Query 043107
Match_columns 240
No_of_seqs 194 out of 1696
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 22:50:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.2E-42 4E-47 318.3 23.4 227 2-235 283-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2E-41 6.9E-46 309.1 22.6 224 2-234 266-495 (495)
3 3rja_A Carbohydrate oxidase; p 100.0 1.7E-35 5.8E-40 269.2 18.9 207 3-234 257-473 (473)
4 3pop_A GILR oxidase; FAD bindi 100.0 8E-35 2.7E-39 266.1 17.7 209 3-232 281-501 (501)
5 3tsh_A Pollen allergen PHL P 4 100.0 1.1E-31 3.9E-36 245.9 19.4 225 3-234 271-497 (500)
6 2y3s_A TAML; oxidoreductase; H 100.0 9E-30 3.1E-34 234.4 16.9 210 3-233 307-528 (530)
7 2wdx_A Putative hexose oxidase 100.0 8.7E-30 3E-34 234.2 14.9 205 2-232 308-523 (523)
8 2ipi_A Aclacinomycin oxidoredu 100.0 3.8E-29 1.3E-33 229.9 18.5 207 3-233 303-520 (521)
9 1zr6_A Glucooligosaccharide ox 100.0 1.1E-27 3.7E-32 219.5 17.0 208 3-234 259-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 99.9 1E-24 3.4E-29 197.9 11.4 196 3-232 257-456 (459)
11 1w1o_A Cytokinin dehydrogenase 98.3 1.1E-06 3.7E-11 80.9 6.9 87 123-231 446-533 (534)
12 2vfr_A Xylitol oxidase, aldito 95.2 0.032 1.1E-06 49.3 6.3 60 149-227 355-414 (422)
13 2exr_A Cytokinin dehydrogenase 95.0 0.014 4.6E-07 53.4 3.5 34 198-232 488-521 (524)
14 1wvf_A 4-cresol dehydrogenase 93.8 0.1 3.4E-06 47.5 6.5 30 199-228 481-511 (520)
15 4bby_A Alkyldihydroxyacetoneph 92.1 0.5 1.7E-05 44.2 8.6 28 199-226 626-654 (658)
16 4feh_A Oxidoreductase DPRE1; a 89.9 3 0.0001 37.4 11.2 115 77-227 359-473 (481)
17 1e8g_A Vanillyl-alcohol oxidas 76.1 2.3 7.7E-05 38.9 4.2 25 206-230 523-547 (560)
18 2i0k_A Oxidoreductase; MIX alp 75.1 1.5 5.3E-05 40.1 2.8 22 206-227 533-554 (561)
19 3pm9_A Putative oxidoreductase 74.3 1.8 6.3E-05 38.7 3.0 30 197-226 442-472 (476)
20 1f0x_A DLDH, D-lactate dehydro 72.8 1.8 6.1E-05 39.8 2.6 28 204-232 535-562 (571)
21 3js8_A Cholesterol oxidase; ch 66.6 2.9 9.9E-05 38.1 2.6 23 205-227 511-533 (540)
22 2uuu_A Alkyldihydroxyacetoneph 61.6 3.6 0.00012 37.8 2.3 28 199-226 552-580 (584)
23 2gvs_A Chemosensory protein CS 43.6 9.6 0.00033 26.9 1.5 14 212-225 84-97 (109)
24 1k19_A Chemosensory protein CS 36.3 15 0.00051 26.0 1.6 14 212-225 82-95 (112)
25 3owt_C Regulatory protein SIR3 34.2 19 0.00064 17.9 1.3 13 207-219 10-22 (27)
26 2kxh_B Peptide of FAR upstream 28.3 47 0.0016 17.5 2.3 19 204-222 10-28 (31)
27 1xg8_A Hypothetical protein SA 22.2 35 0.0012 23.8 1.4 20 206-226 30-50 (111)
28 3fbi_A Mediator of RNA polymer 22.0 37 0.0013 22.7 1.4 14 205-218 26-39 (84)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.2e-42 Score=318.26 Aligned_cols=227 Identities=46% Similarity=0.900 Sum_probs=190.8
Q ss_pred EEEEEEEEecChhchHHhhhhhcCCCCCCCCCceEcCHHHHHHHHhCCCCC-CC---cccccccCCCcccc-cccccccC
Q 043107 2 VSVFTALFLGGVDRLLPLMQDSFPELGLTRKDCREMTFVESIVYLDGYEVE-EP---INVDVLLGRDFHVR-FFRGKVDY 76 (240)
Q Consensus 2 ~~~~~g~~~G~~~e~~~~l~pl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~-~~~~~s~~ 76 (240)
.+.+.++|+|+++++.++|+++|+++|+....++++||++++.++++++.+ .+ + +.+.++.+.+. +|+.||.+
T Consensus 283 ~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~k~ks~~ 360 (518)
T 3vte_A 283 HGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKK--EILLDRSAGKKTAFSIKLDY 360 (518)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CG--GGGGCTTCSCCBEEEEEEEE
T ss_pred EEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchh--hhhccCCcCcccceeeechh
Confidence 467889999999999999999888888777788999999998888765433 33 3 45555544444 56889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHH
Q 043107 77 LTEPIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLK 156 (240)
Q Consensus 77 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 156 (240)
+.++|++++++.+++++.+.+. ..+.++|+++||+|++|++++|||+||+++.|.+++.+.|.+++ .+++.++|++
T Consensus 361 ~~~~l~~~~i~~l~~~~~~~~~-~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~---~~~~~~~w~~ 436 (518)
T 3vte_A 361 VKKPIPETAMVKILEKLYEEDV-GAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQE---DNEKHINWVR 436 (518)
T ss_dssp ESSCCCHHHHHHHHHGGGGSCT-TTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTT---THHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHhCCC-CCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCCcc---hhHHHHHHHH
Confidence 9888999999999998887542 25789999999999999999999999993499999999998765 5788999999
Q ss_pred HHHHhhcccccCCCCcccccccCCCCC-CCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCCCCCC
Q 043107 157 KLFNYMTPYVAKNPRTAYINYRDLDVG-TNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFNL 235 (240)
Q Consensus 157 ~~~~~l~~~~~~~~~~~Y~Ny~d~~~~-~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~~~~~ 235 (240)
++++.|.|+.+++++++|+||+|.+++ .+. .+||+++.+..|++.|||+||+||++||+||||+|||+++|+|+|...
T Consensus 437 ~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~-~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 437 SVYNFTTPYVSQNPRLAYLNYRDLDLGKTNH-ASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHTGGGSCCTTCCCCTTSCCGGGCCCCT-TSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhccccCCCCccccccCCCcccccccc-ccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999998765668999999998776 321 347888888899999999999999999999999999999999998754
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2e-41 Score=309.12 Aligned_cols=224 Identities=34% Similarity=0.644 Sum_probs=186.1
Q ss_pred EEEEEEEEecChhchHHhhhhhcCCCCCCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcc-c-ccccccccCCCC
Q 043107 2 VSVFTALFLGGVDRLLPLMQDSFPELGLTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFH-V-RFFRGKVDYLTE 79 (240)
Q Consensus 2 ~~~~~g~~~G~~~e~~~~l~pl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~s~~~~~ 79 (240)
.+.+.++|+|+++++.+.|+++++++|+....+++|||++++.+++++.. + +.+.++.+. + .+|+.||.++.+
T Consensus 266 ~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~--~~l~~~~~~~~~~~~~~ks~~~~~ 340 (495)
T 3fw9_A 266 WLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---V--SQLNNRFLKFDERAFKTKVDLTKE 340 (495)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---G--GGGGCTTSCSCCCEEEEEEEECSS
T ss_pred EEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---h--hhhcCCCCCccCcceeEeehhhcC
Confidence 46788999999999999999987888877778999999999888765432 1 334444332 2 378899999998
Q ss_pred CCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHHHHH
Q 043107 80 PIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLKKLF 159 (240)
Q Consensus 80 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 159 (240)
+|++++++.|++++.+.+ .+.++++++||+|++|++++|||+||+++.|.+++.+.|.++++ +.+++.++|+++++
T Consensus 341 ~l~~~~i~~l~~~~~~~~---~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~-~~~~~~~~w~~~~~ 416 (495)
T 3fw9_A 341 PLPSKAFYGLLERLSKEP---NGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQ-KKKTEFLDWLEKVY 416 (495)
T ss_dssp CCCHHHHHHHHHHHHHCT---TEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGG-GGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhCC---CcEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCc-chhHHHHHHHHHHH
Confidence 999999999999988765 46789999999999999999999999845899999999976421 25788899999999
Q ss_pred HhhcccccCCCCcccccccCCCCCCCCC----CCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCCCCC
Q 043107 160 NYMTPYVAKNPRTAYINYRDLDVGTNNK----LGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFN 234 (240)
Q Consensus 160 ~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~----~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~~~~ 234 (240)
+.|.|+.+++++++|+||+|.+++.+.. .+|++|+.++.|++.|||+||+||++||+||||+|+|+++|+|+|++
T Consensus 417 ~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 417 EFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp HHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 9999997656678999999987752110 02577777888999999999999999999999999999999999864
No 3
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.7e-35 Score=269.16 Aligned_cols=207 Identities=20% Similarity=0.346 Sum_probs=161.9
Q ss_pred EEEEEEEecChhchHHhhhhhcCCCCC--CCCCce-EcCHHHHHHHHhCCCCCCCcccccccCCCcccccccccccCCCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPELGL--TRKDCR-EMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRGKVDYLTE 79 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~lg~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 79 (240)
+.+.++|+|++++++++++||+. +++ ....++ ++||++++..++++. +. |.... ..+.+++.||.++.
T Consensus 257 ~~~~~~~~G~~~~~~~~l~pl~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~--~~~~~~~~ks~~~~- 327 (473)
T 3rja_A 257 PGIEGLYYGTPEQWRAAFQPLLD-TLPAGYVVNPTTSLNWIESVLSYSNFD---HV--DFITP--QPVENFYAKSLTLK- 327 (473)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHT-TSCTTCEECCCEEECHHHHHHHTSSSS---CC--CCSSC--CCCBEEEEEEEEES-
T ss_pred EEEEEEecCCHHHHHHHHHHHHH-hCCCCcceeeecccCHHHHHHhhhcCC---Cc--ccccC--CCCCcceEeccccC-
Confidence 46889999999999999999864 554 456788 999999977665321 22 21111 01236788998875
Q ss_pred CCCHHHHHHHHHHHHhcCCC---CceEEEEEecCc---cccccCCCCCCCcCCCCceEEEEEEeEeCC-CCCchhHHHHH
Q 043107 80 PIPEEAFQGIYDIFLEQDQE---TNGVLMFFPYGG---KISEISESEIPYPHRAGNIYTLLYYAGWDL-ESTDDTYQRHD 152 (240)
Q Consensus 80 ~l~~~~~~~l~~~~~~~~~~---~~~~~~~~~~gG---av~~v~~~~tAf~hR~~~~~~~~~~~~w~~-~~~~~~~~~~~ 152 (240)
++++++++.+++++.+..+. ..+.++++++|| +++++++++|||+||+ +.|++++.+.|.+ +. .+++..
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~---~~~~~~ 403 (473)
T 3rja_A 328 SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KLWLIQFYDRYDNNQT---YPETSF 403 (473)
T ss_dssp CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CSEEEEEEEEECTTSC---CCTTTH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-ccEEEEEEEEeCCCCc---cchHHH
Confidence 49999999999998653211 345688999998 7888999999999999 8999999999964 33 245567
Q ss_pred HHHHHHHHhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCCC
Q 043107 153 NMLKKLFNYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 232 (240)
Q Consensus 153 ~~~~~~~~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~~ 232 (240)
+|++++++.+.+..+....++|+||+|.+++. ..|.+.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~------------~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p 471 (473)
T 3rja_A 404 KFLDGWVNSVTKALPKSDWGMYINYADPRMDR------------DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRP 471 (473)
T ss_dssp HHHHHHHHHHHTTSCGGGEECCGGGCCCSSCH------------HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCC
T ss_pred HHHHHHHHHHHhhCCCCCCceEecCCCccccc------------hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCC
Confidence 89988888887665434468999999988751 349999999999999999999999999999999998
Q ss_pred CC
Q 043107 233 FN 234 (240)
Q Consensus 233 ~~ 234 (240)
.+
T Consensus 472 ~~ 473 (473)
T 3rja_A 472 VK 473 (473)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 4
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=8e-35 Score=266.11 Aligned_cols=209 Identities=20% Similarity=0.271 Sum_probs=163.7
Q ss_pred EEEEEEEecChhchHHhhhhhcCC----CC--CCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccccccccccC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPE----LG--LTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRGKVDY 76 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~----lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 76 (240)
+.+.++|.|+.++++++++||+.. +| |... ++++||+++...+. .+.+.+ . ...+++.||.+
T Consensus 281 ~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~-~~~~~~----~------~~~~~~~ks~~ 348 (501)
T 3pop_A 281 LQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR-GGVMSWLTGTRYMS-QADCGD----V------MGARSASKSAY 348 (501)
T ss_dssp EEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-EEEEEHHHHHHHTC-BCSCGG----G------TTCEEEEEEEE
T ss_pred EEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-eEEeCHHHHHhhhc-CCCCCc----c------cccccceeccc
Confidence 456778899999999999998643 23 3334 88999999866532 111111 0 01267889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHH
Q 043107 77 LTEPIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLK 156 (240)
Q Consensus 77 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 156 (240)
+.+++++++++.+++++....+.+.+.++++++||+|+++++++|||+||+ +.|++++...|.+++ .+++.++|++
T Consensus 349 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~---~~~~~~~w~~ 424 (501)
T 3pop_A 349 HRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAE---LDELHLGWLR 424 (501)
T ss_dssp ESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGG---GHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCcc---hHHHHHHHHH
Confidence 988899999999999887642234678899999999999999999999999 899999999998665 5788999999
Q ss_pred HHHHhhccccc------CCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCC
Q 043107 157 KLFNYMTPYVA------KNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSI 230 (240)
Q Consensus 157 ~~~~~l~~~~~------~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I 230 (240)
++++.|.+..+ +..+++|+||+|.+++.+ +.+|+ ...|++.|||+||+||++||+||||+|+|+++|+|
T Consensus 425 ~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~--~~~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI 499 (501)
T 3pop_A 425 GLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDP--ARNRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSI 499 (501)
T ss_dssp HHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCT--TTCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCC
T ss_pred HHHHHHHHhhcCCCCcCCCCCceeccCCCcccccc--ccccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCC
Confidence 99999986642 124789999999876521 11222 23499999999999999999999999999999999
Q ss_pred CC
Q 043107 231 PP 232 (240)
Q Consensus 231 ~~ 232 (240)
+|
T Consensus 500 ~p 501 (501)
T 3pop_A 500 GL 501 (501)
T ss_dssp CC
T ss_pred CC
Confidence 87
No 5
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.98 E-value=1.1e-31 Score=245.86 Aligned_cols=225 Identities=40% Similarity=0.758 Sum_probs=172.6
Q ss_pred EEEEEEEecChhchHHhhhhhcCCCCCCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccc-cccccccCCCCCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPELGLTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVR-FFRGKVDYLTEPI 81 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~l 81 (240)
+.+.++|.|+.+++..++.+++..++.....+.+++|.+....+......... +.+.++..... ....++.++.+++
T Consensus 271 ~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (500)
T 3tsh_A 271 ATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALE--DDLLNRQNSFKPFAEYKSDYVYQPF 348 (500)
T ss_dssp EEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHH--HHHHCCCCCCCCEEEEEEEEECSCC
T ss_pred cEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccccccc--cccccccccccchhhhhhhhhcccC
Confidence 56788999999999999999888888777778889998876554322211111 11222222222 3455677777779
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHHHHHHh
Q 043107 82 PEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLKKLFNY 161 (240)
Q Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 161 (240)
+.+.++.+++.+...+ ..+.++++.+||++++++.++|||+||++..|.+++...|.++++ +++..+|++++++.
T Consensus 349 ~~~~~~~~~~~~~~~~--~~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~~---~~~~~~~~~~~~~~ 423 (500)
T 3tsh_A 349 PKTVWEQILNTWLVKP--GAGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGA---AAAPLSWSKDIYNY 423 (500)
T ss_dssp CHHHHHHHHHTGGGST--TCCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTTC---CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhcCC--CceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcch---hHHHHHHHHHHHHH
Confidence 9998888887665554 245677889999999999999999999856788999999998874 78889999999999
Q ss_pred hcccccCCCCcccccccCCCCCCCCC-CCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCCCCC
Q 043107 162 MTPYVAKNPRTAYINYRDLDVGTNNK-LGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFN 234 (240)
Q Consensus 162 l~~~~~~~~~~~Y~Ny~d~~~~~~~~-~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~~~~ 234 (240)
|.++..+.++++|+||+|.+++.+.. .....+...+.|++.|||+||+||++||+||||+|+|+++|+|+|+-
T Consensus 424 ~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 424 MEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp HGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred HHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 99987766778999999987753211 11234455678999999999999999999999999999999999863
No 6
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.97 E-value=9e-30 Score=234.37 Aligned_cols=210 Identities=20% Similarity=0.352 Sum_probs=158.9
Q ss_pred EEEEEEEecChhchHHhhhhhcCC----CC-CCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccccccccccCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPE----LG-LTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRGKVDYL 77 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~----lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 77 (240)
+.+.++|.|+.++++++++||+.. ++ +....++.+||.++...+..... +. .+.+++.++.++
T Consensus 307 ~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~r~~~~s~~~ 374 (530)
T 2y3s_A 307 LAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGD----------GD--MTGRAKIKAAYA 374 (530)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCC----------CC--CCSEEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCC----------Cc--ccccceeecccc
Confidence 456778999999999999986532 35 33456778999886443221000 00 012567788888
Q ss_pred CCCCCHHHHHHHHHHHHhcC-CCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHH
Q 043107 78 TEPIPEEAFQGIYDIFLEQD-QETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLK 156 (240)
Q Consensus 78 ~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 156 (240)
.++++++.++.+++.+...+ +...+.+.++++||++++++.++|||+||+ +.+++++.+.|.++. .+++..+|++
T Consensus 375 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~---~~~~~~~w~~ 450 (530)
T 2y3s_A 375 RRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPA---QDPVHVRWIR 450 (530)
T ss_dssp SSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTT---CHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCCc---chHHHHHHHH
Confidence 76799999999999987643 123567889999999999999999999999 899999999998776 4788899999
Q ss_pred HHHHhhcccccC------CCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCC
Q 043107 157 KLFNYMTPYVAK------NPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSI 230 (240)
Q Consensus 157 ~~~~~l~~~~~~------~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I 230 (240)
++++.|.+.... ...++|+||+|.+++.+ +.||++. .|.+.|||+||+||++||+||||+|||+++|+|
T Consensus 451 ~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~--~~~~s~~---~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I 525 (530)
T 2y3s_A 451 ELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADE--EWNTSGV---PWSELYYKDAYPRLQAVKARWDPRNVFRHALSV 525 (530)
T ss_dssp HHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCT--TTCCSSC---CHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCC
T ss_pred HHHHHHHhhhcCCCcccCCCCceEeCCcCcccccc--ccccchh---HHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCC
Confidence 999999743211 13579999999876421 1123322 388999999999999999999999999999999
Q ss_pred CCC
Q 043107 231 PPF 233 (240)
Q Consensus 231 ~~~ 233 (240)
+|.
T Consensus 526 ~p~ 528 (530)
T 2y3s_A 526 RVP 528 (530)
T ss_dssp CCC
T ss_pred CCC
Confidence 975
No 7
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.96 E-value=8.7e-30 Score=234.22 Aligned_cols=205 Identities=23% Similarity=0.346 Sum_probs=155.1
Q ss_pred EEEEEEEEecChhchHHhhhhhcCC----CC-CCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccccccccccC
Q 043107 2 VSVFTALFLGGVDRLLPLMQDSFPE----LG-LTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRGKVDY 76 (240)
Q Consensus 2 ~~~~~g~~~G~~~e~~~~l~pl~~~----lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 76 (240)
.+.+.++|.|+.++++++++|++.. ++ +....+..++|.+....+. . ..+ +++.++.+
T Consensus 308 ~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--~~~-~~~~~s~~ 370 (523)
T 2wdx_A 308 GFMMPIQVDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRG--------------G--RGP-ASKTKAGY 370 (523)
T ss_dssp SEEEEEEEETTSTTHHHHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCC--------------S--SCC-EEEEEEEE
T ss_pred eEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccccceeccHHHHHHhhc--------------C--CCC-ceeeeccc
Confidence 3567788999999999999886542 34 3345667788876422110 0 011 55667888
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHH
Q 043107 77 LTEPIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLK 156 (240)
Q Consensus 77 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 156 (240)
+.++++++.++.+++.+........+.++++.+||++++++.++|||+||+ +.|++++...|.++. .++...+|++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~---~~~~~~~~~~ 446 (523)
T 2wdx_A 371 LRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPG---NEAKHLTWVR 446 (523)
T ss_dssp ESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGG---GHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCc---cHHHHHHHHH
Confidence 776699999999999887543234567889999999999999999999999 899999999998765 4788899999
Q ss_pred HHHHhhccccc------CCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCC
Q 043107 157 KLFNYMTPYVA------KNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSI 230 (240)
Q Consensus 157 ~~~~~l~~~~~------~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I 230 (240)
++++.|.+... ....++|+||+|.+++.+ +.||++. .|.+.|||+||+||++||+||||+|||+++|+|
T Consensus 447 ~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~--~~~~s~~---~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI 521 (523)
T 2wdx_A 447 KLYADVYAETGGVPVPNDVSDGAYINYPDSDLADP--GLNTSGV---PWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSI 521 (523)
T ss_dssp HHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCT--TTCCSSC---CHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCC
T ss_pred HHHHHHHhhhcCCCccCCCCCcceecCCccccccc--ccccchh---HHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCC
Confidence 99999973221 113579999999876411 1122222 288999999999999999999999999999999
Q ss_pred CC
Q 043107 231 PP 232 (240)
Q Consensus 231 ~~ 232 (240)
+|
T Consensus 522 ~p 523 (523)
T 2wdx_A 522 RP 523 (523)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 8
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.96 E-value=3.8e-29 Score=229.93 Aligned_cols=207 Identities=20% Similarity=0.325 Sum_probs=156.9
Q ss_pred EEEEEEEecChhchHHhhhhhcCC----CC-CCCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccccccccccCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPE----LG-LTRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRGKVDYL 77 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~----lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 77 (240)
+.+.++|.|+.++++++++|++.. ++ +....+..++|.+....+.. .+ +...+++.++.++
T Consensus 303 ~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~~s~~~ 368 (521)
T 2ipi_A 303 ILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKF----DT----------GGFDRTKSKGAYL 368 (521)
T ss_dssp EEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCC----CC----------TTCCEEEEEEEEE
T ss_pred eEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcC----CC----------CCCccceeecccc
Confidence 456778999999999999886432 34 33456678999987443211 00 1112456678887
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHHH
Q 043107 78 TEPIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLKK 157 (240)
Q Consensus 78 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 157 (240)
.++++++.++.+++.+...+ ...+.+.++++||++++++.++|||+||+ +.+.+++.+.|.++. .++...+|+++
T Consensus 369 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~---~~~~~~~~~~~ 443 (521)
T 2ipi_A 369 RKPWTAAQAATLYRHLSADS-QVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPA---HDDANLAWIRE 443 (521)
T ss_dssp SSCCCHHHHHHHHHHHHSCC-SSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGG---GHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHhCC-CCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCC---chHHHHHHHHH
Confidence 76699999999999988653 34677889999999999999999999999 899999999998765 47888999999
Q ss_pred HHHhhcccccC------CCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCC
Q 043107 158 LFNYMTPYVAK------NPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIP 231 (240)
Q Consensus 158 ~~~~l~~~~~~------~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~ 231 (240)
+++.|.+...+ ...++|+||+|.+++.+ +.+++. ..|.+.|||+||+||++||+||||+|||++.|+|+
T Consensus 444 ~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~--~~~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~ 518 (521)
T 2ipi_A 444 IYREIFATTGGVPVPDDRTEGTFINYPDVDLVDE--RWNTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVR 518 (521)
T ss_dssp HHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCT--TTSCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCC
T ss_pred HHHHHHhhhcCCCcccCCCCceEeCCCCcccccc--ccccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCC
Confidence 99999743211 13579999999876410 011111 13889999999999999999999999999999998
Q ss_pred CC
Q 043107 232 PF 233 (240)
Q Consensus 232 ~~ 233 (240)
|.
T Consensus 519 p~ 520 (521)
T 2ipi_A 519 PP 520 (521)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.95 E-value=1.1e-27 Score=219.45 Aligned_cols=208 Identities=18% Similarity=0.291 Sum_probs=152.7
Q ss_pred EEEEEEEecChhchHHhhhhhcCCCCCC--CCCceEcCHHHHHHHHhCCCCCCCcccccccCCCccc-ccccccccCCCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPELGLT--RKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHV-RFFRGKVDYLTE 79 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~ 79 (240)
+.+.++|+|+.++++++++||+..++.. ...+..++|.+....+.+. .+. .. ...++. ..++.++.++.+
T Consensus 259 ~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~-~~p~g~~~~~~~~s~~~~~ 331 (503)
T 1zr6_A 259 LNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYG---ADL---NI-TYNYDVHEYFYANSLTAPR 331 (503)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCTT---CCS---SC-SSCCCCCBCEEEEEEEESS
T ss_pred EEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcCC---Ccc---cc-cCCCCccccceecccchhh
Confidence 5677899999999999999986545442 3456778998764433210 000 00 000111 257778888887
Q ss_pred CCCHHHHHHHHHHHH-hcCCC--CceEEEEEecCc---cccccCCCCCCCcCCCCceEEEEEEeEe-----CCCCCchhH
Q 043107 80 PIPEEAFQGIYDIFL-EQDQE--TNGVLMFFPYGG---KISEISESEIPYPHRAGNIYTLLYYAGW-----DLESTDDTY 148 (240)
Q Consensus 80 ~l~~~~~~~l~~~~~-~~~~~--~~~~~~~~~~gG---av~~v~~~~tAf~hR~~~~~~~~~~~~w-----~~~~~~~~~ 148 (240)
++++.++.+++.+. ..+.. ..+.+.++++|| ++++++.++|+|+||+ +.+++++...| .++. .+
T Consensus 332 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~---~~ 406 (503)
T 1zr6_A 332 -LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSP---YP 406 (503)
T ss_dssp -CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTT---TT
T ss_pred -CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeEEEEEeeeccccCCCcc---ch
Confidence 99999999999987 54322 235678899999 8999999999999999 89998887776 3332 24
Q ss_pred HHHHHHHHHHHHhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCCC
Q 043107 149 QRHDNMLKKLFNYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQ 228 (240)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~ 228 (240)
+...+|++++++.+.........++|+||+|.+++. ..|.+.|||+||+||++||+||||+|||+++|
T Consensus 407 ~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~------------~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~ 474 (503)
T 1zr6_A 407 ESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTK------------EEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVV 474 (503)
T ss_dssp TSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCH------------HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTT
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCceeccCCCccccc------------chHHHHHHHhHHHHHHHHHHHhCchhhcCCCC
Confidence 455688888887776554311247999999987651 24889999999999999999999999999999
Q ss_pred CCCCCC
Q 043107 229 SIPPFN 234 (240)
Q Consensus 229 ~I~~~~ 234 (240)
+|++..
T Consensus 475 ~i~~~~ 480 (503)
T 1zr6_A 475 SVEPIA 480 (503)
T ss_dssp SCCCCC
T ss_pred CCCchh
Confidence 999864
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.91 E-value=1e-24 Score=197.86 Aligned_cols=196 Identities=18% Similarity=0.171 Sum_probs=142.0
Q ss_pred EEEEEEEecChhchHHhhhhhcCCCCC-CCCCceEcCHHHHHHHHhCCCCCCCcccccccCCCcccccccc-cccCCCCC
Q 043107 3 SVFTALFLGGVDRLLPLMQDSFPELGL-TRKDCREMTFVESIVYLDGYEVEEPINVDVLLGRDFHVRFFRG-KVDYLTEP 80 (240)
Q Consensus 3 ~~~~g~~~G~~~e~~~~l~pl~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~ 80 (240)
+.+.++|.|+.++++++++++. ++++ ....+..++|.++...... . +... .....+.. ++.++.++
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~---~~~~~~~~~~s~~~~~~ 324 (459)
T 2bvf_A 257 VTVCVGHLGGLDIAERDIARLR-GLGRTVSDSIAVRSYDEVVALNAE------V--GSFE---DGMSNLWIDREIAMPNA 324 (459)
T ss_dssp EEEEEECCSCHHHHHHHHHHHH-TTSCCSEECCEEECHHHHHHHHHH------H--SCCC---CSCEEEEEEEEECSCHH
T ss_pred EEEEEEEeCCHHHHHHHHHHHH-HhCcchhcceeecCHHHHHhcccc------c--ccCC---CCCcceEeccccccCCC
Confidence 4566789999999999999984 5664 3456788999986543110 0 0100 11123333 78887644
Q ss_pred CCHHHHHHHHHHHHhcCCCC-ceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHHHHH
Q 043107 81 IPEEAFQGIYDIFLEQDQET-NGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLKKLF 159 (240)
Q Consensus 81 l~~~~~~~l~~~~~~~~~~~-~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 159 (240)
+++++++.+++.+.+.+... .+.+++ +||++.+ .+.|||+||+ ..| +++...|.++.. .++...+|++++.
T Consensus 325 ~~~~~~~~l~~~~~~~~~~~~~~~~~~--~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~~~~--~~~~~~~~~~~~~ 396 (459)
T 2bvf_A 325 RFAEAIAGNLDKFVSEPASGGSVKLEI--EGMPFGN--PKRTPARHRD-AMG-VLALAEWSGAAP--GSEKYPELARELD 396 (459)
T ss_dssp HHHHHHHTTGGGCEEETTTTEEEEEEE--ECCCCCC--TTCCSSCCCS-SCE-EEEEEEECTTST--TTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCceeEEEE--eCCccCC--CCCCCcccCC-cce-EEEEEEeCCCcc--chHHHHHHHHHHH
Confidence 77888888888776543112 233443 3888776 6789999999 788 889999987651 2566789999999
Q ss_pred HhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhh-HHHHHHHHhhcCcCCCCCCCCCCCC
Q 043107 160 NYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNN-FYRLVHVKTMVDPENFFRNEQSIPP 232 (240)
Q Consensus 160 ~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n-~~RL~~iK~kyDP~nvF~~~~~I~~ 232 (240)
+.|.++......|.|+||+|.+.+ .|...|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 397 ~~l~~~~~~p~~g~Y~N~~d~~~~--------------~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 397 AALLRAGVTTSGFGLLNNNSEVTA--------------EMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHHTTCEEEEECCGGGCSSCCH--------------HHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred HHhcccccCCCCCeeeCCCCCcch--------------HHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 999988631125789999987633 3889999987 9999999999999999999999987
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=98.28 E-value=1.1e-06 Score=80.86 Aligned_cols=87 Identities=17% Similarity=0.279 Sum_probs=51.5
Q ss_pred CcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHHHHHHhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHH
Q 043107 123 YPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLKKLFNYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKK 202 (240)
Q Consensus 123 f~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~ 202 (240)
++.++ .+|++.+...|.++. ..++..++.+++.+.+..... ..+.|+++.+ .. +.|. .
T Consensus 446 ~~dgn-~h~~v~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~--~~~~yl~~~~-~~--------------~~w~-~ 503 (534)
T 1w1o_A 446 TPSED-VFYAVSLLFSSVAPN---DLARLQEQNRRILRFCDLAGI--QYKTYLARHT-DR--------------SDWV-R 503 (534)
T ss_dssp CCSSS-EEEEEEECCCC---C---HHHHHHHHHHHHHHHHHHTTC--CCEESSCCCS-SH--------------HHHH-H
T ss_pred CCCcc-EEEEEEEecCCCCcc---hHHHHHHHHHHHHHHHHHhCC--CcEEECCCCC-Ch--------------HHHH-H
Confidence 44455 667666554442222 122223343444443333211 1367877654 21 2475 5
Q ss_pred hhhh-hHHHHHHHHhhcCcCCCCCCCCCCC
Q 043107 203 YFKN-NFYRLVHVKTMVDPENFFRNEQSIP 231 (240)
Q Consensus 203 y~G~-n~~RL~~iK~kyDP~nvF~~~~~I~ 231 (240)
.||+ +|+||++||++|||+|+|+..+.|-
T Consensus 504 ~~G~~~~~~l~~iK~~~DP~~ilnpgk~I~ 533 (534)
T 1w1o_A 504 HFGAAKWNRFVEMKNKYDPKRLLSPGQDIF 533 (534)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCCBCGGGCSC
T ss_pred HhCHHHHHHHHHHHHhcCchhhcCCCCcCC
Confidence 7997 9999999999999999999888663
No 12
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=95.15 E-value=0.032 Score=49.35 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCC
Q 043107 149 QRHDNMLKKLFNYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNE 227 (240)
Q Consensus 149 ~~~~~~~~~~~~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~ 227 (240)
+...++++++.+.+.++.+ .-|..+ +.... .+... ..|+ +++++++||++|||+++|++.
T Consensus 355 ~~~~~~~~~~~~lv~~~gG----~~~wgk-~~~~~------------~~~~~-~~Yp-~~~~f~~vk~~~DP~g~f~n~ 414 (422)
T 2vfr_A 355 AAVLPVVRRLEEALVPFAA----RPHWGK-VFTVP------------AGELR-ALYP-RLADFGALAGALDPAGKFTNA 414 (422)
T ss_dssp HHHHHHHHHHHHHHGGGTC----EECTTS-CCCCC------------HHHHH-TTCT-THHHHHHHHHHHCTTCTTCCH
T ss_pred hhHHHHHHHHHHHHHHcCC----cccccc-cCCCC------------HHHHH-HHCc-CHHHHHHHHHHhCCCCccCCH
Confidence 5566889999888877643 223222 22222 12233 3455 899999999999999999864
No 13
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=95.02 E-value=0.014 Score=53.38 Aligned_cols=34 Identities=32% Similarity=0.490 Sum_probs=29.6
Q ss_pred HHHHHhhhhhHHHHHHHHhhcCcCCCCCCCCCCCC
Q 043107 198 VWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 232 (240)
Q Consensus 198 ~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~~~I~~ 232 (240)
.|. ..||+.+.++++||++|||+++|+-.+-|-+
T Consensus 488 ~w~-~~~G~~~~~m~~iK~~~DP~~iLnPG~~if~ 521 (524)
T 2exr_A 488 EWI-RHFGNRWSRFVDRKAMFDPMAILSPGQKIFN 521 (524)
T ss_dssp HHH-HHHGGGHHHHHHHHHHHCTTCCBCGGGCSSC
T ss_pred HHH-HHhhhHHHHHHHHHhhcCchhhcCCCCccCC
Confidence 474 5789999999999999999999998877754
No 14
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=93.85 E-value=0.1 Score=47.48 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=23.4
Q ss_pred HHHHhhhhhH-HHHHHHHhhcCcCCCCCCCC
Q 043107 199 WGKKYFKNNF-YRLVHVKTMVDPENFFRNEQ 228 (240)
Q Consensus 199 ~~~~y~G~n~-~RL~~iK~kyDP~nvF~~~~ 228 (240)
|...+||++. +-+++||+.+||+|+|+-..
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 4467888765 55599999999999998544
No 15
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=92.12 E-value=0.5 Score=44.21 Aligned_cols=28 Identities=43% Similarity=0.667 Sum_probs=23.5
Q ss_pred HHHHhhhh-hHHHHHHHHhhcCcCCCCCC
Q 043107 199 WGKKYFKN-NFYRLVHVKTMVDPENFFRN 226 (240)
Q Consensus 199 ~~~~y~G~-n~~RL~~iK~kyDP~nvF~~ 226 (240)
|-..++|+ .++.|++||+.+||+|+|+-
T Consensus 626 ~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 626 WLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 55666774 79999999999999999974
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=89.90 E-value=3 Score=37.38 Aligned_cols=115 Identities=11% Similarity=0.229 Sum_probs=64.7
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccccCCCCCCCcCCCCceEEEEEEeEeCCCCCchhHHHHHHHHH
Q 043107 77 LTEPIPEEAFQGIYDIFLEQDQETNGVLMFFPYGGKISEISESEIPYPHRAGNIYTLLYYAGWDLESTDDTYQRHDNMLK 156 (240)
Q Consensus 77 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~gGav~~v~~~~tAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 156 (240)
+... -.+++++|.+.+.+........++.. ++ + .++.--+|++.. +.+.+...|. +. ...+++
T Consensus 359 vP~~-~~~al~~l~~~i~~~~~~~~~~v~~R-~~-~---~d~~~LS~~~~~---~tlal~~~~~-~~-------~~~~~~ 421 (481)
T 4feh_A 359 IPTE-AVDEFKKIIGVIQASGHYSFLNVFKL-FG-P---RNQAPLSFPIPG---WNICVDFPIK-DG-------LGKFVS 421 (481)
T ss_dssp EETT-CHHHHHHHHHHHHHTTCCCSCCEEEE-EC-C---CCSCTTCCCCSE---EEEEEEEECC-TT-------HHHHHH
T ss_pred eccc-HHHHHHHHHHHHHhcCCCceEEEEEE-Ee-C---CCCccCCCCCCc---eEEEEEccCC-cc-------HHHHHH
Confidence 3444 66788888888876531112223333 23 1 111223355443 3333333443 12 345667
Q ss_pred HHHHhhcccccCCCCcccccccCCCCCCCCCCCCchhHHhhHHHHHhhhhhHHHHHHHHhhcCcCCCCCCC
Q 043107 157 KLFNYMTPYVAKNPRTAYINYRDLDVGTNNKLGHTSVQEASVWGKKYFKNNFYRLVHVKTMVDPENFFRNE 227 (240)
Q Consensus 157 ~~~~~l~~~~~~~~~~~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~y~G~n~~RL~~iK~kyDP~nvF~~~ 227 (240)
++-+.+.++.+ .-|..-.. .++ .+.+...| .++++.++||+++||+++|.+.
T Consensus 422 ~le~i~~~~gG----Rphw~K~~-~~~------------~~~~~~~Y--P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 422 ELDRRVLEFGG----RLYTAKDS-RTT------------AETFHAMY--PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp HHHHHHHHTTC----EECGGGCS-SCC------------HHHHHHHC--TTHHHHHHHHHHHCTTCCBCCH
T ss_pred HHHHHHHHcCC----Eecchhcc-CCC------------HHHHHHhC--cCHHHHHHHHHhhCCccccCCH
Confidence 77777776643 44554332 223 23455555 8999999999999999999864
No 17
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=76.15 E-value=2.3 Score=38.92 Aligned_cols=25 Identities=20% Similarity=0.117 Sum_probs=20.6
Q ss_pred hhHHHHHHHHhhcCcCCCCCCCCCC
Q 043107 206 NNFYRLVHVKTMVDPENFFRNEQSI 230 (240)
Q Consensus 206 ~n~~RL~~iK~kyDP~nvF~~~~~I 230 (240)
..++-+++||+.+||+|+|+-..-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 4688899999999999999865443
No 18
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=75.14 E-value=1.5 Score=40.07 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=20.6
Q ss_pred hhHHHHHHHHhhcCcCCCCCCC
Q 043107 206 NNFYRLVHVKTMVDPENFFRNE 227 (240)
Q Consensus 206 ~n~~RL~~iK~kyDP~nvF~~~ 227 (240)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999864
No 19
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=74.27 E-value=1.8 Score=38.72 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=25.1
Q ss_pred hHHHHHhhh-hhHHHHHHHHhhcCcCCCCCC
Q 043107 197 SVWGKKYFK-NNFYRLVHVKTMVDPENFFRN 226 (240)
Q Consensus 197 ~~~~~~y~G-~n~~RL~~iK~kyDP~nvF~~ 226 (240)
..|-...+| ..++-+++||+.+||+|+++-
T Consensus 442 ~~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 442 RDELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 446677777 479999999999999999973
No 20
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=72.75 E-value=1.8 Score=39.79 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=21.9
Q ss_pred hhhhHHHHHHHHhhcCcCCCCCCCCCCCC
Q 043107 204 FKNNFYRLVHVKTMVDPENFFRNEQSIPP 232 (240)
Q Consensus 204 ~G~n~~RL~~iK~kyDP~nvF~~~~~I~~ 232 (240)
|++... |++||+.+||+|+|+-...+.+
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~ 562 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTS 562 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCC
Confidence 344444 9999999999999987666655
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=66.65 E-value=2.9 Score=38.10 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=21.3
Q ss_pred hhhHHHHHHHHhhcCcCCCCCCC
Q 043107 205 KNNFYRLVHVKTMVDPENFFRNE 227 (240)
Q Consensus 205 G~n~~RL~~iK~kyDP~nvF~~~ 227 (240)
|+|++.-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 68999999999999999999864
No 22
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=61.58 E-value=3.6 Score=37.81 Aligned_cols=28 Identities=18% Similarity=0.406 Sum_probs=18.7
Q ss_pred HHHHhhh-hhHHHHHHHHhhcCcCCCCCC
Q 043107 199 WGKKYFK-NNFYRLVHVKTMVDPENFFRN 226 (240)
Q Consensus 199 ~~~~y~G-~n~~RL~~iK~kyDP~nvF~~ 226 (240)
|-...+| ..++-+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 4445556 468999999999999999974
No 23
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=43.56 E-value=9.6 Score=26.88 Aligned_cols=14 Identities=21% Similarity=0.536 Sum_probs=12.0
Q ss_pred HHHHhhcCcCCCCC
Q 043107 212 VHVKTMVDPENFFR 225 (240)
Q Consensus 212 ~~iK~kyDP~nvF~ 225 (240)
.+|++||||++.++
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 45889999999986
No 24
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=36.31 E-value=15 Score=26.03 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=11.6
Q ss_pred HHHHhhcCcCCCCC
Q 043107 212 VHVKTMVDPENFFR 225 (240)
Q Consensus 212 ~~iK~kyDP~nvF~ 225 (240)
.+|++||||++.++
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 34789999999885
No 25
>3owt_C Regulatory protein SIR3; RCT domain, protein binding; 2.00A {Saccharomyces cerevisiae}
Probab=34.16 E-value=19 Score=17.86 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=10.6
Q ss_pred hHHHHHHHHhhcC
Q 043107 207 NFYRLVHVKTMVD 219 (240)
Q Consensus 207 n~~RL~~iK~kyD 219 (240)
.++-|.++|+||.
T Consensus 10 dfatlsklkkkyq 22 (27)
T 3owt_C 10 DFATLSKLKKKYQ 22 (27)
T ss_pred ehHHHHHHHhhhe
Confidence 5788899999983
No 26
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=28.30 E-value=47 Score=17.51 Aligned_cols=19 Identities=16% Similarity=0.370 Sum_probs=15.7
Q ss_pred hhhhHHHHHHHHhhcCcCC
Q 043107 204 FKNNFYRLVHVKTMVDPEN 222 (240)
Q Consensus 204 ~G~n~~RL~~iK~kyDP~n 222 (240)
|-+-+.|-++|.+|.+++.
T Consensus 10 FadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 10 FKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 4478999999999997754
No 27
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=22.19 E-value=35 Score=23.78 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=15.2
Q ss_pred hhHHHHHH-HHhhcCcCCCCCC
Q 043107 206 NNFYRLVH-VKTMVDPENFFRN 226 (240)
Q Consensus 206 ~n~~RL~~-iK~kyDP~nvF~~ 226 (240)
+.++.|++ ||||| |+.-|..
T Consensus 30 eTyEWLqAal~RKy-p~~~f~~ 50 (111)
T 1xg8_A 30 DIYDWLQPLLKRKY-PNISFKY 50 (111)
T ss_dssp HHHHHHHHHHHHHC-TTSCEEE
T ss_pred hHHHHHHHHHhCcC-CCCceEE
Confidence 56778875 79999 8777753
No 28
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=22.00 E-value=37 Score=22.66 Aligned_cols=14 Identities=21% Similarity=0.237 Sum_probs=12.6
Q ss_pred hhhHHHHHHHHhhc
Q 043107 205 KNNFYRLVHVKTMV 218 (240)
Q Consensus 205 G~n~~RL~~iK~ky 218 (240)
-+|++||.++|+++
T Consensus 26 ~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 26 QSNLEKLPKYKEKK 39 (84)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 38999999999887
Done!