BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043113
(172 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077620|ref|XP_002305331.1| predicted protein [Populus trichocarpa]
gi|222848295|gb|EEE85842.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 117/178 (65%), Gaps = 17/178 (9%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M GK+T+ RQKI +K+IENEDDRLITFSKR SGIYKKASE+ +A
Sbjct: 1 MEGKQTRGRQKIAIKRIENEDDRLITFSKRRSGIYKKASELVTLCGAEVAVLVFSPAGKA 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PS++++ANRFLG + NDN HPLV+A+ RINELNQQHN+LL +++ E+++
Sbjct: 61 FSFGHPSIESVANRFLGQNIAPNDNTHPLVEAHRKVRINELNQQHNELLSEMEAERDRGK 120
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSS 162
+LK+ K +Q WWE P+DEL+LQEL QM+ +++ H+ INE ASSS
Sbjct: 121 VLKEGTSEKSSQG-WWEAPIDELSLQELKQMNVMLEEFHKNLHKTINELRRNGGASSS 177
>gi|255557369|ref|XP_002519715.1| mads box protein, putative [Ricinus communis]
gi|223541132|gb|EEF42688.1| mads box protein, putative [Ricinus communis]
Length = 220
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 123/191 (64%), Gaps = 25/191 (13%)
Query: 1 MAGKK-TKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC----------- 48
MAGKK TK RQKI MK+IENE+DRLITFSKR SGIYKKASE+ I LC
Sbjct: 1 MAGKKQTKGRQKITMKRIENEEDRLITFSKRRSGIYKKASEL---ITLCGAEVGILVFSP 57
Query: 49 --------QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
PS+++IANRFLG + +DN HPLV+A+ RINELN+Q+N+LL +L+ EK
Sbjct: 58 AGKPFSFGHPSLESIANRFLGKNVPPSDNTHPLVEAHRKMRINELNKQYNELLNRLESEK 117
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK-TAAAAA 159
E+ +MLK+ R K WWE P+D+LN+QEL Q+ + ++LH T K+NEK +
Sbjct: 118 ERGSMLKKTIRGKGCN-NWWEAPIDDLNMQELEQIYAMFEELHSTLCKKMNEKRNNGVSI 176
Query: 160 SSSVAPPMYFH 170
SS P M H
Sbjct: 177 WSSSIPQMNNH 187
>gi|255557367|ref|XP_002519714.1| mads box protein, putative [Ricinus communis]
gi|223541131|gb|EEF42687.1| mads box protein, putative [Ricinus communis]
Length = 239
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 109/171 (63%), Gaps = 19/171 (11%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
GKKTK RQKIEMKKIENEDDRLITFSKR SGIYKKASE+ +
Sbjct: 7 GKKTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFS 66
Query: 47 LCQPSVKAIANRFLGMSQL---HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
PS+ AI NRF G +N HPL++A+ RI ELNQQHN+LLRQL+ EKE+
Sbjct: 67 FAHPSMDAITNRFFGQGSADRNNNPTTHPLIEAHRLMRIEELNQQHNELLRQLEIEKEKG 126
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKT 154
LKQ + + WW+TP++ELN+ ELLQM++A ++ + + K+ EKT
Sbjct: 127 KQLKQKHKKNNERKGWWDTPIEELNVPELLQMEAACKEIRTSLINKLKEKT 177
>gi|224054544|ref|XP_002298313.1| predicted protein [Populus trichocarpa]
gi|222845571|gb|EEE83118.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 115/182 (63%), Gaps = 21/182 (11%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
MA KKTK RQK+EMK+IEN+DDRLITFSKR SGIYKKASE+ +
Sbjct: 1 MASKKTKGRQKVEMKRIENQDDRLITFSKRRSGIYKKASELATLTGAEIAIAVFSPAGKP 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PSV+++ NRFL L D+ + LV+A+ RI EL Q+HND+ QLDEEKE+
Sbjct: 61 FSFGHPSVESVINRFL-EDPLDMDSTYHLVEAHRRMRIEELTQKHNDMQHQLDEEKEKG- 118
Query: 105 MLKQMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
LK ++KE + WW+T VDELN+QEL++++ +L T +KI E A+ ASSS
Sbjct: 119 -LKLKSKIKEMDSKGWWDTAVDELNIQELIELEKKFKELQMTLCSKIAE-NASTVASSSQ 176
Query: 164 AP 165
AP
Sbjct: 177 AP 178
>gi|449505973|ref|XP_004162618.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Cucumis
sativus]
Length = 269
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 23/179 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
K+TK RQKIEMKKI NEDDRLITFSKR SGIYKKASE+ +
Sbjct: 15 KQTKGRQKIEMKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 74
Query: 48 CQPSVKAIANRFLGMSQLHNDN-------IHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
P ++ IAN+FL ++ + N HPLV+A+ RINELNQQHN LL QLD EK
Sbjct: 75 AHPCIETIANKFLNGNKNNKGNNDDNNNNAHPLVEAHRRVRINELNQQHNQLLSQLDAEK 134
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
E+ L++++RV+ WWETP +EL ++EL ++D++ +++ ++ ++
Sbjct: 135 EKGKALEKLKRVRGNGRGWWETPTEELGIEELQEVDASFGEIYSNVCHQLKQRGVIGCC 193
>gi|449434264|ref|XP_004134916.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Cucumis
sativus]
Length = 260
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 103/172 (59%), Gaps = 18/172 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
K+TK RQKIEMKKI NEDDRLITFSKR SGIYKKASE+ +
Sbjct: 15 KQTKGRQKIEMKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 74
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P ++ IAN+FL + PLV+A+ RINELNQQHN LL QLD EKE+ L+
Sbjct: 75 AHPCIETIANKFL--NAAATTTTTPLVEAHRRVRINELNQQHNQLLSQLDAEKEKGKALE 132
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
+++RV+ WWETP +EL ++EL ++D++ +++ ++ ++
Sbjct: 133 KLKRVRGNGRGWWETPTEELGIEELQEVDASFGEIYSNVCHQLKQRGVIGCC 184
>gi|224104275|ref|XP_002313380.1| predicted protein [Populus trichocarpa]
gi|222849788|gb|EEE87335.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 20/181 (11%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-----WEAIHLC------- 48
M KKT+ RQK+EMK+I NEDDRL+TFSKR SGIYKK SE+ EA L
Sbjct: 1 MEAKKTRGRQKVEMKRIVNEDDRLVTFSKRRSGIYKKLSELITLTGTEAAFLVFSPGGKP 60
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PS++ + +RFL + + D H LV+ Y ARI EL Q+++++ +QLD++KE+ +
Sbjct: 61 FSFGHPSIENVLDRFL-ENPSNADGTHELVEEYRRARIEELTQKYDEMQQQLDDDKEKGS 119
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
LK + E + WW PV+ELNLQEL++++ + L T +K+ K ++ ASSS A
Sbjct: 120 KLKDKIQGNE-RGDWWNAPVEELNLQELIELEKKFEGLRMTLHSKM--KDSSNGASSSHA 176
Query: 165 P 165
P
Sbjct: 177 P 177
>gi|225462217|ref|XP_002269756.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 199
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 107/177 (60%), Gaps = 18/177 (10%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K+TK RQKIEMK+I NE+DRLITFSKR SGIYKKASE+ +A
Sbjct: 1 MEKKQTKGRQKIEMKRIPNEEDRLITFSKRRSGIYKKASELSTLCGAEVGVLVFSPAGKA 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
QPS++ I N+ L + NDN LV+A+ R+NEL+Q++++LL +++ KEQ+
Sbjct: 61 FSFGQPSIEKITNKVLYENPPPNDNTLNLVEAHRRFRLNELHQKYSELLSKMEVAKEQEK 120
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASS 161
+L+ ++V WWE P+ EL++ EL QM + LH+ + NE A++SS
Sbjct: 121 ILR--KKVPNRSKGWWEEPISELSMHELEQMAIKIQMLHKHVQHRANELWTRASSSS 175
>gi|225429161|ref|XP_002270964.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
gi|147772544|emb|CAN63001.1| hypothetical protein VITISV_024203 [Vitis vinifera]
Length = 214
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 21/187 (11%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
M K +K RQKIE+ KI ++ +TFSKR SG++KKASE+ +
Sbjct: 1 MVKKPSKGRQKIEISKIPKKNHLQVTFSKRRSGLFKKASELCTLCGANVAIIVFSPAGKV 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P V++I +RF + + N L++A+ +A + ELN Q +L QL+ EK++
Sbjct: 61 FSFGHPDVESIVDRFFTCNPIPEPNGLHLIEAHRNASVRELNLQLTQVLNQLEAEKKRGE 120
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
+L QMRR +TQ WWE P++EL++ EL Q+ ++++L + L++ +K AA+ S
Sbjct: 121 ILSQMRRASQTQ-CWWEAPINELSMPELEQLKVSMEELKKVVLSQ-GDKLLMEAANPS-- 176
Query: 165 PPMYFHN 171
P Y N
Sbjct: 177 -PFYMIN 182
>gi|357487743|ref|XP_003614159.1| Agamous-like MADS-box protein AGL62 [Medicago truncatula]
gi|355515494|gb|AES97117.1| Agamous-like MADS-box protein AGL62 [Medicago truncatula]
Length = 237
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKKT RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGKKTLGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYVALIIFSPGEKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V+ + +R+L + ND+I ++AY +A + ELN + LD +K + N
Sbjct: 63 SFGHPNVETVIDRYLSLVPTQNDDITQFIEAYRNASVRELNDILTHMKEALDIDKNRANE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
L Q+R+ E WW P D +N+ +L A++DL Q +A K S+ P
Sbjct: 123 LSQLRKNNEAH-FWWTCPFDRMNMVQLGSFKKALEDL-QKLVAHYANKVEIQGTSTQPVP 180
>gi|224140743|ref|XP_002323738.1| predicted protein [Populus trichocarpa]
gi|222866740|gb|EEF03871.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 17/157 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K+K RQK+EM KI NE + ++TFSKR SG++KKASE+ +
Sbjct: 3 RKSKGRQKLEMVKIPNESNLMVTFSKRRSGLFKKASELCTLCGAEVSIIVFSPGKKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV+ + R+L + L++A+ +AR++ELN Q + QL+ EK++ L
Sbjct: 63 GHPSVEKVMERYLSGNIPQTSGAFHLIEAHRNARVHELNMQLTQVANQLEVEKKRGEELD 122
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+MR+ +++ WWE P+ EL+L +L Q+ +A+ DL Q
Sbjct: 123 RMRKASQSR-NWWEKPLQELDLAQLQQLRAALQDLKQ 158
>gi|357462355|ref|XP_003601459.1| Agamous-like MADS-box protein AGL62 [Medicago truncatula]
gi|355490507|gb|AES71710.1| Agamous-like MADS-box protein AGL62 [Medicago truncatula]
Length = 207
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 18/162 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKI ++KI + +TFSKR SG++KKASE+ +A P V
Sbjct: 10 RQKIPIEKIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPANKAFSFGHPEV 69
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
++I +R+L + + H LV+A+ +A + +LN Q LL L+ EK+Q + +R+
Sbjct: 70 ESIIDRYLSRNPPQESSSHQLVEAHRNANVRDLNVQLTQLLSHLEIEKKQGEEIDHVRKA 129
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKT 154
++ Q WWE+PVDEL L ELLQ+ +++DL + L KI K
Sbjct: 130 RQMQ-FWWESPVDELGLNELLQLKVSIEDLRKN-LGKIASKC 169
>gi|357452959|ref|XP_003596756.1| MADS box protein [Medicago truncatula]
gi|355485804|gb|AES67007.1| MADS box protein [Medicago truncatula]
Length = 237
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KKT+ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 1 MSGAKKTRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V+ + +R+L + ND I ++ + A++ ELN + +D +K ++
Sbjct: 61 VFSFGYPNVETVIDRYLSLIPPQNDGIMEFMEDFRRAKVRELNGILTRMNDAIDIDKNRE 120
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
N L Q R++ Q WW P+DE+N+ +L + A++DL + L + + +S+
Sbjct: 121 NELNQQRKMNGGQ-FWWTRPIDEMNMVQLDLLKKALEDLQK--LVRQHADRVEMQGTSTQ 177
Query: 164 APPMYFHN 171
A P + N
Sbjct: 178 ALPFFVGN 185
>gi|357452955|ref|XP_003596754.1| MADS box protein [Medicago truncatula]
gi|355485802|gb|AES67005.1| MADS box protein [Medicago truncatula]
Length = 237
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KKT+ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 1 MSGAKKTRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V+ + +R+L + ND I ++ + A++ ELN + +D +K ++
Sbjct: 61 VFSFGYPNVETVIDRYLSLIPPQNDGIMEFMEDFRRAKVRELNGILTRMNDAIDIDKNRE 120
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
N L Q R++ Q WW P+DE+N+ +L + A++DL + L + + +S+
Sbjct: 121 NELNQQRKMNGGQ-FWWTRPIDEMNMVQLDLLKKALEDLQK--LVRQHADRVEMQGTSTQ 177
Query: 164 APPMYFHN 171
A P + N
Sbjct: 178 ALPFFVGN 185
>gi|357501077|ref|XP_003620827.1| MADS box protein [Medicago truncatula]
gi|355495842|gb|AES77045.1| MADS box protein [Medicago truncatula]
Length = 237
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KKT+ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 1 MSGAKKTRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V+ + +R+L + ND I ++ + A++ ELN + +D +K ++
Sbjct: 61 VFSFGYPNVETVIDRYLSLIPPQNDGIMEFMEDFRRAKVRELNGILTRMNDAIDIDKNRE 120
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
N L Q R++ Q WW P+DE+N+ +L + A++DL + L + + +S+
Sbjct: 121 NELNQQRKMNGGQ-FWWTRPIDEMNMVQLDLLKKALEDLQK--LVRQHADRVEMQGTSTQ 177
Query: 164 APPMYFHN 171
A P + N
Sbjct: 178 ALPFFVGN 185
>gi|297736389|emb|CBI25112.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
M K +K RQKIE+ KI ++ +TFSKR SG++KKASE+ LC +V I
Sbjct: 1 MVKKPSKGRQKIEISKIPKKNHLQVTFSKRRSGLFKKASEL---CTLCGANVAIIVFSPA 57
Query: 61 G-MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
G + + ++ +V + R ELN Q +L QL+ EK++ +L QMRR +TQ W
Sbjct: 58 GKVFSFGHPDVESIVDRFFTVR--ELNLQLTQVLNQLEAEKKRGEILSQMRRASQTQC-W 114
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYFHN 171
WE P++EL++ EL Q+ ++++L + L++ +K AA+ S P Y N
Sbjct: 115 WEAPINELSMPELEQLKVSMEELKKVVLSQ-GDKLLMEAANPS---PFYMIN 162
>gi|357488481|ref|XP_003614528.1| Myocyte-specific enhancer factor 2D [Medicago truncatula]
gi|355515863|gb|AES97486.1| Myocyte-specific enhancer factor 2D [Medicago truncatula]
Length = 237
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 25/161 (15%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKKT+ RQKIEMKK+ NE + +TFSKR G++KKASE+ +
Sbjct: 3 SGKKTQGRQKIEMKKMSNESNLQVTFSKRRIGLFKKASELCTLCGAYIALIIFSPSEKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDE----EKE 101
P+V+ + +RFL ND+I L++ Y A + EL NDLL ++++ +K
Sbjct: 63 SFGYPNVETVIDRFLSQVPPQNDDIMQLLEDYRRANVREL----NDLLTRMNDAIGIDKN 118
Query: 102 QQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
++N L Q+R + ETQ WW P+ E+N +L A++DL
Sbjct: 119 RENELIQVRMINETQ-FWWTRPICEMNKVQLELYKKALEDL 158
>gi|255562154|ref|XP_002522085.1| mads box protein, putative [Ricinus communis]
gi|223538684|gb|EEF40285.1| mads box protein, putative [Ricinus communis]
Length = 217
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 17/155 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K++K RQKI+M K+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 KRSKGRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V+ + +RFL + N L++A+ +A + ELN Q +L QL+ E+++ L
Sbjct: 63 GHPGVEVVIDRFLSRNPPQNSPTMQLIEAHRNASVRELNAQLTQVLTQLEMERKRGEELN 122
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
QMR+ + + WWE P+D+L + +L Q+ +++ L
Sbjct: 123 QMRKTGQNRC-WWEAPIDDLTMPQLEQLRMSLEQL 156
>gi|449465111|ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
gi|449484412|ref|XP_004156875.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 228
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 89/155 (57%), Gaps = 17/155 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K++ RQK+EM K+ NE + +TFSKR SG++KKASE+ +
Sbjct: 2 RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFSF 61
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V+A+ RF+ + + L++A+ +A + ELN Q +L QL+ E+++ L
Sbjct: 62 GHPCVEALIERFVTRNPPPSSGTLQLIEAHRNANVRELNAQLTQVLNQLEMERKRGEELN 121
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
++R+ + Q WWE P++E+ + +L Q+ +++D+L
Sbjct: 122 KLRKASQAQ-CWWELPIEEMEMHQLEQLKASLDEL 155
>gi|357444561|ref|XP_003592558.1| MADS-box transcription factor [Medicago truncatula]
gi|355481606|gb|AES62809.1| MADS-box transcription factor [Medicago truncatula]
Length = 228
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 19/188 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKK + RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGKKGRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADAALVVFSPSGKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P++ + +R+L + N+ L++A+ +A + ELN Q + LD EK+ +
Sbjct: 63 SFGHPNLDTVIDRYLSLVPPQNNGTMQLIEAHRNANVRELNAQMTQINNTLDAEKKIGDE 122
Query: 106 LKQMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
L +KET+ WW PVD +N +L A+++L + + +T ++ +
Sbjct: 123 LSHF--LKETEANFWWACPVDGMNKDQLELFKKALEELKKLLIQHATTRTLPFFVGNASS 180
Query: 165 PPMYFHNK 172
+Y H++
Sbjct: 181 SNVYLHHQ 188
>gi|357448597|ref|XP_003594574.1| Agamous-like MADS-box protein AGL11 [Medicago truncatula]
gi|355483622|gb|AES64825.1| Agamous-like MADS-box protein AGL11 [Medicago truncatula]
Length = 237
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 17/157 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+G+K++ RQKIEMKKI NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGRKSQGRQKIEMKKITNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPREKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V + +R+L N+ ++A+ A + ELN Q + + LD EK++
Sbjct: 63 SFGHPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSASVCELNIQVTQINQLLDIEKKRAEE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L + + ETQ WW PVD +N +L A+D+L
Sbjct: 123 LSNLHKATETQ-FWWAGPVDGMNRAQLELFKKALDEL 158
>gi|357436991|ref|XP_003588771.1| MADS-box transcription factor [Medicago truncatula]
gi|355477819|gb|AES59022.1| MADS-box transcription factor [Medicago truncatula]
Length = 237
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+G+K++ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALIIFSPGEKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
QP+V + + +L L N+ ++A+ A + ELN Q + + LD EK++
Sbjct: 63 SFGQPNVDTVIDHYLSRVPLKNNGTMQFIEAHRSANVRELNIQLTQINQLLDNEKKRDEE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
L +R+ ETQ WW VD +N +L A++++ + N AA + +
Sbjct: 123 LSHLRKANETQ-FWWAGSVDGMNRAQLEVFKKALEEIKKLVAHHANRLVIQAAPTQTF-- 179
Query: 166 PMYFHN 171
P + N
Sbjct: 180 PFFVGN 185
>gi|15229227|ref|NP_187060.1| protein agamous-like 57 [Arabidopsis thaliana]
gi|6721175|gb|AAF26803.1|AC016829_27 putative SRF-type transcription factor [Arabidopsis thaliana]
gi|67633620|gb|AAY78734.1| MADS-box family protein [Arabidopsis thaliana]
gi|332640516|gb|AEE74037.1| protein agamous-like 57 [Arabidopsis thaliana]
Length = 207
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 25/163 (15%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------- 48
G+KTK +QKIEMKK+EN DR+ITFSKR +GI+KK +E+ + +C
Sbjct: 9 GRKTKGKQKIEMKKVENYGDRMITFSKRKTGIFKKMNEL---VAMCDVEVAFLIFSQPKK 65
Query: 49 -----QPSVKAIANRFLGMSQ---LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
PS+K +A+R S+ L D+ PLV+AY R+++L ++ L +L +
Sbjct: 66 PYTFAHPSMKKVADRLKNPSRQEPLERDDTRPLVEAYKKRRLHDLVKKMEALEEELAMDL 125
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLH 143
E+ +LK+ R K+ WW P + L+ +EL Q A+ +L
Sbjct: 126 EKLKLLKESRNEKKLDKMWWNFPSEGLSAKELQQRYQAMLELR 168
>gi|357457939|ref|XP_003599250.1| MADS-box transcription factor [Medicago truncatula]
gi|355488298|gb|AES69501.1| MADS-box transcription factor [Medicago truncatula]
Length = 339
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 19/188 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKK + RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGKKGRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADAALVVFSPSGKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P++ + +R+L + N+ L++A+ +A + ELN + + LD EK+ +
Sbjct: 63 SFGHPNLDTVIDRYLSLVPPQNNGTMQLIEAHRNANVRELNARMTQINNTLDAEKKIDDE 122
Query: 106 LKQMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
L + +KET+ WW PVD +N +L A+++L + + +T ++ +
Sbjct: 123 LSHL--LKETEANFWWACPVDGMNKDQLELFKKALEELKKLLIQHATTRTLPFFVGNASS 180
Query: 165 PPMYFHNK 172
+Y H++
Sbjct: 181 SNIYLHHQ 188
>gi|225425098|ref|XP_002272514.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
gi|147787316|emb|CAN77992.1| hypothetical protein VITISV_013152 [Vitis vinifera]
Length = 212
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 30/191 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQ+IE+ KI+NE + +TFSKR +G++KKASE+ LC
Sbjct: 5 RKSKGRQRIEIAKIKNESNLQVTFSKRRAGLFKKASEL---CTLCGAETAIIIFSPGKKI 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P +++I +RFL + N L +A+ A INELN + ++L++++ EK++
Sbjct: 62 YSFGHPCIESIIDRFLARNPFLNAGALQLFQAHRSANINELNMELTEVLKEVEAEKKRGE 121
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ-------TFLAKINEKTAAA 157
L + + + Q WW PV+ELNL++L + +++ L + + + +E A +
Sbjct: 122 ALDKTTKAFQRQ-CWWAAPVEELNLEQLQMLKVSLEMLRKKVERQADKLIIEASEPPAFS 180
Query: 158 AASSSVAPPMY 168
A S A P Y
Sbjct: 181 APYSVGAIPPY 191
>gi|297828894|ref|XP_002882329.1| MADS-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328169|gb|EFH58588.1| MADS-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 25/163 (15%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------- 48
G+KTK +QKIEMKK+EN DR+ITFSKR +GI+KK +E+ + +C
Sbjct: 8 GRKTKGKQKIEMKKVENYGDRMITFSKRKAGIFKKMNEL---VAMCDVEVAFLIFSQAKK 64
Query: 49 -----QPSVKAIANRFLGMSQ---LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
PS++ +A+R S+ L D+ PLV+AY R ++L ++ L +L +
Sbjct: 65 PYTFAHPSMQEVADRLKNPSRQEPLAKDDTGPLVEAYKKRRFHDLIKKMEALEEELTMDL 124
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLH 143
E+ +LK+ R K+ WW P L+++EL Q A+ +L
Sbjct: 125 EKLKLLKESRNEKKLDKMWWNFPSKGLSVEELKQRHQAIVELR 167
>gi|357515637|ref|XP_003628107.1| MADS-box transcription factor [Medicago truncatula]
gi|355522129|gb|AET02583.1| MADS-box transcription factor [Medicago truncatula]
Length = 237
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K++ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 5 RKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSF 64
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
QP++ + +R+L N+ ++A+ +A + ELN Q + + LD EK++ L
Sbjct: 65 GQPNIDTVIDRYLSRVPPQNNGTMQFIEAHRNANVCELNTQLTQINQLLDMEKKRAEELS 124
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDD 141
+R+ E Q WW PVD +N+ +L A+++
Sbjct: 125 HLRKATEAQ-FWWAGPVDGMNMAQLEFFKKALEE 157
>gi|224093302|ref|XP_002309873.1| predicted protein [Populus trichocarpa]
gi|222852776|gb|EEE90323.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 17/159 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+ +K RQK+EM KI NE + ++TFSKR SG++KKASEI +
Sbjct: 3 RSSKGRQKLEMVKIANESNLMVTFSKRRSGLFKKASEISTLCGAEVAIIVFSPGKKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV+ + R++ + L++A+ ARI+ELN + QL+ EK++ L
Sbjct: 63 GHPSVEKVVERYVSGNIPQTSGAFHLIEAHRKARISELNMKLTQAQNQLEMEKKRGEELD 122
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF 146
++RR ++Q WW++P+ EL++ +L Q+ +++ L Q
Sbjct: 123 KLRRASQSQ-NWWDSPLQELSVAQLEQLKASLLTLKQNL 160
>gi|225429169|ref|XP_002271290.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 212
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 23/158 (14%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQK+EM K+ E + +TFSKR SG++KKASE+ LC
Sbjct: 5 RKSKGRQKVEMTKMTKESNLQVTFSKRRSGLFKKASELCT---LCGAEIAIIVFSPGKKM 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P V++I +RFL + L + L +A+ A + +LN Q +L QL+ EK++
Sbjct: 62 YSFGHPGVESIIDRFLTGNPLPHSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGE 121
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L QM++ + Q WW P++EL+ ++L + ++++L
Sbjct: 122 ALTQMKKASQAQ-YWWAAPIEELSFEQLELLKVSLENL 158
>gi|297736394|emb|CBI25117.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 23/158 (14%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQK+EM K+ E + +TFSKR SG++KKASE+ LC
Sbjct: 5 RKSKGRQKVEMTKMTKESNLQVTFSKRRSGLFKKASEL---CTLCGAEIAIIVFSPGKKM 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P V++I +RFL + L + L +A+ A + +LN Q +L QL+ EK++
Sbjct: 62 YSFGHPGVESIIDRFLTGNPLPHSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGE 121
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L QM++ + Q WW P++EL+ ++L + ++++L
Sbjct: 122 ALTQMKKASQAQ-YWWAAPIEELSFEQLELLKVSLENL 158
>gi|421957972|gb|AFX72863.1| MADS-box protein AGL70 [Aquilegia coerulea]
Length = 225
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 27/190 (14%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
M K + RQKIE+K+IE ED R +TFSKR +G++KKASE+ +
Sbjct: 1 MVRKPSMGRQKIEIKRIEQEDSRQVTFSKRRAGLFKKASELCILCGAHASIIVFSPAGKV 60
Query: 45 IHLCQPSVKAIANRFLGMS---QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKE 101
PSV+A+ +R+L S + + L+ A+ EL +QH +L+ Q + EK+
Sbjct: 61 FSFVHPSVEAVVDRYLSGSPATDVVSGGTVSLLDAHRGVNQRELTRQHTELVYQFEAEKK 120
Query: 102 QQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASS 161
+ +Q+++ + WWE P++ L L EL ++ Q + ++ + A + +
Sbjct: 121 KGEQQQQLKKANQQNVPWWEGPIENLGLHELERI--------QYHMGQLKSRVANGISQA 172
Query: 162 SVAPPMYFHN 171
+ P M N
Sbjct: 173 AFFPQMSIMN 182
>gi|225429167|ref|XP_002271109.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
gi|297736393|emb|CBI25116.3| unnamed protein product [Vitis vinifera]
Length = 213
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 22/182 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K+K RQ++EM K+ E + +TFSKR SG++KKASE+ +
Sbjct: 5 RKSKGRQRVEMAKMTKESNLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPGKKVYSF 64
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V++I +RFL + L N + L +A+ A + +LN Q +L QL+ EK++ L
Sbjct: 65 GHPCVESIIDRFLTRNPLPNSSALQLFEAHRSANVRDLNLQLTQVLNQLEIEKKRGEALT 124
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPM 167
QMR+ + Q WW ++EL+ + L + ++++L + ++++ A+ PP
Sbjct: 125 QMRKASQAQC-WWAASIEELSFERLELLKVSLENLKKNVALQVDKLMIEAS-----NPPT 178
Query: 168 YF 169
+F
Sbjct: 179 FF 180
>gi|225425096|ref|XP_002272375.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 212
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 17/155 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K+K RQ++EM K+ E + +TFSKR SG++KKASE+ +
Sbjct: 5 RKSKGRQRVEMTKMAKESNLQVTFSKRRSGLFKKASELSTLCGAETAIIVFSPGKKVYSF 64
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV++I +RFL + L N L +A+ A I ELN Q +L +L EK++ +L+
Sbjct: 65 GHPSVESIVDRFLTRNPLTNAGTLQLFEAHRSANIRELNMQLTQVLNELGAEKKRSEVLE 124
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
++++ +TQ WW P++ L ++L + +++ L
Sbjct: 125 KIKKASQTQC-WWAAPIEGLGFEQLELLKVSLEQL 158
>gi|356574345|ref|XP_003555309.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 226
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 17/155 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K + RQKI ++KI + +TFSKR SG++KKASE+ +A
Sbjct: 6 KSSLGRQKIPIEKIPKKSHLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPADKAFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V+++ +R+ + + H LV+A+ +A + +LN Q + L+ EK++ + L
Sbjct: 66 GHPEVESLIDRYTTRNPPQESSAHHLVEAHRNANVCDLNMQLTQVFNHLEIEKKRADDLD 125
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
+R+ ++ Q WWE+P+DEL L ELLQ+ +++++L
Sbjct: 126 HVRKARQRQ-FWWESPIDELGLNELLQLKASIEEL 159
>gi|255562152|ref|XP_002522084.1| mads box protein, putative [Ricinus communis]
gi|223538683|gb|EEF40284.1| mads box protein, putative [Ricinus communis]
Length = 226
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKI ++KI + +TFSKR +G++KKASE+ +A P V
Sbjct: 28 RQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSFGHPEV 87
Query: 53 KAIANRFLGMSQL-HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
+++ +RFL L + + H L++A+ +A + ELN Q L Q+++EK++ +L Q+R+
Sbjct: 88 ESVLDRFLARHPLPTSSSAHQLIEAHRNANVCELNMQLTHTLNQMEDEKKKGELLDQIRK 147
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
+ WWE P+DEL + EL Q+ A+++L + +I++ + +S
Sbjct: 148 SSQNMC-WWEAPIDELGMHELEQLRFALEELKKNVTKQISKILINSGSS 195
>gi|224103797|ref|XP_002313197.1| predicted protein [Populus trichocarpa]
gi|222849605|gb|EEE87152.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K++ RQK+EM K+ E + +TFSKR SG++KKASE+
Sbjct: 3 RKSRGRQKVEMVKMSKESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGNRVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V+ + +R+ + N L++A+ +A + ELN Q ++ Q + EK++ L
Sbjct: 63 GHPGVETVIDRYFTRNPPQNSGTMQLIEAHRNATVRELNMQLTQVVNQFEIEKKRGEELS 122
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKIN-EKTAAAAASSSVAPP 166
QMR+ + WWE PV+EL L ++ Q+ +++ L K+N K A + PP
Sbjct: 123 QMRKAQSQC--WWEAPVEELTLPQIEQLKVSLEGL------KMNVTKQAQKLLIENPGPP 174
Query: 167 MYF 169
+F
Sbjct: 175 QFF 177
>gi|356534256|ref|XP_003535673.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 226
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 17/155 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K + RQKI ++KI + +TFSKR SG++KKASE+ +A
Sbjct: 6 KSSLGRQKIPIEKIPKKSHLQVTFSKRRSGLFKKASELRTLCGVEIAVVVFSPADKAFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P V+++ +R+ + + H LV+A+ +A + +LN Q + + L+ EK++ + L
Sbjct: 66 GHPEVESLIDRYTTRNPPQESSAHHLVEAHRNANVRDLNMQLSQVFNHLEIEKKRGDDLD 125
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
R+ ++ Q WWE+P+DEL L ELLQ+ +++++L
Sbjct: 126 HARKARQRQ-FWWESPIDELGLNELLQLKASIEEL 159
>gi|356534260|ref|XP_003535675.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 247
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 89/159 (55%), Gaps = 18/159 (11%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KK++ RQKIEMKK+ NE + +TFSKR +G++KKASE+ +
Sbjct: 1 MSGPKKSRGRQKIEMKKMSNESNLQVTFSKRRNGLFKKASELCTLCGTDVALVVFSPGQK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V A+ +R+L + +++A+ A +++LN Q + QLD E+++
Sbjct: 61 VFSFGHPNVDAVIDRYLARPPPTDSGTMQIIEAHRMAHVHDLNVQLTQINNQLDHERKRT 120
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
N L M + + Q WW PVD +++ ++ Q +A++++
Sbjct: 121 NELNLMNKEAQAQ-MWWARPVDGMSMAQVKQFKAALEEM 158
>gi|297830632|ref|XP_002883198.1| hypothetical protein ARALYDRAFT_898356 [Arabidopsis lyrata subsp.
lyrata]
gi|297329038|gb|EFH59457.1| hypothetical protein ARALYDRAFT_898356 [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 28/188 (14%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K+K RQKIE+ KI+NE++ +TFSKR SG+ KKASE+ +
Sbjct: 3 RKSKGRQKIEIVKIKNENNLQVTFSKRRSGLLKKASELCTLCGAEVAIIVFSPGQKVYSF 62
Query: 48 CQPSVKAIANRFLGMSQL---HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P+V + +RFL + H++N+ P + +A + ELN L QL+ EK+
Sbjct: 63 GHPNVNVVMDRFLNFNPPRPHHHNNMQP-NETRRNAAVQELNNHLTLLSNQLEAEKKITG 121
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFL--------AKINEKTAA 156
LKQ R+ + WWE PV+ELN+ +L + +++L + A ++ +
Sbjct: 122 DLKQKRKDNKMFGNWWEEPVEELNMTQLTEFQCGLENLRKAVAYKVSKYHQADVDRRNFY 181
Query: 157 AAASSSVA 164
A +SS+ A
Sbjct: 182 AGSSSNFA 189
>gi|225429159|ref|XP_002270922.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
gi|297736388|emb|CBI25111.3| unnamed protein product [Vitis vinifera]
Length = 214
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQK+EM K+ E + +TFSKR SG++KKASE+ LC
Sbjct: 5 RKSKGRQKVEMTKMTKESNLQVTFSKRRSGLFKKASEL---CTLCGAETAIIVFSPGKKL 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P V++I +RFL + L N L +A+ + LN Q ++ QL+ EK++
Sbjct: 62 YSFGHPCVESIIDRFLMRNPLPNSGALQLFEAHRTTNVRNLNVQLTQVVNQLEGEKKRGE 121
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
L QM + + Q WW P++E +L++L + +++DL + + +E A
Sbjct: 122 ALTQMWKACKPQ-CWWAAPIEEFSLEQLELLKVSLEDLRRKVARQADELMIEAK-----N 175
Query: 165 PPMYF 169
PP +F
Sbjct: 176 PPAFF 180
>gi|255579749|ref|XP_002530713.1| mads box protein, putative [Ricinus communis]
gi|223529727|gb|EEF31667.1| mads box protein, putative [Ricinus communis]
Length = 183
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKI ++KI + +TFSKR +G++KKASE+ +A P V
Sbjct: 8 RQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSFGHPEV 67
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
++ RFL + L + + ++A +A + ELN + L QL+ EK++ L +MR+
Sbjct: 68 GSVLKRFLARNPLGSISCQ-FIQADRNANVRELNVKLIHALNQLEAEKKRGEALNRMRKS 126
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKIN 151
++ WWE PVDEL LQEL Q+ A++DL + +I+
Sbjct: 127 SQSMC-WWEAPVDELGLQELEQLRYALEDLKKNVAKEID 164
>gi|147810166|emb|CAN66899.1| hypothetical protein VITISV_037437 [Vitis vinifera]
Length = 395
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K+ K +K+EM+K+ NE+DRL++FSKR SGIY+KASE+ +
Sbjct: 1 MEKKQAKSHKKVEMRKMNNEEDRLVSFSKRRSGIYRKASELSTLCGAEVGILAFSPNGKP 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLD--EEKEQ 102
P +K+I N+ L + D L++ Y R+NEL+Q + + Q+ +E+E+
Sbjct: 61 FSFGHPCIKSITNKLLSENHTPCDGTQNLLEPYRRVRLNELHQNYKEACTQMKAAKEQEK 120
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSS 162
+ K + R K WWE PV EL++ L + + LH+ +I E A++S+S
Sbjct: 121 KIKKKSLDRSK----GWWEEPVIELDMDGLKRRADLIQKLHKHVQLQIKELQTMASSSTS 176
>gi|225462215|ref|XP_002269626.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 317
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K+ K +K+EM+K+ NE+DRL++FSKR SGIY+KASE+ +
Sbjct: 1 MEKKQAKSHKKVEMRKMNNEEDRLVSFSKRRSGIYRKASELSTLCGAEVGILAFSPNGKP 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLD--EEKEQ 102
P +K+I N+ L + D L++ Y R+NEL+Q + + Q+ +E+E+
Sbjct: 61 FSFGHPCIKSITNKLLSENHTPCDGTQNLLEPYRRVRLNELHQNYKEACTQMKAAKEQEK 120
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSS 162
+ K + R K WWE PV EL++ L + + LH+ +I E A++S+S
Sbjct: 121 KIKKKSLDRSK----GWWEEPVIELDMDGLKRRADLIQKLHKHVQLQIKELQTMASSSTS 176
>gi|297793603|ref|XP_002864686.1| MADS-box protein [Arabidopsis lyrata subsp. lyrata]
gi|297310521|gb|EFH40945.1| MADS-box protein [Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 22/181 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK+K RQKIEM K++NE + +TFSKR SG++KKASE+ +
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIVVFSPGRKVFSF 62
Query: 48 CQPSVKAIANRFLG----MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V+++ +RFL +S HN+ L + ++ + ELN +L QL+ EK++
Sbjct: 63 GHPNVESVIDRFLNNNPPLSHQHNN--MQLSETRRNSIVQELNNHLTQVLSQLESEKKKY 120
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
+ LK++R WWE PV+EL L +L +++L + + ++ A + V
Sbjct: 121 DELKKIREKTRALGNWWEDPVEELTLPQLDGFKGNLENLKKVVTVEASKYFQATVPNFYV 180
Query: 164 A 164
Sbjct: 181 G 181
>gi|357488259|ref|XP_003614417.1| Transcription factor MADS box [Medicago truncatula]
gi|355515752|gb|AES97375.1| Transcription factor MADS box [Medicago truncatula]
Length = 237
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 17/157 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKKT+ RQKIEMKK+ NE +TFSKR SG++KKASE+ +
Sbjct: 3 SGKKTRGRQKIEMKKMSNESSLQVTFSKRRSGLFKKASELCSLCGAYVALIIFSPSEKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V+ + + +L ND+I ++ + ++ELN + +LD EK + N
Sbjct: 63 SFGHPNVETVIDHYLSQVLPQNDDIMKIIGDDRNTVVSELNAVLTRIKDELDIEKNRGNE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L Q ++ K WW P+D +++ +L A++DL
Sbjct: 123 LSQPQK-KNLAQFWWNCPIDGMDMVQLESFKKALEDL 158
>gi|297821845|ref|XP_002878805.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324644|gb|EFH55064.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 23/170 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K++ RQKI M KI+ E R +TFSKR +G++KKASE+ +
Sbjct: 19 KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 78
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV+++ +R+ MS+ + + S A ELN Q +L +++EEK++ ++
Sbjct: 79 GHPSVESVLDRY--MSRNNMSLVQTQQPQGSPAASCELNMQLTHILSEVEEEKKKGQAME 136
Query: 108 QMRR--VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF---LAKINE 152
+MR+ V+ + WWE PV+E+NL +L +M A+++L +T +A NE
Sbjct: 137 EMRKESVRRSMINWWEKPVEEMNLVQLQEMKYALEELRKTVVTNMASFNE 186
>gi|356574341|ref|XP_003555307.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 242
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 22/159 (13%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KK++ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 1 MSGPKKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V A+ +R+LG + ++A+ A + ELN Q + L+ E+++
Sbjct: 61 VFSFGHPNVDAVIDRYLGRA----PPTESFIEAHRVANVRELNAQLTQINNHLNNERKRA 116
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L M++ + Q WW P+D +++ +L Q +A+++L
Sbjct: 117 EELNLMKKGAQAQ-LWWARPLDGMSIAQLKQFKAALEEL 154
>gi|15239333|ref|NP_200852.1| agamous-like MADS-box protein AGL62 [Arabidopsis thaliana]
gi|75309162|sp|Q9FKK2.1|AGL62_ARATH RecName: Full=Agamous-like MADS-box protein AGL62
gi|9757746|dbj|BAB08227.1| MADS-box protein-like [Arabidopsis thaliana]
gi|168485329|gb|ACA25224.1| MADS-box protein AGL62 [Arabidopsis thaliana]
gi|332009948|gb|AED97331.1| agamous-like MADS-box protein AGL62 [Arabidopsis thaliana]
Length = 299
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK+K RQKIEM K++NE + +TFSKR SG++KKASE+ +
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQL--HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V ++ +RF+ + L H N L + ++ + +LN +L QL+ EK++ +
Sbjct: 63 GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
LK++R + WWE PV+EL L +L +++L
Sbjct: 123 LKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENL 159
>gi|357444571|ref|XP_003592563.1| Transcription factor MADS box [Medicago truncatula]
gi|355481611|gb|AES62814.1| Transcription factor MADS box [Medicago truncatula]
Length = 228
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K + RQKIEMKKI NE + +TFSK +G++KKASE+ +
Sbjct: 5 RKGRGRQKIEMKKISNESNLQVTFSKHHNGLFKKASELCTLCGADVALVVFSPSGKVFSF 64
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P++ + +RFL + ND ++A+ +A + ELN Q + LD EK+ + L
Sbjct: 65 GHPNLDTVIDRFLSLIPTQNDGTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDELS 124
Query: 108 QMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPP 166
+ KET+ + WW VD +N +L A+++L + + +T ++ +
Sbjct: 125 NLH--KETEAKFWWACVVDGMNRDQLEIFKKALEELKKLVIQHAATRTLPFFVGNTSSSN 182
Query: 167 MYFHNK 172
+Y H++
Sbjct: 183 IYLHHQ 188
>gi|4559367|gb|AAD23028.1| putative MADS-box protein [Arabidopsis thaliana]
gi|194272620|gb|ACF37253.1| MADS box protein AGL61 [Arabidopsis thaliana]
gi|225898140|dbj|BAH30402.1| hypothetical protein [Arabidopsis thaliana]
Length = 210
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 23/170 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K++ RQKI M KI+ E R +TFSKR +G++KKASE+ +
Sbjct: 5 KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 64
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV+++ +R++ + + L S A ELN Q +L +++EEK++ ++
Sbjct: 65 GHPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAME 122
Query: 108 QMRR--VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF---LAKINE 152
+MR+ V+ + WWE PV+E+N+ +L +M A+++L +T +A NE
Sbjct: 123 EMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 172
>gi|357453733|ref|XP_003597147.1| MADS-box transcription factor [Medicago truncatula]
gi|355486195|gb|AES67398.1| MADS-box transcription factor [Medicago truncatula]
Length = 228
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+ KK + RQKIEMKK+ NE +TFSKR SG++KKASE+ +
Sbjct: 3 SAKKGRGRQKIEMKKMSNESHLQVTFSKRRSGLFKKASELCTLCGADAALVVFSTSGKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P++ + +R+L + N++ ++A+ +A + ELN Q + L+ EK+ +
Sbjct: 63 SFGHPNLDTVIDRYLSLVPPQNNDTVQFIEAHRNANVRELNAQLTQINSTLEAEKKIGDE 122
Query: 106 LKQMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVA 164
L + KETQ + WW P D +N +L A+++L + + +T ++ +
Sbjct: 123 LSNLH--KETQAKFWWACPADGMNRDQLELFKKALEELKKLVIQHATIQTLPFFVGNASS 180
Query: 165 PPMYFHNK 172
+Y H++
Sbjct: 181 SNIYLHHQ 188
>gi|224103801|ref|XP_002313198.1| predicted protein [Populus trichocarpa]
gi|222849606|gb|EEE87153.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 25 ITFSKRGSGIYKKASEIW----------------EAIHLCQPSVKAIANRFLGM-SQLHN 67
+TFSKR +G++KKASE+ +A P V +I +RFL + +
Sbjct: 26 VTFSKRRAGLFKKASELCTLCGVDIAILVFSPAHKAFSFGHPDVDSIMDRFLTRNAPPQS 85
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
H L++A+ +A + E N Q +L QL+ EK L QMR+ +Q WWE PV+EL
Sbjct: 86 SGTHQLIEAHRNANVREHNMQLTQILNQLEAEKRHSETLNQMRKSSRSQC-WWEAPVEEL 144
Query: 128 NLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
LQEL Q+ A+++L + + N+ ++ S P
Sbjct: 145 GLQELEQLRDALEELKKRLTKQTNKILIESSNSLPFLP 182
>gi|224077624|ref|XP_002305333.1| predicted protein [Populus trichocarpa]
gi|222848297|gb|EEE85844.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 94/174 (54%), Gaps = 20/174 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+KIE++ +++ + R +TFSKR +G++KKA+E+ + P+V
Sbjct: 3 RRKIEIEMVKDSNSRQVTFSKRRTGVFKKANELATLCGVQIAIIVFSPGGKPFSFGHPNV 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ +A RFL + + LV + AR+ +LN Q ND+LR+L E+++ +L++ ++
Sbjct: 63 EFVAQRFLNRDKKPKVSAGSLVDSQQEARLEKLNSQLNDILRKLQYERKRGELLEKAMKL 122
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPP 166
K ++P+ + ELNL EL +M +++L + ++ E A+++ P
Sbjct: 123 KGSEPKL----IGELNLDELRKMKGELEELQEKLRGRVTEMEASSSLLLLSKKP 172
>gi|30682571|ref|NP_850058.1| agamous-like MADS-box protein AGL61 [Arabidopsis thaliana]
gi|75339310|sp|Q4PSU4.1|AGL61_ARATH RecName: Full=Agamous-like MADS-box protein AGL61; AltName:
Full=Protein DIANA
gi|67633540|gb|AAY78694.1| MADS-box family protein [Arabidopsis thaliana]
gi|330252541|gb|AEC07635.1| agamous-like MADS-box protein AGL61 [Arabidopsis thaliana]
Length = 264
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 29/168 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKI M KI+ E R +TFSKR +G++KKASE+ + PSV
Sbjct: 64 RQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSV 123
Query: 53 KAIANRFLG---MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM 109
+++ +R++ MS + + S A ELN Q +L +++EEK++ +++M
Sbjct: 124 ESVLDRYVSRNNMSLAQSQQLQG-----SPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178
Query: 110 RR--VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF---LAKINE 152
R+ V+ + WWE PV+E+N+ +L +M A+++L +T +A NE
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226
>gi|357441089|ref|XP_003590822.1| MADS-box transcription factor [Medicago truncatula]
gi|355479870|gb|AES61073.1| MADS-box transcription factor [Medicago truncatula]
Length = 237
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+GKK + RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 3 SGKKGQGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIVFSPSDKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P V + +R+L N+ I ++A+ A + ELN + L +K+++N
Sbjct: 63 SFGHPDVYTVIDRYLSQVPPQNNRILQFIEAHRGAELRELNAMLTQINDALGIKKKRKNE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L + + E Q WW P++ +N +L + A+ DL
Sbjct: 123 LSDLCKKNEAQ-FWWACPIEGMNKVQLQSLKDALLDL 158
>gi|255583383|ref|XP_002532452.1| mads box protein, putative [Ricinus communis]
gi|223527842|gb|EEF29938.1| mads box protein, putative [Ricinus communis]
Length = 217
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 92/170 (54%), Gaps = 23/170 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K+TK RQKIE+K IE + + +TFSKR +G++KKASE+ +
Sbjct: 9 KRTKGRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68
Query: 48 CQPSVKAIANRFL--GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V+ + +R+L G D + R+ + N+++ D +++L+EEK+ M
Sbjct: 69 GHPNVETVLDRYLNEGNPDAKEDTAQTVTS--DSPRVQQWNKEYEDAMKELEEEKKCLAM 126
Query: 106 LKQMRRVKETQPR---WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+++ ++V+E+ WW+ PVD++ ++EL + A+ +L + + NE
Sbjct: 127 VEEWKKVRESNVNGGFWWDEPVDDMGVEELEEYAKALKELKRNVGIRANE 176
>gi|225429155|ref|XP_002270816.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
gi|297736387|emb|CBI25110.3| unnamed protein product [Vitis vinifera]
Length = 219
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 33/173 (19%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
M K +K RQKIE+ KI ++ +TFSKR SG++KKASE+ +
Sbjct: 1 MVEKSSKGRQKIEIAKIPKKNHLQVTFSKRKSGLFKKASELCTLCGANIAILVFSPGGKV 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHP-------LVKAYS-HARINELNQQHNDLLRQL 96
P V+ I F NI P L++A+ +A I++LN Q ++L QL
Sbjct: 61 FSFGHPDVRYIVYSFFA-------NIPPTKRSDLNLIEAHDQNASIHKLNLQLAEVLNQL 113
Query: 97 DEEKEQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAK 149
+ EK++ +L Q+R + WWE P+DEL+L EL Q+ ++++L + +++
Sbjct: 114 EAEKKRGEILGQIRASQGQC--WWEAPIDELSLFELQQLKVSMEELKKIVVSQ 164
>gi|255563264|ref|XP_002522635.1| mads box protein, putative [Ricinus communis]
gi|223538111|gb|EEF39722.1| mads box protein, putative [Ricinus communis]
Length = 207
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 25/154 (16%)
Query: 7 KRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQP 50
K RQ+IEM KI E +RL+TFSKR G++KKASE+ A P
Sbjct: 7 KGRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGNP 66
Query: 51 SVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMR 110
SV+ + + FL L++A+ +R+ ELN L +K++ L ++R
Sbjct: 67 SVETVVDCFLSNKPPRISGSLQLIEAHRSSRLRELN--------MLLTKKKRGEELDRIR 118
Query: 111 RVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+ + Q WWE+P++EL+L +L Q+ ++++ L Q
Sbjct: 119 KASQAQ-HWWESPIEELHLTQLKQLKASLEMLRQ 151
>gi|32402436|gb|AAN52800.1| MADS-box protein AGL62 [Arabidopsis thaliana]
Length = 279
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 34/155 (21%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK+K RQKIEM K++NE + +TFSKR SG++KKASE+ +
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+V ++ +RF+ N +PL +Q +N +L QL+ EK++ + LK
Sbjct: 63 GHPNVDSVIDRFI--------NNNPLPP----------HQHNNQVLSQLETEKKKYDELK 104
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
++R + WWE PV+EL L +L +++L
Sbjct: 105 KIREKTKALGNWWEDPVEELALSQLEGFKGNLENL 139
>gi|356574339|ref|XP_003555306.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 239
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 24/160 (15%)
Query: 1 MAG-KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------E 43
M+G KK++ RQKIEMKK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 1 MSGPKKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALIVFSPGEK 60
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
P+V A+ +R+L + ++A+ A + +LN Q + LD +++
Sbjct: 61 VFSFGHPNVDAVIDRYLERA----PPTESFMEAHRMAHVRDLNAQLTQISNHLDAGRKRA 116
Query: 104 NMLKQMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDL 142
L M+ KE Q WW PVD +++ ++ Q +A+++L
Sbjct: 117 EELNLMK--KEAQAHLWWARPVDGMSMAQMKQFKAALEEL 154
>gi|357519521|ref|XP_003630049.1| MADS-box transcription factor [Medicago truncatula]
gi|355524071|gb|AET04525.1| MADS-box transcription factor [Medicago truncatula]
Length = 220
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 17 IENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSVKAIANRFL 60
+ NE + +TFSKR SG++KKASE+ + P+V+ + +R+L
Sbjct: 1 MSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEKVFSFGYPNVETVIDRYL 60
Query: 61 GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+ ND I ++ + A++ ELN + +D +K ++N L Q R++ Q WW
Sbjct: 61 SLIPPQNDGIMEFMEDFRRAKVRELNGILTRMNDAIDIDKNRENELNQQRKMNGGQ-FWW 119
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYFHN 171
P+DE+N+ +L + A++DL + L + + +S+ A P + N
Sbjct: 120 TRPIDEMNMVQLDLLKKALEDLQK--LVRQHADRVEMQGTSTQALPFFVGN 168
>gi|297825493|ref|XP_002880629.1| hypothetical protein ARALYDRAFT_901071 [Arabidopsis lyrata subsp.
lyrata]
gi|297326468|gb|EFH56888.1| hypothetical protein ARALYDRAFT_901071 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 35/159 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWE-------AIHLCQP----------S 51
RQKI + KI+ E R +TFSKR + ++KKASE+ AI + P S
Sbjct: 3 RQKIPLVKIKKESHRQVTFSKRRASLFKKASELCTLMCGAEIAIIVFSPAQKPFSFKHTS 62
Query: 52 VKAIANRFLGMSQL-------HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
V+++ +R L + L H N+ P ELN + ++L + +EEK++
Sbjct: 63 VESVLDRHLSQNNLPSTQTQQHRGNVAPSC---------ELNLRLTEILNESEEEKKKGQ 113
Query: 105 MLKQMRRVKETQP--RWWETPVDELNLQELLQMDSAVDD 141
++ MR+V +P WWE PV+E+N+ +L +M SA++
Sbjct: 114 AMEDMRKVSARRPMINWWEAPVEEMNMVQLQEMKSALES 152
>gi|356574343|ref|XP_003555308.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 268
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 20/159 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK++ RQ++++KK+ NE + +TFSKR SG++KKASE+ +
Sbjct: 14 KKSRGRQRVDIKKMSNEANLQVTFSKRRSGLFKKASELCTLCGAEVALVVFSPGQKVFSF 73
Query: 48 CQPSVKAIANRFL-GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
PSV + R+L G++ DN++ + + A++ +LN Q + QL+ E+++ L
Sbjct: 74 GHPSVDGVIERYLTGVAPPEADNMN-YIDVHRMAKVVDLNAQLTHIKDQLEAERKRAKEL 132
Query: 107 KQMRRVKETQPRWWETPV-DELNLQELLQMDSAVDDLHQ 144
+++ ET WW PV D ++ LL++ A L Q
Sbjct: 133 GGIQKEAETH-LWWARPVADITDINNLLKLKKAFQQLKQ 170
>gi|421957976|gb|AFX72865.1| MADS-box protein AGL72, partial [Aquilegia coerulea]
Length = 150
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 33/156 (21%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R KIEMKKIE+ED R +TFSKR +G++KKASE+ +A P+V
Sbjct: 3 RTKIEMKKIESEDSRQVTFSKRRAGLFKKASELSILCGAEIAIVVFSPAGKAFSFGHPNV 62
Query: 53 KAIANRFLGMSQLH--NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMR 110
++ + FL N N H VK YS +L QL E ++ + +++R
Sbjct: 63 DSVVDSFLAGKPYKGANGNQHA-VKKYSK------------VLDQLTTESKKSDAARKLR 109
Query: 111 R--VKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+ ++ Q WWE P++ L EL + S+ + L Q
Sbjct: 110 KTSLQNRQIPWWEGPIENLGFNELQLLLSSYNRLQQ 145
>gi|297745700|emb|CBI41022.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 21/160 (13%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K R+KIEMK I D R +TFSKR SG++KKASE+ +A
Sbjct: 1 MERKTNAGRKKIEMKLISASDARQVTFSKRRSGLFKKASELATLCDSETAVIAFSPGGKA 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PSV+A+ NR+ G SQ + + + EL Q++N LL QL+ EK++
Sbjct: 61 FSFGHPSVEAVINRYDGQSQALDAGDQ----SVQTDNLRELIQRYNALLDQLEVEKKRGE 116
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+K+M ++ W TPV+ LN +L + ++DL +
Sbjct: 117 AIKRM-GMEMKAKTWLLTPVENLNPTQLQILKVLMEDLKK 155
>gi|359496666|ref|XP_002263270.2| PREDICTED: agamous-like MADS-box protein AGL61 [Vitis vinifera]
Length = 238
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 21/160 (13%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K R+KIEMK I D R +TFSKR SG++KKASE+ +A
Sbjct: 36 MERKTNAGRKKIEMKLISASDARQVTFSKRRSGLFKKASELATLCDSETAVIAFSPGGKA 95
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PSV+A+ NR+ G SQ + + + EL Q++N LL QL+ EK++
Sbjct: 96 FSFGHPSVEAVINRYDGQSQALDAGDQ----SVQTDNLRELIQRYNALLDQLEVEKKRGE 151
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+K+M + + W TPV+ LN +L + ++DL +
Sbjct: 152 AIKRMGMEMKAK-TWLLTPVENLNPTQLQILKVLMEDLKK 190
>gi|255557363|ref|XP_002519712.1| mads box protein, putative [Ricinus communis]
gi|223541129|gb|EEF42685.1| mads box protein, putative [Ricinus communis]
Length = 172
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 27/163 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+KIEMK +++ R +TFSKR +G++KKA+E+ + P+V
Sbjct: 3 RRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSFGHPTV 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+++A RFL + N P V ++ AR+ +LN+Q ND+ +QL EK+++ L + +
Sbjct: 63 QSVAERFLN----QDLNKKPRV-SFQEARLEKLNKQLNDVQKQLQYEKKKEAFLNKALKA 117
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
P++ DE++ ELL A+++L + A++ E A
Sbjct: 118 SGI-PKY-----DEMSADELLNFKKALEELREKMKARVVEMEA 154
>gi|255563266|ref|XP_002522636.1| mads box protein, putative [Ricinus communis]
gi|223538112|gb|EEF39723.1| mads box protein, putative [Ricinus communis]
Length = 214
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 26/181 (14%)
Query: 10 QKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSVK 53
Q EM I E + L+TF R G+ +KA E+ + C SV+
Sbjct: 9 QGFEMVNISKESNLLVTFLNRRFGVSRKADEVSILSGAEVTIVVFLPGNKVFSFCHTSVE 68
Query: 54 AIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+RFL + L A+ +R+ ELN + +L+ EK+Q L Q+R++
Sbjct: 69 TTVDRFLSRNPPQISGSLQLTDAHGKSRLPELNMVLIQTINELEMEKKQGEELDQIRKIT 128
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDL---------HQTFLAKINEKTAAAAASSSVA 164
+ Q +WWE+PV+EL+L +L Q+ ++++ + Q N A S+ V
Sbjct: 129 QAQ-QWWESPVEELDLTQLKQLKASLEMMLGDNVGKQAEQLLFQATNSPEFYAPTSNGVV 187
Query: 165 P 165
P
Sbjct: 188 P 188
>gi|15234456|ref|NP_195377.1| MADS-box transcription factor family protein [Arabidopsis thaliana]
gi|4006904|emb|CAB16834.1| putative MADS-box protein [Arabidopsis thaliana]
gi|7270607|emb|CAB80325.1| putative MADS-box protein [Arabidopsis thaliana]
gi|21592306|gb|AAM64257.1| putative MADS-box protein [Arabidopsis thaliana]
gi|32402432|gb|AAN52798.1| MADS-box protein AGL40 [Arabidopsis thaliana]
gi|91806780|gb|ABE66117.1| MADS-box protein [Arabidopsis thaliana]
gi|332661275|gb|AEE86675.1| MADS-box transcription factor family protein [Arabidopsis thaliana]
Length = 248
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 21/177 (11%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+ TK RQKIEMKK+ENE + +TFSKR G++KKASE+ +
Sbjct: 3 RSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQ-----LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ 102
PSV+ + +RF + H +N LV+ I LN ++L ++EK++
Sbjct: 63 GHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQK 122
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
+ +L ++ +E W+E V +L++ E Q+ SA+ D+ + + ++++ + +
Sbjct: 123 RMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVNVS 179
>gi|116831433|gb|ABK28669.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 21/177 (11%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+ TK RQKIEMKK+ENE + +TFSKR G++KKASE+ +
Sbjct: 3 RSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQ-----LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ 102
PSV+ + +RF + H +N LV+ I LN ++L ++EK++
Sbjct: 63 GHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQK 122
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
+ +L ++ +E W+E V +L++ E Q+ SA+ D+ + + ++++ + +
Sbjct: 123 RMVLDLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVNVS 179
>gi|297798246|ref|XP_002867007.1| hypothetical protein ARALYDRAFT_328110 [Arabidopsis lyrata subsp.
lyrata]
gi|297312843|gb|EFH43266.1| hypothetical protein ARALYDRAFT_328110 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMS 63
+ TK RQKIEMKK++NE + +TFSKR G++KKASE+ LC + I F
Sbjct: 3 RSTKGRQKIEMKKMKNESNLQVTFSKRSFGLFKKASELCT---LCGAEILMIV--FSPGG 57
Query: 64 QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
++ + HP V+ H R N +L ++EK ++ +L M+ +E + W+E
Sbjct: 58 KVFSFG-HPSVQDLIH-RFENPNYNSIIVLTTQEKEKNKRMVLDIMKESREQRGNWYEKD 115
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
V +L++ E + SA+ D+ + +++++++ + S
Sbjct: 116 VKDLDMNETNHLISALQDVKKKLVSEMSQQYSQVNVS 152
>gi|224140447|ref|XP_002323594.1| predicted protein [Populus trichocarpa]
gi|222868224|gb|EEF05355.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+ +K RQKIE+KK++ E +R +TFSKR +G++KKA+E+ LC
Sbjct: 2 RTSKGRQKIEIKKVQKESNRYVTFSKRKNGLFKKATEL---STLCGAETAVIVFSEHRKL 58
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
QP V + +R+L ++ N P+ +++ Q++ L++L+EE+
Sbjct: 59 FSCGQPDVDKVLDRYLAETEKVPSNFPPVTNNNIESQLAN-KQEYARSLKRLEEEQTVAK 117
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKI 150
M+ M + E WW+ P+D + EL +++ L + + ++
Sbjct: 118 MIGNMNDMNEG-GFWWDLPIDNMEQDELEAYKESMEQLKKNVITRL 162
>gi|255586776|ref|XP_002534006.1| mads box protein, putative [Ricinus communis]
gi|223525996|gb|EEF28377.1| mads box protein, putative [Ricinus communis]
Length = 215
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 24/187 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
K +K RQKIE+KK+EN + R +TFSKR GI+KKA+E+ +
Sbjct: 13 KTSKGRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVFSC 72
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINEL----NQQHNDLLRQLDEEKEQQ 103
P V + +R+L ++ N LV++ S + + Q++N L +L+E K
Sbjct: 73 GNPDVDEVIDRYLAETEGDGGN-SCLVESSSSSSSTAVQTVDEQEYNKSLARLEEMKRAV 131
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSV 163
M V WW+ P++ + +EL ++ L + L+KI E A AA+ S
Sbjct: 132 QM---NSNVINNGEFWWDLPIEMMGKEELEGYKESLVKLRKNVLSKIEEMAANNAANESR 188
Query: 164 APPMYFH 170
+ H
Sbjct: 189 IISQFIH 195
>gi|297838319|ref|XP_002887041.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332882|gb|EFH63300.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+KIE++KI+N+ + +TFSKR SG++KKASE+ LC + I
Sbjct: 8 RRKIEIEKIKNQSNLQVTFSKRRSGLFKKASELRT---LCDAEIAIIV------------ 52
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
P K YS N LN +++ + ++E+ ++ L Q R + +WWE EL
Sbjct: 53 -FSPGGKVYSFRHPNMLNDSLTEVMAEKEKEQRKKRSLVQNERENKNAEKWWEKSPKELK 111
Query: 129 LQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYF 169
L +L M ++DL + K+ E T+ ++ P Y+
Sbjct: 112 LTQLTCMKHVLEDLKK----KVGEITSYVFQTN----PNYY 144
>gi|297738268|emb|CBI27469.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 48/191 (25%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQ+IE+ KI+NE + +TFSKR +G++KKASE+ LC
Sbjct: 5 RKSKGRQRIEIAKIKNESNLQVTFSKRRAGLFKKASEL---CTLCGAETAIIIFSPGKKI 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P +++I +RFL + N L +A+ L+ EK++
Sbjct: 62 YSFGHPCIESIIDRFLARNPFLNAGALQLFQAH------------------LEAEKKRGE 103
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ-------TFLAKINEKTAAA 157
L + + + Q WW PV+ELNL++L + +++ L + + + +E A +
Sbjct: 104 ALDKTTKAFQRQ-CWWAAPVEELNLEQLQMLKVSLEMLRKKVERQADKLIIEASEPPAFS 162
Query: 158 AASSSVAPPMY 168
A S A P Y
Sbjct: 163 APYSVGAIPPY 173
>gi|255582411|ref|XP_002531994.1| mads box protein, putative [Ricinus communis]
gi|223528353|gb|EEF30393.1| mads box protein, putative [Ricinus communis]
Length = 197
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 32/175 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWE------AIHLCQPSVKAIANRFLG- 61
R+K +M I+ E R ++FSKR +GI+KKASE+ A+ + P KA G
Sbjct: 3 RKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFT---FGH 59
Query: 62 ------MSQLHN----DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
M +L + DN A A + +LN+Q++DLL QL E+++ LKQM
Sbjct: 60 PCFEAIMKKLADPENPDNGFAEHMAEHEATLRDLNKQYSDLLEQLKAEEKRGEELKQM-- 117
Query: 112 VKETQPRWWETPVDELNLQELLQ----MDSAVDDLHQTFLAKINEKTAAAAASSS 162
+ P+D+LNL ELL M+ A DL + A+ + + +A+SS
Sbjct: 118 ------LLLDKPIDDLNLDELLTLQAFMERAKADLLKRLGARPVQNSDPSASSSG 166
>gi|46806462|dbj|BAD17598.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|46806648|dbj|BAD17728.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|218201669|gb|EEC84096.1| hypothetical protein OsI_30408 [Oryza sativa Indica Group]
Length = 210
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 33/192 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
RQKIE+++IE+E+ R + FSKR +G +KKASE+ +A PSV
Sbjct: 17 RQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPSV 76
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML-KQMRR 111
+ + +RFL S + S + + ELN+Q+ +L +D K ++ K M +
Sbjct: 77 EFLLDRFLSSSLPATAGKE---EGSSVSVVAELNRQYGELRAMVDAHKARRERAEKTMEK 133
Query: 112 VKETQPRWWETP---VDELNLQELLQMDSAVDDLHQTFLAK----------INEKTAAAA 158
++ QP W P V + +EL+ + + + + A+ + +
Sbjct: 134 QRQRQPAAWMDPEAEVGRMAPEELMALGTKLVAVQGGVAARADQMLRDALLLGRRPNTTT 193
Query: 159 ASSSVAPPMYFH 170
+++ APP +FH
Sbjct: 194 TTTTRAPPGFFH 205
>gi|226495205|ref|NP_001151024.1| DNA binding protein [Zea mays]
gi|195643716|gb|ACG41326.1| DNA binding protein [Zea mays]
gi|413946617|gb|AFW79266.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 247
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
+ + RQKIE+++IE+++ R + FSKR +G++KKASE+ +A
Sbjct: 6 RPSMGRQKIEIRRIESDEARQVCFSKRRAGLFKKASELSILCGADVAAVVFSPAGKAFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR-----INELNQQHNDLLRQLDEEKEQ 102
PSV+++ +RFL S S ++ELN+QH DL QLD EK +
Sbjct: 66 GHPSVESVVDRFLASSTPSPAGAGAGAGHSSAGGGEDRAVSELNRQHGDLRAQLDAEKAR 125
Query: 103 Q----NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
Q +++ R W + + + +L+ +A+ + A ++
Sbjct: 126 QERADEAIRKEREAGSPAMAWIDADLGAMGHDDLVAFWAALAGVQAAVAASADQ 179
>gi|359483542|ref|XP_002264830.2| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 223
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K RQKIE++KIE ++ L+TFSKR +G++KKA E+ A
Sbjct: 9 RKNMGRQKIEIRKIEKKNSLLVTFSKRRTGLFKKAGELCVLCGVEAAVIVFSPAGRAFVF 68
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+ A+ +RFLG I V ++ +Q+ + + + + +KE+
Sbjct: 69 GHPTADAVIDRFLGRD---TGTISRAVVPAEQVVHGQVQRQYLEPVGRAEAKKEEGGF-- 123
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
WW+ P++ + L EL Q +++ L + ++ E T+
Sbjct: 124 -----------WWDAPIENMGLNELEQFKGSLEKLRKKVADRVEEMTS 160
>gi|242043394|ref|XP_002459568.1| hypothetical protein SORBIDRAFT_02g006710 [Sorghum bicolor]
gi|241922945|gb|EER96089.1| hypothetical protein SORBIDRAFT_02g006710 [Sorghum bicolor]
Length = 253
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
GK R+K E+K IENED R + FSKR G++KKASE+ +
Sbjct: 4 GKAAMPRRKTEIKHIENEDARKVCFSKRRQGLFKKASELSILCGATVGSVVFSNSGRSFS 63
Query: 47 LCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR----------INELNQQHNDLLRQL 96
PS+ +A+RFL +++ P+ A A ++ LN + ++L + L
Sbjct: 64 FGHPSINDVADRFL-------NSVAPVDFASGGASHDNSGAVMDTVHRLNMELSELQQAL 116
Query: 97 DEEKEQQNMLKQMRRVKETQP--RWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKT 154
D E +++ LK+ ++ QP +W V EL L EL + ++ + K N+
Sbjct: 117 DSENKKKERLKEAIEKEKGQPMMQWLNANVLELGLAELQEFQKCLEAVDIAVKEKTNQIL 176
Query: 155 AAAAASSSVAPP 166
A A ++ + P
Sbjct: 177 AEARQTTQGSVP 188
>gi|195625884|gb|ACG34772.1| DNA binding protein [Zea mays]
gi|413948546|gb|AFW81195.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 248
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 28/123 (22%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
+ + RQKIE+++IE+++ R + FSKR +G++KKASE+ +A
Sbjct: 6 RPSMGRQKIEIRRIESDEARQVCFSKRRAGLFKKASELSILCGADVAAVVFSPAGKAFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHA-------RINELNQQHNDLLRQLDEEK 100
PSV+++ RFL S + P H+ ++ELN+QH +L QLD K
Sbjct: 66 GHPSVESVVERFLASS-----SPSPAGAGAGHSASGGEDRAVSELNRQHGELRAQLDAVK 120
Query: 101 EQQ 103
+Q
Sbjct: 121 ARQ 123
>gi|421957982|gb|AFX72868.1| MADS-box protein AGL75, partial [Aquilegia coerulea]
Length = 168
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 23/152 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
R+KI ++KI+ R +TFSKR +G++KKASE+ + PSV
Sbjct: 12 RKKIPIEKIQRSAHRQVTFSKRRTGLFKKASELCILCGAEVAIVVFSPAGKVFSFGHPSV 71
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQ-QHNDLLRQLDEEKEQQNMLKQMRR 111
+++ +RFL N N+ +ARI E Q ++ ++L QL EK++ +Q ++
Sbjct: 72 ESVVDRFLNQHDHMNHNV-----GLINARIREQQQEEYTEVLNQLQAEKKRGETYEQYKK 126
Query: 112 VKETQPRWW-ETPVDELNLQELLQMDSAVDDL 142
+ ++ + P+D+L L EL +M +++L
Sbjct: 127 TEGDNHQYCLDAPMDDLGLHELEEMKRTLEEL 158
>gi|242091429|ref|XP_002441547.1| hypothetical protein SORBIDRAFT_09g029120 [Sorghum bicolor]
gi|241946832|gb|EES19977.1| hypothetical protein SORBIDRAFT_09g029120 [Sorghum bicolor]
Length = 245
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
+ + RQKIE+++IE+++ R + FSKR +G++KKASE+ +A
Sbjct: 6 RPSMGRQKIEIRRIESDEARQVCFSKRRAGLFKKASELSILCGADVAAVVFSPAGKAFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR---INELNQQHNDLLRQLDEEKEQQ- 103
PSV+++ RFL S + ++ELN+QH +L QLD EK +Q
Sbjct: 66 GHPSVESVVERFLASSSPSPAGAGAGHSSAGGGEDRAVSELNRQHGELRAQLDAEKTRQE 125
Query: 104 ---NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+++ R + W + + + +L+ +A+ + A ++
Sbjct: 126 RADEAIRKEREARSPAMAWIDADLSAMGHDDLVAFWTALAGVQAAVAASADQ 177
>gi|421957974|gb|AFX72864.1| MADS-box protein aGL71 [Aquilegia coerulea]
Length = 206
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M K TK RQKIE+K+I +E R +TFSKR SG++KK SE+ +A
Sbjct: 4 MVKKSTKGRQKIEIKRINDEASRQVTFSKRRSGLFKKFSELSILCGVKTGVVIFSPAGKA 63
Query: 45 IHLCQPSVKAIANRFL-GMSQLH---NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
P++K+I + L G + L+ D +V A ++++ELN Q+N +LD E
Sbjct: 64 YSFGHPNIKSIVDGVLTGDTSLNLGEPDVNLGIVDARRASKVHELNNQYNYHSNRLDIEM 123
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNL 129
++ L+ E QP E D++ L
Sbjct: 124 GRKEALQVSTNTTERQPYELEMLYDQMKL 152
>gi|2505875|emb|CAA73304.1| MADS-box protein [Arabidopsis thaliana]
Length = 244
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
MA K RR KIE+ K+ NE + +TFSKR SG++KK SE+ +A
Sbjct: 1 MARKNLGRR-KIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKA 59
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P+V + + LG HN+ ++ + RI LN+ +++ + ++E+E +
Sbjct: 60 YSFGHPNVNKLLDHSLGRVIRHNNT--NFAESRTKLRIQMLNESLTEVMAEKEKEQETKQ 117
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA--------- 155
+ Q R + +WW ELNL + M ++ L + +++EK A
Sbjct: 118 SIVQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKK----EVDEKVAQLHHRNLNF 173
Query: 156 AAAASSSVAPP 166
+SS+VA P
Sbjct: 174 YVGSSSNVAAP 184
>gi|15223420|ref|NP_171660.1| protein agamous-like 28 [Arabidopsis thaliana]
gi|8920589|gb|AAF81311.1|AC061957_7 Contains strong similarity (practically identical) to a MADS-box
protein from Arabidopsis thaliana gi|2505875 and
contains a SRF-type transcription factor (DNA-binding
and dimerisation) PF|00319 domain [Arabidopsis thaliana]
gi|32402426|gb|AAN52795.1| MADS-box protein AGL28 [Arabidopsis thaliana]
gi|91805725|gb|ABE65591.1| MADS-box protein [Arabidopsis thaliana]
gi|225897852|dbj|BAH30258.1| hypothetical protein [Arabidopsis thaliana]
gi|332189179|gb|AEE27300.1| protein agamous-like 28 [Arabidopsis thaliana]
Length = 247
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
MA K RR KIE+ K+ NE + +TFSKR SG++KK SE+ +A
Sbjct: 1 MARKNLGRR-KIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKA 59
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P+V + + LG HN+ ++ + RI LN+ +++ + ++E+E +
Sbjct: 60 YSFGHPNVNKLLDHSLGRVIRHNNT--NFAESRTKLRIQMLNESLTEVMAEKEKEQETKQ 117
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA--------- 155
+ Q R + +WW ELNL + M ++ L + +++EK A
Sbjct: 118 SIVQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKK----EVDEKVAQLHHRNLNF 173
Query: 156 AAAASSSVAPP 166
+SS+VA P
Sbjct: 174 YVGSSSNVAAP 184
>gi|116830847|gb|ABK28380.1| unknown [Arabidopsis thaliana]
Length = 248
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
MA K RR KIE+ K+ NE + +TFSKR SG++KK SE+ +A
Sbjct: 1 MARKNLGRR-KIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKA 59
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
P+V + + LG HN+ ++ + RI LN+ +++ + ++E+E +
Sbjct: 60 YSFGHPNVNKLLDHSLGRVIRHNNT--NFAESRTKLRIQMLNESLTEVMAEKEKEQETKQ 117
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA--------- 155
+ Q R + +WW ELNL + M ++ L + +++EK A
Sbjct: 118 SIVQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKK----EVDEKVAQLHHRNLNF 173
Query: 156 AAAASSSVAPP 166
+SS+VA P
Sbjct: 174 YVGSSSNVAAP 184
>gi|357154862|ref|XP_003576926.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Brachypodium
distachyon]
Length = 277
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
RQKIE+++I++++ R + FSKR +G++KKASE+ +A PSV
Sbjct: 12 RQKIEIRRIDSDEARQVCFSKRRAGLFKKASELSILCGAQVAAIVFSPAGKAFSFGTPSV 71
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
A+ +RFLG + + EL +QH +L Q++ EK + L++ ++
Sbjct: 72 DAVLDRFLGGAARPGGTGGGRAAGSESPVLAELIRQHAELRAQVEVEKARAEALRKEQKA 131
Query: 113 KET---QPRWWETPVDELNLQELLQMDSAVDDLH 143
P+W + + E++ EL+ +A+ ++
Sbjct: 132 TGAAPGAPKWLDCELSEMSEPELVAFAAALVEVQ 165
>gi|145324072|ref|NP_001077625.1| protein agamous-like 64 [Arabidopsis thaliana]
gi|32402452|gb|AAN52808.1| MADS-box protein AGL64 [Arabidopsis thaliana]
gi|332193037|gb|AEE31158.1| protein agamous-like 64 [Arabidopsis thaliana]
Length = 185
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 31/180 (17%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M KKTK +Q+I +KKIE ++DRL+T SKR +GIY K SE+ +
Sbjct: 1 MKPKKTKGKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKP 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNI---HPLVKAYSHARINELNQQHNDLLRQLDEEKE 101
PS +A+A RFL + + ++ A+ A+I EL + +N L+ ++ E+
Sbjct: 61 YTFGSPSFQAVAERFLNGEASSSSSSSLQRSVMNAHQQAKIQELCKVYNRLVEEITVEEV 120
Query: 102 QQNMLKQMRRVKETQP----RWWET-PVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LK+ + E P WW+ P D + +E+ +M + HQ K+ E+ A+
Sbjct: 121 K---LKKTAALAEMMPMNEDAWWKVDPNDVKDREEVKKM----MEKHQELYEKLCEEAAS 173
>gi|15218684|ref|NP_174168.1| protein agamous-like 59 [Arabidopsis thaliana]
gi|6560766|gb|AAF16766.1|AC010155_19 F3M18.10 [Arabidopsis thaliana]
gi|332192858|gb|AEE30979.1| protein agamous-like 59 [Arabidopsis thaliana]
Length = 182
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M KKTK +QKI +KKIE ++ R +TFSKR +GIY K SE+ +
Sbjct: 1 MNPKKTKGKQKINIKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKP 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL--DEEK-E 101
PS +A+A RFL + + ++ A+ A+I EL +++N L+ +L DE K +
Sbjct: 61 YTFGSPSFQAVAERFLNGDASSSSSSSLVMNAHKQAKIQELCKKYNRLVEELKVDEVKVK 120
Query: 102 QQNMLKQMRRVKETQPRWWET 122
+ L + R V + WW+
Sbjct: 121 KAAALAETRVV--NKDVWWKV 139
>gi|224097983|ref|XP_002311102.1| predicted protein [Populus trichocarpa]
gi|222850922|gb|EEE88469.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 20/146 (13%)
Query: 25 ITFSKRGSGIYKKASEI----------------WEAIHLCQPSVKAIANRFLG---MSQL 65
+TFSKR +G++KKASE+ +A PSV ++ +RFL
Sbjct: 26 VTFSKRRAGLFKKASELSTLCGVDIAMIVFSPAQKAFSFGHPSVDSMMHRFLTGSPPPPP 85
Query: 66 HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+ +H L++ A ++E N Q +L QL+ EK+ +L QMR+V +Q WE P++
Sbjct: 86 PSSGLHQLIETRRDANVHEQNMQLAQILNQLEAEKKNGEVLDQMRKVNRSQC-CWEAPIE 144
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKIN 151
EL L EL Q+ A+++L +T ++N
Sbjct: 145 ELELHELEQLRGALEELKKTVAKQVN 170
>gi|224104271|ref|XP_002313379.1| predicted protein [Populus trichocarpa]
gi|222849787|gb|EEE87334.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
D+ + LV+A RI EL ++++++ RQLDE+KE + LK R+ +++ WW+ P++EL
Sbjct: 2 DSTYHLVEARRRMRIEELARKYDEMQRQLDEKKETSHRLKGKRKENDSKG-WWDAPIEEL 60
Query: 128 NLQELLQMDSAVDDLHQTF-LAKINEKTAAAAASSSVAPPMYF 169
+L++L++++ + L T +AK N+ ASSS AP + +
Sbjct: 61 DLKDLIELEKKFERLQMTNKIAKNND-----GASSSQAPEIGY 98
>gi|356537238|ref|XP_003537136.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 178
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----AN 57
KKTK RQKIEMKK+ NE + +TFSKR +G++KKASE+ LC V I N
Sbjct: 12 VAKKTKGRQKIEMKKMRNESNLRVTFSKRRTGVFKKASEL---ATLCGVDVVVIMFSPGN 68
Query: 58 RFLGMSQLHNDNI---------HPLV-----KAYSHARINELNQQHNDLLRQLDEEKEQQ 103
R D++ PL+ K +S EL+ + L Q+ EK++
Sbjct: 69 RVFSFGSPSVDSVVQRYKTQGPPPLLTLDLNKVHSTVDEVELHTHLHCLSNQIAIEKKRT 128
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
L + + E Q WW P++ + +L + ++D
Sbjct: 129 KDLNHLAKAAEDQ-FWWARPIESMTDSQLDKYKKMLEDF 166
>gi|414884046|tpg|DAA60060.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 268
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+K+EMK IENE+ R + FSKR G++KKASE+ + PS+
Sbjct: 3 RKKMEMKPIENEEARQVCFSKRRQGLFKKASELSILCGATVGSVVFSTSGRSYSFGHPSI 62
Query: 53 KAIANRFL------GMSQLHNDNIHPLVKAYSHA---RINELNQQHNDLLRQLDEEKEQQ 103
+A+RFL G++ H S A ++ LN ++ +L + LD EK+++
Sbjct: 63 NDVADRFLSSVAPGGLASGGASASHGGSGTTSGAVTDTVHRLNMEYLELQQSLDSEKKKK 122
Query: 104 NMLKQMRRVKETQPRWWET---PVDELNLQELLQM-------DSAVDDLHQTFLAKINEK 153
L++ KE R + V EL L EL ++ D AV + LA+ +
Sbjct: 123 ERLQEA-AAKEMGGRVMQCLNANVFELGLAELQELQKWLEAVDGAVKEKANRILAEARAR 181
Query: 154 TAAAAASSSVAPPM 167
A S PPM
Sbjct: 182 QTARGPSLVPQPPM 195
>gi|147838008|emb|CAN73790.1| hypothetical protein VITISV_025001 [Vitis vinifera]
Length = 223
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 32/157 (20%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
+K RQKIE++KIE ++ L+TFSKR +G++KKA E+ A
Sbjct: 9 RKNMGRQKIEIRKIEKKNSLLVTFSKRRTGLFKKAGELCVLCGVEAAVIVFSPXGRAFVF 68
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+ A+ +RFLG S A + H + RQ E +
Sbjct: 69 GHPTADAVIDRFLGRD----------TGTISRAVVPAEQVVHGQVQRQYLEP------VG 112
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
+ KE WW+ P++ + L EL Q +++ L +
Sbjct: 113 RAEXKKEEGGFWWDAPIENMGLNELEQFKGSLEKLRK 149
>gi|356534258|ref|XP_003535674.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 266
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK++ RQ+IE+KK+ N+ + +TFSKR SG++KKASE+ +
Sbjct: 7 KKSRGRQRIEIKKMSNDINLQVTFSKRRSGLFKKASELCTLCGANVALVVFSPGEKVFSF 66
Query: 48 CQPSVKAIANRFLGMS-QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
PSV + R+L N+H + A++ EL+ Q + QL+ E++ L
Sbjct: 67 GHPSVDGVIERYLKRGPPPEAGNMHYM------AKVIELHGQLTHINDQLEAERKHAEKL 120
Query: 107 KQMRRVKETQPRWWETPVDELNLQELLQ-MDSAVDDLHQ 144
+ ++ E Q WW PV+ + + E L+ + A ++L Q
Sbjct: 121 NRKQKEAEAQ-LWWARPVEGMIIMENLEKLKKAFEELKQ 158
>gi|357518951|ref|XP_003629764.1| MADS-box transcription factor [Medicago truncatula]
gi|355523786|gb|AET04240.1| MADS-box transcription factor [Medicago truncatula]
Length = 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMS 63
KK R+KIE+KK+E E ++ +TFSKR G+++KASE+ LC I F
Sbjct: 8 KKNTGRRKIEIKKLEKETNKQVTFSKRRQGLFRKASEL---CTLCDVHAAIIV--FSPAG 62
Query: 64 QLH---NDNIHPLVKAYSHARI--------------NELNQQHNDLLRQLDEEKEQQNML 106
+LH N ++ +Y + I E N+Q+ + L+ L+ EK++ +
Sbjct: 63 KLHCFGEPNTDQILNSYINGTIEFDVSNSTGNSSTYKEYNKQYEEALKVLEMEKQKLADV 122
Query: 107 KQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + ++ WW +DE+N +L + ++ +L + L K +E
Sbjct: 123 ENLTKIW-NMGNWWNESIDEMNSDQLEEFMESISELKRKLLEKADE 167
>gi|302807943|ref|XP_002985665.1| MADS-domain transcription factor [Selaginella moellendorffii]
gi|300146574|gb|EFJ13243.1| MADS-domain transcription factor [Selaginella moellendorffii]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN R + FSKR G+ KKASE+ +I LC V I A +
Sbjct: 3 RAKIEIKKIENRSARQVCFSKRRMGLIKKASEL--SI-LCGSEVGIIVFSQAGKAFSFGH 59
Query: 65 LHNDNI------HPL-VKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQP 117
D + P+ + +I +L +Q+N+LL++L+ E E+ +L++
Sbjct: 60 PCIDYVIDKTLKRPVQINCEKIEKIRQLEKQYNELLQELENETEKHTILQREFAGGGRGL 119
Query: 118 RWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYF--HN 171
+WWE V + ++EL Q +++ +++ + + A+ S P + HN
Sbjct: 120 QWWEEDVSGMGIEELKQHAESLEAMYRVVIERAKFLQIQASLVSYQLPSHFLGDHN 175
>gi|302826097|ref|XP_002994589.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
gi|300137367|gb|EFJ04345.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
Length = 205
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN R + FSKR G+ KKASE+ +I LC V I A +
Sbjct: 3 RAKIEIKKIENRSARQVCFSKRRMGLIKKASEL--SI-LCGSEVGIIVFSQAGKAFSFGH 59
Query: 65 LHNDNI------HPL-VKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQP 117
D + P+ + +I +L +Q+N+LL++L+ E E+ +L++
Sbjct: 60 PCIDYVIDKTLKRPVQINCEKIEKIRQLEKQYNELLQELENETEKHTILQREFAGGGRGL 119
Query: 118 RWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYF--HN 171
+WWE V + ++EL Q +++ +++ + + A+ S P + HN
Sbjct: 120 QWWEEDVSGMGIEELKQHAESLEAMYRVVIERAKFLQIQASLVSYQLPSHFLGDHN 175
>gi|297842962|ref|XP_002889362.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335204|gb|EFH65621.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 27/188 (14%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
MA K RR KIE+ K+ NE + +TFSKR SG++KKASE+ LC + I
Sbjct: 1 MARKNLGRR-KIEIVKMTNESNLQVTFSKRRSGLFKKASEL---CTLCDAEIAIIVFSPS 56
Query: 61 G-MSQLHNDNIHPLVKAYSHARINE----LNQQHNDLLRQLDEEKEQQNM---------- 105
G + + N++ L+ +S + + L++ H L Q+ E + M
Sbjct: 57 GKVYSFGHPNVNVLLDQFSERVLRQNNTNLDESHTKLHIQMLNESLTEAMAEKEKEQRKK 116
Query: 106 --LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQ------TFLAKINEKTAAA 157
L Q R + WW + ELNL +L M A++DL + + + N
Sbjct: 117 EWLVQNEREIKNVEEWWTNSLKELNLTQLTSMKHALEDLKKEVNERASLFHQSNSNFYVG 176
Query: 158 AASSSVAP 165
++S++ AP
Sbjct: 177 SSSNAAAP 184
>gi|356522444|ref|XP_003529856.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 7 KRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQ----------------- 49
KR++ IE+KK+E + R +TFSKR G++ K +E+ LCQ
Sbjct: 15 KRKRTIEIKKVEQINRRYVTFSKRKLGLFNKLTEL---SVLCQVEAAVIITSQNGKLYTC 71
Query: 50 --PSVKAIANRFL--GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P A+ R+L G+S+ + K I L ++ L EE+++
Sbjct: 72 GYPDADAVVRRYLSGGLSR----GLDSESKKRQQDAIETLRPEYEATQNHLKEEQKRLQE 127
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK---TAAAAASSS 162
+K+ R+ P WW P + + L++L Q ++++ L + + EK + + ++
Sbjct: 128 IKETRKSSLCFPSWWNLPTEGMGLEDLEQFKTSLERLKFNLVGALQEKQMNSVPSMPNAL 187
Query: 163 VAPPM 167
+ PPM
Sbjct: 188 MVPPM 192
>gi|356537280|ref|XP_003537157.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 178
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
KKTK RQKIEMKK+ NE + +TFSKR +G++KKASE+ +
Sbjct: 12 VAKKTKGRQKIEMKKMRNESNLQVTFSKRCTGVFKKASELATLCGVDVAVIMFSPDNQVF 71
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLV-----KAYSHARINELNQQHNDLLRQLDEEK 100
PSV ++ R+ PL+ K +S EL+ + L Q+ EK
Sbjct: 72 SFGSPSVDSVVQRY------KTQGPPPLLTLDLNKVHSTVDEVELHTHLHCLSNQIAIEK 125
Query: 101 EQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
++ L + + E Q WW P++ + +L + ++D
Sbjct: 126 KRTKDLNHLAKAAEDQ-FWWARPIESMTDSQLDKYKKMLEDF 166
>gi|297845922|ref|XP_002890842.1| hypothetical protein ARALYDRAFT_336095 [Arabidopsis lyrata subsp.
lyrata]
gi|297336684|gb|EFH67101.1| hypothetical protein ARALYDRAFT_336095 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 25/149 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEA 44
M KKTK +QKI +KKIE ++DRL+T SKR +GIY K SE+ +
Sbjct: 1 MNPKKTKGKQKITIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKP 60
Query: 45 IHLCQPSVKAIANRFL-GMSQLHNDNIH-PLVKAYSHARINELNQQHNDLLRQLDEEKEQ 102
PS +A+A RFL G S + ++ ++ A+ A+I EL + +N R +++ K +
Sbjct: 61 YTFGSPSFQAVAERFLNGESSSSSSSLQRSVMNAHQQAKIQELCKVYN---RMVEKAKAE 117
Query: 103 QNMLKQMRRVKETQP----RWWETPVDEL 127
+ +K+ + E P WW+ E+
Sbjct: 118 EVKVKKAAALAEKMPLNEDAWWKVDPKEV 146
>gi|225463450|ref|XP_002272654.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 222
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMS 63
+K R+KIE++KIE + +TFSKR +G++KKA E+ LC I G +
Sbjct: 9 RKNTGRKKIEIRKIEKKSSLEVTFSKRRAGLFKKAGEL---CVLCGAEAAVIVFSPGGRA 65
Query: 64 QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRR--VKETQPRWWE 121
+ V + R + + + Q+ + Q+ L+ + R VKE WW+
Sbjct: 66 FVFGHPTADAVIDHFLGRDTDTSSRGVVPAEQVVHGQVQRQYLEAVGRAEVKEEGGFWWD 125
Query: 122 TPVDELNLQELLQMDSAVDDLHQ---------TFLAKINEKTAAAAASSSV----APPMY 168
P++ + L EL Q +++ L + T + ++ ++ A +S+++ APP
Sbjct: 126 APIENMGLNELEQFKGSLEKLREKVADRVAEITLMMVMDSESGAGPSSTTMVEYAAPPQE 185
Query: 169 FHN 171
+++
Sbjct: 186 YNS 188
>gi|302768793|ref|XP_002967816.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
gi|300164554|gb|EFJ31163.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
Length = 210
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN R + FSKR G+ KKASE+ +I LC V I A +
Sbjct: 3 RAKIEIKKIENRSARQVCFSKRRMGLIKKASEL--SI-LCGSEVGIIVFSQAGKAFSFGH 59
Query: 65 LHNDNI------HPL-VKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ---MRRVKE 114
D + P+ V RI +L +Q+N+LL++L+ E E+ +L++
Sbjct: 60 PCIDYVIDKTLKRPVQVNCEKIERIRQLEKQYNELLQELENENEKHAILQREFAGGGGGG 119
Query: 115 TQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYFHN 171
+WWE V + ++EL Q +++ +++ + + A+ S P + +
Sbjct: 120 RGLQWWEEDVSGMGIEELKQHAESLEAMYRVVIERAKFLQVQASLVSYQLPSHFLGD 176
>gi|302799884|ref|XP_002981700.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
gi|300150532|gb|EFJ17182.1| type I MADS-domain transcription factor [Selaginella
moellendorffii]
Length = 210
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN R + FSKR G+ KKASE+ +I LC V I A +
Sbjct: 3 RAKIEIKKIENRSARQVCFSKRRMGLIKKASEL--SI-LCGSEVGIIVFSQAGKAFSFGH 59
Query: 65 LHNDNI------HPL-VKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ---MRRVKE 114
D + P+ V RI +L +Q+N+LL++L+ E E+ +L++
Sbjct: 60 PCIDYVIDKTLKRPVQVNCEKIERIRQLEKQYNELLQELENENEKHAILQREFAGGGGGG 119
Query: 115 TQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPMYFHN 171
+WWE V + ++EL Q +++ +++ + + A+ S P + +
Sbjct: 120 RGLQWWEEDVSGMGIEELKQHAESLEAMYRVVIERAKFLQVQASLVSYQLPSHFLGD 176
>gi|242080995|ref|XP_002445266.1| hypothetical protein SORBIDRAFT_07g007306 [Sorghum bicolor]
gi|241941616|gb|EES14761.1| hypothetical protein SORBIDRAFT_07g007306 [Sorghum bicolor]
Length = 242
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 26/126 (20%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
GK TK RQ+IEMK+I+ E+ R + FSKR ++KKASE+ + +
Sbjct: 4 GKSTKGRQRIEMKRIKGEEARQVCFSKRRPSLFKKASELSTLCGAEVAVVTFSPGGKCLS 63
Query: 47 LCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARIN------ELNQQHNDLLRQLDEEK 100
PS ++A+RFL L I + SH E+NQQ +L + ++ EK
Sbjct: 64 FGHPSTLSVADRFLAAHTLDGLTI----GSDSHGTQGLTGSSQEMNQQVMELQKLMETEK 119
Query: 101 EQQNML 106
++ ML
Sbjct: 120 RRKEML 125
>gi|15218647|ref|NP_176715.1| protein agamous-like 23 [Arabidopsis thaliana]
gi|3335343|gb|AAC27145.1| Contains similarity to gb|L46397 MADS box protein (ZAG3) from Zea
mays [Arabidopsis thaliana]
gi|32402424|gb|AAN52794.1| MADS-box protein AGL23 [Arabidopsis thaliana]
gi|332196244|gb|AEE34365.1| protein agamous-like 23 [Arabidopsis thaliana]
Length = 226
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KKT R+K+E+ K+ E + +TFSKR +G++KKASE +
Sbjct: 3 KKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+V + + F G HN+ L ++Y+ + LN+ + ++ ++++E++ +
Sbjct: 63 GHPNVDVLLDHFRGCVVGHNNT--NLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRA 120
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQT-------FLAKINEKTAAAAAS 160
Q R E WW ELNL + M + DL + + + N ++S
Sbjct: 121 QNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGSSS 180
Query: 161 SSVAP 165
++ AP
Sbjct: 181 NAAAP 185
>gi|449459362|ref|XP_004147415.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
gi|449500611|ref|XP_004161146.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 173
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 82/152 (53%), Gaps = 25/152 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+KIEMK +++ R +TFSKR +G++KKA+++ +A P+V
Sbjct: 3 RRKIEMKMVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNPNV 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ + +R+LG N N P V+ + + N++ DL++QL EK++ +++
Sbjct: 63 EEVVDRYLGCEWKANGN--PGVR--ERGMLEKENEELLDLVKQLQMEKKKGEIME----- 113
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQ 144
KE + R +++++L ELL++ +++ L +
Sbjct: 114 KEMKSRGELMKIEDMDLNELLKLKESLEKLRK 145
>gi|333408635|gb|AEF32138.1| MADS-box protein, partial [Betula platyphylla]
Length = 131
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM 109
PSV A+ +R L I +A+ + + +LN+Q++DLL QL+ EK++ L+QM
Sbjct: 1 PSVAAVIDRVGRPGMLDAATIRD-AEAHQESVLRDLNKQYSDLLNQLEAEKKRGEKLQQM 59
Query: 110 RRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
++ P W++ P +EL+ +EL +A+++L L ++ A A+A S P
Sbjct: 60 KKEYCQGPCWFDVPFNELSFEELQIQRAAMEELMGKLLKHTQQRLAQASAPSVTDP 115
>gi|356537232|ref|XP_003537133.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 178
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----AN 57
KKTK RQKIEMKK+ NE + +TFSK +G++KKASE+ LC V I +N
Sbjct: 12 VAKKTKGRQKIEMKKMRNESNLRVTFSKLRTGVFKKASEL---ATLCGMDVAVIMFSPSN 68
Query: 58 RFLGMSQLHNDNI---------HPLV-----KAYSHARINELNQQHNDLLRQLDEEKEQQ 103
R D++ PL+ K +S EL+ + L Q+ EK++
Sbjct: 69 RVFSFGSPSVDSVVQRYKTQGPPPLLTLDLNKVHSTVDEVELHAHLHCLSNQIAIEKKRT 128
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQEL 132
L + + E Q WW P++ + +L
Sbjct: 129 KDLNHLAKAAEDQ-FWWARPIESMTDSQL 156
>gi|356537248|ref|XP_003537141.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 178
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----AN 57
KKTK RQKIEMKK+ NE + +TFSKR +G++KKASE+ LC V I N
Sbjct: 12 VAKKTKGRQKIEMKKMRNESNLRVTFSKRRTGVFKKASEL---ATLCGVDVAVIMFSPGN 68
Query: 58 RFLGMSQLHNDNI---------HPLV-----KAYSHARINELNQQHNDLLRQLDEEKEQQ 103
R D + PL+ + +S EL+ + L Q+ EK++
Sbjct: 69 RVFSFGSPGVDYVVQRYKTQGPPPLLTLDLNEVHSTVDEVELHTHLHCLSNQIAIEKKRT 128
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQEL 132
L + + E Q WW P++ + +L
Sbjct: 129 KDLNHLVKAAEDQ-FWWARPIESMTDSQL 156
>gi|449463992|ref|XP_004149713.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
gi|449508317|ref|XP_004163280.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 187
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI---------------WEAIH-L 47
KK+ RQKIE+KK+ + R +TFSKR +G++ KA+E+ + I+
Sbjct: 2 KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+V + +RFL N P ++ + ELN+ D+ + + EK +
Sbjct: 62 GHPNVDFLIDRFL------TSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEK------R 109
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAPPM 167
+ R+++T WW+ ++ + +++L + S++ +L ++ E A P
Sbjct: 110 RAERMRKTGGFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPS 169
Query: 168 YFH 170
+ H
Sbjct: 170 FHH 172
>gi|3170464|gb|AAC42570.1| APETALA3 homolog PnPI-1 [Papaver nudicaule]
Length = 231
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + F +++
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRKNGILKKAKEI---TILCDAHVSLVI--FSSTGKMNEY 57
Query: 69 NIHPLVKA---YSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
PL+K Y A N+L + +H L ++D +KE NM ++R +K TP
Sbjct: 58 CSSPLIKQLDRYQKASGNKLWDAKHEYLSAEVDRVKKENDNMQIELRHLKGEDL----TP 113
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINE 152
LN +EL+ ++SA+DD AKI E
Sbjct: 114 ---LNPRELIPIESALDDGIVGVKAKIKE 139
>gi|356537244|ref|XP_003537139.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 178
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----AN 57
KKTK RQKIEMKK+ NE + +TFSKR + ++KKASE+ LC V I N
Sbjct: 12 VAKKTKGRQKIEMKKMRNESNLRVTFSKRRTRVFKKASEL---ATLCGVDVVVIMFSPGN 68
Query: 58 RFLGMSQLHNDNI---------HPLV-----KAYSHARINELNQQHNDLLRQLDEEKEQQ 103
R D++ PL+ K +S EL+ + L Q+ EK++
Sbjct: 69 RVFSFGSPSVDSVVQRYKTQGPPPLLTLDLNKVHSTVDEVELHTHLHYLSNQIAIEKKRT 128
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQEL 132
L + + E Q WW P++ + +L
Sbjct: 129 KDLNHLAKAAEDQ-FWWARPIESMTDSQL 156
>gi|356560196|ref|XP_003548380.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 254
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 7 KRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA----NRFLGM 62
K+R +IEMK++E + R +TFSKR G++ K +E+ LCQ I +F
Sbjct: 11 KKRGEIEMKEVEQRNRRHVTFSKRKLGLFNKLTEL---SVLCQVEAAVIITSQNGKFYSC 67
Query: 63 SQLHNDNI--HPLVKAYSHARINELNQQHNDLL--RQLDEEKEQQNMLKQMRRVKETQPR 118
D + L R N+ +DLL ++L+ E Q + ++ +R++E Q
Sbjct: 68 GYPDPDAVVRRYLTGGPPLRRNPADNRGQHDLLEKQRLEYEAIQNQLKEEKKRLEEIQGT 127
Query: 119 -----------WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS---SSVA 164
WW P +++ ++L Q ++++ L + + EK + S S+V
Sbjct: 128 RNNNGFFFAAPWWNLPAEDIGFEDLQQFKTSLECLKFNLIGALQEKQMNSVPSMQPSTVP 187
Query: 165 PPMYF 169
PPM +
Sbjct: 188 PPMPY 192
>gi|49388050|dbj|BAD25164.1| hypothetical protein [Oryza sativa Japonica Group]
gi|49388407|dbj|BAD25540.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 286
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
K+T+ RQ+IEMK IEN++ R + FSKR G++KKASE+ LC
Sbjct: 19 KRTRGRQRIEMKLIENKEARQVCFSKRREGVFKKASELSV---LCGARVAVVFFSPAGRP 75
Query: 49 ----QPSVKAIANRF-LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
PSV A+A+RF LG S A + E N+ L L ++
Sbjct: 76 HCFGHPSVSAVADRFLLGRSPADAAA---AAAEEEEAVVREFNRVEERLKDALGAAARRR 132
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAV 139
+ L + RV W + V L +L+ M +A+
Sbjct: 133 DALDEAARVAGV---WNDADVRRAGLADLVSMLAAL 165
>gi|356522442|ref|XP_003529855.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 287
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 7 KRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQ----------------- 49
KR++ IE+KK+E + R +TFSKR G++ K +E+ +I LCQ
Sbjct: 15 KRKRTIEIKKVEQINRRHVTFSKRKLGLFNKLTEL--SI-LCQVEAAVIITSQNGKLYTC 71
Query: 50 --PSVKAIANRFL--GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P A+ R+L G+ + + K I L ++ L EE+++
Sbjct: 72 GYPDADAVVRRYLNGGLPR----RLDSACKKRQQDAIETLRLEYEATQNHLKEEQKRLQE 127
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS---SS 162
+K+ R+ P WW P + + L++L Q ++++ L + + EK + S ++
Sbjct: 128 IKETRKSSLRFPSWWNLPTEGMGLEDLEQFKTSLERLKFNLVGALQEKQMNSVPSMPHAA 187
Query: 163 VAPPM 167
+ PPM
Sbjct: 188 MLPPM 192
>gi|358346445|ref|XP_003637278.1| Myocyte-specific enhancer factor 2A [Medicago truncatula]
gi|355503213|gb|AES84416.1| Myocyte-specific enhancer factor 2A [Medicago truncatula]
Length = 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 29/169 (17%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
KK RQKIE+KK+E + ++L+TFSKR G+++KASE+ LC
Sbjct: 8 KKNMGRQKIEIKKVEKDSNKLVTFSKRRQGLFRKASEL---CVLCDVHAAIIVFSPGDKL 64
Query: 49 ----QPSVKAIANRFL-GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
QP + N ++ G ++ + A + + N+Q+ + + L+ EK++
Sbjct: 65 YCFGQPDTNVVLNSYIKGTTEFEDSK-----SAENSPTCKDYNRQYEEAQKMLETEKKKL 119
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ + ++ + WW +D+++ +L Q ++ +L + + + +E
Sbjct: 120 EDVQNLAKIF-NKGDWWNDSIDDMSSDQLEQFMVSIYELRRKLVERADE 167
>gi|125581690|gb|EAZ22621.1| hypothetical protein OsJ_06292 [Oryza sativa Japonica Group]
Length = 194
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW-------------EAIHL-- 47
G+ + RQ+IE+++I+N++ R +TF+KR G++KKASE+ A H+
Sbjct: 6 GRTSMGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYA 65
Query: 48 -CQPSVKAIANRFLGMSQLHNDNIHPL-VKAYSHAR---INELNQQHNDLLRQLDEEKEQ 102
PSV A+ + + + P+ V S + L +D Q+ E +
Sbjct: 66 FGHPSVDAVLRSYASVPG-EAAAVAPVPVHGGSGGEDVDLLGLRLAADDTGAQVAAEHAR 124
Query: 103 -QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKIN 151
+++ ++ + K + WWE VD L ELL+ +A+ L F K N
Sbjct: 125 MRDVAARIVQAKAGRRFWWEADVDALGEAELLEFFTALKKLRDNFGGKAN 174
>gi|421957980|gb|AFX72867.1| MADS-box protein AGL74 [Aquilegia coerulea]
Length = 199
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K++ R+KI + KIE + R +TFSKR G++KKASE+ +
Sbjct: 13 KRSTGRKKIAIVKIERSERRQVTFSKRRMGLFKKASELCILCSAEIAILVSSPAGKVYTF 72
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELN-------QQH--NDLLRQLDE 98
P V+A +RFL Q +D+++ ++ + LN QQH N++ L++
Sbjct: 73 GHPCVEATLDRFLNQQQ--HDHMNHGGNNNNNINVGALNVSMQDQQQQHEYNEIASLLEK 130
Query: 99 EKEQQNMLKQMRR----VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKI 150
EK++ L+ +R+ WW+ P++ L L EL M + +++L + +K+
Sbjct: 131 EKKRGEALEYLRKGDWNGNYDYQFWWDAPIENLELHELNPMKTKLEELRKMVESKL 186
>gi|125580924|gb|EAZ21855.1| hypothetical protein OsJ_05502 [Oryza sativa Japonica Group]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
K+T+ RQ+IEMK IEN++ R + FSKR G++KKASE+ LC
Sbjct: 19 KRTRGRQRIEMKLIENKEARQVCFSKRREGVFKKASELSV---LCGARVAVVFFSPAGRP 75
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PSV A+A+RFL + + D + R LN+ L +++
Sbjct: 76 HCFGHPSVSAVADRFL-LGRSPADAAAAAAEEEEGGRARSLNRLEERLKDAFGAAARRRD 134
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAV 139
+ RV W + V L +L+ M +A+
Sbjct: 135 AFDEAARVAGV---WNDADVRRAGLADLVSMLAAL 166
>gi|288973089|gb|ADC79695.1| APETALA3-like protein [Euptelea pleiosperma]
gi|333952845|gb|AEG25812.1| APETALA3-like protein [Euptelea pleiosperma]
Length = 234
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I F S+ ++
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRSGIMKKAEEL---TVLCDAEVSLIM--FSNTSKF-SE 56
Query: 69 NIHP------LVKAYSHAR-INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P + Y H + IN N + +L L+++KE N L+ +E + R E
Sbjct: 57 YISPSTTTKGIFDRYQHVKGINLWNSHYERMLDNLNKQKEINNKLR-----REIRQRIGE 111
Query: 122 TPVDELNLQELLQMDSAVD 140
+++L++ EL ++ +D
Sbjct: 112 DHLNDLSIGELRGLEQNLD 130
>gi|126428413|gb|ABO13927.1| PISTILLATA-like protein [Papaver somniferum]
Length = 232
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + F +++
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRKNGILKKAREI---TVLCDADVSLVI--FSSTGKMNEY 57
Query: 69 NIHPLVKA---YSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
PL+K Y A N+L + +H L ++D +KE NM ++R +K TP
Sbjct: 58 CSSPLIKQLDRYQKASGNKLWDAKHEYLSAEVDRVKKENDNMQIELRHLKGEDL----TP 113
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINE 152
LN +EL+ +++A++D AKI E
Sbjct: 114 ---LNPRELIPIEAALEDGLVGVKAKIKE 139
>gi|125555178|gb|EAZ00784.1| hypothetical protein OsI_22811 [Oryza sativa Indica Group]
Length = 238
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 39/174 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEA----------------IHLCQPSV 52
++KIE+K+I+NE+ R + FSKR ++KKASE++ PSV
Sbjct: 3 KRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFGAPSV 62
Query: 53 KAIANRF-----------LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKE 101
+ +RF +G++ H+++ + +++ELNQQH +L QL + E
Sbjct: 63 GFVLSRFHATTTSRKHSSMGVTTQHDNS--------ATIKLHELNQQHIELQNQLQAQNE 114
Query: 102 QQNMLKQMRRVKETQPR---WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ L+++ + KE+ + W + V+++ ++L + ++ L IN+
Sbjct: 115 KMKALQEVAK-KESGGKVMGWLNSKVEDICQEDLEEFKMVLESLKYLTRGIINQ 167
>gi|316890754|gb|ADU56823.1| MADS-box protein FLC subfamily [Coffea arabica]
gi|339830664|gb|AEK20759.1| FLOWERING LOCUS C [Coffea arabica]
Length = 206
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 30/151 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+KKIE+++ R +TFSKR SG+ KKA E+ LC V + F G +L++
Sbjct: 3 RRKVEIKKIEDKNSRQVTFSKRRSGLMKKAKELS---VLCDVDVAVLI--FSGRGKLYDF 57
Query: 68 ---DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQ 116
+++ +++ Y ARI+ + +++ E +N++ +R++ E
Sbjct: 58 CSTNSLAKILQRYRNYAEAEDGSARISGVEKRN----------PEGRNVV-TIRKLLEKV 106
Query: 117 PRWWETP-VDELNLQELLQMDSAVDD-LHQT 145
R E P VD LNL EL+Q++ ++D L QT
Sbjct: 107 ERDLEEPDVDHLNLSELVQLEEQLEDALIQT 137
>gi|421957968|gb|AFX72861.1| MADS-box protein AGL68 [Aquilegia coerulea]
Length = 296
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 41/150 (27%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC------------- 48
+GKKT R+KI ++KIE +TFSKR +GI+KKA+E+ LC
Sbjct: 7 SGKKTTGRKKIAIEKIEIPKYLQVTFSKRTNGIFKKATELA---FLCGAHPFVLIFSPGG 63
Query: 49 ------QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ 102
PSV I N+FL ND I L Y NELN Q E E+
Sbjct: 64 KPHVFVHPSVDIIVNQFL------NDGIDGLAHRY-----NELNDQ--------VEVVEK 104
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQEL 132
Q K+ R K Q ++ELN ++
Sbjct: 105 QRCEKKNRNTKSPQYSLITCTLEELNCSKI 134
>gi|421957978|gb|AFX72866.1| MADS-box protein AGL73 [Aquilegia coerulea]
Length = 207
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 26/127 (20%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KKT R+KIE+KKIEN I FS+R ++KKASE+ +
Sbjct: 3 KKTAGRKKIEIKKIENTQALSIAFSRRRKSVFKKASELSTLCGAQTGVVVFSPGDKPFSF 62
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHP----LVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
QPSV A+ +R+L N N P +AY ARI + N+Q + Q + ++
Sbjct: 63 GQPSVSAVVDRYL------NGNNPPQDLSRFEAYRKARIQKFNEQGGVVQDQFESAVKRC 116
Query: 104 NMLKQMR 110
+ L +++
Sbjct: 117 DALTKIK 123
>gi|242080997|ref|XP_002445267.1| hypothetical protein SORBIDRAFT_07g007373 [Sorghum bicolor]
gi|241941617|gb|EES14762.1| hypothetical protein SORBIDRAFT_07g007373 [Sorghum bicolor]
Length = 242
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 34/160 (21%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------------WE 43
GK TK RQ+IEMK+I+ E+ R + FSKR ++KKASE+ W
Sbjct: 4 GKSTKGRQRIEMKRIKGEEARQVCFSKRRPSLFKKASELSTLCGAEVAVVTFSPGGKCWS 63
Query: 44 AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR------INELNQQHNDLLRQLD 97
H PS ++A+RFL L+ I + SH +E+NQQ +L + ++
Sbjct: 64 FGH---PSTLSVADRFLAEHTLNGLTI----GSESHGTQGLTGISHEMNQQVMELQQLME 116
Query: 98 EEKEQQNMLKQMRRVKETQP--RWWETPVDELNLQELLQM 135
EK ++ L + + P + V L + EL Q+
Sbjct: 117 TEKRRKEKLVEAMDRESGGPVMQLLNANVSALGIHELEQL 156
>gi|15238340|ref|NP_201311.1| K-box region and MADS-box transcription factor family protein
[Arabidopsis thaliana]
gi|8885580|dbj|BAA97510.1| MADS box transcription factor-like [Arabidopsis thaliana]
gi|29165401|gb|AAO65310.1| MADS affecting flowering 3 variant I [Arabidopsis thaliana]
gi|220961985|gb|ACL93409.1| MAF3 [Arabidopsis thaliana]
gi|220961994|gb|ACL93416.1| MAF3 [Arabidopsis thaliana]
gi|220962003|gb|ACL93423.1| MAF3 [Arabidopsis thaliana]
gi|220962028|gb|ACL93443.1| MAF3 [Arabidopsis thaliana]
gi|332010610|gb|AED97993.1| K-box region and MADS-box transcription factor family protein
[Arabidopsis thaliana]
Length = 196
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L+ LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DNVSVDSLISMEEQLETALSVIRAKKTE 137
>gi|220961980|gb|ACL93405.1| MAF3 [Arabidopsis thaliana]
gi|220961989|gb|ACL93412.1| MAF3 [Arabidopsis thaliana]
gi|220962018|gb|ACL93435.1| MAF3 [Arabidopsis thaliana]
Length = 196
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L+ LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DNVSVDSLISMEEQLETALSVIRAKKTE 137
>gi|50725502|dbj|BAD32972.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|54291184|dbj|BAD61881.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|125597086|gb|EAZ36866.1| hypothetical protein OsJ_21209 [Oryza sativa Japonica Group]
Length = 238
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 39/174 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEA----------------IHLCQPSV 52
++KIE+K+I+NE+ R + FSKR ++KKASE++ PSV
Sbjct: 3 KRKIEIKRIKNEEARQVCFSKRRPSVFKKASELYTVCGAEVAMLVKSPAGKFFSFGAPSV 62
Query: 53 KAIANRF-----------LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKE 101
+ +RF +G++ H+++ + +++ELNQQH +L QL + E
Sbjct: 63 GFVLSRFHATTTSRKHSSMGVTIQHDNS--------ATIKLHELNQQHIELQNQLQAQNE 114
Query: 102 QQNMLKQMRRVKETQPR---WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ L+++ + KE+ + W + V+++ ++L + ++ L IN+
Sbjct: 115 KMKALQEVAK-KESGGKVMGWLNSKVEDICQEDLEEFKMVLESLKYLTRGIINQ 167
>gi|220962023|gb|ACL93439.1| MAF3 [Arabidopsis thaliana]
Length = 196
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L+ LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DNVSVDSLISMEEQLETALSVIRAKKTE 137
>gi|449511623|ref|XP_004164009.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KKT RQKIE+KK+E + + +TFSKR +G++KKA E+ +
Sbjct: 10 KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ-QNML 106
P V + +R+L N+ P A S+ + E N+ D + + EK++ ++
Sbjct: 70 GHPDVDVLLDRYL------TGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELI 123
Query: 107 KQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
+ ++ WW+ V+ L L+EL SA+ DL ++ + TA
Sbjct: 124 RAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTA 172
>gi|220962013|gb|ACL93431.1| MAF3 [Arabidopsis thaliana]
Length = 193
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A L S D
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVAVSGLYDSA-SGD 58
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
N+ ++ Y H D L+ LD ++ +N L ++ Q + E+ VD ++
Sbjct: 59 NMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNVDNVS 110
Query: 129 LQELLQMDSAVDDLHQTFLAKINE 152
+ L+ M+ ++ AK E
Sbjct: 111 VDSLISMEEQLETALSVIRAKKTE 134
>gi|220962008|gb|ACL93427.1| MAF3 [Arabidopsis thaliana]
Length = 193
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A L S +D
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVAVSGLYDSA-SSD 58
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
N+ ++ Y H D L+ LD ++ +N L ++ Q + E+ VD ++
Sbjct: 59 NMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNVDNVS 110
Query: 129 LQELLQMDSAVDDLHQTFLAKINE 152
+ L+ M+ ++ AK E
Sbjct: 111 VDSLISMEEQLETALSVIRAKKTE 134
>gi|379133527|dbj|BAL70258.1| suppressor of overexpression of CONSTANS 1 [Rhododendron x
pulchrum]
Length = 203
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 12/137 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIEMK+IEN R +TFS+R +G+ KKA +E LC V I F +LH
Sbjct: 3 RGKIEMKRIENGTSRQVTFSRRRNGLLKKA---YELSVLCDAQVALII--FSPTGRLHEF 57
Query: 67 -NDNIHPLVKAYS-HARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+ N+H +++ Y HA+ + N + ++QL +E NM K+M ++ +Q +
Sbjct: 58 SSSNMHKIIERYCEHAKQAQTKNPEVEHYIQQLKQEA--ANMAKKMEILEASQRKILGHN 115
Query: 124 VDELNLQELLQMDSAVD 140
V +++EL ++D+ ++
Sbjct: 116 VASCSVEELRELDNQLE 132
>gi|356522440|ref|XP_003529854.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 284
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQ------------ 49
A + K+R KIE+K++E + R +TFSKR G++ K +E+ LCQ
Sbjct: 13 ATMQNKKRGKIEIKEVEQRNRRYVTFSKRKLGLFNKLTEL---SVLCQVETAVIITSQNG 69
Query: 50 -------PSVKAIANRFL-GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKE 101
P A+ R+L G L + +K + + ++ + QL EEK
Sbjct: 70 KLYSCGYPDPDAVVRRYLTGGPPLRRNRA---IKREQQEFVEQQRLEYEAVQNQLKEEK- 125
Query: 102 QQNMLKQMRRVKETQ--------PRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
K+++ +K TQ WW P + + L++L Q ++++ L + + EK
Sbjct: 126 -----KRLQEIKGTQNNNGFCFAAPWWNLPTEGMGLEDLEQFKTSLERLKFNLVGALQEK 180
Query: 154 TAAAAAS---SSVAPPM 167
+ S +++ PPM
Sbjct: 181 QMNSVPSMPHAAMLPPM 197
>gi|356574347|ref|XP_003555310.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Glycine max]
Length = 173
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 26/168 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASE------IWEAI--------HLC- 48
KK R+KIE+KK++ ++ +TFSKR +G++KKASE ++ AI C
Sbjct: 10 KKNTGRKKIEIKKLDKGSNKQVTFSKRRAGLFKKASELCILCNVYVAIIVFSPADKLFCF 69
Query: 49 -QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR---INELNQQHNDLLRQLDEEKEQQN 104
P + +I R+ L DN S + E N+Q+ + +++L E E++N
Sbjct: 70 GHPDIDSIIGRY-----LKGDNAEFESAKSSKGKSVSCEERNRQYEEAMKKL--ELEKKN 122
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + K WW+ P+D++ +L Q ++ +L + + E
Sbjct: 123 LAQIEVLTKGWNRSWWDDPIDQMTDLQLEQFMVSIYELRKKLAERAGE 170
>gi|449460287|ref|XP_004147877.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 225
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KKT RQKIE+KK+E + + +TFSKR +G++KKA E+ +
Sbjct: 10 KKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF 69
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ-QNML 106
P V + +R+L N+ P A S+ + E N+ D + + EK++ ++
Sbjct: 70 GHPDVDVLLDRYL------TGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELI 123
Query: 107 KQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
+ ++ WW+ V+ L L+EL SA+ DL ++ + TA
Sbjct: 124 RAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTA 172
>gi|357515937|ref|XP_003628257.1| Myocyte-specific enhancer factor [Medicago truncatula]
gi|355522279|gb|AET02733.1| Myocyte-specific enhancer factor [Medicago truncatula]
Length = 163
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 28/139 (20%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------Q 49
R+KIE+ ++ + R +TFSKR G++KKA+E+ AI LC
Sbjct: 3 RRKIEIAMVKKPEARQVTFSKRRMGLFKKANEL--AI-LCGTKIVIVVFSPGNKPYSFGH 59
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQ 108
PSV AIA++FL ND V + I +LNQQH ++ + E EKE + +
Sbjct: 60 PSVDAIASKFLQQELDLND-----VLETPSSNIEDLNQQHEKVMADIAEAEKEDKANEEM 114
Query: 109 MRRVKETQPRWWETPVDEL 127
++ K P+ W+ + EL
Sbjct: 115 LKEYKSASPKEWKDSLMEL 133
>gi|253760389|ref|XP_002488981.1| hypothetical protein SORBIDRAFT_0836s002010 [Sorghum bicolor]
gi|241947406|gb|EES20551.1| hypothetical protein SORBIDRAFT_0836s002010 [Sorghum bicolor]
Length = 182
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
GK TK RQ+IEMK I+ E+ R ++FSKR ++KKASE+
Sbjct: 6 GKSTKGRQRIEMKTIKGEEARQVSFSKRRPSLFKKASELSTLCGAEVAIVTFSPGGRCFS 65
Query: 47 LCQPSVKAIANRFL------GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
PS ++A+RFL G++ + + SH E+N Q +L + ++ EK
Sbjct: 66 FGHPSTLSVADRFLVEHTLDGLTIGSGSHGTQGLTGTSH----EMNHQVMELQQLMETEK 121
Query: 101 -EQQNMLKQMRRVKETQP---RWWETPVDELNLQEL 132
++ ++ M+R E+Q + V L LQEL
Sbjct: 122 RSKERAVEAMKR--ESQGPVMQLLNANVGALGLQEL 155
>gi|15233857|ref|NP_194185.1| MADS-box protein AGL24 [Arabidopsis thaliana]
gi|75220313|sp|O82794.1|AGL24_ARATH RecName: Full=MADS-box protein AGL24; AltName: Full=Protein
AGAMOUS-LIKE 24
gi|3719215|gb|AAC63139.1| MADS-box Protein [Arabidopsis thaliana]
gi|3719217|gb|AAC63140.1| MADS-box protein [Arabidopsis thaliana]
gi|4220536|emb|CAA23009.1| MADS-box protein AGL24 [Arabidopsis thaliana]
gi|7269304|emb|CAB79364.1| MADS-box protein AGL24 [Arabidopsis thaliana]
gi|92856619|gb|ABE77409.1| At4g24540 [Arabidopsis thaliana]
gi|225898809|dbj|BAH30535.1| hypothetical protein [Arabidopsis thaliana]
gi|332659522|gb|AEE84922.1| MADS-box protein AGL24 [Arabidopsis thaliana]
Length = 220
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 38/168 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI------------A 56
R+KI +KKI+N R +TFSKR GI+KKA E+ LC V I +
Sbjct: 3 REKIRIKKIDNITARQVTFSKRRRGIFKKADELS---VLCDADVALIIFSATGKLFEFSS 59
Query: 57 NR---FLGMSQLHNDNIHPLVKAYS-HARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+R LG LH NI+ L+ S H R+ N L +L +E E + KQ+R++
Sbjct: 60 SRMRDILGRYSLHASNINKLMDPPSTHLRLENCN------LSRLSKEVEDKT--KQLRKL 111
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
+ +D LNL+EL +++ L ++ L++++EK S
Sbjct: 112 RGED-------LDGLNLEELQRLEK----LLESGLSRVSEKKGECVMS 148
>gi|51849637|dbj|BAD42350.1| APETALA3-like protein [Cabomba caroliniana]
Length = 230
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+K+IEN +R +TFSKR +GI KKA E+ LC +V I N+F
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRAGIIKKAKEL---TVLCDANVSLILFSSTNKFFEYCS 59
Query: 65 LHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+ +V Y L + Q+ + ++L E KE+ L++ R + +
Sbjct: 60 -PTTTMKAMVDRYQQVSGTNLWDAQYESMQQKLAELKEKNEKLRKSIRQR------YGNE 112
Query: 124 VDELNLQELLQMDSAVDD----LHQTFLAKIN 151
+D L+ EL ++ + D + TF+AKI
Sbjct: 113 LDGLSYTELCGLEQNLSDALQKIRSTFVAKIG 144
>gi|242043398|ref|XP_002459570.1| hypothetical protein SORBIDRAFT_02g006730 [Sorghum bicolor]
gi|241922947|gb|EER96091.1| hypothetical protein SORBIDRAFT_02g006730 [Sorghum bicolor]
Length = 241
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSVKA 54
K E+K IENE+ R I F+KR ++ KASEI PS+
Sbjct: 3 KGEVKPIENEEQRQICFTKRRQSLFNKASEISILCGAMVGSIVFSTSGTPFSFGHPSIDD 62
Query: 55 IANRFLGMSQLHNDNIHPLVKAYSHA---RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
+A RFL + YS A I LN ++++L + L EKE++ ML++ +
Sbjct: 63 VAKRFLSSVISDGPSSSCARNDYSWAVPDTIQLLNMEYSELQQALVSEKEKKKMLQEATK 122
Query: 112 VKETQP--RWWETPVDELNLQELLQMDSAVDDLH 143
+ +P + T + EL+L+EL + +D +H
Sbjct: 123 KEMDEPMMQLLNTNISELSLEELQEFQKYLDAIH 156
>gi|357457941|ref|XP_003599251.1| MADS-box transcription factor [Medicago truncatula]
gi|355488299|gb|AES69502.1| MADS-box transcription factor [Medicago truncatula]
Length = 203
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAI 45
+G+K + RQKIEMKK+ NE + +TFSK SG++KK SE +
Sbjct: 3 SGRKVRGRQKIEMKKMNNERNLQVTFSKCRSGLFKKVSEFCTLCGVDVALVVFSPSQKVF 62
Query: 46 HLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V I +R+L N++ ++ + A++ LN + + L+E+K+ +
Sbjct: 63 SFGHPNVDTIIDRYLFRVPPQNNSTIEFIEPHRSAKVCALNAELIQINNTLNEKKKLGDE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
L + K + ++ V E L++L+ + + TF A+ + SS++
Sbjct: 123 LSLL--CKAARLELFKKIVME--LKKLVAHHVHRNAIQGTF-AQTFPFSVGNDLSSNI-- 175
Query: 166 PMYFHN 171
P+++HN
Sbjct: 176 PLHYHN 181
>gi|297794105|ref|XP_002864937.1| MADS-box protein AGL27-I [Arabidopsis lyrata subsp. lyrata]
gi|297310772|gb|EFH41196.1| MADS-box protein AGL27-I [Arabidopsis lyrata subsp. lyrata]
Length = 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ + G +L+N
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---VLCESSIAVLV--VSGSGKLYNS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y R +E L+ LD ++ +N L ++ Q + E V
Sbjct: 58 ASGDNMSKIIDRYEIQRADE--------LKALDLAEKIRNYLPHKELLEIVQSKLEEPNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DTVSVDSLISMEEQLETALSVIRAKKTE 137
>gi|242043400|ref|XP_002459571.1| hypothetical protein SORBIDRAFT_02g006750 [Sorghum bicolor]
gi|241922948|gb|EER96092.1| hypothetical protein SORBIDRAFT_02g006750 [Sorghum bicolor]
Length = 167
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 35/152 (23%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------Q 49
R+KIE+K IENE+ R + FSKR G++KKAS+I LC
Sbjct: 3 RRKIEIKPIENENTRQVCFSKRRQGLFKKASDIS---ILCGAMVGSVVFSSFGKSFSFGH 59
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYSH-------ARINELNQQHNDLLRQLDEEKEQ 102
PS+ +ANRFL S H+ P+ +H + LN ++ +L + LD +K++
Sbjct: 60 PSIDDVANRFL-YSVTHDG---PVSSGANHDNSLAVTGTVQGLNMEYLELQQSLDSQKKK 115
Query: 103 QNMLKQM--RRVKETQPRWWETPVDELNLQEL 132
+ L + + + E ++ + EL L EL
Sbjct: 116 KERLLEATKKEMGEHMMQFLNANILELGLDEL 147
>gi|372450331|gb|AEX92973.1| MADS box protein 7 [Agave tequilana]
Length = 192
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 15/146 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ + + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESEIAIVVFSSLGKMSEFCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N ++ +++ Y +L + +H +L ++D ++E NM ++RR+K
Sbjct: 60 PNTSLPKMLEKYQQHSGKKLWDAKHENLSAEIDRIKRENDNMQIELRRLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAK 149
++ LN +EL+ ++ A+ + + AK
Sbjct: 113 LNSLNPRELIPIEEALQNGVTSVRAK 138
>gi|357129453|ref|XP_003566376.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Brachypodium
distachyon]
Length = 187
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
M KKT ++ I +++IEN++ RL+TFSKR SG++KK SEI LC+ + +A
Sbjct: 7 MGEKKTAGKRSIRIQRIENKESRLVTFSKRKSGLWKKGSEI---AVLCRVRIALLAISEA 63
Query: 61 G-MSQLHNDNIHPLVKAYSHA----------RINELNQQHNDLLRQLDEEKEQQNMLKQM 109
G + + ++ ++ + A + L ++ +R++ E + + + +
Sbjct: 64 GKVFAFGSPSVDAVLGGDAGAVPADDGAGWEAVEALYRETEGKVREVAAESARMDAVGEK 123
Query: 110 RRVKETQPR---WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
R + Q W+E V+ L +EL A+ L + +I +AAA+
Sbjct: 124 VRQAQAQAGKRFWFEVDVEALGAEELPVFAMALQRLRENVGRRIEFCLHSAAAA 177
>gi|242043392|ref|XP_002459567.1| hypothetical protein SORBIDRAFT_02g006700 [Sorghum bicolor]
gi|241922944|gb|EER96088.1| hypothetical protein SORBIDRAFT_02g006700 [Sorghum bicolor]
Length = 246
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 41/155 (26%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------Q 49
R+KIE+K IENE+ R + FSKR G++KKASEI LC
Sbjct: 3 RRKIEIKPIENENARQVCFSKRRQGLFKKASEIS---ILCGAMVGSVVFSSFGKSFSFGH 59
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR----------INELNQQHNDLLRQLDEE 99
PS+ + NRFL + + P A S A + LN ++ +L + LD
Sbjct: 60 PSIDDVVNRFLNL-------VTPDGPASSGANHDNSLAVTGTVQGLNMEYLELQQSLDSL 112
Query: 100 KEQQNMLKQM--RRVKETQPRWWETPVDELNLQEL 132
K++ L++ + + E +W + EL L EL
Sbjct: 113 KKKNERLQEATKKEMGEHMMQWLNANILELGLDEL 147
>gi|29467046|dbj|BAC66962.1| MADS-box transcription factor PI [Agapanthus praecox]
Length = 210
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + G MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESQVSVVIFSSCGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N + +++ Y H +L + +H +L Q+D +KE NM ++R +K
Sbjct: 60 PNTSFPRILERYQHNCGKKLWDAKHENLNAQIDRVKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+++
Sbjct: 113 LNSLNPKELIPIEEALEN 130
>gi|224117988|ref|XP_002331530.1| predicted protein [Populus trichocarpa]
gi|222873754|gb|EEF10885.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 19/158 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K++ RQKIE+KKIEN+ +TF+KR G++ KASE+ +A
Sbjct: 7 KQSLGRQKIEIKKIENKSSLEVTFTKRRKGLFNKASELCILTGAEAAVIAFSPGKKAFAF 66
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
PSV + +R++ + +++ A H + E +Q+ + L + +EEK++ +K
Sbjct: 67 GFPSVDTVIDRYISENTEEGRSVN--TSASHHRVVQESRKQYAEALAKKEEEKKRVETMK 124
Query: 108 QMRRVKETQPR-WWETPVDELNLQELLQMDSAVDDLHQ 144
+ V + R WW+ ++++ L+EL + +++++L +
Sbjct: 125 EGGTVGFGRDRFWWDLSIEDMGLEELERYVASMEELKK 162
>gi|327420688|gb|AEA76417.1| putative GLO1 [Catharanthus roseus]
Length = 211
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 27/176 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEI---TVLCDAKVSLI---IFGTSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ AY A +L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTNLIDMLDAYQKATGKKLWDAKHENLSNEIDRVKKENDSMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDDL------HQTFLAKINEKTAAAAASSSVAPPMYFH 170
+ LN +EL+ ++ A+++ Q+ + KI K + P ++H
Sbjct: 113 ---ITSLNHKELMVLEDALENGISSIRDRQSEIVKIARKNGQILEEENKQLPYFWH 165
>gi|357129243|ref|XP_003566275.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Brachypodium
distachyon]
Length = 128
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 29/126 (23%)
Query: 10 QKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSVK 53
QKIE K+IEN+ R +TFSKR G++KKAS + +A PSV
Sbjct: 12 QKIETKRIENQQARQVTFSKRRFGLFKKASSLSVLCGVELAAVIFSPGGKAFSFGSPSVD 71
Query: 54 AIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
A+ NR + +N+N + ELN+ + +L ++EEK ++ ++ +K
Sbjct: 72 AVINRLIATFFANNNNA-----------LVELNKVYEELRAMMEEEKRRKERAEE--EMK 118
Query: 114 ETQPRW 119
+ RW
Sbjct: 119 RERSRW 124
>gi|8163952|gb|AAF73934.1|AF230705_1 MADS box transcription factor AP3 [Sagittaria montevidensis]
Length = 230
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 17/139 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+KKIEN +R +T+SKR +G+ KKA E+ LC + I G ++H
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRAGLIKKAEEL---TVLCDAQINLIL--ISGSRKVHHY 57
Query: 67 ---NDNIHPLVKAYSHARINELNQ-QHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ +IH ++ Y ++L Q Q+ + + L+ KE N L+ K+ + R E
Sbjct: 58 CSPSTDIHTVMDRYQQLTDSDLWQPQYEGMQKTLNHLKETNNNLR-----KQIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVDD 141
+++LN+ ELL ++ +D+
Sbjct: 112 DLEDLNMNELLALEREMDE 130
>gi|297738267|emb|CBI27468.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 22/102 (21%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC--------------- 48
+K+K RQ++EM K+ E + +TFSKR SG++KKASE+ LC
Sbjct: 5 RKSKGRQRVEMTKMAKESNLQVTFSKRRSGLFKKASELST---LCGAETAIIVFSPGKKV 61
Query: 49 ----QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELN 86
PSV++I +RFL + L N L +A+ + N
Sbjct: 62 YSFGHPSVESIVDRFLTRNPLTNAGTLQLFEAHRASNTTNTN 103
>gi|316890778|gb|ADU56835.1| MADS-box protein GLO subfamily [Coffea arabica]
Length = 210
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 25/155 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRTGIMKKAKEI---TVLCDAKVSLI---IFGTSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ AY + +L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTNLVEMLDAYQRSTGKKLWDAKHENLSNEIDRVKKENDSMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
+ LN +EL+ ++ A+++ LA + EK +
Sbjct: 113 ---ITSLNYKELMILEDALEN----GLAGLREKQS 140
>gi|316890776|gb|ADU56834.1| MADS-box protein GLO subfamily [Coffea arabica]
Length = 210
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENTNNRHVTYSKRKTGIMKKAKEI---TVLCDAKVSLI---IFGTSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ AY + +L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTNLVEMLDAYQRSTGKKLWDAKHENLSNEIDRVKKENDSMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 113 ---ITSLNYKELMVLEDALEN 130
>gi|52076728|dbj|BAD45640.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|125597356|gb|EAZ37136.1| hypothetical protein OsJ_21477 [Oryza sativa Japonica Group]
Length = 210
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
G+ + RQ+IE+++I+N R +TFSKR +G++KKASE+
Sbjct: 6 GRPSLGRQRIEIRRIDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFA 65
Query: 47 LCQPSVKAIANRF--LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
QP+V A+ RF L + + + D LR+ +E+ + Q
Sbjct: 66 FGQPTVDAVVRRFDPLHADGADPAPAAVEDGGGGGDDVVVADPEELDALRRAEEQTKAQV 125
Query: 105 MLKQ--MRRV--KETQPR-----WWETPVDELNLQELLQMDSAVDDLHQT 145
+Q MR V K TQ WWE V+ L EL + A++ L +
Sbjct: 126 AAEQARMRDVGDKVTQAMAGRALWWEADVEALGEAELPEFVRALERLRDS 175
>gi|297789459|ref|XP_002862694.1| hypothetical protein ARALYDRAFT_497339 [Arabidopsis lyrata subsp.
lyrata]
gi|297308367|gb|EFH38952.1| hypothetical protein ARALYDRAFT_497339 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+++IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L+N
Sbjct: 3 RRKVEIERIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVLA--VSGSGKLYNA 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y E++Q D L+ LD ++ +N L ++ Q + E V
Sbjct: 58 ASGDNMSKIIDRY------EIHQA--DELKALDLAEKIRNYLPHKEILEIVQSKLEEPNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DTVSVDSLISMEEQLETTLSVIRAKKTE 137
>gi|413917145|gb|AFW57077.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 252
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
K TK RQ+IEMK I+ E+ R + FSKR ++KKASE+ +
Sbjct: 6 KSTKGRQRIEMKCIQGEEARQVCFSKRRPSLFKKASELSTLCGAEVAVVTFSPGGKCFSF 65
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHAR------INELNQQHNDLLRQLDEEKE 101
PS ++ +RFL + L D+ + +R + +NQQ +L R ++ EK
Sbjct: 66 GHPSTSSVTDRFLAVHTL--DDGRAMASGSHGSRRGLTDTSHAMNQQLMELQRFMETEKR 123
Query: 102 QQNMLKQMRRVKETQPRWWETPVDEL 127
++ R E R PV +L
Sbjct: 124 RKE------RAMEAMVRESGGPVMQL 143
>gi|1067169|emb|CAA57311.1| floral binding protein number 7 [Petunia x hybrida]
Length = 225
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ + I G + + N
Sbjct: 3 RGKIEIKRIENNTNRQVTFCKRRNGLLKKA---YELSVLCEAEIALIVFSTRGRVYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N L ++E + + +Q++ ++ + + L
Sbjct: 60 NNIRAIIDRYKKATVETSNAFTTQELNAQFYQQESKKLRQQIQLIQNSNRHLVGEGLSSL 119
Query: 128 NLQELLQMDSAVD 140
N++EL Q+++ ++
Sbjct: 120 NVRELKQLENRLE 132
>gi|220962033|gb|ACL93447.1| MAF3 [Arabidopsis thaliana]
gi|220962038|gb|ACL93451.1| MAF3 [Arabidopsis thaliana]
gi|220962042|gb|ACL93454.1| MAF3 [Arabidopsis thaliana]
gi|220962046|gb|ACL93457.1| MAF3 [Arabidopsis thaliana]
Length = 196
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IE + R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIEKKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L+ LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYLPHKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
D +++ L+ M+ ++ AK E
Sbjct: 110 DNVSVDSLISMEEQLETALSVIRAKKTE 137
>gi|357117949|ref|XP_003560723.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Brachypodium
distachyon]
Length = 186
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHL---------------- 47
KKT ++ I +++IEN++ RL+TFSKR SG++KK SEI H+
Sbjct: 10 KKTAGKRSIRIQRIENKESRLVTFSKRKSGLWKKGSEIAVLCHVRVALLAFSEAGKVFAF 69
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAY---SHARINELNQQHNDLLRQLDE--EKEQ 102
PSV A+ G++ + V+A + +I E+ + + Q+D EK +
Sbjct: 70 GSPSVDAVLGDATGVAPADDGAEWEAVEALYRETEGKIKEVAAESS----QMDAVGEKVR 125
Query: 103 QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
Q +R W+E V+ L +EL A+ L +I +AAA
Sbjct: 126 QAQAGAGKRF------WFEVDVEALRAEELPVFAMALQRLRYNVGRRIESCLNSAAA 176
>gi|421957970|gb|AFX72862.1| MADS-box protein AGL69 [Aquilegia coerulea]
Length = 251
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 33/106 (31%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC------------- 48
+GKKT R+KI ++KIE +TFSKR +GI+KKA+E+ LC
Sbjct: 3 SGKKTTGRKKIAIEKIEIPKYLQVTFSKRTNGIFKKATELA---FLCGAHPFVLIFSPGG 59
Query: 49 ------QPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQ 88
PSV I N+FL ND I L Y NELN Q
Sbjct: 60 KPHVFVHPSVDVIVNQFL------NDGIDGLAHRY-----NELNDQ 94
>gi|37993006|gb|AAR06664.1| transcription factor AP3 [Chloranthus spicatus]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR GI KKA E+ LC V I + G +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGILKKAKELSV---LCDAQVSLIMSSSTGKFYEYCS 59
Query: 69 ---NIHPLVKAYSHAR-INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N + Y A IN N Q+ + ++ KE N L+ KE + R E +
Sbjct: 60 PATNTKKIFDRYQQASGINLWNSQYEKMQEYFEKLKETNNKLR-----KEIRQRRGE-DL 113
Query: 125 DELNLQELLQMDSAVDD 141
+ LN+ EL ++ +DD
Sbjct: 114 NGLNINELRSLEQNLDD 130
>gi|350538189|ref|NP_001234075.1| TPI [Solanum lycopersicum]
gi|110377320|gb|ABG73411.1| TPI [Solanum lycopersicum]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC+ V I F ++H
Sbjct: 3 RGKIEIKRIENTNNRQVTYSKRRNGIIKKAKEITV---LCEAKVSLII--FASSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ I ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 58 CSPSTTISDMLDGYQKASGRRLWDAKHGNLSNEIDRIKKENDSMQVKLRHLK-------G 110
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+++L +EL+ M+ A+ + + AK +E
Sbjct: 111 EDINQLTHKELIIMEEALQNGLSSISAKQSE 141
>gi|15290141|dbj|BAB63832.1| MADS-box protein-like [Oryza sativa Japonica Group]
gi|125529315|gb|EAY77429.1| hypothetical protein OsI_05425 [Oryza sativa Indica Group]
gi|125573501|gb|EAZ15016.1| hypothetical protein OsJ_04958 [Oryza sativa Japonica Group]
Length = 208
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
RQKIE+++IE+E+ R + FSKR +G +KKASE+ +A PSV
Sbjct: 17 RQKIEIRRIESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPSV 76
Query: 53 KAIANRFL--GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMR 110
+ + RFL S + ELN+Q+ +L ++ K ++ +
Sbjct: 77 ECLLERFLPDSSSGAAARVRRGANNNGGGGMVGELNRQYGELRAMVEAHKARRERADEKI 136
Query: 111 RVKETQPRWWETPVD--ELNLQELLQMDSAVDDLHQTFLAKINE 152
++ RW D ++ +EL+ + + + A+ ++
Sbjct: 137 EMERAAGRWLPMDADVRRMSPEELMAFGTGLMAVQAAVSARADQ 180
>gi|125747025|gb|ABN55897.1| GLOBOSA, partial [Eschscholzia californica]
Length = 217
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + G MS+ H+
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRKNGIIKKAKEI---TILCDAEVSLVIFSSTGKMSEFHS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
+ ++ Y A L + +H L ++D +KE NM ++R +K +
Sbjct: 60 SPLVKILDRYQKASGKRLWDAKHEYLSAEVDRIKKENDNMKIELRHLKGED-------LT 112
Query: 126 ELNLQELLQMDSAVDD 141
L+ +EL+ ++ A+++
Sbjct: 113 SLHPKELIPIEKALEN 128
>gi|30699235|ref|NP_177833.3| MADS transcription factor MAF1 [Arabidopsis thaliana]
gi|75308034|sp|Q9AT76.1|AGL27_ARATH RecName: Full=Agamous-like MADS-box protein AGL27; AltName:
Full=MADS box FLC1-like nuclear protein; AltName:
Full=Protein FLOWERING LOCUS M; AltName: Full=Protein
MADS AFFECTING FLOWERING 1
gi|13649969|gb|AAK37527.1|AF342808_1 MADS affecting flowering 1 [Arabidopsis thaliana]
gi|16580105|gb|AAK54440.1| MADS box FLC1-like nuclear protein [Arabidopsis thaliana]
gi|21617978|gb|AAM67028.1| MADS affecting flowering 1 [Arabidopsis thaliana]
gi|26450236|dbj|BAC42235.1| MADS affecting flowering 1 MAF1 [Arabidopsis thaliana]
gi|28416627|gb|AAO42844.1| At1g77080 [Arabidopsis thaliana]
gi|51968636|dbj|BAD43010.1| unnamed protein product [Arabidopsis thaliana]
gi|51970682|dbj|BAD44033.1| unnamed protein product [Arabidopsis thaliana]
gi|110735881|dbj|BAE99916.1| hypothetical protein [Arabidopsis thaliana]
gi|332197810|gb|AEE35931.1| MADS transcription factor MAF1 [Arabidopsis thaliana]
Length = 196
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+KIE+K+IEN+ R +TFSKR +G+ KA ++ LC+ SV + G
Sbjct: 3 RRKIEIKRIENKSSRQVTFSKRRNGLIDKARQLS---ILCESSVAVVVVSASGKLYDSSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
D+I ++ Y QH D LR LD E++ QN L ++ Q + E VD
Sbjct: 60 GDDISKIIDRYEI--------QHADELRALDLEEKIQNYLPHKELLETVQSKLEEPNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+ ++
Sbjct: 112 VSVDSLISLE 121
>gi|125747023|gb|ABN55896.1| DEFICIENS, partial [Eschscholzia californica]
Length = 228
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I + +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRAGIFKKALEL---TVLCDAQVSLI---IFSTTGKFAE 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL-LRQLDEEKEQQNMLKQ----MRRVKETQPRWWETP 123
I P S ++ + QQ +++ L + E+ Q+N+ KQ M+ KE + R E
Sbjct: 57 YISPTT---SQKKLFDRYQQTSEIDLWESHYEQLQENLKKQKEINMKLCKEIRMRTGEED 113
Query: 124 VDELNLQELLQMDSAVDD 141
+ EL+++EL ++ +++
Sbjct: 114 LSELSIEELCNLEQNLEN 131
>gi|8163966|gb|AAF73941.1|AF230712_1 MADS box containing protein PI [Sagittaria montevidensis]
Length = 208
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + G MS+ H+
Sbjct: 3 RGKIEIKRIENSANRQVTYSKRRNGIIKKAREISV---LCGCEVSLVIFSSSGKMSEFHS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+ +++ + + L +H L ++D +KE NM Q+R +K
Sbjct: 60 TTLSKILETFQQNQGQTLWGAKHESLKAEIDRMKKENDNMRIQLRHMK 107
>gi|410610199|gb|AFV74868.1| AP3-like protein [Balanophora fungosa]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 19/139 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R +I++KKIEN +R +T+SKR +G++KKA+E+ LC V I F G ++LH D
Sbjct: 3 RGEIQIKKIENATNRQVTYSKRKNGLFKKANELCV---LCDARVSIIM--FSGNNKLH-D 56
Query: 69 NIHPLV---KAYSH----ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P + Y H + I+ + + + R L E ++ N L + R +W
Sbjct: 57 YISPSTTTKQIYDHYQRSSGIDLWSSHYERMQRDLKELQDANNALHRETR------QWHG 110
Query: 122 TPVDELNLQELLQMDSAVD 140
+D+L++ EL ++ +D
Sbjct: 111 KSLDDLSMGELHGLEQDMD 129
>gi|125539021|gb|EAY85416.1| hypothetical protein OsI_06796 [Oryza sativa Indica Group]
Length = 194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGM 62
G+ + RQ+IE+++I+N++ R +TF+KR G++KKASE+ L SV + F
Sbjct: 6 GRTSMGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASEL---ALLTGASVAVVV--FSPA 60
Query: 63 SQLHNDNIHPLVKAY--SHARI-------------NELNQQHNDLLR-QLDEEKEQQNML 106
++ HP V A S+A + + DLL +L + +
Sbjct: 61 KHVYAFG-HPSVDAVLRSYASVPGEAAAVAPVPVHGGCGGEDVDLLGLRLAADDTGAQVA 119
Query: 107 KQMRRVKETQPR----------WWETPVDELNLQELLQMDSAVDDL 142
+ R+++ R WWE VD L ELL+ +A+ L
Sbjct: 120 AEHARMRDVAARIVQAKAGRRFWWEADVDALGEAELLEFFTALKKL 165
>gi|238479092|ref|NP_974160.2| MADS transcription factor MAF1 [Arabidopsis thaliana]
gi|11545545|gb|AAG37902.1| MADS-box protein AGL27-I [Arabidopsis thaliana]
gi|332197811|gb|AEE35932.1| MADS transcription factor MAF1 [Arabidopsis thaliana]
Length = 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+KIE+K+IEN+ R +TFSKR +G+ KA ++ LC+ SV + G
Sbjct: 3 RRKIEIKRIENKSSRQVTFSKRRNGLIDKARQLS---ILCESSVAVVVVSASGKLYDSSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
D+I ++ Y QH D LR LD E++ QN L ++ Q + E VD
Sbjct: 60 GDDISKIIDRYEI--------QHADELRALDLEEKIQNYLPHKELLETVQSKLEEPNVDN 111
Query: 127 LNLQELLQMDSAVD 140
+++ L+ ++ ++
Sbjct: 112 VSVDSLISLEEQLE 125
>gi|224113269|ref|XP_002332612.1| predicted protein [Populus trichocarpa]
gi|222832813|gb|EEE71290.1| predicted protein [Populus trichocarpa]
Length = 170
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+K+EMKKIE++ ++TF KR +G++KKASE +L + AI L +Q
Sbjct: 17 RKKVEMKKIESKSSLIVTFCKRRNGLFKKASEF---CNLYDDASLAIV--VLSPNQRPYS 71
Query: 69 NIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
HP V + + + + N++ E+ +N + +E + WWE V+++
Sbjct: 72 FGHPDVNTVVDQYLGDQESSERNNI--SCSEDTRGKNNMDCDNINEEGEGCWWERSVEDM 129
Query: 128 NLQELLQMDSAVDDL 142
NL+EL + ++++ L
Sbjct: 130 NLEELEKFRASLETL 144
>gi|297799552|ref|XP_002867660.1| hypothetical protein ARALYDRAFT_492389 [Arabidopsis lyrata subsp.
lyrata]
gi|297313496|gb|EFH43919.1| hypothetical protein ARALYDRAFT_492389 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 38/168 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI------------A 56
R+KI +KKI+N R +TFSKR GI+KKA E+ LC V I +
Sbjct: 3 REKIRIKKIDNITARQVTFSKRRRGIFKKADELS---VLCDADVALIIFSATGKLFEFSS 59
Query: 57 NR---FLGMSQLHNDNIHPLVKAYS-HARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+R LG LH NI+ L+ S H ++ N L +L +E E + KQ+R++
Sbjct: 60 SRMRDILGRYSLHASNINRLMDPPSTHLQLENCN------LSRLSKEVEDKT--KQLRKL 111
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
+ +D LNL+EL +++ L ++ L++++EK S
Sbjct: 112 RGED-------LDGLNLEELQRLEK----LLESGLSRVSEKKGECVMS 148
>gi|313929640|gb|ADR83606.1| PPI [Capsicum annuum]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 21/152 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGIIKKAREITV---LCDAKVSLI---IFGTSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YCSPSTTMSDILDGYQKASGRRLWDAKHENLSNEIDRIKKENDSMQVKLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ LN +EL+ M+ A+++ + AK +E
Sbjct: 110 GEDINSLNHKELMVMEEALENGLSSISAKQSE 141
>gi|449443690|ref|XP_004139610.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
gi|449505590|ref|XP_004162515.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
sativus]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
KK+ R+KIE+K+++ R +TFSKR G++ KA+E+ +
Sbjct: 2 KKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYTF 61
Query: 48 CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
P+V A+ +RFL N P A ++ + ELN + + EK+ +
Sbjct: 62 GHPNVDALLDRFL------TGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKK-----R 110
Query: 108 QMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAASSSVAP 165
+ R++ ++ WW+ ++ + + EL S++ L ++ + A V P
Sbjct: 111 AVERLRNSERFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTP 168
>gi|190183771|dbj|BAG48499.1| B-class MADS-box transcription factor [Cryptomeria japonica]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 23/140 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN +R +TFSKR G+ KKA E+ +I LC V I G + + N
Sbjct: 3 RGKIEIKKIENSTNRQVTFSKRRGGLIKKAQEL--SI-LCSAEVAVIIFSNTGKLCEFSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET----- 122
++ ++ Y + ++L + E QN+ +++R+KE R+
Sbjct: 60 SSMSKILGKYQKEKGSQL------------WDAEHQNLYNEIKRLKEENERFKSNLRHMK 107
Query: 123 --PVDELNLQELLQMDSAVD 140
V+ L L++L ++ A++
Sbjct: 108 GEDVNSLPLEDLCLLEQALE 127
>gi|77554761|gb|ABA97557.1| SRF-type transcription factor family protein, expressed [Oryza
sativa Japonica Group]
Length = 194
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW-------------EAIHL-- 47
G+ + RQ+IE+++I+N++ R +TF+KR G++KKASE+ A H+
Sbjct: 6 GRTSMGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYA 65
Query: 48 -CQPSVKAIANRFLGMSQLHNDNIHPL-VKAYSHAR---INELNQQHNDLLRQLDEEKEQ 102
PSV A+ + + + P+ V S + L +D Q+ E +
Sbjct: 66 FGHPSVDAVLRSYASVPG-EAAAVAPVPVHGGSGGEDVDLLGLRLAADDTGAQVAAEHAR 124
Query: 103 -QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
+++ ++ + K + WWE VD L ELL+ +A+ L
Sbjct: 125 MRDVAARIVQAKAGRRFWWEADVDALGEAELLEFFTALKKL 165
>gi|224135697|ref|XP_002327282.1| predicted protein [Populus trichocarpa]
gi|222835652|gb|EEE74087.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVSLIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI + Y + A I E+N Q+ ++E M +Q++ ++ +
Sbjct: 60 NNIRSTIDRYKKVSSDSSNTASITEINAQY--------YQQESAKMRQQIQLLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
V L+++EL Q+++ ++
Sbjct: 112 MGEAVSNLSVKELKQLENRLE 132
>gi|17933450|gb|AAK70215.1| MADS-box protein [Brassica napus]
gi|408369178|gb|AFU61562.1| flowering locus C [Brassica napus]
gi|408369195|gb|AFU61570.1| flowering locus C [Brassica napus]
gi|432138984|gb|AGB05432.1| FLC [Brassica napus]
gi|432138986|gb|AGB05433.1| FLC [Brassica napus]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|113015816|gb|ABI29999.1| flowering locus C1 [Brassica rapa subsp. pekinensis]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVEGKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|350274030|emb|CCC54332.1| MADS box protein, partial [Eschscholzia californica]
Length = 229
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 18/140 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I F ++ +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRAGIFKKAREL---TVLCDAEVSLII--FSSTGKV-TE 56
Query: 69 NIHP------LVKAYSHARINELNQQHNDLLRQ-LDEEKEQQNMLKQMRRVKETQPRWWE 121
I P L Y + +L + H + L++ L ++KE N L+ +E + R E
Sbjct: 57 YISPSISQKKLFDRYQQVQQIDLWESHYEQLQENLKKQKEVNNKLR-----REIRLRTGE 111
Query: 122 TPVDELNLQELLQMDSAVDD 141
+ ++EL+L EL ++ +++
Sbjct: 112 SDLNELSLDELRSLEQNLEN 131
>gi|356509369|ref|XP_003523422.1| PREDICTED: LOW QUALITY PROTEIN: floral homeotic protein PMADS
2-like [Glycine max]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G+S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---IFGVSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIELRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 110 GEDITSLNYKELMALEDALEN 130
>gi|351723069|ref|NP_001236242.1| uncharacterized protein LOC100306010 [Glycine max]
gi|255627269|gb|ACU13979.1| unknown [Glycine max]
Length = 181
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G+S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---IFGVSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPYTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 110 GEDITSLNYKELMALEDALEN 130
>gi|288973098|gb|ADC79696.1| APETALA3-like protein [Euptelea pleiosperma]
gi|333952847|gb|AEG25813.1| APETALA3-like protein [Euptelea pleiosperma]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F +L +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRAGIMKKAQEL---TVLCDAEVSLIM--FSNTGKLF-E 56
Query: 69 NIHP------LVKAYSHAR-INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P + Y HA+ IN N + + L+ +KE N L+ +E + R E
Sbjct: 57 FISPSTSTKKIFDRYQHAQGINLWNSHYERMQDNLNRQKEINNKLR-----REIRQRIGE 111
Query: 122 TPVDELNLQEL 132
+++LN+QEL
Sbjct: 112 -ELNDLNIQEL 121
>gi|56785938|gb|AAW29099.1| MADS box transcription factor PEAM1 [Pisum sativum]
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---LFGASGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRIQKENDSMQIELRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 110 GEDITSLNYKELMSLEDALEN 130
>gi|356564506|ref|XP_003550494.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 180
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 25 ITFSKRGSGIYKKASEI------WEAI--------HLC--QPSVKAIANRFLGMSQLHND 68
+TFSKR +G++KKASE+ + AI C P + +I R+L +N
Sbjct: 31 VTFSKRRTGLFKKASELCILCNAYVAIIVFSPADKLFCFGHPDIDSIIGRYLKGD--NNA 88
Query: 69 NIHPLVKAYSHARIN--ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
P K+ ++ E N+Q+ ++L E E++N+ + K RWW P+D+
Sbjct: 89 EFEPAAKSSKEKSVSYEECNRQYEAATKKL--ELEKKNLAQTEILAKGWNRRWWNDPIDQ 146
Query: 127 LNLQELLQMDSAVDDLHQTFLAKINEKTA 155
++ Q+L Q ++ +L + K+ E+T
Sbjct: 147 MSEQQLEQFMMSIYELRK----KLTERTG 171
>gi|89887326|gb|ABD78318.1| Glo-like protein [Primula vulgaris]
gi|89887330|gb|ABD78320.1| Glo protein [Primula vulgaris]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V + F ++H D
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGIIKKAKEIS---LLCDAQVSLVI--FANSGKMH-D 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
P ++ AY N L + +H +L +++ +KE NM ++R +K
Sbjct: 57 YCSPKTPLINILDAYQKQSGNRLWDAKHENLSNEIERVKKENDNMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDD 141
V L+ +EL+ ++SA+++
Sbjct: 113 ---VQSLHHKELMSIESALEN 130
>gi|332713905|gb|AEE98378.1| pistillata MADS-box protein [Paeonia suffruticosa]
Length = 211
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN ++R +TFSKR +GI KKA+EI LC V + G+ +
Sbjct: 3 RGKIEIKRIENSNNRQVTFSKRRTGILKKATEI---TVLCDAHVSLVIFSTSGIMHEYRS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + ++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTVIDILDRYHKQSTKKLWDPKHENLSNEVDRVKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
V LN++EL+ ++ +++
Sbjct: 113 VTSLNIKELMALEETLEN 130
>gi|297815716|ref|XP_002875741.1| hypothetical protein ARALYDRAFT_905731 [Arabidopsis lyrata subsp.
lyrata]
gi|297321579|gb|EFH52000.1| hypothetical protein ARALYDRAFT_905731 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 28/140 (20%)
Query: 1 MAGKKTKRRQKIEMKK-IENEDDRLITFSKRGSGIYKKASEI----------------WE 43
M+ KKTK R+KI +KK +E DR++T+S+R G K SE+ +
Sbjct: 1 MSPKKTKGRKKINLKKKVEKYQDRMVTYSRRQKGTNTKLSELSLLCGADVGFLVISCTGK 60
Query: 44 AIHLCQPSVKAIANRFL---GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEK 100
PS +A+A RFL G S L D H + ++ EL + +N L+ ++ E
Sbjct: 61 PYTFGNPSFEAVAKRFLNGEGSSLLQQDAQHKM-------KMEELYKVYNSLVEKIAAE- 112
Query: 101 EQQNMLKQMRRVKETQPRWW 120
E++ M+ + + WW
Sbjct: 113 EKKLMMAKAEALPFESNAWW 132
>gi|60100346|gb|AAX13300.1| MADS box protein PIb [Lotus japonicus]
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---IFGSSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDVLDRYQRASGKTLWDAEHENLSNEIDRVKKENDSMQIELRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ LN +EL+ ++ A+++ + K NE
Sbjct: 110 GDDITSLNYKELMALEEALENGLKGIREKKNE 141
>gi|320042911|gb|ADW08393.1| AGAMOUS MADS box factor transcription factor [Musa acuminata AAA
Group]
Length = 243
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
DNI ++ Y S I ++N QH ++E + Q++ ++
Sbjct: 60 DNIKSTIERYKKACADSSSSGAIVDVNSQHY-------YQQESAKLRHQIQILQNANRHL 112
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN++EL Q+++ ++
Sbjct: 113 MGDALSSLNVKELKQLENRLE 133
>gi|388514785|gb|AFK45454.1| unknown [Lotus japonicus]
Length = 181
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---IFGSSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRVKKENDSMQIELRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ LN +EL+ ++ A+++ + K NE
Sbjct: 110 GDDITSLNYKELMALEEALENGLKGIREKKNE 141
>gi|357137998|ref|XP_003570585.1| PREDICTED: MADS-box transcription factor 22-like [Brachypodium
distachyon]
Length = 229
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESSAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKADKPSLDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
+D L+++EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EELDGLSVEELQQLEKKLETGLHRVLQTKDQQFLEQINE 151
>gi|299893452|gb|ADJ57921.1| MADS affecting flowering 2 variant 4 [Arabidopsis thaliana]
gi|299893458|gb|ADJ57924.1| MADS affecting flowering 2 variant 2 [Arabidopsis thaliana]
gi|299893468|gb|ADJ57929.1| MADS affecting flowering 2 variant 2 [Arabidopsis thaliana]
Length = 186
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|225455667|ref|XP_002263450.1| PREDICTED: MADS-box protein SOC1-like [Vitis vinifera]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 14/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KI+M++IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKIQMRRIENATSRQVTFSKRRNGLLKKA---YELSVLCDAEVAVIIFSQKGRLYEFSS 59
Query: 68 DNIHPLVKAY-SHARINELN----QQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
N+ ++ Y HA+ E N +Q+ L+Q + ++M K++ ++ +Q +
Sbjct: 60 SNMQSAIERYREHAKQVETNNPELEQYMQNLKQ-----DAESMAKKIELLEVSQRKLLGQ 114
Query: 123 PVDELNLQELLQMDSAVD 140
+ +L E+L++DS ++
Sbjct: 115 GLSSCSLDEILEIDSQLE 132
>gi|220962012|gb|ACL93430.1| MAF2 [Arabidopsis thaliana]
gi|220962032|gb|ACL93446.1| MAF2 [Arabidopsis thaliana]
Length = 149
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|148734371|gb|ABR09364.1| APETALA3-like protein AP3-1.2 [Piper nigrum]
Length = 229
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANR---FLG 61
R K+EMK+IEN+ +R +TFSKR +G++KKA E+ LC + I NR +
Sbjct: 2 RGKMEMKRIENDTNRQVTFSKRRNGLFKKAQEL---TVLCDAQISIILISSTNRLYDYFS 58
Query: 62 MSQLHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
S H + Y R +L +++ ++ QL+E+ E+ N L+ KE +
Sbjct: 59 PSTSHK----KVYDRYQDVRKVDLWKKRYENMKHQLNEQSERNNRLR-----KEIRQHMG 109
Query: 121 ETPVDELNLQELLQMDSAVD 140
E +DEL+ ++L ++ V+
Sbjct: 110 E-ELDELSFEQLRGLEQRVE 128
>gi|148734369|gb|ABR09363.1| APETALA3-like protein AP3-1.1 [Piper nigrum]
Length = 229
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANR---FLG 61
R K+EMK+IEN+ +R +TFSKR +G++KKA E+ LC + I NR +
Sbjct: 2 RGKMEMKRIENDTNRQVTFSKRRNGLFKKAQEL---TVLCDAQISIILISSTNRLYDYFS 58
Query: 62 MSQLHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
S H + Y R +L +++ ++ QL+E+ E+ N L+ KE +
Sbjct: 59 PSTSHK----KVYDRYQDVRKMDLWKKRYENMKHQLNEQSERNNRLR-----KEIRQHMG 109
Query: 121 ETPVDELNLQELLQMDSAVD 140
E +DEL+ ++L ++ V+
Sbjct: 110 E-ELDELSFEQLRGLEHRVE 128
>gi|145334905|ref|NP_001078798.1| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
gi|11545549|gb|AAG37904.1| MADS-box protein AGL31 [Arabidopsis thaliana]
gi|332010608|gb|AED97991.1| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
Length = 178
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|242072968|ref|XP_002446420.1| hypothetical protein SORBIDRAFT_06g015640 [Sorghum bicolor]
gi|241937603|gb|EES10748.1| hypothetical protein SORBIDRAFT_06g015640 [Sorghum bicolor]
Length = 247
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 28/154 (18%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIH 46
GK TK RQ+IEMK I+ E+ R + FSKR ++KKA E+
Sbjct: 4 GKSTKGRQRIEMKSIKGEEARQVCFSKRRPCLFKKACELSTLCGAEVAVVTFSPGGRCFS 63
Query: 47 LCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
PS ++A+ FL L+ I ++ + N Q N + +L + E +
Sbjct: 64 FGHPSTLSVADSFLDEHTLNGLTIGS--GSHGTQELTGTNHQMNHQVMELQQLMEAEKRR 121
Query: 107 KQMRRVKETQPRWWETP--------VDELNLQEL 132
K+ R E R P V L LQEL
Sbjct: 122 KE--RAVEAMKRESRGPVMQLLNANVGALGLQEL 153
>gi|399950151|gb|AFP65760.1| AG-like protein [Iris fulva]
Length = 227
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSLLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
D++ ++ Y A I+ N + ++E + +Q+ +++++ + +
Sbjct: 60 DSVKATIERYKKACIDSSNNGNVSEANSQYYQQESSKLRQQIVQLQDSNRNLLGESLSAM 119
Query: 128 NLQELLQMDSAVD 140
N +EL Q++S ++
Sbjct: 120 NHRELRQLESKLE 132
>gi|408369180|gb|AFU61563.1| flowering locus C, partial [Brassica napus]
Length = 163
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R+K+E+K IEN+ R +TFSKR +G+ +KA ++ LC SV + A+R L S
Sbjct: 3 RKKLEIKPIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASRKL-YSFS 58
Query: 66 HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
DN+ ++ Y +QH D L+ LD + + + ++ + + E+ VD
Sbjct: 59 SGDNLVKILDRY--------GKQHGDDLKALDRQSKALDCGSHHELLELVESKLEESNVD 110
Query: 126 ELNLQELLQMD 136
+++ L+Q++
Sbjct: 111 NVSVGSLVQLE 121
>gi|15218663|ref|NP_174167.1| protein agamous-like 58 [Arabidopsis thaliana]
gi|6560765|gb|AAF16765.1|AC010155_18 F3M18.11 [Arabidopsis thaliana]
gi|332192857|gb|AEE30978.1| protein agamous-like 58 [Arabidopsis thaliana]
Length = 185
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC------------ 48
M KKTK +QKI +KKIE ++DR +T SKR + IY + I E LC
Sbjct: 1 MNPKKTKGKQKINIKKIEKDEDRSVTLSKRLNAIY---TMIIELSILCGVEVAFIGYSCS 57
Query: 49 -------QPSVKAIANRFLG--MSQLHNDNIHPLVK-AYSHARINELNQQHNDLLRQL-- 96
PS +A+ RFL S + ++ VK A+ A+I EL +++N L+ +L
Sbjct: 58 GKPYTFGSPSFQAVVERFLNGEASSSSSSSLQRSVKNAHKQAKIQELCKRYNRLVEELKV 117
Query: 97 DEEK-EQQNMLKQMRRVKETQPRWWET 122
DE K ++ L + R V + WW+
Sbjct: 118 DEVKVKKAAALAETRAV--NKDAWWKA 142
>gi|359806666|ref|NP_001241026.1| uncharacterized protein LOC100817554 [Glycine max]
gi|255638636|gb|ACU19623.1| unknown [Glycine max]
Length = 208
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 25/153 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H D
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEI---TVLCDAQVSLII--FAASGKMH-D 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P +++ Y L + +H +L +++ +KE +M ++R +K
Sbjct: 57 YISPSTTLIDILERYHKTSGKRLWDAKHENLNGEIERLKKENDSMQIELRHLKGDD---- 112
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ A++D +T L + EK
Sbjct: 113 ---INSLNYKELM----ALEDALETGLVSVREK 138
>gi|30681253|ref|NP_849351.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
gi|17529110|gb|AAL38765.1| putative MADS-box protein AGL11 [Arabidopsis thaliana]
gi|22136706|gb|AAM91672.1| putative MADS-box protein AGL11 [Arabidopsis thaliana]
gi|332657416|gb|AEE82816.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
Length = 216
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 119
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 120 SVKELKQVENRLE 132
>gi|15235869|ref|NP_194026.1| agamous-like MADS-box protein AGL19 [Arabidopsis thaliana]
gi|12229640|sp|O82743.1|AGL19_ARATH RecName: Full=Agamous-like MADS-box protein AGL19
gi|11545543|gb|AAG37901.1|AF312664_1 MADS-box protein AGL19 [Arabidopsis thaliana]
gi|3292820|emb|CAA19810.1| putative MADS Box / AGL protein [Arabidopsis thaliana]
gi|7269142|emb|CAB79250.1| putative MADS Box / AGL protein [Arabidopsis thaliana]
gi|23296476|gb|AAN13066.1| putative MADS box AGL protein [Arabidopsis thaliana]
gi|332659284|gb|AEE84684.1| agamous-like MADS-box protein AGL19 [Arabidopsis thaliana]
Length = 219
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K EMK+IEN R +TFSKR +G+ KKA +E LC V + F S+L+
Sbjct: 3 RGKTEMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALVI--FSPRSKLYEF 57
Query: 67 -NDNIHPLVKAYSHARINELNQQH--NDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+ +I ++ Y RI E+ H ND +Q + E + K++ +++ ++ +
Sbjct: 58 SSSSIAATIERYQR-RIKEIGNNHKRNDNSQQARD--ETSGLTKKIEQLEISKRKLLGEG 114
Query: 124 VDELNLQELLQMDSAVD 140
+D +++EL Q+++ +D
Sbjct: 115 IDACSIEELQQLENQLD 131
>gi|409187981|gb|AFV28901.1| flowering locus C protein [Capsella rubella]
Length = 198
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N + + + E+ V
Sbjct: 60 GDNLVKILDRY--------GKQHADGLKALDLQSKSLNYGSHHELLDLVESKLVESNVSN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVDSLVQLE 121
>gi|297799714|ref|XP_002867741.1| hypothetical protein ARALYDRAFT_492570 [Arabidopsis lyrata subsp.
lyrata]
gi|297313577|gb|EFH44000.1| hypothetical protein ARALYDRAFT_492570 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K EMK+IEN R +TFSKR +G+ KKA +E LC V + F S+L+
Sbjct: 3 RGKTEMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALVI--FSPRSKLYEF 57
Query: 67 -NDNIHPLVKAYSHARINE--LNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+ +I ++ Y RI E +N + ND +Q + E + K++ +++ ++ +
Sbjct: 58 SSSSIAKTIERYQR-RIKEIGINHKRNDNSQQARD--ETSGLTKKIEQLETSKRKLLGEG 114
Query: 124 VDELNLQELLQMDSAVD 140
+D +++EL Q+++ +D
Sbjct: 115 IDACSIEELQQLENQLD 131
>gi|189214305|gb|ACD85087.1| B-class MADS-box protein PI-1 [Anoectochilus formosanus]
Length = 209
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGIIKKAREIS---VLCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKILEKYQQNSGKKLWDATHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|189214335|gb|ACD85102.1| B-class MADS-box protein PI-1 [Habenaria petelotii]
Length = 209
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGIIKKAREIS---VLCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKILEKYQQNSGKKLWDATHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|409187977|gb|AFV28899.1| flowering locus C protein [Capsella rubella]
gi|409187979|gb|AFV28900.1| flowering locus C protein [Capsella rubella]
gi|409187983|gb|AFV28902.1| flowering locus C protein [Capsella rubella]
gi|409187985|gb|AFV28903.1| flowering locus C protein [Capsella rubella]
gi|409187987|gb|AFV28904.1| flowering locus C protein [Capsella rubella]
gi|409187989|gb|AFV28905.1| flowering locus C protein [Capsella rubella]
gi|409187991|gb|AFV28906.1| flowering locus C protein [Capsella rubella]
gi|409187993|gb|AFV28907.1| flowering locus C protein [Capsella rubella]
gi|409187995|gb|AFV28908.1| flowering locus C protein [Capsella rubella]
gi|409187997|gb|AFV28909.1| flowering locus C protein [Capsella rubella]
gi|409187999|gb|AFV28910.1| flowering locus C protein [Capsella rubella]
gi|409188001|gb|AFV28911.1| flowering locus C protein [Capsella rubella]
gi|409188003|gb|AFV28912.1| flowering locus C protein [Capsella rubella]
gi|409188005|gb|AFV28913.1| flowering locus C protein [Capsella rubella]
gi|409188008|gb|AFV28914.1| flowering locus C protein [Capsella rubella]
gi|409188010|gb|AFV28915.1| flowering locus C protein [Capsella rubella]
gi|409188012|gb|AFV28916.1| flowering locus C protein [Capsella rubella]
gi|409188014|gb|AFV28917.1| flowering locus C protein [Capsella rubella]
Length = 198
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N + + + E+ V
Sbjct: 60 GDNLVKILDRY--------GKQHADGLKALDLQSKSLNYGSHHELLDLVESKLVESNVSN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVDSLVQLE 121
>gi|168028736|ref|XP_001766883.1| type I MADS-domain protein PPTIM3 [Physcomitrella patens subsp.
patens]
gi|162681862|gb|EDQ68285.1| type I MADS-domain protein PPTIM3 [Physcomitrella patens subsp.
patens]
Length = 296
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R KIE+KKIEN R + FSKR G+ KKASE+ +A PS+
Sbjct: 3 RAKIEIKKIENSSARQVCFSKRRGGLIKKASELSILCGSEVGVIVFSQAGKAFSFGHPSI 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHND---LLRQLDEEKEQQNMLKQM 109
+ ++ L +L + + V + ++ ++ + L + L E+E Q+ L
Sbjct: 63 DYVIDKTLS-GELSDSDSGTAVTDVASQKVQQVQALQHQQKLLTKLLASERELQHRLL-- 119
Query: 110 RRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFL 147
+ P WW+ P+ + QEL +D +++ +
Sbjct: 120 -----SYPFWWQKPLTNYSPQELQHQGQRLDGIYEMLM 152
>gi|384096588|gb|AFH66789.1| PI-like MADS-box protein [Narcissus tazetta var. chinensis]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 15/146 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R +IE+K+IEN +R +TFSKR +GI KKA EI LC+ + + LG MS+
Sbjct: 3 RGRIEIKRIENSTNRQVTFSKRRNGIVKKAKEISV---LCESEIGIVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N ++ L++ Y +L + +H L ++D ++E ++M ++R +K
Sbjct: 60 PNSSLSTLLEKYQQHSGKKLWDAKHEKLSAEIDRIKRENESMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAK 149
++ LN +EL+ ++ A+ + + AK
Sbjct: 113 LNSLNPRELIPIEEALQNGVASVRAK 138
>gi|316890770|gb|ADU56831.1| MADS-box protein AG subfamily [Coffea arabica]
Length = 242
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSNRGRLYEY 73
Query: 67 -NDNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQP 117
N+++ +K Y + I+E N QH ++E + Q+ ++ +
Sbjct: 74 ANNSVKETIKRYKTVNSDSANTGSISEANAQH--------YQQEASKLRAQISNLQNSNR 125
Query: 118 RWWETPVDELNLQELLQMDSAVD 140
+ LNL+EL ++S V+
Sbjct: 126 NMLGESLGSLNLRELKNIESKVE 148
>gi|1568513|emb|CAA57445.1| fbp11 [Petunia x hybrida]
Length = 228
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I G + + N
Sbjct: 3 RGKIEIKRIENNTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIVFSTRGRVYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A N L ++E + + +Q++ ++ T + L
Sbjct: 60 NNIKGTIERYKKATAETSNACTTQELNAQFYQQESKKLRQQIQLLQNTNRHLVGEGLSAL 119
Query: 128 NLQELLQMDSAVD 140
N++EL Q+++ ++
Sbjct: 120 NVRELKQLENRLE 132
>gi|269314025|gb|ACZ36915.1| MADS-box transcription factor 2 [Hevea brasiliensis]
Length = 217
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALIVFSPRGKLYEFAN 59
Query: 68 DNIHPLVKAY-SHARINELNQQHND----LLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
++ ++ Y H + N+++++ +D LL+ E NM+K++ ++ ++ +
Sbjct: 60 SSMQETIERYRRHVKDNQIDEKKSDENMELLKT-----EAANMVKKIELLEISKRKLLGE 114
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+D ++EL Q++ ++ + A+ N+
Sbjct: 115 GLDSCTVEELQQIEQQLERSVSSIRARKNQ 144
>gi|351727901|ref|NP_001235385.1| uncharacterized protein LOC100499997 [Glycine max]
gi|255628409|gb|ACU14549.1| unknown [Glycine max]
Length = 208
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 29/155 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H D
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEI---TVLCDAQVSLII--FAASGKMH-D 56
Query: 69 NIHP------LVKAY---SHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPR 118
I P +++ Y S RI + +H +L +++ +KE +M ++R +K
Sbjct: 57 YISPSTTLIDILERYQKTSGKRI--WDAKHENLNGEIERLKKENDSMQIELRHLKGED-- 112
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ A++D +T L + EK
Sbjct: 113 -----INSLNYKELM----ALEDALETGLVSVREK 138
>gi|189099163|gb|ACD76823.1| SEEDSTICK-like protein [Capsella bursa-pastoris]
Length = 230
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSAL 119
Query: 128 NLQELLQMDSAVDDL--------HQTFLAKI 150
+++EL Q+++ ++ H+ LA+I
Sbjct: 120 SVKELKQVENRLEKAISRIRSKKHELLLAEI 150
>gi|58429217|gb|AAW78035.1| APETALA3-like protein [Thalictrum dioicum]
Length = 226
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----EAIHLCQPSVKAIANRFLGMSQ 64
R KIE+KKIEN +R +TFSKR +GI KKA E+ + L S + ++ S
Sbjct: 3 RGKIEIKKIENITNRQVTFSKRRAGIVKKAKELTVLCDAEVSLLMVSSTGKIHEYISPSS 62
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQ-LDEEKEQQNMLKQMRRVKETQPRWWETP 123
H + + Y A L Q H + +++ L + KE N L+ KE + R E
Sbjct: 63 THKN----IYDRYQQASGTNLWQPHYERMQETLQKLKETNNKLR-----KEIRQRNGE-D 112
Query: 124 VDELNLQELLQMD 136
+DELN Q+L ++
Sbjct: 113 LDELNFQQLCGLE 125
>gi|297740754|emb|CBI30936.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 26/158 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EA 44
M K++ RQKIE+KKIE + +TFSKR +G++KKA E+ A
Sbjct: 1 MVKKQSMGRQKIEIKKIEKKSSLEVTFSKRRTGLFKKAGELCVLCGAEAAVIVFSPGRRA 60
Query: 45 IHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
PS A+ +RFL + ++ + P + + H + +Q+ + L +L+ +KEQ+
Sbjct: 61 FVFGHPSADAVIDRFL-HRETNSRALVPAGQVHGH-----VQRQYLEALGRLEVKKEQEE 114
Query: 105 MLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
+ WW+ P++ + L EL Q ++++L
Sbjct: 115 TVGG----DGEGGFWWDAPIENMGLNELEQFRGSLEEL 148
>gi|126428409|gb|ABO13925.1| APETALA3-like protein [Papaver somniferum]
Length = 222
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-----MS 63
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I G +S
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGILKKAKEL---TVLCDAEVSLIMFSSTGKMTEYLS 59
Query: 64 QLHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
N N + Y + L N + L L+++KE + K++RR E + R E
Sbjct: 60 PSLNGNTKRVYDRYQQISGSSLWNSHYESLQNALNKQKE---INKRLRR--EIRQRMGE- 113
Query: 123 PVDELNLQELLQMDSAVD 140
+DEL + EL +++ ++
Sbjct: 114 DLDELTIDELRNLEANLE 131
>gi|51849641|dbj|BAD42352.1| APETALA3-like protein [Brasenia schreberi]
Length = 222
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+K+IEN +R +TFSKR +GI KKA E+ LC +V I N+F
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRAGIIKKAKELTV---LCDANVSLILFSSTNKFFEYCS 59
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N+ ++ Y A L H + + + E + ++ +V+++ + + +
Sbjct: 60 -PTTNMKAMIDRYQQATGTSLWDAHYESM-----QNELATLKEKSEKVRKSIRQRYGNEL 113
Query: 125 DELNLQELLQMDSAVDDLHQ 144
D L+ EL ++ ++D Q
Sbjct: 114 DGLSYTELCGLEQNLNDALQ 133
>gi|297813425|ref|XP_002874596.1| hypothetical protein ARALYDRAFT_489841 [Arabidopsis lyrata subsp.
lyrata]
gi|297320433|gb|EFH50855.1| hypothetical protein ARALYDRAFT_489841 [Arabidopsis lyrata subsp.
lyrata]
Length = 230
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGESLSSL 119
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 120 SVKELKQVENRLE 132
>gi|30698092|ref|NP_569005.2| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
gi|220961979|gb|ACL93404.1| MAF2 [Arabidopsis thaliana]
gi|220961984|gb|ACL93408.1| MAF2 [Arabidopsis thaliana]
gi|220961988|gb|ACL93411.1| MAF2 [Arabidopsis thaliana]
gi|220961993|gb|ACL93415.1| MAF2 [Arabidopsis thaliana]
gi|220961998|gb|ACL93419.1| MAF2 [Arabidopsis thaliana]
gi|220962017|gb|ACL93434.1| MAF2 [Arabidopsis thaliana]
gi|220962022|gb|ACL93438.1| MAF2 [Arabidopsis thaliana]
gi|220962037|gb|ACL93450.1| MAF2 [Arabidopsis thaliana]
gi|332010607|gb|AED97990.1| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
Length = 182
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|220962007|gb|ACL93426.1| MAF2 [Arabidopsis thaliana]
Length = 182
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|385889279|gb|AFI98666.1| MADS1 transcription factor [Calocedrus formosana]
Length = 203
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN +R +TFSKR SG++KKA EI +I LC V I G + +
Sbjct: 3 RGKIEIKKIENTTNRQVTFSKRRSGLFKKAKEI--SI-LCAADVGVIVFNSTGRLFDFAS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQL-DEEKEQQNMLKQMRRV 112
++ L++ Y +A N ++ +L Q + +KE + + K++ V
Sbjct: 60 SSMKRLLERYRNASGGRAWNNEYEQMLSQFRNLKKENEELQKELSCV 106
>gi|327442600|dbj|BAK09618.2| MADS-box transcription factor [Cyclamen persicum]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGIVKKAKEISV---LCDAQVSLVI--FASSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ ++ AY L + +H +L +++ +KE NM ++R +K
Sbjct: 58 VSPNSSLINILDAYQKQSGTRLWDAKHENLSNEIERIKKENDNMQNELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ L+ +EL+ ++ A+++
Sbjct: 113 --INSLHHKELMSIEDALEN 130
>gi|104162042|emb|CAJ77613.1| flowering protein [Brassica oleracea var. alboglabra]
Length = 197
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R+K+E+K IEN+ R +TFSKR +G+ +KA ++ LC SV + A+R L S
Sbjct: 3 RKKLEIKPIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASRKL-YSFS 58
Query: 66 HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
DN+ ++ Y +QH D L+ LD + + + ++ + + E+ VD
Sbjct: 59 SGDNLVKILDRY--------GKQHGDDLKALDRQSKALDCGSHHELLELVESKLEESNVD 110
Query: 126 ELNLQELLQMD 136
+++ L+Q++
Sbjct: 111 NVSVGSLVQLE 121
>gi|15234874|ref|NP_192734.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
gi|12229648|sp|Q38836.1|AGL11_ARATH RecName: Full=Agamous-like MADS-box protein AGL11; AltName:
Full=Protein SEEDSTICK
gi|862640|gb|AAC49080.1| MADS-box protein AGL11 [Arabidopsis thaliana]
gi|4538999|emb|CAB39620.1| MADS-box protein AGL11 [Arabidopsis thaliana]
gi|7267692|emb|CAB78119.1| MADS-box protein AGL11 [Arabidopsis thaliana]
gi|21592808|gb|AAM64757.1| MADS-box protein AGL11 [Arabidopsis thaliana]
gi|332657417|gb|AEE82817.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
Length = 230
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 119
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 120 SVKELKQVENRLE 132
>gi|408369197|gb|AFU61571.1| flowering locus C [Brassica napus]
Length = 197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R+K+E+K IEN+ R +TFSKR +G+ +KA ++ LC SV + A+R L S
Sbjct: 3 RKKLEIKPIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASRKL-YSFS 58
Query: 66 HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
DN+ ++ Y +QH D L+ LD + + + ++ + + E+ VD
Sbjct: 59 SGDNLVKILDRY--------GKQHGDDLKALDRQSKALDCGSHHELLELVESKLEESNVD 110
Query: 126 ELNLQELLQMD 136
+++ L+Q++
Sbjct: 111 NVSVGSLVQLE 121
>gi|63094569|gb|AAY30856.1| MADS-box transcription factor [Prunus dulcis]
Length = 221
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSILCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI ++ Y A I E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NNIRNTIEGYKKACSDSSGSTSITEINAQY--------YQQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L+++EL Q+++ ++
Sbjct: 112 MGDALSTLSVKELKQLENRLE 132
>gi|186532758|ref|NP_001119498.1| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
gi|59802935|sp|Q9FPN7.2|AGL31_ARATH RecName: Full=Agamous-like MADS-box protein AGL31; AltName:
Full=Protein MADS AFFECTING FLOWERING 2
gi|10177210|dbj|BAB10332.1| MADS box transcription factors-like protein [Arabidopsis thaliana]
gi|29165394|gb|AAO65307.1| MADS affecting flowering 2 variant I [Arabidopsis thaliana]
gi|32402386|gb|AAN52775.1| MADS-box protein AGL31-II [Arabidopsis thaliana]
gi|332010609|gb|AED97992.1| agamous-like MADS-box protein AGL31 [Arabidopsis thaliana]
Length = 196
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|417381837|gb|AFX61409.1| PISTILLATA-like MADS box protein [Allium cepa]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K IEN +R +TF+KR +GI KKA EI LC+ + + +G MS+
Sbjct: 3 RGKIEIKGIENSTNRQVTFAKRRNGIIKKAKEISV---LCESKIGIVVFSSMGKMSEYCS 59
Query: 67 -NDNIHPLVKAY-SHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N + L++ Y H + +H L ++D ++E NM ++R +K
Sbjct: 60 LNTSFPSLLEEYQQHPGKKIWDAKHEKLQAEIDRIKRENDNMQIELRHLKGDD------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ L +ELL +++A++D
Sbjct: 113 INSLQPKELLPIEAALED 130
>gi|334186427|ref|NP_001190696.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
gi|332657419|gb|AEE82819.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
Length = 234
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 119
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 120 SVKELKQVENRLE 132
>gi|302034467|gb|ADK92387.1| FLC [Eutrema wasabi]
Length = 197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHFDDLKALDLQSKALNYGSHHELLEVVESKLVESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L Q++
Sbjct: 112 VSVDFLAQLE 121
>gi|145332997|ref|NP_001078364.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
gi|332657418|gb|AEE82818.1| agamous-like MADS-box protein AGL11 [Arabidopsis thaliana]
Length = 256
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 29 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 85
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 86 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 145
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 146 SVKELKQVENRLE 158
>gi|317106689|dbj|BAJ53191.1| JMS09K11.9 [Jatropha curcas]
Length = 211
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRRAGIMKKAKEITV---LCDAQVSLVI--FASSGKMHEY 57
Query: 67 ----NDNIHPLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
I L K + HA + +H +L ++D +KE +M ++R +K
Sbjct: 58 CSPSTSLIEILDKYHKHAGKRIWDAKHENLSNEIDRIKKENDSMQIELRHMKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 113 --IASLNHKELMHIEEALEN 130
>gi|357168470|ref|XP_003581663.1| PREDICTED: MADS-box transcription factor 31-like [Brachypodium
distachyon]
Length = 249
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN R +TFSKR G+ KKA+E+ AI LC + + F G +++
Sbjct: 3 RGKVELKKIENTTSRQVTFSKRRMGLLKKANEL--AI-LCDAQIGVVI--FSGSGKMYEY 57
Query: 69 NIHP---------LVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+ P +KA S R +E++ Q ++ ++ K++ N LK + R ++
Sbjct: 58 SSPPWRITTIFDRYLKAPS-TRFDEMDIQQR-IIHEMTRMKDESNRLKIIMR------QY 109
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L LQ++L ++ +D
Sbjct: 110 MGEDLGSLTLQDVLNLEQQID 130
>gi|327391907|dbj|BAK09616.1| MADS-box transcription factor [Cyclamen persicum]
Length = 225
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+KKIEN +R +T+SKR +GI+KKA E+ A+ LC V I G + H
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRNGIFKKAQEL--AV-LCDAKVCIIM--LSGSGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
N + + Y +L H + Q+ + KE N LK +E + R +
Sbjct: 58 LSPNVTMKKMYDQYQKTLGTDLWISHHEKMQEQMRQLKEINNKLK-----REMRQRIGQD 112
Query: 123 PVDELNLQELLQMDSAVD 140
+D L++++L ++ +D
Sbjct: 113 NLDNLSMEQLQGLEKNID 130
>gi|300249738|gb|ADJ95380.1| AGAMOUS-like protein [Thalictrum clavatum]
Length = 222
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N + + + ++E + Q+ ++ + L
Sbjct: 60 NSVKKTIERYKKASTDSPNSGS---VSEANVQQEASKLRNQIASLQNHNRNLLGESLSNL 116
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL Q++ ++ AK NE
Sbjct: 117 NIRELKQIEKKIEGGISKIRAKKNE 141
>gi|224152533|ref|XP_002337248.1| predicted protein [Populus trichocarpa]
gi|222838615|gb|EEE76980.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
RQKIE+KK+E E +R +TFSKR +G++KKA+E+ LC + I
Sbjct: 2 RQKIEIKKVEKESNRYVTFSKRKNGLFKKATELST---LCGAEIAVIV 46
>gi|410610201|gb|AFV74869.1| AP3-like protein [Balanophora laxiflora]
Length = 245
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 19/139 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +T+SKR +G++KKA+E+ LC V I F G ++LH D
Sbjct: 3 RGKIQIKRIENATNRQVTYSKRKNGLFKKANEL---CVLCDARVSIIM--FSGNNKLH-D 56
Query: 69 NIHP------LVKAYSHARINELNQQHNDLLRQ-LDEEKEQQNMLKQMRRVKETQPRWWE 121
I P + Y +L H + ++Q L++ ++ N L + R +W
Sbjct: 57 YISPSTTTKQIYDHYQRTSGIDLWASHYERMQQDLNQLQDANNALHRETR------QWNG 110
Query: 122 TPVDELNLQELLQMDSAVD 140
+D+L++ EL ++ +D
Sbjct: 111 ESLDDLSMAELHGLEQEMD 129
>gi|124484517|dbj|BAF46355.1| MADS-box transcription factor [Alstroemeria ligtu subsp. ligtu]
Length = 210
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + G MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAQVSVVIFSSSGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y H +L + +H L ++D +KE NM ++R +K
Sbjct: 60 PSTSLPNILERYQHNSGKKLWDAKHESLHAEIDRIKKENDNMQIELRHLKGQD------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELMPIEDALQN 130
>gi|397310274|gb|AFO38187.1| AGAMOUS1 [Thalictrum thalictroides]
Length = 222
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N + + + ++E + Q+ ++ + L
Sbjct: 60 NSVKKTIERYKKASTDSPNSGS---VSEANVQQEASKLRNQIASLQNHNRNLLGESLSNL 116
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL Q++ ++ AK NE
Sbjct: 117 NIRELKQIEKKIEGGISKIRAKKNE 141
>gi|408369199|gb|AFU61572.1| flowering locus C [Brassica napus]
Length = 197
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R+K+E+K IEN+ R +TFSKR +G+ +KA ++ LC SV + A+R L S
Sbjct: 3 RKKLEIKPIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASRKL-YSFS 58
Query: 66 HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
DN+ ++ Y +QH D L+ LD + + + ++ + + E+ VD
Sbjct: 59 SGDNLVKILDRY--------GKQHGDDLKALDRQSKALDSGSHHELLELVESKLEESNVD 110
Query: 126 ELNLQELLQMD 136
+++ L+Q++
Sbjct: 111 NVSVGSLVQLE 121
>gi|189214365|gb|ACD85117.1| B-class MADS-box protein PI [Paphiopedilum hybrid cultivar]
Length = 210
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMSEYCS 59
Query: 68 --DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PATTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|282721245|gb|ADA83715.1| flowering locus C1 variant 2, partial [Brassica rapa var.
purpuraria]
Length = 193
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R + FSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|237701175|gb|ACR16048.1| GLOBOSA-like MADS-box transcription factor [Phragmipedium
longifolium]
Length = 210
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|242096094|ref|XP_002438537.1| hypothetical protein SORBIDRAFT_10g021663 [Sorghum bicolor]
gi|241916760|gb|EER89904.1| hypothetical protein SORBIDRAFT_10g021663 [Sorghum bicolor]
Length = 169
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 33/160 (20%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIH 46
G+ +K RQ+IE+++IE+ +TFSKR SG+ KKASE++ +A
Sbjct: 2 GRPSKGRQRIEIRRIEDAGRLEVTFSKRKSGLQKKASELFLLCGSPVALVVFSPGKKAFA 61
Query: 47 LCQPSVKAIANR------------FLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLR 94
L PSV + R L + Q +D +A + A + + + R
Sbjct: 62 LGTPSVDDVLRRHAPVPGEELDAKILAVLQDTDDASAVADRAEAEAIV---RRTEDTRAR 118
Query: 95 QLDEEKEQQNMLKQMRRVKETQPR--WWETPVDELNLQEL 132
E+ + K +R+ R WWE DEL EL
Sbjct: 119 SATEKARMDAIGKSVRQAAAKAGRKFWWEADSDELGEDEL 158
>gi|299893450|gb|ADJ57920.1| MADS affecting flowering 2 variant 3 [Arabidopsis thaliana]
Length = 253
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>gi|282721247|gb|ADA83716.1| nonfunctional flowering locus C1 variant 3 [Brassica rapa var.
purpuraria]
gi|282721251|gb|ADA83719.1| nonfunctional flowering locus C1 variant 3 [Brassica rapa var.
purpuraria]
Length = 172
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R + FSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|340373058|ref|XP_003385060.1| PREDICTED: hypothetical protein LOC100631776 [Amphimedon
queenslandica]
Length = 390
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KIEM+ I+N+ R TFSKR SGI KKA E+
Sbjct: 94 GKKTRGRVKIEMQYIQNKLRRYTTFSKRKSGIMKKAYEL 132
>gi|190183779|dbj|BAG48503.1| B-class MADS-box transcription factor [Cryptomeria japonica]
Length = 181
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN +R +TFSKR SG++KKA EI +I LC V I G + +
Sbjct: 3 RGKIEIKKIENTTNRQVTFSKRRSGLFKKAKEI--SI-LCAADVAVIVFNSTGRLFDFAS 59
Query: 68 DNIHPLVKAYSHARIN-ELNQQHNDLLRQLDEEKEQQNMLKQ 108
++ +++ Y +A N ++ +L Q +E+ L++
Sbjct: 60 SSMKRILERYRNASGGIAWNNEYKQMLSQFRNLREENEELRK 101
>gi|122938395|gb|ABM69043.1| MADS-box protein MADS5 [Gossypium hirsutum]
Length = 224
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI ++ Y A + E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NNIRSTIERYKKACSGTSNTNTVTEINAQYY--------QQESAKLRQQIQMLQNSSRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L ++EL Q+++ ++
Sbjct: 112 MGDSLSSLTVKELKQLENRLE 132
>gi|295913383|gb|ADG57944.1| transcription factor [Lycoris longituba]
Length = 213
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 15/143 (10%)
Query: 12 IEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH--ND 68
IE+K+IEN +R +TFSKR +GI KKA EI LC+ + + LG MS+ N
Sbjct: 18 IEIKRIENSTNRQVTFSKRRNGIVKKAKEISV---LCESEIGIVIFSSLGKMSEFCSPNT 74
Query: 69 NIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVDE 126
++ L++ Y +L + +H L ++D ++E NM ++R +K ++
Sbjct: 75 SLSTLLEKYQQHSGKKLWDAKHEKLSVEIDRIKRENDNMQIELRHLKGED-------LNS 127
Query: 127 LNLQELLQMDSAVDDLHQTFLAK 149
LN +EL+ ++ A+ + + AK
Sbjct: 128 LNPRELIPIEEALQNGVTSVRAK 150
>gi|89887332|gb|ABD78321.1| Glo protein [Primula vulgaris]
Length = 207
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +GI KKA EI LC V + G +
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGIIKKAKEISV---LCDAQVSLVIFANSGKMHEYCS 59
Query: 69 NIHPLVK---AYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
PL+ AY N L + +H +L +++ +KE NM ++R +K
Sbjct: 60 PKTPLINILDAYQKQSGNRLWDAKHENLSNEIERVKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
V L+ +EL+ ++SA+++
Sbjct: 113 VQSLHHKELMSIESALEN 130
>gi|282721250|gb|ADA83718.1| flowering locus C1 variant 2 [Brassica rapa var. purpuraria]
Length = 214
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R + FSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|350539569|ref|NP_001234194.1| TAGL11 transcription factor [Solanum lycopersicum]
gi|24967137|gb|AAM33102.2| TAGL11 transcription factor [Solanum lycopersicum]
Length = 223
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I G + + N
Sbjct: 3 RGKIEIKRIENNTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIVFSTRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+N+ ++ Y A + L ++E + + +Q++ ++ T + L
Sbjct: 60 NNVKATIERYKKATAETSSAYTTQELNAQFYQQESKKLRQQIQMMQNTNRHLVGEGLSSL 119
Query: 128 NLQELLQMDSAVD 140
N++EL Q+++ ++
Sbjct: 120 NVRELKQLENRLE 132
>gi|359487231|ref|XP_003633540.1| PREDICTED: LOW QUALITY PROTEIN: agamous-like MADS-box protein
AGL15-like [Vitis vinifera]
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN + R +TFSKR G+ KKASE+ AI LC V I F +L
Sbjct: 3 RGKIEIKKIENANSRQVTFSKRRVGLLKKASEL--AI-LCDAQVGVII--FSNTGKLFEF 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLR-QLDEEKEQQNMLK-QMRRVKETQPRWWETPVDE 126
+ + + S R N+L+ L+ + ++E ++ ++LK ++R+++ Q + +
Sbjct: 58 SSTSMKRIIS--RYNKLDSSEGALVEYKAEQEPKEVDILKDEIRKLQTRQLQLLGKDLSG 115
Query: 127 LNLQEL 132
L+L+EL
Sbjct: 116 LSLKEL 121
>gi|346223340|dbj|BAK78921.1| dormancy associated MADS-box 1 [Prunus mume]
Length = 235
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 23/142 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R+KI++KKI+N R +TFSKR GI+KKA+E+ LC+ V + G + +
Sbjct: 5 REKIKIKKIDNLPARQVTFSKRRRGIFKKAAELS---VLCESEVAVVIFSATGKLFDYSS 61
Query: 68 DNIHPLVKAYS---------HARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
++ +++ Y + R EL ++ + +R E KE+ L+QM+
Sbjct: 62 SSMKDVIERYQVHINGGEKFNERSIELQPEYENHIRLSKELKEKSRQLRQMK-------- 113
Query: 119 WWETPVDELNLQELLQMDSAVD 140
++ELN EL +++ VD
Sbjct: 114 --GEDLEELNFDELQKLEQLVD 133
>gi|218118120|dbj|BAH03321.1| MADS-box transcription factor [Habenaria radiata]
Length = 210
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEIS---VLCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
++ LN +EL+ ++ A+ Q LA + +K +
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLAGVRDKQS 140
>gi|4885036|gb|AAD22494.2|AF134115_1 PISTILLATA protein homolog HPI2 [Hyacinthus orientalis]
Length = 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ + + F ++++
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRLNGIIKKAKEISV---LCESEIAIVI--FSSLNKISDF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ +++ Y +L + +H +L ++D ++E NM ++RR+K
Sbjct: 58 CSPNTSLPKMLEKYQQHSGKKLWDAKHENLSAEIDRIKRENDNMQIELRRLKGDD----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+ +
Sbjct: 113 --LTSLNPRELIPIEEALQN 130
>gi|296085099|emb|CBI28594.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN + R +TFSKR G+ KKASE+ AI LC V I G + + +
Sbjct: 3 RGKIEIKKIENANSRQVTFSKRRVGLLKKASEL--AI-LCDAQVGVIIFSNTGKLFEFSS 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLR-QLDEEKEQQNMLK-QMRRVKETQPRWWETPVD 125
++ ++ Y N+L+ L+ + ++E ++ ++LK ++R+++ Q + +
Sbjct: 60 TSMKRIISRY-----NKLDSSEGALVEYKAEQEPKEVDILKDEIRKLQTRQLQLLGKDLS 114
Query: 126 ELNLQELLQMDSAVDD 141
L+L+EL ++ +++
Sbjct: 115 GLSLKELQNLEQQLNE 130
>gi|144678953|gb|ABP01802.1| MADS transcription factor AP3-3 [Aquilegia vulgaris]
Length = 221
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F +L ++
Sbjct: 3 RGKIEIKRIENTTNRQVTYSKRRTGIVKKAREL---TVLCDAEVSLIM--FSSTGKL-SE 56
Query: 69 NIHPLV---KAYSH----ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P K Y + IN N + + L ++KE MR +E + R E
Sbjct: 57 FISPSTTTKKIYDQYQQVSGINLWNSHYEKMQESLKKQKE-----TNMRLRREIRQRIGE 111
Query: 122 TPVDELNLQELLQMDSAVDD 141
+ D+++ EL ++ +D+
Sbjct: 112 SLDDDMSFDELRSLEQDLDE 131
>gi|409245033|gb|AFV33319.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245035|gb|AFV33320.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245037|gb|AFV33321.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245039|gb|AFV33322.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245041|gb|AFV33323.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245043|gb|AFV33324.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245045|gb|AFV33325.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|409245047|gb|AFV33326.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
Length = 196
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDMQSKALNYGSHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
++ + LLQ++
Sbjct: 112 VSAETLLQLE 121
>gi|217075556|gb|ACJ86138.1| unknown [Medicago truncatula]
Length = 227
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALIVFSPRGRLYEFAS 59
Query: 68 DNIHPLVKAY-SHARINELNQQHNDL--LRQLDEEKEQQNMLKQM 109
+I ++ Y SH RIN + +QL EE E NM+K++
Sbjct: 60 SSILETIERYRSHTRINNTPTTSESVENTQQLKEEAE--NMMKKI 102
>gi|197244659|dbj|BAG68951.1| PISTILLATA like protein [Hydrangea macrophylla]
Length = 212
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC SV I + G ++H
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRRNGILKKAKEITV---LCDASVSLIVSASSG--KMHEY 57
Query: 67 ----NDNIHPLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
I L K ++ + + +H +L ++D +KE NM ++R +K
Sbjct: 58 CSPKTTLIDILDKYHTQSGKRLWDAKHENLSNEIDRIKKENDNMQIELRHLK-------G 110
Query: 122 TPVDELNLQELLQMDSAVDD 141
V LN +EL+ ++ A+++
Sbjct: 111 EDVTSLNHKELMALELALEN 130
>gi|24636577|dbj|BAC22939.1| MADS box transcription factor [Triticum aestivum]
Length = 254
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I F G +L+
Sbjct: 24 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSGRGRLYEY 78
Query: 67 -NDNIHPLVKAY--------SHARINELNQQH 89
N+++ ++ Y S + E+N QH
Sbjct: 79 SNNSVKATIERYKKATSDTSSAGTVAEINAQH 110
>gi|4885034|gb|AAD22493.2|AF134114_1 PISTILLATA protein homolog MADS2 [Hyacinthus orientalis]
Length = 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ + + L MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAKEISV---LCESEIAIVVFSSLSKMSEFCS 59
Query: 68 DN-IHP--LVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N P L K H+ + +H +L ++D ++E NM ++R +K
Sbjct: 60 PNTTFPKMLEKYQQHSGKKLWDAKHENLSAEIDRIKRENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+ +
Sbjct: 113 LSSLNPRELIPIEEALQN 130
>gi|161158766|emb|CAM59041.1| MIKC-type MADS-box transcription factor WM2 [Triticum aestivum]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I F G +L+
Sbjct: 39 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSGRGRLYEY 93
Query: 67 -NDNIHPLVKAY--------SHARINELNQQH 89
N+++ ++ Y S + E+N QH
Sbjct: 94 SNNSVKATIERYKKATSDTSSAGTVAEINAQH 125
>gi|359719407|gb|AEV53931.1| MADS-box transcription factor [Triticum aestivum]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I F G +L+
Sbjct: 39 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSGRGRLYEY 93
Query: 67 -NDNIHPLVKAY--------SHARINELNQQH 89
N+++ ++ Y S + E+N QH
Sbjct: 94 SNNSVKATIERYKKATSDTSSAGTVAEINAQH 125
>gi|220962002|gb|ACL93422.1| MAF2 [Arabidopsis thaliana]
Length = 182
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNPSVDTLISLE 121
>gi|449465182|ref|XP_004150307.1| PREDICTED: MADS-box protein SOC1-like [Cucumis sativus]
gi|449524583|ref|XP_004169301.1| PREDICTED: MADS-box protein SOC1-like [Cucumis sativus]
Length = 197
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+EMK+IEN R +TFSKR +G+ KKA +E LC + I F +L+
Sbjct: 3 RGKVEMKRIENATSRQVTFSKRRNGVLKKA---YELSVLCDAEIAVII--FSQKGRLYEF 57
Query: 69 NIHPLVKAYSHARINELNQQHND------LLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ K R + ++ND LL+QL E E N KQM ++ + +
Sbjct: 58 ASSEMPKIMDRYRKCTKDAKNNDTKFDRQLLQQLRLEVESIN--KQMELMRLSHRKLLGY 115
Query: 123 PVDELNLQELLQMDS 137
+D +L EL +D+
Sbjct: 116 GLDNCSLDELEVLDA 130
>gi|297795989|ref|XP_002865879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311714|gb|EFH42138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 199
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V AI F +LH
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELS---VLCDAQVAAIV--FSQSGRLHEY 57
Query: 67 -NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN-MLKQMRRVKETQPRWWETPV 124
+ + +++ Y + + R L E K + N M+K++ ++ + +
Sbjct: 58 SSSEMEKIIERYDKFTNALYVAERPQIERYLQELKMEMNRMVKKIDLLEVHHRKLLGQGL 117
Query: 125 DELNLQELLQMDSAVD 140
D ++ EL ++D+ ++
Sbjct: 118 DSCSVTELQEIDTQIE 133
>gi|161158802|emb|CAM59059.1| MIKC-type MADS-box transcription factor WM15 [Triticum aestivum]
Length = 209
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN+ +R +TFSKR +GI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENQSNRQVTFSKRKNGILKKAKEISV---LCDAEVGVVV--FSSAGKLY-D 56
Query: 69 NIHP-------LVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
P L K +++ +++H L ++D +KE NM ++R +K
Sbjct: 57 FCSPKTSLSRILEKCQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 ---LNSLQPKELIMIEEALDN 130
>gi|42573656|ref|NP_974924.1| protein agamous-like 71 [Arabidopsis thaliana]
gi|332008756|gb|AED96139.1| protein agamous-like 71 [Arabidopsis thaliana]
Length = 172
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V AI
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSV---LCDAQVAAIV 47
>gi|189214345|gb|ACD85107.1| B-class MADS-box protein PI-1 [Ludisia discolor]
Length = 209
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEIS---VLCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKILEKYQQNSGKKLWDATHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|168027203|ref|XP_001766120.1| type I-M alpha MADS-domain protein PPTIM2 [Physcomitrella patens
subsp. patens]
gi|162682763|gb|EDQ69179.1| type I-M alpha MADS-domain protein PPTIM2 [Physcomitrella patens
subsp. patens]
Length = 182
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R KIE+KKIEN R + FSKR G+ KKASE+ +A PS+
Sbjct: 3 RAKIEIKKIENPSARQVCFSKRRGGLIKKASELSILCGSEVGVIVFSQAGKAFSFGHPSI 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ ++ L +D+ + S Q E ++++R
Sbjct: 63 DYVIDKTLSGESSDSDSGSAVTDVASQKVQQVQALQQQQKQVTQLLASE-----RELQRR 117
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAK 149
+ P WW+ PV QEL + +D L++ L++
Sbjct: 118 LLSYPFWWQKPVTNYRPQELHYLLQRLDGLYEMLLSR 154
>gi|212656633|gb|ACJ36228.1| PISTILLATA [Medicago truncatula]
gi|388510422|gb|AFK43277.1| unknown [Medicago truncatula]
Length = 181
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---LFGASGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M +R +K
Sbjct: 57 YISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIDLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ ++++
Sbjct: 110 GEDITSLNYKELMALEESLEN 130
>gi|29470181|gb|AAO74631.1| MADS-box protein AGL88 [Arabidopsis thaliana]
Length = 129
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 47 LCQPSVKAIANRFLGMSQ---LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQ 103
PS+K +A+R S+ L DN PLV+AY R ++L ++ L +L + E+
Sbjct: 26 FAHPSMKEVADRLKNPSRQEPLEKDNTRPLVEAYKKQRFHDLIKKMEALEEELAMDLEKL 85
Query: 104 NMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
+LK+ R K+ WW P + L+++EL + A+ +L
Sbjct: 86 KLLKESRNEKKLDKMWWNFPSEGLSVKELQERHQAMLEL 124
>gi|388522297|gb|AFK49210.1| unknown [Medicago truncatula]
Length = 165
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISV---LCDAQVSLI---LFGASGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M +R +K
Sbjct: 57 YISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIDLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ ++++
Sbjct: 110 GEDITSLNYKELMALEESLEN 130
>gi|189214307|gb|ACD85088.1| B-class MADS-box protein PI-2 [Anoectochilus formosanus]
Length = 210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ ++ A+ Q LA + +K
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLASVRDK 138
>gi|115462579|ref|NP_001054889.1| Os05g0203800 [Oryza sativa Japonica Group]
gi|50878339|gb|AAT85114.1| putative MADS box transcription factor [Oryza sativa Japonica
Group]
gi|113578440|dbj|BAF16803.1| Os05g0203800 [Oryza sativa Japonica Group]
gi|215767157|dbj|BAG99385.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG- 61
+K R KIE+K+IEN +R +TF KR SG+ KKA +E LC V + G
Sbjct: 39 AEKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALVVFSSRGR 95
Query: 62 MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+ + N+++ ++ Y A + E+N QH ++E + +Q+ ++
Sbjct: 96 LYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHY--------QQEAAKLKQQITNLQ 147
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ + +N +EL Q++ +D A+ NE A
Sbjct: 148 NSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCA 190
>gi|215260630|gb|ACJ64682.1| MADS-box protein MADS5 [Musa acuminata AAA Group]
Length = 235
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENYTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI ++ Y S I ++N QH ++E + Q++ ++
Sbjct: 60 NNIKSTIERYKKACADSSSSGAIVDVNSQHY-------YQQESAKLRHQIQILQNANRHL 112
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN++EL Q+++ ++
Sbjct: 113 MGDALSSLNVKELKQLENRLE 133
>gi|282721243|gb|ADA83714.1| flowering locus C1 variant 1, partial [Brassica rapa var.
purpuraria]
Length = 171
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R + FSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLS---VLCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|46367707|dbj|BAD15367.1| APETALA3-like MADS box protein [Triticum aestivum]
Length = 227
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L LK + R T+ R E
Sbjct: 58 CSTGTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSH-------LKDINRNLRTEIRMGE- 109
Query: 123 PVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 110 DLDALEFEELRDLEQNVD 127
>gi|189214331|gb|ACD85100.1| B-class MADS-box protein PI [Galeola falconeri]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAREISV---LCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLPKMLERYQQNSGKKLWDSKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|336093333|gb|AEI01160.1| SHATTERPPOOF-like protein [Prunus triloba]
Length = 244
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACTDSTNGGSVSEANTQFYQQESSKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL ++ ++ +K NE
Sbjct: 135 NIKELKNLEGRLEKGISRIRSKKNE 159
>gi|327391917|dbj|BAK09621.1| MADS-box transcription factor [Cyclamen persicum]
Length = 222
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMS-QLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + N
Sbjct: 3 RGKIEIKRIENNTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRCYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+ + ++ Y + N + ++E + + +Q++ ++ T + L
Sbjct: 60 NTVKSTIERYKKTSTDSANVCPTPEINAQFYQQESKKLRQQIQMLENTNRNLLGEGLGSL 119
Query: 128 NLQELLQMDSAVD 140
NL+E+ Q+++ +D
Sbjct: 120 NLKEMKQLETRLD 132
>gi|297795987|ref|XP_002865878.1| MADS-box protein [Arabidopsis lyrata subsp. lyrata]
gi|297311713|gb|EFH42137.1| MADS-box protein [Arabidopsis lyrata subsp. lyrata]
Length = 198
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V A+ G + + +
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELS---VLCDAQVAAMIFSQKGRLYEFAS 59
Query: 68 DNIHPLVKAYS 78
+I ++K Y+
Sbjct: 60 SDIRNMIKRYA 70
>gi|42568474|ref|NP_200000.3| protein agamous-like 71 [Arabidopsis thaliana]
gi|8809681|dbj|BAA97222.1| MADS box transcription factor-like [Arabidopsis thaliana]
gi|32402404|gb|AAN52784.1| MADS-box protein AGL71 [Arabidopsis thaliana]
gi|332008755|gb|AED96138.1| protein agamous-like 71 [Arabidopsis thaliana]
Length = 207
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V AI
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSV---LCDAQVAAIV 47
>gi|110559304|gb|ABG75908.1| SHATTERPROOF-like [Prunus persica]
gi|156081602|gb|ABU48614.1| SHATTERPROOF-like protein [Prunus persica]
gi|219664385|gb|ACL31234.1| PLENA-like MADS-box protein [Prunus persica]
Length = 244
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACTDSTNGGSVSEANTQFYQQESSKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL ++ ++ +K NE
Sbjct: 135 NIKELKNLEGRLEKGISRIRSKKNE 159
>gi|40644780|emb|CAE53898.1| putative MADS-box transcription factor [Triticum aestivum]
Length = 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L LK + R T+ R E
Sbjct: 58 CSTGTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSH-------LKDINRNLRTEIRMGE- 109
Query: 123 PVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 110 DLDALEFEELRDLEQNVD 127
>gi|390979684|gb|AFM30905.1| transcription factor MADS5 [Prunus avium]
Length = 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACTDSTNGGSVSEANTQFYQQESSKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL ++ ++ +K NE
Sbjct: 135 NIKELKNLEGRLEKGISRIRSKKNE 159
>gi|189214347|gb|ACD85108.1| B-class MADS-box protein PI-2 [Ludisia discolor]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ ++ A+ Q LA + +K
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLASVRDK 138
>gi|295854727|gb|ADG45820.1| mutant SHATTERPROOF-like protein [Prunus serrulata var. lannesiana]
Length = 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACTDSTNGGSVSEANTQFYQQESSKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL ++ ++ +K NE
Sbjct: 135 NIKELKNLEGRLEKGISRIRSKKNE 159
>gi|295854725|gb|ADG45819.1| SHATTERPROOF-like protein [Prunus serrulata var. lannesiana]
Length = 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACTDSTNGGSVSEANTQFYQQESSKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL ++ ++ +K NE
Sbjct: 135 NIKELKNLEGRLEKGISRIRSKKNE 159
>gi|297811115|ref|XP_002873441.1| MADS-box flowering locus C [Arabidopsis lyrata subsp. lyrata]
gi|297319278|gb|EFH49700.1| MADS-box flowering locus C [Arabidopsis lyrata subsp. lyrata]
Length = 196
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
++ + LLQ++
Sbjct: 112 VSAETLLQLE 121
>gi|226897251|dbj|BAH56657.1| agamous-like protein [Eucalyptus grandis]
Length = 251
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
K+ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G +
Sbjct: 14 KRIGGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRL 70
Query: 63 SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ N+++ ++ Y A + + Q + ++E + +Q+R ++ +
Sbjct: 71 YEYANNSVRGTIERYKKASSDSSHPQSVSEVNTQFYQQEASKLRRQIREIQVSNRHILGE 130
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ +L+ ++L ++S ++ +K NE
Sbjct: 131 GISDLSFKDLKNLESKLEKSISRVRSKKNE 160
>gi|284178640|gb|ADB81902.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 418
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +TFSKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTFSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+I ++ +++ ++E N+ D+L + + K +R+V+
Sbjct: 60 CSIEEVIARFANLPLHERNKSFEDMLARFSNNHMHLDRSKYVRKVE 105
>gi|91207156|sp|Q2V0P1.1|MAD58_ORYSJ RecName: Full=MADS-box transcription factor 58; AltName:
Full=OsMADS58
gi|83582645|dbj|BAE54300.1| transcription factor OsMADS58 [Oryza sativa Japonica Group]
gi|262093765|gb|ACY26072.1| MADS-box transcription factor 58 [Oryza sativa]
Length = 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG- 61
+K R KIE+K+IEN +R +TF KR SG+ KKA +E LC V + G
Sbjct: 39 AEKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALVVFSSRGR 95
Query: 62 MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+ + N+++ ++ Y A + E+N QH ++E + +Q+ ++
Sbjct: 96 LYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHY--------QQEAAKLKQQITNLQ 147
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ + +N +EL Q++ +D A+ NE A
Sbjct: 148 NSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCA 190
>gi|338930759|emb|CBX45125.1| GSOC1 protein [Gerbera hybrid cultivar]
Length = 211
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+EMK+I N R +TFSKR +G+ KKA E+ LC V I G + + +
Sbjct: 3 RGKVEMKRIVNATSRQVTFSKRRNGLLKKACELS---VLCDAEVALIILSQKGDVYEFSS 59
Query: 68 DNIHPLVKAY-SHARINELNQQHNDLLRQLDEEKEQQNML-----------KQMRRVKET 115
NI ++ Y HA+ NE + E E QN L K++ +++ +
Sbjct: 60 SNIKKTIQKYRDHAKANE----------SCNTEIEPQNQLQNLKHDTAAIQKKIEQLEVS 109
Query: 116 QPRWWETPVDELNLQELLQMDSAVD 140
+ + + +L ELL++DS ++
Sbjct: 110 ERKLLGQNLGSCSLDELLKLDSKLE 134
>gi|282721249|gb|ADA83717.1| flowering locus C1 variant 1 [Brassica rapa var. purpuraria]
Length = 192
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R + FSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVPFSKRRNGLIEKARQLS---VLCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + + ++ + + E+ VD
Sbjct: 60 GDNLVKILDRY--------GKQHDDDLKALDRQSKALDCGSHHELLELVESKLEESNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|220961971|gb|ACL93398.1| MAF2 [Arabidopsis thaliana]
Length = 182
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQVS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D + L+ ++
Sbjct: 110 DNASEDTLISLE 121
>gi|95981884|gb|ABF57927.1| MADS-box transcription factor TaAGL26 [Triticum aestivum]
Length = 209
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN+ +R +TFSKR +GI KKA EI LC V + F +L++
Sbjct: 3 RGKIEIKRIENQSNRQVTFSKRKNGILKKAKEISV---LCDAEVGVVV--FSSAGKLYDF 57
Query: 68 ----DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
++ +++ Y L +++H L ++D +KE NM ++R +K
Sbjct: 58 CSPRTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 --MNSLQPKELIMIEEALDN 130
>gi|187369552|dbj|BAG31395.1| PLENA-like MADS-box protein [Torenia fournieri]
Length = 242
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 16 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRLYEYAN 72
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E +Q+R ++++ + V +
Sbjct: 73 NSVRATIDRYKQATSDTPNSMSTSEANTQFYQQEAAKFRRQIREIQKSNRQILGEGVTGM 132
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
+L+EL ++ V+ +K NE
Sbjct: 133 HLKELKNTETKVEKAISRIRSKKNE 157
>gi|45356043|dbj|BAD12462.1| PISTILLATA-like MADS box protein [Triticum aestivum]
Length = 209
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN+ +R +TFSKR +GI KKA EI LC V + F +L++
Sbjct: 3 RGKIEIKRIENQSNRQVTFSKRKNGILKKAKEISV---LCDAEVGVVV--FSSAGKLYDF 57
Query: 68 ----DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
++ +++ Y L +++H L ++D +KE NM ++R +K
Sbjct: 58 CSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 --LNSLQPKELIMIEEALDN 130
>gi|237701193|gb|ACR16057.1| GLOBOSA-like MADS-box transcription factor [Vanilla planifolia]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAREISV---LCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLPKMLERYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|242090155|ref|XP_002440910.1| hypothetical protein SORBIDRAFT_09g016220 [Sorghum bicolor]
gi|241946195|gb|EES19340.1| hypothetical protein SORBIDRAFT_09g016220 [Sorghum bicolor]
Length = 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
AGK ++ R++ E+ IE+ RL+TFSKR SG+ KKASE+ LC V A+ G
Sbjct: 7 AGKASQGRRRRELVLIEDPKSRLVTFSKRKSGLLKKASEL---SLLCGARVAAVVFSATG 63
Query: 62 M-SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
S + ++ ++ +R L D+++E++ M RR KET R
Sbjct: 64 KPSAVGAPSVERVI-----SRFTPLPSGEG------DDDREREVMEVTARRAKETGARVA 112
Query: 121 E 121
E
Sbjct: 113 E 113
>gi|217071512|gb|ACJ84116.1| unknown [Medicago truncatula]
Length = 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAREISV---LCDAQVSLI---LFGASGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P ++ Y A L + +H +L ++D +KE +M +R +K
Sbjct: 57 YISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIDLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ ++++
Sbjct: 110 GEDITSLNYKELMALEESLEN 130
>gi|5805228|gb|AAD51896.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIT--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|226482388|emb|CAX73793.1| related to vertebrate MEF2 transcription factor [Schistosoma
japonicum]
Length = 418
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+KIE+K I++E +RL+TF+KR SG++KKA +E LC+ + + +NR +
Sbjct: 3 RKKIEIKFIKDEKNRLVTFAKRKSGLFKKA---YELSVLCECEIALLVFTRSNRLYQYAS 59
Query: 65 LHNDNIHPLVKAYSHARINEL 85
+ D H L + H R NE
Sbjct: 60 VTVD--HALQRLKKHHRANEF 78
>gi|45385970|gb|AAS59830.1| MADS-box protein RMADS219 [Oryza sativa]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 27/144 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + F +L+ D
Sbjct: 4 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISV---LCDAEVGVVI--FSSAGKLY-D 57
Query: 69 NIHPLVKAYSHARINE----------LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQP 117
P S +RI E +++H L ++D +KE NM ++R +K
Sbjct: 58 YCSP---KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED- 113
Query: 118 RWWETPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 114 ------LNSLQPKELIMIEEALDN 131
>gi|359480133|ref|XP_003632406.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
vinifera]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 26/134 (19%)
Query: 25 ITFSKRGSGIYKKASEIW----------------EAIHLCQPSVKAIANRFLGMSQLHND 68
+TFSKR +G++KKA E+ A PS A+ +RFL + ++
Sbjct: 19 VTFSKRRTGLFKKAGELCVLCGAEAAVIVFSPGRRAFVFGHPSADAVIDRFL-HRETNSR 77
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
+ P + + H + +Q+ + L +L+ ++EQ+ + WW+ P++ +
Sbjct: 78 ALVPAGQVHGH-----VQRQYLEALGRLEVKREQEETVGG----DGEGGFWWDAPIENMG 128
Query: 129 LQELLQMDSAVDDL 142
L EL Q ++++L
Sbjct: 129 LNELEQFRGSLEEL 142
>gi|4218173|emb|CAA08804.1| MADS-box protein, GGLO1 [Gerbera hybrid cultivar]
Length = 197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC +V + G +
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRKNGIIKKAKEI---TVLCDANVSLVIYGSSGKMYEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N+ ++ Y N+L + +H +L ++D +KE ++M ++R +K
Sbjct: 60 PKTNLIDMLDRYQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ LN +EL+ A +D + L I EK
Sbjct: 113 ITSLNYEELI----AYEDALENGLTNIREK 138
>gi|115441465|ref|NP_001045012.1| Os01g0883100 [Oryza sativa Japonica Group]
gi|73920926|sp|Q40702.1|MADS2_ORYSJ RecName: Full=MADS-box transcription factor 2; AltName:
Full=NMADS1; AltName: Full=OsMADS2; AltName:
Full=RMADS219
gi|886401|gb|AAB52709.1| MADS box protein [Oryza sativa]
gi|13272279|gb|AAK17066.1| MADS [Oryza sativa]
gi|20161446|dbj|BAB90370.1| MADS box protein [Oryza sativa Japonica Group]
gi|113534543|dbj|BAF06926.1| Os01g0883100 [Oryza sativa Japonica Group]
gi|125528615|gb|EAY76729.1| hypothetical protein OsI_04684 [Oryza sativa Indica Group]
gi|215678541|dbj|BAG92196.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619633|gb|EEE55765.1| hypothetical protein OsJ_04312 [Oryza sativa Japonica Group]
Length = 209
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 27/144 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISV---LCDAEVGVVI--FSSAGKLY-D 56
Query: 69 NIHPLVKAYSHARINE----------LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQP 117
P S +RI E +++H L ++D +KE NM ++R +K
Sbjct: 57 YCSP---KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED- 112
Query: 118 RWWETPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 ------LNSLQPKELIMIEEALDN 130
>gi|334188328|ref|NP_001190517.1| protein agamous-like 71 [Arabidopsis thaliana]
gi|332008757|gb|AED96140.1| protein agamous-like 71 [Arabidopsis thaliana]
Length = 219
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V AI F +LH
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSV---LCDAQVAAIV--FSQSGRLH 55
>gi|312281995|dbj|BAJ33863.1| unnamed protein product [Thellungiella halophila]
Length = 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+I+N+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+N
Sbjct: 3 RRKVEIKRIDNKSSRQVTFSKRRNGLVEKARQLS---ILCESSIAVLVVSASG--KLYNS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
D++ ++ Y + QH D L+ L+ ++ +N L ++ Q E V
Sbjct: 58 SSGDSMTKIIDRY--------DIQHADDLKTLELAEKTRNYLPHKELLELVQSNLEEPNV 109
Query: 125 DELNLQELLQMD 136
D +++ L+ ++
Sbjct: 110 DNVSVDSLISVE 121
>gi|157674587|gb|ABV60385.1| floral organ identity protein [Carica papaya]
Length = 219
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI + Y A + E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NNIRSTIDRYKKACSDSSATTSVTEINAQYY--------QQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L+++EL Q+++ ++
Sbjct: 112 MGDSLSALSVKELKQLENRLE 132
>gi|94983067|gb|ABF50238.1| GLOBOSA/PISTILLATA, partial [Nicotiana langsdorffii x Nicotiana
sanderae]
Length = 199
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G M + +
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVIIFASSGKMHEFSS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y L + +H +L +++E +K+ NM ++R +K +
Sbjct: 60 TSLVDILDQYHKLTGRRLWDAKHENLDNEINEVKKDNDNMQIELRHLK-------GEDIT 112
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
LN ++L+ ++ A+D+ + K NE
Sbjct: 113 SLNHRDLMMLEDALDNGLTSIRNKQNE 139
>gi|125551506|gb|EAY97215.1| hypothetical protein OsI_19135 [Oryza sativa Indica Group]
Length = 194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW-------------EAIHL-- 47
G+ + RQ+IE+++I+N++ R +TF+KR G++KKASE+ A H+
Sbjct: 6 GRTSMGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYA 65
Query: 48 -CQPSVKAIANRFLGMSQLHNDNIHPL----VKAYSHARINELNQQHNDLLRQLDEEKEQ 102
PSV A+ + + + + P+ + L +D Q+ E +
Sbjct: 66 FGHPSVDAVLRSYASVPR-EAAAVAPVPVHGGGGGEDVDLLGLRLAADDTGAQVAAEHAR 124
Query: 103 -QNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
+++ ++ + K + WWE VD L EL + +A+ L
Sbjct: 125 MRDVAARIVQAKAGRRFWWEADVDALGEAELPEFITALKKL 165
>gi|46369967|gb|AAS89819.1| globosa [Triticum aestivum]
Length = 209
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN+ +R +TFSKR +GI KKA EI LC V + F +L++
Sbjct: 3 RGKIEIKRIENQSNRQVTFSKRKNGILKKAKEISV---LCDAEVGVVV--FSSAGKLYDF 57
Query: 68 ----DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
++ +++ Y L +++H L ++D +KE NM ++R +K
Sbjct: 58 CSPRTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 --MNSLQPKELIMIEEALDN 130
>gi|729976|sp|Q07474.1|MADS2_PETHY RecName: Full=Floral homeotic protein PMADS 2
gi|22667|emb|CAA49568.1| PMADS2 [Petunia x hybrida]
Length = 212
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITV---LCDAKVSLII--FGNSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ + ++ Y L + +H +L ++D +KE NM ++R +K
Sbjct: 58 CSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ LN +EL+ ++ + + + AK +E
Sbjct: 113 --INSLNHKELMVLEEGLTNGLSSISAKQSE 141
>gi|443731072|gb|ELU16310.1| hypothetical protein CAPTEDRAFT_221100 [Capitella teleta]
Length = 437
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 70 GKKTKGRVKIKMEFIENKLRRYTTFSKRKTGIMKKAYEL 108
>gi|410610203|gb|AFV74870.1| TM6-like protein [Balanophora laxiflora]
Length = 220
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+K+IEN +R +T+SKR +GI+KKA+E+ LC + I S +N+
Sbjct: 3 RGKVEIKRIENSTNRQVTYSKRKNGIFKKAAEL---TVLCDARISLI---MFSKSGKYNE 56
Query: 69 NIHP------LVKAYSHARINELNQQHNDLLR-QLDEEKEQQNMLKQMRRVKETQPRWWE 121
+ P + Y A +L H + ++ +L++ K+ L+ +E + R E
Sbjct: 57 YMSPTTTTKKIYDQYQKALDVDLWGSHYEKMQAELNKLKDINGKLR-----REIRQRIGE 111
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN++EL+ ++ +DD
Sbjct: 112 -ELEGLNIRELIDLEKKIDD 130
>gi|255629526|gb|ACU15109.1| unknown [Glycine max]
Length = 190
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+NI ++ Y A
Sbjct: 60 NNIRSTIERYKKA 72
>gi|66735452|gb|AAY53908.1| MADS-box protein MADS1 [Musa acuminata]
Length = 235
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI ++ Y A I ++N QH ++E + Q++ ++
Sbjct: 60 NNIKSTIERYKKACADSSSSDAIVDVNSQHY-------YQQESAKLRHQIQVLQNANRHL 112
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN++EL Q+++ ++
Sbjct: 113 MGDALSSLNVKELKQLENRLE 133
>gi|358357314|gb|AEU08497.1| MADS1 [Corylus heterophylla]
Length = 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIVFSSRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N ++E + Q+R V+++ + EL
Sbjct: 75 NSVKTTIERYKKACADSSNSGSVSEANTQFYQQEAAKLRGQIRSVQDSNRHMLGEALSEL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N +EL ++ ++ +K NE
Sbjct: 135 NFKELKSLEKNLEKGINRIRSKKNE 159
>gi|356549517|ref|XP_003543140.1| PREDICTED: MADS-box protein JOINTLESS-like [Glycine max]
Length = 206
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 35/190 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N + R +TFSKR G++KKA E+ LC + I
Sbjct: 3 RKKIPIKKIDNINARQVTFSKRRKGLFKKAQELS---TLCDAEIALIVFSTTSKLFEYAS 59
Query: 57 ----------NRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
+R G+ L N +I + + S + + + + + QL+ E+ Q +
Sbjct: 60 SSMQQILERRDRHSGIQGLVNPSIGQQLGSDSLGILRKEIEHKTNEMSQLNGEEIQGLTI 119
Query: 107 KQMRRVKETQPRWWETPV---DELNLQELLQMDSAV-------DDLHQTFLAKINEKTAA 156
K++++V+E R W T DE +QE+ + + L Q+F+ + + +
Sbjct: 120 KELQKVEELLQRRWTTISKIKDEKIIQEINHLKTKEAKLMEENQKLKQSFVREQRQPYES 179
Query: 157 AAASSSVAPP 166
SSS PP
Sbjct: 180 FTCSSSEFPP 189
>gi|27657749|gb|AAO18230.1| MADS-box transcriptional factor HAM31 [Helianthus annuus]
Length = 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+++I+N RL+T+SKR +GI +KA EI LC +V + G +
Sbjct: 3 RGKIEIQRIDNTIHRLVTYSKRKNGIIRKAKEITV---LCDANVSLVVYGSSGKMYEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N N+ ++ Y N+L + +H +L ++D +KE ++M ++R +K
Sbjct: 60 PNTNLTDMLDRYPRLSGNKLWDAKHENLQIEIDRIKKENESMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
+ LN +EL+ + A+++
Sbjct: 113 ITSLNYEELIAFEDALEN 130
>gi|226467780|emb|CAX69766.1| related to vertebrate MEF2 transcription factor [Schistosoma
japonicum]
Length = 781
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+KIE+K I++E +RL+TF+KR SG++KKA +E LC+ + + +NR +
Sbjct: 3 RKKIEIKFIKDEKNRLVTFAKRKSGLFKKA---YELSVLCECEIALLVFTRSNRLYQYAS 59
Query: 65 LHNDNIHPLVKAYSHARINEL 85
+ D H L + H R NE
Sbjct: 60 VTVD--HALQRLKKHHRANEF 78
>gi|4105097|gb|AAD02250.1| MADS box protein 26 [Cucumis sativus]
Length = 211
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + G +
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEI---TVLCDAQVSLVIFASSGKMHEYCS 59
Query: 69 NIHPLV----KAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
PLV K + + + +H +L ++D +KE NM ++R ++
Sbjct: 60 PSTPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
+ LN +EL+ ++ A+++
Sbjct: 113 ITSLNYKELMALEEALEN 130
>gi|413924993|gb|AFW64925.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC ++ I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRWMGLFKKANEV--AI-LCDAQIRVII--FSGSGRMY 55
>gi|187369550|dbj|BAG31394.1| PLENA-like MADS-box protein [Torenia fournieri]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 16 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRLYEYAN 72
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E +Q+R ++++ + V +
Sbjct: 73 NSVRATIDRYKQATSDTPNSMSTSEANTQFYQQEAAKFRRQIREIQKSNRQILGEGVTGM 132
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
+L+EL ++ V+ +K NE
Sbjct: 133 HLKELKNTETKVEKAISRIRSKKNE 157
>gi|8163950|gb|AAF73933.1|AF230704_1 MADS box transcription factor TM6 [Petunia x hybrida]
gi|42795380|gb|AAS46017.1| MADS-box protein TM6 [Petunia x hybrida]
Length = 225
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R KIE+KKIEN +R +T+SKR +G++KKA E+ LC + I + R
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRNGLFKKAKELTV---LCDAKICLIMLSSTRKFHEYTS 59
Query: 66 HNDNIHPLVKAYSHA-RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N ++ Y ++ N+ + + L+ K+ N L+ +E + R E +
Sbjct: 60 PNTTTKKMIDLYQRTLGVDIWNKHYEKMQENLNRLKDINNKLR-----REIRQRTGE-DM 113
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINEK 153
LNLQEL + V D LA+I E+
Sbjct: 114 SGLNLQELCHLQGNVSD----SLAEIRER 138
>gi|161158820|emb|CAM59068.1| MIKC-type MADS-box transcription factor WM22B [Triticum aestivum]
Length = 228
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 23/158 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKTDQPALDLNLEHSKYANLNDQLAEASLRLRQMR-----GEE 114
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQT----FLAKINE 152
VDEL L E +++ + + QT FL +INE
Sbjct: 115 LEGLSVDELQLLE-KNLETGLHRVLQTKDQQFLEQINE 151
>gi|66270039|gb|AAY43351.1| flowering locus C [Arabidopsis thaliana]
gi|66270041|gb|AAY43352.1| flowering locus C [Arabidopsis thaliana]
gi|66270045|gb|AAY43354.1| flowering locus C [Arabidopsis thaliana]
Length = 121
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|359806378|ref|NP_001240979.1| uncharacterized protein LOC100805260 [Glycine max]
gi|255647867|gb|ACU24392.1| unknown [Glycine max]
Length = 224
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 22/142 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IENE R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENETSRQVTFSKRRNGLLKKA---FELSVLCDAEVALIIFSTRGRLYEFSS 59
Query: 68 DNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+I+ V+ Y S+ I+E N QH L+++D +M K++ +++++ +
Sbjct: 60 SSINKTVERYQRKIEDLGVSNKGIHE-NTQH---LKEVD-----MSMAKKIEHLEDSRRK 110
Query: 119 WWETPVDELNLQELLQMDSAVD 140
+D+ ++ EL Q+++ ++
Sbjct: 111 LLGDELDKCSIDELQQLENQLE 132
>gi|395440108|gb|AFN61593.1| MADS box transcription factor GLO [Paphiopedilum concolor]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFS+R +GI KKA EI LC V + LG MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSRRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHMKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|356563236|ref|XP_003549870.1| PREDICTED: agamous-like MADS-box protein AGL19-like [Glycine max]
Length = 220
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IENE R +TFSKR +G+ KKA +E LC+ V I G + + +
Sbjct: 3 RGKTQMKRIENETSRQVTFSKRRNGLLKKA---FELSVLCEAEVALIIFSTRGRLYEFSS 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKE-QQNMLKQMRRVKETQPRWWETPVDE 126
+++ V+ Y +I +L + + ++ KE +M K++ +++++ + +D+
Sbjct: 60 SSVNKTVERYQR-KIKDLGVSNKGIQKKTRHLKEGDMSMAKKIEHLEDSRRKLLGDELDK 118
Query: 127 LNLQELLQMDSAVD 140
++ EL Q+++ ++
Sbjct: 119 CSIDELQQLENQLE 132
>gi|5019429|emb|CAB44448.1| putative MADS domain transcription factor GGM2 [Gnetum gnemon]
gi|23095852|emb|CAD18858.1| putative MADS-domain transcription factor [Gnetum gnemon]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIEMKKIEN ++R +TFSKR +G+ KKA E+ A+ LC V I G + Q N
Sbjct: 3 RGKIEMKKIENTNNRQVTFSKRRNGLMKKAQEL--AV-LCDAEVGLIIFSSTGKLFQYCN 59
Query: 68 DNIHPLVKAY 77
++ +++ Y
Sbjct: 60 TSMSQVLEKY 69
>gi|60100344|gb|AAX13299.1| MADS box protein PIa [Lotus japonicus]
gi|388495212|gb|AFK35672.1| unknown [Lotus japonicus]
Length = 208
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H D
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGILKKAKEI---TVLCDAQVSLII--FAASGKMH-D 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P +++ Y L + +H +L +++ +KE M ++R +K
Sbjct: 57 YISPSTTLVDMLERYHKTSGKRLWDAKHENLNGEIERLKKENDGMQIELRHLKGDD---- 112
Query: 121 ETPVDELNLQELLQMDSAVDD 141
++ LN +EL+ +++ +++
Sbjct: 113 ---INSLNYKELMALEAGLEN 130
>gi|81238286|gb|ABB59993.1| MADS-box protein [Taihangia rupestris]
Length = 209
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+K+IEN +R +T++KR +GI KKA EI LC V I + + +
Sbjct: 3 RGKIEIKRIENSSNRQVTYTKRRNGIIKKAKEITV---LCDAKVFVIIVPSSGKMVDFRS 59
Query: 65 LHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWET 122
+ + L+ Y N+L +Q+H +L ++D+ KE M ++R +K +
Sbjct: 60 GPKETLLKLLDKYHAQGGNKLWDQKHENLFIEIDKVRKENDGMQIELRHMKGEDISSL-S 118
Query: 123 PVDELNLQELLQMD-SAVDDLHQTFLAKINEKTAAA 157
+D ++L+E L++ S++ D L + + T A
Sbjct: 119 HLDLMSLEEALEIGLSSIRDKKAQHLDAVIDNTRAV 154
>gi|297820174|ref|XP_002877970.1| APETALA3 [Arabidopsis lyrata subsp. lyrata]
gi|297323808|gb|EFH54229.1| APETALA3 [Arabidopsis lyrata subsp. lyrata]
Length = 232
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTVSDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDD 141
+DEL++QEL +++ +D+
Sbjct: 113 LDELDIQELRRLEDEMDN 130
>gi|224145114|ref|XP_002325531.1| predicted protein [Populus trichocarpa]
gi|222862406|gb|EEE99912.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI + Y + + I E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NNIRSTIDRYKKASSDSSNASSITEINAQY--------YQQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
V L+++EL Q+++ ++
Sbjct: 112 MGDAVSNLSVKELKQLENRLE 132
>gi|356509497|ref|XP_003523484.1| PREDICTED: agamous-like MADS-box protein AGL11-like [Glycine max]
Length = 222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVSLIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+NI ++ Y A
Sbjct: 60 NNIRSTIERYKKA 72
>gi|405971987|gb|EKC36786.1| Serum response factor [Crassostrea gigas]
Length = 485
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 54 GKKTKGRVKIKMEFIENKLRRYTTFSKRKTGIMKKAYEL 92
>gi|62132633|gb|AAX69066.1| MADS box protein M3 [Pisum sativum]
Length = 243
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+ +++I+N+ +R +TFSKR SG+ KKA +E LC V I LG + Q +
Sbjct: 3 RGKVVLERIQNKINRQVTFSKRRSGLLKKA---FELSVLCDAEVALIIFSSLGKLFQYSS 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ--MRRVK-----ETQPRWW 120
+++ +++ Y N ++ ++ DL EE E Q + ++ M RVK +TQ +
Sbjct: 60 TDLNKIIEKYRQCCFNNMS-ENGDL-----EEHESQGLYEELLMLRVKHESLAQTQRNFL 113
Query: 121 ETPVDELNLQEL 132
++ L++++L
Sbjct: 114 GEELNTLSIKDL 125
>gi|333952835|gb|AEG25807.1| APETALA3-like protein [Aquilegia coerulea]
Length = 206
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR SG+ KKA E+ LC V I F G L
Sbjct: 3 RGKIEIKRIENTTNRQVTYSKRRSGLVKKAKEL---TVLCDAQVSLIM--FSGSGNLSEF 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM----RRVKETQPRWWETPV 124
H + N+ Q + EK Q+ M KQ+ R K+ R +
Sbjct: 58 TSHSTTTKQVY---NQYQQVTGIDIWNSHYEKMQEKMKKQLEINTRLRKQIGERIGVESL 114
Query: 125 DELNLQELLQMDSAVDD 141
D+++ EL ++ +D+
Sbjct: 115 DDMSFNELCSLEQDLDE 131
>gi|242097026|ref|XP_002439003.1| hypothetical protein SORBIDRAFT_10g029810 [Sorghum bicolor]
gi|241917226|gb|EER90370.1| hypothetical protein SORBIDRAFT_10g029810 [Sorghum bicolor]
Length = 226
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRTGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L N+Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSPGTDIKTIFDRYQQAIGTSLWNEQYENMQRTLSHLKDINRNLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L EL ++ VD
Sbjct: 112 DLDTLEFDELRGLEQNVD 129
>gi|407914519|gb|AFU51419.1| FLC [Arabidopsis thaliana]
Length = 162
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|224063010|ref|XP_002300964.1| MIKC mads-box transcription factor [Populus trichocarpa]
gi|222842690|gb|EEE80237.1| MIKC mads-box transcription factor [Populus trichocarpa]
Length = 211
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 23/152 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRSGIIKKAKEITV---LCDAQVSLVI--FASSGRMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ + L+ Y L + +H +L ++D +KE ++M ++R +K
Sbjct: 58 CSPSTTVVDLLDKYHKQSGKRLWDAKHENLSNEIDRIKKENESMQIELRHLK-------G 110
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ L +EL+ ++ A+D T LA + +K
Sbjct: 111 QDISSLPHKELMAIEEALD----TGLAAVRKK 138
>gi|145334363|ref|NP_001078563.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
gi|61661328|gb|AAX51270.1| flowering locus C protein [Arabidopsis thaliana]
gi|332004116|gb|AED91499.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
Length = 167
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|284178630|gb|ADB81897.1| MIKC* MADS-box transcription factor [Sphagnum subsecundum]
Length = 514
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENTTNRQVTYSKRRNGLMKKA---YELSVLCDIDVALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVIARFANLPLHERNKSFEDMLTRF 88
>gi|5805216|gb|AAD51890.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQSISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|326499353|dbj|BAK06167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ Y S A + E+N Q ++E M Q++ ++ T
Sbjct: 60 NSVKATIERYKKAHACGSTSGAPLIEVNAQQY-------YQQETAKMRHQIQMLQNTNKH 112
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
V L+L+EL Q++S ++ A+ NE
Sbjct: 113 LVGDSVGNLSLKELKQLESRLEKGIAKIRARKNE 146
>gi|296923607|dbj|BAJ08315.1| flowering locus C [Arabidopsis halleri subsp. gemmifera]
Length = 196
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVDTLVQLE 121
>gi|33338587|gb|AAQ13915.1|AF227195_1 MADS box transcription factor [Elaeis guineensis]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + G MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCDAQVSVVIFSSSGKMSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+ + +++ Y H +L + +H L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSRILERYQHNSGKKLWDAKHESLSAEIDRIKKENDNMQIELRHLK 109
>gi|5805224|gb|AAD51894.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|220961975|gb|ACL93401.1| MAF2 [Arabidopsis thaliana]
Length = 182
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D + L+ ++
Sbjct: 110 DNASEDTLISLE 121
>gi|78146139|gb|ABB22777.1| PISTILLATA-like MADS box protein [Crocus sativus]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQL--- 65
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + F +L
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESQVSVVI--FSNSGKLSDY 57
Query: 66 --HNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ +++ Y +L + +H +L Q+D +KE NM ++R +K
Sbjct: 58 CSSNTSLPKILERYQLNCGKKLWDAKHENLSAQIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 --LNSLNPKELIPIEEALTN 130
>gi|410945816|gb|AFV94645.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|410945822|gb|AFV94648.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
Length = 196
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVDTLVQLE 121
>gi|388495694|gb|AFK35913.1| unknown [Medicago truncatula]
Length = 224
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGSLKKA---FELSVLCDAEVALIVFSPRGRLYEFTS 59
Query: 68 DNIHPLVKAY-SHARINELNQQHNDL--LRQLDEEKEQQNMLKQM 109
+I ++ Y SH RIN + +QL EE E NM+K++
Sbjct: 60 SSILETIERYRSHTRINNTPTTSESVENTQQLKEEAE--NMMKKI 102
>gi|359483637|ref|XP_002271718.2| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKIE+KKIE + +TFSKR +G++KKA E+ A PS
Sbjct: 3 RQKIEIKKIEKKSSLEVTFSKRRTGLFKKAGELCVLCGAEAAVIVFSPGRRAFVFGHPSA 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
A+ +RFL + ++ + P + + H + +Q+ + L +L+ +KEQ+ +
Sbjct: 63 DAVIDRFL-HRETNSRALVPAGQVHGH-----VQRQYLEALGRLEVKKEQEETVGG---- 112
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDL 142
WW+ P++ + L EL Q ++++L
Sbjct: 113 DGEGGFWWDAPIENMGLNELEQFRGSLEEL 142
>gi|356527761|ref|XP_003532476.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Glycine max]
Length = 177
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 30/131 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------Q 49
R+KIE+ ++++ + + +TFSKR +G++KKA+E+ LC
Sbjct: 3 RRKIEITEVKDSNTKQVTFSKRRTGLFKKANELS---ILCGAEVAIVVFSPGNNPYSFGH 59
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYS--HARINELNQQHNDLLRQ-LDEEKEQQNML 106
PSV +A++FL ND V+ S A ++ LNQQ +D+ + L+E+K+ +
Sbjct: 60 PSVDVVADKFLKQEPKSND-----VQGTSIEVADMDRLNQQLSDVQNEILEEQKKAAELN 114
Query: 107 KQMRRVKETQP 117
+++++ TQP
Sbjct: 115 ERLKQKGVTQP 125
>gi|299893460|gb|ADJ57925.1| MADS affecting flowering 2 variant 3 [Arabidopsis thaliana]
Length = 253
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
M GKK +E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ +
Sbjct: 1 MGGKK------VEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VS 49
Query: 61 GMSQLH----NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQ 116
G +L+ DN+ ++ Y H D L LD ++ +N L ++ Q
Sbjct: 50 GSGKLYKSASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQ 101
Query: 117 PRWWETPVDELNLQELLQMD 136
+ E+ VD ++ L+ ++
Sbjct: 102 SKLEESDVDNASVDTLISLE 121
>gi|449451791|ref|XP_004143644.1| PREDICTED: MADS-box protein SOC1-like [Cucumis sativus]
Length = 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG- 61
GK R K+EMK+IEN R +TFSKR +G+ KKA +E LC V I G
Sbjct: 12 GKNDMVRGKVEMKRIENSTSRQVTFSKRRNGLLKKA---YELSVLCDAEVSVIIFSQKGR 68
Query: 62 MSQLHNDNIHPLVKAY-SHARINELNQ-QHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+ + + ++ ++ Y H + + N + ++QL +E E K++ +++++Q +
Sbjct: 69 LYEFSSSDMQKTIERYRKHGKDGQSNPFRSEGYMQQLKQEAEM--TAKKIEQLEKSQQKL 126
Query: 120 WETPVDELNLQELLQMD 136
+D + +E+ +++
Sbjct: 127 LGRGLDSCSFEEIREIE 143
>gi|5805232|gb|AAD51898.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|5805234|gb|AAD51899.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|78146158|gb|ABB22778.1| PISTILLATA-like MADS box protein [Crocus sativus]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQL--- 65
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + F +L
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESQVSVVI--FSNSGKLSDY 57
Query: 66 --HNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ +++ Y +L + +H +L Q+D +KE NM ++R +K
Sbjct: 58 CSSNTSLPKILERYQLNCGKKLWDAKHENLSAQIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 --LNSLNPKELIPIEEALTN 130
>gi|390337720|ref|XP_003724626.1| PREDICTED: uncharacterized protein LOC592160 isoform 1
[Strongylocentrotus purpuratus]
Length = 497
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 74 GKKTKGRVKIKMEFIENKLRRYTTFSKRKTGIMKKAYEL 112
>gi|189214337|gb|ACD85103.1| B-class MADS-box protein PI-2 [Habenaria petelotii]
Length = 211
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|3114747|emb|CAA65544.1| serum response factor [Geodia cydonium]
Length = 383
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 26/151 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR SG+ KKA E+ E H+
Sbjct: 56 GKKTRGRVKIQMEYIQNKLRRYTTFSKRKSGMMKKAYELSTLTGTQVMLLVASETGHVYT 115
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHA----RINELNQQHNDL-LRQLD 97
QP + + A + L + LH + P+ + R++ + DL L
Sbjct: 116 FATPKLQPMITSEAGKALIQTCLHQPDPAPMGQGPHQGDFDVRMSSTGYEETDLGYSGLT 175
Query: 98 EEKEQQN-MLKQMRRVKETQPRWWETPVDEL 127
EE +N M + QP W P
Sbjct: 176 EEDSFKNGMDMHISNAAAIQPSWTRAPSSPF 206
>gi|30523252|gb|AAP31677.1| flowering locus C [Brassica oleracea var. capitata]
gi|34591545|gb|AAQ76274.1| flowering locus C [Brassica oleracea var. capitata]
gi|34591606|gb|AAQ76276.1| flowering locus C [Brassica oleracea var. capitata]
gi|104162044|emb|CAJ77614.1| flowering protein [Brassica oleracea var. alboglabra]
Length = 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC S+ + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLVEKARQLS---VLCDASIALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + + ++ + E+ V
Sbjct: 60 GDNLVRILDRY--------GKQHADDLKALDLQSKALSYGSHNELLELVDSKLVESNVGG 111
Query: 127 LNLQELLQMDSAVDD 141
+++ L+Q++ +++
Sbjct: 112 VSVDTLVQLEGVLEN 126
>gi|390337722|ref|XP_796790.2| PREDICTED: uncharacterized protein LOC592160 isoform 2
[Strongylocentrotus purpuratus]
Length = 438
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 74 GKKTKGRVKIKMEFIENKLRRYTTFSKRKTGIMKKAYEL 112
>gi|15232493|ref|NP_191002.1| Floral homeotic protein APETALA 3 [Arabidopsis thaliana]
gi|543815|sp|P35632.1|AP3_ARATH RecName: Full=Floral homeotic protein APETALA 3
gi|166608|gb|AAA32740.1| APETELA3 [Arabidopsis thaliana]
gi|5805212|gb|AAD51888.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805214|gb|AAD51889.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805218|gb|AAD51891.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805222|gb|AAD51893.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805236|gb|AAD51900.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805242|gb|AAD51903.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|7288012|emb|CAB81799.1| floral homeotic protein APETALA3 (AP3) [Arabidopsis thaliana]
gi|17979335|gb|AAL49893.1| putative floral homeotic protein APETALA3 (AP3) [Arabidopsis
thaliana]
gi|23296740|gb|AAN13159.1| putative floral homeotic protein APETALA3 (AP3) [Arabidopsis
thaliana]
gi|332645695|gb|AEE79216.1| Floral homeotic protein APETALA 3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|399950163|gb|AFP65766.1| GLO-like protein 2 [Iris fulva]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQL--- 65
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + F +L
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREIS---VLCEAQVSVVI--FSSSGKLSDY 57
Query: 66 --HNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ +++ Y +L + +H +L Q+D +KE NM ++R +K
Sbjct: 58 CSSNTSLPKILERYQLNCGKKLWDAKHENLSAQIDRIKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 --LNSLNPKELIPIEEALQN 130
>gi|224076916|ref|XP_002305048.1| predicted protein [Populus trichocarpa]
gi|2981131|gb|AAC06237.1| AGAMOUS homolog [Populus trichocarpa]
gi|222848012|gb|EEE85559.1| predicted protein [Populus trichocarpa]
gi|384095955|gb|AFH66690.1| flowering locus C [Populus simonii x Populus nigra]
Length = 241
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN +R +TF KR SG+ KKA +E LC V I G + + N
Sbjct: 18 RGKVEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 74
Query: 68 DNIHPLVKAYSHARINELN 86
D++ ++ Y A + N
Sbjct: 75 DSVKSTIERYKKASADSSN 93
>gi|356566858|ref|XP_003551643.1| PREDICTED: agamous-like MADS-box protein AGL6-like [Glycine max]
Length = 239
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+K+IEN+ +R +TFSKR +G+ KKA E+ LC V + G D
Sbjct: 3 RGKVELKRIENKINRQVTFSKRRNGLVKKAKEL---SVLCDAEVALVIFSARGKPFTFPD 59
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+ ++K Y R + QH ++ +L+ + Q MLK
Sbjct: 60 DAESIMKTYDRYR-KYYSHQHGNI--ELENQDWYQEMLK 95
>gi|225458107|ref|XP_002279735.1| PREDICTED: floral homeotic protein DEFICIENS [Vitis vinifera]
gi|125616882|gb|ABN46893.1| AP3-like MADS-box protein [Vitis labrusca x Vitis vinifera]
gi|302142587|emb|CBI19790.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKASE+ LC V I
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIFKKASEL---TVLCDAKVSII 46
>gi|410945808|gb|AFV94641.1| truncated flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|410945810|gb|AFV94642.1| truncated flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|410945812|gb|AFV94643.1| truncated flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|410945814|gb|AFV94644.1| truncated flowering locus C [Arabidopsis lyrata subsp. petraea]
Length = 162
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVDTLVQLE 121
>gi|284178634|gb|ADB81899.1| MIKC* MADS-box transcription factor [Sphagnum subsecundum]
Length = 387
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDVALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVITRFANLPLHERNKSFEDMLTRF 88
>gi|23194453|gb|AAN15183.1| MADS box protein GHMADS-2 [Gossypium hirsutum]
gi|122938397|gb|ABM69044.1| MADS-box protein MADS6 [Gossypium hirsutum]
gi|207298817|gb|ACI23560.1| agamous-like protein 1 [Gossypium barbadense]
Length = 223
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+NI + Y A + E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NNIRSTIDRYKKACSDTSNTNTVTEINAQY--------YQQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L ++EL Q+++ ++
Sbjct: 112 MGDSLSSLTVKELKQVENRLE 132
>gi|333827677|gb|AEG19541.1| apetala3-like protein [Vitis labrusca x Vitis vinifera]
Length = 226
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKASE+ LC V I
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIFKKASEL---TVLCDAKVSII 46
>gi|183014295|dbj|BAG24495.1| PLENA-like MADS-box protein [Torenia fournieri]
Length = 260
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 16 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 72
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + V +
Sbjct: 73 NSVRDTIDRYKKATSDSSNSMSTSEANTQFYQQEAAKLRRQIREIQNSNRQILGEGVTSM 132
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
L+EL M+S V+ +K NE
Sbjct: 133 PLKELKNMESKVEKAISRIHSKKNE 157
>gi|158853186|dbj|BAF91445.1| PI/GLO-related transcription factor CONTORTED [Ipomoea nil]
Length = 212
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN +R +TFSKR +G+ KKA EI LC V I G M + +
Sbjct: 3 RGRIEIKRIENSSNRQVTFSKRRNGMLKKAKEIS---VLCDARVSVIIFGSSGKMHEFSS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y L + +H +L +++ +KE NM ++R +K +
Sbjct: 60 SSLVDILDQYHKLTGKRLWDAKHENLENEINRIKKENDNMQIELRHLK-------GEDIS 112
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINEK 153
LN +EL+ ++ A+ Q L I+EK
Sbjct: 113 SLNYRELMILEDAL----QNGLRSISEK 136
>gi|238481232|ref|NP_001154703.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
gi|146428564|gb|ABQ40363.1| flowering locus C beta splice variant [Arabidopsis thaliana]
gi|332004117|gb|AED91500.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|126023786|gb|ABN71371.1| flowering-related B-class MADS-box protein APETALA3 [Vitis
vinifera]
gi|269116070|gb|ACZ26526.1| apetala3 [Vitis vinifera]
Length = 226
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKASE+ LC V I
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIFKKASEL---TVLCDAKVSII 46
>gi|15238067|ref|NP_196576.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
gi|17432959|sp|Q9S7Q7.1|FLC_ARATH RecName: Full=MADS-box protein FLOWERING LOCUS C; AltName:
Full=MADS-box protein FLOWERING LOCUS F
gi|4469408|gb|AAD21248.1| MADS box protein FLOWERING LOCUS F [Arabidopsis thaliana]
gi|4469410|gb|AAD21249.1| MADS box protein FLOWERING LOCUS F [Arabidopsis thaliana]
gi|7960733|emb|CAB92055.1| MADS box protein FLOWERING LOCUS F (FLF) [Arabidopsis thaliana]
gi|22653434|gb|AAN04056.1| flowering locus C protein [Arabidopsis thaliana]
gi|51873205|tpg|DAA01051.1| TPA_exp: flowering time protein [Arabidopsis thaliana]
gi|55417904|gb|AAV51218.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417906|gb|AAV51219.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417908|gb|AAV51220.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417910|gb|AAV51221.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417912|gb|AAV51222.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417914|gb|AAV51223.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417916|gb|AAV51224.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417918|gb|AAV51225.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417920|gb|AAV51226.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417922|gb|AAV51227.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417924|gb|AAV51228.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417926|gb|AAV51229.1| flowering locus C protein [Arabidopsis thaliana]
gi|55417928|gb|AAV51230.1| flowering locus C protein [Arabidopsis thaliana]
gi|62632897|gb|AAX89409.1| flowering locus C protein [Arabidopsis thaliana]
gi|62632899|gb|AAX89410.1| flowering locus C protein [Arabidopsis thaliana]
gi|62632901|gb|AAX89411.1| flowering locus C protein [Arabidopsis thaliana]
gi|62632903|gb|AAX89412.1| flowering locus C protein [Arabidopsis thaliana]
gi|62632906|gb|AAX89413.1| flowering locus C protein [Arabidopsis thaliana]
gi|149944349|gb|ABR46217.1| At5g10140 [Arabidopsis thaliana]
gi|332004115|gb|AED91498.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
gi|343408942|gb|AEM06910.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408944|gb|AEM06911.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408946|gb|AEM06912.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408948|gb|AEM06913.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408950|gb|AEM06914.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408952|gb|AEM06915.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408954|gb|AEM06916.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408956|gb|AEM06917.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408958|gb|AEM06918.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408960|gb|AEM06919.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408962|gb|AEM06920.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408964|gb|AEM06921.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408966|gb|AEM06922.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408968|gb|AEM06923.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408970|gb|AEM06924.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408972|gb|AEM06925.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408974|gb|AEM06926.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408976|gb|AEM06927.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408978|gb|AEM06928.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408980|gb|AEM06929.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408982|gb|AEM06930.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408986|gb|AEM06932.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408988|gb|AEM06933.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408990|gb|AEM06934.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408992|gb|AEM06935.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408994|gb|AEM06936.1| flowering locus C protein [Arabidopsis thaliana]
gi|343408996|gb|AEM06937.1| flowering locus C protein [Arabidopsis thaliana]
gi|343409000|gb|AEM06938.1| flowering locus C protein [Arabidopsis thaliana]
gi|343409002|gb|AEM06939.1| flowering locus C protein [Arabidopsis thaliana]
gi|343409004|gb|AEM06940.1| flowering locus C protein [Arabidopsis thaliana]
gi|343409006|gb|AEM06941.1| flowering locus C protein [Arabidopsis thaliana]
gi|407914507|gb|AFU51407.1| FLC [Arabidopsis thaliana]
gi|407914508|gb|AFU51408.1| FLC [Arabidopsis thaliana]
gi|407914509|gb|AFU51409.1| FLC [Arabidopsis thaliana]
gi|407914510|gb|AFU51410.1| FLC [Arabidopsis thaliana]
gi|407914511|gb|AFU51411.1| FLC [Arabidopsis thaliana]
gi|407914512|gb|AFU51412.1| FLC [Arabidopsis thaliana]
gi|407914513|gb|AFU51413.1| FLC [Arabidopsis thaliana]
gi|407914514|gb|AFU51414.1| FLC [Arabidopsis thaliana]
gi|407914515|gb|AFU51415.1| FLC [Arabidopsis thaliana]
gi|407914516|gb|AFU51416.1| FLC [Arabidopsis thaliana]
gi|407914517|gb|AFU51417.1| FLC [Arabidopsis thaliana]
gi|407914518|gb|AFU51418.1| FLC [Arabidopsis thaliana]
gi|407914520|gb|AFU51420.1| FLC [Arabidopsis thaliana]
gi|407914521|gb|AFU51421.1| FLC [Arabidopsis thaliana]
gi|407914523|gb|AFU51423.1| FLC [Arabidopsis thaliana]
gi|407914524|gb|AFU51424.1| FLC [Arabidopsis thaliana]
Length = 196
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRYG--------KQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|5805226|gb|AAD51895.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPDTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|242060612|ref|XP_002451595.1| hypothetical protein SORBIDRAFT_04g004410 [Sorghum bicolor]
gi|241931426|gb|EES04571.1| hypothetical protein SORBIDRAFT_04g004410 [Sorghum bicolor]
Length = 329
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KKT R+KIE+K I+ + R + FSKR G+YKKASE+ +
Sbjct: 34 KKTLGRRKIEIKPIKCMEARHVCFSKRRDGLYKKASELCALTGAKVALIVFSPAGKPYSF 93
Query: 48 CQPSVKAIANRFL 60
PSV A+ +R+L
Sbjct: 94 GHPSVSAVVDRYL 106
>gi|189099171|gb|ACD76827.1| SHATTERPROOF1-like protein [Capsella bursa-pastoris]
Length = 250
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+ KK R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G
Sbjct: 12 SSKKIVGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRG 68
Query: 62 -MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+ + N+++ ++ Y A + +N ++E + +Q+R ++ +
Sbjct: 69 RLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIV 128
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LN +EL ++ ++ +K NE A
Sbjct: 129 GESLGSLNFKELKNLEGRLEKGISRVRSKKNEMLVA 164
>gi|116831597|gb|ABK28751.1| unknown [Arabidopsis thaliana]
Length = 203
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V A+ G + + +
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELS---VLCDAQVAAMIFSQKGRLYEFAS 59
Query: 68 DNIHPLVKAYSH-------ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+I +K Y+ A + + Q L +KE M+K++ ++ +
Sbjct: 60 SDIRNTIKRYAEYKREYFVAETHPIEQYVQGL------KKEMVTMVKKIEVLEVHNRKMM 113
Query: 121 ETPVDELNLQELLQMDSAVD-DLHQTFLAK 149
+D +++EL ++ + ++ LH L K
Sbjct: 114 GQSLDSCSVKELSEIATQIEKSLHMVRLRK 143
>gi|351727234|ref|NP_001236130.1| MADS domain transporter AGL11 [Glycine max]
gi|87138095|gb|ABD28284.1| MADS domain transporter AGL11 [Glycine max]
Length = 222
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+NI ++ Y A
Sbjct: 60 NNIRSTIERYKKA 72
>gi|145334799|ref|NP_001078745.1| MADS-box protein [Arabidopsis thaliana]
gi|91807022|gb|ABE66238.1| MADS-box protein [Arabidopsis thaliana]
gi|332008754|gb|AED96137.1| MADS-box protein [Arabidopsis thaliana]
Length = 202
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V A+ G + + +
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELS---VLCDAQVAAMIFSQKGRLYEFAS 59
Query: 68 DNIHPLVKAYSH-------ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+I +K Y+ A + + Q L +KE M+K++ ++ +
Sbjct: 60 SDIRNTIKRYAEYKREYFVAETHPIEQYVQGL------KKEMVTMVKKIEVLEVHNRKMM 113
Query: 121 ETPVDELNLQELLQMDSAVD-DLHQTFLAK 149
+D +++EL ++ + ++ LH L K
Sbjct: 114 GQSLDSCSVKELSEIATQIEKSLHMVRLRK 143
>gi|399950147|gb|AFP65758.1| GLO-like protein 1 [Iris fulva]
Length = 210
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + F +L
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREIS---VLCEAQVSVVI--FSNSGKLSDY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ +++ Y +L + +H +L Q+D +KE NM ++R +K
Sbjct: 58 CSANTSLPKILERYQLNCGKKLWDAKHENLSAQIDRVKKENDNMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 --LNSLNPKELIPIEEALQN 130
>gi|1384044|dbj|BAA04665.1| APETALA3 [Arabidopsis thaliana]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|237701185|gb|ACR16053.1| GLOBOSA-like MADS-box transcription factor [Spiranthes odorata]
Length = 210
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ ++ A+ Q L+ + +K
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLSSVRDK 138
>gi|15242208|ref|NP_199999.1| MADS-box protein [Arabidopsis thaliana]
gi|10177885|dbj|BAB11255.1| MADS box transcription factor-like protein [Arabidopsis thaliana]
gi|32402406|gb|AAN52785.1| MADS-box protein AGL72 [Arabidopsis thaliana]
gi|332008753|gb|AED96136.1| MADS-box protein [Arabidopsis thaliana]
Length = 211
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN R +TFSKR SG++KKA E+ LC V A+ G + + +
Sbjct: 3 RGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELS---VLCDAQVAAMIFSQKGRLYEFAS 59
Query: 68 DNIHPLVKAYSH-------ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+I +K Y+ A + + Q L +KE M+K++ ++ +
Sbjct: 60 SDIRNTIKRYAEYKREYFVAETHPIEQYVQGL------KKEMVTMVKKIEVLEVHNRKMM 113
Query: 121 ETPVDELNLQELLQMDSAVD-DLHQTFLAK 149
+D +++EL ++ + ++ LH L K
Sbjct: 114 GQSLDSCSVKELSEIATQIEKSLHMVRLRK 143
>gi|417063|sp|Q03416.1|GLOB_TOBAC RecName: Full=Floral homeotic protein GLOBOSA
gi|19871|emb|CAA48142.1| NTGLOBOSA [Nicotiana tabacum]
gi|448288|prf||1916408A NTGLO gene
Length = 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G M + +
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVIIFASSGKMHEFSS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y L + +H +L ++++ +K+ NM ++R +K +
Sbjct: 60 TSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLK-------GEDIT 112
Query: 126 ELNLQELLQMDSAVDD 141
LN +EL+ ++ A+D+
Sbjct: 113 SLNHRELMMLEDALDN 128
>gi|341958491|gb|AEL13789.1| AGAMOUS [Taxus baccata]
Length = 223
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TF KR +G+ KKA E+ LC V I F ++H
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLMKKACELSV---LCDAEVAVIV--FSTRGRVHEF 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK---QMRRVKETQPRWWETPVD 125
H + K + + + + + + + QQ K Q+ ++ T R +
Sbjct: 58 ANHSMKKTIERYKKASADNSYGGTITEANTQYWQQEAXKLRQQIENLENTNRRLLGDGIT 117
Query: 126 ELNLQELLQMDSAVDDLH 143
+ ++L Q++ +D H
Sbjct: 118 NMKQKDLKQLEQKIDKAH 135
>gi|357116276|ref|XP_003559908.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Brachypodium
distachyon]
Length = 257
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 16/68 (23%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+KI +K+IE+E+DR + FSKR G++KK +E+ A+ L PSV
Sbjct: 11 RRKIAIKRIESEEDRQVCFSKRQIGLFKKVTELSVLCGMQVAVVVFSPAGNALSLGHPSV 70
Query: 53 KAIANRFL 60
++ +R L
Sbjct: 71 DSVVDRLL 78
>gi|305862051|gb|ADM72965.1| PISTILLATA-like protein 2b [Platanus x acerifolia]
gi|305862056|gb|ADM72968.1| PISTILLATA-like protein 2b [Platanus x acerifolia]
Length = 200
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVNLIIFSSSGKMSEYHS 59
Query: 68 DNIH-----PLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+I + YS R+ + +H L +LD +KE NM ++R +K
Sbjct: 60 PSITMTEILDMYHKYSGQRL--WDAKHEFLSNELDRIKKENDNMQIELRHLK 109
>gi|60100358|gb|AAX13306.1| MADS box protein AGL11 [Lotus japonicus]
gi|388513815|gb|AFK44969.1| unknown [Lotus japonicus]
Length = 223
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+NI ++ Y A
Sbjct: 60 NNIRSTIERYKKA 72
>gi|224286511|gb|ACN40962.1| unknown [Picea sitchensis]
Length = 188
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI+M +IEN R +TFSKR +G+ KKA +E LC V + F +LH
Sbjct: 3 RGKIQMTRIENAARRQVTFSKRNNGLLKKA---YELSVLCDAEVGLMI--FSPGGKLHEF 57
Query: 67 -NDNIHPLVKAYSHA-RINELN-QQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N ++ +++ Y R N +N +Q + L +E NM ++R +K T +
Sbjct: 58 ANPSMEKMLEKYREGSRENSINKEQDTEYLN-----REIANMEARIRILKSTHRKMLGED 112
Query: 124 VDELNLQELLQMD 136
++ +++EL Q+D
Sbjct: 113 LETCSMEELDQLD 125
>gi|82775194|emb|CAI61983.1| AGAMOUS protein [Impatiens balsamina]
Length = 256
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
++G++ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V +
Sbjct: 14 ISGQRKNGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSR 70
Query: 61 G-MSQLHNDNIHPLVKAYSHA 80
G + + N+++ ++ Y A
Sbjct: 71 GRLYEYANNSVRGTIERYKKA 91
>gi|334187573|ref|NP_001190272.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
gi|61661331|gb|AAX51271.1| flowering locus C protein [Arabidopsis thaliana]
gi|332004118|gb|AED91501.1| MADS-box protein FLOWERING LOCUS C [Arabidopsis thaliana]
Length = 182
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRYG--------KQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|392522068|gb|AFM77904.1| MADS-box protein AGL24 [Brassica juncea]
Length = 222
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 39/169 (23%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N R +TFSKR GI KKA+E+ LC V I
Sbjct: 3 REKIRIKKIDNLTARQVTFSKRRRGIIKKANELS---ILCDADVALIIFSATGKLFEFSS 59
Query: 57 ---NRFLGMSQLHNDNIHPLVKAYS--HARINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
LG LH NI+ ++ S H +++ N L +L +E E + KQ+R+
Sbjct: 60 SSMRDILGRYNLHASNINKMMGPPSPYHQQLDNCN------LSRLSKEVEDKT--KQLRQ 111
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
++ ++ LNL+EL +++ ++ ++ L++++EK S
Sbjct: 112 MRGGD-------LEGLNLEELQRLEKSL----ESGLSRVSEKKGECVMS 149
>gi|51849651|dbj|BAD42357.1| PISTILLATA-like protein [Nuphar japonica]
Length = 217
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 23/146 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN +R +TFSKR GI KKA EI LC V I F +L+N
Sbjct: 3 RGKIEIKRIENASNRQVTFSKRKQGILKKAKEISV---LCDAQVSLIL--FSSAGKLYNY 57
Query: 68 ----DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
++ ++ Y + +L + +H L +LD KE +NM ++R +
Sbjct: 58 CSPSSSLKDILTRYQKSSGKKLWDARHEYLSTELDRIRKENENMQIELR-------HFMG 110
Query: 122 TPVDELNLQELLQMDSAV----DDLH 143
+ L +QEL ++ ++ D++H
Sbjct: 111 EDLSSLTVQELRALEDSLQIGFDNVH 136
>gi|270002590|gb|EEZ99037.1| hypothetical protein TcasGA2_TC004911 [Tribolium castaneum]
Length = 352
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 157 GKKTKGRVKIKMEYIENKLRRYTTFSKRKTGIMKKAYEL 195
>gi|158563747|gb|ABW74343.1| PISTILLATA-1 [Brassica napus]
Length = 208
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALIV 47
>gi|212656635|gb|ACJ36229.1| NGL9 [Medicago truncatula]
Length = 180
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR SGI KKA EI LC V I + S ++
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKSGILKKAKEINV---LCDAQVSTI---IIAPSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P +++ Y A L + +H +L ++++ +KE ++M Q+R +K
Sbjct: 57 YISPSTTLIDMLERYHKASGKRLWDAKHENLKNEIEKLKKENEDMQIQLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
++ LN ++L+ ++ +++
Sbjct: 110 GKDINTLNYKKLMSLEDVLEN 130
>gi|29372746|emb|CAD23407.1| putative MADS-domain transcription factor [Zea mays]
Length = 273
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 37/197 (18%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
++ + R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G +
Sbjct: 44 RQGQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRL 100
Query: 63 SQLHNDNIHPLVKAYSHAR--------INELN----QQHNDLLRQLDEEKEQQNM----- 105
+ N+++ ++ Y A + E+N QQ + LRQ+ + N
Sbjct: 101 YEYANNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNANTRNIVG 160
Query: 106 ----------LKQM-----RRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF-LAK 149
LKQM + + + + R E E++ + +MD D+++ T +A+
Sbjct: 161 DSIHTMGLRDLKQMEGKLEKAISKIRARKNELLYAEVDYMQKREMDLQTDNMYLTSKIAE 220
Query: 150 INEKTAAAAASSSVAPP 166
NE A V PP
Sbjct: 221 SNETGQPAMHMMGVPPP 237
>gi|284178632|gb|ADB81898.1| MIKC* MADS-box transcription factor [Sphagnum subsecundum]
Length = 440
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDIGLIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVITRFANLPLHERNKSFEDMLTRF 88
>gi|5805238|gb|AAD51901.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRVGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|145845945|gb|ABP96967.1| flowering locus C protein [Sinapis alba]
Length = 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH+D L+ LD + + N ++ + + E+ +
Sbjct: 60 GDNLVKILDRYG--------KQHDDDLKALDRQSKPLNCGSHHELLELVESKLEESNDNN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSVGSLVQLE 121
>gi|58429215|gb|AAW78034.1| APETALA3-like protein [Thalictrum dioicum]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I + S ++
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRAGIVKKAKEL---TVLCDTQVSLI---MISTSGKIHE 56
Query: 69 NIHP------LVKAYSHAR-INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P L Y A IN Q+ + L + KE N L+ KE + R E
Sbjct: 57 YISPSCTHKNLYDKYQQASGINIWQPQYERMQDNLQKLKEINNKLR-----KEIRQRNGE 111
Query: 122 TPVDELNLQELLQMD 136
+DELN Q+L ++
Sbjct: 112 D-LDELNFQQLCGLE 125
>gi|414884020|tpg|DAA60034.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 146
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEV--AI-LCDAQIGVII--FSGSGRMYEY 57
Query: 69 NIHP 72
+ P
Sbjct: 58 SSPP 61
>gi|46020020|dbj|BAD13496.1| MADS-box protein [Asparagus officinalis]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 29/148 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + G +S +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAQVSVLIFSSSGKISDYCS 59
Query: 68 DNIHPLVKAYSHARINELNQQ----------HNDLLRQLDE-EKEQQNMLKQMRRVK--E 114
N S +RI E QQ H L Q+D +KE NM ++R +K +
Sbjct: 60 ANT-------SFSRILERYQQNCGKKLWDANHESLSAQIDRIKKENDNMQIKLRHLKGED 112
Query: 115 TQPRWWETPVDELNLQELLQ--MDSAVD 140
P TP + + ++++LQ +DS D
Sbjct: 113 LNPL---TPKELIPIEDVLQNGLDSVRD 137
>gi|260729999|gb|ABW96391.2| PI-related protein [Dendrobium moniliforme]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|297719721|ref|NP_001172222.1| Os01g0201700 [Oryza sativa Japonica Group]
gi|255672978|dbj|BAH90952.1| Os01g0201700 [Oryza sativa Japonica Group]
Length = 154
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 43 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 99
Query: 68 DNIHPLVKAYSHAR--------INELNQQH 89
+++ V+ Y A + E+N QH
Sbjct: 100 NSVKSTVERYKKANSDTSNSGTVAEVNAQH 129
>gi|158563751|gb|ABW74344.1| PISTILLATA-2 [Brassica napus]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEI---TVLCDAKVALIV 47
>gi|224459194|gb|ACN43332.1| serum response factor [Tribolium castaneum]
Length = 291
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 139 GKKTKGRVKIKMEYIENKLRRYTTFSKRKTGIMKKAYEL 177
>gi|73972885|ref|XP_852302.1| PREDICTED: serum response factor isoform 2 [Canis lupus familiaris]
Length = 508
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 196
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 197 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 256
Query: 100 KEQQNMLKQMRRV 112
E ++ LKQ V
Sbjct: 257 GETKDTLKQAFTV 269
>gi|305862050|gb|ADM72964.1| PISTILLATA-like protein 2a [Platanus x acerifolia]
gi|305862054|gb|ADM72967.1| PISTILLATA-like protein 2a [Platanus x acerifolia]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVNLIIFSSSGKMSEYHS 59
Query: 68 DNIH-----PLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+I + YS R+ + +H L +LD +KE NM ++R +K
Sbjct: 60 PSITMTEILDMYHKYSGQRL--WDAKHEFLSNELDRIKKENDNMQIELRHLK 109
>gi|284178656|gb|ADB81910.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 415
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDVDVALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVIGRFANLPMHERNKSFEDMLTRF 88
>gi|15022157|gb|AAK77938.1| MADS box protein-like protein NGL9 [Medicago sativa]
Length = 212
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR SGI KKA+EI LC V I F ++H +
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKSGILKKANEINV---LCDAQVSTII--FAPSGKMH-E 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
I P +++ Y A L + +H +L ++++ +KE ++M ++R +K
Sbjct: 57 YISPSTTLIDMLERYQKASGKRLWDAKHENLRNEIEKLKKENEDMEIKLRHLK------- 109
Query: 121 ETPVDELNLQELLQMDSAVDD 141
++ LN ++L+ ++ +++
Sbjct: 110 GKDINTLNYKKLMSLEDVLEN 130
>gi|305862062|gb|ADM72971.1| PISTILLATA-like protein 4 [Platanus x acerifolia]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVNLIIFSSSGKMSEYHS 59
Query: 68 DNIH-----PLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+I + YS R+ + +H L +LD +KE NM ++R +K
Sbjct: 60 PSITMTEILGMYHKYSGQRL--WDAKHEFLSNELDRIKKENDNMQIELRHLK 109
>gi|147782516|emb|CAN63992.1| hypothetical protein VITISV_011788 [Vitis vinifera]
Length = 196
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 73 LVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELNLQEL 132
L +A+ A + +LN Q +L QL+ EK++ L QM++ + Q WW P++EL+ ++L
Sbjct: 74 LFEAHRSANVRDLNMQLTQVLNQLEGEKKRGEALTQMKKASQAQ-YWWAAPIEELSFEQL 132
Query: 133 LQMDSAVDDL 142
+ ++++L
Sbjct: 133 ELLKVSLENL 142
>gi|168020149|ref|XP_001762606.1| MIKC MADS-domain protein PpMADS3 [Physcomitrella patens subsp.
patens]
gi|42602135|gb|AAS21675.1| putative MADS-domain transcription factor [Physcomitrella patens]
gi|162686339|gb|EDQ72729.1| MIKC MADS-domain protein PpMADS3 [Physcomitrella patens subsp.
patens]
Length = 416
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +TFSKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTFSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEEVIARFANLPMHERNKSFEDML 85
>gi|224159063|ref|XP_002338040.1| predicted protein [Populus trichocarpa]
gi|222870494|gb|EEF07625.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 29/33 (87%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
RQKIE+KK++ E +R +TFSKR +G++KKA+E+
Sbjct: 2 RQKIEIKKVQKESNRYVTFSKRKNGLFKKATEL 34
>gi|189099161|gb|ACD76822.1| SEEDSTICK-like protein [Capsella bursa-pastoris]
Length = 72
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA 80
+NI ++ Y A
Sbjct: 60 NNIRSTIERYKKA 72
>gi|67043456|gb|AAY63867.1| PISTILLATA [Brassica juncea]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALIV 47
>gi|449506490|ref|XP_004162764.1| PREDICTED: MADS-box protein SOC1-like [Cucumis sativus]
Length = 218
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+EMK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKVEMKRIENSTSRQVTFSKRRNGLLKKA---YELSVLCDAEVSVIIFSQKGRLYEFSS 59
Query: 68 DNIHPLVKAY-SHARINELNQ-QHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y H + + N + ++QL +E E K++ +++++Q + +D
Sbjct: 60 SDMQKTIERYRKHGKDGQSNPFRSEGYMQQLKQEAEM--TAKKIEQLEKSQQKLLGRGLD 117
Query: 126 ELNLQELLQMD 136
+ +E+ +++
Sbjct: 118 SCSFEEIREIE 128
>gi|387864350|gb|AFK09612.1| pistillata [Arabidopsis halleri subsp. gemmifera]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|300252253|gb|ADJ96374.1| MADS protein [Gossypium hirsutum]
Length = 230
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I F + H +
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRNGIFKKAQEL---TVLCDAKVSLIM--FSSTGKFH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW-WETPVDEL 127
I P + + + + + + ++ +E LK++ + + R +D+L
Sbjct: 57 FISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKSRREIRQRMGGDLDDL 116
Query: 128 NLQELLQMDSAVD 140
N++EL +++ +D
Sbjct: 117 NIKELQALEAKMD 129
>gi|237701157|gb|ACR16039.1| GLOBOSA-like MADS-box transcription factor [Gongora galeata]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|449517951|ref|XP_004166007.1| PREDICTED: agamous-like MADS-box protein AGL11-like isoform 2
[Cucumis sativus]
gi|4103342|gb|AAD01742.1| agamous-like putative transcription factor [Cucumis sativus]
Length = 225
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
++I ++ Y A + ELN Q+ ++E + +Q++ ++ +
Sbjct: 60 NSIKTTIERYKKACSDSSATSSVTELNTQY--------YQQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L ++EL Q+++ ++
Sbjct: 112 MGDSLSALTVKELKQLENRLE 132
>gi|323387826|gb|ADX60056.1| transcription factor TM6 [Gossypium hirsutum]
Length = 224
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I F + H +
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTV---LCDAKVSLIM--FSSTGKFH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM-RRVKETQPRWWETPVDEL 127
I P + + + + + + ++ +E LK++ ++++ + +D+L
Sbjct: 57 FISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKLRREIRQRMGGDLDDL 116
Query: 128 NLQELLQMDSAVD 140
N++EL +++ +D
Sbjct: 117 NIKELQALEAKMD 129
>gi|305862046|gb|ADM72962.1| PISTILLATA-like protein 1 [Platanus x acerifolia]
gi|305862048|gb|ADM72963.1| PISTILLATA-like protein 1 [Platanus x acerifolia]
gi|305862060|gb|ADM72970.1| PISTILLATA-like protein 3 [Platanus x acerifolia]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVNLIIFSSSGKMSEYHS 59
Query: 68 DNIH-----PLVKAYSHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+I + YS R+ + +H L +LD +KE NM ++R +K
Sbjct: 60 PSITMTEILDMYHKYSGQRL--WDAKHEFLSNELDRIKKENDNMQIELRHLK 109
>gi|189214373|gb|ACD85121.1| B-class MADS-box protein PI [Phaius tancarvilleae]
Length = 210
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|297808095|ref|XP_002871931.1| pistillata [Arabidopsis lyrata subsp. lyrata]
gi|297317768|gb|EFH48190.1| pistillata [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|58429209|gb|AAW78031.1| PISTILLATA-like protein [Thalictrum dioicum]
Length = 211
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR SGI KKA EI LC+ + + G MS+ +
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRSGILKKAREIHV---LCEAQIALVIFSSTGKMSEYIS 59
Query: 68 DNIHP-----LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
+ P ++ Y + +L + +H L +LD +KE +M ++R +K
Sbjct: 60 PSPGPSTLIGILDKYQKSSGKKLWDAKHEYLSSELDRIKKENDSMQIELRHLKGED---- 115
Query: 121 ETPVDELNLQELLQMDSAV 139
+ LN +EL+ ++ A+
Sbjct: 116 ---ITSLNAKELIPIEEAL 131
>gi|118344006|ref|NP_001071826.1| transcription factor protein [Ciona intestinalis]
gi|70571279|dbj|BAE06714.1| transcription factor protein [Ciona intestinalis]
Length = 335
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI M+ IEN+ R TFSKR SGI KKA E+
Sbjct: 58 GKKTRGRVKINMEFIENKLRRYTTFSKRKSGIMKKAHEL 96
>gi|410945818|gb|AFV94646.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
gi|410945820|gb|AFV94647.1| flowering locus C [Arabidopsis lyrata subsp. petraea]
Length = 196
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + +++ S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASSKLYSFSS 59
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y +QH D L+ LD + + N ++ + + + V
Sbjct: 60 --GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGSHHELLELVESKLVGSNV 109
Query: 125 DELNLQELLQMD 136
+ +++ L+Q++
Sbjct: 110 NNVSVDTLVQLE 121
>gi|387864352|gb|AFK09613.1| pistillata [Arabidopsis halleri subsp. halleri]
Length = 208
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|189214323|gb|ACD85096.1| B-class MADS-box protein PI [Dendrobium hybrid cultivar]
Length = 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|168056327|ref|XP_001780172.1| ppma12 MIKC* MADS-domain protein PPMA12 [Physcomitrella patens
subsp. patens]
gi|162668405|gb|EDQ55013.1| ppma12 MIKC* MADS-domain protein PPMA12 [Physcomitrella patens
subsp. patens]
Length = 405
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KK +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENSTNRQVTYSKRRNGLIKK---TYELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+I ++ +++ +E N+ D+L ++ + + K R+++
Sbjct: 60 SSIEEVIGRFANLTAHERNKSFEDMLARISNSQMNHDPSKYTRKIE 105
>gi|82734201|emb|CAJ44134.1| plena protein [Misopates orontium]
Length = 238
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 14 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRLYEYAN 70
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + V +
Sbjct: 71 NSVRATIDRYKKASADSSNSVSTSEANTQFYQQEANKLRRQIREIQTSNRQMLGEGVGNM 130
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
L++L ++ V+ +K NE
Sbjct: 131 ALKDLKSTEAKVEKAISRIRSKKNE 155
>gi|189214343|gb|ACD85106.1| B-class MADS-box protein PI [Liparis distans]
Length = 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|408369207|gb|AFU61576.1| flowering locus C, partial [Brassica napus]
Length = 154
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC S+ + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLVEKARQLS---VLCDASIALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYSHARINELNQ-----------QHNDLLRQLDEEKEQQNML 106
DN+ ++ Y ++LN HN+LL +D + + N++
Sbjct: 60 GDNLVRILDRYGKQHADDLNALDLQSKALSYGSHNELLELVDSKLVESNVV 110
>gi|189214357|gb|ACD85113.1| B-class MADS-box protein PI [Oncidium hybrid cultivar]
gi|300078678|gb|ADJ67236.1| MADS box transcription factor 8 [Oncidium Gower Ramsey]
Length = 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|120407344|gb|ABM21529.1| MADS-box protein 10 [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKTDQPTLDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
++ L++ EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EELEGLSVDELQQLEKNLETGLHKVLQTKDQQFLEQINE 151
>gi|226897253|dbj|BAH56658.1| agamous-like protein [Eucalyptus grandis]
Length = 231
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYAN 75
Query: 68 DNIHPLVKAYSHA 80
D++ ++ Y A
Sbjct: 76 DSVKATIERYKKA 88
>gi|189214315|gb|ACD85092.1| B-class MADS-box protein PI [Brassavola nodosa]
Length = 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|284178650|gb|ADB81907.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 406
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDIALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEDVIGRFANLPMHERNKSFEDML 85
>gi|6707091|gb|AAF25591.1| pistillata [Arabidopsis lyrata]
gi|387864348|gb|AFK09611.1| pistillata [Arabidopsis kamchatica]
Length = 208
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|226897255|dbj|BAH56659.1| agamous-like protein [Eucalyptus grandis]
Length = 222
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
++I ++ Y A + E+N Q+ ++E + +Q++ ++ +
Sbjct: 60 NSIRSTIERYKKANSDSSNTSTVTEINAQY--------YQQESAKLRQQIQMLQNSNRHL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ L+++EL Q+++ ++
Sbjct: 112 MGDSLSSLSVKELKQLENRLE 132
>gi|297817192|ref|XP_002876479.1| hypothetical protein ARALYDRAFT_486333 [Arabidopsis lyrata subsp.
lyrata]
gi|297322317|gb|EFH52738.1| hypothetical protein ARALYDRAFT_486333 [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 3 GKKTKR--RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
G+ +K+ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V +
Sbjct: 10 GESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTR 66
Query: 61 G-MSQLHNDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
G + + N+++ ++ Y A + E N Q+ ++E + +Q+R
Sbjct: 67 GRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRD 118
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
++ + + LNL+EL ++ ++ +K NE A
Sbjct: 119 IQNSNRHIVGESLGSLNLKELKNLEGRLEKGISRVRSKKNELLVA 163
>gi|290350878|dbj|BAI78360.1| GLO-like MADS-box protein [Orchis italica]
Length = 211
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ ++ +++ Y +L + +H +L ++D +KE NM + R +K
Sbjct: 60 PSTSLSKMLEKYQQNSGKKLWDAKHENLSTEIDRIKKENDNMQIEPRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ ++ A+ Q LA + +K
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLAGVRDK 138
>gi|346214861|gb|AEO20234.1| SOC1-like protein [Spiraea cantoniensis]
Length = 221
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +M++IEN R +TFSKR SG+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMRRIENATSRQVTFSKRRSGLLKKA---FELSVLCDAEVALIIFSPRGKLYEFAS 59
Query: 68 DNIHPLVKAY-SHARINELN------QQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
++ ++ Y HA+ N+ N +Q+ LRQ E M+KQ+ ++ ++ +
Sbjct: 60 SSMQTTIERYQKHAKDNQTNNKSVASEQNTQHLRQ-----EASRMMKQIEILEGSKRKLL 114
Query: 121 ETPVDELNLQELLQMD 136
+ +L+EL +++
Sbjct: 115 GEGLASCSLEELQELE 130
>gi|53988171|gb|AAV28175.1| MADS box PI-like protein 9 [Phalaenopsis hybrid cultivar]
gi|56182389|gb|AAV83997.1| MADS box protein 6 [Phalaenopsis equestris]
Length = 210
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLGKMFEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLSKMLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ LN +EL+ ++ A+ +
Sbjct: 113 LNSLNPKELIPIEEALQN 130
>gi|71025326|gb|AAZ17549.1| MADS10 [Lolium perenne]
Length = 228
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKADQPSLDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
++ L + EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EGLEGLTVDELQQLEKNLETGLHRVLQTKDQQFLEQINE 151
>gi|384598219|gb|AFI23876.1| AGAMOUS1 [Thalictrum thalictroides]
gi|397310272|gb|AFO38186.1| AGAMOUS1 [Thalictrum thalictroides]
Length = 225
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N ++E + Q+ ++ + L
Sbjct: 60 NSVKKTIERYKKASTDSPNSGSVSEANVQFYQQEASKLRNQIASLQNHNRNLLGESLSNL 119
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL Q++ ++ AK NE
Sbjct: 120 NIRELKQIEKKIEGGISKIRAKKNE 144
>gi|225458762|ref|XP_002285097.1| PREDICTED: MADS-box transcription factor 3 [Vitis vinifera]
gi|302142239|emb|CBI19442.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+++KKIEN +R +TFSKR +G+ KKA +E LC V I G L +
Sbjct: 3 RVKLQIKKIENTTNRQVTFSKRRNGLIKKA---YELSVLCDVDVALIMFSPSGRVSLFSG 59
Query: 69 N--IHPLVKAYSHARINELNQQHND--LLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N I ++ Y + +E + HN L R L + K + N Q P ++ +
Sbjct: 60 NKSIEEIMTRYVNLPEHERGRLHNQEFLQRALGKLKSEANRTYQ----AAASPMSTDSQL 115
Query: 125 DELNLQELLQMDSAVDDLHQ 144
+E+ QE+L+ S +DD+ +
Sbjct: 116 EEIQ-QEILKYKSQLDDMQK 134
>gi|79332296|ref|NP_001032144.1| K-box region and MADS-box transcription factor family protein
[Arabidopsis thaliana]
gi|29165403|gb|AAO65311.1| MADS affecting flowering 3 variant II [Arabidopsis thaliana]
gi|107738143|gb|ABF83648.1| At5g65060 [Arabidopsis thaliana]
gi|332010611|gb|AED97994.1| K-box region and MADS-box transcription factor family protein
[Arabidopsis thaliana]
Length = 185
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 17/102 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
DN+ ++ Y H D L+ LD ++ +N L
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYL 91
>gi|342298416|emb|CBY05398.1| SHATTERPROOF1-like protein [Lepidium appelianum]
Length = 252
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 3 GKKTKR--RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
G+ +K+ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I
Sbjct: 10 GESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIIFSTR 66
Query: 61 G-MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
G + + N+++ ++ Y A + LN ++E + +Q+R ++ +
Sbjct: 67 GRLYEYANNSVRGTIERYKKACSDALNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LN +EL ++ ++ +K NE A
Sbjct: 127 VGESLGSLNYKELKNLEGRLEKGISRVRSKKNEMLVA 163
>gi|29165405|gb|AAO65312.1| MADS affecting flowering 3 variant III [Arabidopsis thaliana]
Length = 118
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 17/102 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQLS---ILCESSIAVVA--VSGSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
DN+ ++ Y H D L+ LD ++ +N L
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYL 91
>gi|225543470|ref|NP_001139383.1| serum response factor [Tribolium castaneum]
Length = 299
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 104 GKKTKGRVKIKMEYIENKLRRYTTFSKRKTGIMKKAYEL 142
>gi|40644770|emb|CAE53893.1| putative MADS-box transcription factor [Triticum aestivum]
Length = 179
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 12 IEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH---ND 68
IE+K+IEN +R +TF KR +G+ KKA +E LC V I F G +L+ N+
Sbjct: 1 IEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSGRGRLYEYSNN 55
Query: 69 NIHPLVKAY--------SHARINELNQQH 89
++ ++ Y S + E+N QH
Sbjct: 56 SVKATIERYKKATSDTSSAGTVAEINAQH 84
>gi|78146198|gb|ABB22780.1| PISTILLATA-like MADS box protein [Crocus sativus]
gi|78146206|gb|ABB22781.1| PISTILLATA-like MADS box protein [Crocus sativus]
Length = 210
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + LG MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREIS---VLCECEVSLVIFSSLGKMSEYCS 59
Query: 68 DN 69
N
Sbjct: 60 PN 61
>gi|357142072|ref|XP_003572450.1| PREDICTED: MADS-box transcription factor 7-like [Brachypodium
distachyon]
Length = 203
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGM 62
GK+ K+R K+E+++IE+ R + FSKR SG++KKA +E LC V I G
Sbjct: 25 GKRRKKRGKVELRRIEDRTSRQVRFSKRRSGLFKKA---FELSVLCDVEVALIVFSPAG- 80
Query: 63 SQLHNDNIHPLVKAYS 78
++P V + S
Sbjct: 81 ------RLYPFVSSES 90
>gi|357455509|ref|XP_003598035.1| MADS box protein [Medicago truncatula]
gi|355487083|gb|AES68286.1| MADS box protein [Medicago truncatula]
Length = 223
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+NI + Y A
Sbjct: 60 NNIRSTIDRYKKA 72
>gi|161158836|emb|CAM59076.1| MIKC-type MADS-box transcription factor WM29A [Triticum aestivum]
Length = 273
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
AG + R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I G
Sbjct: 33 AGSEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRG 89
Query: 62 -MSQLHNDNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ + N+++ ++ Y S + E+N Q+ ++E + +Q+ +
Sbjct: 90 RLYEYSNNSVKATIERYKKANSDTSSSGTVAEVNAQY--------YQQESSKLRQQISSL 141
Query: 113 KETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + R V + L++L Q++ ++ A+ NE
Sbjct: 142 QNSNSRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNE 182
>gi|413956057|gb|AFW88706.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 341
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHNDNI 70
K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++ +
Sbjct: 5 KVELKKIENPTNRQVTFSKRRMGLFKKANEV--AI-LCDAQIGVII--FSGSGRMYEYSS 59
Query: 71 HPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR-------WWETP 123
P A R + + +E QQ ++++M R+K+ + R +
Sbjct: 60 PPWRIASVFDRYLKAPST------RFEEMDIQQKIVQEMTRMKDERNRLRMIMAQYMAED 113
Query: 124 VDELNLQELLQMDSAVD-DLHQTFLAKINEKTA 155
+ ++Q+L ++ ++ L++ L KI E+ +
Sbjct: 114 LASFSVQDLSNLEQQIEFSLYKVRLRKIKERIS 146
>gi|387864354|gb|AFK09614.1| pistillata [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|357131851|ref|XP_003567547.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Brachypodium
distachyon]
Length = 302
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHL 47
+ + RQKI +K+I++E+ R + FSKR +G++KKASE+ +A
Sbjct: 7 RPSMGRQKIAIKRIDSEEARQVCFSKRRAGLFKKASELSVLCGAQVAAVVFSPAGKAFSF 66
Query: 48 CQPSVKAIANRFL 60
PSV + +R L
Sbjct: 67 GHPSVDVVVDRLL 79
>gi|302566818|gb|ADL41187.1| pistillata [Brassica napus]
Length = 109
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEI---TVLCDAKVALIV 47
>gi|284178644|gb|ADB81904.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 425
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDVALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVITRFANLPMHERNKSFEDMLTRF 88
>gi|158563756|gb|ABW74345.1| PISTILLATA-3 [Brassica napus]
Length = 171
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEI---TVLCDAKVALIV 47
>gi|125536084|gb|EAY82572.1| hypothetical protein OsI_37793 [Oryza sativa Indica Group]
gi|125578818|gb|EAZ19964.1| hypothetical protein OsJ_35555 [Oryza sativa Japonica Group]
Length = 201
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K++M++IEN R +TF KR G+ KKA E+ LC V I F +LH
Sbjct: 3 RGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSV---LCDADVGVII--FSSQGKLHEL 57
Query: 67 --NDNIHPLVKAY 77
N N+H LV+ Y
Sbjct: 58 ATNGNMHNLVERY 70
>gi|24414624|gb|AAN47199.1| MADS-box transcription factor PISTILLATA [Helianthus annuus]
Length = 167
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC +V + G +
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRKNGIIKKAKEI---TVLCDANVSLVIYGSSGKMYEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
N+ ++ Y N+L + +H +L ++D +KE ++M ++R +K
Sbjct: 60 PKTNLIDMLDRYQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLK-------GED 112
Query: 124 VDELNLQELLQMDSAVDD 141
+ LN +EL+ + A+++
Sbjct: 113 MTSLNYEELIGYEDALEN 130
>gi|5805432|gb|AAD51995.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|18424559|ref|NP_568952.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|30697641|ref|NP_851247.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|79331885|ref|NP_001032123.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|10176935|dbj|BAB10179.1| MADS box protein-like [Arabidopsis thaliana]
gi|15809905|gb|AAL06880.1| At2g45660/F17K2.19 [Arabidopsis thaliana]
gi|17528944|gb|AAL38682.1| unknown protein [Arabidopsis thaliana]
gi|17978861|gb|AAL47402.1| At2g45660/F17K2.19 [Arabidopsis thaliana]
gi|20465947|gb|AAM20159.1| unknown protein [Arabidopsis thaliana]
gi|32402390|gb|AAN52777.1| MADS-box protein AGL42 [Arabidopsis thaliana]
gi|332010189|gb|AED97572.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|332010190|gb|AED97573.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|332010191|gb|AED97574.1| protein agamous-like 42 [Arabidopsis thaliana]
Length = 210
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIEMKKIEN R +TFSKR +G+ KKA +E LC + I G + + +
Sbjct: 3 RGKIEMKKIENATSRQVTFSKRRNGLLKKA---YELSVLCDAQLSLIIFSQRGRLYEFSS 59
Query: 68 DNIHPLVKAY-----SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
++ ++ Y H N +Q H L+Q E +M+ ++ ++ + +
Sbjct: 60 SDMQKTIERYRKYTKDHETSNHDSQIHLQQLKQ-----EASHMITKIELLEFHKRKLLGQ 114
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
+ +L+EL ++DS + Q L K+ E+ A
Sbjct: 115 GIASCSLEELQEIDSQL----QRSLGKVRERKA 143
>gi|414586560|tpg|DAA37131.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 255
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEL--AI-LCDAQIGVII--FSGSGRMYEY 57
Query: 69 NIHP 72
+ P
Sbjct: 58 SSPP 61
>gi|284178646|gb|ADB81905.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 409
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDIALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVIGRFANLPMHERNKSFEDMLTRF 88
>gi|115487794|ref|NP_001066384.1| Os12g0206800 [Oryza sativa Japonica Group]
gi|91207150|sp|Q2QW55.2|MAD33_ORYSJ RecName: Full=MADS-box transcription factor 33; AltName:
Full=OsMADS33
gi|30313685|gb|AAO47710.1| transcription factor MADS33 [Oryza sativa Japonica Group]
gi|108862313|gb|ABA96134.2| Agamous-like MADS box protein AGL12, putative, expressed [Oryza
sativa Japonica Group]
gi|113648891|dbj|BAF29403.1| Os12g0206800 [Oryza sativa Japonica Group]
Length = 202
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K++M++IEN R +TF KR G+ KKA E+ LC V I F +LH
Sbjct: 3 RGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSV---LCDADVGVII--FSSQGKLHEL 57
Query: 67 --NDNIHPLVKAY 77
N N+H LV+ Y
Sbjct: 58 ATNGNMHNLVERY 70
>gi|15241299|ref|NP_197524.1| Floral homeotic protein PISTILLATA [Arabidopsis thaliana]
gi|1346724|sp|P48007.1|PIST_ARATH RecName: Full=Floral homeotic protein PISTILLATA; AltName:
Full=Transcription factor PI
gi|493620|dbj|BAA06465.1| PI protein [Arabidopsis thaliana]
gi|5805412|gb|AAD51985.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805414|gb|AAD51986.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805416|gb|AAD51987.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805420|gb|AAD51989.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805422|gb|AAD51990.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805426|gb|AAD51992.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805434|gb|AAD51996.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805438|gb|AAD51998.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|5805440|gb|AAD51999.1| floral homeotic protein PI [Arabidopsis thaliana]
gi|6468188|dbj|BAA87000.1| transcription factor PI [Arabidopsis thaliana]
gi|332005434|gb|AED92817.1| Floral homeotic protein PISTILLATA [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|144678951|gb|ABP01801.1| MADS transcription factor PI [Aquilegia vulgaris]
Length = 210
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 23/155 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIH-LCQPSVKAIANRFLG-----M 62
R KIE+K+IEN +R +T+SKR +GI KKA E IH LC + + G +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGILKKARE----IHILCGAEIALVIFSSTGKMSEYI 58
Query: 63 SQLHNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
S + ++ Y +L + +H L +LD +KE NM ++R +K
Sbjct: 59 SPPGPTTLIKILDKYQKTSGKKLWDAKHEYLSSELDRIKKENDNMQIELRHLKGED---- 114
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTA 155
++ LN +EL+ ++ A+ Q L+K+ +K +
Sbjct: 115 ---INSLNAKELIPIEEAL----QNGLSKVRDKKS 142
>gi|51832629|gb|AAU10471.1| MADS box protein 1 [Litchi chinensis]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN DR +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSDRQVTYSKRRNGIIKKAKEITV---LCDAKVSLII--FASSGKMH 55
>gi|22090622|dbj|BAC06831.1| MADS-box protein PpMADS3 [Physcomitrella patens subsp. patens]
Length = 320
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +TFSKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTFSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEEVIARFANLPMHERNKSFEDML 85
>gi|223950397|gb|ACN29282.1| unknown [Zea mays]
gi|413949239|gb|AFW81888.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 124
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDAEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRV 112
P S +RI E Q +H +L ++D +KE NM Q+R V
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRPV 108
>gi|116783919|gb|ABK23141.1| unknown [Picea sitchensis]
Length = 188
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI+M +IEN R +TFSKR +G+ KKA +E LC V + F +LH
Sbjct: 3 RGKIQMTRIENAARRQVTFSKRKNGLLKKA---YELSVLCDAEVGLMI--FSPGGKLHEF 57
Query: 67 -NDNIHPLVKAYSHA-RINELN-QQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N ++ +++ Y R N +N +Q + L +E NM ++R +K T +
Sbjct: 58 ANPSMEKMLEKYREGSRENSINKEQDTEYLN-----REIANMEARIRILKSTHRKMLGED 112
Query: 124 VDELNLQELLQMD 136
++ +++EL Q+D
Sbjct: 113 LETCSMEELDQLD 125
>gi|38680578|gb|AAR26626.1| MADS box transcription factor [Phalaenopsis equestris]
Length = 224
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN +R +T+SKR +GI KKA EI LC V I +F
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKAREI---TVLCDAEVSLIMFSSTGKFSEYCS 59
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
+ + + IN + Q+ +L L+ KE + + +RR E + R E +
Sbjct: 60 PSTETKKVFERYQQVSGINLWSSQYEKMLNTLNHSKE---INRNLRR--EVRQRMGE-DL 113
Query: 125 DELNLQELLQMDSAVDD 141
+ L+++EL ++ +D+
Sbjct: 114 EGLDIKELRGLEQNIDE 130
>gi|5805418|gb|AAD51988.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|5805424|gb|AAD51991.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|168029176|ref|XP_001767102.1| MIKC MADS-domain protein PPMA10 [Physcomitrella patens subsp.
patens]
gi|162681598|gb|EDQ68023.1| MIKC MADS-domain protein PPMA10 [Physcomitrella patens subsp.
patens]
Length = 422
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDVALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVITRFANLPMHERNKSFEDMLTRF 88
>gi|194695232|gb|ACF81700.1| unknown [Zea mays]
gi|414878323|tpg|DAA55454.1| TPA: zea AGAMOUS-like protein [Zea mays]
Length = 287
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
AG + R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G
Sbjct: 14 AGIASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRG 70
Query: 62 -MSQLHNDNIHPLVKAYSHARINELNQ-----QHNDLLRQLDEEKEQQNMLKQMRRVKET 115
+ + N+++ ++ Y A + +HN Q ++E + Q++ ++ T
Sbjct: 71 RLYEYANNSVKATIERYKKAHTVGSSSGPPLLEHNA---QQFYQQESAKLRNQIQMLQNT 127
Query: 116 QPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ +E AA
Sbjct: 128 NRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAA 168
>gi|380258649|gb|AFD36429.1| GLO-like MADS-BOX transcription factor [Canna indica]
gi|380258651|gb|AFD36430.1| PI-like MADS box transcription factor [Canna indica]
Length = 210
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R KIE+K+IEN +R +TFSKR +GI KKA EI +I LC+ V + G MS+
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREI--SI-LCEAQVSVVIFSSSGKMSEYRS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+ ++ +++ Y +L + +H L ++D +KE NM ++R +K
Sbjct: 60 PSTSLSEILERYQQNSGEKLWDAKHESLSAEIDRIKKENDNMQIELRHLK 109
>gi|284178652|gb|ADB81908.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 413
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + + G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALVMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+I ++ +++ +E N+ D++ + + + + K +R+V+
Sbjct: 60 CSIEEVIGRFANLPTHERNKSFEDMMTRFSNNQMRHDRSKYIRKVE 105
>gi|242074308|ref|XP_002447090.1| hypothetical protein SORBIDRAFT_06g028420 [Sorghum bicolor]
gi|241938273|gb|EES11418.1| hypothetical protein SORBIDRAFT_06g028420 [Sorghum bicolor]
Length = 257
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEL--AI-LCDAQIGVII--FSGSGRMYEY 57
Query: 69 NIHP---------LVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM 109
+ P +KA S R E++ Q +++++ K+++N L+ +
Sbjct: 58 SSPPWRIASIFDRYLKAPS-TRFEEMDIQQK-IIQEMTRMKDERNRLRMI 105
>gi|5805430|gb|AAD51994.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|4103757|gb|AAD03486.1| MADS1 [Corylus avellana]
Length = 242
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I F +L+
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIV--FSSRGRLYEY 72
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N ++ ++ Y A + N ++E + Q+R V+++ +
Sbjct: 73 ANNSSVKTTIERYKKACADSSNSGSVSEANTQFYQQEAAKLRGQIRSVQDSNRHMLGEAL 132
Query: 125 DELNLQELLQMDSAVDDLHQTFLAKINE 152
ELN +EL ++ ++ +K NE
Sbjct: 133 SELNFKELKNLEKNLEKGINRIRSKKNE 160
>gi|58429207|gb|AAW78030.1| AGAMOUS-like protein [Thalictrum dioicum]
Length = 226
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N ++E + Q+ ++ + L
Sbjct: 60 NSVKKTIERYKKASTDSPNSGSVSEANVQFYQQEASKLHNQIASLQNHNRNLLGESLSNL 119
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL Q++ ++ AK NE
Sbjct: 120 NIKELRQIEKKIEGGISKIRAKKNE 144
>gi|89892033|gb|ABD78856.1| MADS-box transcription factor PISTILLATA [Sophora tetraptera]
Length = 110
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G S ++
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRKNGILKKAKEITV---LCDAQVSLI---IFGSSGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
I P ++ Y A L + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDILDRYHKASGKRLWDAKHENLSNEIDRVKKENDSMQIELRHLK 109
>gi|5805428|gb|AAD51993.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>gi|168001054|ref|XP_001753230.1| ppm6 MIKC* MADS-domain protein PPM6 [Physcomitrella patens subsp.
patens]
gi|168001056|ref|XP_001753231.1| MIKC MADS-domain protein PPM6 [Physcomitrella patens subsp.
patens]
gi|66840959|emb|CAI39204.1| putative MADS-domain transcription factor [Physcomitrella patens]
gi|162695516|gb|EDQ81859.1| ppm6 MIKC* MADS-domain protein PPM6 [Physcomitrella patens subsp.
patens]
gi|162695517|gb|EDQ81860.1| MIKC MADS-domain protein PPM6 [Physcomitrella patens subsp.
patens]
Length = 410
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDIALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVIGRFANLPMHERNKSFEDMLTRF 88
>gi|289656943|gb|ADD14337.1| PISTILLATA [Spinacia oleracea]
Length = 203
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA+EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIIKKATEINV---LCDSMVSVVI--FANNGKMHAY 57
Query: 69 N-----IHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N + +++ Y + L + +H +L ++D +KE +M ++R + +
Sbjct: 58 NSPSTPVEDILEKYQNISGKRLWDAKHEELKNEIDRIKKENDDMRVELRHLNGEDIASLQ 117
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
P D L++ L + A ++ Q + K++EK
Sbjct: 118 YP-DLSRLEQALDIGIARNNDRQMEIYKMHEKNTT 151
>gi|168042001|ref|XP_001773478.1| MIKC MADS-domain protein PPMA11 [Physcomitrella patens subsp.
patens]
gi|162675180|gb|EDQ61678.1| MIKC MADS-domain protein PPMA11 [Physcomitrella patens subsp.
patens]
Length = 407
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDVDVALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N+ D+L +
Sbjct: 60 CSIEDVIGRFANLPMHERNKSLEDMLTRF 88
>gi|227202554|dbj|BAH56750.1| AT5G65060 [Arabidopsis thaliana]
Length = 138
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 17/102 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR G+ +KA ++ +I LC+ S+ +A G +L++
Sbjct: 3 RRKVEIKRIENKSSRQVTFSKRRKGLIEKARQL--SI-LCESSIAVVAVS--GSGKLYDS 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
DN+ ++ Y H D L+ LD ++ +N L
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELKALDLAEKIRNYL 91
>gi|226503881|ref|NP_001140301.1| uncharacterized protein LOC100272346 [Zea mays]
gi|194698906|gb|ACF83537.1| unknown [Zea mays]
gi|224033909|gb|ACN36030.1| unknown [Zea mays]
gi|323388689|gb|ADX60149.1| MADS transcription factor [Zea mays]
gi|414585465|tpg|DAA36036.1| TPA: putative MADS-box transcription factor family protein isoform
1 [Zea mays]
gi|414585466|tpg|DAA36037.1| TPA: putative MADS-box transcription factor family protein isoform
2 [Zea mays]
Length = 256
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEL--AI-LCDAQIGVII--FSGSGRMYEY 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+ P A R + + +E QQ ++++M R+K+ + R
Sbjct: 58 SSPPWRIASVFDRYLKAPST------RFEEMDIQQKIVQEMTRMKDERNR 101
>gi|5805230|gb|AAD51897.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++K+A E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKRAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|237701163|gb|ACR16042.1| GLOBOSA-like MADS-box transcription factor [Hypoxis villosa]
Length = 210
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + F ++ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGIMKKAREISV---LCDAKVAVVV--FSSSGKMFDF 57
Query: 68 ----DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ +++ Y +L + +H +L Q+D +KE +M ++R +K
Sbjct: 58 CTPTTTLPGILEKYQQNSGKKLWDAKHENLSAQIDRIKKENDSMQIELRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDD 141
++ LN Q+L+ ++ + +
Sbjct: 113 --INSLNAQDLIPIEEVLSN 130
>gi|414585464|tpg|DAA36035.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 252
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEL--AI-LCDAQIGVII--FSGSGRMYEY 57
Query: 69 NIHP 72
+ P
Sbjct: 58 SSPP 61
>gi|110798209|gb|ABG90944.1| PI2 [Pharus virescens]
Length = 209
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGILKKAREISV---LCDAEVGVVI--FSSAGKLY-D 56
Query: 69 NIHP---LVKAYSHARINE----LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
P L K + N +++H L ++D +KE NM ++R +K
Sbjct: 57 YCSPKTSLSKILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDD 141
++ L ++LL ++ A+D+
Sbjct: 113 ---LNSLQPKDLLMIEEALDN 130
>gi|42794554|gb|AAS45683.1| AGAMOUS-like protein [Thalictrum dioicum]
Length = 226
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V + G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALVVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N ++E M Q+ ++ + L
Sbjct: 60 NSVKKTIERYKKASTDSPNSGSVYEANVQFYQQEASKMRNQIASLQNHNRNLLGESLSNL 119
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N++EL Q++ ++ AK NE
Sbjct: 120 NIRELRQIEKKIEGGISKIRAKKNE 144
>gi|168034578|ref|XP_001769789.1| ppmads2 MIKC* MADS-domain protein PpMADS2 [Physcomitrella patens
subsp. patens]
gi|168034580|ref|XP_001769790.1| MIKC MADS-domain protein PpMADS2 [Physcomitrella patens subsp.
patens]
gi|42602137|gb|AAS21676.1| putative MADS-domain transcription factor [Physcomitrella patens]
gi|162678898|gb|EDQ65351.1| ppmads2 MIKC* MADS-domain protein PpMADS2 [Physcomitrella patens
subsp. patens]
gi|162678899|gb|EDQ65352.1| MIKC MADS-domain protein PpMADS2 [Physcomitrella patens subsp.
patens]
Length = 417
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+I ++ +++ ++E N+ D+L + + + K R+++
Sbjct: 60 CSIEEVIARFANLPMHERNKSFEDMLTRFANNQMHHDRSKYTRKIE 105
>gi|357127014|ref|XP_003565181.1| PREDICTED: MADS-box transcription factor 3-like [Brachypodium
distachyon]
Length = 263
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 37 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRLYEYSN 93
Query: 68 DNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E+N QH ++E + +Q+ ++ +
Sbjct: 94 NSVKATIERYKKANSDTSNSGTVAEVNAQH--------YQQESSKLRQQISSLQNSNRSL 145
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ V + L++L Q++ ++ A+ NE
Sbjct: 146 VKDSVSTMTLRDLKQLEGRLEKGIAKIRARKNE 178
>gi|356557581|ref|XP_003547094.1| PREDICTED: MADS-box protein JOINTLESS-like [Glycine max]
Length = 160
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N + R +TFSKR G++KKA E+ LC + I
Sbjct: 3 RKKIPIKKIDNINARQVTFSKRRKGLFKKAQELS---TLCDAEIALIVFSATGKLFEYAS 59
Query: 57 ----------NRFLGMSQLHNDNIHPLVKAYSHARI---NELNQQHNDLLRQLDEEKEQQ 103
N+ G+ L N +I + + S + E+ + N+ L QL+EE+ Q
Sbjct: 60 SSMQQTLERRNQHSGIQGLDNPSIGQQLGSDSFGMLPLRKEIEDKTNE-LSQLNEEELQG 118
Query: 104 NMLKQMRRVKETQPRWWET---PVDELNLQELLQMDSAV 139
+K+++++++ R W T DE +QE+ + + V
Sbjct: 119 LKIKELQKLEDILQRRWTTISKTKDEKVIQEINHLKTKV 157
>gi|296089427|emb|CBI39246.3| unnamed protein product [Vitis vinifera]
Length = 233
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRVYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI + Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASL 119
Query: 128 NLQELLQMDSAVD 140
++EL Q+++ ++
Sbjct: 120 TVKELKQLENRLE 132
>gi|264223|gb|AAB25101.1| promotes sex organ development [Antirrhinum majus]
gi|288558698|dbj|BAI68391.1| PLENA protein [Antirrhinum majus]
Length = 239
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 16 RGKIEIKRIENITNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRLYEYAN 72
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A + N ++E + +Q+R ++ + + V +
Sbjct: 73 NSVRATIERYKKASADSSNSVSTSEANTQFYQQEANKLRRQIREIQTSNRQMLGEGVSNM 132
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
L++L ++ V+ +K NE
Sbjct: 133 ALKDLKSTEAKVEKAISRIRSKKNE 157
>gi|215260632|gb|ACJ64683.1| MADS-box protein MADS6 [Musa acuminata AAA Group]
Length = 211
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI +I LC+ V + G MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREI--SI-LCEAQVSVVIFSSSGKMSEYCS 59
Query: 68 D--NIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ +++ Y +L + +H L ++D +KE NM ++R +K
Sbjct: 60 PAATLPKILERYQQNSGRKLWDAKHESLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAV 139
++ LN +EL+ ++ A+
Sbjct: 113 LNSLNPKELIPIEDAL 128
>gi|20385590|gb|AAM21345.1|AF373604_1 MADS-box protein 5 [Vitis vinifera]
Length = 223
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRVYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI + Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIKSTIDRYKKASSDSTNGGFTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASL 119
Query: 128 NLQELLQMDSAVD 140
++EL Q+++ ++
Sbjct: 120 TVKELKQLENRLE 132
>gi|124484515|dbj|BAF46354.1| MADS-box transcription factor [Alstroemeria ligtu subsp. ligtu]
Length = 224
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+KKIEN +R +T+SKR +GI KKA+E+ LC V I F +L
Sbjct: 3 RGKIEIKKIENTTNRQVTYSKRRTGIMKKANEL---TVLCDAEVSLIM--FSSTGKLSEY 57
Query: 67 ---NDNIHPLVKAYSH-ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ + +V Y + IN + Q+ + R L+ KE + L+ KE + R E
Sbjct: 58 CSPSTDTKRIVDRYEKVSGINLWSAQYEKMHRTLNHLKEINSNLR-----KEIRNRIGE- 111
Query: 123 PVDELNLQELLQMDSAVDD 141
+D L++ EL ++ +D+
Sbjct: 112 DLDGLDINELRGLEQNLDE 130
>gi|449517949|ref|XP_004166006.1| PREDICTED: agamous-like MADS-box protein AGL11-like isoform 1
[Cucumis sativus]
gi|2997615|gb|AAC08529.1| CUM10 [Cucumis sativus]
Length = 229
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQH 89
++I ++ Y A + ELN Q+
Sbjct: 60 NSIKTTIERYKKACSDSSATSSVTELNTQY 89
>gi|328705517|ref|XP_001944558.2| PREDICTED: serum response factor homolog [Acyrthosiphon pisum]
Length = 364
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ IEN+ R TFSKR +GI KKA E+
Sbjct: 107 GKKTKGRVKIKMEYIENKLRRYTTFSKRKTGIMKKAYEL 145
>gi|6580941|gb|AAF18373.1|AF158540_1 MADS-box transcription factor [Picea abies]
Length = 220
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K IENE +R +TFSKR G++KKA E+ LC+ V I
Sbjct: 3 RGKIEIKMIENESNRKVTFSKRRGGLFKKARELSV---LCEAEVALIV 47
>gi|225460269|ref|XP_002281890.1| PREDICTED: MADS-box protein 5 [Vitis vinifera]
Length = 223
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRVYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI + Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASL 119
Query: 128 NLQELLQMDSAVD 140
++EL Q+++ ++
Sbjct: 120 TVKELKQLENRLE 132
>gi|27804369|gb|AAO22986.1| MADS-box transcription factor CDM86 [Chrysanthemum x morifolium]
Length = 196
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH---N 67
KIE+K+IEN +R +T+SKR +GI KKA EI LC +V + G +
Sbjct: 5 KIEIKRIENTSNRQVTYSKRKNGIIKKAKEI---TVLCDANVSLVIYGSSGKMYEYCSPK 61
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
N+ ++ Y N+L + +H +L ++D +KE ++M ++R +K +
Sbjct: 62 TNLIDMLDRYQRLSGNKLWDAKHENLQNEIDRIKKENESMQIELRHLKGED-------IT 114
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINEK 153
LN +EL+ A +D + L I EK
Sbjct: 115 SLNYEELI----AYEDALENGLTNIREK 138
>gi|6580939|gb|AAF18372.1|AF158539_1 MADS-box transcription factor [Picea abies]
Length = 220
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K IENE +R +TFSKR G++KKA E+ LC+ V I
Sbjct: 3 RGKIEIKMIENESNRKVTFSKRRGGLFKKARELSV---LCEAEVALIV 47
>gi|30689162|ref|NP_850377.1| agamous-like MADS-box protein AGL5 [Arabidopsis thaliana]
gi|117958751|gb|ABK59682.1| At2g42830 [Arabidopsis thaliana]
gi|330255081|gb|AEC10175.1| agamous-like MADS-box protein AGL5 [Arabidopsis thaliana]
Length = 248
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTITEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|30172223|dbj|BAC75971.1| MADS-box transcription factor [Tulipa gesneriana]
Length = 231
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA+E+ LC V I
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRSGIMKKANEL---TVLCDAEVSLI 46
>gi|73915373|gb|AAZ92550.1| MADS-box flowering locus C [Arabidopsis arenosa]
Length = 196
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R ITFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQITFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + + V+
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDIQSKALNYGPHHELLELVESKLVGSNVNN 111
Query: 127 LNLQELLQMD 136
++ L+Q++
Sbjct: 112 VSADTLVQLE 121
>gi|56603620|dbj|BAD80744.1| MADS-box transcription factor [Tradescantia reflexa]
Length = 188
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ SV +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESSVAIV 46
>gi|391358274|gb|AFM43701.1| MADS-box homeotic protein GLO1 [Lilium formosanum]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V + G +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAQVSVVIFSSSGKMSEYCS 59
Query: 69 NIHPLVKAYSHARINELNQ----QHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
L K ++N + +H L ++D +KE NM Q+R +K
Sbjct: 60 PSTSLPKILERCQVNCGKKIWDPKHEHLSAEIDRIKKENDNMQIQLRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+++
Sbjct: 113 LNSLQPKELIPIEEALEN 130
>gi|52548152|gb|AAU82079.1| SHATTERPROOF2 [Arabidopsis thaliana]
Length = 246
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTITEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|27763670|gb|AAO20104.1| mads-box transcription factor [Momordica charantia]
Length = 227
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQH 89
++I + Y A + ELN Q+
Sbjct: 60 NSIKTTIGRYKKACSDSSATSSVTELNTQY 89
>gi|52548134|gb|AAU82070.1| SHATTERPROOF2 [Arabidopsis thaliana]
Length = 246
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTITEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|115487796|ref|NP_001066385.1| Os12g0207000 [Oryza sativa Japonica Group]
gi|91207144|sp|Q2QW53.2|MAD13_ORYSJ RecName: Full=MADS-box transcription factor 13; AltName:
Full=OsMADS13; AltName: Full=RMADS206
gi|33242915|gb|AAQ01161.1| MADS protein [Oryza sativa]
gi|108862314|gb|ABA96136.2| Floral homeotic protein AGAMOUS, putative, expressed [Oryza sativa
Japonica Group]
gi|108862315|gb|ABG21911.1| Floral homeotic protein AGAMOUS, putative, expressed [Oryza sativa
Japonica Group]
gi|108862316|gb|ABG21912.1| Floral homeotic protein AGAMOUS, putative, expressed [Oryza sativa
Japonica Group]
gi|113648892|dbj|BAF29404.1| Os12g0207000 [Oryza sativa Japonica Group]
gi|215687378|dbj|BAG91943.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616798|gb|EEE52930.1| hypothetical protein OsJ_35557 [Oryza sativa Japonica Group]
gi|262093763|gb|ACY26071.1| MADS-box transcription factor 13 [Oryza sativa]
Length = 270
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKET 115
N+N+ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 58 SNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQESAKLRHQIQMLQNT 110
Query: 116 QPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ NE A+
Sbjct: 111 NKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLAS 151
>gi|18406070|ref|NP_565986.1| agamous-like MADS-box protein AGL5 [Arabidopsis thaliana]
gi|113515|sp|P29385.1|AGL5_ARATH RecName: Full=Agamous-like MADS-box protein AGL5; AltName:
Full=Protein SHATTERPROOF 2
gi|166596|gb|AAA32735.1| transcription factor [Arabidopsis thaliana]
gi|20197962|gb|AAD21741.2| floral homeodomain transcription factor (AGL5) [Arabidopsis
thaliana]
gi|52548106|gb|AAU82056.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548108|gb|AAU82057.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548110|gb|AAU82058.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548112|gb|AAU82059.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548114|gb|AAU82060.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548116|gb|AAU82061.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548118|gb|AAU82062.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548120|gb|AAU82063.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548122|gb|AAU82064.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548124|gb|AAU82065.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548126|gb|AAU82066.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548128|gb|AAU82067.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548130|gb|AAU82068.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548132|gb|AAU82069.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548136|gb|AAU82071.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548138|gb|AAU82072.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548140|gb|AAU82073.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548142|gb|AAU82074.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548144|gb|AAU82075.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548146|gb|AAU82076.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548148|gb|AAU82077.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|52548150|gb|AAU82078.1| SHATTERPROOF2 [Arabidopsis thaliana]
gi|330255080|gb|AEC10174.1| agamous-like MADS-box protein AGL5 [Arabidopsis thaliana]
Length = 246
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTITEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|168020151|ref|XP_001762607.1| MIKC MADS-domain protein PPMA9 [Physcomitrella patens subsp.
patens]
gi|162686340|gb|EDQ72730.1| MIKC MADS-domain protein PPMA9 [Physcomitrella patens subsp.
patens]
Length = 411
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEDVIGRFANLPMHERNKSFEDML 85
>gi|315418858|gb|ADU15476.1| AG [Actinidia arguta]
Length = 239
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
KK R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G +
Sbjct: 9 KKMGGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRL 65
Query: 63 SQLHNDNIHPLVKAYSHA--------RINELNQQ 88
+ N+++ ++ Y A ++ELN Q
Sbjct: 66 YEYANNSVKGTIERYKKASSGSSNTGSVSELNAQ 99
>gi|392522060|gb|AFM77900.1| MADS-box protein AGL24 [Brassica napus]
Length = 221
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 36/167 (21%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N R +TFSKR GI KKA+E+ LC V I
Sbjct: 3 REKIRIKKIDNLTARQVTFSKRRRGIIKKANELS---ILCDADVALIIFSATGKLFEFSS 59
Query: 57 ---NRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
LG LH NI+ ++ S +Q N L +L +E E + KQ+R+++
Sbjct: 60 SSMRDILGRYNLHASNINKMMGPPSP-----YHQLENCNLSRLSKEVEDKT--KQLRQMR 112
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
++ LNL+EL +++ ++ ++ L++++EK S
Sbjct: 113 GGD-------LEGLNLEELQRLEKSL----ESGLSRVSEKKGECVMS 148
>gi|33342032|dbj|BAC80250.1| MADS-box transcription factor [Houttuynia cordata]
Length = 218
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN+ +R +TFSKR +G++KKA E+ LC + I F +LH
Sbjct: 3 RGKIEIKRIENDTNRQVTFSKRKNGLFKKADELTV---LCDAQISIIM--FSSTDKLH 55
>gi|326521456|dbj|BAK00304.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K++E+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRVESAAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKTDQPTLDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
++ L++ EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EELEGLSVDELQQLEKNLETGLHKVLQTKDQQFLEQINE 151
>gi|298112168|gb|ADI58461.1| GLOBOSA [Cymbidium goeringii]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLG 52
>gi|414869623|tpg|DAA48180.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 337
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KK +E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRQMGLFKKENEV--AI-LCDAQIGVIV--FSGSGRMYEY 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR-------WWE 121
+ P A R + + +E QQ ++++M R+K+ + R +
Sbjct: 58 SSPPWRIASVFDRYLKAPST------RFEEMDIQQKIVQEMTRMKDERNRLRMIMAQYMA 111
Query: 122 TPVDELNLQELLQMDSAVD-DLHQTFLAKINEKTAAAAASSSVAPP 166
+ + Q+L ++ ++ L++ L KI E+ S+ PP
Sbjct: 112 EDLASFSAQDLSNLEQQIEFSLYKVRLRKIKERI-------SLLPP 150
>gi|399950149|gb|AFP65759.1| TM3-like protein 2 [Iris fulva]
Length = 238
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGM-SQLHN 67
R K +MK+IENE R +TFSKR SG+ KKA E+ LC V I G S+ +
Sbjct: 3 RGKTQMKRIENETSRQVTFSKRRSGLLKKALELSV---LCDAEVGLIVFSPRGKPSEFSS 59
Query: 68 DNIHPLVKAY-SHARINELNQQHND 91
++ ++ Y SHA+ E+N +H +
Sbjct: 60 SSMQRTIERYKSHAK--EMNFKHRE 82
>gi|237701191|gb|ACR16056.1| DEFICIENS-like MADS-box transcription factor [Vanilla planifolia]
Length = 224
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+KKIEN +R +T+SKR +GI KKASE+ LC + I G +
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASELSV---LCDAELSLIMFSSTGKFSEYCS 59
Query: 67 -NDNIHPLVKAYSH-ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
+ + + Y H + I+ + Q+ + L+ KE + L+ KE + R E +
Sbjct: 60 PSTDTKSVYDRYQHVSGIDLWSAQYEKMQNTLNHLKEINHNLR-----KEIRQRMGE-DL 113
Query: 125 DELNLQELLQMDSAVDD 141
D L+++EL ++ +DD
Sbjct: 114 DGLDIKELRGLEQNMDD 130
>gi|125538211|gb|EAY84606.1| hypothetical protein OsI_05974 [Oryza sativa Indica Group]
Length = 230
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 22/68 (32%)
Query: 12 IEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------QPSV 52
IEMK IEN++ R + FSKR G++KKASE+ LC PSV
Sbjct: 27 IEMKLIENKEARQVCFSKRREGVFKKASELSV---LCGARVAVVFFSPAGRPHCFGHPSV 83
Query: 53 KAIANRFL 60
A+A+RFL
Sbjct: 84 PAVADRFL 91
>gi|321171300|gb|ADW76860.1| PI/GLO [Cymbidium faberi]
gi|384096582|gb|AFH66786.1| PI-like MADS-box 2 protein [Cymbidium ensifolium]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLG 52
>gi|357160520|ref|XP_003578791.1| PREDICTED: MADS-box transcription factor 13-like [Brachypodium
distachyon]
Length = 251
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 60 NSVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQEAAKLRHQIQMLQNTNKH 112
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ NE A
Sbjct: 113 LVGDSVGNLSLKELKQLESRLEKGIAKIRARKNELLAG 150
>gi|354683068|gb|AER30448.1| AGAMOUS4 [Passiflora edulis]
Length = 255
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
++T R K+E+K+IEN +R +TFSKR +G+ KKA +E LC V I G +
Sbjct: 26 QRTLGRGKVEIKRIENTTNRQVTFSKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRL 82
Query: 63 SQLHNDNIHPLVKAYSHA 80
+ N ++ ++ Y A
Sbjct: 83 YEYSNSSVKSTIERYKKA 100
>gi|161158798|emb|CAM59057.1| MIKC-type MADS-box transcription factor WM13 [Triticum aestivum]
Length = 229
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSTGTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 112 DLDALEFEELRDLEQNVD 129
>gi|154243317|gb|ABS71831.1| MADS box transcription factor [Populus deltoides]
Length = 211
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + F ++H +
Sbjct: 3 RGKIEIKRIENASNRQVTYSKRKNGIIKKAKEI---TVLCDAQVSLVI--FASSGRMH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
P S ++ L++ H ++L + K +N+ K++ R+K+ E ++
Sbjct: 57 YCSP-----STTVVDLLDKYHKQSGKRLWDAK-HENLSKEIDRIKK------ENDSMQIE 104
Query: 129 LQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
L+ L D + LH T L I E A A+
Sbjct: 105 LRHLKGED--ISSLHHTELMAIEEALDAGLAA 134
>gi|95981862|gb|ABF57916.1| MADS-box transcription factor TaAGL11 [Triticum aestivum]
Length = 228
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+ + ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSTNEIIDKYSTHSKNLGKTDQPALDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
++ L++ EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EELEGLSVDELQQLEKNLETGLHRVLQTKDQQFLEQINE 151
>gi|5805436|gb|AAD51997.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLAKKAKEITV---LCDAKVALI 46
>gi|356530117|ref|XP_003533630.1| PREDICTED: MADS-box transcription factor 6-like [Glycine max]
Length = 155
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+K+IEN+ +R +TFSKR +G+ KKA E+ LC V + G D
Sbjct: 3 RGRVELKRIENKINRQVTFSKRKTGLLKKAKEL---SVLCDAEVALVIFSPRGKLFTFPD 59
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDELN 128
+ ++K Y R NQ N L +E + ++ V++TQ R + L+
Sbjct: 60 DAQSIIKTYDRYR-KYSNQDGNVELENQGWYQEMSKLNEKYEAVQKTQRRLHGEDLGPLS 118
Query: 129 LQEL 132
++EL
Sbjct: 119 IKEL 122
>gi|54042999|gb|AAV28490.1| MADS box PI-like protein 10 [Phalaenopsis hybrid cultivar]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLG 52
>gi|6970411|dbj|BAA90743.1| MADS-box protein [Rosa rugosa]
Length = 249
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 23 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 79
Query: 68 DNIHPLVKAYSHA-------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+++ ++ Y A + E N Q ++E + +Q+R ++ +
Sbjct: 80 NSVRATIERYKKACDSSNTGSVTETNVQF--------YQQEASKLRRQIREIQNSNRHIL 131
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ LN++EL ++ ++ +K NE
Sbjct: 132 GEALSTLNVKELKNLEGRLEKGISRIRSKKNE 163
>gi|356498661|ref|XP_003518168.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Glycine max]
Length = 154
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 33/131 (25%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWE------AIHLCQPSVKAIAN 57
KKTK +QKIEMKK+ NE +TFSKR I+KKASE+ A+ L P +
Sbjct: 14 KKTKGQQKIEMKKVNNERYLQVTFSKRRIEIFKKASELAPLYSVDLAVILFSP-----CS 68
Query: 58 RFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQP 117
RF + D+ + R + + +L+ RV E
Sbjct: 69 RFFSFGSPNMDSF---------------------IQRYMMQAPSPTLILQHHGRVAEDH- 106
Query: 118 RWWETPVDELN 128
WW P++ +N
Sbjct: 107 FWWAIPIESIN 117
>gi|44888599|gb|AAS48126.1| APETALA3-like protein [Hordeum vulgare subsp. vulgare]
gi|326527307|dbj|BAK04595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSTGTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 112 DLDALEFEELRGLEQNVD 129
>gi|237861733|gb|ACR24457.1| MADS2 [Cymbidium hybrid cultivar]
Length = 228
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPST 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K I R+ GM L N + H +NE+NQ +RQ E+ + +K
Sbjct: 63 DIKGIYERYQVVTGMD-LWNAQYERMQNTLKH--LNEINQNLRKEIRQRKGEELEGMDIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|110736687|dbj|BAF00307.1| hypothetical protein [Arabidopsis thaliana]
Length = 153
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIEMKKIEN R +TFSKR +G+ KKA +E LC + I G + + +
Sbjct: 3 RGKIEMKKIENATSRQVTFSKRRNGLLKKA---YELSVLCDAQLSLIIFSQRGRLYEFSS 59
Query: 68 DNIHPLVKAY-----SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
++ ++ Y H N +Q H L+Q E +M+ ++ ++ + +
Sbjct: 60 SDMQKTIERYRKYTKDHETSNHDSQIHLQQLKQ-----EASHMITKIELLEFHKRKLLGQ 114
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ +L+EL ++DS + Q L K+ E+
Sbjct: 115 GIASCSLEELQEIDSQL----QRSLGKVRER 141
>gi|288973131|gb|ADC79699.1| AGAMOUS-like protein [Euptelea pleiosperma]
Length = 225
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELN 86
+++ ++ Y A N N
Sbjct: 60 NSVKTTIERYKKACANSSN 78
>gi|189099169|gb|ACD76826.1| SHATTERPROOF1a-like protein [Capsella bursa-pastoris]
Length = 250
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+ KK R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G
Sbjct: 12 SSKKIVGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRG 68
Query: 62 -MSQLHNDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ + N+++ ++ Y A + E N Q+ ++E + +Q+R +
Sbjct: 69 RLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDI 120
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ + LN +EL ++ ++ +K NE A
Sbjct: 121 QNLNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNEMLVA 164
>gi|312600938|gb|ADQ92355.1| MADS-box transcription factor [Brachypodium distachyon]
Length = 253
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 60 NSVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQEAAKLRHQIQMLQNTNKH 112
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ NE A
Sbjct: 113 LVGDSVGNLSLKELKQLESRLEKGIAKIRARKNELLAG 150
>gi|343408984|gb|AEM06931.1| flowering locus C protein [Arabidopsis thaliana]
gi|407914522|gb|AFU51422.1| FLC [Arabidopsis thaliana]
Length = 196
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+++K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLDIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRYG--------KQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|160333572|ref|NP_001103996.1| serum response factor [Danio rerio]
Length = 539
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWE------------------- 43
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 116 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 175
Query: 44 -AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEE--- 99
A QP + + + L + L++ + P + R++ + DL Q+ E
Sbjct: 176 FATRKLQPMITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGL 235
Query: 100 KEQQNMLK 107
E + MLK
Sbjct: 236 TEPKEMLK 243
>gi|190443738|gb|ABJ96361.2| dam1 [Prunus persica]
Length = 242
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+KI++KKI+N R +TFSKR GI+KKA+E+ LC+ V + F +L +
Sbjct: 5 REKIKIKKIDNLPARQVTFSKRRRGIFKKAAELS---VLCESEVAVVI--FSATGKLFD- 58
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDE-----EKEQQNMLKQMRRVKETQPRWWETP 123
+ S + E Q+H + + DE + E++N ++ + ++E + +
Sbjct: 59 -----YSSSSMKDVIERYQEHINGAEKFDEPSIELQPEKENHIRLSKELEEKSRQLRQMK 113
Query: 124 ---VDELNLQELLQMDSAVD 140
++ELN EL +++ VD
Sbjct: 114 GEDLEELNFDELQKLEQLVD 133
>gi|29791546|gb|AAH50480.1| Srf protein [Danio rerio]
gi|197247211|gb|AAI65611.1| Srf protein [Danio rerio]
Length = 520
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWE------------------- 43
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 97 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 156
Query: 44 -AIHLCQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEE--- 99
A QP + + + L + L++ + P + R++ + DL Q+ E
Sbjct: 157 FATRKLQPMITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGL 216
Query: 100 KEQQNMLK 107
E + MLK
Sbjct: 217 TEPKEMLK 224
>gi|3688593|dbj|BAA33459.1| MADS box transcription factor [Triticum aestivum]
Length = 229
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR SGI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRSGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSTGTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 112 DLDALEFEELRDLEQNVD 129
>gi|392522056|gb|AFM77898.1| MADS-box protein AGL24 [Brassica napus]
gi|392522066|gb|AFM77903.1| MADS-box protein AGL24 [Brassica juncea]
Length = 221
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 36/167 (21%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N R +TFSKR GI KKA+E+ LC V I
Sbjct: 3 REKIRIKKIDNLTARQVTFSKRRRGIIKKANELS---ILCDADVALIIFSATGKLFEFSS 59
Query: 57 ---NRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
LG LH NI+ ++ S +Q N L +L +E E + KQ+R+++
Sbjct: 60 SSMRDILGRYNLHASNINKMMGPPSP-----YHQLDNCNLSRLSKEVEDKT--KQLRQMR 112
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
++ LNL+EL +++ ++ ++ L++++EK S
Sbjct: 113 GGD-------LEGLNLEELQRLEKSL----ESGLSRVSEKKGECVMS 148
>gi|116268411|gb|ABJ96368.1| dam1 [Prunus persica]
Length = 207
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R+KI++KKI+N R +TFSKR GI+KKA+E+ LC+ V + F +L +
Sbjct: 5 REKIKIKKIDNLPARQVTFSKRRRGIFKKAAELS---VLCESEVAVVI--FSATGKLFD- 58
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDE-----EKEQQNMLKQMRRVKETQPRWWETP 123
+ S + E Q+H + + DE + E++N ++ + ++E + +
Sbjct: 59 -----YSSSSMKDVIERYQEHINGAEKFDEPSIELQPEKENHIRLSKELEEKSRQLRQMK 113
Query: 124 ---VDELNLQELLQMDSAVD 140
++ELN EL +++ VD
Sbjct: 114 GEDLEELNFDELQKLEQLVD 133
>gi|126428411|gb|ABO13926.1| APETALA3-like protein [Papaver somniferum]
Length = 244
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR SGI+KKA E+ LC V I G +
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRSGIFKKAKEL---TILCDAQVCLIMFSNTGKVCEYVS 59
Query: 69 NIHPLVKAYSHAR----INELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
+ + + R I+ Q+ L +L ++K+ + LK KE + R + +
Sbjct: 60 PSTTMKEFFDRFRRVTNIDLWASQYETLQEELKKQKQINSRLK-----KEIRQRTGQDDL 114
Query: 125 DELNLQELLQMDS 137
+EL +EL +++
Sbjct: 115 NELTFEELRSLEA 127
>gi|42794572|gb|AAS45692.1| AGAMOUS-like protein [Nymphaea sp. EMK-2003]
Length = 224
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y S + E N Q+ + E + +Q+ ++++ +
Sbjct: 60 NSVRGTIERYKKAYAESSSSGAVAETNAQYY--------QHEAHKLRQQISKIQQDNRQM 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
V E++L++L +++ ++
Sbjct: 112 LGEGVSEMSLRDLKSLENKLE 132
>gi|6470126|gb|AAF13594.1|AF151693_1 transcription factor [Oryza sativa]
Length = 270
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKET 115
N+N+ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 58 SNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQESAKLRHQIQMLQNT 110
Query: 116 QPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ NE A+
Sbjct: 111 NKHLVGDNVSNLSLKELKQLESRLEKGIAKIRARKNELLAS 151
>gi|2961437|gb|AAC05723.1| MADS box protein [Oryza sativa]
Length = 210
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREIGV---LCDREVGVV 46
>gi|392522062|gb|AFM77901.1| MADS-box protein AGL24 [Brassica napus]
Length = 221
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 36/167 (21%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N R +TFSKR GI KKA+E+ LC V I
Sbjct: 3 REKIRIKKIDNLTARQVTFSKRRRGIIKKANELS---ILCDADVALIIFSATGKLFEFSS 59
Query: 57 ---NRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
LG LH NI+ ++ S +Q N L +L +E E + KQ+R+++
Sbjct: 60 SSMRDILGRYNLHASNINKMMGPPSP-----YHQLDNCNLSRLSKEVEDKT--KQLRQMR 112
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
++ LNL+EL +++ ++ ++ L++++EK S
Sbjct: 113 GGD-------LEGLNLEELQRLEKSL----ESGLSRVSEKKGECVMS 148
>gi|356501483|ref|XP_003519554.1| PREDICTED: agamous-like MADS-box protein AGL5-like [Glycine max]
Length = 246
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
KKT R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G +
Sbjct: 17 KKTGR-GKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRL 72
Query: 63 SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ N+++ ++ Y A N + ++E + +Q+R ++
Sbjct: 73 YEYANNSVRGTIERYKKACAASTNAESVSEANTQFYQQEASKLKRQIRDIQNLNRHILGE 132
Query: 123 PVDELNLQELLQMDSAVDDL--------HQTFLAKI 150
+ L+L+EL ++S ++ H+T A I
Sbjct: 133 GLSSLSLKELKNLESRLEKGLSRVRSRKHETLFADI 168
>gi|307213219|gb|EFN88714.1| Serum response factor-like protein [Harpegnathos saltator]
Length = 261
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 28 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 66
>gi|307000606|gb|ADN22973.1| mads-box transcription factor [Siraitia grosvenorii]
Length = 227
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQH 89
++I + Y A + ELN Q+
Sbjct: 60 NSIKTTIDRYKKACSDSSATSSVTELNTQY 89
>gi|190183777|dbj|BAG48502.1| B-class MADS-box transcription factor [Cryptomeria japonica]
Length = 193
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KI+MK IEN+ R +TFSKR G++KKA+E+ LC V AI
Sbjct: 3 RGKIQMKAIENQISRQVTFSKRRKGLFKKANELS---VLCDAQVAAIV 47
>gi|41387778|gb|AAS01765.1| MADS-box protein 1 [Eustoma exaltatum subsp. russellianum]
Length = 218
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KI++K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIDIKRIENNTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIIFSSRGRVYEYAN 59
Query: 68 DNIHPLV----KAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+NI + KA S A Q+ N Q + +K +Q Q++ ++ +
Sbjct: 60 NNIKSTIDRYRKATSDASTVFTTQEINAQFYQQESKKLRQ----QIQVLQNSNRHLMGEG 115
Query: 124 VDELNLQELLQMDSAVD 140
+ LN++EL Q++S ++
Sbjct: 116 LSSLNVKELKQLESRLE 132
>gi|219885019|gb|ACL52884.1| unknown [Zea mays]
Length = 212
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDAEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK---- 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLKGEDL 113
Query: 114 -ETQPR 118
QPR
Sbjct: 114 NSLQPR 119
>gi|11494137|gb|AAG35773.1|AF209729_1 putative MADS box transcription factor [Hemerocallis hybrid
cultivar]
Length = 221
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRSGIMKKAKEL---TVLCDADVSII 46
>gi|54043001|gb|AAV28491.1| MADS box PI-like protein 15 [Phalaenopsis hybrid cultivar]
Length = 217
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + LG
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAKEISV---LCDAQVSLVIFSSLG 52
>gi|30172225|dbj|BAC75972.1| MADS-box transcription factor [Tulipa gesneriana]
Length = 211
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + G MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCDAWVSVVIFSSSGKMSEYCS 59
Query: 68 DNIH--PLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
I ++ Y N+L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PTITLPKMLDKYQQNCGNKLWDAKHQNLSEEIDRIKKENDNMQIELRHLK 109
>gi|356553559|ref|XP_003545122.1| PREDICTED: agamous-like MADS-box protein AGL5-like [Glycine max]
Length = 256
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+K R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G
Sbjct: 12 CSQKKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRG 68
Query: 62 -MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+ + N+++ + Y A N + ++E + +Q+R ++
Sbjct: 69 RLYEYANNSVRGTIDRYKKACAASTNPESVSEANTQFYQQEASKLKRQIRDIQNLNRHIL 128
Query: 121 ETPVDELNLQELLQMDSAVDDL--------HQTFLAKI 150
+ L+L+EL ++S ++ H+T A I
Sbjct: 129 GEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADI 166
>gi|51773782|dbj|BAD38888.1| MADS box transcription factor [Gentiana triflora]
Length = 252
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN+ +R +TF KR SG+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENKTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALIVFSSSGRLYEYAN 74
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
++ ++ Y S ++E N Q ++E + K +R ++ +
Sbjct: 75 NSAKGTIERYKKACGDSTSAGSVSEANIQF--------YQQEANQLRKNIRDIQSSNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+DEL+ +++ ++ V+ ++ NE AA
Sbjct: 127 LGEGLDELSFKQIKNLEGRVEKGIARVRSRKNELLAA 163
>gi|6521960|emb|CAB62047.1| Serum Response Factor [Artemia franciscana]
Length = 317
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 109 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 147
>gi|195643668|gb|ACG41302.1| MADS-box transcription factor 31 [Zea mays]
Length = 256
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRRMGLFKKANEL--AI-LCDVQIGVII--FSGSGRMYEY 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+ P A R + + +E QQ ++++M R+K+ + R
Sbjct: 58 SSPPWRIASVFDRYLKAPST------RFEEMDIQQKIVQEMTRMKDERNR 101
>gi|4218169|emb|CAA08802.1| MADs-box protein, GDEF1 [Gerbera hybrid cultivar]
Length = 226
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENNTNRQVTYSKRRNGIFKKAHELTV---LCDAKVSLI 46
>gi|242064162|ref|XP_002453370.1| hypothetical protein SORBIDRAFT_04g004736 [Sorghum bicolor]
gi|241933201|gb|EES06346.1| hypothetical protein SORBIDRAFT_04g004736 [Sorghum bicolor]
Length = 258
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR G+ KKA+E+ A+ LC V + G M + +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGLLKKANEL--AV-LCDARVGVVIFSSTGKMFEYCS 59
Query: 68 D--NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
++ L++ Y HA N + ++D Q +L +M R+K
Sbjct: 60 PACSLRELIEQYQHATNNHFEEINHD-----------QQILLEMTRMK 96
>gi|224067826|ref|XP_002302552.1| MIKC mads-box transcription factor SOC1 [Populus trichocarpa]
gi|222844278|gb|EEE81825.1| MIKC mads-box transcription factor SOC1 [Populus trichocarpa]
Length = 221
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +M++IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMRRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVAVIVFSPRGKLYEFGS 59
Query: 68 DNIHPLVKAYS-HARINELNQQHNDL-LRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y H + + N+Q ++L + QL + E +M+K++ ++ ++ + +
Sbjct: 60 SSVQETIERYQRHVKESNTNKQTSELNMEQL--KGEAASMIKKIEILEVSKRKLLGECLG 117
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
++EL Q++ ++ T A+ N+
Sbjct: 118 SCTVEELQQIEQQLERSVSTIRARKNQ 144
>gi|418203678|dbj|BAM66585.1| FLOWERING LOCUS C, partial [Brassica rapa subsp. pekinensis]
Length = 193
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ L+ + + + ++ + E+ V
Sbjct: 60 GDNLVRILDRY--------GKQHADDLKALNLQSKALSYGSHNELLELVDSKLVESNVGG 111
Query: 127 LNLQELLQMDSAVDD 141
+++ L+Q++ +++
Sbjct: 112 VSVDTLVQLEGVLEN 126
>gi|162463623|ref|NP_001105137.1| MADS29 [Zea mays]
gi|13274182|emb|CAC33850.1| putative MADS-domain transcription factor [Zea mays]
Length = 212
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDAEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK---- 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLKGEDL 113
Query: 114 -ETQPR 118
QPR
Sbjct: 114 NSLQPR 119
>gi|284178648|gb|ADB81906.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 441
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIVFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEDVISRFANLPMHERNKSFEDML 85
>gi|190183781|dbj|BAG48504.1| B-class MADS-box transcription factor [Cryptomeria japonica]
Length = 206
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IE+ +R +TFSKR SG++KKA EI +I LC V I
Sbjct: 3 RGKIEIKRIESTTNRQVTFSKRRSGLFKKAKEI--SI-LCASDVAVIV 47
>gi|161158838|emb|CAM59077.1| MIKC-type MADS-box transcription factor WM29B [Triticum aestivum]
Length = 276
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
+AG + R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I
Sbjct: 32 VAGSEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSR 88
Query: 61 G-MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
G + + N+++ ++ Y A + E+N Q+ ++E + +Q+
Sbjct: 89 GRLYEYSNNSVKATIERYKKANSDTSNSGTVAEVNAQY--------YQQESSKLRQQISS 140
Query: 112 VKETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ + R V + L++L Q++ ++ A+ NE
Sbjct: 141 LQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNE 182
>gi|195626534|gb|ACG35097.1| MADS-box transcription factor 4 [Zea mays]
Length = 212
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDAEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK---- 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLKGEDL 113
Query: 114 -ETQPR 118
QPR
Sbjct: 114 NSLQPR 119
>gi|15667638|gb|AAL05440.1|AF097746_1 putative MADS-box family transcription factor [Cryptomeria
japonica]
Length = 206
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IE+ +R +TFSKR SG++KKA EI +I LC V I G + +
Sbjct: 3 RGKIEIKRIESTTNRQVTFSKRRSGLFKKAKEI--SI-LCASDVAVIVFNSTGRLFDFAS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQL-DEEKEQQNMLKQMRRV 112
++ +++ Y +A + N ++ +L Q + +KE + + K++ V
Sbjct: 60 SSMKRILERYRNASGRGVWNNEYEQMLSQFRNLKKENEELQKELSCV 106
>gi|357967099|gb|AET97614.1| transparent TESTA16 protein [Brassica napus]
Length = 238
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN R +TFSKR SG+ KKA E+ LC + I F +L+
Sbjct: 3 RGKIEIKKIENRTARQVTFSKRRSGVIKKAHELSV---LCDAHIGLIV--FSATGKLYQH 57
Query: 69 NIHPLV 74
PL
Sbjct: 58 CTEPLT 63
>gi|50082561|gb|AAT69985.1| PISTILLATA [Spinacia oleracea]
Length = 203
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA+EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIIKKATEINV---LCDSMVSVVI--FANNGKMHAY 57
Query: 69 N-----IHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N + +++ Y + L + +H +L ++D +KE +M ++R + +
Sbjct: 58 NSPSTPVEDILEKYQNISGKRLWDAKHEELKNEIDRIKKENDDMRVELRHLNGEDIASLQ 117
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
P D L++ L + A ++ Q + K++EK
Sbjct: 118 YP-DLSRLEQALDIGIARNNDRQMEIYKMHEKNTT 151
>gi|392522058|gb|AFM77899.1| MADS-box protein AGL24 [Brassica napus]
Length = 221
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 36/167 (21%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA------------ 56
R+KI +KKI+N R +TFSKR GI KKA+E+ LC V I
Sbjct: 3 REKIRIKKIDNLTARQVTFSKRRRGIIKKANELS---ILCDADVALIIFSATGKLFEFSS 59
Query: 57 ---NRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
LG LH NI+ ++ S +Q N L +L +E E + KQ+R+++
Sbjct: 60 SSMRDILGRYNLHASNINKMMGPPSP-----YHQLENCNLSRLSKEVEDKT--KQLRQMR 112
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
++ LNL+EL +++ ++ ++ L++++EK S
Sbjct: 113 GED-------LEGLNLEELQRLEKSL----ESGLSRVSEKKGECVMS 148
>gi|224084990|ref|XP_002307460.1| predicted protein [Populus trichocarpa]
gi|222856909|gb|EEE94456.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + F ++H
Sbjct: 3 RGKIEIKRIENASNRQVTYSKRKNGIIKKAKEI---TVLCDAQVSLVI--FASSGRMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ + L+ Y L + +H +L +++D +KE +M ++R +K
Sbjct: 58 CSPSTTVVDLLDKYQKQSGKRLWDAKHENLSKEIDRIKKENDSMQIELRHLK-------G 110
Query: 122 TPVDELNLQELLQMDSAVD 140
+ L+ EL+ ++ A+D
Sbjct: 111 EDISSLHHTELMAIEEALD 129
>gi|145617253|gb|ABP88099.1| FLC3 [Brassica rapa subsp. chinensis]
Length = 197
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYS--HAR-INELNQQ--------HNDLLRQLDEEKEQQNM 105
DN+ ++ Y HA + LN Q HN+LL +D + + N+
Sbjct: 60 GDNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNV 109
>gi|413949240|gb|AFW81889.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 212
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 25/126 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDAEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK---- 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLKGEDL 113
Query: 114 -ETQPR 118
QPR
Sbjct: 114 NSLQPR 119
>gi|168059771|ref|XP_001781874.1| MIKC MADS-domain protein PPM7 [Physcomitrella patens subsp.
patens]
gi|66840961|emb|CAI39205.1| putative MADS-domain transcription factor [Physcomitrella patens]
gi|162666681|gb|EDQ53329.1| MIKC MADS-domain protein PPM7 [Physcomitrella patens subsp.
patens]
Length = 438
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIVFSPSGKLTQYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEDVISRFANLPMHERNKSFEDML 85
>gi|454265|emb|CAA50549.1| FBP3 [Petunia x hybrida]
Length = 212
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITV---LCDAKVSLII--FGNSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ + ++ Y L + +H +L ++D +KE +M ++R +K
Sbjct: 58 CSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDSMQVKLRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ LN +EL+ ++ + + + AK +E
Sbjct: 113 --INSLNHKELMVLEEGLTNGLSSISAKQSE 141
>gi|449459612|ref|XP_004147540.1| PREDICTED: MADS-box protein SVP-like [Cucumis sativus]
Length = 235
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
RQKIE+KKI+N R +TFSKR G++KKA E+ LC + I F +L +
Sbjct: 3 RQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELA---TLCDADIALIV--FSASGKLFD- 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL--LRQLDEEKEQQNMLKQMRRVKETQPRWWETP--- 123
YS + + +L ++HN L L + + Q +L++ K T+ +T
Sbjct: 57 --------YSSSSMLDLLRRHNMLPELNSISQPPSQVQLLEKSAHAKLTEEFAAKTKELR 108
Query: 124 ------VDELNLQELLQMDSAVDD 141
+ EL ++EL Q++ +++
Sbjct: 109 HMKGEELQELGIEELKQLEKLLEN 132
>gi|221468615|ref|NP_001137751.1| blistered, isoform B [Drosophila melanogaster]
gi|220902372|gb|ACL83204.1| blistered, isoform B [Drosophila melanogaster]
Length = 355
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|75282078|sp|Q40704.1|MADS3_ORYSJ RecName: Full=MADS-box transcription factor 3; AltName:
Full=OsMADS3; AltName: Full=Protein AGAMOUS-like;
AltName: Full=RMADS222
gi|886405|gb|AAA99964.1| MADS box protein [Oryza sativa]
Length = 236
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHAR--------INELNQQH 89
+++ V+ Y A + E+N QH
Sbjct: 60 NSVKSTVERYKKANSDTSNSGTVAEVNAQH 89
>gi|51849639|dbj|BAD42351.1| PISTILLATA-like protein [Cabomba caroliniana]
Length = 214
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +TFSKR GI KKA EI LC V I
Sbjct: 3 RGKIEIKKIENASNRQVTFSKRKQGILKKAKEISV---LCDAKVSLI 46
>gi|357126209|ref|XP_003564781.1| PREDICTED: MADS-box transcription factor 2-like [Brachypodium
distachyon]
Length = 209
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR GI KKA EI LC V + G
Sbjct: 3 RGKIEIKRIENPANRQVTFSKRRHGILKKAKEISV---LCDAEVGVVIFSSAGKLYEFCS 59
Query: 69 NIHPLVKAYSHARINE----LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ L + +IN +++H L ++D +KE NM ++R +K
Sbjct: 60 SKTSLSRILEKYQINSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 LNSLQPKELIMIEEALDN 130
>gi|344234791|gb|EGV66659.1| hypothetical protein CANTEDRAFT_129032 [Candida tenuis ATCC
10573]
gi|344234792|gb|EGV66660.1| SRF-TF-domain-containing protein [Candida tenuis ATCC 10573]
Length = 232
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK+ K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 41 GGKQQKERRKIEIKFIQDKSRRHITFSKRKAGIMKKAYEL 80
>gi|226897249|dbj|BAH56656.1| MADS-box transcription factor [Triticum aestivum]
Length = 273
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
AG + R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I G
Sbjct: 33 AGSEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRG 89
Query: 62 -MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ + N+++ ++ Y A + E+N Q+ ++E + +Q+ +
Sbjct: 90 RLYEYSNNSVKATIERYKKANSDTSNSGTVAEVNAQY--------YQQESSKLRQQISSL 141
Query: 113 KETQPR-WWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + R V + L++L Q++ ++ A+ NE
Sbjct: 142 QNSNSRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNE 182
>gi|63146618|gb|AAY34137.1| flowering locus C [Eutrema halophilum]
Length = 197
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + + ++ + + ++ VD
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDLQSKALSYGSHHELLELVESQLVDSSVDN 111
Query: 127 LNLQELLQMD 136
++ L Q++
Sbjct: 112 ASVDSLAQLE 121
>gi|56603624|dbj|BAD80746.1| MADS-box transcription factor [Commelina communis]
Length = 210
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ +V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAAVSVV 46
>gi|392522054|gb|AFM77897.1| MADS-box protein AGL24 [Brassica napus]
Length = 221
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 38/161 (23%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI------------A 56
R+KI +KKI+N R +TFSKR GI+KKA E+ LC V I +
Sbjct: 3 REKIRIKKIDNITARQVTFSKRRRGIFKKADELS---VLCDADVALIIFSATGKLFEFSS 59
Query: 57 NR---FLGMSQLHNDNIHPLVKAYS-HARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+R LG LH NI ++ S + ++ + N L +L +E E + KQ+R++
Sbjct: 60 SRMRDILGRYNLHASNIDRVMGQPSPYHQVEDCN------LSRLSQEVEDKT--KQLRKL 111
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ ++ LNL+EL +++ L ++ L++++EK
Sbjct: 112 RGED-------LEGLNLEELQRLEK----LLESGLSRVSEK 141
>gi|262093761|gb|ACY26070.1| MADS-box transcription factor 3 [Oryza sativa]
Length = 235
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHAR--------INELNQQH 89
+++ V+ Y A + E+N QH
Sbjct: 60 NSVKSTVERYKKANSDTSNSGTVAEVNAQH 89
>gi|17933454|gb|AAK70217.1| MADS-box protein [Brassica napus]
gi|30523362|gb|AAP31679.1| flowering locus C [Brassica rapa]
gi|113015846|gb|ABI30001.1| flowering locus C3 [Brassica rapa subsp. pekinensis]
gi|408369188|gb|AFU61567.1| flowering locus C [Brassica napus]
gi|408369205|gb|AFU61575.1| flowering locus C [Brassica napus]
Length = 197
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ L+ + + + ++ + E+ V
Sbjct: 60 GDNLVRILDRY--------GKQHADDLKALNLQSKALSYGSHNELLELVDSKLVESNVGG 111
Query: 127 LNLQELLQMDSAVDD 141
+++ L+Q++ +++
Sbjct: 112 VSVDTLVQLEGVLEN 126
>gi|7672991|gb|AAF66690.1|AF144623_1 MADS-box transcription factor [Canavalia lineata]
Length = 222
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 20/149 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
RQKI++KKI+N R +TFSKR GI+KKA E+ LC V I G + + +
Sbjct: 3 RQKIKIKKIDNVTARQVTFSKRRRGIFKKAEELS---VLCDAEVGLIIFSATGKLFEYPS 59
Query: 68 DNIHPLVKAY---SHARINELNQQHNDLLRQ-LDEEKEQQNMLKQMRRVKETQPRWWETP 123
++ ++ Y SH N+L + N + Q +D KE +Q+R++K +
Sbjct: 60 SSMKDIITKYNQHSHDN-NQLGRPQNLQVEQCVDLSKEVAERNQQLRQMKGEDFQG---- 114
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINE 152
LNL +L Q++ + +T L ++NE
Sbjct: 115 ---LNLDDLQQLEKTL----ETGLERVNE 136
>gi|195622196|gb|ACG32928.1| MADS-box transcription factor 3 [Zea mays]
Length = 260
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+G + R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G
Sbjct: 27 SGGDRQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRG 83
Query: 62 -MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+ + N+++ ++ Y A + E+N QH ++E + + + +
Sbjct: 84 RLYEYANNSVKSTIERYKKANSDTSNSGTVAEVNAQH--------YQQESSKLRQAIDSL 135
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + + L+EL QM+ ++ A+ NE
Sbjct: 136 QNANRTIVGDSIHTMGLRELKQMEGKLEKAINKIRARKNE 175
>gi|374432935|gb|AEZ51870.1| APETALA3-like MADS-box protein [Cymbidium ensifolium]
Length = 227
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 22/127 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR +GI KKASE+ + C P+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASELTVLCDAQLSLVMFSSTGKFSEYCSPTT 62
Query: 52 -VKAIANRFLGMSQLH--NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ 108
K+I +R+ +S ++ + + +H + E+NQ +RQ + E+ + +K+
Sbjct: 63 DTKSIYDRYQQVSGINLWSSQYEKMQNTLNH--LKEINQNLRKEIRQRNGEELEGMDIKE 120
Query: 109 MRRVKET 115
+R +++T
Sbjct: 121 LRGLEQT 127
>gi|189214317|gb|ACD85093.1| B-class MADS-box protein AP3-1 [Dendrobium hybrid cultivar]
Length = 227
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPST 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K + R+ GM L N + H +NE+NQ +RQ E+ + +K
Sbjct: 63 DIKGVYERYQVVTGMD-LWNAQYERMQNTLKH--LNEINQNLRKEIRQRKGEELEGMEIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|729464|sp|Q03488.1|FBP1_PETHY RecName: Full=Floral homeotic protein FBP1; AltName:
Full=Floral-binding protein 1
gi|169254|gb|AAA33731.1| transcription factor [Petunia x hybrida]
Length = 210
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVII--FASSGKMH 55
>gi|326502050|dbj|BAK06517.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 37 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRLYEYSN 93
Query: 68 DNIHPLVKAY--------SHARINELNQQH 89
+++ ++ Y S + E+N QH
Sbjct: 94 NSVKATIERYKKATSDTSSAGTVAEINAQH 123
>gi|290465703|gb|ADD25196.1| AG [Nuphar advena]
Length = 223
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR SG+ KKA +E LC V + G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALVIFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + LN + E + +Q+ ++++ + + E+
Sbjct: 60 NSVKATIDRYKKACADSLNSGTVSEANAQYYQHEAHKLRQQISKIQQDNRKMLGEGISEM 119
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
++++L ++ ++ +K NE
Sbjct: 120 SVRDLKNLEGKLEKSIGKIRSKKNE 144
>gi|45387427|gb|AAS60204.1| MADS-like protein RMADS222 [Oryza sativa Japonica Group]
Length = 247
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHAR--------INELNQQH 89
+++ V+ Y A + E+N QH
Sbjct: 60 NSVKSTVERYKKANSDTSNSGTVAEVNAQH 89
>gi|215512246|gb|ACJ68114.1| transparent TESTA16 protein [Brassica napus]
Length = 242
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN R +TFSKR SG+ KKA E+ LC + I F +L+
Sbjct: 3 RGKIEIKKIENRTARQVTFSKRRSGVIKKAHELSV---LCDAHIGLIV--FSATGKLYQH 57
Query: 69 NIHPLV 74
PL
Sbjct: 58 CTEPLT 63
>gi|119699075|gb|ABL96240.1| flowering locus C [Brassica rapa var. parachinensis]
Length = 197
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYS--HAR-INELNQQ--------HNDLLRQLDEEKEQQNM 105
DN+ ++ Y HA + LN Q HN+LL +D + + N+
Sbjct: 60 GDNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNV 109
>gi|55417902|gb|AAV51217.1| flowering locus C protein [Arabidopsis thaliana]
Length = 196
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
++K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 KKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRYG--------KQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>gi|33308109|gb|AAQ03090.1| AGAMOUS-like protein [Malus x domestica]
Length = 242
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKAYADPTNSGSVSEANTQFYQQEASKLRRQIREIQNSNRHILGEALSSL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N +EL ++ ++ +K NE
Sbjct: 135 NAKELKNLEGRLEKGISRIRSKKNE 159
>gi|295913291|gb|ADG57902.1| transcription factor [Lycoris longituba]
Length = 158
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIEMKKIEN+ +R +TF+KR +G++KKA +E LC V I
Sbjct: 4 RGKIEMKKIENKINRQVTFAKRRNGLFKKA---YELSVLCDAEVALIV 48
>gi|290465723|gb|ADD25206.1| AG3 [Nymphaea odorata]
Length = 218
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLFEYAN 59
Query: 68 DNIHPLVKAYSHA 80
+NI + Y A
Sbjct: 60 NNIKATIDRYKKA 72
>gi|220962027|gb|ACL93442.1| MAF2 [Arabidopsis thaliana]
Length = 182
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH---- 66
K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 5 KVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKSAS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y H D L LD ++ +N L ++ Q E+ VD
Sbjct: 60 GDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSXXEESNVDN 111
Query: 127 LNLQELLQMD 136
++ L+ ++
Sbjct: 112 ASVDTLISLE 121
>gi|224094895|ref|XP_002310283.1| MIKC mads-box transcription factor [Populus trichocarpa]
gi|10835358|gb|AAC13695.2| PTD protein [Populus trichocarpa]
gi|222853186|gb|EEE90733.1| MIKC mads-box transcription factor [Populus trichocarpa]
Length = 227
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRNGIFKKAQEL---TVLCDAKVSLI 46
>gi|357441085|ref|XP_003590820.1| MADS-box transcription factor [Medicago truncatula]
gi|355479868|gb|AES61071.1| MADS-box transcription factor [Medicago truncatula]
Length = 164
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 19/122 (15%)
Query: 17 IENEDDRLITFSKRGSGIYKKASEI------WEAIHLCQPSVKAIANRFLGMSQLHNDNI 70
+ NE + +TFSK +G++KKASE+ + A+ + PS K + + N+
Sbjct: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFS--------FGHPNV 52
Query: 71 HPLVKAYSHARINELNQQHNDLLRQ----LDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
++ Y + ++ N +L Q LD K+++N L +R+ ETQ WW P++
Sbjct: 53 DTVIDRYLSSTTSKQWPYLNAMLTQINDALDIGKKRENELSDLRKKNETQ-FWWACPIEG 111
Query: 127 LN 128
++
Sbjct: 112 MD 113
>gi|34921973|gb|AAQ83493.1| APETALA3 [Populus tomentosa]
Length = 240
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRNGIFKKAQEL---TVLCDAKVSLI 46
>gi|30523360|gb|AAP31678.1| flowering locus C [Brassica rapa]
gi|72255614|gb|AAZ66932.1| 117M18_13 [Brassica rapa]
Length = 197
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYS--HAR-INELNQQ--------HNDLLRQLDEEKEQQNM 105
DN+ ++ Y HA + LN Q HN+LL +D + + N+
Sbjct: 60 GDNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNV 109
>gi|224106151|ref|XP_002314062.1| predicted protein [Populus trichocarpa]
gi|222850470|gb|EEE88017.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+KKIEN + R +TFSKR +G+ KKA E+ AI LC V I
Sbjct: 3 RGKIEIKKIENTNSRQVTFSKRRAGLLKKAQEL--AI-LCDAEVAVIV 47
>gi|17933452|gb|AAK70216.1| MADS-box protein [Brassica napus]
gi|31580813|gb|AAP51081.1| MADS-box protein [Brassica rapa subsp. campestris]
gi|113015823|gb|ABI30000.1| flowering locus C2 [Brassica rapa subsp. pekinensis]
gi|408369184|gb|AFU61565.1| flowering locus C [Brassica napus]
gi|408369201|gb|AFU61573.1| flowering locus C [Brassica napus]
Length = 196
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G +L+N
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASG--KLYNF 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLD 97
DN+ ++ Y +QH D L+ LD
Sbjct: 58 SAGDNLVKILDRY--------GKQHADDLKALD 82
>gi|154551055|gb|ABS83561.1| APETALA3-like protein [Alpinia oblongifolia]
Length = 218
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN+ +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENQPNRQVTYSKRRSGIMKKARELTV---LCDAEVSII 46
>gi|281486459|gb|ADA70732.1| flowering locus C3 [Brassica rapa var. purpuraria]
Length = 197
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLMEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ L+ + + + ++ + E+ V
Sbjct: 60 GDNLVRILDRY--------GKQHADDLKALNLQSKALSYGSHNELLELVDSKLVESNVGG 111
Query: 127 LNLQELLQMDSAVDD 141
+++ L+Q++ +++
Sbjct: 112 VSVDTLVQLEGVLEN 126
>gi|356524804|ref|XP_003531018.1| PREDICTED: MADS-box protein SVP-like [Glycine max]
Length = 205
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 20/114 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R++I++KKI+N R +TFSKR G++KKA E+ LC + I F S+L
Sbjct: 3 RKRIQIKKIDNISSRQVTFSKRRKGLFKKAQELST---LCDADIALIV--FSATSKLFEY 57
Query: 67 -NDNIHPLV-KAYSHARINELNQ---------QHNDLLRQLDEEKEQQNMLKQM 109
+ ++H ++ + SH+ +N L++ N++LR+ E+K ++ L+QM
Sbjct: 58 ASSSMHQVIERRDSHSAMNRLDRPSIELQIENDSNEILRKKVEDKNRE--LRQM 109
>gi|342298428|emb|CBY05404.1| SHATTERPROOF1-like protein [Lepidium campestre]
Length = 252
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 3 GKKTKR--RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
G+ +K+ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I
Sbjct: 10 GESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIIFSTR 66
Query: 61 G-MSQLHNDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
G + + N+++ ++ Y A + E N Q+ ++E + +Q+R
Sbjct: 67 GRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRD 118
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
++ + + LN +EL ++ ++ +K NE A
Sbjct: 119 IQNSNRHIVGESLGSLNYKELKNLEGRLEKGISRVRSKKNEMLVA 163
>gi|189099165|gb|ACD76824.1| SHATTERPROOF2-like protein [Capsella bursa-pastoris]
Length = 246
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|37359695|dbj|BAC97837.1| duplicated [Ipomoea nil]
gi|117939125|dbj|BAF36711.1| DUPLICATED protein [Ipomoea nil]
Length = 247
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
M+ ++ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I
Sbjct: 11 MSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSR 67
Query: 61 G-MSQLHNDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
G + + N+++ + Y A I+E N Q ++E + +Q+
Sbjct: 68 GRLYEYANNSVKATIDRYKKACSDSTNTGSISEANTQF--------YQQEANKLRQQISN 119
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ + + NL++L ++S ++ AK NE
Sbjct: 120 LQNQNRNYMGEGLGGFNLRDLKNLESKIEKGISKIRAKKNE 160
>gi|169657214|gb|ACA62949.1| MADS-box protein [Asarum caudigerum]
Length = 225
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRGGIFKKAQEL---TVLCDAQVSLI 46
>gi|169117065|gb|ACA42767.1| shatterproof 2 [Brassica napus]
Length = 244
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQESSKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LNL+EL ++ ++
Sbjct: 127 LGESLGSLNLKELKNLEGRLE 147
>gi|162464068|ref|NP_001105946.1| AGAMOUS-like protein [Zea mays]
gi|2529340|gb|AAB81103.1| AGAMOUS-like protein [Zea mays]
gi|413947696|gb|AFW80345.1| zea mays MADS2 [Zea mays]
gi|413947697|gb|AFW80346.1| zea mays MADS2 [Zea mays]
Length = 259
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 37/197 (18%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
++ + R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G +
Sbjct: 30 RQGQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRL 86
Query: 63 SQLHNDNIHPLVKAYSHAR--------INELN----QQHNDLLRQLDEEKEQQNM----- 105
+ N+++ ++ Y A + E+N QQ + LRQ+ + N
Sbjct: 87 YEYANNSVKSTIERYKKANSDSSNSGTVAEVNAQYYQQESSKLRQMIHSLQNANTRNIVG 146
Query: 106 ----------LKQM-----RRVKETQPRWWETPVDELNLQELLQMDSAVDDLH-QTFLAK 149
LKQM + + + + R E E++ + +MD D+++ ++ +A+
Sbjct: 147 DSIHTMGLRDLKQMEGKLEKAIIKIRARKNELLYAEVDYMQKREMDLQTDNMYLRSKIAE 206
Query: 150 INEKTAAAAASSSVAPP 166
NE A + APP
Sbjct: 207 SNETGQPAMHMTMGAPP 223
>gi|13384058|gb|AAK21253.1|AF335240_1 MADS-box transcription factor FBP22 [Petunia x hybrida]
Length = 218
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K++MK+IEN R +TFSKR +G+ KKA +E LC V + G + + +
Sbjct: 6 RGKVQMKRIENATSRQVTFSKRRNGLMKKA---YELSVLCDAEVAVVIFSQRGRLYEFSS 62
Query: 68 DNIHPLVKAYSHARINELNQ---QHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
++ + Y L Q ++ L EE E NM K++ ++ ++ + +
Sbjct: 63 SSMQKTIDRYRECARETLTNNSIQAQQQIQYLKEETE--NMAKKIEVLEVSRRKLTGQSL 120
Query: 125 DELNLQELLQMDSAVD 140
++ EL Q+DS ++
Sbjct: 121 GSCSMNELQQIDSQLE 136
>gi|333408673|gb|AEF32148.1| MADS-box DNA-binding domain transcription factor [Brassica napus]
Length = 258
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN R +TFSKR SG+ KKA E+ LC + I F +L+
Sbjct: 19 RGKIEIKKIENRTARQVTFSKRRSGVIKKAHELSV---LCDAHIGLIV--FSATGKLYQH 73
Query: 69 NIHPLV 74
PL
Sbjct: 74 CTEPLT 79
>gi|133874713|gb|ABO40820.1| FLC [Brassica rapa subsp. chinensis]
Length = 196
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G +L+N
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASG--KLYNF 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLD 97
DN+ ++ Y +QH D L+ LD
Sbjct: 58 SAGDNLVKILDRY--------GKQHADDLKALD 82
>gi|22091475|emb|CAC81069.1| MADS box transcription factor [Daucus carota subsp. sativus]
Length = 216
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R +T+SKR +G+ KKA EI LC+ +V +
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGLIKKAKEI---TVLCEAAVSVV 46
>gi|343788211|gb|AEM60210.1| MADS box transcription factor [Gardenia jasminoides]
Length = 202
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 15 KKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-----NDN 69
K+IEN +R +T+SKR +GI KKA EI LC V I F ++H + N
Sbjct: 1 KRIENSSNRQVTYSKRRNGIMKKAKEI---TVLCDAKVSLII--FGTSGKMHEYISPSTN 55
Query: 70 IHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+ ++ AY + +L + +H +L ++D +KE +M ++R +K + L
Sbjct: 56 LTEMLDAYQRSTGKKLWDAKHENLSNEIDRVKKENDSMQIELRHLKGED-------ISSL 108
Query: 128 NLQELLQMDSAVDD 141
N +EL+ ++ A+++
Sbjct: 109 NYKELMVLEDALEN 122
>gi|365985269|ref|XP_003669467.1| hypothetical protein NDAI_0C05650 [Naumovozyma dairenensis CBS
421]
gi|343768235|emb|CCD24224.1| hypothetical protein NDAI_0C05650 [Naumovozyma dairenensis CBS
421]
Length = 429
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIE+K IE E +R +TF+KR +G++KKA E+ A+ LCQ V I
Sbjct: 3 RRKIEIKPIEEEKNRSVTFAKRKAGLFKKAHEL--AV-LCQVDVALIV 47
>gi|168048509|ref|XP_001776709.1| MIKCC MADS-domain protein PPMC6 [Physcomitrella patens subsp.
patens]
gi|162672001|gb|EDQ58545.1| MIKCC MADS-domain protein PPMC6 [Physcomitrella patens subsp.
patens]
Length = 284
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R KIE+KKIEN R +TFSKR G+ KKA E+ A+ LC V I G
Sbjct: 3 RGKIEIKKIENPTSRQVTFSKRRGGLLKKAHEL--AV-LCDAEVALIIFSSTGKLFEFAS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
+ ++ +++ YS ++D + +E + +Q+ R++ +Q +
Sbjct: 60 SGSMRDILERYSKCPDGVQTDGNSDFM-----GREVVKLRQQLERLQHSQRHMLGEDLQV 114
Query: 127 LNLQELLQMDSAVD 140
L + +LLQ++ +D
Sbjct: 115 LTVPDLLQLEQQLD 128
>gi|399950173|gb|AFP65771.1| TM3-like protein 1 [Iris fulva]
Length = 219
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +M++IENE R +TFSKR SG+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMRRIENETSRQVTFSKRRSGLLKKA---FELSVLCDAEVGVIVFSPRGRLFEFSS 59
Query: 68 DNIHPLVKAY-SHARINELNQQ 88
++ ++ Y SHA+ LN++
Sbjct: 60 SSMQRTIQRYKSHAKDVNLNKR 81
>gi|5805210|gb|AAD51887.1| floral homeotic protein AP3 [Arabidopsis thaliana]
gi|5805220|gb|AAD51892.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+D+L++QEL +++ D++ TF
Sbjct: 113 LDKLDIQELRRLE---DEMENTF 132
>gi|189099167|gb|ACD76825.1| SCHATTERPROOF2-like protein [Capsella bursa-pastoris]
Length = 246
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|95982005|gb|ABF57939.1| MADS-box transcription factor TaAGL39 [Triticum aestivum]
Length = 273
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
AG + R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I G
Sbjct: 33 AGSEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRG 89
Query: 62 -MSQLHNDNIHPLVKAYSHA 80
+ + N+++ ++ Y A
Sbjct: 90 RLYEYSNNSVKATIERYKKA 109
>gi|207298819|gb|ACI23561.1| agamous-like protein 2 [Gossypium barbadense]
Length = 244
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA-------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+++ ++ Y A + E+N Q ++E + Q+R ++ T
Sbjct: 75 NSVKATIERYKKASDSSNTGSVAEVNAQF--------YQQEADKLRNQIRNLQNTNRHML 126
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
V L ++EL ++S ++ +K NE
Sbjct: 127 GESVGGLPMKELKSLESRLEKGISRIRSKKNE 158
>gi|115488672|ref|NP_001066823.1| Os12g0501700 [Oryza sativa Japonica Group]
gi|91207147|sp|Q2QQA3.2|MAD20_ORYSJ RecName: Full=MADS-box transcription factor 20; AltName:
Full=OsMADS20
gi|113649330|dbj|BAF29842.1| Os12g0501700 [Oryza sativa Japonica Group]
Length = 233
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+++++IENE R +TFSKR G+ KKA EI A+ LC V AI G + H
Sbjct: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEI--AV-LCDVDVAAIVFSAKG-NLFHYA 58
Query: 69 NIHP----LVKAYSHARINELNQQHNDLLRQLDEEKEQQN-----MLKQMRRVKETQPRW 119
+ H +++ Y +EL + N+++ + E + + + ++ +K++Q
Sbjct: 59 SSHTTMERILEKYDR---HELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNL 115
Query: 120 WETPVDELNLQELLQMDSAVD 140
+D L LQ++ Q+++ +D
Sbjct: 116 MGQELDSLTLQDIQQLENQID 136
>gi|52548104|gb|AAU82055.1| SHATTERPROOF1 [Arabidopsis lyrata subsp. petraea]
Length = 235
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 3 GKKTKR--RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
G+ +K+ R KIE+K+IEN +R +TF KR +G+ KKA +E LC V +
Sbjct: 10 GESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTR 66
Query: 61 G-MSQLHNDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
G + + N+++ ++ Y A + E N Q+ ++E + +Q+R
Sbjct: 67 GRLYEYANNSVRGTIERYKKACSDAVNPPXVTEANTQY--------YQQEASKLRRQIRD 118
Query: 112 VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
++ + + LN +EL ++ ++ +K NE A
Sbjct: 119 IQNSNRHIVGESLGSLNFKELKNLEXXLEKGISRVRSKKNELLVA 163
>gi|197244651|dbj|BAG68947.1| APETALA1/FRUITFUL like protein [Hydrangea macrophylla]
Length = 250
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R ++++K+IEN+ +R +TFSKR SG+ KKA EI LC V I G + +
Sbjct: 3 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISV---LCDAEVALIVFSTKGKLFEYAT 59
Query: 68 DN-IHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
D + +++ Y +E + DL Q E + ++ ++ +Q + +D
Sbjct: 60 DTCMERILERYERYSYSERQLKATDLESQGSWTLEHAKLKARVEVLQRSQRHYMGEDLDT 119
Query: 127 LNLQELLQMDSAVDD 141
L L+EL ++ +D+
Sbjct: 120 LGLKELQNLEHQIDN 134
>gi|169117067|gb|ACA42768.1| shatterproof 2 [Brassica napus]
Length = 244
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQESSKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LNL+EL ++ ++
Sbjct: 127 LGESLGSLNLKELKNLEGRLE 147
>gi|225543467|ref|NP_001139382.1| serum response factor [Nasonia vitripennis]
Length = 353
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 141 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 179
>gi|32452884|emb|CAC86184.1| MADS box protein [Malus x domestica]
Length = 247
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R K++MK+IEN+ R +TFSKR SG+ KKA EI LC V I +G
Sbjct: 3 RGKVQMKRIENKISRQVTFSKRRSGLLKKAHEIS---VLCDAEVAVIVFSTVG 52
>gi|427781847|gb|JAA56375.1| Putative blistered [Rhipicephalus pulchellus]
Length = 386
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 78 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 116
>gi|255635718|gb|ACU18208.1| unknown [Glycine max]
Length = 188
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-M 62
KKT R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G +
Sbjct: 17 KKTGR-GKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRL 72
Query: 63 SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ N+++ ++ Y A N + ++E + +Q+R ++
Sbjct: 73 YEYANNSVIGTIERYKKACAASTNAESVSEANTQFYQQEASKLKRQIRDIQNLNRHILGE 132
Query: 123 PVDELNLQELLQMDSAVDDL--------HQTFLAKI 150
+ L+L+EL ++S ++ H+T A I
Sbjct: 133 GLSSLSLKELKNLESRLEKGLSRVRSRKHETLFADI 168
>gi|22090620|dbj|BAC06830.1| MADS-box protein PpMADS2 [Physcomitrella patens subsp. patens]
Length = 306
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ ++E N+ D+L
Sbjct: 60 CSIEEVIARFANLPMHERNKSFEDML 85
>gi|413956056|gb|AFW88705.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 146
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHNDNI 70
K+E+KKIEN +R +TFSKR G++KKA+E+ AI LC + I F G +++ +
Sbjct: 5 KVELKKIENPTNRQVTFSKRRMGLFKKANEV--AI-LCDAQIGVII--FSGSGRMYEYSS 59
Query: 71 HP 72
P
Sbjct: 60 PP 61
>gi|62867345|dbj|BAD95987.1| MADS-box transcription factor AP3 [Agapanthus praecox]
Length = 214
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R +IE+KKIEN R +T+SKR GI KKA E+ LC V + G D
Sbjct: 3 RGRIEIKKIENSTTRQVTYSKRRLGIMKKAKEL---TVLCDAEVSVLMFSSTGK---FAD 56
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV-----KETQPRWWETP 123
P S I + QQ + D+ ++ QN L+++ KE + R E
Sbjct: 57 YCSPSTNTKS---IMDRYQQATGIDLWKDQFEKMQNTLRRLEETNRKLRKEIRQRMGE-D 112
Query: 124 VDELNLQELLQMDSAVDD 141
+DEL+++E+ ++ ++D+
Sbjct: 113 LDELSIKEMRGLEQSLDE 130
>gi|46020018|dbj|BAD13495.1| MADS-box protein [Asparagus officinalis]
Length = 206
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R KIE+K+IEN +R +TFSKR +GI KKA EI C+ + + LG
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIMKKAREISVP---CESEISVVVFSSLG 52
>gi|45181459|gb|AAS55409.1| MADS-box protein [Brassica rapa]
Length = 197
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYS--HAR-INELNQQ--------HNDLLRQLDEEKEQQNM 105
DN+ ++ Y HA + LN Q HN+LL +D + + N+
Sbjct: 60 GDNLVRILDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNV 109
>gi|242093862|ref|XP_002437421.1| hypothetical protein SORBIDRAFT_10g026690 [Sorghum bicolor]
gi|241915644|gb|EER88788.1| hypothetical protein SORBIDRAFT_10g026690 [Sorghum bicolor]
Length = 246
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R K+EMK+IEN+ R +TFSKR G+ KKA E+ A+ LC V I F +L +
Sbjct: 3 RGKVEMKRIENKVSRQVTFSKRRKGLLKKAEEL--AV-LCDVDVGVIG--FSERGKLFDY 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
++ L+ Y A +L Q L D +++QQ M ++ +++
Sbjct: 58 SSPASLDDLIHRYEAATNTQLYHQE---LHYTDHQEQQQQMAAKISKLQ 103
>gi|56603618|dbj|BAD80743.1| MADS-box transcription factor [Tradescantia reflexa]
Length = 188
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ +V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCESAVSVV 46
>gi|290465717|gb|ADD25203.1| AG1-1 [Nymphaea odorata]
Length = 224
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN +R +TF KR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y S + E N Q+ + E + +Q+ ++++ +
Sbjct: 60 NSVRGTIERYKKAYAESSSSGAVAETNAQYY--------QHEAHKLRQQISKIQQDNRQM 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
V E++L++L +++ ++
Sbjct: 112 LGEGVSEMSLRDLKSLENKLE 132
>gi|218196828|gb|EEC79255.1| hypothetical protein OsI_20021 [Oryza sativa Indica Group]
gi|222631644|gb|EEE63776.1| hypothetical protein OsJ_18598 [Oryza sativa Japonica Group]
Length = 210
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGV---LCDAEVGVV 46
>gi|410610261|gb|AFV74899.1| PISTILLATA-like protein [Schoepfia jasminodora]
Length = 218
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 26/155 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K+E+K+IEN +R +T+SKR +GI KKA EI LC V + F ++H
Sbjct: 3 RGKMEIKRIENSSNRQVTYSKRRNGIIKKAKEITV---LCDAQVSLVI--FASSGKMHEF 57
Query: 67 ----NDNIHPLVKAYSHARINEL---NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPR 118
+ L + + H + + +H DL +L+ +KE +M Q+R +K
Sbjct: 58 CSPSTQVVDILDRYHKHCGSSGKKLWDAKHEDLSHELERIKKENDSMQIQLRHLKGHD-- 115
Query: 119 WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ L L+EL+ + A+D T L I EK
Sbjct: 116 -----ITSLPLKELMATEEALD----TGLDGIREK 141
>gi|108862317|gb|ABG21913.1| Floral homeotic protein AGAMOUS, putative, expressed [Oryza sativa
Japonica Group]
Length = 201
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 25/145 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKET 115
N+N+ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 58 SNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQESAKLRHQIQMLQNT 110
Query: 116 QPRWWETPVDELNLQELLQMDSAVD 140
V L+L+EL Q++S ++
Sbjct: 111 NKHLVGDNVSNLSLKELKQLESRLE 135
>gi|171194269|gb|ACB45306.1| MIKC-type MADS-box transcription factor WM29B [Hordeum vulgare]
gi|326491353|dbj|BAK05776.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 1 MAGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFL 60
+AG + R +IE+K+IEN +R +TF KR +G+ KKA +E LC V +
Sbjct: 32 VAGSEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSR 88
Query: 61 G-MSQLHNDNIHPLVKAYSHA 80
G + + N+++ ++ Y A
Sbjct: 89 GRLYEYSNNSVKATIERYKKA 109
>gi|413954329|gb|AFW86978.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 187
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIH 46
G+ ++ RQ+IE++ IE+ +TFSKR SG+ KKASE++ +
Sbjct: 2 GRPSRGRQRIEIRHIEDGGRLQVTFSKRKSGLQKKASELFLLCGSPVAIVIFSPGKKVFA 61
Query: 47 LCQPSVKAIANRFLGM-SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
L PSV + R+ + + D + P+++ + ++R+ +E K + M
Sbjct: 62 LGTPSVDHVLRRYAPIPGEEEEDGLLPVLQDTDDVSAITDRVEVEGIVRRTEETKARSVM 121
Query: 106 LKQM-----RRVKETQPR-----WWETPVDELNLQEL 132
K + V++T + WWE +L EL
Sbjct: 122 EKARMDAIGKTVRQTAAKAGRKFWWEADSGKLGEAEL 158
>gi|342161739|gb|AEL16646.1| MADS-box protein AGL15 [Dimocarpus longan]
Length = 254
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN + R +TFSKR +G+ KKA E+ AI LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRAGLLKKAQEL--AI-LCDAEVAVIV 47
>gi|187942348|gb|ACD39984.1| MADS3 [Carica papaya]
Length = 247
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+K+IEN+ +R +TFSKR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGRVELKRIENKINRQVTFSKRRNGLLKKA---YELSVLCDAEVALII--FSSRGKLYEF 57
Query: 69 NIHPLVKAYS-HARINELNQQHNDLLRQLDEEKEQQNMLK-QMRRVKETQPRWWETPVDE 126
+ K + R + N Q N L R+ ++ LK + ++ TQ +
Sbjct: 58 GSTGIAKTLERYQRCSSFNPQENSLERETQSWYQEVAKLKAKYESLQRTQRHLLGEDLGP 117
Query: 127 LNLQELLQMDSAVDD 141
LN++EL ++ ++
Sbjct: 118 LNIKELQNLEKQLEG 132
>gi|324497967|gb|ADY39748.1| PISTILLATA-like protein [Ananas comosus]
Length = 197
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + G MS+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCDAQVSVVIFSSSGKMSEYCS 59
Query: 68 DN--IHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
+ + L++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLPKLLEKYQQNSGKKLWDAKHENLSAEIDRIKKENDNMQIELRHMK 109
>gi|297824245|ref|XP_002880005.1| hypothetical protein ARALYDRAFT_321962 [Arabidopsis lyrata subsp.
lyrata]
gi|297325844|gb|EFH56264.1| hypothetical protein ARALYDRAFT_321962 [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTVTEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>gi|148540536|gb|ABQ85946.1| MADS-box transcription factor PI-like 1 [Trochodendron aralioides]
Length = 210
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI---ANRFLGMSQL 65
R KIE+K+IEN +R +T+SKR +GI KKA EI A+ LC V + +N +
Sbjct: 3 RGKIEIKRIENVSNRQVTYSKRKNGIIKKAREI--AV-LCDAQVSLVIISSNGRMAEFCS 59
Query: 66 HNDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + + Y + +L + +H L +++D +KE NM ++R +K
Sbjct: 60 PSTTLTKFLDRYHRSSATKLWDAKHEYLSKEVDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
+ L L+EL+ ++ A+ +
Sbjct: 113 IVSLKLEELISLEEALQN 130
>gi|414869624|tpg|DAA48181.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 145
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+E+KKIEN +R +TFSKR G++KK +E+ AI LC + I F G +++
Sbjct: 3 RGKVELKKIENPTNRQVTFSKRQMGLFKKENEV--AI-LCDAQIGVIV--FSGSGRMYEY 57
Query: 69 NIHP 72
+ P
Sbjct: 58 SSPP 61
>gi|51849643|dbj|BAD42353.1| PISTILLATA-like protein [Brasenia schreberi]
Length = 222
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR GI KKA EI LC +V I F +++
Sbjct: 3 RGKIEIKRIENSSNRQVTFSKRKQGILKKAKEISV---LCDANVFLIL--FSSAGKMYEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ N+ ++ Y A +L + +H L +LD +KE NM ++R +
Sbjct: 58 TSPSANLENILTRYQTASGKKLWDARHEYLNHELDRIKKEHDNMQIELRHLNGEDLSSLS 117
Query: 122 TPVDELNLQELLQM 135
+D NL++ LQ+
Sbjct: 118 V-IDLRNLEDSLQI 130
>gi|15240706|ref|NP_196883.1| agamous-like MADS-box protein AGL15 [Arabidopsis thaliana]
gi|3912997|sp|Q38847.1|AGL15_ARATH RecName: Full=Agamous-like MADS-box protein AGL15
gi|790635|gb|AAA65653.1| AGL15 [Arabidopsis thaliana]
gi|10177344|dbj|BAB10600.1| floral homeotic protein AGL15 [Arabidopsis thaliana]
gi|332004558|gb|AED91941.1| agamous-like MADS-box protein AGL15 [Arabidopsis thaliana]
Length = 268
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN + R +TFSKR SG+ KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRSGLLKKARELS---VLCDAEVAVIV 47
>gi|242081541|ref|XP_002445539.1| hypothetical protein SORBIDRAFT_07g021110 [Sorghum bicolor]
gi|241941889|gb|EES15034.1| hypothetical protein SORBIDRAFT_07g021110 [Sorghum bicolor]
Length = 73
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+I+N R +TFSKR SG++KKA E+ AI LC V + F +L++
Sbjct: 3 RGKIEIKRIDNATSRQVTFSKRRSGLFKKAKEL--AI-LCDAEVGLVV--FSSTGRLYD- 56
Query: 69 NIHPLVKAYSHARINELNQQH 89
++ R++E+ + +
Sbjct: 57 --------FASTRVSEIARIY 69
>gi|224134178|ref|XP_002327775.1| MIKC mads-box transcription factor [Populus trichocarpa]
gi|222836860|gb|EEE75253.1| MIKC mads-box transcription factor [Populus trichocarpa]
Length = 229
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRF 59
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC V I N+F
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRNGIFKKAQEL---TVLCDAKVSLIMFSNTNKF 54
>gi|62122359|dbj|BAD93174.1| MADS-box transcription factor GbMADS10 [Ginkgo biloba]
Length = 229
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR G+ KKA E+ LC + I F +L
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSV---LCDAELGLII--FSSTGKLFEY 57
Query: 67 ---NDNIHPLVKAY---SHARINELNQQH 89
++ +++ Y S AR++E + QH
Sbjct: 58 SSATSSMRKIIERYQKVSGARLSEFDNQH 86
>gi|42795382|gb|AAS46018.1| MADS-box protein GLO1 [Petunia x hybrida]
Length = 210
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVII--FASSGKMH 55
>gi|82879996|gb|ABB92623.1| PISTILLATA-like protein [Alpinia oblongifolia]
Length = 208
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI +I LC+ V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREI--SI-LCEAQVSVV 46
>gi|52076733|dbj|BAD45645.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 276
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
G +K +QKIEM I+ ++ R +TFSKR G++KKASEI
Sbjct: 92 GGTSKGKQKIEMCCIDGKEKRQVTFSKRRRGLFKKASEI 130
>gi|33090197|gb|AAP93897.1| APETALA3-1 [Brassica napus]
Length = 217
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLHEF 57
Query: 67 ---NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N ++ Y ++ H + +++ ++ +L+ R+++ +
Sbjct: 58 ISPNTTTKEIIDLYQTVSDVDVWSAHYERMQET-----KRKLLETNRKLRTQIKQRLGEC 112
Query: 124 VDELNLQELLQMDSAVDD 141
+DEL++QEL ++ +++
Sbjct: 113 LDELDIQELRSLEEEMEN 130
>gi|115463981|ref|NP_001055590.1| Os05g0423400 [Oryza sativa Japonica Group]
gi|73920927|sp|Q40703.3|MADS4_ORYSJ RecName: Full=MADS-box transcription factor 4; AltName:
Full=OsMADS4
gi|53980849|gb|AAV24770.1| putative MADS box protein [Oryza sativa Japonica Group]
gi|113579141|dbj|BAF17504.1| Os05g0423400 [Oryza sativa Japonica Group]
gi|215712375|dbj|BAG94502.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGV---LCDAEVGVV 46
>gi|260780012|gb|ACX50635.1| MADS-box2 transcription factor [Guzmania wittmackii x Guzmania
lingulata]
Length = 225
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN +R +T+SKR +GI KKA E+ LC V I N+F
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRTGIMKKAKELTV---LCDADVSLIMFSSTNKFSEYCS 59
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
D + + IN + Q+ + L+ KE L+ KE + R E +
Sbjct: 60 PSTDTKKIFDRYQQVSGINLWSAQYERMQNTLNHLKEINRNLR-----KEIRQRMGE-EL 113
Query: 125 DELNLQELLQMDSAVDD 141
D L+ EL ++ +D+
Sbjct: 114 DGLDFYELRGLEQNLDE 130
>gi|51243298|gb|AAT99429.1| PI-like MADS-box protein [Alpinia hainanensis]
Length = 208
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI +I LC+ V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREI--SI-LCEAQVSVV 46
>gi|116831312|gb|ABK28609.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++ +
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDIQNSNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LN +EL ++ ++ +K NE A
Sbjct: 127 VGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVA 163
>gi|333952815|gb|AEG25797.1| APETALA3-like protein [Cocculus trilobus]
Length = 222
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+EMK+IEN +R +T+SKR SGI KKA E+ LC V I F G + ++
Sbjct: 2 RGKMEMKRIENSTNRQVTYSKRRSGIMKKAREL---TVLCDAEVSLIM--FSGTGKF-SE 55
Query: 69 NIHPLV 74
I P V
Sbjct: 56 YISPSV 61
>gi|237865362|gb|ACR25199.1| flowering locus C [Brassica rapa var. purpuraria]
Length = 196
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G +L+N
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASG--KLYNF 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLD 97
DN+ ++ Y +QH D L+ LD
Sbjct: 58 SAGDNLVKILDRY--------GKQHADDLKALD 82
>gi|224132610|ref|XP_002327838.1| predicted protein [Populus trichocarpa]
gi|224147187|ref|XP_002336425.1| predicted protein [Populus trichocarpa]
gi|222834974|gb|EEE73423.1| predicted protein [Populus trichocarpa]
gi|222837247|gb|EEE75626.1| predicted protein [Populus trichocarpa]
Length = 173
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 32/178 (17%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
K+T+ RQKIE+KKIE + + +TFSKR G+ KKASE+ +
Sbjct: 3 KQTQGRQKIEIKKIEEKSNLQVTFSKRRGGLVKKASELSLLCGAQVAILAFSPGKKVFAF 62
Query: 48 CQPSVKAIANRFLGMSQLHND-----NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQ 102
P V + +R+L S + N P V+ + N+++ + L++L+EEK+Q
Sbjct: 63 GHPDVDMVLDRYLSDSSTARELGAVNNNDPQVQQW--------NKEYEEALKELEEEKKQ 114
Query: 103 QNMLKQMRRVKETQPR---WWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAA 157
M +Q +V E WW+ P+D++ L+EL + A+++L + A+ NE T A+
Sbjct: 115 VAMAEQWNKVCENDVNARFWWDEPIDDMGLEELEEYVRAMEELKKNVAARANELTMAS 172
>gi|48727598|gb|AAT46096.1| AGAMOUS-like protein [Akebia trifoliata]
Length = 229
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 10 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEFSN 66
Query: 68 DNIHPLVKAYSHARINELN 86
+I ++ Y A + N
Sbjct: 67 SSIKSTIERYKKASADSSN 85
>gi|5805410|gb|AAD51984.1| floral homeotic protein PI [Arabidopsis thaliana]
Length = 208
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+K+IEN ++R++TFSKR +G+ KKA EI
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEI 35
>gi|356527759|ref|XP_003532475.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Glycine max]
Length = 161
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 30/130 (23%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLC-------------------Q 49
R+KIE+ ++++ + + +TFSKR +G++KKA+E+ LC
Sbjct: 3 RRKIEITELKDSNTKQVTFSKRRTGLFKKANELS---ILCGAEVAVVVFSPGNNPYSFGH 59
Query: 50 PSVKAIANRFLGMSQLHNDNIHPLVKAYSH--ARINELNQQHNDLLRQ-LDEEKEQQNML 106
PSV +A++FL ND V+ S A ++ LNQQ +D+ + L+E+K+ +
Sbjct: 60 PSVDVVADKFLKQEPKSND-----VQGTSTEVADMDRLNQQLSDVQNEILEEQKKAAELN 114
Query: 107 KQMRRVKETQ 116
++M++ TQ
Sbjct: 115 ERMKQKGVTQ 124
>gi|223278228|dbj|BAH22477.1| dormancy-associated MADS-box transcription factor 6 [Prunus mume]
Length = 241
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 29/145 (20%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+KI++KKI+ R +TFSKR G++KKA+E+ LC+ V + ++ S
Sbjct: 6 REKIKIKKIDYLPARQVTFSKRRRGLFKKAAELS---VLCESEVAVVIFSATDKLFHYSS 62
Query: 65 LHNDNIHPLVKAYSHA------RINEL---NQQHNDLLRQLDEEKEQQNMLKQMRRVKET 115
+N+ KA++ + EL N+ H L ++L+E+ Q L+QM+
Sbjct: 63 SSTENVIERYKAHTGGVEKSDKQFLELQLENENHIKLSKELEEKSRQ---LRQMKG---- 115
Query: 116 QPRWWETPVDELNLQELLQMDSAVD 140
++ LNL ELL+++ V+
Sbjct: 116 ------EDLEGLNLDELLKLEQLVE 134
>gi|162463499|ref|NP_001105136.1| MADS16 [Zea mays]
gi|13274178|emb|CAC33848.1| putative MADS-domain transcription factor [Zea mays]
gi|223973075|gb|ACN30725.1| unknown [Zea mays]
gi|414879378|tpg|DAA56509.1| TPA: putative MADS-box transcription factor family protein [Zea
mays]
Length = 209
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGILKKAREISV---LCDAEVGVVV--FSSAGKLY-D 56
Query: 69 NIHP---LVKAYSHARINE----LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWW 120
P L K + N ++H L ++D +KE M ++R +K
Sbjct: 57 YCSPKTSLSKILEKYQTNSGKILWGEKHKSLSAEIDRIKKENDTMQIELRHLKGED---- 112
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ L ++L+ ++ A+D+ L +NEK
Sbjct: 113 ---LNSLQPKDLIMIEEALDN----GLTNLNEK 138
>gi|195023886|ref|XP_001985768.1| GH20989 [Drosophila grimshawi]
gi|193901768|gb|EDW00635.1| GH20989 [Drosophila grimshawi]
Length = 478
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 185 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 223
>gi|99109361|gb|ABF67489.1| MADS-domain protein [Impatiens hawkeri]
Length = 259
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G+++KA E+ LC + + F S+LH +
Sbjct: 3 RGKIQIKRIENDTNRQVTYSKRRNGLFRKAGEL---TVLCDAKISILM--FSSTSKLH-E 56
Query: 69 NIHPLVKA 76
I P + A
Sbjct: 57 FISPSISA 64
>gi|195436386|ref|XP_002066149.1| GK22205 [Drosophila willistoni]
gi|194162234|gb|EDW77135.1| GK22205 [Drosophila willistoni]
Length = 499
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 194 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 232
>gi|38680585|gb|AAR26628.1| MADS box transcription factor [Phalaenopsis equestris]
gi|54043003|gb|AAV28492.1| MADS box AP3-like protein 17 [Phalaenopsis hybrid cultivar]
Length = 227
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPST 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K I R+ GM L N + H +NE+NQ +R+ E+ + +K
Sbjct: 63 DIKGIYERYQVVTGMD-LWNAQYERMQNTLKH--LNEINQNLRKEIRRRKGEELEGMDIK 119
Query: 108 QMRRVKET 115
Q+R +++T
Sbjct: 120 QLRGLEQT 127
>gi|20513262|dbj|BAB91551.1| MADS-box transcription factor [Lilium regale]
Length = 210
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAQVSVV 46
>gi|317106708|dbj|BAJ53208.1| JHL06B08.10 [Jatropha curcas]
Length = 254
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN + R +TFSKR SG+ KKA E+ LC V I G + + +
Sbjct: 3 RGKIEIKKIENLNSRQVTFSKRRSGLIKKAKELS---VLCDAEVAVIVFSSTGKLYEFSS 59
Query: 68 DNIHPLVKAYSHA 80
++ + YS
Sbjct: 60 SSMEQTLSRYSKG 72
>gi|260730001|gb|ABW96392.2| AP3-related protein A [Dendrobium moniliforme]
Length = 227
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQLSLIMFSSTGKLADYCSPST 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K + R+ GM L N + H +NE+NQ +RQ E+ + +K
Sbjct: 63 DIKGVYERYQVVTGMD-LWNAQYERMQNTLMH--LNEINQNLRKEIRQRKGEELEGMEIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|168008840|ref|XP_001757114.1| MIKCC MADS-domain protein PPMC5 [Physcomitrella patens subsp.
patens]
gi|162691612|gb|EDQ77973.1| MIKCC MADS-domain protein PPMC5 [Physcomitrella patens subsp.
patens]
Length = 271
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQL--- 65
R KIE+KKIEN R +TFSKR G+ KKA E+ A+ LC V I F +L
Sbjct: 3 RGKIEIKKIENPTSRQVTFSKRRGGLLKKAHEL--AV-LCDADVALII--FSSTGKLFEF 57
Query: 66 -HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
+ ++ +++ YS ++D L +E + +++ R++ +Q +
Sbjct: 58 ASSGSMRDILERYSKCPDGSQTGVNSDFL-----GREVVKLRQELERLQHSQRHMLGEDL 112
Query: 125 DELNLQELLQMDSAVD 140
L + +LLQ++ +D
Sbjct: 113 QVLTVPDLLQLEQQLD 128
>gi|161158768|emb|CAM59042.1| MIKC-type MADS-box transcription factor WM3A [Triticum aestivum]
Length = 252
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY--SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+++ V Y +HA + ++ Q ++E + Q++ ++ T V
Sbjct: 60 NSVKATVDRYKKAHACGSTSGVPLIEVNAQQYYQQEAAKLRHQIQMLQSTNKHLVGDSVG 119
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
L+L+EL Q++S ++ A+ NE
Sbjct: 120 NLSLKELKQLESRLEKGIAKIRARKNE 146
>gi|66270024|gb|AAY43347.1| flowering locus C [Arabidopsis thaliana]
Length = 119
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
DN+ ++ Y +QH D L+ LD + + N
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALN 89
>gi|862642|gb|AAC49081.1| MADS-box protein AGL13 [Arabidopsis thaliana]
Length = 228
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN+ R +TFSKR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEVKRIENKITRQVTFSKRKSGLLKKA---YELSVLCDAEVSLIIFSTGGKLYEFSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+ ++ Y + N L+ ND L
Sbjct: 60 VGVGRTIERYYRCKDNLLD---NDTL 82
>gi|5805240|gb|AAD51902.1| floral homeotic protein AP3 [Arabidopsis thaliana]
Length = 232
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D+ TF
Sbjct: 113 LDELDIQELRRLE---DEKENTF 132
>gi|296087416|emb|CBI34005.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
RQKI++KKI+N R +TFSKR G++KKA E+ LC + I F +L
Sbjct: 3 RQKIQIKKIDNTAARQVTFSKRRRGLFKKAQELS---TLCDAEIALIV--FSAAGKLFE- 56
Query: 69 NIHPLVKAYSHARINELNQQHN 90
YS + ++++ ++HN
Sbjct: 57 --------YSSSSVSQVIERHN 70
>gi|29372756|emb|CAD23413.1| m23 [Zea mays]
Length = 304
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+G + R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G
Sbjct: 53 SGGDRQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRG 109
Query: 62 -MSQLHNDNIHPLVKAYSHAR--------INELNQQH 89
+ + N+++ ++ Y A + E+N QH
Sbjct: 110 RLYEYANNSVKSTIERYKKANSDTSNSGTVAEVNAQH 146
>gi|84578879|dbj|BAE72882.1| GLOBOSA homologue [Verbena x hybrida]
Length = 212
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 31/154 (20%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDAQVSVII--FASSGKMHE- 56
Query: 69 NIHPLVKAYSHARINELNQQH--------NDLLRQLDEE-----KEQQNMLKQMRRVKET 115
+ S ++ L+Q H + QLD E KE +M ++R +K
Sbjct: 57 -----FCSPSTTLVDMLDQYHKLSGKRLWDAKHEQLDNEINRVKKENDSMQIELRHLKGE 111
Query: 116 QPRWWETPVDELNLQELLQMDSAVDDLHQTFLAK 149
+ LN +EL+ ++ A+++ T AK
Sbjct: 112 D-------ISTLNYKELMVLEEALENGISTLKAK 138
>gi|90200402|gb|ABD92703.1| MADS box protein [Lilium longiflorum]
gi|197690831|dbj|BAG69626.1| MADS-box transcription factor [Lilium formosanum x Lilium
longiflorum]
gi|338224225|gb|AEI88009.1| MADS box protein [Lilium longiflorum]
Length = 210
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCEAQVSVV 46
>gi|15233045|ref|NP_191671.1| agamous-like MADS-box protein AGL13 [Arabidopsis thaliana]
gi|12643743|sp|Q38837.2|AGL13_ARATH RecName: Full=Agamous-like MADS-box protein AGL13
gi|6850879|emb|CAB71042.1| MADS-box protein AGL13 [Arabidopsis thaliana]
gi|332646637|gb|AEE80158.1| agamous-like MADS-box protein AGL13 [Arabidopsis thaliana]
Length = 244
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN+ R +TFSKR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEVKRIENKITRQVTFSKRKSGLLKKA---YELSVLCDAEVSLIIFSTGGKLYEFSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+ ++ Y + N L+ ND L
Sbjct: 60 VGVGRTIERYYRCKDNLLD---NDTL 82
>gi|255585205|ref|XP_002533305.1| Floral homeotic protein DEFICIENS, putative [Ricinus communis]
gi|223526870|gb|EEF29082.1| Floral homeotic protein DEFICIENS, putative [Ricinus communis]
Length = 235
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTV---LCDAKVSLI 46
>gi|195643208|gb|ACG41072.1| MADS-box transcription factor 29 [Zea mays]
Length = 259
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR G+ KKA+E+ A+ LC V + G M + +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGLLKKANEL--AV-LCDARVGVVIFSSTGKMFEYCS 59
Query: 68 D--NIHPLVKAYSHA---RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
++ L++ Y HA E+N LL + E + + +RR
Sbjct: 60 PACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRR 108
>gi|342298418|emb|CBY05399.1| SHATTERPROOF2-like protein [Lepidium appelianum]
Length = 248
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSITEANTQY--------YQQESSKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++ ++
Sbjct: 127 LGESLGSLNFKELKNLEGRLE 147
>gi|15231135|ref|NP_191437.1| agamous-like MADS-box protein AGL1 [Arabidopsis thaliana]
gi|113511|sp|P29381.1|AGL1_ARATH RecName: Full=Agamous-like MADS-box protein AGL1; AltName:
Full=Protein SHATTERPROOF 1
gi|166588|gb|AAA32730.1| transcription factor [Arabidopsis thaliana]
gi|7630073|emb|CAB88295.1| shatterproof 1 (SHP1)/ agamous-like 1 (AGL1) [Arabidopsis thaliana]
gi|21592324|gb|AAM64275.1| shatterproof 1 (SHP1)/ agamous-like 1 (AGL1) [Arabidopsis thaliana]
gi|52548058|gb|AAU82032.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548060|gb|AAU82033.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548062|gb|AAU82034.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548064|gb|AAU82035.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548066|gb|AAU82036.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548068|gb|AAU82037.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548070|gb|AAU82038.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548072|gb|AAU82039.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548074|gb|AAU82040.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548076|gb|AAU82041.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548078|gb|AAU82042.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548080|gb|AAU82043.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548082|gb|AAU82044.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548084|gb|AAU82045.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548086|gb|AAU82046.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548088|gb|AAU82047.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548090|gb|AAU82048.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548092|gb|AAU82049.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548094|gb|AAU82050.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548096|gb|AAU82051.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548098|gb|AAU82052.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548100|gb|AAU82053.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|52548102|gb|AAU82054.1| SHATTERPROOF1 [Arabidopsis thaliana]
gi|332646308|gb|AEE79829.1| agamous-like MADS-box protein AGL1 [Arabidopsis thaliana]
Length = 248
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++ +
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDIQNSNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LN +EL ++ ++ +K NE A
Sbjct: 127 VGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVA 163
>gi|375155232|gb|AFA37966.1| SVP4 [Actinidia deliciosa]
Length = 215
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
RQ+I++KKI+N R +TFSKR G++KKA E+ LC + I F +L
Sbjct: 3 RQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELS---TLCDAEIALIV--FSATGRLFE- 56
Query: 69 NIHPLVKAYSHARINELNQQHN 90
YS + +N++ ++HN
Sbjct: 57 --------YSSSSMNQVIERHN 70
>gi|353255839|gb|AEQ75405.1| APETALA3-like protein 4 [Narcissus tazetta var. chinensis]
Length = 220
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+KKIEN +R +T+SKR GI KKA+E+ LC V I G +
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRLGIMKKATEL---TVLCDAEVSVIMFSNTGKCA---E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV-----KETQPRWWETP 123
P + S RI + QQ + ++ ++ QN LK+++ + KE + R E
Sbjct: 57 YCSP---STSTKRIMDRYQQVTGIDLWNEQYEKMQNTLKRLQEINQNLRKEIRQRIGE-D 112
Query: 124 VDELNLQELLQMDSAVDD 141
+D L++ L ++ ++D+
Sbjct: 113 LDGLSVTHLRGLEQSLDE 130
>gi|126428415|gb|ABO13928.1| PISTILLATA-like protein [Papaver somniferum]
Length = 174
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 13/147 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF+KR +G+ KKA EI +I LC V + G M++ +
Sbjct: 3 RGKIEIKRIENSTNRQVTFAKRKNGLLKKAREI--SI-LCDADVSVVMFSEAGNMTEYSS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
+ + Y L + +H L ++D KE N+ ++R +K +
Sbjct: 60 SPLIEQLARYQKESGKTLWDVKHERLSAEIDRVRKENSNLQIEIRHLKGED-------LK 112
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
L+ QEL +++A++D + AKI E
Sbjct: 113 PLSPQELHALENALEDGYACPRAKIKE 139
>gi|27151621|sp|Q9XGJ4.1|GGM13_GNEGN RecName: Full=MADS-box protein GGM13
gi|5019464|emb|CAB44459.1| putative MADS domain transcription factor GGM13 [Gnetum gnemon]
Length = 237
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR G+ KKA E+ LC + I F +L
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSV---LCDAELGLII--FSSSGKLFEY 57
Query: 67 ---NDNIHPLVKAY---SHARINELNQQH--NDLLRQLDE-EKEQQNMLKQM 109
+ ++ +++ Y S ARI E + QH ++ R +E EK Q N+ + M
Sbjct: 58 SSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMM 109
>gi|357130474|ref|XP_003566873.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Brachypodium
distachyon]
Length = 200
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSV 52
GK + R +IEM I N R +TFSKR SG +KK SE+ AI LC V
Sbjct: 6 GKSSTGRHRIEMSPIANRSSRQVTFSKRRSGFFKKGSEL--AI-LCGARV 52
>gi|257449887|gb|ACV53813.1| MADS-box protein [Gerbera hybrid cultivar]
Length = 231
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 46
>gi|350399545|ref|XP_003485560.1| PREDICTED: hypothetical protein LOC100740572 [Bombus impatiens]
Length = 603
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 368 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 406
>gi|291396240|ref|XP_002714733.1| PREDICTED: serum response factor (c-fos serum response
element-binding transcription factor), partial
[Oryctolagus cuniculus]
Length = 504
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 135 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 194
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 195 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 254
Query: 100 KEQQNMLKQMRRV 112
E ++ LK + V
Sbjct: 255 GETKDTLKPVFTV 267
>gi|334188566|ref|NP_001190593.1| protein agamous-like 42 [Arabidopsis thaliana]
gi|227202618|dbj|BAH56782.1| AT5G62165 [Arabidopsis thaliana]
gi|332010192|gb|AED97575.1| protein agamous-like 42 [Arabidopsis thaliana]
Length = 196
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIEMKKIEN R +TFSKR +G+ KKA +E LC + I G + + +
Sbjct: 3 RGKIEMKKIENATSRQVTFSKRRNGLLKKA---YELSVLCDAQLSLIIFSQRGRLYEFSS 59
Query: 68 DNIHPLVKAY-----SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
++ ++ Y H N +Q H L+Q E +M+ ++ ++ + +
Sbjct: 60 SDMQKTIERYRKYTKDHETSNHDSQIHLQQLKQ-----EASHMITKIELLEFHKRKLLGQ 114
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINEK 153
+ +L+EL ++DS + Q L K+ E+
Sbjct: 115 GIASCSLEELQEIDSQL----QRSLGKVRER 141
>gi|45549323|gb|AAS67610.1| agamous MADS-box transcription factor 1a [Crocus sativus]
Length = 226
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ + Y A ++E N Q+ ++E +L+Q+ +++ +
Sbjct: 60 NSVKGTIDRYKKACTDTSNSGTVSEANSQY--------YQQEASKLLQQIAQLQNSNRNL 111
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ ++ +EL Q++ ++ AK NE
Sbjct: 112 MGESLSTMSPRELRQLEGKLEKGINKIRAKKNE 144
>gi|162462875|ref|NP_001105130.1| MADS-box protein ZMM17 [Zea mays]
gi|27151620|sp|Q8VWM8.1|M17_MAIZE RecName: Full=MADS-box protein ZMM17
gi|18076209|emb|CAC81053.1| putative MADS-domain transcription factor [Zea mays]
gi|194699904|gb|ACF84036.1| unknown [Zea mays]
gi|223974125|gb|ACN31250.1| unknown [Zea mays]
Length = 259
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR G+ KKA+E+ A+ LC V + G M + +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGLLKKANEL--AV-LCDARVGVVIFSSTGKMFEYCS 59
Query: 68 D--NIHPLVKAYSHA---RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
++ L++ Y HA E+N LL + E + + +RR
Sbjct: 60 PACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRR 108
>gi|3114586|gb|AAC78283.1| MADS box protein [Eucalyptus grandis]
Length = 208
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 12/105 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN ++R +T+SKR +G+ KKA EI LC V I G S
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGLIKKAKEISV---LCDAQVSVI---IFGSS----G 52
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+H + + + ++ L+Q H ++L + K Q+N+ ++ R+K
Sbjct: 53 KMHEYCSSNT-SLVDILDQYHTQCGKRLWDAK-QENLSNELDRIK 95
>gi|302398899|gb|ADL36744.1| MADS domain class transcription factor [Malus x domestica]
Length = 238
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIEMK+IEN R +TFSKR +G+ KKA +E LC V I
Sbjct: 3 RGKIEMKRIENATSRQVTFSKRRNGLLKKA---YELSVLCDAEVAVI 46
>gi|297811487|ref|XP_002873627.1| hypothetical protein ARALYDRAFT_488202 [Arabidopsis lyrata subsp.
lyrata]
gi|297319464|gb|EFH49886.1| hypothetical protein ARALYDRAFT_488202 [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN + R +TFSKR SG+ KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRSGLLKKAHELSV---LCDAEVAVIV 47
>gi|66270043|gb|AAY43353.1| flowering locus C [Arabidopsis thaliana]
Length = 118
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
DN+ ++ Y +QH D L+ LD + + N
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALN 89
>gi|5825625|gb|AAD53326.1|AF180365_1 DEFICIENS homolog DEF2 [Hieracium piloselloides]
Length = 228
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 46
>gi|358345520|ref|XP_003636825.1| MADS-box transcription factor [Medicago truncatula]
gi|358348889|ref|XP_003638474.1| MADS-box transcription factor [Medicago truncatula]
gi|355502760|gb|AES83963.1| MADS-box transcription factor [Medicago truncatula]
gi|355504409|gb|AES85612.1| MADS-box transcription factor [Medicago truncatula]
Length = 318
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+++KKIEN +R +TFSKR +G+ KKA +E LC V I G + L +
Sbjct: 3 RVKLQIKKIENITNRQVTFSKRRNGLIKKA---YELSVLCDVDVGLIMFSPSGRATLFSG 59
Query: 69 N--IHPLVKAYSHARINELNQQHND-----LLRQLDEEKEQ 102
N I +++ Y + +E + HN +LR+L E +Q
Sbjct: 60 NRSIEEILERYINLPDSERGRMHNQEHIRKVLRKLKAETDQ 100
>gi|116078103|dbj|BAF34915.1| MADS-box protein [Citrus unshiu]
Length = 211
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW------EAIHLCQPSVKA 54
R K+EMK+IEN +R +TFSKR +G++KKA E+ +I +C + KA
Sbjct: 3 RGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKA 54
>gi|332025655|gb|EGI65817.1| Serum response factor-like protein [Acromyrmex echinatior]
Length = 301
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 33 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 71
>gi|417062|sp|Q03378.1|GLOB_ANTMA RecName: Full=Floral homeotic protein GLOBOSA
gi|16024|emb|CAA48725.1| globosa [Antirrhinum majus]
gi|288558696|dbj|BAI68390.1| GLOBOSA protein [Antirrhinum majus]
Length = 215
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDAHVSVII--FASSGKMH 55
>gi|356499925|ref|XP_003518786.1| PREDICTED: MADS-box protein CMB1-like [Glycine max]
Length = 244
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI--ANRFLGMSQLH 66
R K+E+K+IEN+ +R +TF+KR +G+ KKA +E LC V I +NR
Sbjct: 3 RGKVELKRIENKINRQVTFAKRRNGLLKKA---YELSVLCDAEVALIIFSNRGKLYEFCS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV---KETQPRWWETP 123
++ ++ Y L QH +++ ++ Q LK RV ++TQ
Sbjct: 60 GHSMAKTLERYHRCSYGALEVQHQP---EIETQRRYQEYLKLKSRVEALQQTQRNLLGEE 116
Query: 124 VDELNLQELLQMDSAVD 140
++ L++++L Q++ +D
Sbjct: 117 LEHLDVKDLEQLERQLD 133
>gi|29165425|gb|AAO65316.1| MADS affecting flowering 4 variant II [Arabidopsis thaliana]
Length = 136
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+K+E+K+IEN+ R +TF KR +G+ +KA ++ LC+ SV I R S
Sbjct: 3 RRKVEIKRIENKSSRQVTFCKRRNGLMEKARQLS---ILCESSVALIIISATGRLYSFS- 58
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
D++ ++ Y EL Q D L+ LD E++ N L ++ Q + E
Sbjct: 59 -SGDSMAKILSRY------ELEQA--DDLKTLDLEEKTLNYLSHKELLETIQCKIEEAKS 109
Query: 125 DELNLQEL 132
D +++ L
Sbjct: 110 DNVSIDCL 117
>gi|432906450|ref|XP_004077538.1| PREDICTED: serum response factor-like [Oryzias latipes]
Length = 588
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 176 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 214
>gi|6707088|gb|AAF25590.1| apetala3 [Arabidopsis lyrata]
Length = 231
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+S R +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSMRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTVSDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>gi|410040857|ref|XP_518487.4| PREDICTED: serum response factor isoform 2 [Pan troglodytes]
Length = 531
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 175
>gi|148913109|gb|ABR18734.1| MADS-box transcription factor HAM2 [Helianthus annuus]
Length = 239
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 46
>gi|144678955|gb|ABP01803.1| MADS transcription factor AP3-2 [Aquilegia vulgaris]
Length = 226
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V + G ++H +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRAGIVKKAKEL---TVLCDAEVSLLMVSSTG--KMH-E 56
Query: 69 NIHP------LVKAYSHARINELNQQHNDLLRQ-LDEEKEQQNMLKQMRRVKETQPRWWE 121
I P L Y A + L Q H + ++ L + KE N L+ KE + R E
Sbjct: 57 YISPSCTHKNLYDRYQQASGSNLWQPHYERMQDTLQKLKEVNNKLR-----KEIRQRNGE 111
Query: 122 TPVDELNLQEL 132
+DEL+ Q+L
Sbjct: 112 -DLDELSFQQL 121
>gi|343887324|dbj|BAK61870.1| MADS-box protein (CitMADS8) [Citrus unshiu]
Length = 211
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW------EAIHLCQPSVKA 54
R K+EMK+IEN +R +TFSKR +G++KKA E+ +I +C + KA
Sbjct: 3 RGKMEMKRIENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKA 54
>gi|226088589|dbj|BAH37039.1| MADS-box transcription factor PI-like [Ranunculus sceleratus]
Length = 184
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 15 KKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHNDNIHPL 73
K+IEN +R +TFSKR +GI KKA EI AI LC+ V + F S++ N HPL
Sbjct: 1 KRIENSTNRQVTFSKRRNGILKKAKEI--AI-LCEAKVSLVI--FTSNSKMFEFNSHPL 54
>gi|195489598|ref|XP_002092803.1| GE14398 [Drosophila yakuba]
gi|194178904|gb|EDW92515.1| GE14398 [Drosophila yakuba]
Length = 453
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 163 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 201
>gi|602902|emb|CAA56656.1| SLM2 [Silene latifolia subsp. alba]
Length = 213
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI KKA EI LC+ V I
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIIKKAGEITV---LCEAKVSLI 46
>gi|5825623|gb|AAD53325.1|AF180364_1 DEFICIENS homolog DEF1 [Hieracium piloselloides]
Length = 224
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 46
>gi|195381433|ref|XP_002049453.1| GJ21595 [Drosophila virilis]
gi|194144250|gb|EDW60646.1| GJ21595 [Drosophila virilis]
Length = 468
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 180 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 218
>gi|194756786|ref|XP_001960656.1| GF11392 [Drosophila ananassae]
gi|190621954|gb|EDV37478.1| GF11392 [Drosophila ananassae]
Length = 473
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 168 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 206
>gi|106879569|emb|CAJ38368.1| MADS-box transcription factor [Plantago major]
Length = 221
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +M++IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMRRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALIIFSPRGKLYEFAS 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDE--EKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y + I EL Q N L Q + + E +L+++ +++ + + +
Sbjct: 60 SSLQDTIERY-QSHIKEL-QAENPPLEQNTQQLQYETAGLLRKIEQLEAAKRKLLGEGIG 117
Query: 126 ELNLQELLQMDSAVD-----------DLHQTFLAKINEKTAAAAA 159
+L+EL Q+++ ++ L++ + ++ EKT A AA
Sbjct: 118 ACSLEELQQLETQLERSVTSIRTRKTQLYKQQIEQLKEKTKALAA 162
>gi|45549325|gb|AAS67611.1| agamous MADS-box transcription factor 1b [Crocus sativus]
Length = 228
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ + Y A ++E N Q+ ++E +L+Q+ +++ +
Sbjct: 60 NSVKGTIDRYKKACTDTSNSGTVSEANSQY--------YQQEASKLLQQIAQLQNSNRNL 111
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ ++ +EL Q++ ++ AK NE
Sbjct: 112 MGESLSTMSPRELRQLEGKLEKGINKIRAKKNE 144
>gi|399950175|gb|AFP65772.1| AG-like protein [Iris fulva]
Length = 219
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN+ +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENKTNRQVTFCKRRNGLLKKA---YELSVLCDAEVGLIVFSSYGRLYEYSN 59
Query: 68 DNIHPLVKAY 77
++I ++ Y
Sbjct: 60 NSITTTIERY 69
>gi|375155240|gb|AFA37970.1| SVP4 [Actinidia chinensis]
Length = 215
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
RQ+I++KKI+N R +TFSKR G++KKA E+ LC + I F +L
Sbjct: 3 RQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELS---TLCDAEIALIV--FSATGRLFE- 56
Query: 69 NIHPLVKAYSHARINELNQQHN 90
YS + +N++ ++HN
Sbjct: 57 --------YSSSSMNQVIERHN 70
>gi|242059449|ref|XP_002458870.1| hypothetical protein SORBIDRAFT_03g041860 [Sorghum bicolor]
gi|241930845|gb|EES03990.1| hypothetical protein SORBIDRAFT_03g041860 [Sorghum bicolor]
Length = 212
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 22/143 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + F +L++
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGILKKAREISV---LCDAEVGVVI--FSSAGKLYDY 57
Query: 68 ----DNIHPLVKAYSHARINE----LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPR 118
+ PL K + N +++H L ++D +KE M ++R +K
Sbjct: 58 CSPKTSCVPLSKILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDTMQIELRHLKGED-- 115
Query: 119 WWETPVDELNLQELLQMDSAVDD 141
++ L ++L+ ++ A+D+
Sbjct: 116 -----LNSLQPKDLIMIEEALDN 133
>gi|66270028|gb|AAY43348.1| flowering locus C [Arabidopsis thaliana]
Length = 101
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
DN+ ++ Y +QH D L+ LD + + N
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALN 89
>gi|32452882|emb|CAC86183.1| MADS box protein [Malus x domestica]
Length = 271
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
R K++MK+IEN+ R +TFSKR SG+ KKA EI LC V I +G
Sbjct: 3 RGKVQMKRIENKISRQVTFSKRRSGLLKKAHEIS---VLCDAEVAVIVFSTVG 52
>gi|82734199|emb|CAJ44133.1| globosa protein [Misopates orontium]
Length = 215
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDAHVSVII--FASSGKMH 55
>gi|357134303|ref|XP_003568757.1| PREDICTED: MADS-box transcription factor 58-like [Brachypodium
distachyon]
Length = 267
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 38 RGRIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 94
Query: 68 DNIHPLVKAYSHA--------RINELNQQH 89
+++ ++ Y A + E+N QH
Sbjct: 95 NSVKATIERYKKATSDTSNTGTVAEINAQH 124
>gi|24762606|ref|NP_726438.1| blistered, isoform A [Drosophila melanogaster]
gi|71153173|sp|Q24535.2|SRF_DROME RecName: Full=Serum response factor homolog; Short=dSRF; AltName:
Full=Protein blistered
gi|7291774|gb|AAF47195.1| blistered, isoform A [Drosophila melanogaster]
gi|20152079|gb|AAM11399.1| RE17834p [Drosophila melanogaster]
gi|220957352|gb|ACL91219.1| bs-PA [synthetic construct]
Length = 449
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|418203668|dbj|BAM66580.1| FLOWERING LOCUS C, partial [Brassica rapa subsp. pekinensis]
gi|418203670|dbj|BAM66581.1| FLOWERING LOCUS C, partial [Brassica rapa subsp. pekinensis]
Length = 115
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G +L+N
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASG--KLYNF 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLD 97
DN+ ++ Y +QH D L+ LD
Sbjct: 58 SAGDNLVKILDRY--------GKQHADDLKALD 82
>gi|284178638|gb|ADB81901.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 415
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+I ++ +++ ++E N+ D++ + + + K R+++
Sbjct: 60 CSIEEVIARFANLPMHERNKSFEDMMTRFANNQMYHDRSKYTRKIE 105
>gi|195586368|ref|XP_002082946.1| GD11852 [Drosophila simulans]
gi|194194955|gb|EDX08531.1| GD11852 [Drosophila simulans]
Length = 449
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|195353097|ref|XP_002043042.1| GM11854 [Drosophila sechellia]
gi|194127130|gb|EDW49173.1| GM11854 [Drosophila sechellia]
Length = 449
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|198461347|ref|XP_001361991.2| GA17433 [Drosophila pseudoobscura pseudoobscura]
gi|198137317|gb|EAL26570.2| GA17433 [Drosophila pseudoobscura pseudoobscura]
Length = 479
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 173 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 211
>gi|453587|emb|CAA54670.1| serum response factor homolog [Drosophila melanogaster]
Length = 450
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|27804373|gb|AAO22988.1| MADS-box transcription factor CDM19 [Chrysanthemum x morifolium]
Length = 232
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 2 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 45
>gi|1561782|gb|AAB08877.1| homeotic protein boi1AP3 [Brassica oleracea var. italica]
Length = 232
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLHEF 57
Query: 67 ---NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N ++ Y ++ H + +++ ++ +L+ R+++ +
Sbjct: 58 ISPNTTTKEIIDLYQTVSDVDVWSAHYERMQET-----KRKLLETNRKLRTQIKQRLGEC 112
Query: 124 VDELNLQELLQMDSAVDD 141
+DEL++QEL ++ +++
Sbjct: 113 LDELDIQELRSLEEEMEN 130
>gi|87133584|gb|ABD24434.1| APETALA3-3 [Brassica napus]
Length = 232
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLHEF 57
Query: 67 ---NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N ++ Y ++ H + +++ ++ +L+ R+++ +
Sbjct: 58 ISPNTTTKEIIDLYQTVSDVDVWSAHYERMQET-----KRKLLETNRKLRTQIKQRLGEC 112
Query: 124 VDELNLQELLQMDSAVDD 141
+DEL++QEL ++ +++
Sbjct: 113 LDELDIQELRSLEEEMEN 130
>gi|30172221|dbj|BAC75970.1| MADS-box transcription factor [Tulipa gesneriana]
Length = 228
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA+E+ LC V +
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRSGIMKKANEL---TVLCDAEVSLL 46
>gi|152143638|gb|ABS29556.1| PISTILLATA-like MADS box protein [Melaleuca quinquenervia]
Length = 208
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R ++E+K+IEN ++R +T+SKR +G+ KKA EI LC V I F ++H
Sbjct: 3 RGRLELKRIENSNNRQVTYSKRRNGLIKKAKEISV---LCDAQVSLII--FGSSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
N ++ ++ Y L + +H +L +LD +KE N+ Q+R +K
Sbjct: 58 CSSNTSLVDILDQYQTQCGKRLWDAKHENLSNELDRIKKENDNLQIQLRHLK-------G 110
Query: 122 TPVDELNLQELLQMDSAVDD 141
V LN +EL+ ++ +++
Sbjct: 111 EDVTSLNHRELIILEDTLEN 130
>gi|291241116|ref|XP_002740462.1| PREDICTED: serum response factor (c-fos serum response
element-binding transcription factor)-like [Saccoglossus
kowalevskii]
Length = 465
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 97 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 135
>gi|239047968|ref|NP_001141627.2| putative MADS-box transcription factor family protein [Zea mays]
gi|238908832|gb|ACF86747.2| unknown [Zea mays]
gi|413954328|gb|AFW86977.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 223
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIH 46
G+ ++ RQ+IE++ IE+ +TFSKR SG+ KKASE++ +
Sbjct: 38 GRPSRGRQRIEIRHIEDGGRLQVTFSKRKSGLQKKASELFLLCGSPVAIVIFSPGKKVFA 97
Query: 47 LCQPSVKAIANRFLGM-SQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
L PSV + R+ + + D + P+++ + ++R+ +E K + M
Sbjct: 98 LGTPSVDHVLRRYAPIPGEEEEDGLLPVLQDTDDVSAITDRVEVEGIVRRTEETKARSVM 157
Query: 106 LKQM-----RRVKETQPR-----WWETPVDELNLQEL 132
K + V++T + WWE +L EL
Sbjct: 158 EKARMDAIGKTVRQTAAKAGRKFWWEADSGKLGEAEL 194
>gi|195171137|ref|XP_002026367.1| GL20046 [Drosophila persimilis]
gi|194111269|gb|EDW33312.1| GL20046 [Drosophila persimilis]
Length = 478
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 172 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 210
>gi|168043223|ref|XP_001774085.1| MIKCC MADS-domain protein PpMADS-S [Physcomitrella patens subsp.
patens]
gi|162674631|gb|EDQ61137.1| MIKCC MADS-domain protein PpMADS-S [Physcomitrella patens subsp.
patens]
Length = 296
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R KIE+KKIEN R +TFSKR G+ KKA E+ A+ LC V I G
Sbjct: 3 RGKIEIKKIENPTSRQVTFSKRRGGLLKKAHEL--AV-LCDAEVALIIFSSTGKLFEFAS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
+ ++ +++ YS + D + +E + +Q+ R++ +Q + +
Sbjct: 60 SGSMRDILERYSKCPDGVQTTGNVDFM-----GREVVKLRQQLERMQHSQRQMLGEDLQV 114
Query: 127 LNLQELLQMDSAVD 140
L + +LLQ++ +D
Sbjct: 115 LTVSDLLQLEQQLD 128
>gi|220942576|gb|ACL83831.1| bs-PA [synthetic construct]
Length = 450
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>gi|194886290|ref|XP_001976583.1| GG22961 [Drosophila erecta]
gi|190659770|gb|EDV56983.1| GG22961 [Drosophila erecta]
Length = 446
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 163 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 201
>gi|66270036|gb|AAY43350.1| flowering locus C [Arabidopsis thaliana]
Length = 112
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN 104
DN+ ++ Y +QH D L+ LD + + N
Sbjct: 60 GDNLVKILDRY--------GKQHADDLKALDHQSKALN 89
>gi|383617657|gb|AFH41826.1| MADS-box protein SOC1 [Brassica napus]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ V Y S ++E N QH + E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTVDRYLRHTKDRVSSKPVSEENMQHF--------KHEAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGEGIGSCSIEELQQIEQQLE 132
>gi|195636614|gb|ACG37775.1| MADS-box transcription factor 16 [Zea mays]
Length = 227
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRTGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSPGTDIKTIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRGLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L+ EL ++ VD
Sbjct: 112 DLDSLDFDELRGLEQNVD 129
>gi|91106158|gb|ABE11601.1| MADS-box transcription factor AP3 [Trochodendron aralioides]
Length = 225
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++ +T+SKR GI+KKASE+ LC V I
Sbjct: 3 RGKIEIKRIENSTNKQVTYSKRRKGIFKKASEL---TVLCDAKVSLI 46
>gi|399950179|gb|AFP65774.1| AG-like protein, partial [Iris fulva]
Length = 212
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK---QMRRVKETQPRWWETPV 124
++I ++ Y A + N N ++ ++ QQ + K Q++ ++ +
Sbjct: 60 NSIKSTIERYKKACAD--NSNTNAVIEINTQQYYQQEVAKLRHQIQILQNANRHLMGDSL 117
Query: 125 DELNLQELLQMDSAVD 140
LN++EL Q+++ ++
Sbjct: 118 STLNVKELKQLENRLE 133
>gi|162460614|ref|NP_001105692.1| MADS box protein [Zea mays]
gi|939781|gb|AAB00079.1| MADS box protein [Zea mays]
Length = 255
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R ++E+K+IEN+ +R +TFSKR +G+ KKA +E LC V I F G +L+
Sbjct: 3 RGRVELKRIENKINRQVTFSKRRNGLLKKA---YELSVLCDAEVALII--FSGRGKLYEF 57
Query: 67 -NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+ + ++ Y H N + ++ L +E + + ++ TQ +
Sbjct: 58 GSAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLG 117
Query: 126 ELNLQELLQMDSAVD 140
L+++EL Q++ ++
Sbjct: 118 PLSVKELQQLEKQLE 132
>gi|47209110|emb|CAF90068.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 100 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 159
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDE 98
QP + + + L + L++ + P S R++ + DL Q+ E
Sbjct: 160 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSSDQRMSATGFEETDLTYQVSE 215
>gi|410917646|ref|XP_003972297.1| PREDICTED: serum response factor-like [Takifugu rubripes]
Length = 506
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 100 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 159
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEE 99
QP + + + L + L++ + P S R++ + DL Q+ E
Sbjct: 160 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSSDQRMSATGFEETDLTYQVSES 216
>gi|27804367|gb|AAO22985.1| MADS-box transcription factor CDM115 [Chrysanthemum x morifolium]
Length = 229
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASELTV---LCDAKVSII 46
>gi|145617255|gb|ABP88100.1| MADS-box protein AGL20 [Brassica rapa subsp. chinensis]
gi|392522044|gb|AFM77892.1| MADS-box protein AGL20/SOC1 [Brassica napus]
gi|392522048|gb|AFM77894.1| MADS-box protein AGL20/SOC1 [Brassica juncea]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ V Y S ++E N QH + E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTVDRYLRHTKDRVSSKPVSEENMQHF--------KHEAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGEGIGSCSIEELQQIEQQLE 132
>gi|1049022|gb|AAB41526.1| transcription factor SaMADS A [Sinapis alba]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ V Y S ++E N QH + E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTVDRYLRHTKDRVSSKPVSEENMQHF--------KHEAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGEGIGSCSIEELQQIEQQLE 132
>gi|413949243|gb|AFW81892.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 124
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIKIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDTEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRV 112
P S +RI E Q +H +L ++D +KE NM Q+R V
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRPV 108
>gi|189214321|gb|ACD85095.1| B-class MADS-box protein AP3-3 [Dendrobium hybrid cultivar]
Length = 224
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKAKEI---TVLCDAEVSLI 46
>gi|342298430|emb|CBY05405.1| SHATTERPROOF2-like protein [Lepidium campestre]
Length = 246
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSITEANTQY--------YQQESSKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++ ++
Sbjct: 127 LGESLGSLNFKELKNLEGRLE 147
>gi|327442598|dbj|BAK18553.1| MADS-box transcription factor [Cyclamen persicum]
Length = 248
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSNRGRLYEYSN 74
Query: 68 DNIHPLVKAY-------SHARINELNQQH 89
++ ++ Y S ++ELN Q+
Sbjct: 75 SSVKATIQRYKKATSDTSAGSVSELNAQY 103
>gi|304434480|dbj|BAJ15423.1| GLOBOSA-like MADS-box protein [Torenia fournieri]
Length = 231
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDARVSVI 46
>gi|296084076|emb|CBI24464.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 14 MKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHNDNIHP 72
M++IEN R +TFSKR +G+ KKA +E LC V I G + + + N+
Sbjct: 1 MRRIENATSRQVTFSKRRNGLLKKA---YELSVLCDAEVAVIIFSQKGRLYEFSSSNMQS 57
Query: 73 LVKAY-SHARINELN----QQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
++ Y HA+ E N +Q+ L+Q + ++M K++ ++ +Q + +
Sbjct: 58 AIERYREHAKQVETNNPELEQYMQNLKQ-----DAESMAKKIELLEVSQRKLLGQGLSSC 112
Query: 128 NLQELLQMDSAVD 140
+L E+L++DS ++
Sbjct: 113 SLDEILEIDSQLE 125
>gi|110798207|gb|ABG90943.1| PI2 [Streptochaeta angustifolia]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGILKKAREISV---LCDAQVGVVV 47
>gi|363903280|gb|AEW43604.1| MADS-box transcription factor NMH7 [Pisum sativum]
Length = 233
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +T+SKR +G++KKA+E+ LC V I F +LH +
Sbjct: 3 RGKIQIKRIENTTNRQVTYSKRRNGLFKKANEL---TVLCDAKVSIIM--FSSTGKLH-E 56
Query: 69 NIHPLV 74
I P V
Sbjct: 57 YISPSV 62
>gi|356545221|ref|XP_003541043.1| PREDICTED: agamous-like MADS-box protein AGL15-like [Glycine max]
Length = 276
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+I+N R +TFSKR +G++KKA E+ LC+ V I
Sbjct: 3 RGKIEIKRIDNASSRQVTFSKRRTGLFKKAQELS---ILCEAEVAVIV 47
>gi|340721075|ref|XP_003398951.1| PREDICTED: serum response factor homolog isoform 2 [Bombus
terrestris]
Length = 378
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 125 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 163
>gi|300810973|gb|ADK35760.1| agamous-like protein 2 [Hosta plantaginea]
Length = 225
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 60 NSVKATIERYKKA 72
>gi|284178628|gb|ADB81896.1| MIKC* MADS-box transcription factor [Sphagnum subsecundum]
Length = 364
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR SG+ KKA +E LC V I G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRSGLIKKA---YELSVLCDIDVGLIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQL 96
+I ++ +++ ++E N++ + + L
Sbjct: 60 CSIEDVIARFANLPLHERNKRKTENMEYL 88
>gi|162459975|ref|NP_001104951.1| silky1 [Zea mays]
gi|7328575|gb|AAF59838.1|AF181479_1 MADS-box DNA binding protein [Zea mays]
gi|194701818|gb|ACF84993.1| unknown [Zea mays]
gi|195637774|gb|ACG38355.1| MADS-box transcription factor 16 [Zea mays]
gi|413943152|gb|AFW75801.1| silky1 [Zea mays]
Length = 227
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRTGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSPGTDIKTIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRGLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L+ EL ++ VD
Sbjct: 112 DLDSLDFDELRGLEQNVD 129
>gi|291278194|gb|ADD91578.1| SEEDSTICK-like protein [Prunus serrulata var. lannesiana]
Length = 222
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSILCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQ 116
N++I ++ Y A I E+N Q+ ++E + +Q++ ++ +
Sbjct: 58 SNNNSIRNTIERYKKACSDSSGSTSITEINAQY--------YQQESAKLRQQIQMLQNSN 109
Query: 117 PRWWETPVDELNLQELLQMDSAVD 140
+ L+++EL Q+++ ++
Sbjct: 110 RHLMGDALSTLSVKELKQLENRLE 133
>gi|288973224|gb|ADC79708.1| APETALA3-like protein [Pachysandra terminalis]
Length = 226
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENTTNRQVTYSKRRNGIFKKAKELSV---LCDAKVSII 46
>gi|392522046|gb|AFM77893.1| MADS-box protein AGL20/SOC1 [Brassica juncea]
Length = 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ V Y S ++E N QH + E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTVDRYLRHTKDRVSSKPVSEENMQHF--------KHEAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGEGIGSCSIEELQQIEQQLE 132
>gi|290767553|gb|ADD60473.1| AP3-related protein 4 [Dendrobium moniliforme]
Length = 224
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKAKEITV---LCDAEVSLI 46
>gi|183014291|dbj|BAG24493.1| GLOBOSA-like MADS-box protein [Torenia fournieri]
Length = 230
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDARVSVI 46
>gi|189214329|gb|ACD85099.1| B-class MADS-box protein AP3-3 [Galeola falconeri]
Length = 226
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGIMKKAREL---TVLCDAEVSLIT 47
>gi|284799139|gb|ADB93926.1| SEEDSTICK-like protein [Prunus serrulata var. lannesiana]
Length = 222
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSILCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQ 116
N++I ++ Y A I E+N Q+ ++E + +Q++ ++ +
Sbjct: 58 SNNNSIRNTIERYKKACSDSSGSTSITEINAQY--------YQQESAKLRQQIQMLQNSN 109
Query: 117 PRWWETPVDELNLQELLQMDSAVD 140
+ L+++EL Q+++ ++
Sbjct: 110 RHLMGDALSTLSVKELKQLENRLE 133
>gi|413939000|gb|AFW73551.1| putative MADS-box transcription factor family protein, partial [Zea
mays]
Length = 166
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAQELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ Y+ N +LN +H+ ++ E L+QMR
Sbjct: 60 SSMNEIIDKYNTHSKNLGKTEQPSLDLNLEHSKYANLNEQLAEASLRLRQMR-------- 111
Query: 119 WWETPVDELNLQELLQMDSAVDD-LH-------QTFLAKINE 152
++ LN++EL Q++ ++ LH Q FL +IN+
Sbjct: 112 --GEELEGLNVEELQQLEKNLESGLHRVLQTKDQQFLEQIND 151
>gi|116309872|emb|CAH66909.1| OSIGBa0126B18.2 [Oryza sativa Indica Group]
Length = 235
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+KKIEN +R +TFSKR G+ KKA+E+ AI LC + I F G +++
Sbjct: 3 RGRVELKKIENPTNRQVTFSKRRMGLLKKANEL--AI-LCDAQIGVIV--FSGTGKMYEY 57
Query: 69 NIHP---------LVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
+ P +KA S R E++ Q +++++ K++ N L+ + R
Sbjct: 58 SSPPWRIANIFDRYLKAPS-TRFEEMDVQQR-IIQEMTRMKDENNRLRIIMR 107
>gi|392522050|gb|AFM77895.1| MADS-box protein AGL20/SOC1 [Brassica juncea]
Length = 213
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ V Y S ++E N QH + E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTVDRYLRHTKDRVSSKPVSEENMQHF--------KHEAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGDGIGSCSIEELQQIEQQLE 132
>gi|52789958|gb|AAU87582.1| MADS9 protein [Gossypium hirsutum]
Length = 254
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN + R +TFSKR +G+ KKA E+ AI LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRAGLLKKAKEL--AI-LCDAEVAVI 46
>gi|356614844|gb|AET25527.1| APETALA1-like MADS-box protein [Narcissus tazetta var. chinensis]
Length = 253
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +++MK+IEN+ +R +TFSKR SG+ KKA EI LC V I G + +
Sbjct: 3 RGRVQMKRIENKINRQVTFSKRRSGLLKKAHEI---SVLCDAEVALIVFSAKGKLCEYST 59
Query: 68 D-NIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
D N+ +++ Y E DL Q + E + + ++++Q +D
Sbjct: 60 DSNMEKILERYERYSYAERALTLTDLQSQGNWVVEFNKLKAKTENLQKSQRHLMGEQLDS 119
Query: 127 LNLQELLQMDSAVDD 141
LNL+++ Q++ ++
Sbjct: 120 LNLKQIGQLEQQLES 134
>gi|222629540|gb|EEE61672.1| hypothetical protein OsJ_16140 [Oryza sativa Japonica Group]
Length = 249
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+KKIEN +R +TFSKR G+ KKA+E+ AI LC + I F G +++
Sbjct: 3 RGRVELKKIENPTNRQVTFSKRRMGLLKKANEL--AI-LCDAQIGVIV--FSGTGKMYEY 57
Query: 69 NIHP---------LVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
+ P +KA S R E++ Q +++++ K++ N L+ + R
Sbjct: 58 SSPPWRIANIFDRYLKAPS-TRFEEMDVQQR-IIQEMTRMKDENNRLRIIMR 107
>gi|364506601|gb|AEW50207.1| PI [Acca sellowiana]
Length = 208
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN ++R +T+SKR +G+ KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSNNRQVTYSKRRNGLIKKAKEISV---LCDAQVSVII--FGSSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL--NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
N ++ ++ Y H + + + +H +L +LD +KE N+ ++R +K
Sbjct: 58 CSSNTSLVDILDQY-HTQCGKRLWDAKHENLSNELDRIKKENDNLQIRLRHLK 109
>gi|29825728|gb|AAO92341.1| MADS20 [Oryza sativa Japonica Group]
Length = 233
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+++++IENE R +TFSKR G+ KKA EI A+ LC V AI G + H
Sbjct: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEI--AV-LCDVDVAAIVFSAKG-NLFHYA 58
Query: 69 NIHP----LVKAYSHARINELNQQHNDLLRQLDE-----EKEQQNMLKQMRRVKETQPRW 119
+ H +++ Y +EL + N+++ + E + + ++ +K++Q
Sbjct: 59 SSHTTMERILEKYDR---HELLSEGNNVIEEFPELEGSMRYDHIKLRGKIEALKKSQRNL 115
Query: 120 WETPVDELNLQELLQMDSAVD 140
+D L LQ++ Q++ +D
Sbjct: 116 MGQELDSLTLQDIQQLEDQID 136
>gi|238012662|gb|ACR37366.1| unknown [Zea mays]
gi|413949242|gb|AFW81891.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 152
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +TFSKR +G+ KKA EI LC V + F +L+ D
Sbjct: 3 RGKIKIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCDTEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSP---RTSLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLK 109
>gi|116786076|gb|ABK23963.1| unknown [Picea sitchensis]
Length = 124
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN- 67
R+KIE+K+I N R +TFSKR G++KKA E+ LC V I F +LH+
Sbjct: 3 REKIELKRIANASARQVTFSKRRKGLFKKAEELS---ILCAADVALIV--FSSTGKLHDY 57
Query: 68 ---DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQN--MLKQMRRVKETQPRWWE 121
N+H K +N+L Q L L+ + Q++ M+K++ +++ R E
Sbjct: 58 SSSRNMHG--KELEGLSLNDLQQLEEQLKMGLNCVRLQKDEYMVKEINELQDKGRRITE 114
>gi|887575|emb|CAA61484.1| MADS box regulatory protein [Rumex acetosa]
gi|1046272|gb|AAA80304.1| MADS box regulatory protein [Rumex acetosa]
Length = 220
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KI++K+IEN+ +R +T+SKR SG++KKA E+ LC V I ++LH
Sbjct: 3 RGKIQIKRIENDTNRQVTYSKRRSGLFKKAKEL---TILCDAKVSIIM--ISNTNKLHEF 57
Query: 67 ---NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
N + AY +L H + E+E +N+ + R++++ R
Sbjct: 58 ISPNITTKQVYDAYQTTFSPDLWTSHYAKM-----EQELRNLNEVNRQIRKEIRRRMGCC 112
Query: 124 VDELNLQELL----QMDSAVDDL 142
+++++ QEL+ M++AV +L
Sbjct: 113 LEDMSYQELVFLQQDMENAVTNL 135
>gi|162461817|ref|NP_001105378.1| Zea AGAMOUS homolog2 [Zea mays]
gi|951172|gb|AAA85870.1| MADS box protein [Zea mays]
gi|1001934|emb|CAA56504.1| ZAG2 [Zea mays]
gi|195625578|gb|ACG34619.1| MADS-box transcription factor 13 [Zea mays]
gi|195626326|gb|ACG34993.1| MADS-box transcription factor 13 [Zea mays]
Length = 268
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENNTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQ-----QHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+++ V+ Y A + +HN Q ++E + Q++ ++ T
Sbjct: 60 NSVKATVERYKKAHTVGSSSGPPLLEHNA---QQFYQQESAKLRNQIQMLQNTNRHLVGD 116
Query: 123 PVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ +E AA
Sbjct: 117 SVGNLSLKELKQLESRLEKGISKIRARKSELLAA 150
>gi|8745072|emb|CAB95649.1| MADS box protein [Betula pendula]
Length = 242
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I F +L+
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIV--FSSRGRLYEY 72
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
N ++ ++ Y A N ++E + Q+R V+ + +
Sbjct: 73 ANNSSVKTTIERYKKACAESSNSGSVSEANTQFYQQEAAKLRGQIRSVQNSNRHLLGEAL 132
Query: 125 DELNLQELLQMD 136
ELN +EL ++
Sbjct: 133 SELNFKELKNLE 144
>gi|307177604|gb|EFN66679.1| Serum response factor-like protein [Camponotus floridanus]
Length = 285
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 31 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 69
>gi|305862064|gb|ADM72972.1| PISTILLATA-like protein 5 [Platanus x acerifolia]
Length = 146
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVSLIIFSSSGKMSEYHS 59
Query: 68 DNI 70
+I
Sbjct: 60 PSI 62
>gi|260942511|ref|XP_002615554.1| hypothetical protein CLUG_04436 [Clavispora lusitaniae ATCC
42720]
gi|238850844|gb|EEQ40308.1| hypothetical protein CLUG_04436 [Clavispora lusitaniae ATCC
42720]
Length = 238
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK+ K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 44 GGKQQKERRKIEIKFIQDKSRRHITFSKRKAGIMKKAYEL 83
>gi|110798213|gb|ABG90946.1| PI1 [Streptochaeta angustifolia]
Length = 208
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGILKKAREISV---LCDAEVGVVV--FSSAGKLY-D 56
Query: 69 NIHP---LVKAYSHARINE----LNQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
P L K + N +++H L ++D +KE NM ++R +K
Sbjct: 57 YCSPKTTLPKILEKYQANSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLK 109
>gi|34452087|gb|AAQ72500.1| MADS-box protein 15 [Petunia x hybrida]
Length = 205
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K I++++ R +TFSKR G+ KKA E+ LC V + F +L+
Sbjct: 3 RKKVEIKLIQDKNSRQVTFSKRRKGLIKKAKELS---ILCDADVAVVV--FSNRGRLYDF 57
Query: 67 --NDNIHPLVKAY-SHARIN-ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
N+++ +V+ Y SH E++ + + D E+ + + + + +T R E
Sbjct: 58 SSNNSLTEIVQRYHSHVEAEKEISAEAS------DAEQSKYASIMTIGEMLQTIQRQLEE 111
Query: 123 P-VDELNLQELLQMDSAV 139
P VD+LN+ +L+ +++ +
Sbjct: 112 PDVDDLNVTDLVHLENQI 129
>gi|115476540|ref|NP_001061866.1| Os08g0431900 [Oryza sativa Japonica Group]
gi|75292652|sp|Q6VAM4.1|MAD23_ORYSJ RecName: Full=MADS-box transcription factor 23; AltName:
Full=OsMADS23
gi|33621115|gb|AAQ23141.1| transcription factor MADS23 [Oryza sativa Japonica Group]
gi|113623835|dbj|BAF23780.1| Os08g0431900 [Oryza sativa Japonica Group]
Length = 159
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN 67
R KIE+K+I+N R +TFSKR SG++KKA E+ +I LC V + F S+L++
Sbjct: 3 RGKIEIKRIDNATSRQVTFSKRRSGLFKKAREL--SI-LCDAEVGLLV--FSSTSRLYD 56
>gi|19698538|gb|AAL93197.1|AF486649_1 AGAMOUS-like protein 2 HvAG2 [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 3 RGRIEIKRIENTTNRQLTFCKRRNGLLKKA---YELSVLCDAEVALVVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQH 89
+++ ++ Y S + E+N QH
Sbjct: 60 NSVKATIERYKKATSDTSSAGTVAEINAQH 89
>gi|4218171|emb|CAA08803.1| MADS-box protein, GDEF2 [Gerbera hybrid cultivar]
Length = 228
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN +R +T+SKR +G++KKASE+ LC V I
Sbjct: 3 RGKIQIKKIENSTNRQVTYSKRRNGLFKKASEL---TVLCDAKVSII 46
>gi|449464022|ref|XP_004149728.1| PREDICTED: agamous-like MADS-box protein AGL15-like [Cucumis
sativus]
Length = 246
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN + R +TFSKR +G+ KKA E+ AI LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRAGLLKKAQEL--AI-LCDAEVAVI 46
>gi|195124855|ref|XP_002006899.1| GI21322 [Drosophila mojavensis]
gi|193911967|gb|EDW10834.1| GI21322 [Drosophila mojavensis]
Length = 464
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 174 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 212
>gi|146399991|gb|ABQ28694.1| MADS box transcription factor [Narcissus tazetta var. chinensis]
Length = 230
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y + A ++E N Q+ ++E + +Q+ ++ +
Sbjct: 60 NSVKATIERYKKACTDTSNTATVSEANSQY--------YQQEASKLRQQITNLQNSNRNL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ ++L++L Q++S ++
Sbjct: 112 MGESLSTMSLRDLKQLESRLE 132
>gi|154551049|gb|ABS83558.1| APETALA1-like protein [Alpinia oblongifolia]
Length = 247
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R ++++K+IEN+ +R +TFSKR SG+ KKA EI LC V I F +L+
Sbjct: 3 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEI---SVLCDAEVAVII--FSSKGKLYEY 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
+ ++ +++ Y E ++L Q + E + +M + ++Q +
Sbjct: 58 STDSSMEKILERYEQYCYAEKALISSELDCQENWHHEYGKLKAKMEALSKSQRHLMGEQL 117
Query: 125 DELNLQELLQMDSAVDD 141
D L+L+EL Q+++ +D+
Sbjct: 118 DTLSLKELQQLENQLDN 134
>gi|154720969|gb|ABS84660.1| SOC1-like protein 2 [Citrus sinensis]
Length = 212
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI+MKKIEN+ R +TFSKR +G+ KKA +E LC V I
Sbjct: 3 RGKIQMKKIENDTSRQVTFSKRRNGMLKKA---YELSVLCDAEVAVI 46
>gi|110006237|gb|ABG48621.1| TM6 [Solanum lycopersicum]
Length = 60
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI+KKA E+ LC + I
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRNGIFKKAKELTV---LCDAKISLI 46
>gi|410900516|ref|XP_003963742.1| PREDICTED: serum response factor-like [Takifugu rubripes]
Length = 448
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 86 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 124
>gi|168001060|ref|XP_001753233.1| MIKC MADS--domain protein PPMA8 [Physcomitrella patens subsp.
patens]
gi|162695519|gb|EDQ81862.1| MIKC MADS--domain protein PPMA8 [Physcomitrella patens subsp.
patens]
Length = 410
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + + G ++Q N
Sbjct: 3 RVKLEIKKIENPTNRQVTYSKRRNGLMKKA---YELSVLCDIDLALVMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLD 97
+I ++ +++ ++E N+ D++ +
Sbjct: 60 CSIEEVIGRFANLSMHERNKSFEDMMTRFS 89
>gi|147868419|gb|ABQ51321.1| B-class MADS-box protein TM6-1 [Carica papaya]
gi|187942346|gb|ACD39983.1| MADS2 [Carica papaya]
Length = 227
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTV---LCDAKVSLI 46
>gi|399950191|gb|AFP65780.1| GLO-like protein 3 [Iris fulva]
Length = 213
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 11 KIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHNDN 69
+IE+K+IEN +R +TFSKR +GI KKA EI LC+ V + LG MS+ + N
Sbjct: 5 RIEIKRIENSTNRQVTFSKRRNGIIKKAREISV---LCECDVSLVIFSSLGKMSEYCSPN 61
Query: 70 --IHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
+ L++ Y +L + +H +L +++ ++E NM ++R +K P +
Sbjct: 62 TKLPELLERYQQNSGKKLWDAKHENLSMEIERIKRENDNMQIELRHMKGEDLNSLH-PRE 120
Query: 126 ELNLQELLQMD-SAVDDLHQTFL 147
++++E LQ ++V D FL
Sbjct: 121 LIHIEEALQNGLTSVRDKQMEFL 143
>gi|84311251|gb|ABC55428.1| FLC-like 1 splice variant 1 [Beta vulgaris]
gi|124298194|gb|ABN04205.1| FLC-like 1 splice variant 1 [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|6840998|gb|AAF28863.1|AF120097_1 DEF/GLO-like protein [Pinus radiata]
Length = 220
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K IEN +R +TFSKR G+ KKA E+ LC V I F +LH
Sbjct: 3 RGKIEIKMIENATNRQVTFSKRRGGLKKKAQELSV---LCNAEVALII--FSSTGKLHEW 57
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE----- 121
+ + + S +I E Q+ L +D + +Q +L +MRR+ + E
Sbjct: 58 SSSSSFFMLQKSMKKILERYQKSEQGLGLMDYQHQQ--LLCEMRRITKENESLQERLRHM 115
Query: 122 --TPVDELNLQELLQMDSAVD 140
V+ L L EL +++ +D
Sbjct: 116 NGEEVNSLKLPELFKLEEQLD 136
>gi|74053663|gb|AAZ95248.1| MADS box AP3-like protein A [Dendrobium crumenatum]
Length = 228
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPST 62
Query: 52 -VKAIANRFLGMS--QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ 108
+K + R+ ++ L N + H +NE+NQ +RQ E+ + +K+
Sbjct: 63 DIKGVYERYQVVTGIDLWNAQYERMQNTLKH--LNEINQNLRKEIRQRKGEELEGMEIKE 120
Query: 109 MRRVKET 115
+R +++T
Sbjct: 121 LRGLEQT 127
>gi|226503663|ref|NP_001148502.1| DNA binding protein [Zea mays]
gi|195619852|gb|ACG31756.1| DNA binding protein [Zea mays]
Length = 212
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 48/207 (23%)
Query: 3 GKKTKR-RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------------- 41
GK+T R RQKIE+++I+N++ R +T KR G+ KKASE+
Sbjct: 5 GKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPER 64
Query: 42 --------------WEAIHLCQPSVKAIANRFL------GMSQLHNDNIHPLVKAYSHAR 81
A + PSV + +R G++ + + +A AR
Sbjct: 65 KEVPVPPRGQRDDGGLAFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEAR 124
Query: 82 INELNQQHNDLLRQLDEEKEQQNMLKQ--MRRVKETQPR-WWETPVDELNLQELLQMDSA 138
+ Q ++ EK + + + Q ++ V+ T R WWE V L EL S
Sbjct: 125 AGQTEQTRA----LVEAEKARNDAIGQKVLQAVEVTGRRFWWEVDVGVLGEAELPVFTSQ 180
Query: 139 VDDLHQTFLAKINEKTAAAAASSSVAP 165
+ L + + N+ +A + AP
Sbjct: 181 LQRLRDSVRLQANKSRTSATPAGVAAP 207
>gi|125597358|gb|EAZ37138.1| hypothetical protein OsJ_21479 [Oryza sativa Japonica Group]
Length = 190
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
G +K +QKIEM I+ ++ R +TFSKR G++KKASEI
Sbjct: 6 GGTSKGKQKIEMCCIDGKEKRQVTFSKRRRGLFKKASEI 44
>gi|63014391|gb|AAY25576.1| AG [Nuphar advena]
Length = 226
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVSLIIFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ + Y A ++E N Q+ ++E + +Q+ ++++ +
Sbjct: 60 NSVKATIDRYKKACADSSNSGTVSEANAQYY--------QQEAYKLRQQISKIQQDNRQM 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
++E+++++L ++ ++
Sbjct: 112 LGEGINEMSVRDLKTLEGKLE 132
>gi|297820960|ref|XP_002878363.1| hypothetical protein ARALYDRAFT_486583 [Arabidopsis lyrata subsp.
lyrata]
gi|297324201|gb|EFH54622.1| hypothetical protein ARALYDRAFT_486583 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN+ R +TFSKR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEVKRIENKITRQVTFSKRKSGLLKKA---YELSVLCDAEVSLIIFSNGGKLYEFSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+ ++ Y + N L+ +ND L
Sbjct: 60 VGVGRTIERYYRCKNNLLD--NNDTL 83
>gi|237701165|gb|ACR16043.1| GLOBOSA-like MADS-box transcription factor [Hypoxis villosa]
Length = 210
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR GI KKA EI LC V + LG +S+ +
Sbjct: 3 RGKIEIKRIENPTNRQVTFSKRRHGIIKKAREIS---VLCDAQVSLVIFSSLGRISEFCS 59
Query: 68 --DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
++ +++ Y +L + +H +L ++D +KE NM ++R +K
Sbjct: 60 PATSLPKILEKYQTNSGKKLWDAKHENLSMEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDD 141
++ L+ +EL+ ++ A+++
Sbjct: 113 LNSLSPKELIPIEDALEN 130
>gi|147868421|gb|ABQ51322.1| B-class MADS-box protein TM6-2 [Carica papaya]
Length = 227
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTV---LCDAKVSLI 46
>gi|84311257|gb|ABC55431.1| FLC-like 1 splice variant 4 [Beta vulgaris]
gi|124298197|gb|ABN04208.1| FLC-like 1 splice variant 4 [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|329664766|ref|NP_001192945.1| serum response factor [Bos taurus]
gi|296474481|tpg|DAA16596.1| TPA: serum response factor (c-fos serum response element-binding
transcription factor)-like [Bos taurus]
Length = 509
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 138 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 197
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 198 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 257
Query: 100 KEQQNMLK 107
E ++ LK
Sbjct: 258 GETKDTLK 265
>gi|68532805|dbj|BAE06050.1| MADS-box transcription factor [Asparagus officinalis]
Length = 225
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGIMKKAKELTV---LCDAQVSLI 46
>gi|10048414|ref|NP_065239.1| serum response factor [Mus musculus]
gi|81906791|sp|Q9JM73.1|SRF_MOUSE RecName: Full=Serum response factor; Short=SRF
gi|7209728|dbj|BAA92314.1| serum response factor [Mus musculus]
gi|30354196|gb|AAH51950.1| Serum response factor [Mus musculus]
gi|148691563|gb|EDL23510.1| serum response factor [Mus musculus]
Length = 504
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 133 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 171
>gi|172052262|gb|ACB70410.1| agamous MADS-box transcription factor [Hosta plantaginea]
Length = 225
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 60 NSVKATIERYKKA 72
>gi|4507205|ref|NP_003122.1| serum response factor [Homo sapiens]
gi|134876|sp|P11831.1|SRF_HUMAN RecName: Full=Serum response factor; Short=SRF
gi|338480|gb|AAA36647.1| serum response factor [Homo sapiens]
gi|29386997|gb|AAH48211.1| Serum response factor (c-fos serum response element-binding
transcription factor) [Homo sapiens]
gi|30851206|gb|AAH52572.1| Serum response factor (c-fos serum response element-binding
transcription factor) [Homo sapiens]
gi|119624566|gb|EAX04161.1| serum response factor (c-fos serum response element-binding
transcription factor), isoform CRA_a [Homo sapiens]
gi|119624567|gb|EAX04162.1| serum response factor (c-fos serum response element-binding
transcription factor), isoform CRA_a [Homo sapiens]
gi|208967394|dbj|BAG73711.1| serum response factor [synthetic construct]
Length = 508
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 196
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 197 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 256
Query: 100 KEQQNMLK 107
E ++ LK
Sbjct: 257 GETKDTLK 264
>gi|340721073|ref|XP_003398950.1| PREDICTED: serum response factor homolog isoform 1 [Bombus
terrestris]
Length = 595
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 368 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 406
>gi|95981896|gb|ABF57933.1| MADS-box transcription factor TaAGL31 [Triticum aestivum]
gi|95982215|gb|ABF57948.1| MADS-box transcription factor TaAGL9 [Triticum aestivum]
Length = 252
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY--SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+++ + Y +HA + ++ Q ++E + Q++ ++ T V
Sbjct: 60 NSVKATIDRYKKAHACGSTSGVPLIEVNAQQYYQQEAAKLRHQIQMLQSTNKHLVGDSVG 119
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
L+L+EL Q++S ++ A+ NE
Sbjct: 120 NLSLKELKQLESRLEKGIAKIRARKNE 146
>gi|395832392|ref|XP_003789255.1| PREDICTED: serum response factor [Otolemur garnettii]
Length = 512
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 141 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 200
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 201 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 260
Query: 100 KEQQNMLK 107
E ++ LK
Sbjct: 261 GETKDTLK 268
>gi|380029571|ref|XP_003698442.1| PREDICTED: uncharacterized protein LOC100871245 [Apis florea]
Length = 586
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 359 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 397
>gi|357117589|ref|XP_003560547.1| PREDICTED: MADS-box transcription factor 16-like [Brachypodium
distachyon]
Length = 233
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F + H
Sbjct: 6 RGKIEIKRIENATNRQVTYSKRRTGIMKKAKEL---TVLCDAQVAIIM--FSSTGKYHEF 60
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW-WE 121
+I + Y A L +Q+ ++ R L N LK + R T+ R
Sbjct: 61 CSPGIDIKGIFDRYQQALGTSLWIEQYENMQRTL-------NHLKDINRNLRTEIRQRMG 113
Query: 122 TPVDELNLQELLQMDSAVD 140
+D L +EL ++ VD
Sbjct: 114 EDLDSLEFEELRGLEQNVD 132
>gi|328784471|ref|XP_001120126.2| PREDICTED: hypothetical protein LOC724322 [Apis mellifera]
Length = 591
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 364 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 402
>gi|84311264|gb|ABC55435.1| FLC-like 1 splice variant 1 [Beta vulgaris subsp. maritima]
Length = 215
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|9857312|dbj|BAB11939.1| MADS-box protein [Rosa rugosa]
Length = 203
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRKNGIIKKAKEITV---LCDAKVSLI 46
>gi|356562644|ref|XP_003549579.1| PREDICTED: agamous-like MADS-box protein AGL8-like [Glycine max]
Length = 239
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 23/161 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++++K+IEN+ +R +TFSKR SG+ KKA EI LC V I F +L +
Sbjct: 3 RGRVDLKRIENKINRQVTFSKRRSGLLKKAREIS---VLCDADVALIV--FSTKGKLFDY 57
Query: 69 NIHPLVKAYSHARINELNQQHNDLLRQL--DEEKEQQNMLKQMRRVK-------ETQPRW 119
+ P +K RI E ++++ RQL D++ +N + + ++K Q +
Sbjct: 58 SNEPCMK-----RILERYERYSYAERQLAGDDQAPNENWVIEHEKLKARVEVLQRNQRNF 112
Query: 120 WETPVDELNLQEL----LQMDSAVDDLHQTFLAKINEKTAA 156
+D LNL+ L Q+DSA+ + +NE +A
Sbjct: 113 MGEDLDSLNLRGLQSLEQQLDSALKLIRSRKNQAMNESISA 153
>gi|189214371|gb|ACD85120.1| B-class MADS-box protein AP3-3 [Phaius tancarvilleae]
Length = 225
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA EI LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKAREITV---LCDADVSLI 46
>gi|299893448|gb|ADJ57919.1| MADS affecting flowering 2 variant 2 [Arabidopsis thaliana]
gi|299893456|gb|ADJ57923.1| MADS affecting flowering 2 variant 1 [Arabidopsis thaliana]
Length = 175
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNML 106
DN+ ++ Y H D L LD ++ +N L
Sbjct: 58 ASGDNMSKIIDRY--------EIHHADELEALDLAEKTRNYL 91
>gi|194692682|gb|ACF80425.1| unknown [Zea mays]
gi|195638866|gb|ACG38901.1| MADS-box transcription factor 22 [Zea mays]
gi|413939001|gb|AFW73552.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 228
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TFSKR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFSKRRRGLFKKAQELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ Y+ N +LN +H+ ++ E L+QMR
Sbjct: 60 SSMNEIIDKYNTHSKNLGKTEQPSLDLNLEHSKYANLNEQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVDD-LH-------QTFLAKINE 152
++ LN++EL Q++ ++ LH Q FL +IN+
Sbjct: 113 ---EELEGLNVEELQQLEKNLESGLHRVLQTKDQQFLEQIND 151
>gi|84311261|gb|ABC55432.1| FLC-like 1 splice variant 4 [Beta vulgaris subsp. maritima]
Length = 214
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|83316232|gb|ABC02398.1| APETALA3-like protein [Akebia trifoliata]
Length = 227
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR +GI KKA E+ LC V I F +L ++
Sbjct: 3 RGKIEIKRIENPTNRQVTFSKRRAGIIKKARELSV---LCDAQVSLIM--FSATEKL-SE 56
Query: 69 NIHPLV---KAYSH----ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P V K + ARIN + + + L+++KE L+ KE + R E
Sbjct: 57 YISPTVTTKKVFDRYQQTARINLWSTHYERMQENLNKQKEINRRLR-----KEIRQRMGE 111
Query: 122 TPVDELNLQEL 132
++EL++ L
Sbjct: 112 -DLNELSIDVL 121
>gi|78146180|gb|ABB22779.1| PISTILLATA-like MADS box protein [Crocus sativus]
Length = 210
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC+ V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRNGIIKKAREIS---VLCECEVSLV 46
>gi|30172219|dbj|BAC75969.1| MADS-box transcription factor [Asparagus officinalis]
Length = 225
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGIMKKAKELTV---LCDAQVSLI 46
>gi|402867039|ref|XP_003897676.1| PREDICTED: serum response factor [Papio anubis]
gi|383409307|gb|AFH27867.1| serum response factor [Macaca mulatta]
gi|384940614|gb|AFI33912.1| serum response factor [Macaca mulatta]
Length = 508
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 196
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 197 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 256
Query: 100 KEQQNMLK 107
E ++ LK
Sbjct: 257 GETKDTLK 264
>gi|317106679|dbj|BAJ53182.1| JHL18I08.16 [Jatropha curcas]
Length = 105
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +T+SKR +G++KKA+E+ LC V I F +LH +
Sbjct: 3 RGKIQIKRIENSTNRQVTYSKRRNGLFKKANEL---TVLCDAKVSIIM--FSSTGKLH-E 56
Query: 69 NIHP 72
I P
Sbjct: 57 YISP 60
>gi|218195563|gb|EEC77990.1| hypothetical protein OsI_17379 [Oryza sativa Indica Group]
Length = 241
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+KKIEN +R +TFSKR G+ KKA+E+ AI LC + I F G +++
Sbjct: 3 RGRVELKKIENPTNRQVTFSKRRMGLLKKANEL--AI-LCDAQIGVIV--FSGTGKMYEY 57
Query: 69 NIHP 72
+ P
Sbjct: 58 SSPP 61
>gi|161158770|emb|CAM59043.1| MIKC-type MADS-box transcription factor WM3B [Triticum aestivum]
Length = 254
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAY--SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+++ + Y +HA + ++ Q ++E + Q++ ++ T V
Sbjct: 60 NSVKATIDRYKKAHACGSTSGVPLIEVNAQQYYQQEAARLRHQIQMLQSTNKHLVGDSVG 119
Query: 126 ELNLQELLQMDSAVDDLHQTFLAKINE 152
L+L+EL Q++S ++ A+ NE
Sbjct: 120 NLSLKELKQLESRLEKGIAKIRARKNE 146
>gi|417381811|gb|AFX61406.1| APETALA3-like MADS-box transcription factor [Narcissus
bulbocodium subsp. quintanilhae]
Length = 262
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGITKKAKELTV---LCDAQVSLI 46
>gi|356498584|ref|XP_003518130.1| PREDICTED: agamous-like MADS-box protein AGL18-like [Glycine max]
Length = 276
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+KKIEN + R +TFSKR +G+ KKA E+ LC V I G + + N
Sbjct: 3 RGKIEIKKIENLNSRQVTFSKRRNGLLKKAKELS---VLCDAEVAVIIFSSTGKLYEFSN 59
Query: 68 DNIHPLVKAYSHA 80
++ + YS
Sbjct: 60 TSMEHTLSRYSKG 72
>gi|284178654|gb|ADB81909.1| MIKC* MADS-box transcription factor [Funaria hygrometrica]
Length = 416
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+KKIEN +R +T+SKR +G+ KKA +E LC + I G ++Q N
Sbjct: 3 RVKLEIKKIENSTNRQVTYSKRRNGLIKKA---YELSVLCDIDLALIMFSPSGKLTQYCN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+I ++ +++ +E N+ D+L
Sbjct: 60 CSIEEVIGRFANLPAHERNKSFEDML 85
>gi|89892025|gb|ABD78852.1| MADS-box transcription factor PISTILLATA [Clianthus maximus]
Length = 110
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR +GI KKA EI LC + I G S ++
Sbjct: 3 RGKIEIKRIENTSNRQVTYSKRKNGILKKAKEISV---LCDAQLSLI---IFGASGKMHE 56
Query: 69 NIHP------LVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVK 113
I P ++ Y A + + +H +L ++D +KE +M ++R +K
Sbjct: 57 YISPSTTLIDILDRYQRASGKTIWDTKHENLSNEIDRIKKENDSMQIELRHLK 109
>gi|218198267|gb|EEC80694.1| hypothetical protein OsI_23120 [Oryza sativa Indica Group]
Length = 199
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
G +K +QKIEM I+ ++ R +TFSKR G++KKASEI
Sbjct: 6 GGTSKGKQKIEMCCIDGKEKRQVTFSKRRRGLFKKASEI 44
>gi|417411032|gb|JAA51970.1| Putative regulator of arginine metabolism, partial [Desmodus
rotundus]
Length = 476
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 104 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 163
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 164 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 223
Query: 100 KEQQNMLKQMRRV 112
E ++ LK + V
Sbjct: 224 GETKDSLKPVFTV 236
>gi|51849635|dbj|BAD42349.1| PISTILLATA-like protein [Nymphaea tetragona]
Length = 217
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENASNRQVTFSKRKQGILKKAREIS---VLCDAQVSLI 46
>gi|410610257|gb|AFV74897.1| PISTILLATA-like protein, partial [Champereia manillana]
Length = 195
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 14 MKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVK-AIANRFLGMSQLH-----N 67
+K+IEN +R +T+SKR +GI KKA EI LC V AI F ++H
Sbjct: 1 IKRIENSSNRQVTYSKRRTGIIKKAKEIS---VLCDAEVSLAI---FASSGKMHEFCTPT 54
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
+ +++ Y L + +H +L +LD +KE M Q+R +K +
Sbjct: 55 TTLTKILEGYHKQSGKRLWDAKHENLSNELDRIKKENDTMQIQLRHLKGED-------IT 107
Query: 126 ELNLQELLQMDSAVD 140
LN+QEL+ ++ A++
Sbjct: 108 SLNIQELIDLEDALE 122
>gi|391344010|ref|XP_003746298.1| PREDICTED: uncharacterized protein LOC100903951 [Metaseiulus
occidentalis]
Length = 322
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I N+ R TFSKR +GI KKA E+
Sbjct: 103 GKKTKGRVKIKMEFIPNKLRRYTTFSKRKTGIMKKAYEL 141
>gi|290465731|gb|ADD25210.1| PI [Nymphaea odorata]
Length = 217
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENASNRQVTFSKRKQGILKKAREIS---VLCDAQVSLI 46
>gi|58201609|gb|AAW66881.1| MADS box transcription factor [Elaeis guineensis]
Length = 224
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 60 NSVKATIERYKRA 72
>gi|308223347|gb|ADO23651.1| agamous-like 1 [Lilium formosanum]
Length = 245
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELN 86
+++ ++ Y A + N
Sbjct: 60 NSVKGTIERYKKASSDAFN 78
>gi|218118122|dbj|BAH03322.1| MADS-box transcription factor [Habenaria radiata]
Length = 210
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLH- 66
R E+K+IEN +R +TFSKR SGI KKA EI LC V + LG +S+
Sbjct: 3 RGNTEIKRIENSTNRQVTFSKRRSGIIKKAREISV---LCDAQVSLVIFSSLGKLSEYCS 59
Query: 67 -NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETP 123
+ + +++ Y +L + H +L ++D +KE NM ++R +K
Sbjct: 60 PSTTLPKMLERYQQNSGKKLWDATHENLSAEIDRIKKENDNMQIELRHLKGED------- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEK 153
++ LN +EL+ ++ A+ Q L + EK
Sbjct: 113 LNSLNPKELIPIEEAL----QNGLTSVREK 138
>gi|146422153|ref|XP_001487018.1| hypothetical protein PGUG_00395 [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 41 GGKPQKERRKIEIKFIQDKSRRHITFSKRKAGIMKKAYEL 80
>gi|62122343|dbj|BAD93166.1| MADS-box transcription factor GbMADS2 [Ginkgo biloba]
Length = 221
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIEMK+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEMKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEFAN 59
Query: 68 DNIHPLVKAY-------SHAR-INELNQQH 89
+++ + Y SH I+E N Q+
Sbjct: 60 NSVKRTIDRYKKTCADNSHGGAISECNSQY 89
>gi|22090618|dbj|BAC06829.1| MADS-box protein PpMADS1 [Physcomitrella patens subsp. patens]
Length = 281
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R KIE+KKIEN R +TFSKR G+ KKA E+ A+ LC V + G
Sbjct: 3 RGKIEIKKIENTTSRQVTFSKRRGGLLKKAHEL--AV-LCDAEVALVIFSSTGKHFEFAS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHN-DLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+ ++ +++ Y + + + N DLL +E + +Q+ R++ +Q +
Sbjct: 60 SGSMRDIIERYRKSSDGAVKRGTNTDLL-----GREVIKLKQQVERLESSQRHMLGEDLS 114
Query: 126 ELNLQELLQMDSAVD 140
L + +LL+++ +D
Sbjct: 115 ALKVSDLLELEQQLD 129
>gi|374432933|gb|AEZ51869.1| MADS-box protein 3 [Cymbidium ensifolium]
Length = 234
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC + I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEIALIVFSTRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHARINELNQQH-NDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
+I ++ Y N ++ Q ++E M Q++ ++ + +
Sbjct: 60 SSITATIEKYKKTSAGGSNSGSLMEVNSQQYYQQESAKMSHQIQILQNSSRHLMGEGLSS 119
Query: 127 LNLQELLQMDSAVD 140
LNL+EL Q+++ ++
Sbjct: 120 LNLKELKQLENRLE 133
>gi|344234794|gb|EGV66662.1| SRF-TF-domain-containing protein [Candida tenuis ATCC 10573]
Length = 245
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 42 GGKSQKERRKIEIKFIQDKTRRHITFSKRRAGIMKKAYEL 81
>gi|51889428|dbj|BAD42443.1| PISTILLATA-like protein [Amborella trichopoda]
Length = 211
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR SGI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSANRQVTYSKRKSGILKKAKEISV---LCDAKVSLV 46
>gi|19743774|gb|AAL92522.1| AG-like protein [Gossypium hirsutum]
Length = 244
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V +A G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVAFSSRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 75 NSVKATIERYKKA 87
>gi|305862052|gb|ADM72966.1| PISTILLATA-like protein 2c [Platanus x acerifolia]
gi|305862058|gb|ADM72969.1| PISTILLATA-like protein 2c [Platanus x acerifolia]
Length = 146
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I G MS+ H+
Sbjct: 3 RGKIEIKRIENLTNRQVTYSKRKNGIIKKARELTV---LCDAKVNLIIFSSSGKMSEYHS 59
Query: 68 DNI 70
+I
Sbjct: 60 PSI 62
>gi|237701181|gb|ACR16051.1| DEFICIENS-like MADS-box transcription factor [Spiranthes odorata]
Length = 225
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R KIE+KKIEN +R +T+SKR +GI KKA E+ LC V I +F
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGILKKAKEL---TVLCDAEVSLIMFSSTGKFSEYCS 59
Query: 65 LHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
++ + + IN + Q+ L L+ KE + LK+ R +W +
Sbjct: 60 PSTESKKVFDRYQQVSGINLWSAQYEKLQNTLNHLKEINHNLKRELR------QWTGEEL 113
Query: 125 DELNLQELLQMDSAVDD 141
+ L+++EL ++ +D+
Sbjct: 114 EGLDIKELRGLEQNMDE 130
>gi|212525792|gb|ACJ26767.1| MADS-12 [Gossypium hirsutum]
Length = 213
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEI---TVLCDAKVSLII--FASSGKMH 55
>gi|190344594|gb|EDK36297.2| hypothetical protein PGUG_00395 [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 41 GGKPQKERRKIEIKFIQDKSRRHITFSKRKAGIMKKAYEL 80
>gi|122938399|gb|ABM69045.1| MADS-box protein MADS7 [Gossypium hirsutum]
Length = 234
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG 61
+ +K R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G
Sbjct: 11 SSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRG 67
Query: 62 -MSQLHNDNIHPLVKAYSHA 80
+ + N+++ ++ Y A
Sbjct: 68 RLYEYANNSVRATIERYKKA 87
>gi|84311253|gb|ABC55429.1| FLC-like 1 splice variant 2 [Beta vulgaris]
gi|124298195|gb|ABN04206.1| FLC-like 1 splice variant 2 [Beta vulgaris subsp. vulgaris]
Length = 201
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|62132641|gb|AAX69070.1| MADS box protein M8 [Pisum sativum]
Length = 241
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A N + ++E + +Q+R ++ + L
Sbjct: 75 NSVRATIERYKKACAASTNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALGSL 134
Query: 128 NLQELLQMDSAVD 140
+L+EL ++ ++
Sbjct: 135 SLKELKNLEGRLE 147
>gi|315418852|gb|ADU15473.1| AP3 [Actinidia chinensis]
Length = 227
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRNGIFKKAQEL---TVLCDAKVSLI 46
>gi|339235923|ref|XP_003379516.1| serum response factor [Trichinella spiralis]
gi|316977821|gb|EFV60876.1| serum response factor [Trichinella spiralis]
Length = 308
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 131 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 169
>gi|241619714|ref|XP_002407153.1| conserved hypothetical protein [Ixodes scapularis]
gi|215500946|gb|EEC10440.1| conserved hypothetical protein [Ixodes scapularis]
Length = 224
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 74 GKKTKGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 112
>gi|197690821|dbj|BAG69621.1| MADS-box transcription factor [Lilium formosanum x Lilium
longiflorum]
Length = 244
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELN 86
+++ ++ Y A + N
Sbjct: 60 NSVKGTIERYKKASSDAFN 78
>gi|117501338|gb|ABK34952.1| APETALA-3-like protein [Chimonanthus praecox]
Length = 214
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRGGILKKAREITV---LCDAEVSLI 46
>gi|84311255|gb|ABC55430.1| FLC-like 1 splice variant 3 [Beta vulgaris]
gi|124298196|gb|ABN04207.1| FLC-like 1 splice variant 3 [Beta vulgaris subsp. vulgaris]
Length = 200
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|294658992|ref|XP_461321.2| DEHA2F22506p [Debaryomyces hansenii CBS767]
gi|202953533|emb|CAG89725.2| DEHA2F22506p [Debaryomyces hansenii CBS767]
Length = 241
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 2 AGKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GK+ K R+KIE+K I+++ R ITFSKR +GI KKA E+
Sbjct: 47 GGKQQKERRKIEIKFIQDKSRRHITFSKRKAGIMKKAYEL 86
>gi|122938393|gb|ABM69042.1| MADS-box protein MADS4 [Gossypium hirsutum]
Length = 246
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA-------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWW 120
+++ ++ Y A + E+N Q ++E + Q+R ++ T
Sbjct: 75 NSVKATIERYKKASDSSNTGSVAEVNAQF--------YQQEADKLRNQIRNLQNTNRHML 126
Query: 121 ETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
V L ++EL +++ ++ +K NE
Sbjct: 127 GESVGGLPMKELKSLETRLEKGISRIRSKKNE 158
>gi|84311263|gb|ABC55434.1| FLC-like 1 splice variant 2 [Beta vulgaris subsp. maritima]
Length = 201
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|413954202|gb|AFW86851.1| putative MADS-box transcription factor family protein [Zea mays]
Length = 246
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 48/207 (23%)
Query: 3 GKKTKR-RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------------- 41
GK+T R RQKIE+++I+N++ R +T KR G+ KKASE+
Sbjct: 39 GKRTSRGRQKIEIRRIDNKESRQVTQCKRKGGLLKKASELHLLCGAQVAIIVFKRRDPER 98
Query: 42 --------------WEAIHLCQPSVKAIANRFL------GMSQLHNDNIHPLVKAYSHAR 81
A + PSV + +R G++ + + +A AR
Sbjct: 99 KEVPVPPRGQRDDGGLAFAMGTPSVDHVLHRCGLLHADEGLTAIQDVGAIAAERAVMEAR 158
Query: 82 INELNQQHNDLLRQLDEEKEQQNMLKQ--MRRVKETQPR-WWETPVDELNLQELLQMDSA 138
+ Q ++ EK + + + Q ++ V+ T R WWE V L EL S
Sbjct: 159 AGQTEQTRA----LVEAEKARNDAIGQKVLQAVEVTGRRFWWEVDVGVLGEAELPVFTSQ 214
Query: 139 VDDLHQTFLAKINEKTAAAAASSSVAP 165
+ L + + N+ +A + AP
Sbjct: 215 LQRLRDSVRLQANKSRTSATPAGVAAP 241
>gi|427192297|dbj|BAM71400.1| transcription factor [Pyrus pyrifolia]
Length = 242
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSNRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ + Y A + N ++E + +Q+R ++ + + L
Sbjct: 75 NSVRATIDRYKKACSDPTNGGSVSEANTQFYQQEASKLRRQIREIQNSNRHILGEALSTL 134
Query: 128 NLQELLQMDSAVDDLHQTFLAKINE 152
N +EL ++ ++ +K NE
Sbjct: 135 NTKELKNLEGRLEKGISRIRSKKNE 159
>gi|372450329|gb|AEX92972.1| MADS box protein 6 [Agave tequilana]
Length = 226
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V +
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGIMKKAKEL---TVLCDAEVSLV 46
>gi|283476350|emb|CAX65664.1| GSQUA6 protein [Gerbera hybrid cultivar]
Length = 214
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R ++ +K+IEN+ +R +TFSKR SG+ KKA EI LC V I G + +
Sbjct: 3 RGRVTLKRIENKINRQVTFSKRRSGLLKKAHEISV---LCDADVALIIFSTKGKLCEYAT 59
Query: 68 DN----IHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
D+ I + YS+A + +L HN+ Q + E + ++ +++ Q +
Sbjct: 60 DSSMEKILERYERYSYAEM-QLTATHNE--SQGNWTMEHAKLKARIELLQKKQRHFMGEE 116
Query: 124 VDELNLQELLQMDSAVD 140
VD L+L+EL ++ +D
Sbjct: 117 VDSLSLKELQNLEQQLD 133
>gi|84311262|gb|ABC55433.1| FLC-like 1 splice variant 3 [Beta vulgaris subsp. maritima]
Length = 200
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R+KIEMK+IE++ R +TFSKR SG+ KKA E+ LC V +
Sbjct: 3 RRKIEMKRIEDKSSRQVTFSKRRSGLIKKARELS---ILCDVDVAVLV 47
>gi|351723725|ref|NP_001237033.1| AGL15 protein [Glycine max]
gi|38326710|gb|AAR17483.1| AGL15 [Glycine max]
gi|38326712|gb|AAR17484.1| AGL15 [Glycine max]
Length = 235
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+I+N R +TFSKR +G++KKA E+ LC V I
Sbjct: 3 RGKIEIKRIDNASSRQVTFSKRRTGLFKKAQELS---ILCDAEVAVIV 47
>gi|51849649|dbj|BAD42356.1| PISTILLATA-like protein [Nuphar japonica]
Length = 217
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR GI KKA EI LC V I
Sbjct: 3 RGKIEIKRIENASNRQVTFSKRKQGILKKAKEIS---VLCDSQVSLI 46
>gi|20513260|dbj|BAB91550.1| MADS-box transcription factor [Lilium regale]
Length = 228
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA+E+ LC V +
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRTGIIKKATEL---TVLCDAEVSLL 46
>gi|15216293|dbj|BAB63261.1| MADS-box protein [Rosa rugosa]
Length = 261
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K IEN+ +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTV---LCDAQVSLI 46
>gi|323650495|gb|ADX97328.1| SEPALLATA1-like protein [Mangifera indica]
Length = 241
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 16/140 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R ++E+++IEN+ +R +TF+KR +G+ KKA +E LC+ V I F +L+
Sbjct: 3 RGRVELRRIENKINRQVTFAKRRNGLLKKA---YELSVLCEAEVALII--FSSRGKLYEF 57
Query: 67 --NDNIHPLV---KAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
NI + ++YS+ + E N +ND+ E + ++ +Q+ K +Q +
Sbjct: 58 SSTSNIASTLERYESYSYGSL-EANLPNNDIESNYQEYLQLKSRFEQL---KHSQRQLLG 113
Query: 122 TPVDELNLQELLQMDSAVDD 141
+ +L + +L +++ +DD
Sbjct: 114 EDIGDLGISDLERLERQLDD 133
>gi|408689657|gb|AFU81372.1| SHATTERPROOF [Medicago truncatula]
Length = 244
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVVFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+++ ++ Y A N + ++E + +Q+R ++ + L
Sbjct: 75 NSVRATIERYKKACAASTNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALGSL 134
Query: 128 NLQELLQMDSAVD 140
+L+EL ++ ++
Sbjct: 135 SLKELKNLEGRLE 147
>gi|189214327|gb|ACD85098.1| B-class MADS-box protein AP3-2 [Galeola falconeri]
Length = 224
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|217071312|gb|ACJ84016.1| unknown [Medicago truncatula]
gi|388522739|gb|AFK49431.1| unknown [Medicago truncatula]
Length = 225
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
RQKI++KKI+N R +TFSKR GI+KKA E+ LC V + G + + +
Sbjct: 3 RQKIKIKKIDNATARQVTFSKRRRGIFKKAEELS---ILCDAEVGLVIFSTTGKLYEYAS 59
Query: 68 DNIHPLVKAYSH 79
N+ ++ Y
Sbjct: 60 SNMKDIITRYGQ 71
>gi|148910963|gb|ABO93622.2| APETALA3 [Platanus x acerifolia]
Length = 225
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +T+SKR GI KKA E+ LC V I F + H +
Sbjct: 3 RGKIEIKRIENTTNRQVTYSKRRGGITKKAQELSV---LCDAEVSLIM--FSSTGKFH-E 56
Query: 69 NIHP------LVKAYSH-ARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWE 121
I P + Y +RI+ + + L++ KE N L+ +E + R E
Sbjct: 57 YISPTTTTKKIFDRYQQISRIDLWQPHYEKMQNNLNKLKEVNNNLR-----REIRQRMGE 111
Query: 122 TPVDELNLQELLQMDSAVDD 141
+++L+++EL ++ +DD
Sbjct: 112 -DLNDLSIEELRGLEQNLDD 130
>gi|89887324|gb|ABD78317.1| Def-like protein [Primula vulgaris]
gi|89887328|gb|ABD78319.1| Def-like protein [Primula vulgaris]
Length = 228
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KI++KKIEN +R +T+SKR +G++KKA E+ A+ LC V I G +++H
Sbjct: 3 RGKIQIKKIENATNRQVTYSKRRNGLFKKAGEL--AV-LCDAKVSIIM--LSGTNKIH 55
>gi|602904|emb|CAA56657.1| SLM3 [Silene latifolia subsp. alba]
Length = 227
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R+KI++KKIEN +R +T+SKR +G++KKA+E+ LC +V I
Sbjct: 3 RRKIQIKKIENLTNRQVTYSKRRNGLFKKANEL---TVLCDATVSII 46
>gi|46917358|dbj|BAD18011.1| MADS-box transcription factor [Asparagus virgatus]
Length = 226
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A ++E N Q+ ++E + +Q+ ++ +
Sbjct: 60 NSVKATIERYKKACTDTTNTGTVSEANSQY--------YQQEASKLRQQITNLQNSNRNL 111
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
+ + L++L Q++S ++ +K NE
Sbjct: 112 MGESLSSMGLRDLKQLESRLEKGISKIRSKKNE 144
>gi|356511379|ref|XP_003524404.1| PREDICTED: agamous-like MADS-box protein AGL61-like [Glycine max]
Length = 185
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 33/144 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
R+KIE+ +++ + R +TFSKR +G++KKA+E+ + P V
Sbjct: 3 RRKIEIATLKDPNTRQVTFSKRRTGLFKKANELSILCGAEIAIVVFSIGNKPYSFGHPGV 62
Query: 53 KAIANRFLGMSQLHNDNIHPLVKAYSH------ARINELNQQHNDLLRQ-LDEEKE---- 101
IA +FL + N + + A + +N LNQQ +D+ Q L+EEK+
Sbjct: 63 DVIAAKFL--QEAANSSDAKQIDAQGNNPSNELGDMNRLNQQLSDVQTQILEEEKKGAEH 120
Query: 102 ----QQNMLKQMRRVKETQPRWWE 121
+Q+ + Q+ + KE Q + E
Sbjct: 121 DERLKQHQVTQLSQYKELQASYLE 144
>gi|168055719|ref|XP_001779871.1| MIKCC MADS-domain protein PpMADS1 [Physcomitrella patens subsp.
patens]
gi|162668684|gb|EDQ55286.1| MIKCC MADS-domain protein PpMADS1 [Physcomitrella patens subsp.
patens]
Length = 283
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R KIE+KKIEN R +TFSKR G+ KKA E+ A+ LC V + G
Sbjct: 3 RGKIEIKKIENTTSRQVTFSKRRGGLLKKAHEL--AV-LCDAEVALVIFSSTGKHFEFAS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHN-DLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVD 125
+ ++ +++ Y + + + N DLL +E + +Q+ R++ +Q +
Sbjct: 60 SGSMRDIIERYRKSSDGAVKRGTNTDLL-----GREVIKLKQQVERLESSQRHMLGEDLS 114
Query: 126 ELNLQELLQMDSAVD 140
L + +LL+++ +D
Sbjct: 115 ALKVSDLLELEQQLD 129
>gi|225431227|ref|XP_002273223.1| PREDICTED: floral homeotic protein DEFICIENS [Vitis vinifera]
gi|115492982|gb|ABI98021.1| flowering-related B-class MADS-box protein [Vitis vinifera]
gi|147802866|emb|CAN66176.1| hypothetical protein VITISV_019954 [Vitis vinifera]
Length = 225
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTV---LCDAKVSLI 46
>gi|237701155|gb|ACR16038.1| DEFICIENS-like MADS-box transcription factor [Gongora galeata]
Length = 222
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|224072566|ref|XP_002303785.1| predicted protein [Populus trichocarpa]
gi|222841217|gb|EEE78764.1| predicted protein [Populus trichocarpa]
Length = 90
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R+K+E+K+IEN+ R +TFSKR +G++KKA E+
Sbjct: 3 RKKVELKRIENKSSRQVTFSKRRNGLFKKAREL 35
>gi|110798211|gb|ABG90945.1| PI1 [Pharus virescens]
Length = 207
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRNGILKKAREISV---LCDAEVSVV 46
>gi|110613491|gb|ABG78568.1| AP3-like MADS box protein [Cymbidium hybrid cultivar]
Length = 227
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSTTGKLADYCSPST 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K I R+ GM L N + +H + E+NQ +RQ + E+ + +K
Sbjct: 63 DIKGIYERYQIVTGMD-LWNAQYERMQNTLNH--LKEINQNLRKEIRQRNGEELEGLDIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|417381788|gb|AFX61404.1| deficiens [Allium cepa]
Length = 224
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA E+ LC V I
Sbjct: 3 RGKIEIKKIENATNRQVTYSKRKAGIMKKAKELTV---LCDAQVSII 46
>gi|403261923|ref|XP_003923351.1| PREDICTED: serum response factor [Saimiri boliviensis boliviensis]
Length = 549
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 178 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 216
>gi|384096584|gb|AFH66787.1| AP3-like MADS-box 3 protein [Cymbidium ensifolium]
Length = 222
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|159459970|gb|ABW96393.1| AP3-related protein B [Dendrobium moniliforme]
Length = 222
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|38680587|gb|AAR26629.1| MADS box transcription factor [Phalaenopsis equestris]
Length = 222
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|4581870|gb|AAD24772.1|AF120007_1 serum response factor [Junonia coenia]
Length = 125
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 8 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 46
>gi|189214319|gb|ACD85094.1| B-class MADS-box protein AP3-2 [Dendrobium hybrid cultivar]
Length = 222
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|37359697|dbj|BAC97838.1| peony [Ipomoea nil]
Length = 244
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 20 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 76
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ + Y + ++E N Q ++E + +Q+R ++ + +
Sbjct: 77 NSVRATIDRYKKHHSDSTNTGSVSEANTQFY--------QQESAKLRRQIREIQTSNKQI 128
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++ V+
Sbjct: 129 LGESLGVLNHKELKNLEGKVE 149
>gi|316890780|gb|ADU56836.1| MADS-box protein DEF subfamily [Coffea arabica]
Length = 219
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE++KIEN +R +T+SKR +GI+KKA E+ LC V I
Sbjct: 3 RGKIEIRKIENSTNRQVTYSKRRNGIFKKAHELSV---LCDAKVSLI 46
>gi|298112178|gb|ADI58466.1| DEFICIENS [Cymbidium faberi]
Length = 222
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|298112164|gb|ADI58459.1| DEFICIENS [Cymbidium goeringii]
Length = 222
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|215433735|gb|ACJ66726.1| MADS box AP3-like protein 2 [Dendrobium hybrid cultivar]
Length = 227
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENSTSRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPSA 62
Query: 52 -VKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K I R+ GM L N + H ++E+NQ +RQ E+ + +K
Sbjct: 63 DIKGIYERYQVVTGMD-LWNAQYERMQNTLKH--LSEINQNLRKEIRQRKGEELEGMEIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|196011818|ref|XP_002115772.1| hypothetical protein TRIADDRAFT_59812 [Trichoplax adhaerens]
gi|190581548|gb|EDV21624.1| hypothetical protein TRIADDRAFT_59812 [Trichoplax adhaerens]
Length = 349
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW 42
KKT+ RQKI++K I++++ R TFSKR GI KKA E+
Sbjct: 83 KKTRGRQKIDIKFIQDKNKRFTTFSKRKGGIMKKAFELC 121
>gi|255539603|ref|XP_002510866.1| mads box protein, putative [Ricinus communis]
gi|223549981|gb|EEF51468.1| mads box protein, putative [Ricinus communis]
Length = 213
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KI+M++IEN R +TFSKR +G+ KKA +E LC V I G +S+ +
Sbjct: 3 RGKIQMRRIENATSRQVTFSKRRNGLLKKA---YELSVLCDAEVAVIIFSQKGRLSEFAS 59
Query: 68 DNIHPLVKAY-SHAR-------------INELNQQHNDLLRQLDE-EKEQQNMLKQ 108
+ + ++ Y HA+ + EL ++ L+++++E E Q+ +L Q
Sbjct: 60 NEMQKTIERYRKHAKEVQAAGSVAKEQHVQELTEESAALVKKIEELEISQRKLLGQ 115
>gi|195643488|gb|ACG41212.1| MADS-box transcription factor 4 [Zea mays]
Length = 212
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN +R +TFSKR +G+ KKA EI LC+ V + F +L+ D
Sbjct: 3 RGKIKIKRIENSTNRQVTFSKRRAGLVKKAREIGV---LCETEVGVVI--FSSGGKLY-D 56
Query: 69 NIHPLVKAYSHARINELNQ----------QHNDLLRQLDE-EKEQQNMLKQMRRVK 113
P S +RI E Q +H +L ++D +KE NM Q+R +K
Sbjct: 57 YCSPRT---SLSRILEKYQTNSGKILWGEKHKNLSAEIDRVKKENDNMQIQLRHLK 109
>gi|52548154|gb|AAU82080.1| SHATTERPROOF2 [Arabidopsis lyrata subsp. petraea]
Length = 233
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPXVTEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++ ++
Sbjct: 127 LGESLGSLNFKELKNLEXXLE 147
>gi|397310276|gb|AFO38188.1| AGAMOUS1 [Thalictrum thalictroides]
Length = 209
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 60 NSVKKTIERYKKA 72
>gi|256052404|ref|XP_002569761.1| myocyte-specific enhancer factor 2a [Schistosoma mansoni]
Length = 717
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI----ANRFLGMSQ 64
R+KIE+K I++E +RL+TF+KR SG++KKA +E LC+ + + +NR +
Sbjct: 3 RKKIEIKFIKDEKNRLVTFAKRKSGLFKKA---YELSVLCECEIALLVFTRSNRLYQYAS 59
Query: 65 LHNDNIHPLVKAYSHARINEL 85
+ + H L + H R NE
Sbjct: 60 VTVE--HALQRLKKHHRANEF 78
>gi|20531753|gb|AAM27456.1|AF503913_1 MADS box protein [Lilium longiflorum]
gi|197690829|dbj|BAG69625.1| MADS-box transcription factor [Lilium formosanum x Lilium
longiflorum]
Length = 228
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR +GI KKA+E+ LC V +
Sbjct: 3 RGKIEIKKIENSTNRQVTYSKRRTGIIKKATEL---TVLCDAEVSLL 46
>gi|432959539|ref|XP_004086334.1| PREDICTED: uncharacterized protein LOC101158752, partial [Oryzias
latipes]
Length = 454
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 187 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 246
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDE 98
QP + + + L + L++ + P S R++ + DL Q+ E
Sbjct: 247 FATRKLQPMITSETGKALIQTCLNSPDSPPRCDPSSDQRMSATGFEETDLTYQVTE 302
>gi|29467048|dbj|BAC66963.1| MADS-box transcription factor AG [Agapanthus praecox]
Length = 235
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
++I ++ Y A
Sbjct: 60 NSIKSTIERYKKA 72
>gi|116831135|gb|ABK28522.1| unknown [Arabidopsis thaliana]
Length = 173
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 33/173 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPSV 52
R+KI+M+ +++ + R +TFSKR +G++KKASE+ + +P++
Sbjct: 3 RRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAKLGIVVFSPGGKPFSYGKPNL 62
Query: 53 KAIANRFL-------GMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
++A RF+ + + N P +K S R++ LNQ +++ EKE+
Sbjct: 63 DSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSE-RLDLLNQ-------EVEAEKERGE- 113
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAA 158
K +++ ++ ++ L L EL + + +H ++N A++
Sbjct: 114 -KSQEKLESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSC 165
>gi|397310278|gb|AFO38189.1| AGAMOUS1 [Thalictrum thalictroides]
Length = 217
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC+ V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCEAEVALIVFSSRGRLYEYSN 59
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 60 NSVKKTIERYKKA 72
>gi|268327050|dbj|BAI49494.1| SOC1 like protein [Malus x domestica]
Length = 213
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +M++IEN R +TFSKR SG+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMRRIENTTSRQVTFSKRRSGLLKKA---FELSVLCDAEVSLIIFSPRGKLYEFAS 59
Query: 68 DNIHPLVKAY-SHARINELNQQHNDLLRQLDEEK-EQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y HA+ N+ N + + + + K E +M+KQ+ ++ ++ + +
Sbjct: 60 SSMQGTIERYQKHAKDNQTNDKSSSSEQNMQHLKQEATSMMKQIELLEVSKRKLLGEGLG 119
Query: 126 ELNLQELLQMDSAVD 140
L EL +++ ++
Sbjct: 120 SCTLAELQEIEDQLE 134
>gi|60100348|gb|AAX13301.1| MADS box protein AP3 [Lotus japonicus]
Length = 229
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KI++K+IEN +R +T+SKR +G++KKA+E+ LC V I F +LH
Sbjct: 3 RGKIQIKRIENTTNRQVTYSKRRNGLFKKANEL---TVLCDAKVSIIM--FSSTGKLH 55
>gi|189214313|gb|ACD85091.1| B-class MADS-box protein AP3-3 [Brassavola nodosa]
Length = 222
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|295983992|gb|ADG63468.1| agamous-like protein [Lilium hybrid cultivar]
gi|332144700|dbj|BAK19510.1| MADS-box transcription factor [Lilium hybrid cultivar]
Length = 254
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELN 86
+++ ++ Y A + N
Sbjct: 60 NSVKGTIERYKKASSDAFN 78
>gi|224075435|ref|XP_002335856.1| predicted protein [Populus trichocarpa]
gi|224106581|ref|XP_002333663.1| predicted protein [Populus trichocarpa]
gi|222835871|gb|EEE74292.1| predicted protein [Populus trichocarpa]
gi|222837949|gb|EEE76314.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R+K+E+K+IEN+ R +TFSKR +G++KKA E+
Sbjct: 3 RKKVELKRIENKSSRQVTFSKRRNGLFKKAREL 35
>gi|288973109|gb|ADC79697.1| PISTILLATA-like protein [Euptelea pleiosperma]
Length = 185
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 14/137 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V + G +S+ +
Sbjct: 3 RGKIEIKRIENSTNRQVTYSKRRNGIIKKAKEISV---LCDAEVSLVIFSSTGKLSEYCS 59
Query: 68 DNIHPLVKAY--SHARINELNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPV 124
+ + Y S + + +H L +++ +KE NM+ ++R +K TP
Sbjct: 60 TTLMHALDRYNESSGKKKLWDAKHEHLSNEVNRIKKENDNMMIELRHLKGEDI----TP- 114
Query: 125 DELNLQELLQMDSAVDD 141
L+ +EL+ ++ A+++
Sbjct: 115 --LHYKELIPLEEALEN 129
>gi|242083128|ref|XP_002441989.1| hypothetical protein SORBIDRAFT_08g006460 [Sorghum bicolor]
gi|241942682|gb|EES15827.1| hypothetical protein SORBIDRAFT_08g006460 [Sorghum bicolor]
Length = 269
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGRIEIKRIENNTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDE----EKEQQNMLKQMRRVKETQPRWWETP 123
+++ ++ Y +++ + L + + ++E + Q++ ++ T
Sbjct: 60 NSVKATIERYK--KVHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDS 117
Query: 124 VDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L L+EL Q++S ++ A+ NE AA
Sbjct: 118 VGNLTLKELKQLESRLEKGISKVRARKNELLAA 150
>gi|213688850|gb|ABQ59274.4| deficiens 1 protein [Eustoma exaltatum subsp. russellianum]
Length = 226
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++KKIEN+ +R +T+SKR +G++KKA E+ LC V I
Sbjct: 3 RGKIQIKKIENQTNRQVTYSKRRNGLFKKAHELTV---LCDAKVSII 46
>gi|161158818|emb|CAM59067.1| MIKC-type MADS-box transcription factor WM22A [Triticum aestivum]
Length = 228
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R++ E+K+IE+ R +TF KR G++KKA E+ LC V I G +SQ +
Sbjct: 3 RERREIKRIESAAARQVTFPKRRRGLFKKAEELS---VLCDADVALIVFSSTGKLSQFAS 59
Query: 68 DNIHPLVKAYSHARIN---------ELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPR 118
+++ ++ YS N +LN +H+ D+ E L+QMR
Sbjct: 60 SSMNEIIDKYSTHSKNLGKTDRPALDLNLEHSKYANLNDQLAEASLRLRQMRG------- 112
Query: 119 WWETPVDELNLQELLQMDSAVD-DLH-------QTFLAKINE 152
++ L++ EL Q++ ++ LH Q FL +INE
Sbjct: 113 ---EELEGLSVDELQQLEKNLETGLHRVLQTKDQQFLEQINE 151
>gi|262479016|gb|ACY68439.1| putative APETALA3 [Dendrobium devonianum]
Length = 227
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQP-- 50
R KIE+KKIEN +R +T+SKR GI KKA E+ + C P
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSSTGKLADYCSPVT 62
Query: 51 SVKAIANRF---LGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK 107
+K I R+ GM L N + H +NE+NQ +RQ E+ + +K
Sbjct: 63 DIKGIYERYQVVTGMD-LWNAQYERMQNTLKH--LNEINQNLRKEIRQRKGEELEGMEIK 119
Query: 108 QMRRVKET 115
++R +++T
Sbjct: 120 ELRGLEQT 127
>gi|189214369|gb|ACD85119.1| B-class MADS-box protein AP3-2 [Phaius tancarvilleae]
Length = 222
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|296086326|emb|CBI31767.3| unnamed protein product [Vitis vinifera]
Length = 363
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 92 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 148
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y + ++E N Q ++E + +Q+R ++
Sbjct: 149 NSVRTTIERYKKVCSDSSNTGSVSEANAQF--------YQQEASKLRRQIRDIQNLNRHI 200
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL +++ ++
Sbjct: 201 LGEALSSLNFKELKNLETRLE 221
>gi|30523364|gb|AAP31680.1| flowering locus C [Brassica rapa]
Length = 197
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR SG+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRSGLIEKARQLS---VLCDASVALLVVSSSGKLYSFSA 59
Query: 67 NDNIHPLVKAYS--HAR-INELNQQ--------HNDLLRQLDEEKEQQNM 105
DN+ + Y HA + LN Q HN+LL +D + + N+
Sbjct: 60 GDNLVRTLDRYGKQHAGDLKALNLQSKALSYGSHNELLELVDSKLVESNV 109
>gi|357466873|ref|XP_003603721.1| Apetala3-like protein [Medicago truncatula]
gi|355492769|gb|AES73972.1| Apetala3-like protein [Medicago truncatula]
gi|363903274|gb|AEW43601.1| MADS-box transcription factor NMH7 [Medicago truncatula]
Length = 229
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KI++K+IEN +R +T+SKR +G++KKA+E+ LC V I F +LH
Sbjct: 3 RGKIQIKRIENTTNRQVTYSKRRNGLFKKANEL---TVLCDAKVSIIM--FSSTGKLH 55
>gi|62122347|dbj|BAD93168.1| MADS-box transcription factor GbMADS4 [Ginkgo biloba]
Length = 222
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +TFSKR G+ KKA E+ LC + I
Sbjct: 3 RGKIEIKKIENSTNRQVTFSKRRGGLLKKAHELSV---LCDAEIAVI 46
>gi|384096586|gb|AFH66788.1| AP3-like MADS-box 1 protein [Cymbidium ensifolium]
Length = 227
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI----------------WEAIHLCQPS- 51
R KIE+KKIEN +R +T+SKR GI KKA E+ + C PS
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRVGILKKAKELTVLCDAQVSLIMFSTTGKLADYCSPST 62
Query: 52 -VKAIANRFLGMS--QLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQ 108
+K I R+ M+ L N + +H + E+NQ +RQ + E+ + +K+
Sbjct: 63 DLKGIYERYQIMTGMDLWNAQYERMQNTLNH--LKEINQNLRKEIRQRNGEELEGMDIKE 120
Query: 109 MRRVKET 115
+R +++T
Sbjct: 121 LRGLEQT 127
>gi|114386386|gb|ABI74449.1| MADS-box protein [Malus x domestica]
Length = 230
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R+K+EMK+IEN R +TFSKR G+ KKA +E LC V I
Sbjct: 3 RKKVEMKRIENNTSRQVTFSKRRKGLLKKA---YELSVLCDAEVAVI 46
>gi|237701177|gb|ACR16049.1| DEFICIENS-like MADS-box transcription factor [Spiranthes odorata]
Length = 223
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
R KIE+KKIEN +R +T+SKR +GI KKASE+
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRAGIMKKASEL 35
>gi|197690825|dbj|BAG69623.1| MADS-box transcription factor [Lilium hybrid cultivar]
Length = 244
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELN 86
+++ ++ Y A + N
Sbjct: 60 NSVKGTIERYKKASSDAFN 78
>gi|17506351|ref|NP_492296.1| Protein UNC-120 [Caenorhabditis elegans]
gi|3875320|emb|CAB00023.1| Protein UNC-120 [Caenorhabditis elegans]
Length = 327
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I N+ R TFSKR +GI KKA E+
Sbjct: 41 GKKTKGRVKIKMEYINNKLRRYTTFSKRKTGIMKKAFEL 79
>gi|80751083|dbj|BAE48147.1| MADS-box transcription factor [Muscari armeniacum]
Length = 225
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+KKIEN +R +T+SKR SGI KKA E+ LC V +
Sbjct: 3 RGKIEIKKIENPTNRQVTYSKRRSGIMKKAKEL---TVLCDAEVSLV 46
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,508,531,051
Number of Sequences: 23463169
Number of extensions: 93093176
Number of successful extensions: 429002
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3737
Number of HSP's successfully gapped in prelim test: 483
Number of HSP's that attempted gapping in prelim test: 424643
Number of HSP's gapped (non-prelim): 4479
length of query: 172
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 40
effective length of database: 9,262,057,059
effective search space: 370482282360
effective search space used: 370482282360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)