~~ 477 (570)
+.+.+.++++||++++++.++|+|+||+ .+|++++...|.++ +.++.+.+|++++++.|. |+.+....
T Consensus 391 ~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~ 467 (523)
T 2wdx_A 391 DGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVSD 467 (523)
T ss_dssp TTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBC
T ss_pred CCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCC
Confidence 2356789999999999999999999999 68999999999875 345788999999999987 43222246
Q ss_pred cccccCCCCccCCCCCCCCccccchhhhhhhccccHHHHHHhhhhcCcCCcccCCCCCCC
Q 043104 478 SAYLNYRDVDIGINHHGEDSYAEGKVYGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPT 537 (570)
Q Consensus 478 ~~YvNy~d~dlg~~~~~~~~~~~~~~~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~ 537 (570)
++|+||+|.+++.++ .++++ ..|++.|||+||+||++||+||||+|+|+++|||||
T Consensus 468 g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 468 GAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 799999999865211 11222 249999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.4e-69 Score=596.02 Aligned_cols=457 Identities=26% Similarity=0.417 Sum_probs=347.8
Q ss_pred CHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 043104 41 SFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRS 120 (570)
Q Consensus 41 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrg 120 (570)
|...|++.. ...|++|+|+.|++++ +..+|.|| ...|.+||+|+|++||+++|++|+++++|++|||
T Consensus 20 ~~~~~~~~~--------~~~v~~p~d~~Y~~~~-~~~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 20 DGGACGART--------ALVKVDRVDRRYQDLV-TRGFNGRF----RGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------------CCCEEESSSTTHHHHH-TCCSCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred cccccccCC--------CCeEECCCCcchHHHH-hccccccc----cCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 556787742 5679999999999886 23456666 5689999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHH-hcCCcCeecCCCCCcceeccccccCcc
Q 043104 121 GGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIW-QKSKLHGYPAGVCPTVGVGGHLSGGGY 199 (570)
Q Consensus 121 gGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~-~~g~~l~~~~G~~~~vgvgG~~~gGg~ 199 (570)
|||++.+.+...+ ++++|||++|++|++|+++++|+||+|+++++|++++. ++| +.+|+|.|++|||||+++|||+
T Consensus 87 gGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 87 GGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp SCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCC
T ss_pred CCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCC
Confidence 9999998765432 48999999999999999999999999999999999997 677 7889999999999999999999
Q ss_pred CCCcccccchhhceeEEEEEccC--ceEee---ccC-CCc--hhhHHhhccCCCceEEEEeeEEee-----------eec
Q 043104 200 GNMLRKFGLSTDNVVDAKIVDVR--GRILD---RKA-MGE--DLFWAIRGGGGASFGVVLAYKIKL-----------VPV 260 (570)
Q Consensus 200 G~~~~~~G~~~D~v~~~~vV~a~--G~iv~---~~~-~~~--DLfwa~rGgggg~fGVVt~~t~kl-----------~p~ 260 (570)
|+++++||+++|+|+++|||++| |+++. +.. +++ |||||+||||+|+|||||+++||+ +|.
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred CccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999977 98643 222 445 599999998678999999999999 998
Q ss_pred Cc-eEEEEEEEecchh----hHHHHHHHHHHhccc--CCcc----ceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhh
Q 043104 261 PE-TVTVFRAERLLAE----NATDVVYKWQLVAPA--TDDN----LFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVT 329 (570)
Q Consensus 261 p~-~~~~~~~~~~~~~----~a~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~ 329 (570)
|+ .+..+.+.|+.+. ...+++++|+++... .|++ +...+.+... ... .+.+...|.|+.++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~~ 318 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSR---AAG--QILLDIQIDGGLDGAEA 318 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECT---TSC--EEEEEEEEETTSTTHHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccC---CCC--ceEEEEEeccCHHHHHH
Confidence 75 4556666665432 235788888887643 4555 3333333221 111 23455678888766554
Q ss_pred hhhcc---Ccc-CC-CcccceeeecHHHHHHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHH
Q 043104 330 LLAKD---FPE-LG-LKKENVMEMSWIQSVLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMM 404 (570)
Q Consensus 330 ~~~~~---f~~-lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~ 404 (570)
++++. +.+ ++ +....+.+++|.+....+.. .+ .. ..+++.++.++.++++++.++.+++.+.
T Consensus 319 ~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~--------~~-~~~~~~~s~~~~~~~~~~~i~~~~~~~~ 385 (521)
T 2ipi_A 319 LLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKF----DT--------GG-FDRTKSKGAYLRKPWTAAQAATLYRHLS 385 (521)
T ss_dssp HHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCC----CC--------TT-CCEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcC----CC--------CC-CccceeeccccccCCCHHHHHHHHHHHH
Confidence 44432 222 33 34456788999985432211 00 00 0234567888877799999999999887
Q ss_pred HcC--ceEEEEeecCCccccCCCCCCCCCccCCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhcCcc------cCCC
Q 043104 405 ELG--KIGLVFNPYGGKMAEIPASETAFPHRAGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMTPFV------SKSP 476 (570)
Q Consensus 405 ~~~--~~~~~~~~~GG~~~~v~~~~taf~hR~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~p~~------~~~~ 476 (570)
+.+ .+.+.++++||++++++.++|+|+||+ .++.+++...|.++ +.++...+|++++++.+.+.. ....
T Consensus 386 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~ 462 (521)
T 2ipi_A 386 ADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPDDRT 462 (521)
T ss_dssp SCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSSSSB
T ss_pred hCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcccCCC
Confidence 643 467889999999999999999999999 68999999999875 345778999999999997322 1123
Q ss_pred CcccccCCCCccCCCCCCCCccccchhhhhhhccccHHHHHHhhhhcCcCCcccCCCCCCCC
Q 043104 477 RSAYLNYRDVDIGINHHGEDSYAEGKVYGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPTQ 538 (570)
Q Consensus 477 ~~~YvNy~d~dlg~~~~~~~~~~~~~~~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~~ 538 (570)
.++|+||+|.|++..+. ++++ ..|++.|||+||+||++||+||||+|+|+++|||||.
T Consensus 463 ~g~Y~Ny~d~~~~~~~~-~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 463 EGTFINYPDVDLVDERW-NTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CCCCTTSCCGGGGCTTT-SCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CceEeCCCCcccccccc-ccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 57999999998642110 1111 2499999999999999999999999999999999984
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=3.8e-69 Score=594.99 Aligned_cols=466 Identities=26% Similarity=0.420 Sum_probs=348.5
Q ss_pred CHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEe
Q 043104 41 SFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRS 120 (570)
Q Consensus 41 ~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrg 120 (570)
|...|.....+...-+....|++|+|+.|+++++. +|.|| ...|.+||+|+|++||+++|++|+++++|++|||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~Y~~~~~~--~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~g 89 (530)
T 2y3s_A 16 DIPTTENLYFQGSEFMKHIDSVAPGDIRYEDLRRG--ENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRS 89 (530)
T ss_dssp ------------------CCEECTTSTTHHHHTCC--SCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cchhHHHHHhhhhhccCCceEECCCCccHHHHHhH--hhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 44556544322211022457899999999998642 35555 5689999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHh-cCCcCeecCCCCCcceeccccccCcc
Q 043104 121 GGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQ-KSKLHGYPAGVCPTVGVGGHLSGGGY 199 (570)
Q Consensus 121 gGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~gGg~ 199 (570)
|||++.+.+.... ++++|||++|++|++|+++++|+||||+++++|++++.+ +| +.++.|.|++|||||+++|||+
T Consensus 90 gGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 166 (530)
T 2y3s_A 90 GGHCYEDFVANSD-VRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGY 166 (530)
T ss_dssp SCCCSSSTTTCTT-CCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCC
T ss_pred CCCCCCCCcccCC-CeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCC
Confidence 9999998765432 489999999999999999999999999999999999985 77 7889999999999999999999
Q ss_pred CCCcccccchhhceeEEEEEc--cCceEe--e-ccC-CCc--hhhHHhhccCCCceEEEEeeEEee------------ee
Q 043104 200 GNMLRKFGLSTDNVVDAKIVD--VRGRIL--D-RKA-MGE--DLFWAIRGGGGASFGVVLAYKIKL------------VP 259 (570)
Q Consensus 200 G~~~~~~G~~~D~v~~~~vV~--a~G~iv--~-~~~-~~~--DLfwa~rGgggg~fGVVt~~t~kl------------~p 259 (570)
|+++++||+++|+|+++|||+ ++|+++ + +.. +++ |||||+||||+|+|||||+++||+ +|
T Consensus 167 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p 246 (530)
T 2y3s_A 167 GPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLP 246 (530)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSC
T ss_pred CcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccC
Confidence 999999999999999999999 559974 3 332 455 599999998778999999999999 99
Q ss_pred cCc-eEEEEEEEecch----hhHHHHHHHHHHhccc--CCcc----ceEEEEEeeccCCCCCeEEEEEEEEEecCcchhh
Q 043104 260 VPE-TVTVFRAERLLA----ENATDVVYKWQLVAPA--TDDN----LFMRMLLQPVTRNKKPTVRASIVALYLGGADSLV 328 (570)
Q Consensus 260 ~p~-~~~~~~~~~~~~----~~a~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 328 (570)
.|+ .+..+.+.|+.+ +...++++.|+++... .|++ +...+.+... ... .+.+...|.|+.++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~ 321 (530)
T 2y3s_A 247 RPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS---QSG--ALAMTTQLDATGPDAE 321 (530)
T ss_dssp CCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG---GGS--EEEEEEEEECCSTTHH
T ss_pred CCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC---CCC--cEEEEEEEeCCHHHHH
Confidence 875 456666666543 2245788888877643 4555 2333333221 111 2445567888876655
Q ss_pred hhhhcc---Ccc-CC-CcccceeeecHHHHHHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHH
Q 043104 329 TLLAKD---FPE-LG-LKKENVMEMSWIQSVLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQM 403 (570)
Q Consensus 329 ~~~~~~---f~~-lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~ 403 (570)
+++.+. +.+ ++ +....+.+++|.+....+...+.+ . . ..+++.|+.|++++++++.++.+++.+
T Consensus 322 ~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~--~~r~~~~s~~~~~~~~~~~i~~~~~~~ 390 (530)
T 2y3s_A 322 KRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDG--------D-M--TGRAKIKAAYARRSFDDRQIGTLYTRL 390 (530)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCCC--------C-C--CSEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCCC--------c-c--cccceeeccccccCCCHHHHHHHHHHH
Confidence 544432 222 33 344567889998865433211110 0 0 124566788888789999999999988
Q ss_pred HHcC----ceEEEEeecCCccccCCCCCCCCCccCCceEEEEEEEEeCCCCchHHHHHHHHHHHHHhhhc------Cccc
Q 043104 404 MELG----KIGLVFNPYGGKMAEIPASETAFPHRAGNLFKIQYSISWSDPGTEIEEDRLSQATSLYSFMT------PFVS 473 (570)
Q Consensus 404 ~~~~----~~~~~~~~~GG~~~~v~~~~taf~hR~~~~~~i~~~~~W~~~~~~~~~~~~~wi~~~~~~~~------p~~~ 473 (570)
.+.+ .+.+.++++||++++++.++|+|+||+ .+|++++...|.++. .++++.+|++++++.|. |+.+
T Consensus 391 ~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~ 467 (530)
T 2y3s_A 391 TSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPG 467 (530)
T ss_dssp HCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTT
T ss_pred HhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 7532 367889999999999999999999999 689999999998764 34778999999999997 3322
Q ss_pred CCCCcccccCCCCccCCCCCCCCccccchhhhhhhccccHHHHHHhhhhcCcCCcccCCCCCCCC
Q 043104 474 KSPRSAYLNYRDVDIGINHHGEDSYAEGKVYGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPTQ 538 (570)
Q Consensus 474 ~~~~~~YvNy~d~dlg~~~~~~~~~~~~~~~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~~ 538 (570)
....++|+||+|.|++.++ .++++ ..|++.|||+||+||++||+||||+|+|+++|+|||.
T Consensus 468 ~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 468 GAADGAYVNYPDVDLADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp TTBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CCCCceEeCCcCccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 2245799999999875321 12222 2499999999999999999999999999999999985
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.3e-68 Score=588.04 Aligned_cols=456 Identities=23% Similarity=0.421 Sum_probs=356.6
Q ss_pred ccCHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEE
Q 043104 39 YESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKI 118 (570)
Q Consensus 39 ~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~v 118 (570)
.+.|.+|+... ...+++|+++.|.... .+|+......|.+||+|+|++||+++|++|+++++|++|
T Consensus 6 ~~~l~~~l~~~--------~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 6 FNSINACLAAA--------DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp TCHHHHHHHHT--------TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhhCcC--------CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 45678888742 2368899999999752 357766678999999999999999999999999999999
Q ss_pred EeCCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCc
Q 043104 119 RSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGG 198 (570)
Q Consensus 119 rggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg 198 (570)
|||||++.+.+....+++++|||++|++|++| ++++|+||||+++++|++++.+++ ++.+|.|.|++|||||+++|||
T Consensus 72 ~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg 149 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGG 149 (503)
T ss_dssp ESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCC
T ss_pred ECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCC
Confidence 99999998866542224899999999999999 889999999999999999997775 4888999999999999999999
Q ss_pred cCCCcccccchhhceeEEEEEccCceEee-ccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecch-hh
Q 043104 199 YGNMLRKFGLSTDNVVDAKIVDVRGRILD-RKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-EN 276 (570)
Q Consensus 199 ~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~-~~ 276 (570)
+|+++++||+++|+|++++||++||++++ ++.+|+|||||+|||| |+|||||+++||++|.|+....+.+.++++ ++
T Consensus 150 ~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 228 (503)
T 1zr6_A 150 YGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQ 228 (503)
T ss_dssp CSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHH
T ss_pred CCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHH
Confidence 99999999999999999999999999998 6678999999999996 599999999999999998777777666543 34
Q ss_pred HHHHHHHHHHhccc-CCccceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCccCCC--cccceeeecHHHH
Q 043104 277 ATDVVYKWQLVAPA-TDDNLFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPELGL--KKENVMEMSWIQS 353 (570)
Q Consensus 277 a~~~~~~~~~~~~~-~p~~l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg~--~~~~~~~~~~~~~ 353 (570)
+.+++++|+++... +|++++..+.+... .+.+..+|+|+.+++.+++.+.+..++. ....+..++|.+.
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~ 300 (503)
T 1zr6_A 229 HVAGLKALQDWAQNTMPRELSMRLEINAN--------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQ 300 (503)
T ss_dssp HHHHHHHHHHHHHHTCCTTBCCEEEEETT--------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHhhcCChhHEEEEEEeCC--------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHH
Confidence 66889999998876 89998887766431 3566788999988776666653222332 2345678899875
Q ss_pred HHHHhhcCCCCCccccccCCCCCccccccccccccCCCCHHHHHHHHHHHH-HcC----c-eEEEEeecCC---ccccCC
Q 043104 354 VLWWANFDNGTSPNVLLDRDLNSADFLKRKSDYVQKPIPKYSLNLLWKQMM-ELG----K-IGLVFNPYGG---KMAEIP 424 (570)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ks~~~~~~~~~~~i~~~~~~~~-~~~----~-~~~~~~~~GG---~~~~v~ 424 (570)
...+.+ +..... .........++.++.++++ ++++.++.+++.+. ... . ..+.++++|| ++++++
T Consensus 301 ~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~ 374 (503)
T 1zr6_A 301 INTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVS 374 (503)
T ss_dssp HTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSC
T ss_pred HHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCC
Confidence 433221 111000 0011112345678888876 89999999999887 432 1 3578999999 899999
Q ss_pred CCCCCCCccCCceEEEEEEEEe-----CCCCchHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccCCCCCCCCccc
Q 043104 425 ASETAFPHRAGNLFKIQYSISW-----SDPGTEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIGINHHGEDSYA 499 (570)
Q Consensus 425 ~~~taf~hR~~~~~~i~~~~~W-----~~~~~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg~~~~~~~~~~ 499 (570)
+++|+|+||+ .+|++++...| .++. .++...+|++++++.+.........++|+||+|.+++
T Consensus 375 ~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~---------- 441 (503)
T 1zr6_A 375 NDETAYAHRD-QLWLWQFYDSIYDYENNTSP--YPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT---------- 441 (503)
T ss_dssp TTTSSCCCTT-CSEEEEEEEEETTTTTCCTT--TTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC----------
T ss_pred cccCCccccc-ceeEEEEEeeeccccCCCcc--chHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc----------
Confidence 9999999998 68888887776 2321 1233456666666555443221124799999998742
Q ss_pred cchhhhhhhccccHHHHHHhhhhcCcCCcccCCCCCCCCC
Q 043104 500 EGKVYGEKYFNGNFDRLVKVKTMVDPENFFRNEQSIPTQP 539 (570)
Q Consensus 500 ~~~~~g~~Yfg~N~~RL~~IK~kyDP~n~F~~~qsI~~~~ 539 (570)
...|++.|||+||+||++||+||||+|+|+++|+|+|..
T Consensus 442 -~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 -KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp -HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred -cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 136899999999999999999999999999999999853
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2.3e-66 Score=564.72 Aligned_cols=436 Identities=20% Similarity=0.282 Sum_probs=341.3
Q ss_pred cceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeE
Q 043104 58 SNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFF 137 (570)
Q Consensus 58 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gv 137 (570)
++.|++|+|+.|+..++ +|+......|.+|++|+|++||+++|++|+++++|+++||||||+.+.+... +++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--CeE
Confidence 67899999999998643 5777777899999999999999999999999999999999999999877544 489
Q ss_pred EEEccCCccEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccchhhceeEEE
Q 043104 138 ILDMFNLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAK 217 (570)
Q Consensus 138 vIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~ 217 (570)
+|||++|++|++|+++.+|+||||+++++|++++.++| +.+|+|.|+++||||+++|||+|+++++||+.+|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999987 8889999999999999999999999999999999999999
Q ss_pred EEccCceEee-ccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHH--HHHHHHHHhcccCCcc
Q 043104 218 IVDVRGRILD-RKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENAT--DVVYKWQLVAPATDDN 294 (570)
Q Consensus 218 vV~a~G~iv~-~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~--~~~~~~~~~~~~~p~~ 294 (570)
||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+.+..+.+.++.++ +. ++++.|+++...+|++
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTTTT
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCcHh
Confidence 9999999998 6677899999999985 7999999999999999766666666676543 45 7888999988777887
Q ss_pred ceEEEEEeeccCCCCCeEEEEEEEEEecCcchhhhhhhccCccCC-CcccceeeecHHHHHHHHhhcCCCCCccccccCC
Q 043104 295 LFMRMLLQPVTRNKKPTVRASIVALYLGGADSLVTLLAKDFPELG-LKKENVMEMSWIQSVLWWANFDNGTSPNVLLDRD 373 (570)
Q Consensus 295 l~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~f~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (570)
+...+ .......+.. .+.+...|.|+.++....+.+ |.+++ +....+..++|.+......... .. .
T Consensus 241 ~~~~~-~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~ 307 (459)
T 2bvf_A 241 IYPSV-FVGVDENRAP--SVTVCVGHLGGLDIAERDIAR-LRGLGRTVSDSIAVRSYDEVVALNAEVG-SF--------E 307 (459)
T ss_dssp CCCEE-EEEECTTCCE--EEEEEEECCSCHHHHHHHHHH-HHTTSCCSEECCEEECHHHHHHHHHHHS-CC--------C
T ss_pred hcccc-ccCcccCCCc--eEEEEEEEeCCHHHHHHHHHH-HHHhCcchhcceeecCHHHHHhcccccc-cC--------C
Confidence 74433 2211111222 345566788987665555553 44454 3345678899987543311000 00 0
Q ss_pred CCCcccccc-ccccccCCCCHHHHHHHHHHHHHcC-ce-EEEEeecCCccccCCCCCCCCCccCCceEEEEEEEEeCCCC
Q 043104 374 LNSADFLKR-KSDYVQKPIPKYSLNLLWKQMMELG-KI-GLVFNPYGGKMAEIPASETAFPHRAGNLFKIQYSISWSDPG 450 (570)
Q Consensus 374 ~~~~~~~k~-ks~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~~~GG~~~~v~~~~taf~hR~~~~~~i~~~~~W~~~~ 450 (570)
.. ...+.. ++.++.++++.+.++++++.+.+.+ .. .+.++.+||++.+ .+.|||+||+. .| +++...|.++.
T Consensus 308 ~~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~ 382 (459)
T 2bvf_A 308 DG-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRDA-MG-VLALAEWSGAA 382 (459)
T ss_dssp CS-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTS
T ss_pred CC-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCCc-ce-EEEEEEeCCCc
Confidence 11 112222 5666653466677777766654433 22 3455566888876 67799999995 67 88899998764
Q ss_pred chHHHHHHHHHHHHHhhhcCcccCCCCcccccCCCCccCCCCCCCCccccchhhhhhhcccc-HHHHHHhhhhcCcCCcc
Q 043104 451 TEIEEDRLSQATSLYSFMTPFVSKSPRSAYLNYRDVDIGINHHGEDSYAEGKVYGEKYFNGN-FDRLVKVKTMVDPENFF 529 (570)
Q Consensus 451 ~~~~~~~~~wi~~~~~~~~p~~~~~~~~~YvNy~d~dlg~~~~~~~~~~~~~~~g~~Yfg~N-~~RL~~IK~kyDP~n~F 529 (570)
+ .++.+.+|++++++.|+|+....+.++|+||+|.+. ..|.+.|||+| |+||++||+||||+|+|
T Consensus 383 ~-~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF 448 (459)
T 2bvf_A 383 P-GSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRF 448 (459)
T ss_dssp T-TTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCC
T ss_pred c-chHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCccccc
Confidence 1 235678999999999999852113578999999762 36889999986 99999999999999999
Q ss_pred cCCCCCCC
Q 043104 530 RNEQSIPT 537 (570)
Q Consensus 530 ~~~qsI~~ 537 (570)
+++|+|||
T Consensus 449 ~~~~~I~p 456 (459)
T 2bvf_A 449 RHNYNIDP 456 (459)
T ss_dssp CSSSCCCC
T ss_pred CCCCCCCC
Confidence 99999997
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2e-40 Score=367.02 Aligned_cols=226 Identities=17% Similarity=0.248 Sum_probs=177.5
Q ss_pred cccCHHHHhcccCCCCCCCccceEEcCCCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHH--c-CC
Q 043104 38 AYESFLQCLTQQTNSSDQQISNIVVTQTNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQ--V-GF 114 (570)
Q Consensus 38 ~~~~~~~cl~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~--~-~~ 114 (570)
..+++++||.... +.+.+.+ +...+.. + ...|+......|.+|++|+|++||+++|++|++ + ++
T Consensus 30 ~~~~~~~~l~~~~------~~~~v~~-~~~~~~~----~--~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~ 96 (534)
T 1w1o_A 30 RGRPWPASLAALA------LDGKLRT-DSNATAA----A--STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPY 96 (534)
T ss_dssp ----------CTT------TTTCEEC-SHHHHHH----T--SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCC
T ss_pred chHHHHHHHHhcC------CCceEec-CHHHHHH----H--hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCc
Confidence 4557889987631 2345655 2223332 2 224766667789999999999999999999998 6 99
Q ss_pred eEEEEeCCCCCCCCCccCCCCeEEEEccCCcc------EEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCC-CCc
Q 043104 115 QLKIRSGGHDYEGLSYISDRPFFILDMFNLRS------IDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGV-CPT 187 (570)
Q Consensus 115 ~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~------i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~-~~~ 187 (570)
|+.+||||||+.|.+.+.+ +++|||++||+ +++|+++.+++||||+++.+|++++.++| +..+.+. +..
T Consensus 97 ~v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~ 172 (534)
T 1w1o_A 97 TIAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLY 172 (534)
T ss_dssp CEEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCC
T ss_pred eEEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCC
Confidence 9999999999998877654 89999999998 58998889999999999999999999988 5555443 367
Q ss_pred ceeccccccCccCCCcccccchhhceeEEEEEccCceEee-ccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEE
Q 043104 188 VGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-RKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTV 266 (570)
Q Consensus 188 vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~ 266 (570)
++|||.+++||.|..+++||..+|+|++++||++||++++ +..+|+||||++|||+ |+|||||++++|++|.|+...+
T Consensus 173 ~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~ 251 (534)
T 1w1o_A 173 LTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARW 251 (534)
T ss_dssp SBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEE
T ss_pred EEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEE
Confidence 8999999999999999999999999999999999999998 6667899999999995 7999999999999999987666
Q ss_pred EEEEecchhhHHHHH
Q 043104 267 FRAERLLAENATDVV 281 (570)
Q Consensus 267 ~~~~~~~~~~a~~~~ 281 (570)
+.+.+...+.+.+.+
T Consensus 252 ~~~~~~~~~~~~~~~ 266 (534)
T 1w1o_A 252 VRFVYTDFAAFSADQ 266 (534)
T ss_dssp EEEEESCHHHHHHHH
T ss_pred EEEEeCCHHHHHHHH
Confidence 666664333333333
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1.5e-32 Score=302.95 Aligned_cols=200 Identities=21% Similarity=0.315 Sum_probs=168.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeC-----CC-
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQ-VGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDV-----KD- 153 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~-~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~-----~~- 153 (570)
.|+......|.+|++|+|++||+++|++|++ +++|+.+||||||+.|.+.+.+ +|+|||++||+|++|. ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3666566789999999999999999999996 9999999999999998776544 8999999999987776 55
Q ss_pred -CeEEEcCCCCHHHHHHHHH-hcCCcCeecC-CCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-cc
Q 043104 154 -ESAWVEAGATLGELYYRIW-QKSKLHGYPA-GVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-RK 229 (570)
Q Consensus 154 -~~v~V~aG~~~~~l~~~l~-~~g~~l~~~~-G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~ 229 (570)
.+++||||+++.++++++. ++| +..+. +.++.++|||.++++|.|..+.+||..+|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999876655 887 44222 334678999999999999999999999999999999999999998 55
Q ss_pred CCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHH
Q 043104 230 AMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQ 285 (570)
Q Consensus 230 ~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 285 (570)
..|+||||++||+ .|+|||||++++||+|.|+...++.+.|+..+++.+.+..+.
T Consensus 209 ~~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~ 263 (524)
T 2exr_A 209 IENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLV 263 (524)
T ss_dssp SSSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHH
Confidence 6789999999999 589999999999999999976666666654443444444443
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=6.1e-32 Score=294.59 Aligned_cols=199 Identities=17% Similarity=0.235 Sum_probs=167.7
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHc--CCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccE-EEeCCCCeEE
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQV--GFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSI-DVDVKDESAW 157 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~--~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i-~vd~~~~~v~ 157 (570)
+|.. ....|.+|++|+|++||+++|++|+++ ++|++++|+|||+.+.+... +|++|||++|++| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4743 578999999999999999999999999 79999999999997766543 4899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-ccC-CCchh
Q 043104 158 VEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-RKA-MGEDL 235 (570)
Q Consensus 158 V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~-~~~DL 235 (570)
||||+++.+|++++.++|..+...+|. +.++|||.+++|++|..+++||..+|+|+++++|++||++++ +.. +|+||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999998433222344 567899999999999999999999999999999999999998 555 78999
Q ss_pred hHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHHH
Q 043104 236 FWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQL 286 (570)
Q Consensus 236 fwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 286 (570)
|||+||| +|+|||||+++||++|.++....... +.. .+..++++.+.+
T Consensus 191 f~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~~-~~~-~~l~~~~~~~~~ 238 (481)
T 4feh_A 191 FWATVGG-NGLTGIIMRATIEMTPTSTAYFIADG-DVT-ASLDETIALHSD 238 (481)
T ss_dssp HHHHTTC-TTTTCEEEEEEEECEECSCSEEEEEE-EEC-SSHHHHHHHHSS
T ss_pred HHHhhcc-CCCceEEEEEEEEEEeCCccEEEEEE-EeC-CCHHHHHHHHHH
Confidence 9999998 57999999999999999864332221 222 225566666654
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=1.2e-32 Score=311.43 Aligned_cols=203 Identities=24% Similarity=0.213 Sum_probs=175.8
Q ss_pred cCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccC---CCCeEEEEccCCccE-EEeCCCCeEE
Q 043104 82 FNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYIS---DRPFFILDMFNLRSI-DVDVKDESAW 157 (570)
Q Consensus 82 ~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~---~~~gvvIdl~~l~~i-~vd~~~~~v~ 157 (570)
|+......|.+||+|+|++||+++|++|+++++||.+|||||++.|.+.+. ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 555556789999999999999999999999999999999999987655432 125899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-----ccCCC
Q 043104 158 VEAGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-----RKAMG 232 (570)
Q Consensus 158 V~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-----~~~~~ 232 (570)
||||+++.+|.++|.++|..+++.+++....+|||++++++.|+.+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999995555556777888999999999999999999999999999999999999986 23467
Q ss_pred chhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHH
Q 043104 233 EDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQ 285 (570)
Q Consensus 233 ~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 285 (570)
+||+|+++|+ .|+|||||++++||+|.|+....+.+.|+..+++.+++..+.
T Consensus 358 yDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 358 PDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIA 409 (658)
T ss_dssp SCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred cCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHH
Confidence 8999999999 689999999999999999977777777765444555555443
No 15
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.2e-30 Score=280.71 Aligned_cols=175 Identities=19% Similarity=0.266 Sum_probs=155.9
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccE-EEeCCCCeEEEc
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSI-DVDVKDESAWVE 159 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~ 159 (570)
.|+......|.+|++|+|++||+++|++| +|++++||||++.+.+... .++++|||++|++| ++|+++++++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~-~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG-DGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC-TTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC-CCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 48877788999999999999999999998 8999999999998877632 24899999999997 999999999999
Q ss_pred CCCCHHHHHHHHHhcCCcCeec-CCCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-ccCCCchhhH
Q 043104 160 AGATLGELYYRIWQKSKLHGYP-AGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-RKAMGEDLFW 237 (570)
Q Consensus 160 aG~~~~~l~~~l~~~g~~l~~~-~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~DLfw 237 (570)
||+++.+|.+++.++| +.+| .+.++.++|||.+++|++|.. .+||..+|+|+++++|++||++++ +..+++ ||
T Consensus 87 aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 9999999999999998 4556 377788999999999999976 699999999999999999999998 544555 99
Q ss_pred HhhccCCCceEEEEeeEEeeeecCceEEE
Q 043104 238 AIRGGGGASFGVVLAYKIKLVPVPETVTV 266 (570)
Q Consensus 238 a~rGgggg~fGVVt~~t~kl~p~p~~~~~ 266 (570)
+++|+ .|++||||++++|++|.|+....
T Consensus 162 ~~~g~-~G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 162 GAVTS-LGALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GTSSC-TTTTCEEEEEEEECEECCEEEEE
T ss_pred eEEec-CCCCEEEEEEEEEEEecCceEEE
Confidence 99998 47999999999999999975433
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.98 E-value=1.1e-31 Score=292.33 Aligned_cols=204 Identities=20% Similarity=0.247 Sum_probs=176.7
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccE-EEeCCCCeEEEc
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSI-DVDVKDESAWVE 159 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~ 159 (570)
.|+......|.+||+|+|++||+++|++|+++++|+++||||||+.|.+.+.+ ++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 47655667899999999999999999999999999999999999998877643 5899999999998 899999999999
Q ss_pred CCCCHHHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-c-----cCCCc
Q 043104 160 AGATLGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-R-----KAMGE 233 (570)
Q Consensus 160 aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~-----~~~~~ 233 (570)
||+++.+|++++.++|..+++..+.+..++|||.+.+++.|..+.+||..+|+|+++++|++||++++ . ...++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 99999999999999984333334666788999999999999999999999999999999999999986 1 34578
Q ss_pred hhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHHH
Q 043104 234 DLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQL 286 (570)
Q Consensus 234 DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 286 (570)
||+|+++|+ +|+|||||++++|++|.|+....+.+.++..+++.+++..+++
T Consensus 202 dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 999999998 5799999999999999998766666666654556666666654
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=7.6e-31 Score=292.06 Aligned_cols=198 Identities=19% Similarity=0.217 Sum_probs=167.8
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCC--CCeEEEEccCCccE-EEeCCCCeEEEcCCC
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISD--RPFFILDMFNLRSI-DVDVKDESAWVEAGA 162 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~--~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~ 162 (570)
....|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.+.. +++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987666531 25899999999998 899999999999999
Q ss_pred CHHHHHHHHHhcCCcCeecCCC--CCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee----ccCCCchhh
Q 043104 163 TLGELYYRIWQKSKLHGYPAGV--CPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD----RKAMGEDLF 236 (570)
Q Consensus 163 ~~~~l~~~l~~~g~~l~~~~G~--~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~----~~~~~~DLf 236 (570)
++.+|++++.++| +.++... ...++|||.+++++.|+.+.+||.++|+|++++||++||++++ +...++||+
T Consensus 214 ~~~~l~~~l~~~G--l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 214 MGPELEKQLHKQG--VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp BHHHHHHHHHHTT--EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred cHHHHHHHHHHcC--CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 9999999999998 5554433 3457899999999999999999999999999999999999886 345789999
Q ss_pred HHhhccCCCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHHH
Q 043104 237 WAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQL 286 (570)
Q Consensus 237 wa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 286 (570)
|+++|+ +|+|||||+++||++|.|+....+.+.++..+++.+++..+..
T Consensus 292 ~~~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 292 HIILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp HHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hhhccC-CCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 999999 5799999999999999998766666667544445555555543
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=7.4e-30 Score=281.52 Aligned_cols=198 Identities=19% Similarity=0.252 Sum_probs=165.9
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCCccCCCCeEEEEccCCccE-EEeCCCCeEEEcCCCCH
Q 043104 87 TLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYE-GLSYISDRPFFILDMFNLRSI-DVDVKDESAWVEAGATL 164 (570)
Q Consensus 87 ~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~-g~s~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~~ 164 (570)
...|.+||+|+|++||+++|++|+++++|+.++|||||+. |.+.....++++|||++||+| ++|+++++++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4679999999999999999999999999999999999986 655431124899999999999 99999999999999999
Q ss_pred HHHHHHHHhcCCcCeecCC---CCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-c--cCCCchhhHH
Q 043104 165 GELYYRIWQKSKLHGYPAG---VCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-R--KAMGEDLFWA 238 (570)
Q Consensus 165 ~~l~~~l~~~g~~l~~~~G---~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~--~~~~~DLfwa 238 (570)
.+|++++.++| +.++.+ ....+||||.+++||.|.. +||...|+|++++||++||++++ . ...++|+|++
T Consensus 134 ~~l~~~l~~~G--l~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENN--LPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTT--CSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcC--CcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 99999999998 555544 2336889999988888876 99999999999999999999998 2 2357888777
Q ss_pred hhccCC---------CceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHHHhc
Q 043104 239 IRGGGG---------ASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQLVA 288 (570)
Q Consensus 239 ~rGggg---------g~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~ 288 (570)
.||+.| ++|||||++++|++|.|+....+.+.|+..+++.++++.++++.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 776632 58999999999999999977667777765455666666666543
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.8e-29 Score=280.45 Aligned_cols=197 Identities=12% Similarity=0.144 Sum_probs=165.2
Q ss_pred cceEEcC-CCcchHHHHHhhhhccccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCC---
Q 043104 58 SNIVVTQ-TNSSYASVLRAYIRNARFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISD--- 133 (570)
Q Consensus 58 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~--- 133 (570)
+..+++| +++.|.... ..|+......|.+|++|+|++||+++|++|+++++|++++|||||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567788 999999742 358877788999999999999999999999999999999999999976554322
Q ss_pred CCeEEEEc-cCCccEEEeC--CCCeEEEcCCCCHHHHHHHHHhcCCcCeecCCCC-CcceeccccccCccCCC-------
Q 043104 134 RPFFILDM-FNLRSIDVDV--KDESAWVEAGATLGELYYRIWQKSKLHGYPAGVC-PTVGVGGHLSGGGYGNM------- 202 (570)
Q Consensus 134 ~~gvvIdl-~~l~~i~vd~--~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~G~~-~~vgvgG~~~gGg~G~~------- 202 (570)
.++++||| ++|++|++|+ ++++|+||||+++.+|++++.++| +.++...+ +.++|||.+++|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~ 160 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQT 160 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCcc
Confidence 24899999 8999999998 789999999999999999999998 45554332 56789999887777765
Q ss_pred ---cccccchhhceeEEEEEccCce---EeeccCCCchhhHHhhccCCCceEEEEeeEEeeeecCceEE
Q 043104 203 ---LRKFGLSTDNVVDAKIVDVRGR---ILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVT 265 (570)
Q Consensus 203 ---~~~~G~~~D~v~~~~vV~a~G~---iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~ 265 (570)
+.+||..+|+|+++++|++||+ +++...+++||+|+++|.| . ||||+++||++|.++...
T Consensus 161 ~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 161 TLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp CCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEE
T ss_pred cccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEE
Confidence 6789999999999999999999 6662234789999999763 3 899999999999987543
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=5.8e-28 Score=268.41 Aligned_cols=201 Identities=18% Similarity=0.132 Sum_probs=163.3
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCCccCCCCeEEEEc-cCCccE-EEeCCCCeEEEcCCC
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYE-GLSYISDRPFFILDM-FNLRSI-DVDVKDESAWVEAGA 162 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~-g~s~~~~~~gvvIdl-~~l~~i-~vd~~~~~v~V~aG~ 162 (570)
....|.+||+|+|++||+++|++|+++++|+.+||+||++. |.+.+...++|+||| ++||+| ++|+++++|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34679999999999999999999999999999999999986 555431124899999 999999 999999999999999
Q ss_pred CHHHHHHHHHhcCCc--CeecCCCCCcceeccccccCccCCCcccccchhhceeEEEEEccCceEee-cc--CCCc----
Q 043104 163 TLGELYYRIWQKSKL--HGYPAGVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGRILD-RK--AMGE---- 233 (570)
Q Consensus 163 ~~~~l~~~l~~~g~~--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~--~~~~---- 233 (570)
++.+|++++.++|.. +++.++.....||||.++++|.|.. +||..+|+|++++||++||++++ .. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999854 3222334346789999988888864 99999999999999999999998 32 1221
Q ss_pred -----------hhhHHhhccC----------CCceEEEEeeEEeeeecCceEEEEEEEecchhhHHHHHHHHHHhc
Q 043104 234 -----------DLFWAIRGGG----------GASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQLVA 288 (570)
Q Consensus 234 -----------DLfwa~rGgg----------gg~fGVVt~~t~kl~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~ 288 (570)
+++|+++++| +|+|||||++++||+|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6677776542 369999999999999999977777777765555666666666654
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.95 E-value=3.4e-28 Score=265.84 Aligned_cols=178 Identities=15% Similarity=0.176 Sum_probs=149.8
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCC---CCeEEEEcc-CCccEEEeCC--CC
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISD---RPFFILDMF-NLRSIDVDVK--DE 154 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~---~~gvvIdl~-~l~~i~vd~~--~~ 154 (570)
+|+......|.+|++|+|++||+++|++|+++++|++++|||||+.+..+..+ .++|+|||+ +|++|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 38888888999999999999999999999999999999999999863332211 248999995 7999999985 58
Q ss_pred eEEEcCCCCHHHHHHHHHhcCCcCeecC-CCCCcceeccccccCccCCC----------cccccchhhceeEEEEEccCc
Q 043104 155 SAWVEAGATLGELYYRIWQKSKLHGYPA-GVCPTVGVGGHLSGGGYGNM----------LRKFGLSTDNVVDAKIVDVRG 223 (570)
Q Consensus 155 ~v~V~aG~~~~~l~~~l~~~g~~l~~~~-G~~~~vgvgG~~~gGg~G~~----------~~~~G~~~D~v~~~~vV~a~G 223 (570)
+|+||||+++.+|+++|.++| +.++. +..+.++|||.+++|++|.. +++||..+|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 999999999999999999998 55652 33467899999999998886 689999999999999999999
Q ss_pred e-----EeeccCCCchhhHHhhccCCCceEEEEeeEEeeeecCce
Q 043104 224 R-----ILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPET 263 (570)
Q Consensus 224 ~-----iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~ 263 (570)
+ +++...+++||||+ |+|+ |. ||||+++||++|.++.
T Consensus 179 ~~~~~~i~~~s~~~~DL~a~-r~G~-G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 179 ASGAYALRKFARNDPQIAPL-LAHV-GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp TTTEEEEEEEETTSGGGHHH-HTCT-TS-SCEEEEEEEEEECCEE
T ss_pred CCceeeEEEeCCCChhHHHH-HhcC-CC-eEEEEEEEEEEECCce
Confidence 8 66633368998555 5553 35 6999999999999864
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=7.8e-28 Score=266.41 Aligned_cols=195 Identities=13% Similarity=0.103 Sum_probs=164.2
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCC----CeEEEEccCCccE-EEeCCCCeEEEcC
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDR----PFFILDMFNLRSI-DVDVKDESAWVEA 160 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~----~gvvIdl~~l~~i-~vd~~~~~v~V~a 160 (570)
....|.+||+|+|++||+++|++|+++++|+.++||||++.|.+.+.+. ++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3568999999999999999999999999999999999999887776532 3899999999999 7994 68999999
Q ss_pred CCCHHHHHHHHHhcCCcCeecC---CCCCcceeccccccCccCCCcccccchhh----------------ceeEEEEEcc
Q 043104 161 GATLGELYYRIWQKSKLHGYPA---GVCPTVGVGGHLSGGGYGNMLRKFGLSTD----------------NVVDAKIVDV 221 (570)
Q Consensus 161 G~~~~~l~~~l~~~g~~l~~~~---G~~~~vgvgG~~~gGg~G~~~~~~G~~~D----------------~v~~~~vV~a 221 (570)
|+++.+|++++.++| +.+|. +.|..++|||.++++++|..+.+||...| ||++++||++
T Consensus 121 Gv~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 999999999999998 44432 34556789999999999999999999999 9999999999
Q ss_pred CceEee-c-c----------------CCCc-----------------hhhHHh--hccCCCceEEEEeeEEeeeecCceE
Q 043104 222 RGRILD-R-K----------------AMGE-----------------DLFWAI--RGGGGASFGVVLAYKIKLVPVPETV 264 (570)
Q Consensus 222 ~G~iv~-~-~----------------~~~~-----------------DLfwa~--rGgggg~fGVVt~~t~kl~p~p~~~ 264 (570)
||++++ . . ..+. ||+|++ +|+ +|+||| |++++|++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEecCCeE
Confidence 999986 2 1 1223 888887 888 579999 99999999999876
Q ss_pred EEEEEEecchhhHHHHHHHHH
Q 043104 265 TVFRAERLLAENATDVVYKWQ 285 (570)
Q Consensus 265 ~~~~~~~~~~~~a~~~~~~~~ 285 (570)
..+.+.++..+++.+++..++
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 666666654444556666665
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.91 E-value=1.7e-24 Score=223.94 Aligned_cols=164 Identities=19% Similarity=0.125 Sum_probs=131.7
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHH
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLG 165 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~ 165 (570)
....|.++++|+|++||+++|++|+++++|+.++|||||+.+.+... ++++|||++|++|++| +.+++||||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~--~gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGI--RGVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCE--EEEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCC--CeEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 35689999999999999999999999999999999999987544333 3899999999999886 3599999999999
Q ss_pred HHHHHHHhcCC-cCeecCCCCCcceeccccccCccCCCcccc-cchhhceeEEEEEccCceEeeccCCCchhhHHhhccC
Q 043104 166 ELYYRIWQKSK-LHGYPAGVCPTVGVGGHLSGGGYGNMLRKF-GLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGG 243 (570)
Q Consensus 166 ~l~~~l~~~g~-~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~-G~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgg 243 (570)
+|++++.++|. ++.++.|.+.+ |||.+.. +.+.| |..+|+|+++++|++||++++.. .+|++|++|++.
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~-----NaGgyGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~ 197 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALHM-----NAGAYGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFST 197 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHH-----TCEETTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CT
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHHh-----CccCcccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcc
Confidence 99999999983 33456666554 3444432 22224 78999999999999999999822 369999999875
Q ss_pred CC-ceEEEEeeEEeeeecCc
Q 043104 244 GA-SFGVVLAYKIKLVPVPE 262 (570)
Q Consensus 244 gg-~fGVVt~~t~kl~p~p~ 262 (570)
.+ ++||||+++|||+|.|+
T Consensus 198 ~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 198 IAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTGGGCEEEEEEEECEECCH
T ss_pred cCCCCEEEEEEEEEEEeCCH
Confidence 43 57899999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=2.7e-24 Score=224.80 Aligned_cols=165 Identities=13% Similarity=0.032 Sum_probs=144.5
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeC--CCCeEEEcCCCC
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDV--KDESAWVEAGAT 163 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~--~~~~v~V~aG~~ 163 (570)
....|.++++|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+++ |++|+++. ++.+++||||++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 345789999999999999999999999999999999999876554 33 8999998 99998864 456899999999
Q ss_pred HHHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccc-hhhceeEEEEEcc-CceEeeccCCCchhhHHhhc
Q 043104 164 LGELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGL-STDNVVDAKIVDV-RGRILDRKAMGEDLFWAIRG 241 (570)
Q Consensus 164 ~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~-~~D~v~~~~vV~a-~G~iv~~~~~~~DLfwa~rG 241 (570)
|.+|.+++.++| | .|.+..+|++|.+ ||+.+++.+.||. ..|+|+++++|++ +|++++.. ++||+|++|+
T Consensus 103 ~~~l~~~a~~~G--l---~GlE~l~gIPGtV-GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQG--I---GGLENLALIPGCA-GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTT--C---TTCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcC--C---cCccccCCCCchh-HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 999999999998 3 4788888888854 9999999999998 8999999999999 99999832 3699999998
Q ss_pred cCC----CceEEEEeeEEeeeecCc
Q 043104 242 GGG----ASFGVVLAYKIKLVPVPE 262 (570)
Q Consensus 242 ggg----g~fGVVt~~t~kl~p~p~ 262 (570)
++. +++||||+++|||+|.++
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 754 379999999999999864
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.89 E-value=1.6e-23 Score=217.52 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=130.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHH
Q 043104 86 STLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLG 165 (570)
Q Consensus 86 ~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~ 165 (570)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++|++|++|. ++++||||+++.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 356799999999999999999999999999999999999876554333 8999999999999873 799999999999
Q ss_pred HHHHHHHhcCC-cCeecCCCCCcceeccccccCccCCCccccc-chhhceeEEEEEccCceEeeccCCCchhhHHhhccC
Q 043104 166 ELYYRIWQKSK-LHGYPAGVCPTVGVGGHLSGGGYGNMLRKFG-LSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGG 243 (570)
Q Consensus 166 ~l~~~l~~~g~-~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G-~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgg 243 (570)
+|++++.++|. ++.+.++... +|||.+..++ +.|| ..+|+|+++++|++||++++... .|++|++|...
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~na-----ggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNA-----GAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTC-----EETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccc-----ccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999883 2223333332 3556655443 3388 99999999999999999998222 38899999742
Q ss_pred ---CCceEEEEeeEEeeeec
Q 043104 244 ---GASFGVVLAYKIKLVPV 260 (570)
Q Consensus 244 ---gg~fGVVt~~t~kl~p~ 260 (570)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 23 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=1e-22 Score=212.19 Aligned_cols=164 Identities=15% Similarity=0.079 Sum_probs=142.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEE-EeCCC-CeEEEcCCCCH
Q 043104 87 TLKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSID-VDVKD-ESAWVEAGATL 164 (570)
Q Consensus 87 ~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~-vd~~~-~~v~V~aG~~~ 164 (570)
...|.++++|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+++ |++|. ++.++ .+++||||++|
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 45699999999999999999999999999999999999876553 33 8999997 99985 56666 69999999999
Q ss_pred HHHHHHHHhcCCcCeecCCCCCcceeccccccCccCCCcccccc-hhhceeEEEEEcc-CceEeeccCCCchhhHHhhcc
Q 043104 165 GELYYRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFGL-STDNVVDAKIVDV-RGRILDRKAMGEDLFWAIRGG 242 (570)
Q Consensus 165 ~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~-~~D~v~~~~vV~a-~G~iv~~~~~~~DLfwa~rGg 242 (570)
.+|.+++.++| + .|.+..+|++|. .||+..++.+.||. .+|+|.++++|++ +|++++.. ++|++|++|++
T Consensus 88 ~~l~~~~~~~G--l---~Gle~~~gIPGt-VGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s 159 (340)
T 1uxy_A 88 HRLVKYTLQEG--M---PGLENLALIPGC-VGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHHTT--C---CSCGGGTTCCSB-GGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBC
T ss_pred HHHHHHHHHCC--C---CccccccCCccc-hhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcC
Confidence 99999999988 3 577788888885 49999999999996 8899999999996 99999822 36999999987
Q ss_pred CC----CceEEEEeeEEeeeecCc
Q 043104 243 GG----ASFGVVLAYKIKLVPVPE 262 (570)
Q Consensus 243 gg----g~fGVVt~~t~kl~p~p~ 262 (570)
.. +++||||+++||+.|.++
T Consensus 160 ~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 160 IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 42 259999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=1.3e-21 Score=197.30 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=129.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCccCCCCeEEEEccCCccEEEeCCCCeEEEcCCCCHHHHH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLSYISDRPFFILDMFNLRSIDVDVKDESAWVEAGATLGELY 168 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~~~~l~ 168 (570)
.|. +++|+|++||+++| ++|+.++|+|||..+.+.+.+ +|++|++++|++|++| + +||||++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHHH
Confidence 456 99999999999999 899999999999886554332 3899999999999865 2 999999999999
Q ss_pred HHHHhcCCcCeecCCCCCcceeccccccCccCCCccccc-chhhceeEEEEEccCceEeeccCCCchhhHHhhccCCCce
Q 043104 169 YRIWQKSKLHGYPAGVCPTVGVGGHLSGGGYGNMLRKFG-LSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASF 247 (570)
Q Consensus 169 ~~l~~~g~~l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G-~~~D~v~~~~vV~a~G~iv~~~~~~~DLfwa~rGgggg~f 247 (570)
+++.++| | .|.++.+|++|. .||+.+++.+.|| ..+|+|+++++| +||++++.. ++|++|++|+++...-
T Consensus 89 ~~~~~~G--l---~Gle~~~giPGt-vGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~~ 159 (268)
T 2gqt_A 89 QEAARAG--L---SGLEGLLGIPAQ-VGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPPG 159 (268)
T ss_dssp HHHHHTT--E---ESCGGGTTCCCB-HHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCSTT
T ss_pred HHHHHcC--C---cCCccccCccch-hHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCCC
Confidence 9999988 4 477888899884 5999999999999 689999999999 999999832 3689999999852112
Q ss_pred EEEEeeEEeeeecC
Q 043104 248 GVVLAYKIKLVPVP 261 (570)
Q Consensus 248 GVVt~~t~kl~p~p 261 (570)
||||+++|||+|.+
T Consensus 160 gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 160 GIVTRVRLKLKERP 173 (268)
T ss_dssp CEEEEEEECCEECC
T ss_pred ceEEEEEEEEEeCC
Confidence 49999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.78 E-value=4e-19 Score=174.09 Aligned_cols=115 Identities=23% Similarity=0.270 Sum_probs=99.0
Q ss_pred EEEeCCCCeEEEcCCCCHHHHHHHHHhcCCcCeecC--CCCCcceeccccccCccCCCcccccchhhceeEEEEEccCce
Q 043104 147 IDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPA--GVCPTVGVGGHLSGGGYGNMLRKFGLSTDNVVDAKIVDVRGR 224 (570)
Q Consensus 147 i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~l~~~~--G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~~vV~a~G~ 224 (570)
|++|+++++++||||+++.+|++++.++| +.++. |.++. +|||++++|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 47899999999999999999999999988 55554 55555 999999999998 899999 99999999999999
Q ss_pred Eee-cc-----CCCchhhHHhhccCCCceEEEEeeEEeeeecCceEEEEEE
Q 043104 225 ILD-RK-----AMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRA 269 (570)
Q Consensus 225 iv~-~~-----~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p~~~~~~~~ 269 (570)
+++ +. ..++||||+++|+ +|+|||||+++||++|.|+....+..
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEEE
T ss_pred EEEECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEEE
Confidence 997 32 2458999999998 57999999999999999986554433
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.89 E-value=1.9e-05 Score=80.07 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=99.6
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CccCCCCeEEEEccC---CccEEEeCCCCeEEEcCCCCH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGL-SYISDRPFFILDMFN---LRSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~-s~~~~~~gvvIdl~~---l~~i~vd~~~~~v~V~aG~~~ 164 (570)
.|-..+.|+|.+|+.++++. ++.+.++.+||++.... ......++++||+++ |+.|+.+ ++.+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45568999999999988875 34679999999995321 111112479999984 6778764 457999999999
Q ss_pred HHHHHH-HHhcCC-cCee----cCCCC--CcceeccccccCccCCCcccccchhhcee-------EEEEEccCceEeecc
Q 043104 165 GELYYR-IWQKSK-LHGY----PAGVC--PTVGVGGHLSGGGYGNMLRKFGLSTDNVV-------DAKIVDVRGRILDRK 229 (570)
Q Consensus 165 ~~l~~~-l~~~g~-~l~~----~~G~~--~~vgvgG~~~gGg~G~~~~~~G~~~D~v~-------~~~vV~a~G~iv~~~ 229 (570)
.+|.+. +.+++. .|.. .+|.- +..+|||.+..+.. ..|.+. .+++..++|+ .+-.
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 333321 1111 12221 13567888866531 345443 5888999993 3311
Q ss_pred CCCchhhHHhhccCCCceEEEEeeEEeeeecC
Q 043104 230 AMGEDLFWAIRGGGGASFGVVLAYKIKLVPVP 261 (570)
Q Consensus 230 ~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~p 261 (570)
-.|+|..+|-..-..=-|||+++|.+.+..
T Consensus 149 --~~df~~g~~~t~l~~~eii~~i~ip~~~~~ 178 (287)
T 1ffv_C 149 --ADGFFLGTYMTLLEENEVMVEIRVPAFAQG 178 (287)
T ss_dssp --STTTEEETTEESCCTTCEEEEEEEECCCTT
T ss_pred --HHHHhcCcccccCCCCCEEEEEEecCCCCC
Confidence 258888876321112248999999876643
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.19 E-value=0.00042 Score=70.17 Aligned_cols=155 Identities=16% Similarity=0.087 Sum_probs=94.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CccCCCCeEEEEccC---CccEEEeCCCCeEEEcCCCCH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGL-SYISDRPFFILDMFN---LRSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~-s~~~~~~gvvIdl~~---l~~i~vd~~~~~v~V~aG~~~ 164 (570)
.|-..+.|+|.+|+.++++. ++-+.++.+|||+.... ......+.++||+++ |+.|+. +++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 45568999999999888753 34468899999995321 111112479999986 566766 4457999999999
Q ss_pred HHHHH--HHHhcCCcCee----cCCC--CCcceeccccccCccCCCcccccchhhcee-------EEEEEccCceEeecc
Q 043104 165 GELYY--RIWQKSKLHGY----PAGV--CPTVGVGGHLSGGGYGNMLRKFGLSTDNVV-------DAKIVDVRGRILDRK 229 (570)
Q Consensus 165 ~~l~~--~l~~~g~~l~~----~~G~--~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~-------~~~vV~a~G~iv~~~ 229 (570)
.+|.+ .+.+.-..|.- .++. -+..+|||.+..+. ...|.+. .+++..++|+ .+-.
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVA 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEE
Confidence 99994 44432111110 0111 01346888886652 1345553 6677778884 2211
Q ss_pred CCCchhhHHhhccCCCceEEEEeeEEeeeec
Q 043104 230 AMGEDLFWAIRGGGGASFGVVLAYKIKLVPV 260 (570)
Q Consensus 230 ~~~~DLfwa~rGgggg~fGVVt~~t~kl~p~ 260 (570)
-.|+|...+-..-..=-|||++.|...+.
T Consensus 149 --~~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 149 --ARDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp --HHHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --HHHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 24777665421111224899998876553
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.82 E-value=0.0015 Score=70.41 Aligned_cols=152 Identities=14% Similarity=0.071 Sum_probs=97.0
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCC-ccCCCCeEEEEccC---CccEEEeCCCCeEEEcCCCCHHHH
Q 043104 92 VIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLS-YISDRPFFILDMFN---LRSIDVDVKDESAWVEAGATLGEL 167 (570)
Q Consensus 92 ~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s-~~~~~~gvvIdl~~---l~~i~vd~~~~~v~V~aG~~~~~l 167 (570)
..+.|+|.+|+.++++.. . +.++.+||++....- .....+.++||+++ |+.|+.+ ++.+++|+|+++.+|
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 357899999998887642 2 578889999975320 11112478999988 6788775 446999999999999
Q ss_pred HHHHHhcCC-cC----eecCCCC--CcceeccccccCccCCCcccccchhhcee----EEEEEccCceEeeccCCCchhh
Q 043104 168 YYRIWQKSK-LH----GYPAGVC--PTVGVGGHLSGGGYGNMLRKFGLSTDNVV----DAKIVDVRGRILDRKAMGEDLF 236 (570)
Q Consensus 168 ~~~l~~~g~-~l----~~~~G~~--~~vgvgG~~~gGg~G~~~~~~G~~~D~v~----~~~vV~a~G~iv~~~~~~~DLf 236 (570)
.+.+.+ .. .| ...++.- +..+|||.+..+.+ .|-...-++ .+++..++|+ .+ -.-.|+|
T Consensus 253 ~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~--vp~~dF~ 322 (462)
T 2w3s_A 253 RAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RR--MPLEDFF 322 (462)
T ss_dssp HHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CC--CBGGGGE
T ss_pred HHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EE--EEHHHhh
Confidence 987433 21 11 0111111 23578888877653 244556666 7888888883 22 2235888
Q ss_pred HHhhccCCCceEEEEeeEEeeee
Q 043104 237 WAIRGGGGASFGVVLAYKIKLVP 259 (570)
Q Consensus 237 wa~rGgggg~fGVVt~~t~kl~p 259 (570)
..+|-.--..=-||++++|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 77653211112489999887654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=92.76 E-value=0.13 Score=51.71 Aligned_cols=153 Identities=15% Similarity=0.021 Sum_probs=89.5
Q ss_pred CCccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCC-ccCCCCeEEEEccC---CccEEEeCCCCeEEEcCCCC
Q 043104 88 LKPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLS-YISDRPFFILDMFN---LRSIDVDVKDESAWVEAGAT 163 (570)
Q Consensus 88 ~~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s-~~~~~~gvvIdl~~---l~~i~vd~~~~~v~V~aG~~ 163 (570)
+.|-..++|+|.+|+.++++. +-..++.+||++..-.- .....+..+||+++ |+.|+. +++.+++|+++|
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 345678999999999887753 23467789999942110 01112368999997 456765 456899999999
Q ss_pred HHHHHH--HHHhcCCcCee----cCCC--CCcceeccccccCccCCCcccccchhhcee-------EEEEEccCceEeec
Q 043104 164 LGELYY--RIWQKSKLHGY----PAGV--CPTVGVGGHLSGGGYGNMLRKFGLSTDNVV-------DAKIVDVRGRILDR 228 (570)
Q Consensus 164 ~~~l~~--~l~~~g~~l~~----~~G~--~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~-------~~~vV~a~G~iv~~ 228 (570)
+.+|.+ .+.++-..|.- .++. -+..++||.+..+- ...|... .+++..++|+-.-.
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~vp 147 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSVS 147 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEEE
Confidence 999986 34332111110 0111 13347888886442 1346655 67777788852211
Q ss_pred cCCCchhhHHhhccCCCceEEEEeeEEeee
Q 043104 229 KAMGEDLFWAIRGGGGASFGVVLAYKIKLV 258 (570)
Q Consensus 229 ~~~~~DLfwa~rGgggg~fGVVt~~t~kl~ 258 (570)
-.|+|-..+--.-..=-|||++.|...
T Consensus 148 ---~~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 148 ---ATDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp ---HHHHEEETTEESCCTTCEEEEEEEECC
T ss_pred ---HHHHhcCcccccCCCCCEEEEEEecCC
Confidence 136665443110111247888887644
No 33
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.85 E-value=0.18 Score=50.96 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=52.3
Q ss_pred ccEEEecCCHHHHHHHHHHHHHcCC-eEEEEeCCCCCCCC-CccCCCCeEEEEccCC---ccEEEeCCCCeEEEcCCCCH
Q 043104 90 PTVIITPLQEAHVSAAVICSKQVGF-QLKIRSGGHDYEGL-SYISDRPFFILDMFNL---RSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 90 P~~vv~P~s~~dV~~~V~~a~~~~~-~~~vrggGh~~~g~-s~~~~~~gvvIdl~~l---~~i~vd~~~~~v~V~aG~~~ 164 (570)
|-..++|+|.+|..++++ +++- ..++.+||++.... ......+..+||++++ +.|+. +++.+++|+++|+
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 456789999999876653 4433 46778999996321 1111124789999986 55655 4678999999999
Q ss_pred HHHHH
Q 043104 165 GELYY 169 (570)
Q Consensus 165 ~~l~~ 169 (570)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 34
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=91.75 E-value=0.16 Score=51.58 Aligned_cols=157 Identities=12% Similarity=0.037 Sum_probs=89.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCC-ccCCCCeEEEEccCC---ccEEEeCCCCeEEEcCCCCH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLS-YISDRPFFILDMFNL---RSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s-~~~~~~gvvIdl~~l---~~i~vd~~~~~v~V~aG~~~ 164 (570)
.+...++|+|.+|+.++++. +. ..++.+||++....- .....+..+||++++ +.|+. +++.+++|+++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 45678999999998877643 22 357789999964211 011124689999974 56665 4568999999999
Q ss_pred HHHHHHHHhc----C----C---cC----eecCCC--CCcceeccccccCccCCCcccccchhhcee----EEEEEccCc
Q 043104 165 GELYYRIWQK----S----K---LH----GYPAGV--CPTVGVGGHLSGGGYGNMLRKFGLSTDNVV----DAKIVDVRG 223 (570)
Q Consensus 165 ~~l~~~l~~~----g----~---~l----~~~~G~--~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~----~~~vV~a~G 223 (570)
.++.+.+.+. . . .| ...++. -+..+|||.+..+-. .+-..--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9999876531 0 0 00 001111 124578888866532 111111222 466777888
Q ss_pred eEeeccCCCchhhHHhhccCCCceEEEEeeEEeeee
Q 043104 224 RILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVP 259 (570)
Q Consensus 224 ~iv~~~~~~~DLfwa~rGgggg~fGVVt~~t~kl~p 259 (570)
+-.-. ..+|+|-+.+--....=-|||++.+...+
T Consensus 157 ~R~vp--~~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 157 RRTVP--MDHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEEE--CCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred cEEEE--eehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 42211 11266655432111111389998886543
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=85.20 E-value=0.79 Score=46.78 Aligned_cols=76 Identities=20% Similarity=0.115 Sum_probs=53.4
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCC-CccCCCCeEEEEccCC---ccEEEeCCCCeEEEcCCCCH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGL-SYISDRPFFILDMFNL---RSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~-s~~~~~~gvvIdl~~l---~~i~vd~~~~~v~V~aG~~~ 164 (570)
.|-..+.|+|.+|..++++ +. .-.+..||++.... -.....+..+||++++ +.|+.+. ++.+++|+++|+
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---CC--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 4556899999999988775 22 46788999986321 1111124789999876 5666543 347999999999
Q ss_pred HHHHHH
Q 043104 165 GELYYR 170 (570)
Q Consensus 165 ~~l~~~ 170 (570)
.+|.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999864
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=80.70 E-value=2.2 Score=46.29 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=24.6
Q ss_pred hhhhhccccH-HHHHHhhhhcCcCCcccCCCCCC
Q 043104 504 YGEKYFNGNF-DRLVKVKTMVDPENFFRNEQSIP 536 (570)
Q Consensus 504 ~g~~Yfg~N~-~RL~~IK~kyDP~n~F~~~qsI~ 536 (570)
|...+|+++. +=+++||+.+||+|+|+-..-++
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~ 514 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI 514 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCC
Confidence 3366777654 55599999999999998665444
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=65.45 E-value=2.3 Score=47.53 Aligned_cols=29 Identities=34% Similarity=0.485 Sum_probs=23.4
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCcCCcccC
Q 043104 503 VYGEKYFN-GNFDRLVKVKTMVDPENFFRN 531 (570)
Q Consensus 503 ~~g~~Yfg-~N~~RL~~IK~kyDP~n~F~~ 531 (570)
.|-..+++ ..++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 35455565 479999999999999999974
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=65.41 E-value=4.5 Score=48.92 Aligned_cols=78 Identities=9% Similarity=-0.018 Sum_probs=53.4
Q ss_pred CccEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCC-ccCCCCeEEEEccCC---ccEEEeCCCCeEEEcCCCCH
Q 043104 89 KPTVIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDYEGLS-YISDRPFFILDMFNL---RSIDVDVKDESAWVEAGATL 164 (570)
Q Consensus 89 ~P~~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~~g~s-~~~~~~gvvIdl~~l---~~i~vd~~~~~v~V~aG~~~ 164 (570)
.+...++|+|.+|+.++++. +. .-++.+||++..-.- .......++||++++ +.|+. +++.+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEE--eCCEEEEEecChH
Confidence 35568999999998876543 21 246778999853111 111123689999975 55665 4567999999999
Q ss_pred HHHHHHHH
Q 043104 165 GELYYRIW 172 (570)
Q Consensus 165 ~~l~~~l~ 172 (570)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988664
No 39
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=44.59 E-value=13 Score=40.43 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=21.6
Q ss_pred ccHHHHHHhhhhcCcCCcccCCCCCC
Q 043104 511 GNFDRLVKVKTMVDPENFFRNEQSIP 536 (570)
Q Consensus 511 ~N~~RL~~IK~kyDP~n~F~~~qsI~ 536 (570)
..++-+++||+.+||+|+|+-..-++
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred HHHHHHHHHHHHcCccCCCCCCcccc
Confidence 46888999999999999998765554
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=37.87 E-value=18 Score=39.62 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=22.3
Q ss_pred HHHhhhhcCcCCcccCCCCCCCCCCCC
Q 043104 516 LVKVKTMVDPENFFRNEQSIPTQPRSD 542 (570)
Q Consensus 516 L~~IK~kyDP~n~F~~~qsI~~~~~~~ 542 (570)
|++||+.+||+|+|+-..-+.|..+.|
T Consensus 541 m~~iK~~~DP~~ilNPGk~~t~~~~~~ 567 (571)
T 1f0x_A 541 LQKFYRENDPTNSMNPGIGKTSKRKNW 567 (571)
T ss_dssp HHHHHHHHCTTCCBSTTTTTCCCSSCC
T ss_pred HHHHHHHhCCCCCCCCCcCcCCccccc
Confidence 999999999999999877777654444
No 41
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=37.69 E-value=39 Score=28.91 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=34.6
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGHD 124 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh~ 124 (570)
+|.. ...|..|+.+.+++|+.++.+-|++.|++. .++-.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 3643 357999999999999999999999999996 56667763
No 42
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=35.13 E-value=15 Score=40.13 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=21.2
Q ss_pred ccHHHHHHhhhhcCcCCcccCCC
Q 043104 511 GNFDRLVKVKTMVDPENFFRNEQ 533 (570)
Q Consensus 511 ~N~~RL~~IK~kyDP~n~F~~~q 533 (570)
.++++.+++++++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 79999999999999999998764
No 43
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=31.65 E-value=18 Score=38.61 Aligned_cols=29 Identities=10% Similarity=0.193 Sum_probs=23.4
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCcCCcccC
Q 043104 503 VYGEKYFN-GNFDRLVKVKTMVDPENFFRN 531 (570)
Q Consensus 503 ~~g~~Yfg-~N~~RL~~IK~kyDP~n~F~~ 531 (570)
.|-..+++ +.++-+++||+.+||+|+++-
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 45555565 579999999999999999863
No 44
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=27.26 E-value=90 Score=26.67 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=32.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 043104 87 TLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGHD 124 (570)
Q Consensus 87 ~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh~ 124 (570)
...|..|+++.+++|+.++.+-|++.|+|. .++-.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 457999999999999999999999999996 56667774
No 45
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=26.98 E-value=31 Score=41.69 Aligned_cols=76 Identities=9% Similarity=0.044 Sum_probs=48.8
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCC--C-CCCccCCCCeEEEEccCCccE-EEeCCCCeEEEcCCCCHHHH
Q 043104 92 VIITPLQEAHVSAAVICSKQVGFQLKIRSGGHDY--E-GLSYISDRPFFILDMFNLRSI-DVDVKDESAWVEAGATLGEL 167 (570)
Q Consensus 92 ~vv~P~s~~dV~~~V~~a~~~~~~~~vrggGh~~--~-g~s~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~~~~l 167 (570)
..+.|.|.+|+.++..- .-+-+ +..|+++. . ..-.. .-.++||+.+.... .+..++..+++|+++++.++
T Consensus 242 ~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~--~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDV--SYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp EEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CC--CCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred eEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCC--CCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 46899999999876432 12333 34466653 1 11111 12689998875543 34456678999999999999
Q ss_pred HHHHHh
Q 043104 168 YYRIWQ 173 (570)
Q Consensus 168 ~~~l~~ 173 (570)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=26.21 E-value=71 Score=27.51 Aligned_cols=42 Identities=7% Similarity=0.082 Sum_probs=34.4
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGHD 124 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh~ 124 (570)
+|.. ...+..|+.+.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4643 347899999999999999999999999996 56667765
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=25.21 E-value=91 Score=26.42 Aligned_cols=38 Identities=5% Similarity=0.071 Sum_probs=32.6
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 043104 87 TLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGHD 124 (570)
Q Consensus 87 ~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh~ 124 (570)
...|..|+.+.+++++.++.+-|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 457999999999999999999999999996 55666664
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=24.93 E-value=96 Score=26.19 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=31.0
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 043104 87 TLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGHD 124 (570)
Q Consensus 87 ~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh~ 124 (570)
...|..|+++.+++|+.++.+-|++.|+|. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 457999999999999999999999999986 45555553
No 49
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=23.06 E-value=28 Score=37.85 Aligned_cols=23 Identities=22% Similarity=0.353 Sum_probs=21.1
Q ss_pred cccHHHHHHhhhhcCcCCcccCC
Q 043104 510 NGNFDRLVKVKTMVDPENFFRNE 532 (570)
Q Consensus 510 g~N~~RL~~IK~kyDP~n~F~~~ 532 (570)
++|++.-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 57999999999999999999874
No 50
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.06 E-value=1.6e+02 Score=23.38 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=24.7
Q ss_pred cEEEeCCCCeEEEcCCCCHHHHHHHHHhcCCc
Q 043104 146 SIDVDVKDESAWVEAGATLGELYYRIWQKSKL 177 (570)
Q Consensus 146 ~i~vd~~~~~v~V~aG~~~~~l~~~l~~~g~~ 177 (570)
.+++|...++++|..-+...++.+.+.+.|+.
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~ 79 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQ 79 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSC
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCc
Confidence 45667777788887667889999999888754
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=20.72 E-value=1.4e+02 Score=25.26 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=33.2
Q ss_pred ccCCCCCCCccEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCC
Q 043104 81 RFNLSSTLKPTVIITPLQEAHVSAAVICSKQVGFQL-KIRSGGH 123 (570)
Q Consensus 81 r~~~~~~~~P~~vv~P~s~~dV~~~V~~a~~~~~~~-~vrggGh 123 (570)
+|.. ...|..+++..+++++.++.+-|++.|++. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3643 345999999999999999999999999985 5566665
No 52
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=20.19 E-value=32 Score=27.67 Aligned_cols=17 Identities=35% Similarity=0.626 Sum_probs=14.3
Q ss_pred hhc-cccHHHHHHhhhhc
Q 043104 507 KYF-NGNFDRLVKVKTMV 523 (570)
Q Consensus 507 ~Yf-g~N~~RL~~IK~ky 523 (570)
++| .+|++||.++|+++
T Consensus 22 K~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 22 KFFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GGCCHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHh
Confidence 345 68999999999887
Done!