BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043113
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
Query: 4 KKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHL 47
KK+K RQKIEM K++NE + +TFSKR SG++KKASE+ +
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 48 CQPSVKAIANRFLGMSQL--HNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNM 105
P+V ++ +RF+ + L H N L + ++ + +LN +L QL+ EK++ +
Sbjct: 63 GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122
Query: 106 LKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDL 142
LK++R + WWE PV+EL L +L +++L
Sbjct: 123 LKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENL 159
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 29/168 (17%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIW----------------EAIHLCQPSV 52
RQKI M KI+ E R +TFSKR +G++KKASE+ + PSV
Sbjct: 64 RQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSV 123
Query: 53 KAIANRFLG---MSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQM 109
+++ +R++ MS + + S A ELN Q +L +++EEK++ +++M
Sbjct: 124 ESVLDRYVSRNNMSLAQSQQLQG-----SPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178
Query: 110 RR--VKETQPRWWETPVDELNLQELLQMDSAVDDLHQTF---LAKINE 152
R+ V+ + WWE PV+E+N+ +L +M A+++L +T +A NE
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 38/168 (22%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI------------A 56
R+KI +KKI+N R +TFSKR GI+KKA E+ LC V I +
Sbjct: 3 REKIRIKKIDNITARQVTFSKRRRGIFKKADELS---VLCDADVALIIFSATGKLFEFSS 59
Query: 57 NR---FLGMSQLHNDNIHPLVKAYS-HARINELNQQHNDLLRQLDEEKEQQNMLKQMRRV 112
+R LG LH NI+ L+ S H R+ N L +L +E E + KQ+R++
Sbjct: 60 SRMRDILGRYSLHASNINKLMDPPSTHLRLENCN------LSRLSKEVEDKT--KQLRKL 111
Query: 113 KETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAAS 160
+ +D LNL+EL +++ L ++ L++++EK S
Sbjct: 112 RGED-------LDGLNLEELQRLEK----LLESGLSRVSEKKGECVMS 148
>sp|Q9AT76|AGL27_ARATH Agamous-like MADS-box protein AGL27 OS=Arabidopsis thaliana
GN=AGL27 PE=1 SV=1
Length = 196
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+KIE+K+IEN+ R +TFSKR +G+ KA ++ LC+ SV + G
Sbjct: 3 RRKIEIKRIENKSSRQVTFSKRRNGLIDKARQLS---ILCESSVAVVVVSASGKLYDSSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
D+I ++ Y QH D LR LD E++ QN L ++ Q + E VD
Sbjct: 60 GDDISKIIDRYEI--------QHADELRALDLEEKIQNYLPHKELLETVQSKLEEPNVDN 111
Query: 127 LNLQELLQMD 136
+++ L+ ++
Sbjct: 112 VSVDSLISLE 121
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K EMK+IEN R +TFSKR +G+ KKA +E LC V + F S+L+
Sbjct: 3 RGKTEMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALVI--FSPRSKLYEF 57
Query: 67 -NDNIHPLVKAYSHARINELNQQH--NDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETP 123
+ +I ++ Y RI E+ H ND +Q + E + K++ +++ ++ +
Sbjct: 58 SSSSIAATIERYQR-RIKEIGNNHKRNDNSQQARD--ETSGLTKKIEQLEISKRKLLGEG 114
Query: 124 VDELNLQELLQMDSAVD 140
+D +++EL Q+++ +D
Sbjct: 115 IDACSIEELQQLENQLD 131
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENSTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDEL 127
+NI ++ Y A + N + ++E + +Q++ ++ + + L
Sbjct: 60 NNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL 119
Query: 128 NLQELLQMDSAVD 140
+++EL Q+++ ++
Sbjct: 120 SVKELKQVENRLE 132
>sp|Q9FPN7|AGL31_ARATH Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana
GN=AGL31 PE=2 SV=2
Length = 196
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC+ S+ + G +L+
Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLS---ILCESSIAVLV--VSGSGKLYKS 57
Query: 67 --NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPV 124
DN+ ++ Y H D L LD ++ +N L ++ Q + E+ V
Sbjct: 58 ASGDNMSKIIDRYEI--------HHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNV 109
Query: 125 DELNLQELLQMD 136
D ++ L+ ++
Sbjct: 110 DNASVDTLISLE 121
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG- 61
+K R KIE+K+IEN +R +TF KR SG+ KKA +E LC V + G
Sbjct: 39 AEKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKA---YELSVLCDAEVALVVFSSRGR 95
Query: 62 MSQLHNDNIHPLVKAYSHAR--------INELNQQHNDLLRQLDEEKEQQNMLKQMRRVK 113
+ + N+++ ++ Y A + E+N QH ++E + +Q+ ++
Sbjct: 96 LYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHY--------QQEAAKLKQQITNLQ 147
Query: 114 ETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ + +N +EL Q++ +D A+ NE A
Sbjct: 148 NSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCA 190
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 27/144 (18%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KIE+K+IEN +R +TFSKR SGI KKA EI LC V + F +L+ D
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRSGILKKAREISV---LCDAEVGVVI--FSSAGKLY-D 56
Query: 69 NIHPLVKAYSHARINE----------LNQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQP 117
P S +RI E +++H L ++D +KE NM ++R +K
Sbjct: 57 YCSP---KTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGED- 112
Query: 118 RWWETPVDELNLQELLQMDSAVDD 141
++ L +EL+ ++ A+D+
Sbjct: 113 ------LNSLQPKELIMIEEALDN 130
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITV---LCDAKVSLII--FGNSGKMHEY 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWE 121
+ + ++ Y L + +H +L ++D +KE NM ++R +K
Sbjct: 58 CSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGED----- 112
Query: 122 TPVDELNLQELLQMDSAVDDLHQTFLAKINE 152
++ LN +EL+ ++ + + + AK +E
Sbjct: 113 --INSLNHKELMVLEEGLTNGLSSISAKQSE 141
>sp|Q90718|SRF_CHICK Serum response factor (Fragment) OS=Gallus gallus GN=SRF PE=2 SV=1
Length = 375
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 4 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 63
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 64 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 123
Query: 100 KEQQNMLKQMRRVKETQPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAAAAA 159
E +++LK V P T +Q+ S +LA ++ + +A
Sbjct: 124 GETKDVLKPTFTVTN-LPGTTSTIQTAPTTSSSMQVSSGPSFPITNYLAPVSASISPSAV 182
Query: 160 SSS 162
+S+
Sbjct: 183 TSA 185
>sp|P35632|AP3_ARATH Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3
PE=1 SV=1
Length = 232
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R KI++K+IEN+ +R +T+SKR +G++KKA E+ LC V I F ++LH +
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTV---LCDARVSIIM--FSSSNKLH-E 56
Query: 69 NIHPLVKAYSHARINELNQQHNDL---LRQLDEEKEQQNMLKQMRRVKETQ--PRWWETP 123
I P I +L Q +D+ Q + +E + L + R TQ R E
Sbjct: 57 YISPNTTT---KEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGEC- 112
Query: 124 VDELNLQELLQMDSAVDDLHQTF 146
+DEL++QEL +++ D++ TF
Sbjct: 113 LDELDIQELRRLE---DEMENTF 132
>sp|Q9S7Q7|FLC_ARATH MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC
PE=2 SV=1
Length = 196
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG--MSQLH 66
R+K+E+K+IEN+ R +TFSKR +G+ +KA ++ LC SV + G S
Sbjct: 3 RKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSV---LCDASVALLVVSASGKLYSFSS 59
Query: 67 NDNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWETPVDE 126
DN+ ++ Y +QH D L+ LD + + N ++ + + V
Sbjct: 60 GDNLVKILDRYG--------KQHADDLKALDHQSKALNYGSHYELLELVDSKLVGSNVKN 111
Query: 127 LNLQELLQMD 136
+++ L+Q++
Sbjct: 112 VSIDALVQLE 121
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I G M + +
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVIIFASSGKMHEFSS 59
Query: 68 DNIHPLVKAYSHARINEL-NQQHNDLLRQLDE-EKEQQNMLKQMRRVKETQPRWWETPVD 125
++ ++ Y L + +H +L ++++ +K+ NM ++R +K +
Sbjct: 60 TSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLK-------GEDIT 112
Query: 126 ELNLQELLQMDSAVDD 141
LN +EL+ ++ A+D+
Sbjct: 113 SLNHRELMMLEDALDN 128
>sp|Q2QW55|MAD33_ORYSJ MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica
GN=MADS33 PE=2 SV=2
Length = 202
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K++M++IEN R +TF KR G+ KKA E+ LC V I F +LH
Sbjct: 3 RGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSV---LCDADVGVII--FSSQGKLHEL 57
Query: 67 --NDNIHPLVKAY 77
N N+H LV+ Y
Sbjct: 58 ATNGNMHNLVERY 70
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN ++R++TFSKR +G+ KKA EI LC V I
Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITV---LCDAKVALI 46
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R +IE+K+IEN R +TF KR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGRIEIKRIENTTSRQVTFCKRRNGLLKKA---YELSVLCDAEVALIV--FSSRGRLYEY 57
Query: 67 --NDNIHPLVKAY---------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKET 115
N+N+ + Y S A + E+N Q ++E + Q++ ++ T
Sbjct: 58 SNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQY-------YQQESAKLRHQIQMLQNT 110
Query: 116 QPRWWETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
V L+L+EL Q++S ++ A+ NE A+
Sbjct: 111 NKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLAS 151
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A I E N Q+ ++E + +Q+R ++
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTITEANTQY--------YQQEASKLRRQIRDIQNLNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ LN +EL ++S ++
Sbjct: 127 LGESLGSLNFKELKNLESRLE 147
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 3 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 59
Query: 68 DNIHPLVKAYSHAR--------INELNQQH 89
+++ V+ Y A + E+N QH
Sbjct: 60 NSVKSTVERYKKANSDTSNSGTVAEVNAQH 89
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISV---LCDARVSVII--FASSGKMH 55
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R K+++++IENE R +TFSKR G+ KKA EI A+ LC V AI G + H
Sbjct: 3 RGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEI--AV-LCDVDVAAIVFSAKG-NLFHYA 58
Query: 69 NIHP----LVKAYSHARINELNQQHNDLLRQLDEEKEQQN-----MLKQMRRVKETQPRW 119
+ H +++ Y +EL + N+++ + E + + + ++ +K++Q
Sbjct: 59 SSHTTMERILEKYDR---HELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNL 115
Query: 120 WETPVDELNLQELLQMDSAVD 140
+D L LQ++ Q+++ +D
Sbjct: 116 MGQELDSLTLQDIQQLENQID 136
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN + R +TFSKR SG+ KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRSGLLKKARELS---VLCDAEVAVIV 47
>sp|Q40703|MADS4_ORYSJ MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica
GN=MADS4 PE=1 SV=3
Length = 215
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR +GI KKA EI LC V +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGV---LCDAEVGVV 46
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K+E+K+IEN+ R +TFSKR SG+ KKA +E LC V I G + + N
Sbjct: 3 RGKVEVKRIENKITRQVTFSKRKSGLLKKA---YELSVLCDAEVSLIIFSTGGKLYEFSN 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLL 93
+ ++ Y + N L+ ND L
Sbjct: 60 VGVGRTIERYYRCKDNLLD---NDTL 82
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V + G + + N
Sbjct: 18 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALVIFSTRGRLYEYAN 74
Query: 68 DNIHPLVKAYSHA--------RINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
+++ ++ Y A + E N Q+ ++E + +Q+R ++ +
Sbjct: 75 NSVRGTIERYKKACSDAVNPPSVTEANTQY--------YQQEASKLRRQIRDIQNSNRHI 126
Query: 120 WETPVDELNLQELLQMDSAVDDLHQTFLAKINEKTAA 156
+ LN +EL ++ ++ +K NE A
Sbjct: 127 VGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVA 163
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +TFSKR G+ KKA E+ LC + I F +L
Sbjct: 3 RGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSV---LCDAELGLII--FSSSGKLFEY 57
Query: 67 ---NDNIHPLVKAY---SHARINELNQQH--NDLLRQLDE-EKEQQNMLKQM 109
+ ++ +++ Y S ARI E + QH ++ R +E EK Q N+ + M
Sbjct: 58 SSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMM 109
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TFSKR G+ KKA+E+ A+ LC V + G M + +
Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRGGLLKKANEL--AV-LCDARVGVVIFSSTGKMFEYCS 59
Query: 68 D--NIHPLVKAYSHA---RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
++ L++ Y HA E+N LL + E + + +RR
Sbjct: 60 PACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRR 108
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH 66
R KIE+K+IEN +R +T+SKR +GI KKA EI LC V I F ++H
Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISV---LCDAHVSVII--FASSGKMH 55
>sp|Q24535|SRF_DROME Serum response factor homolog OS=Drosophila melanogaster GN=bs PE=1
SV=2
Length = 449
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKTK R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 161 GKKTKGRVKIKMEYIDNKLRRYTTFSKRKTGIMKKAYEL 199
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHN 67
R KIE+K+I+N R +TFSKR SG++KKA E+ +I LC V + F S+L++
Sbjct: 3 RGKIEIKRIDNATSRQVTFSKRRSGLFKKAREL--SI-LCDAEVGLLV--FSSTSRLYD 56
>sp|Q9JM73|SRF_MOUSE Serum response factor OS=Mus musculus GN=Srf PE=1 SV=1
Length = 504
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 133 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 171
>sp|P11831|SRF_HUMAN Serum response factor OS=Homo sapiens GN=SRF PE=1 SV=1
Length = 508
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI-------------WEAIHL-- 47
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+ E H+
Sbjct: 137 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT 196
Query: 48 -----CQPSVKAIANRFLGMSQLHNDNIHPLVKAYSHARINELNQQHNDLLRQL---DEE 99
QP + + + L + L++ + P + R++ + DL Q+ D
Sbjct: 197 FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSS 256
Query: 100 KEQQNMLK 107
E ++ LK
Sbjct: 257 GETKDTLK 264
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R ++EMK+IEN+ +R +TFSKR +G+ KKA EI +I LC V I
Sbjct: 3 RGRVEMKRIENKINRQVTFSKRRAGLLKKAHEI--SI-LCDAEVSLIV 47
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R ++EMK+IEN+ +R +TFSKR +G+ KKA EI +I LC V I
Sbjct: 3 RGRVEMKRIENKINRQVTFSKRRAGLLKKAHEI--SI-LCDAEVSLIV 47
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var.
italica GN=CAL PE=2 SV=1
Length = 251
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R ++EMK+IEN+ +R +TFSKR +G+ KKA EI +I LC V I
Sbjct: 3 RGRVEMKRIENKINRQVTFSKRRAGLLKKAHEI--SI-LCDAEVSLIV 47
>sp|P23790|SRF_XENLA Serum response factor OS=Xenopus laevis GN=srf PE=2 SV=1
Length = 448
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 3 GKKTKRRQKIEMKKIENEDDRLITFSKRGSGIYKKASEI 41
GKKT+ R KI+M+ I+N+ R TFSKR +GI KKA E+
Sbjct: 92 GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYEL 130
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R ++EMK+IEN+ +R +TFSKR +G+ KKA EI +I LC V I
Sbjct: 3 RGRVEMKRIENKINRQVTFSKRRAGLLKKAHEI--SI-LCDAEVSLIV 47
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 14/111 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLHND 68
R ++E+KKIEN +R +TFSKR G+ KKA+E+ AI LC + I F G +++
Sbjct: 3 RGRVELKKIENPTNRQVTFSKRRMGLLKKANEL--AI-LCDAQIGVIV--FSGTGKMYEY 57
Query: 69 NIHP-----LVKAYSHA---RINELNQQHNDLLRQLDEEKEQQNMLKQMRR 111
+ P + Y A R E++ Q +++++ K++ N L+ + R
Sbjct: 58 SSPPWRIANIFDRYLKAPSTRFEEMDVQQR-IIQEMTRMKDENNRLRIIMR 107
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R KIE+K+IEN + R +TFSKR +G+ KKA E+ LC V I
Sbjct: 3 RGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSV---LCDAEVAVIV 47
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIA 56
R ++EMK+IEN+ +R +TFSKR +G+ KKA EI +I LC V I
Sbjct: 3 RGRVEMKRIENKINRQVTFSKRRAGLLKKAHEI--SI-LCDAEVSLIV 47
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R K +MK+IEN R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVSLIIFSPKGKLYEFAS 59
Query: 68 DNIHPLVKAY--------SHARINELNQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRW 119
N+ + Y S ++E N QH E NM+K++ +++ ++ +
Sbjct: 60 SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKY--------EAANMMKKIEQLEASKRKL 111
Query: 120 WETPVDELNLQELLQMDSAVD 140
+ +++EL Q++ ++
Sbjct: 112 LGEGIGTCSIEELQQIEQQLE 132
>sp|Q07472|MADS1_PETHY Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2
SV=1
Length = 231
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KI++K+IEN+ +R +T+SKR +G++KKA+E+ LC V I
Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKANEL---TVLCDAKVSII 46
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAI 55
R KIE+K+IEN +R +TFSKR G+ KKA+E+ A+ LC V +
Sbjct: 3 RGKIEIKRIENATNRQVTFSKRRGGLLKKANEL--AV-LCDARVGVV 46
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 75
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 76 NSVKATIERYKKA 88
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R KIE+K+IEN +R +T+SKR +GI KKA E+ LC V I F + H
Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRTGIMKKAREL---TVLCDAQVAIIM--FSSTGKYHEF 57
Query: 67 ---NDNIHPLVKAYSHARINEL-NQQHNDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ +I + Y A L +Q+ ++ R L K+ L+ E + R E
Sbjct: 58 CSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLR-----TEIRQRMGE- 111
Query: 123 PVDELNLQELLQMDSAVD 140
+D L EL ++ VD
Sbjct: 112 DLDGLEFDELRGLEQNVD 129
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYAN 75
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 76 NSVKATIERYKKA 88
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSSRGRLYEYSN 75
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 76 NSVKGTIERYKKA 88
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R ++E+K+IEN+ +R +TFSKR +G+ KKA +E LC V I G + + +
Sbjct: 3 RGRVELKRIENKINRQVTFSKRRNGLLKKA---YELSVLCDAEVALIIFSSRGKLYEFGS 59
Query: 68 DNIHPLVKAYSHARINELNQQHNDLLRQLDEEKEQQNMLK-QMRRVKETQPRWWETPVDE 126
I ++ Y H N Q N+ L + + + LK + ++ TQ +
Sbjct: 60 AGITKTLERYQHCCYNA--QDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGP 117
Query: 127 LNLQELLQMDSAVD 140
L+++EL Q++ ++
Sbjct: 118 LSVKELQQLEKQLE 131
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLG-MSQLHN 67
R KIE+K+IEN +R +TF KR +G+ KKA +E LC V I G + + N
Sbjct: 19 RGKIEIKRIENTTNRQVTFCKRRNGLLKKA---YELSVLCDAEVALIVFSTRGRLYEYAN 75
Query: 68 DNIHPLVKAYSHA 80
+++ ++ Y A
Sbjct: 76 NSVKGTIERYKKA 88
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 9 RQKIEMKKIENEDDRLITFSKRGSGIYKKASEIWEAIHLCQPSVKAIANRFLGMSQLH-- 66
R K EMK+IEN R +TFSKR +G+ KKA +E LC V I F +L+
Sbjct: 3 RGKTEMKRIENATSRQVTFSKRRNGLLKKA---FELSVLCDAEVALII--FSPRGKLYEF 57
Query: 67 --NDNIHPLVKAYSHARINELNQQH--NDLLRQLDEEKEQQNMLKQMRRVKETQPRWWET 122
+ +I V+ Y RI +L H ND +Q + E + +++ ++ + +
Sbjct: 58 SSSSSIPKTVERY-QKRIQDLGSNHKRNDNSQQ--SKDETYGLARKIEHLEISTRKMMGE 114
Query: 123 PVDELNLQELLQMDSAVD 140
+D +++EL Q+++ +D
Sbjct: 115 GLDASSIEELQQLENQLD 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,227,150
Number of Sequences: 539616
Number of extensions: 2284010
Number of successful extensions: 11860
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 11578
Number of HSP's gapped (non-prelim): 382
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)