BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043114
(264 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C7T|A Chain A, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|B Chain B, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|C Chain C, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|D Chain D, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
Length = 263
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 46 DAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEGYADGIDAPP 105
D LT LGW Q + + + G++ I+ V SP LR ++TA +G+ DG+ A P
Sbjct: 57 DTPLTRLGWFQAQLVGEGMRMAGVS--IKHVYASPALRCVETA------QGFLDGLRADP 108
>pdb|2AXN|A Chain A, Crystal Structure Of The Human Inducible Form 6-
Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
pdb|2DWO|A Chain A, Pfkfb3 In Complex With Adp And Pep
pdb|2DWP|A Chain A, A Pseudo Substrate Complex Of 6-Phosphofructo-2-Kinase Of
Pfkfb
pdb|2I1V|B Chain B, Crystal Structure Of Pfkfb3 In Complex With Adp And
Fructose-2,6-Bisphosphate
pdb|3QPU|A Chain A, Pfkfb3 In Complex With Ppi
pdb|3QPV|A Chain A, Pfkfb3 Trapped In A Phospho-Enzyme Intermediate State
pdb|3QPW|A Chain A, Pfkfb3 In Complex With Aluminum Tetrafluoride
Length = 520
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIEL 75
+TI+L RH + HN++G D+ LS G + S L K V E L K
Sbjct: 247 RTIYLCRHGENEHNLQGRIGGDSGLS---------SRGKKFASALSKFVEEQNL--KDLR 295
Query: 76 VITSPLLRTMQTA 88
V TS L T+QTA
Sbjct: 296 VWTSQLKSTIQTA 308
>pdb|3EI1|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4
Photoproduct Containing Dna-Duplex
pdb|3EI2|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
Containing Dna-Duplex
pdb|3EI3|B Chain B, Structure Of The Hsddb1-Drddb2 Complex
Length = 383
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 112 GNSNHAAISSLNSPPFI-AVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDIL 170
G S HA + PFI +++ + H P D+R + E+ P + D IL
Sbjct: 41 GQSIHAQLRQCLQEPFIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIIL 100
Query: 171 WTADVREANEEV-------AKRGMKF 189
W DV+ + A GMKF
Sbjct: 101 WDYDVQNKTSFIQGMGPGDAITGMKF 126
>pdb|4A08|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
pdb|4A09|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
(Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
pdb|4A0A|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
pdb|4A0B|B Chain B, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
pdb|4A0B|D Chain D, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
pdb|4A0K|D Chain D, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
pdb|4A0L|B Chain B, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
pdb|4A0L|D Chain D, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 382
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 112 GNSNHAAISSLNSPPFI-AVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDIL 170
G S HA + PFI +++ + H P D+R + E+ P + D IL
Sbjct: 40 GQSIHAQLRQCLQEPFIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIIL 99
Query: 171 WTADVREANEEV-------AKRGMKF 189
W DV+ + A GMKF
Sbjct: 100 WDYDVQNKTSFIQGMGPGDAITGMKF 125
>pdb|1PQ3|A Chain A, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|B Chain B, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|C Chain C, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|D Chain D, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|E Chain E, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
pdb|1PQ3|F Chain F, Human Arginase Ii: Crystal Structure And Physiological
Role In Male And Female Sexual Arousal
Length = 306
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 32 GEKNHDAYLSYDL--FDAHLTP---------LGWQQVSNLHKHVHETGLAKKIELVITSP 80
G++ +LS+D+ FD L P L +++ + + +H TGL ++LV +P
Sbjct: 217 GKRQRPIHLSFDIDAFDPTLAPATGTPVVGGLTYREGMYIAEEIHNTGLLSALDLVEVNP 276
Query: 81 LLRTMQ 86
L T +
Sbjct: 277 QLATSE 282
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a
Protein, New York Structural Genomics Consortium
pdb|1YGA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Yn9a
Protein, New York Structural Genomics Consortium
Length = 342
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 102 DAP-PLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVH 140
D P L V + GN+NH++ISSLN + A + GV+
Sbjct: 79 DGPHKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVY 118
>pdb|3F2I|A Chain A, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|B Chain B, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|C Chain C, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|D Chain D, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|E Chain E, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422.
pdb|3F2I|F Chain F, Crystal Structure Of The Alr0221 Protein From Nostoc,
Northeast Structural Genomics Consortium Target Nsr422
Length = 172
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 18 IHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVI 77
++L+RH G K+ + L+ + G Q+ + + L ++ +L++
Sbjct: 3 LYLIRHGIAEAQKTGIKDEERELTQE---------GKQKTEKVAYRL--VKLGRQFDLIV 51
Query: 78 TSPLLRTMQTA 88
TSPL+R QTA
Sbjct: 52 TSPLIRARQTA 62
>pdb|3I9K|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad
pdb|3I9K|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad
pdb|3I9L|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
N1-Cidpr
pdb|3I9L|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
N1-Cidpr
Length = 258
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 140 HPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEK 199
+PCD + YK F + L N + W+ EA++ A G K++ T ++
Sbjct: 49 NPCD--LDLGSYKDFFTSAQQQL-PKNKVMFWSGVYDEAHD-YANTGRKYI----TLED- 99
Query: 200 EIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240
T G++ ++L G +P ++C F C +++
Sbjct: 100 -----TLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQA 135
>pdb|3ZWM|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|C Chain C, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|D Chain D, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|E Chain E, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|F Chain F, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|G Chain G, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWM|H Chain H, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Substrate Nad And Product Cadpr
pdb|3ZWN|A Chain A, Crystal Structure Of Aplysia Cyclase Complexed With
Substrate Ngd And Product Cgdpr
pdb|3ZWN|B Chain B, Crystal Structure Of Aplysia Cyclase Complexed With
Substrate Ngd And Product Cgdpr
pdb|3ZWP|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|C Chain C, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|D Chain D, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|E Chain E, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|F Chain F, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|G Chain G, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWP|H Chain H, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ara- 2'f-Adp-Ribose At 2.1 Angstrom
pdb|3ZWV|A Chain A, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|B Chain B, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|C Chain C, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|D Chain D, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|E Chain E, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|F Chain F, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|G Chain G, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWV|H Chain H, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|A Chain A, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|B Chain B, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|C Chain C, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|D Chain D, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|E Chain E, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|F Chain F, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|G Chain G, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWW|H Chain H, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With
Ara-2'f-Adp-Ribose At 2.3 Angstrom
pdb|3ZWX|A Chain A, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|B Chain B, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|C Chain C, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|D Chain D, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|E Chain E, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|F Chain F, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|G Chain G, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWX|H Chain H, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose
pdb|3ZWY|A Chain A, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|B Chain B, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|C Chain C, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|D Chain D, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|E Chain E, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|F Chain F, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|G Chain G, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
pdb|3ZWY|H Chain H, Crystal Structure Of Adp-Ribosyl Cyclase Complexed With 8-
Bromo-Adp-Ribose And Cyclic 8-Bromo-Cyclic-Adp-Ribose
Length = 260
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 140 HPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEK 199
+PCD + YK F + L N + W+ EA++ A G K++ T ++
Sbjct: 51 NPCD--LDLGSYKDFFTSAQQQL-PKNKVMFWSGVYDEAHD-YANTGRKYI----TLED- 101
Query: 200 EIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240
T G++ ++L G +P ++C F C +++
Sbjct: 102 -----TLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQA 137
>pdb|1R0S|A Chain A, Crystal Structure Of Adp-Ribosyl Cyclase Glu179ala Mutant
pdb|1R0S|B Chain B, Crystal Structure Of Adp-Ribosyl Cyclase Glu179ala Mutant
Length = 258
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 140 HPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEK 199
+PCD + YK F + L N + W+ EA++ A G K++ T ++
Sbjct: 49 NPCD--LDLGSYKDFFTSAQQQL-PKNKVMFWSGVYDEAHD-YANTGRKYI----TLED- 99
Query: 200 EIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240
T G++ ++L G +P ++C F C +++
Sbjct: 100 -----TLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQA 135
>pdb|3ZWO|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|C Chain C, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|D Chain D, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|E Chain E, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|F Chain F, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|G Chain G, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
pdb|3ZWO|H Chain H, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Reaction Intermediate
Length = 259
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 140 HPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEK 199
+PCD + YK F + L N + W+ EA++ A G K++ T ++
Sbjct: 50 NPCD--LDLGSYKDFFTSAQQQL-PKNKVMFWSGVYDEAHD-YANTGRKYI----TLED- 100
Query: 200 EIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240
T G++ ++L G +P ++C F C +++
Sbjct: 101 -----TLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQA 136
>pdb|1LBE|A Chain A, Aplysia Adp Ribosyl Cyclase
pdb|1LBE|B Chain B, Aplysia Adp Ribosyl Cyclase
pdb|1R12|A Chain A, Native Aplysia Adp Ribosyl Cyclase
pdb|1R12|B Chain B, Native Aplysia Adp Ribosyl Cyclase
pdb|1R15|A Chain A, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|B Chain B, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|C Chain C, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|D Chain D, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|E Chain E, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|F Chain F, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|G Chain G, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R15|H Chain H, Aplysia Adp Ribosyl Cyclase With Bound Nicotinamide And
R5p
pdb|1R16|A Chain A, Aplysia Adp Ribosyl Cyclase With Bound Pyridylcarbinol And
R5p
pdb|1R16|B Chain B, Aplysia Adp Ribosyl Cyclase With Bound Pyridylcarbinol And
R5p
pdb|3I9J|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With A
Substrate Analog And A Product Nicotinamide
pdb|3I9J|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With A
Substrate Analog And A Product Nicotinamide
pdb|3I9O|A Chain A, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ribo-2'f-Adp Ribose
pdb|3I9O|B Chain B, Crystal Structure Of Adp Ribosyl Cyclase Complexed With
Ribo-2'f-Adp Ribose
Length = 258
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 140 HPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEK 199
+PCD + YK F + L N + W+ EA++ A G K++ T ++
Sbjct: 49 NPCD--LDLGSYKDFFTSAQQQL-PKNKVMFWSGVYDEAHD-YANTGRKYI----TLED- 99
Query: 200 EIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240
T G++ ++L G +P ++C F C +++
Sbjct: 100 -----TLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQA 135
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,160,827
Number of Sequences: 62578
Number of extensions: 322536
Number of successful extensions: 668
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 13
length of query: 264
length of database: 14,973,337
effective HSP length: 97
effective length of query: 167
effective length of database: 8,903,271
effective search space: 1486846257
effective search space used: 1486846257
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)