Query 043114
Match_columns 264
No_of_seqs 127 out of 1243
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 13:00:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043114.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043114hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4754 Predicted phosphoglyce 100.0 3.9E-44 8.4E-49 290.9 18.5 244 1-264 1-244 (248)
2 PRK14116 gpmA phosphoglyceromu 100.0 1.4E-36 3E-41 259.5 17.7 196 15-249 1-222 (228)
3 PRK14119 gpmA phosphoglyceromu 100.0 3.1E-36 6.8E-41 257.4 17.2 193 15-246 1-219 (228)
4 PRK14117 gpmA phosphoglyceromu 100.0 2.7E-35 5.8E-40 251.8 17.1 193 15-246 1-219 (230)
5 PRK13462 acid phosphatase; Pro 100.0 6E-35 1.3E-39 245.1 18.9 198 13-263 3-201 (203)
6 PRK13463 phosphatase PhoE; Pro 100.0 2.5E-35 5.3E-40 247.7 15.4 188 15-247 2-190 (203)
7 PRK14118 gpmA phosphoglyceromu 100.0 8.3E-35 1.8E-39 248.4 16.9 192 16-246 1-218 (227)
8 PRK03482 phosphoglycerate muta 100.0 1.7E-34 3.6E-39 244.7 17.7 186 15-246 1-187 (215)
9 PRK01112 phosphoglyceromutase; 100.0 2.5E-34 5.4E-39 245.3 17.2 209 15-247 1-219 (228)
10 PRK01295 phosphoglyceromutase; 100.0 4.1E-34 8.9E-39 240.7 17.7 193 15-248 2-197 (206)
11 PRK15004 alpha-ribazole phosph 100.0 2.2E-34 4.9E-39 241.1 16.0 185 16-246 1-186 (199)
12 PRK14120 gpmA phosphoglyceromu 100.0 5.1E-34 1.1E-38 246.1 17.9 194 14-246 3-220 (249)
13 PRK14115 gpmA phosphoglyceromu 100.0 8.5E-34 1.9E-38 244.7 17.7 193 16-247 1-219 (247)
14 TIGR01258 pgm_1 phosphoglycera 100.0 5.7E-34 1.2E-38 245.5 16.6 192 16-246 1-218 (245)
15 TIGR03162 ribazole_cobC alpha- 100.0 4.8E-34 1E-38 234.5 14.7 176 18-241 1-177 (177)
16 TIGR03848 MSMEG_4193 probable 100.0 1.3E-33 2.8E-38 237.4 16.0 183 17-247 1-190 (204)
17 COG0406 phoE Broad specificity 100.0 7.5E-33 1.6E-37 233.2 18.7 191 14-248 1-192 (208)
18 PRK07238 bifunctional RNase H/ 100.0 2.9E-31 6.4E-36 242.2 18.6 187 14-246 170-357 (372)
19 PF00300 His_Phos_1: Histidine 100.0 1.6E-30 3.5E-35 208.4 7.4 156 17-213 1-158 (158)
20 smart00855 PGAM Phosphoglycera 100.0 6.1E-29 1.3E-33 199.9 12.2 152 17-213 1-155 (155)
21 KOG0235 Phosphoglycerate mutas 100.0 7.2E-28 1.6E-32 200.3 16.6 195 14-247 4-202 (214)
22 PTZ00123 phosphoglycerate muta 100.0 9.1E-28 2E-32 206.1 15.5 180 28-246 1-206 (236)
23 PTZ00322 6-phosphofructo-2-kin 100.0 1.9E-27 4.2E-32 231.1 17.3 203 15-246 419-627 (664)
24 PTZ00122 phosphoglycerate muta 99.9 4.8E-26 1E-30 201.1 16.1 164 16-246 103-277 (299)
25 COG0588 GpmA Phosphoglycerate 99.9 1.7E-26 3.7E-31 188.8 10.9 194 15-247 1-220 (230)
26 cd07067 HP_PGM_like Histidine 99.9 4.3E-25 9.2E-30 176.8 14.6 143 17-246 1-144 (153)
27 cd07040 HP Histidine phosphata 99.9 1.1E-21 2.4E-26 156.3 13.8 141 17-246 1-144 (153)
28 TIGR00249 sixA phosphohistidin 99.8 2.5E-19 5.4E-24 143.8 16.1 141 16-246 1-141 (152)
29 KOG3734 Predicted phosphoglyce 99.8 1.5E-19 3.3E-24 154.7 14.4 172 14-219 11-215 (272)
30 PRK10848 phosphohistidine phos 99.8 8.7E-19 1.9E-23 141.6 14.9 139 16-244 1-139 (159)
31 PRK06193 hypothetical protein; 99.8 4.2E-18 9.2E-23 142.2 13.9 134 14-217 41-174 (206)
32 KOG4609 Predicted phosphoglyce 99.7 2.4E-17 5.2E-22 134.9 11.9 165 14-247 93-263 (284)
33 COG2062 SixA Phosphohistidine 99.7 1.1E-16 2.3E-21 128.4 13.3 143 15-246 1-143 (163)
34 PRK15416 lipopolysaccharide co 99.7 4.3E-16 9.2E-21 129.1 14.0 69 14-93 53-121 (201)
35 KOG0234 Fructose-6-phosphate 2 99.7 2.4E-15 5.3E-20 136.0 15.4 159 15-221 239-398 (438)
36 cd07061 HP_HAP_like Histidine 98.0 9.7E-06 2.1E-10 69.6 5.6 63 15-95 3-73 (242)
37 PF00328 His_Phos_2: Histidine 97.3 0.00026 5.6E-09 63.2 4.7 50 47-96 61-117 (347)
38 KOG3720 Lysosomal & prostatic 96.6 0.01 2.3E-07 55.1 8.5 83 14-98 34-130 (411)
39 PRK10173 glucose-1-phosphatase 96.2 0.023 5E-07 52.8 8.2 79 14-95 31-128 (413)
40 PRK10172 phosphoanhydride phos 95.4 0.071 1.5E-06 49.8 8.2 82 14-95 34-130 (436)
41 KOG1057 Arp2/3 complex-interac 92.4 0.12 2.7E-06 50.6 3.4 51 47-97 510-573 (1018)
42 KOG1382 Multiple inositol poly 84.2 2 4.3E-05 40.2 5.2 55 43-97 127-184 (467)
43 KOG3672 Histidine acid phospha 60.1 13 0.00028 34.2 4.0 44 48-91 168-222 (487)
44 PF12048 DUF3530: Protein of u 55.7 24 0.00053 31.5 5.1 41 180-220 174-214 (310)
45 PF14606 Lipase_GDSL_3: GDSL-l 48.9 17 0.00036 29.8 2.7 31 178-208 72-103 (178)
46 PRK14484 phosphotransferase ma 46.2 24 0.00052 27.1 3.1 39 201-251 4-43 (124)
47 COG0529 CysC Adenylylsulfate k 41.4 2.1E+02 0.0045 23.8 8.1 47 46-94 69-119 (197)
48 PRK00865 glutamate racemase; P 39.1 1.2E+02 0.0026 26.2 6.7 59 147-208 20-78 (261)
49 COG1136 SalX ABC-type antimicr 38.0 62 0.0013 27.6 4.6 34 181-214 176-209 (226)
50 KOG2728 Uncharacterized conser 34.7 33 0.00072 29.7 2.4 35 177-211 9-43 (302)
51 COG1134 TagH ABC-type polysacc 34.6 59 0.0013 28.1 4.0 29 180-209 180-208 (249)
52 PF09370 TIM-br_sig_trns: TIM- 32.6 35 0.00076 29.8 2.3 36 176-212 191-226 (268)
53 COG1116 TauB ABC-type nitrate/ 32.2 64 0.0014 27.9 3.8 35 180-214 163-197 (248)
54 PRK00035 hemH ferrochelatase; 32.0 1.5E+02 0.0033 26.5 6.5 33 180-212 170-203 (333)
55 PF05990 DUF900: Alpha/beta hy 31.6 1.2E+02 0.0025 25.8 5.4 41 177-217 70-111 (233)
56 PLN02517 phosphatidylcholine-s 30.1 71 0.0015 31.4 4.1 36 175-210 188-224 (642)
57 PRK12435 ferrochelatase; Provi 29.6 2E+02 0.0043 25.7 6.7 22 46-67 52-73 (311)
58 COG4525 TauB ABC-type taurine 29.0 65 0.0014 27.3 3.2 34 181-214 166-199 (259)
59 cd04256 AAK_P5CS_ProBA AAK_P5C 27.3 66 0.0014 28.3 3.2 30 181-211 31-60 (284)
60 PF02450 LCAT: Lecithin:choles 26.8 74 0.0016 29.3 3.6 40 178-217 98-140 (389)
61 PLN02449 ferrochelatase 26.6 1.6E+02 0.0036 28.1 5.8 44 46-93 155-202 (485)
62 COG2893 ManX Phosphotransferas 26.1 76 0.0016 25.0 3.0 19 200-218 3-21 (143)
63 cd00006 PTS_IIA_man PTS_IIA, P 25.4 74 0.0016 23.9 2.8 18 200-217 2-19 (122)
64 KOG3734 Predicted phosphoglyce 25.1 20 0.00042 31.5 -0.5 50 46-96 40-90 (272)
65 PF05060 MGAT2: N-acetylglucos 25.1 1.8E+02 0.0038 26.7 5.5 48 186-246 46-95 (356)
66 PF13479 AAA_24: AAA domain 24.8 1E+02 0.0022 25.6 3.8 36 176-211 105-140 (213)
67 PF03610 EIIA-man: PTS system 24.8 57 0.0012 24.2 2.0 18 200-217 1-18 (116)
68 TIGR03729 acc_ester putative p 24.4 1.3E+02 0.0029 25.2 4.5 39 176-214 141-180 (239)
69 cd07397 MPP_DevT Myxococcus xa 23.7 79 0.0017 27.2 2.9 34 177-212 127-160 (238)
70 cd03255 ABC_MJ0796_Lo1CDE_FtsE 22.7 1.3E+02 0.0027 24.8 4.0 29 181-209 174-202 (218)
71 TIGR00067 glut_race glutamate 22.6 3.5E+02 0.0075 23.2 6.8 56 148-206 14-70 (251)
72 cd03229 ABC_Class3 This class 22.3 1.4E+02 0.003 23.8 4.1 29 181-209 134-162 (178)
73 cd03237 ABC_RNaseL_inhibitor_d 21.7 1.3E+02 0.0027 25.7 3.8 30 181-210 149-178 (246)
74 COG4107 PhnK ABC-type phosphon 21.4 1.9E+02 0.0042 24.1 4.5 36 180-215 184-219 (258)
75 cd03222 ABC_RNaseL_inhibitor T 21.3 1.7E+02 0.0036 23.7 4.3 30 181-210 105-134 (177)
76 COG1121 ZnuC ABC-type Mn/Zn tr 21.1 1.2E+02 0.0027 26.3 3.6 26 183-209 175-200 (254)
77 cd03293 ABC_NrtD_SsuB_transpor 21.1 1.4E+02 0.003 24.6 3.9 29 181-209 165-193 (220)
78 COG1122 CbiO ABC-type cobalt t 20.9 1.3E+02 0.0027 25.8 3.6 31 181-211 172-202 (235)
79 cd03267 ABC_NatA_like Similar 20.7 1.6E+02 0.0034 24.8 4.2 29 181-209 187-215 (236)
80 TIGR02211 LolD_lipo_ex lipopro 20.1 1.5E+02 0.0033 24.3 4.0 29 181-209 175-203 (221)
81 cd03259 ABC_Carb_Solutes_like 20.0 1.5E+02 0.0033 24.2 3.9 29 181-209 164-192 (213)
No 1
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-44 Score=290.86 Aligned_cols=244 Identities=57% Similarity=0.919 Sum_probs=218.7
Q ss_pred CCCCCCCcccccceeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECc
Q 043114 1 MDTAAGTSLYPFHRSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSP 80 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSp 80 (264)
|++- |..++|..+.|+||||||||..||+.+...|+.||+..+.|+.||+.|++|+.++++.+.+.++..+++.|++||
T Consensus 1 ~e~~-~i~l~t~~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SP 79 (248)
T KOG4754|consen 1 METY-GIGLYTKNRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSP 79 (248)
T ss_pred CCcc-ccCccccCcceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEech
Confidence 7788 999999999999999999999999999999999999999999999999999999999999888877899999999
Q ss_pred hhhHHHHHHHhhCCCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCc
Q 043114 81 LLRTMQTAVGVFGGEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINF 160 (264)
Q Consensus 81 l~Ra~qTA~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~ 160 (264)
|+||+||+.+.+......+.....|++++ ++++. .+||.+|.++|+.|.....++..||.+||
T Consensus 80 MrRtLqT~v~~f~~~~~e~g~~~~p~~vs---------------p~~i~--~~rE~lG~hpCD~r~~v~~~~~lfp~~DF 142 (248)
T KOG4754|consen 80 MRRTLQTMVIAFGGYLAEDGEDPAPVKVS---------------PPFIA--VCRETLGDHPCDRRSSVTDLMKLFPAYDF 142 (248)
T ss_pred HHHHHHHHHHHhcceeccCCCcCCceeec---------------chHHH--HHHHHhCCCcccccchhHHHHhhcccccc
Confidence 99999999999988655555445555541 23332 27999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEE
Q 043114 161 SLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRS 240 (264)
Q Consensus 161 ~~~~~~~~~~w~~~~~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~ 240 (264)
+...++.+..|.+...|+.++...|-..+++++.+++.+.|.||||+++|+.+++.+...++..+..+ ...+.||+...
T Consensus 143 s~~~~dv~~~~~pdy~ed~e~~a~r~re~~~~l~~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~-~~~~~Nce~r~ 221 (248)
T KOG4754|consen 143 SLCETDVDPLKKPDYREDDEESAARSREFLEWLAKRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPE-ILSFSNCEHRS 221 (248)
T ss_pred eeeccCcchhccCcchhhHHHHHHhHHHHHHHHHhCccceEEEEEehHHHHHHHHHhccccCcccchh-hhccCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999988887755433 44559999999
Q ss_pred EEEeeccccCCCCCCCcCCCCCCC
Q 043114 241 MVIVDRSMIGSDAPTTNYPGKIPS 264 (264)
Q Consensus 241 ~~~~d~~~~~~~~~~~~~~~~~~~ 264 (264)
|.+.|...++++. .+|||+++|.
T Consensus 222 ~~i~Dr~~~~~d~-~~n~p~~~~~ 244 (248)
T KOG4754|consen 222 FVIVDRGMLGTDS-VTNVPGKIAD 244 (248)
T ss_pred eeEeeeeeecccc-ceecCCcccC
Confidence 9999999999998 9999999873
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-36 Score=259.55 Aligned_cols=196 Identities=15% Similarity=0.073 Sum_probs=154.4
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++|||||||||.+|..++++ |+.|.|||+.|++||+++++.|++.++ +||+|||||+.||+|||+++++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~-------G~~D~pLt~~G~~QA~~l~~~L~~~~~--~~d~i~sSpL~Ra~qTA~~i~~~ 71 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFT-------GWVDVDLSEKGVEEAKKAGRLIKEAGL--EFDQAYTSVLTRAIKTLHYALEE 71 (228)
T ss_pred CCEEEEEeCCCCCCccccCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEECChHHHHHHHHHHHHh
Confidence 578999999999999998876 889999999999999999999986433 79999999999999999998764
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCC-------
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESND------- 167 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~------- 167 (264)
.... ..++.+++.|+|+ .++.++|++..++.+.||...+..+....
T Consensus 72 ~~~~-------------------------~~~~~~~~~LrE~--~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~ 124 (228)
T PRK14116 72 SDQL-------------------------WIPETKTWRLNER--HYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLL 124 (228)
T ss_pred cCcC-------------------------CCCcccCcccccc--cchhhcCCCHHHHHHHhhhhHHHHHhhcccccCccc
Confidence 2110 0245677899998 57889999999999988853222221110
Q ss_pred ----------------CCCCCCCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccc
Q 043114 168 ----------------DILWTADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSE 228 (264)
Q Consensus 168 ----------------~~~w~~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~ 228 (264)
...+.+++|||+.++.+|+..+++.+.. ..+++|||||||++|+++++.+.+.....+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~--- 201 (228)
T PRK14116 125 DADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDI--- 201 (228)
T ss_pred ccccccccccchhhhccCccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHH---
Confidence 0013457899999999999999998653 356899999999999999998865433322
Q ss_pred cccCccCceEEEEEEeecccc
Q 043114 229 ICTHFANCELRSMVIVDRSMI 249 (264)
Q Consensus 229 ~~~~~~n~~v~~~~~~d~~~~ 249 (264)
..+.++||+++.+++++..-+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~ 222 (228)
T PRK14116 202 MNLEMATGEPVVYDFDEKLNV 222 (228)
T ss_pred HhccCCCCCeEEEEECCCCCc
Confidence 356899999999999987643
No 3
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.1e-36 Score=257.43 Aligned_cols=193 Identities=15% Similarity=0.101 Sum_probs=151.5
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++|||||||||.+|..++++ |+.|.|||+.|++||+++++.|++.+. ++++||||||+||+|||+++++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~-------G~~D~pLt~~G~~QA~~l~~~L~~~~~--~~d~i~sSpL~Ra~~TA~~i~~~ 71 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFT-------GWEDVNLSEQGINEATRAGEKVRENNI--AIDVAFTSLLTRALDTTHYILTE 71 (228)
T ss_pred CCEEEEEeCCCCCcccCCCcc-------CCCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEeCccHHHHHHHHHHHHh
Confidence 578999999999999998876 889999999999999999999986433 79999999999999999998764
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCC------
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDD------ 168 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~------ 168 (264)
... ...++.++++|+|+ .++.++|++.+++.+.||...+..|....+
T Consensus 72 ~~~-------------------------~~~~~~~~~~LrE~--~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~ 124 (228)
T PRK14119 72 SKQ-------------------------QWIPVYKSWRLNER--HYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAE 124 (228)
T ss_pred ccc-------------------------CCCCeeECCCcccc--ccccccCCcHHHHHHHccHHHHHHHHcccccCCCcc
Confidence 211 01356678899998 577899999999999988521222221100
Q ss_pred -----------------CCCCCCcccCHHHHHHHHHHHHHHHHcC---CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccc
Q 043114 169 -----------------ILWTADVREANEEVAKRGMKFVNWLWTR---KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSE 228 (264)
Q Consensus 169 -----------------~~w~~~~~Es~~~~~~R~~~~l~~l~~~---~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~ 228 (264)
....+++|||+.++.+|+..+++.+... ++++|||||||++|+++++.+.+.....+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~--- 201 (228)
T PRK14119 125 TEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDI--- 201 (228)
T ss_pred cccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHH---
Confidence 0012367999999999999999997542 56789999999999999998865432222
Q ss_pred cccCccCceEEEEEEeec
Q 043114 229 ICTHFANCELRSMVIVDR 246 (264)
Q Consensus 229 ~~~~~~n~~v~~~~~~d~ 246 (264)
..+.++||+++.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14119 202 INYEIKTGAPLVYELTDD 219 (228)
T ss_pred hhcCCCCCceEEEEECCC
Confidence 245789999999999887
No 4
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.7e-35 Score=251.83 Aligned_cols=193 Identities=15% Similarity=0.059 Sum_probs=149.6
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++|||||||+|.+|..++++ ++.|.|||+.|++||+.+++.|++.++ ++++|||||++||+|||++++..
T Consensus 1 m~~l~LvRHG~t~~n~~~~~q-------G~~D~~Lt~~G~~qa~~~~~~l~~~~~--~~~~i~sSpl~Ra~~TA~~i~~~ 71 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFT-------GWADVDLSEKGTQQAIDAGKLIKEAGI--EFDLAFTSVLKRAIKTTNLALEA 71 (230)
T ss_pred CCEEEEEeCccccCcccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHHcCC--CCCEEEECCcHHHHHHHHHHHHh
Confidence 678999999999999998886 889999999999999999999985333 79999999999999999987642
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCC-------
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESND------- 167 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~------- 167 (264)
... ...++.+++.|+|+ .++.|+|++.+++.+.||...+..+....
T Consensus 72 ~~~-------------------------~~~~~~~~~~LrE~--~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~ 124 (230)
T PRK14117 72 SDQ-------------------------LWVPVEKSWRLNER--HYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAM 124 (230)
T ss_pred ccc-------------------------CCCCceeCCccccc--cchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcc
Confidence 110 01356678899998 57889999999999998852122121100
Q ss_pred ----------------CCCCCCCcccCHHHHHHHHHHHHHHHH-c-C-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccc
Q 043114 168 ----------------DILWTADVREANEEVAKRGMKFVNWLW-T-R-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSE 228 (264)
Q Consensus 168 ----------------~~~w~~~~~Es~~~~~~R~~~~l~~l~-~-~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~ 228 (264)
.....+++|||..++.+|+..+++.+. . . .+++|||||||++|++++..+.+......
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~--- 201 (230)
T PRK14117 125 AKDDEYSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEI--- 201 (230)
T ss_pred cccccccccccccccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHH---
Confidence 001235689999999999999999975 2 2 35789999999999999998865432212
Q ss_pred cccCccCceEEEEEEeec
Q 043114 229 ICTHFANCELRSMVIVDR 246 (264)
Q Consensus 229 ~~~~~~n~~v~~~~~~d~ 246 (264)
..+.++||+++.+++++.
T Consensus 202 ~~~~~~n~s~~~i~~~~~ 219 (230)
T PRK14117 202 MDVEIPNFPPLVFEFDEK 219 (230)
T ss_pred hhcCCCCceEEEEEECCC
Confidence 245799999999999555
No 5
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=6e-35 Score=245.14 Aligned_cols=198 Identities=17% Similarity=0.102 Sum_probs=156.1
Q ss_pred ceeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhh
Q 043114 13 HRSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVF 92 (264)
Q Consensus 13 ~~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~ 92 (264)
.+|++|||||||||.+|..++++ +..|.|||+.|++||+.+++.|+...+ .++.|||||++||+|||+.+
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~-------G~~d~pLt~~G~~QA~~l~~~l~~~~~--~~~~i~sSpl~Ra~qTA~~i- 72 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHT-------GRTELELTETGRTQAELAGQALGELEL--DDPLVISSPRRRALDTAKLA- 72 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCcc-------CCCCCCCCHHHHHHHHHHHHHHHhCCC--CCCEEEECchHHHHHHHHHh-
Confidence 37899999999999999988876 788999999999999999999986422 33389999999999999976
Q ss_pred CCCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCC
Q 043114 93 GGEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWT 172 (264)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~ 172 (264)
+. ....+++.|+|+ .++.++|.+..++.+.||.+ ..+. ..
T Consensus 73 -~~-----------------------------~~~~~~~~LrE~--~~G~~eG~~~~ei~~~~~~~--~~~~------~~ 112 (203)
T PRK13462 73 -GL-----------------------------TVDEVSGLLAEW--DYGSYEGLTTPQIRESEPDW--LVWT------HG 112 (203)
T ss_pred -cC-----------------------------cccccCcccccc--CCccccCCcHHHHHHhCchH--Hhhc------CC
Confidence 11 112457789998 46788999999999998853 2221 11
Q ss_pred CCcccCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeeccccCC
Q 043114 173 ADVREANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRSMIGS 251 (264)
Q Consensus 173 ~~~~Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~~~~~ 251 (264)
.+++||++++.+|+..+++.+... .+++|||||||++|++++..+.+.....+ ..+.++||+++.+++.++...-.
T Consensus 113 ~p~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~---~~~~~~~~s~s~~~~~~~~~~~~ 189 (203)
T PRK13462 113 CPGGESVAQVNERADRAVALALEHMESRDVVFVSHGHFSRAVITRWVELPLAEG---SRFAMPTASIAICGFEHGVRQLS 189 (203)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEeeCCceEEE
Confidence 357899999999999999998653 56789999999999999988754432222 25688999999999987755556
Q ss_pred CCCCCcCCCCCC
Q 043114 252 DAPTTNYPGKIP 263 (264)
Q Consensus 252 ~~~~~~~~~~~~ 263 (264)
..+.+.||..|.
T Consensus 190 ~~~~~~~~~~~~ 201 (203)
T PRK13462 190 ALGLTGHPQPIA 201 (203)
T ss_pred eeccCCCCcccc
Confidence 667777887763
No 6
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=2.5e-35 Score=247.69 Aligned_cols=188 Identities=21% Similarity=0.217 Sum_probs=150.7
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
+++|||||||||.+|..+.++ +..|+|||+.|++||+.+++.|+.. ++++|||||+.||+|||+++...
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~-------G~~d~~Lt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~ 70 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQ-------GRKNSALTENGILQAKQLGERMKDL----SIHAIYSSPSERTLHTAELIKGE 70 (203)
T ss_pred ceEEEEEeCCCCccchhCccc-------CCCCCCcCHHHHHHHHHHHHHhcCC----CCCEEEECCcHHHHHHHHHHHhc
Confidence 467999999999999988775 7889999999999999999999852 79999999999999999988664
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCC
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTAD 174 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~ 174 (264)
.. .++.+++.|+|+ .++.++|.+..++.+.||.. +..+..+ ...+.++
T Consensus 71 ~~----------------------------~~~~~~~~l~E~--~~G~~eG~~~~e~~~~~p~~-~~~~~~~-~~~~~~~ 118 (203)
T PRK13463 71 RD----------------------------IPIIADEHFYEI--NMGIWEGQTIDDIERQYPDD-IQLFWNE-PHLFQST 118 (203)
T ss_pred CC----------------------------CCceECcCceeC--CCCccCCCcHHHHhhhCHHH-HHHHHhC-hhccCCC
Confidence 21 356778899998 46788999999999999852 3333322 2334567
Q ss_pred cccCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeecc
Q 043114 175 VREANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRS 247 (264)
Q Consensus 175 ~~Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~ 247 (264)
++||++++.+|+..+++.+.+. .+++|||||||++|++++..+.+.....++. ...+.||+++.++++++.
T Consensus 119 ~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~ 190 (203)
T PRK13463 119 SGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLLVGHFAGIEIENVWD--DPFMHSASLSIIEFEDGK 190 (203)
T ss_pred CCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhh--ccCccCceEEEEEEeCCc
Confidence 8999999999999999998654 5678999999999999998886543322211 224689999999997654
No 7
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.3e-35 Score=248.39 Aligned_cols=192 Identities=15% Similarity=0.068 Sum_probs=149.1
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
++|||||||||.+|..++++ |+.|.|||+.|++||+.+++.|++.+. ++++|||||+.||+|||+++.+..
T Consensus 1 m~l~LvRHG~t~~n~~~~~~-------G~~d~~Lt~~G~~qa~~~~~~l~~~~~--~~d~i~sSpl~Ra~~TA~~i~~~~ 71 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFT-------GWRDVNLTERGVEEAKAAGKKLKEAGY--EFDIAFTSVLTRAIKTCNIVLEES 71 (227)
T ss_pred CEEEEEecCCCccccccCcC-------CCCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEEeChHHHHHHHHHHHHhc
Confidence 36999999999999998876 888999999999999999999986332 799999999999999999987642
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCC-------
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDD------- 168 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~------- 168 (264)
.. ...++++++.|+|+ .++.|+|.+.+++.+.+|...+..+....+
T Consensus 72 ~~-------------------------~~~~~~~~~~LrE~--~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~ 124 (227)
T PRK14118 72 NQ-------------------------LWIPQVKNWRLNER--HYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLD 124 (227)
T ss_pred CC-------------------------CCCCeecCCccccc--cCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccc
Confidence 10 01345677899998 578899999999988887521211111000
Q ss_pred ----------------CCCCCCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCccccc
Q 043114 169 ----------------ILWTADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEI 229 (264)
Q Consensus 169 ----------------~~w~~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~ 229 (264)
....+++|||+.++.+|+..+++.+.. .++++|||||||++|++++..+.+.....+ .
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~---~ 201 (227)
T PRK14118 125 PQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADI---M 201 (227)
T ss_pred cccccccccchhhccCcCCCCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---h
Confidence 012357899999999999999998764 356789999999999999988754332222 2
Q ss_pred ccCccCceEEEEEEeec
Q 043114 230 CTHFANCELRSMVIVDR 246 (264)
Q Consensus 230 ~~~~~n~~v~~~~~~d~ 246 (264)
.+.++||+++.+.++++
T Consensus 202 ~~~i~~~s~~~~~~~~~ 218 (227)
T PRK14118 202 DLEIPTGQPLVYKLDDN 218 (227)
T ss_pred cccCCCCceEEEEECCC
Confidence 56789999999999776
No 8
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.7e-34 Score=244.66 Aligned_cols=186 Identities=20% Similarity=0.077 Sum_probs=146.1
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++||||||||+.+|..+..+ +..|.+||+.|++||+.+++.|++. +++.|||||+.||+|||+++.+.
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~-------g~~d~~Lt~~G~~qA~~~~~~l~~~----~~~~I~sSpl~Ra~qTA~~i~~~ 69 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQ-------GQSDSPLTAKGEQQAMQVAERAKEL----GITHIISSDLGRTRRTAEIIAQA 69 (215)
T ss_pred CcEEEEEeCCCcccccccccC-------CCCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEECCcHHHHHHHHHHHHh
Confidence 688999999999999987765 7789999999999999999999853 78999999999999999998765
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCC
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTAD 174 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~ 174 (264)
++ .++.++++|+|+ .++.++|...+++...++.+ ..........+.++
T Consensus 70 ~~----------------------------~~~~~~~~L~E~--~~G~~eg~~~~~~~~~~~~~--~~~~~~~~~~~~~p 117 (215)
T PRK03482 70 CG----------------------------CDIIFDPRLREL--NMGVLEKRHIDSLTEEEEGW--RRQLVNGTVDGRIP 117 (215)
T ss_pred cC----------------------------CCeeEChhcccc--CCccccCCcHHHHHhhHHHH--HHhhhcCCCccCCC
Confidence 32 356778899998 46778888888776544322 11110112234457
Q ss_pred cccCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 175 VREANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 175 ~~Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
++||+.++..|+..+++.+... .+++|||||||++|++++..+.+.....+ ..+.+.||+++.+++.+.
T Consensus 118 ~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~---~~~~~~n~sis~~~~~~~ 187 (215)
T PRK03482 118 EGESMQELSDRMHAALESCLELPQGSRPLLVSHGIALGCLVSTILGLPAWAE---RRLRLRNCSISRVDYQES 187 (215)
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHhCCChhhh---hccCCCCcEEEEEEEeCC
Confidence 8999999999999999998653 45689999999999999988865433222 246799999999999764
No 9
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.5e-34 Score=245.33 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=153.9
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++|||||||||.+|..+.++ ++.|.+||+.|++||++++++|++. ++++|||||++||+|||+.+++.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~-------G~~D~~Lte~G~~Qa~~l~~~L~~~----~~d~iysSpl~Ra~qTA~~i~~~ 69 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFT-------GWVDIPLSQQGIAEAIAAGEKIKDL----PIDCIFTSTLVRSLMTALLAMTN 69 (228)
T ss_pred CcEEEEEeCCCCccccccccC-------CCCCCCcCHHHHHHHHHHHHHhhcC----CCCEEEEcCcHHHHHHHHHHHHh
Confidence 688999999999999988775 8889999999999999999999862 89999999999999999988753
Q ss_pred CCCCCCCCCCcc-ccc------ccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCC
Q 043114 95 EGYADGIDAPPL-MVA------DAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESND 167 (264)
Q Consensus 95 ~~~~~~~~~~~l-~~~------~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~ 167 (264)
..... .|.. .+. .+...... ... ..++...+.|+|+ .++.++|++.+++.+.||...+..+...
T Consensus 70 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~L~E~--~~G~~eG~~~~ei~~~~~~~~~~~w~~~- 140 (228)
T PRK01112 70 HSSGK---IPYIVHEEDDKKWMSRIYSDEE--PEQ-MIPLFQSSALNER--MYGELQGKNKAETAEKFGEEQVKLWRRS- 140 (228)
T ss_pred hcccc---cccccccccccccccccccccc--ccc-CCCeeecCccccc--cccccCCCCHHHHHHHCcHHHHHHHhCc-
Confidence 21100 0000 000 00000000 001 1456778899998 5778999999999999985322223221
Q ss_pred CCCCCCCcccCHHHHHHHHHHHHHHHH-c--CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEe
Q 043114 168 DILWTADVREANEEVAKRGMKFVNWLW-T--RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIV 244 (264)
Q Consensus 168 ~~~w~~~~~Es~~~~~~R~~~~l~~l~-~--~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~ 244 (264)
....+++|||+.++.+|+..+++.+. + ..+++|+|||||++|++++..+.+.....+ ..+.++||+++.++++
T Consensus 141 -~~~~~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~---~~~~~~~~~~~~~~~~ 216 (228)
T PRK01112 141 -YKTAPPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEV---LSLELPTGKPIVYEWT 216 (228)
T ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhcccCCcceEEEEEC
Confidence 22446789999999999999999753 3 256889999999999999988865433322 2568899999999997
Q ss_pred ecc
Q 043114 245 DRS 247 (264)
Q Consensus 245 d~~ 247 (264)
..+
T Consensus 217 ~~~ 219 (228)
T PRK01112 217 GQK 219 (228)
T ss_pred CCC
Confidence 665
No 10
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.1e-34 Score=240.67 Aligned_cols=193 Identities=16% Similarity=0.125 Sum_probs=152.5
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
.++|||||||||.+|..+..+ ++.|.|||+.|++||++++++|++.++ ++++|||||+.||+|||+++...
T Consensus 2 ~~~i~LVRHGet~~n~~~~~~-------G~~d~~Lt~~G~~qA~~~~~~L~~~~~--~~d~i~sSpl~Ra~qTA~~i~~~ 72 (206)
T PRK01295 2 SRTLVLVRHGQSEWNLKNLFT-------GWRDPDLTEQGVAEAKAAGRKLKAAGL--KFDIAFTSALSRAQHTCQLILEE 72 (206)
T ss_pred CceEEEEeCCCCcccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEeCCcHHHHHHHHHHHHH
Confidence 468999999999999988765 788999999999999999999986443 79999999999999999999875
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCC
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTAD 174 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~ 174 (264)
++.. ..++.+++.|+|+ .++.+.|.+.+++.+.||......+.. +..+.++
T Consensus 73 ~~~~-------------------------~~~~~~~~~L~E~--~~G~~eg~~~~e~~~~~~~~~~~~~~~--~~~~~~p 123 (206)
T PRK01295 73 LGQP-------------------------GLETIRDQALNER--DYGDLSGLNKDDARAKWGEEQVHIWRR--SYDVPPP 123 (206)
T ss_pred cCCC-------------------------CCCeEECCccccc--ccccccCCcHHHHHHHchHHHHHHhhc--ccCCCCc
Confidence 4321 1356778899998 467789999999999988522222322 2234567
Q ss_pred cccCHHHHHHHHHHHH-HHHHc--CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeeccc
Q 043114 175 VREANEEVAKRGMKFV-NWLWT--RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRSM 248 (264)
Q Consensus 175 ~~Es~~~~~~R~~~~l-~~l~~--~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~~ 248 (264)
+|||+.++.+|+..++ +.+.. ..+++|||||||++|++++..+.+.....+ ..+.+.|+..+.+.+++...
T Consensus 124 ~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 197 (206)
T PRK01295 124 GGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGNSLRALVMVLDGLTPEQI---LKLELATGVPIVYRLNADST 197 (206)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hhcCCCCCCcEEEEecCCCC
Confidence 8999999999999974 55644 256889999999999999998865433322 25678899999999877653
No 11
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=2.2e-34 Score=241.11 Aligned_cols=185 Identities=19% Similarity=0.163 Sum_probs=147.3
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
++|||||||||.+|..+..+ +..|+|||+.|++||+.+++.|+.. ++++|||||++||+|||+++++..
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~-------G~~d~pLt~~G~~Qa~~~~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYS-------GHAPTPLTARGIEQAQNLHTLLRDV----PFDLVLCSELERAQHTARLVLSDR 69 (199)
T ss_pred CeEEEEeCCCCccccCCcEe-------CCCCCCcCHHHHHHHHHHHHHHhCC----CCCEEEECchHHHHHHHHHHHhcC
Confidence 46999999999999988765 7889999999999999999999853 789999999999999999987753
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCc
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADV 175 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~ 175 (264)
+ .++.+++.|+|+ .++.++|++..++...+|. .|..+..... ...+++
T Consensus 70 ~----------------------------~~~~~~~~L~E~--~~G~~eg~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 117 (199)
T PRK15004 70 Q----------------------------LPVHIIPELNEM--FFGDWEMRHHRDLMQEDAE-NYAAWCNDWQ-HAIPTN 117 (199)
T ss_pred C----------------------------CCceeChhheeC--CCcccCCCCHHHHHHHCHH-HHHHHHhChh-hcCCCC
Confidence 2 345678899998 4677889999988887764 2333322211 112457
Q ss_pred ccCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 176 REANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
+||+.++..|+..+++.+.+. .+++|||||||++|++++..+.+.....+ ..+.+.||+++.++++++
T Consensus 118 gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~ 186 (199)
T PRK15004 118 GEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLIARLLGMPAEAM---WHFRVEQGCWSAIDINQG 186 (199)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hccccCCceEEEEEecCC
Confidence 899999999999999998753 46789999999999999988865432222 245789999999999654
No 12
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.1e-34 Score=246.15 Aligned_cols=194 Identities=16% Similarity=0.110 Sum_probs=150.4
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
.|++|||||||||.+|..+..+ ++.|.+||+.|++||+++++.|++.++ .|+.|||||+.||+|||+++++
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~-------G~~D~pLTe~G~~QA~~~a~~l~~~~~--~~~~IysSpl~Ra~qTA~~i~~ 73 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFT-------GWVDVDLTEKGEAEAKRGGELLAEAGV--LPDVVYTSLLRRAIRTANLALD 73 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEecChHHHHHHHHHHHH
Confidence 4678999999999999988876 788999999999999999999986433 6899999999999999999875
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCC-------
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESN------- 166 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~------- 166 (264)
.... ...++++++.|+|+ .++.++|++..++.+.||...+..+...
T Consensus 74 ~~~~-------------------------~~~~i~~~~~L~E~--~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~ 126 (249)
T PRK14120 74 AADR-------------------------LWIPVRRSWRLNER--HYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPP 126 (249)
T ss_pred hccc-------------------------CCCCeEECCCcccc--cccccCCCCHHHHHHHccHHHHHHHHhccccCCCc
Confidence 3210 01356778899998 5677899999999998875212222211
Q ss_pred ----------CCCCC----CCCcccCHHHHHHHHHHHHHHH-Hc--CCCCeEEEEeCHHHHHHHHHhhcCCCCCCccccc
Q 043114 167 ----------DDILW----TADVREANEEVAKRGMKFVNWL-WT--RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEI 229 (264)
Q Consensus 167 ----------~~~~w----~~~~~Es~~~~~~R~~~~l~~l-~~--~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~ 229 (264)
.+..+ .++++||+.++.+|+..+++++ .. ..+++|||||||++|++++..+.+.....+ .
T Consensus 127 ~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~---~ 203 (249)
T PRK14120 127 IEDGSEYSQDNDPRYADLGVGPRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDI---A 203 (249)
T ss_pred cccccccccccCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHh---h
Confidence 01111 1368999999999999999985 32 356789999999999999998765433222 3
Q ss_pred ccCccCceEEEEEEeec
Q 043114 230 CTHFANCELRSMVIVDR 246 (264)
Q Consensus 230 ~~~~~n~~v~~~~~~d~ 246 (264)
.+.++||+++.+++++.
T Consensus 204 ~~~i~~~~~~~~~~~~~ 220 (249)
T PRK14120 204 GLNIPTGIPLVYELDED 220 (249)
T ss_pred eeccCCCceEEEEECCC
Confidence 56889999999999775
No 13
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.5e-34 Score=244.68 Aligned_cols=193 Identities=15% Similarity=0.114 Sum_probs=150.2
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
|+|||||||||.+|..++.+ +..|.|||+.|++||+.+++.|+..++ ++++|||||++||+|||+++.+..
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~-------G~~D~pLte~G~~QA~~la~~L~~~~~--~~d~IysSpl~Ra~qTA~~i~~~~ 71 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFT-------GWTDVDLSEKGVSEAKAAGKLLKEEGY--TFDVAYTSVLKRAIRTLWIVLDEL 71 (247)
T ss_pred CEEEEEECCCcccccccCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEEcCCHHHHHHHHHHHHHc
Confidence 46999999999999988776 788999999999999999999986443 789999999999999999987653
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCC--------
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESND-------- 167 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~-------- 167 (264)
+.. ..++.+.+.|+|+ .++.++|.+.+++.+.+|...+..+....
T Consensus 72 ~~~-------------------------~~~~~~~~~L~E~--~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T PRK14115 72 DQM-------------------------WLPVEKSWRLNER--HYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALE 124 (247)
T ss_pred CCC-------------------------CCCceECcccccc--ccccccCCCHHHHHHHhhHHHHHHHhcccccCCCccc
Confidence 210 0245678899998 56789999999998887742122221100
Q ss_pred ---------CCCC------CCCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCccccc
Q 043114 168 ---------DILW------TADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEI 229 (264)
Q Consensus 168 ---------~~~w------~~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~ 229 (264)
+..+ ..++|||+.++..|+..+++.+.. ..+++|||||||++|++++..+.+.....+ .
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~---~ 201 (247)
T PRK14115 125 KDDERYPGHDPRYAKLPEEELPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEI---L 201 (247)
T ss_pred ccccccccccchhhcccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHh---h
Confidence 1111 246899999999999999998643 356789999999999999998865433322 2
Q ss_pred ccCccCceEEEEEEeecc
Q 043114 230 CTHFANCELRSMVIVDRS 247 (264)
Q Consensus 230 ~~~~~n~~v~~~~~~d~~ 247 (264)
...++||+++.++++++.
T Consensus 202 ~~~~~~~~~~~l~~~~~~ 219 (247)
T PRK14115 202 ELNIPTGVPLVYELDENL 219 (247)
T ss_pred eeecCCCceEEEEECCCC
Confidence 568999999999998774
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=5.7e-34 Score=245.48 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=148.6
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
++|||||||||.+|..++.+ ++.|.+||+.|++||+.++++|+..++ ++++|||||++||+|||+++...+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~-------G~~D~~Lt~~G~~QA~~la~~L~~~~~--~~d~iysSpl~Ra~qTA~ii~~~~ 71 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFT-------GWVDVKLSEKGQQEAKRAGELLKEEGY--EFDVAYTSLLKRAIHTLNIALDEL 71 (245)
T ss_pred CEEEEEeCCCcCccccCCcC-------CCCCCCcCHHHHHHHHHHHHHHHhcCC--CCCEEEEcChHHHHHHHHHHHHhc
Confidence 46999999999999988876 788999999999999999999986433 789999999999999999987653
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCC---------
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESN--------- 166 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~--------- 166 (264)
... ..++.+.+.|+|+ .++.++|.+.+++.+.||...+..+...
T Consensus 72 ~~~-------------------------~~~i~~~~~L~E~--~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~ 124 (245)
T TIGR01258 72 DQL-------------------------WIPVKKSWRLNER--HYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPID 124 (245)
T ss_pred CCC-------------------------CCCeeeCcccccc--cCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCC
Confidence 210 0245667889998 4678999999999988874211111100
Q ss_pred --------CCCCC------CCCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCccccc
Q 043114 167 --------DDILW------TADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEI 229 (264)
Q Consensus 167 --------~~~~w------~~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~ 229 (264)
.+..| ..+++||+.++.+|+..+++.+.. ..+++|||||||++|++++..+.+...... .
T Consensus 125 ~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~---~ 201 (245)
T TIGR01258 125 ESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEI---L 201 (245)
T ss_pred cccccccccChhhhcCCcccCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHH---h
Confidence 01112 146799999999999999999753 256789999999999999998865432222 2
Q ss_pred ccCccCceEEEEEEeec
Q 043114 230 CTHFANCELRSMVIVDR 246 (264)
Q Consensus 230 ~~~~~n~~v~~~~~~d~ 246 (264)
...++||+++.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~ 218 (245)
T TIGR01258 202 ELNIPTGIPLVYELDEN 218 (245)
T ss_pred heecCCCceEEEEECCC
Confidence 56789999999999665
No 15
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=4.8e-34 Score=234.48 Aligned_cols=176 Identities=19% Similarity=0.143 Sum_probs=141.3
Q ss_pred EEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCCC
Q 043114 18 IHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEGY 97 (264)
Q Consensus 18 i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~~ 97 (264)
|||||||||.+|..+.. +..|++||+.|++||+.++++|+. .++++|||||+.||+|||+.+++.++
T Consensus 1 i~lvRHg~t~~n~~~~~--------g~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~- 67 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY--------GQTDVPLAEKGAEQAAALREKLAD----VPFDAVYSSPLSRCRELAEILAERRG- 67 (177)
T ss_pred CEEEeCCCCccCCCcee--------CCCCCCcChhHHHHHHHHHHHhcC----CCCCEEEECchHHHHHHHHHHHhhcC-
Confidence 68999999999987653 567999999999999999999974 38999999999999999999877532
Q ss_pred CCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCccc
Q 043114 98 ADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVRE 177 (264)
Q Consensus 98 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~E 177 (264)
.++.+.+.|+|+ .++.+.|.+.+++.+.||. +..+.... ..+.++++|
T Consensus 68 ---------------------------~~~~~~~~L~E~--~~G~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~~gE 115 (177)
T TIGR03162 68 ---------------------------LPIIKDPRLREM--DFGDWEGRSWDEIPEAYPE--LDAWAADW-QHARPPGGE 115 (177)
T ss_pred ---------------------------CCceECCccccc--cCCccCCCCHHHHHHhCHH--HHHHHhCc-ccCCCcCCC
Confidence 245678899998 4677889999999988873 33333221 224567899
Q ss_pred CHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEE
Q 043114 178 ANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSM 241 (264)
Q Consensus 178 s~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~ 241 (264)
|+.++.+|+..+++.+.+. .+++|||||||++|+++++.+.+.....+ ....+.||+++.+
T Consensus 116 s~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~---~~~~~~n~~i~~l 177 (177)
T TIGR03162 116 SFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAHLLGLPLEQW---WSFDVEYGSITLI 177 (177)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhCCCHHHH---hccccCCeeEEeC
Confidence 9999999999999998765 57889999999999999988865332222 2468999999864
No 16
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=1.3e-33 Score=237.38 Aligned_cols=183 Identities=18% Similarity=0.144 Sum_probs=143.1
Q ss_pred EEEEEeCCccccCcccccCccccCCCCCC-CCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 17 TIHLVRHAQGIHNVEGEKNHDAYLSYDLF-DAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 17 ~i~lvRHGes~~n~~~~~~~~~~~~~~~~-D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
+||||||||+.+|..+..+ +.. |.|||+.|++||++++++|+.. +++.|||||+.||+|||+++.+.+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~-------g~~~d~~Lt~~G~~qa~~l~~~l~~~----~~~~i~sSpl~Ra~qTA~~i~~~~ 69 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLA-------GRTPGVDLDERGREQAAALAERLADL----PIAAIVSSPLERCRETAEPIAEAR 69 (204)
T ss_pred CEEEEeCCCCCcccccccc-------CCCCCCCcCHHHHHHHHHHHHHHhcC----CCCEEEeCcHHHHHHHHHHHHHhc
Confidence 4899999999999988776 666 5999999999999999999852 799999999999999999987753
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCc
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADV 175 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~ 175 (264)
+ .++.+++.|+|+ .++.++|++.+++.+. + .+..+... .....+++
T Consensus 70 ~----------------------------~~~~~~~~L~E~--~~G~~eG~~~~e~~~~-~--~~~~~~~~-~~~~~~p~ 115 (204)
T TIGR03848 70 G----------------------------LPPRVDERLGEC--DYGDWTGRELKELAKE-P--LWPVVQAH-PSAAVFPG 115 (204)
T ss_pred C----------------------------CCceECcccccC--CCCeeCCcCHHHHhCc-H--HHHHHhcC-cccCCCCC
Confidence 2 356778899998 4677889988887643 1 12222211 11233567
Q ss_pred ccCHHHHHHHHHHHHHHHHcC------CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeecc
Q 043114 176 REANEEVAKRGMKFVNWLWTR------KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRS 247 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~------~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~ 247 (264)
+||+.++..|+..+++.+.+. .+++|||||||++|++++..+.+.....+ ..+.++||+++.+++.++.
T Consensus 116 gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~---~~~~~~n~sit~l~~~~~~ 190 (204)
T TIGR03848 116 GESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLF---QRIVVDPCSVSVVRYTPLR 190 (204)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHh---heeeeCCCeEEEEEEeCCc
Confidence 999999999999999998643 45789999999999999988755432222 2468999999999997754
No 17
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=7.5e-33 Score=233.21 Aligned_cols=191 Identities=21% Similarity=0.173 Sum_probs=154.3
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
.|++|||||||||.+|..+..+ ++.|+|||+.|++||+.++++|+... .+++.||+||+.||+|||+++++
T Consensus 1 ~~~~i~lvRHGqt~~n~~~~~~-------G~~d~pLt~~G~~QA~~l~~~l~~~~--~~~~~i~sS~l~Ra~~TA~~~a~ 71 (208)
T COG0406 1 MMMRLYLVRHGETEWNVEGRLQ-------GWTDSPLTEEGRAQAEALAERLAARD--IGFDAIYSSPLKRAQQTAEPLAE 71 (208)
T ss_pred CceEEEEEecCCcccccccccc-------CCCCCCCCHHHHHHHHHHHHHHhhcC--CCCCEEEECchHHHHHHHHHHHH
Confidence 3789999999999999988876 78899999999999999999999543 38999999999999999999998
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTA 173 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~ 173 (264)
.++. ++..++.|+|+ .++.++|....++.+.||.. +..+..+. .....
T Consensus 72 ~~~~----------------------------~~~~~~~l~E~--~~G~~eg~~~~e~~~~~p~~-~~~~~~~~-~~~~~ 119 (208)
T COG0406 72 ELGL----------------------------PLEVDDRLREI--DFGDWEGLTIDELAEEPPEE-LAAWLADP-YLAPP 119 (208)
T ss_pred hcCC----------------------------CceecCCeeEe--ecccccCCcHHHHHHhCHHH-HHHHhcCc-cccCC
Confidence 7532 35678899998 56788999999999999863 23332211 12223
Q ss_pred CcccCHHHHHHHHHHHHHHHHcCCC-CeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeeccc
Q 043114 174 DVREANEEVAKRGMKFVNWLWTRKE-KEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRSM 248 (264)
Q Consensus 174 ~~~Es~~~~~~R~~~~l~~l~~~~~-~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~~ 248 (264)
+++||+.++..|+..++..+..... ++|+|||||++|++++..+.+-... ......++||+++.+++++...
T Consensus 120 ~~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~l~~~~~~~~~~---~~~~~~~~~~si~~l~~~~~~~ 192 (208)
T COG0406 120 PGGESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRALLAYLLGLDLE---ELWRLRLDNASVTVLEFDDGRF 192 (208)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHHHHHHhcCCChh---hHHhcCCCCceEEEEEeeCCCc
Confidence 4489999999999999999976543 3799999999999999888653222 1236799999999999999864
No 18
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.97 E-value=2.9e-31 Score=242.17 Aligned_cols=187 Identities=17% Similarity=0.104 Sum_probs=152.4
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
.+++|||||||++.+|..++++ +..|++||+.|++||+.+++.|+.. .++++|||||+.||+|||+.+++
T Consensus 170 ~~~~i~LvRHGet~~n~~~~~~-------g~~D~~Lt~~G~~QA~~l~~~l~~~---~~~d~i~sSpl~Ra~qTA~~i~~ 239 (372)
T PRK07238 170 TPTRLLLLRHGQTELSVQRRYS-------GRGNPELTEVGRRQAAAAARYLAAR---GGIDAVVSSPLQRARDTAAAAAK 239 (372)
T ss_pred CceEEEEEeCCCCCcccCCeee-------CCCCCCcCHHHHHHHHHHHHHHhcc---CCCCEEEECChHHHHHHHHHHHH
Confidence 7788999999999999887765 7789999999999999999999853 16999999999999999999877
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTA 173 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~ 173 (264)
.++ .++.+.+.|+|+ .++.++|++.+++.+.||.. +..+..+ ..+.+
T Consensus 240 ~~~----------------------------~~~~~~~~L~E~--~~G~~eg~~~~ei~~~~p~~-~~~w~~~--~~~~~ 286 (372)
T PRK07238 240 ALG----------------------------LDVTVDDDLIET--DFGAWEGLTFAEAAERDPEL-HRAWLAD--TSVAP 286 (372)
T ss_pred hcC----------------------------CCcEECccceeC--CCCccCCCCHHHHHHHCHHH-HHHHHhC--CCCCC
Confidence 542 356678899998 46778999999999988863 3334332 23567
Q ss_pred CcccCHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 174 DVREANEEVAKRGMKFVNWLWT-RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 174 ~~~Es~~~~~~R~~~~l~~l~~-~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
+++||+.++.+|+..+++.|.. ..+++|+|||||++|++++..+.+.....+ ....++||+++.+.+.++
T Consensus 287 p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~---~~~~~~~~~~s~l~~~~~ 357 (372)
T PRK07238 287 PGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIKTLLRLALDAGPGVL---YRLHLDLASLSIAEFYPD 357 (372)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEEECC
Confidence 7899999999999999999865 456789999999999999998765332222 245789999999999654
No 19
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.96 E-value=1.6e-30 Score=208.43 Aligned_cols=156 Identities=28% Similarity=0.340 Sum_probs=123.6
Q ss_pred EEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCC
Q 043114 17 TIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 17 ~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
+|||||||++.+|..+..+ +..|++||+.|+.||+.++++|.+.+ .+++.|||||+.||+|||+++.+.+.
T Consensus 1 ~i~liRHg~~~~n~~~~~~-------~~~d~~Lt~~G~~qA~~~~~~l~~~~--~~~~~i~~Sp~~R~~qTA~~~~~~~~ 71 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQ-------GDSDPPLTERGREQARQLGEYLAERD--IQIDVIYSSPLRRCIQTAEIIAEGLG 71 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCG-------TTSSTGBEHHHHHHHHHHHHHHHHTT--SSCSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CEEEEECCccccccCCCcC-------CCCCccccHHHHHHHHhhcccccccc--cCceEEecCCcchhhhhhchhhcccc
Confidence 5999999999999877765 67778999999999999999998543 38999999999999999999877432
Q ss_pred CCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCcc
Q 043114 97 YADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVR 176 (264)
Q Consensus 97 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~ 176 (264)
.++.+.+.|+|+. .+.+.|.+..++.+.|+.. +..+.. ....+.++++
T Consensus 72 ----------------------------~~~~~~~~l~E~~--~g~~~g~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ 119 (158)
T PF00300_consen 72 ----------------------------IEIIVDPRLREID--FGDWEGRPFDEIEEKFPDE-FEAWWS-DPYFYRPPGG 119 (158)
T ss_dssp ----------------------------SEEEEEGGGSCCG--CGGGTTSBHHHHHHHHHHH-HHHHHH-HTSSCGSTTS
T ss_pred ----------------------------ccccccccccccc--chhhcccchhhHHhhhhcc-cchhhc-cccccccccC
Confidence 3567889999984 2444599999999988731 222221 1233456688
Q ss_pred cCHHHHHHHHHHHHHHHH--cCCCCeEEEEeCHHHHHHH
Q 043114 177 EANEEVAKRGMKFVNWLW--TRKEKEIAVVTHSGFLYHT 213 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~--~~~~~~vlvVsHg~~i~~l 213 (264)
||+.++..|+..+++.+. ...+++|||||||++|+++
T Consensus 120 Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 120 ESWEDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 999999999999999998 5788999999999999975
No 20
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.96 E-value=6.1e-29 Score=199.94 Aligned_cols=152 Identities=21% Similarity=0.188 Sum_probs=119.5
Q ss_pred EEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCC
Q 043114 17 TIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 17 ~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
+|||||||+|.+|..+... +..|.|||+.|+.||+.++++|.... ..+++.|||||+.||+|||+++.+.++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~-------g~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~ 72 (155)
T smart00855 1 RLYLIRHGETEANREGRLT-------GWTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIALG 72 (155)
T ss_pred CEEEEeCCCCcccccCeEc-------CCCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhcC
Confidence 4899999999999876553 45899999999999999999998531 137999999999999999999887542
Q ss_pred CCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCcc
Q 043114 97 YADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVR 176 (264)
Q Consensus 97 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~ 176 (264)
. + ...+.|+|+ ..+.+.|.+..++...+|.. +..+ ..+.++++
T Consensus 73 ~----------------------------~-~~~~~L~E~--~~G~~~g~~~~~~~~~~~~~-~~~~-----~~~~~~~g 115 (155)
T smart00855 73 L----------------------------G-EVDPRLRER--DYGAWEGLTKEEERAKAWTR-PADW-----LGAAPPGG 115 (155)
T ss_pred C----------------------------C-CCChhhhhc--ccceecCCcHHHHHHHHHHH-Hhcc-----CCCCCcCC
Confidence 1 1 256788887 35667888888887776542 1111 22346789
Q ss_pred cCHHHHHHHHHHHHHHHHcC---CCCeEEEEeCHHHHHHH
Q 043114 177 EANEEVAKRGMKFVNWLWTR---KEKEIAVVTHSGFLYHT 213 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~---~~~~vlvVsHg~~i~~l 213 (264)
||+.++..|+..+++.+... .+++|||||||++|+++
T Consensus 116 Es~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir~~ 155 (155)
T smart00855 116 ESLADVVERLVRALEELIATHDKSGQNVLIVSHGGVIRAL 155 (155)
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccccC
Confidence 99999999999999998754 56789999999999863
No 21
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=7.2e-28 Score=200.28 Aligned_cols=195 Identities=16% Similarity=0.076 Sum_probs=150.7
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
.+.++++||||||.||..++++ |+.|.+||++|..||+.++++|++.++ .++.+|||+++||+|||+.+++
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~-------G~~D~~Lte~G~~qA~~~~~~l~~~~~--~~~~~~tS~l~RakqT~~~il~ 74 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQ-------GWIDAPLTEKGEEQAKAAAQRLKDLNI--EFDVCYTSDLKRAKQTAELILE 74 (214)
T ss_pred cceEEEEEecCchhhhhhCccc-------ccccCccChhhHHHHHHHHHHHHhcCC--cccEEecCHHHHHHHHHHHHHH
Confidence 4578999999999999999987 999999999999999999999998765 7899999999999999999998
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCc-cccCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINF-SLIESNDDILWT 172 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~-~~~~~~~~~~w~ 172 (264)
.... ...|+.....|+|+ .++...|....++.+.++.-.+ .+........-.
T Consensus 75 ~~~~-------------------------~~~pv~~~~~L~ER--~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~ 127 (214)
T KOG0235|consen 75 ELKQ-------------------------KKVPVLYTWRLNER--HYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIP 127 (214)
T ss_pred hhcc-------------------------CCcceEechhhchh--hhccccCccHHHHHHHcchhccccchhhccCCcCC
Confidence 7431 12577888899998 5777899999999999885321 111111111223
Q ss_pred CCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeecc
Q 043114 173 ADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRS 247 (264)
Q Consensus 173 ~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~ 247 (264)
++.+||..++.+|+..+++.... ..+++|+||+||+.+|+++..+.+-....+ ....+.++=...++++...
T Consensus 128 ~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i---~~~~~~t~vp~v~~ld~~~ 202 (214)
T KOG0235|consen 128 LPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAI---KELNLPTGVPIVYELDKNK 202 (214)
T ss_pred CCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhh---hheecccCCceEEEccccc
Confidence 56789999999999999998643 456889999999999999999865444322 1334455555555555544
No 22
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.95 E-value=9.1e-28 Score=206.11 Aligned_cols=180 Identities=17% Similarity=0.101 Sum_probs=136.9
Q ss_pred cCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCCCCCCCCCCccc
Q 043114 28 HNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEGYADGIDAPPLM 107 (264)
Q Consensus 28 ~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~~~~~~~~~~l~ 107 (264)
+|..++.+ |+.|+|||+.|++||+.+++.|+..++ +|++|||||++||+|||+.+.+.+...
T Consensus 1 ~N~~~~~q-------G~~D~pLTe~G~~QA~~l~~~L~~~~~--~~d~iysSpl~Ra~qTA~~i~~~~~~~--------- 62 (236)
T PTZ00123 1 WNKENRFT-------GWTDVPLSEKGVQEAREAGKLLKEKGF--RFDVVYTSVLKRAIKTAWIVLEELGQL--------- 62 (236)
T ss_pred CcccCcee-------CCCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECChHHHHHHHHHHHHhcCCC---------
Confidence 46666665 889999999999999999999986544 799999999999999999988754210
Q ss_pred ccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCC----------CCC--------
Q 043114 108 VADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESN----------DDI-------- 169 (264)
Q Consensus 108 ~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~----------~~~-------- 169 (264)
..++...+.|+|+ .++.++|.+..++.+.+|...+..+... .+.
T Consensus 63 ----------------~~~~~~~~~L~E~--~~G~~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (236)
T PTZ00123 63 ----------------HVPVIKSWRLNER--HYGALQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPV 124 (236)
T ss_pred ----------------CCCceeCchhhhc--ccccccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchh
Confidence 1245677899998 5678999999999988875211111100 000
Q ss_pred -----CCCCCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEE
Q 043114 170 -----LWTADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSM 241 (264)
Q Consensus 170 -----~w~~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~ 241 (264)
...++++||+.++.+|+..+++.++. ..+++|||||||++|++++..+.+.....+ ....+.||+++.+
T Consensus 125 ~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~---~~~~~~n~~~~~~ 201 (236)
T PTZ00123 125 YKDIPKDALPNTECLKDTVERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDI---LELNIPTGVPLVY 201 (236)
T ss_pred hhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhccCCCCceEEE
Confidence 01236799999999999999998642 346789999999999999998865433222 2568999999999
Q ss_pred EEeec
Q 043114 242 VIVDR 246 (264)
Q Consensus 242 ~~~d~ 246 (264)
+|+++
T Consensus 202 ~~~~~ 206 (236)
T PTZ00123 202 ELDEN 206 (236)
T ss_pred EECCC
Confidence 99877
No 23
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.95 E-value=1.9e-27 Score=231.08 Aligned_cols=203 Identities=13% Similarity=0.062 Sum_probs=147.5
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
.++|||||||||.+|..++++ | |+|||+.|++||++++++|++.. ...++.|||||++||+|||+++...
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~-------G--d~pLt~~G~~qA~~l~~~l~~~~-~~~~~~V~sSpl~Ra~~TA~~i~~~ 488 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIG-------G--NSRLTERGRAYSRALFEYFQKEI-STTSFTVMSSCAKRCTETVHYFAEE 488 (664)
T ss_pred CceEEEEecccchhhhcCccC-------C--CCccCHHHHHHHHHHHHHHHhcc-CCCCcEEEcCCcHHHHHHHHHHHhc
Confidence 357999999999999999875 4 89999999999999999998631 1246799999999999999987543
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCC
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTAD 174 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~ 174 (264)
...... ...... .+......++...+.|+|+ .++.|+|++.+++.+.||+. |..+..+. ..+.++
T Consensus 489 ~~~~~~--------~~~~a~---~~~~~~~~~~~~~~~L~Ei--~fG~wEG~t~~ei~~~~p~~-~~~~~~d~-~~~~~P 553 (664)
T PTZ00322 489 SILQQS--------TASAAS---SQSPSLNCRVLYFPTLDDI--NHGDCEGQLLSDVRRTMPNT-LQSMKADP-YYTAWP 553 (664)
T ss_pred cccccc--------cccccc---cccccccccccchhhhCcC--CCcccCCCCHHHHHHhCcHH-HHHHHhCC-CcCCCC
Confidence 100000 000000 0000001356778899998 57889999999999999963 55554321 223457
Q ss_pred cccCHHHHH-HHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCC-----CCCCcccccccCccCceEEEEEEeec
Q 043114 175 VREANEEVA-KRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGND-----CHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 175 ~~Es~~~~~-~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~-----~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
+|||..++. .|+..++..+.. ..++|||||||++|++++..+.+. ..... ....+++++++.+.+.+.
T Consensus 554 ~GES~~d~~~~R~~~~i~~l~~-~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~---~~~~i~~~~~~~i~~~~~ 627 (664)
T PTZ00322 554 NGECIHQVFNARLEPHIHDIQA-STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNA---YKIDIPFEHVIKIRMVGF 627 (664)
T ss_pred CCcCHHHHHHHHHHHHHHHHHc-cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccC---ceeeccCCcEEEEEEecc
Confidence 899999966 799999999854 347899999999999999988652 11112 256788999999988764
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.94 E-value=4.8e-26 Score=201.13 Aligned_cols=164 Identities=23% Similarity=0.190 Sum_probs=116.7
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCC---CCCHhHHHHHHHHHHHHHHcCCC----CCcCEEEECchhhHHHHH
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDA---HLTPLGWQQVSNLHKHVHETGLA----KKIELVITSPLLRTMQTA 88 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~---~LT~~G~~QA~~l~~~L~~~~~~----~~~~~i~sSpl~Ra~qTA 88 (264)
++||||||||+.++ +..|. +||+.|++||+++|++|++.... .++++||||||.||+|||
T Consensus 103 ~~L~LVRHGq~~~~-------------~~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTA 169 (299)
T PTZ00122 103 RQIILVRHGQYINE-------------SSNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETA 169 (299)
T ss_pred eEEEEEECCCCCCC-------------CCCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHH
Confidence 78999999996543 12344 49999999999999999863111 169999999999999999
Q ss_pred HHhhCCCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCC
Q 043114 89 VGVFGGEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDD 168 (264)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~ 168 (264)
+++.+..+ ..++.++++|+|.. .... .|. .
T Consensus 170 eiIa~~~~---------------------------~~~v~~d~~LrEG~---~~~~----------~~~----------~ 199 (299)
T PTZ00122 170 EIISEAFP---------------------------GVRLIEDPNLAEGV---PCAP----------DPP----------S 199 (299)
T ss_pred HHHHHhCC---------------------------CCCceeCcccccCC---cccc----------Ccc----------c
Confidence 99876531 13566788999842 1100 000 0
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHcCC----CCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEe
Q 043114 169 ILWTADVREANEEVAKRGMKFVNWLWTRK----EKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIV 244 (264)
Q Consensus 169 ~~w~~~~~Es~~~~~~R~~~~l~~l~~~~----~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~ 244 (264)
..+.++++|+ .++.+|+..+++.+..+. ++++||||||++|+++++.+.+.....+ ..+.++||+|+.+++.
T Consensus 200 ~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~~---~~~~~~N~sit~l~~~ 275 (299)
T PTZ00122 200 RGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEAW---LRLSLYNCGITWIVIS 275 (299)
T ss_pred cccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHHH---hhccCCCceEEEEEEe
Confidence 1233444455 677999999999987432 3568999999999999988755322211 2457899999999997
Q ss_pred ec
Q 043114 245 DR 246 (264)
Q Consensus 245 d~ 246 (264)
++
T Consensus 276 ~~ 277 (299)
T PTZ00122 276 SE 277 (299)
T ss_pred CC
Confidence 53
No 25
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.7e-26 Score=188.80 Aligned_cols=194 Identities=16% Similarity=0.124 Sum_probs=148.4
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|+.++|+|||||+||..+.+. +|.|++||+.|+.||...|+.|++.++ .||.+|||-++||++|+.++++.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFt-------GW~Dv~LtekG~~EA~~ag~llk~~~~--~~dia~TS~L~RAi~T~~i~L~e 71 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFT-------GWVDVDLTEKGISEAKAAGKLLKEEGL--EFDIAYTSVLKRAIKTLNIVLEE 71 (230)
T ss_pred CceEEEEecCchhhhhcCcee-------eeeecCcchhhHHHHHHHHHHHHHcCC--CcceeehHHHHHHHHHHHHHhhh
Confidence 567999999999999999886 999999999999999999999999876 99999999999999999999886
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCC--------
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESN-------- 166 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~-------- 166 (264)
.... . .|++..-+|.|+ .++...|..+.+..+.|++-++..|...
T Consensus 72 ~d~~------------------------~-ipv~kswrLNER--hYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~ 124 (230)
T COG0588 72 SDQL------------------------W-IPVIKSWRLNER--HYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKL 124 (230)
T ss_pred hccc------------------------C-cchhhHHHhhhh--hhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCc
Confidence 4210 0 233333467777 4667788887777777653221111110
Q ss_pred ---------CCCCCC------CCcccCHHHHHHHHHHHHHHHHc---CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccc
Q 043114 167 ---------DDILWT------ADVREANEEVAKRGMKFVNWLWT---RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSE 228 (264)
Q Consensus 167 ---------~~~~w~------~~~~Es~~~~~~R~~~~l~~l~~---~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~ 228 (264)
.+..+. -+..||..+...|+.-+++..+. ..+++|+||+||+.||++++.|.+-+++.+
T Consensus 125 ~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI--- 201 (230)
T COG0588 125 EKDDERSPHRDRRYAHLDIGGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDI--- 201 (230)
T ss_pred ccccccccccccccccccccCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHh---
Confidence 011111 12459999999999999998543 578999999999999999999976555544
Q ss_pred cccCccCceEEEEEEeecc
Q 043114 229 ICTHFANCELRSMVIVDRS 247 (264)
Q Consensus 229 ~~~~~~n~~v~~~~~~d~~ 247 (264)
....++|+.=..|+++++.
T Consensus 202 ~~l~IPtg~Plvyeld~~l 220 (230)
T COG0588 202 LDLNIPTGIPLVYELDKNL 220 (230)
T ss_pred hhcccCCCCcEEEEECCCC
Confidence 3568888888889998876
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.93 E-value=4.3e-25 Score=176.84 Aligned_cols=143 Identities=26% Similarity=0.319 Sum_probs=112.3
Q ss_pred EEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCC
Q 043114 17 TIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 17 ~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
+|||||||++.+|...... +..|.+||+.|++||+.+++.|+..+. +++.|||||+.||+|||+.+.+...
T Consensus 1 ~i~liRHg~~~~~~~~~~~-------~~~d~~Lt~~G~~qa~~~~~~l~~~~~--~~~~i~~Sp~~Ra~qTa~~l~~~~~ 71 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQ-------GWTDVPLTEKGREQARALGKRLKELGI--KFDRIYSSPLKRAIQTAEIILEELP 71 (153)
T ss_pred CEEEEECCCCcccccCccc-------CCCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECcHHHHHHHHHHHHHhcC
Confidence 4899999999998775432 678999999999999999999987432 7999999999999999998876420
Q ss_pred CCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCcc
Q 043114 97 YADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVR 176 (264)
Q Consensus 97 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~ 176 (264)
..++...+.|+|
T Consensus 72 ---------------------------~~~~~~~~~L~e----------------------------------------- 83 (153)
T cd07067 72 ---------------------------GLPVEVDPRLRE----------------------------------------- 83 (153)
T ss_pred ---------------------------CCCceeCccchH-----------------------------------------
Confidence 012333333332
Q ss_pred cCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 177 EANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
.|+..+++.+... .+++|+|||||++|+.++..+.+.....+ ....++||+++.+++.+.
T Consensus 84 -------~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~s~~~~~~~~~ 144 (153)
T cd07067 84 -------ARVLPALEELIAPHDGKNVLIVSHGGVLRALLAYLLGLSDEDI---LRLNLPNGSISVLELDEN 144 (153)
T ss_pred -------HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhCCCHHHH---HhcCCCCceEEEEEEeCC
Confidence 8999999998764 57889999999999999998865432211 246899999999999875
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.88 E-value=1.1e-21 Score=156.32 Aligned_cols=141 Identities=26% Similarity=0.275 Sum_probs=108.9
Q ss_pred EEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCCC
Q 043114 17 TIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 17 ~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
+|+|||||++.++..+... +..|.+||+.|++||..+++.|++.. .+++.|||||+.||+|||+.+...+.
T Consensus 1 ~i~liRHg~~~~~~~~~~~-------~~~d~~Lt~~G~~qa~~l~~~l~~~~--~~~~~v~sSp~~R~~~Ta~~~~~~~~ 71 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFT-------GWGDGPLTEKGRQQARELGKALRERY--IKFDRIYSSPLKRAIQTAEIILEGLF 71 (153)
T ss_pred CEEEEeCCCCccccCCCcc-------CCCCCCcCHHHHHHHHHHHHHHHHhC--CCCCEEEECChHHHHHHHHHHHHHhc
Confidence 4899999999998776533 67899999999999999999998743 27899999999999999998876531
Q ss_pred CCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCcc
Q 043114 97 YADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADVR 176 (264)
Q Consensus 97 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~ 176 (264)
. ..++...+.
T Consensus 72 ~--------------------------~~~~~~~~~-------------------------------------------- 81 (153)
T cd07040 72 E--------------------------GLPVEVDPR-------------------------------------------- 81 (153)
T ss_pred C--------------------------CCCeEECHH--------------------------------------------
Confidence 0 011110000
Q ss_pred cCHHHHHHHHHHHHHHHHcC---CCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 177 EANEEVAKRGMKFVNWLWTR---KEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~---~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
.|+..++..+... .+++++||||+++|+.++..+........ ....+.+|++..+++...
T Consensus 82 -------~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (153)
T cd07040 82 -------ARVLNALLELLARHLLDGKNVLIVSHGGTIRALLAALLGLSDEEI---LSLNLPNGSILVLELDEC 144 (153)
T ss_pred -------HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHh---ccccCCCCceEEEEEcCC
Confidence 8888888887654 57889999999999999999876432211 246889999999998765
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.83 E-value=2.5e-19 Score=143.76 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=99.5
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
++|||||||++.++.. +..|.+||+.|++||+.+++.|++.+. .++.|||||+.||+|||+.+.+..
T Consensus 1 m~l~LvRHg~a~~~~~-----------~d~dr~Lt~~G~~qa~~~~~~l~~~~~--~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA-----------SDSVRPLTTNGCDESRLVAQWLKGQGV--EIERILVSPFVRAEQTAEIVGDCL 67 (152)
T ss_pred CEEEEEeCCCcccccC-----------CCCCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEECCcHHHHHHHHHHHHHc
Confidence 3699999999988753 345789999999999999999987543 789999999999999999887653
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCc
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADV 175 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~ 175 (264)
+.+ ..+...+ ..+ +
T Consensus 68 ~~~--------------------------~~~~~~~-------------------------------------~l~-p-- 81 (152)
T TIGR00249 68 NLP--------------------------SSAEVLE-------------------------------------GLT-P-- 81 (152)
T ss_pred CCC--------------------------cceEEcc-------------------------------------CcC-C--
Confidence 210 0111000 000 1
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 176 REANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
+++..+ +..+++.+.....++++||+|+..|..++..|..... ...+..|++..+++++.
T Consensus 82 ~~~~~~----~~~~l~~~~~~~~~~vliVgH~P~i~~l~~~l~~~~~-------~~~~~~~~~~~l~~~~~ 141 (152)
T TIGR00249 82 CGDIGL----VSDYLEALTNEGVASVLLVSHLPLVGYLVAELCPGEN-------PIMFTTGAIASLLWDES 141 (152)
T ss_pred CCCHHH----HHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhCCCC-------CCcCcceeEEEEEEecC
Confidence 122333 3444444443345789999999999999998854321 24788999999999644
No 29
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.5e-19 Score=154.73 Aligned_cols=172 Identities=20% Similarity=0.192 Sum_probs=125.3
Q ss_pred eeeEEEEEeCCccccCcccccCcc--------cc-----------------CCCCCCCCCCCHhHHHHHHHHHHHHHHcC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHD--------AY-----------------LSYDLFDAHLTPLGWQQVSNLHKHVHETG 68 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~--------~~-----------------~~~~~~D~~LT~~G~~QA~~l~~~L~~~~ 68 (264)
..+.|++|||||+.+|..+. .|. .| ..+...|+|||..|..||+.+|+.|.+.+
T Consensus 11 ~~~~i~vmRHgERvD~if~~-~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 11 VPRNIFVMRHGERVDNIFGK-LWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCceEEEEEcccccccccch-hhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcC
Confidence 46789999999999866543 111 11 11245599999999999999999999887
Q ss_pred CCCCcCEEEECchhhHHHHHHHhhCCCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCC---
Q 043114 69 LAKKIELVITSPLLRTMQTAVGVFGGEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKR--- 145 (264)
Q Consensus 69 ~~~~~~~i~sSpl~Ra~qTA~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g--- 145 (264)
+ .+++|||||..||+|||..+.+.++... ...+.++++|-|.. ..+..+
T Consensus 90 ~--~i~~ifcSPs~r~VqTa~~i~~~~g~e~------------------------~~~i~vePgL~e~~--~~~~~~~~p 141 (272)
T KOG3734|consen 90 I--AIDVIFCSPSLRCVQTAAKIKKGLGIEK------------------------KLKIRVEPGLFEPE--KWPKDGKFP 141 (272)
T ss_pred C--CcceeecCCchhHHHHHHHHHHhhchhc------------------------CeeEEecchhcchh--hhcccCCCC
Confidence 6 8999999999999999999998765211 13566778888873 222222
Q ss_pred C--CHHHHHHhCCCCCccccCCCCCCCC--CCCcccCHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHHHHHHHHHhhcC
Q 043114 146 R--SITEYKSLFPAINFSLIESNDDILW--TADVREANEEVAKRGMKFVNWLWT-RKEKEIAVVTHSGFLYHTLSAFGN 219 (264)
Q Consensus 146 ~--~~~~l~~~~p~~~~~~~~~~~~~~w--~~~~~Es~~~~~~R~~~~l~~l~~-~~~~~vlvVsHg~~i~~ll~~l~~ 219 (264)
. +..++...++.+|. ..++.| .+.++||.+++.+|...+++.|+. .++++||||+||..+.+..+.|.+
T Consensus 142 ~~is~~el~~~~~~VD~-----~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~ 215 (272)
T KOG3734|consen 142 FFISPDELKFPGFPVDL-----NYDPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQG 215 (272)
T ss_pred CcCCHHHHhccCCCccc-----ccchhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcC
Confidence 1 34455554443322 122222 256789999999999999999876 456779999999999998888855
No 30
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.81 E-value=8.7e-19 Score=141.58 Aligned_cols=139 Identities=16% Similarity=0.132 Sum_probs=96.4
Q ss_pred eEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCCC
Q 043114 16 KTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 16 ~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
++|||||||++.+|.. ...|.+||+.|++||+.++++|+..++ .+|.|||||+.||+|||+++.+..
T Consensus 1 m~l~lvRHg~a~~~~~-----------~d~~rpLt~~G~~qa~~~~~~l~~~~~--~~d~i~sSp~~Ra~qTa~~l~~~~ 67 (159)
T PRK10848 1 MQVFIMRHGDAALDAA-----------SDSVRPLTTCGCDESRLMANWLKGQKV--DIERVLVSPYLRAEQTLEVVGECL 67 (159)
T ss_pred CEEEEEeCCCCCCCCC-----------CCcCCCcCHHHHHHHHHHHHHHHhCCC--CCCEEEECCHHHHHHHHHHHHHHh
Confidence 3699999999988742 345789999999999999999987544 789999999999999999887643
Q ss_pred CCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCCc
Q 043114 96 GYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTADV 175 (264)
Q Consensus 96 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~~ 175 (264)
+.. ..+.. ..+ +.+.
T Consensus 68 ~~~--------------------------~~~~~---~~~-----------------------------------l~~~- 82 (159)
T PRK10848 68 NLP--------------------------ASAEV---LPE-----------------------------------LTPC- 82 (159)
T ss_pred CCC--------------------------CceEE---ccC-----------------------------------CCCC-
Confidence 110 01110 000 0010
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEe
Q 043114 176 REANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIV 244 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~ 244 (264)
.+. ..+..+++.+.....++|+||+|.-.|..+...|...... ..|.+|.+..++|+
T Consensus 83 -~~~----~~~~~~l~~~~~~~~~~vllVgH~P~l~~l~~~L~~~~~~-------~~~~t~~i~~l~~~ 139 (159)
T PRK10848 83 -GDV----GLVSAYLQALANEGVASVLVISHLPLVGYLVAELCPGETP-------PMFTTSAIACVTLD 139 (159)
T ss_pred -CCH----HHHHHHHHHHHhcCCCeEEEEeCcCcHHHHHHHHhCCCCC-------CCcCCceEEEEEec
Confidence 011 1333444444334457899999999999998887543211 24889999999997
No 31
>PRK06193 hypothetical protein; Provisional
Probab=99.78 E-value=4.2e-18 Score=142.18 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=95.3
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
...+|||||||++.+|..+...... +....|.+||+.|+.||..+++.|++.++ +++.|||||+.||+|||++++.
T Consensus 41 ~~~~L~LvRHGet~~n~~~~~~gd~--d~~~~~rpLt~~G~~qA~~l~~~L~~~~~--~~d~V~sSpl~Ra~qTA~il~~ 116 (206)
T PRK06193 41 KGGYVIYFRHAATDRSQADQDTSDM--DDCSTQRNLSEEGREQARAIGEAFRALAI--PVGKVISSPYCRAWETAQLAFG 116 (206)
T ss_pred cCCEEEEEeCccCCCCccCCccccc--ccCcCCCCCCHHHHHHHHHHHHHHHhcCC--CCCEEEECCcHHHHHHHHHHhc
Confidence 5678999999999888765433100 00122579999999999999999997554 7999999999999999998764
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTA 173 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~ 173 (264)
... .+ ..+.+ +.. . .
T Consensus 117 ~~~----------------------------~~----~~l~~------------------------~~~---~------~ 131 (206)
T PRK06193 117 RHE----------------------------KE----IRLNF------------------------LNS---E------P 131 (206)
T ss_pred ccc----------------------------cC----ccccc------------------------ccc---c------C
Confidence 210 00 00000 000 0 1
Q ss_pred CcccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhh
Q 043114 174 DVREANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAF 217 (264)
Q Consensus 174 ~~~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l 217 (264)
...|+.+.+.+|+..+++.+. ...++|+||+|+..|+.++..+
T Consensus 132 ~~~~~~~~y~~~l~~~I~~l~-~~~~~vLlVgHnp~i~~l~g~~ 174 (206)
T PRK06193 132 VPAERNALLKAGLRPLLTTPP-DPGTNTVLVGHDDNLEAATGIY 174 (206)
T ss_pred CChhhHHHHHHHHHHHHhhCC-CCCCeEEEEeCchHHHHHhCCC
Confidence 124677788899999999885 5567899999999999887644
No 32
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.74 E-value=2.4e-17 Score=134.86 Aligned_cols=165 Identities=19% Similarity=0.194 Sum_probs=110.0
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
....|+||||||-... +.. ..||+.|++||+.+|++|++.|+ ++|.|+.|.|.||.+||.+|++
T Consensus 93 atRhI~LiRHgeY~~~-------------g~~-~hLTelGReQAE~tGkRL~elgl--k~d~vv~StM~RA~ETadIIlk 156 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHVD-------------GSL-EHLTELGREQAELTGKRLAELGL--KFDKVVASTMVRATETADIILK 156 (284)
T ss_pred hhceEEEEeccceecc-------------Cch-hhcchhhHHHHHHHhHHHHHcCC--chhhhhhhhhhhhHHHHHHHHH
Confidence 3567999999994321 222 38999999999999999999988 9999999999999999999999
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTA 173 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~ 173 (264)
+++.. ...+..+.|+|-- + || .... -.-|++
T Consensus 157 ~l~d~--------------------------lk~~s~~ll~EGa---P-------------~p-----pdPp--~k~wrp 187 (284)
T KOG4609|consen 157 HLPDD--------------------------LKRVSCPLLREGA---P-------------YP-----PDPP--VKHWRP 187 (284)
T ss_pred hCCCc--------------------------cceecccccccCC---C-------------CC-----CCCC--cccCCc
Confidence 87511 1234455666641 1 11 0000 112433
Q ss_pred CcccCHHHHHHHHHHHHHHHHc------CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeecc
Q 043114 174 DVREANEEVAKRGMKFVNWLWT------RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRS 247 (264)
Q Consensus 174 ~~~Es~~~~~~R~~~~l~~l~~------~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~ 247 (264)
-. --+..=-.|+...+...+- ..+.-.|||+|++|||.+++.-..-... -| .++.+.||+|+.+++...+
T Consensus 188 ~~-~qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~HaNVIRY~icRALq~Ppe-gW--lR~nlnh~SiTWlti~PsG 263 (284)
T KOG4609|consen 188 LD-PQYYRDGARIEAAFRRYFHRASPSQEEDSYELIVCHANVIRYFICRALQFPPE-GW--LRMNLNHCSITWLTISPSG 263 (284)
T ss_pred cC-hHhhhcchHHHHHHHHHHhhcCcccccccEEEEEeecchhhhhhhhhhcCCcc-hh--heecccCcceEEEEEccCC
Confidence 11 1111223688877776542 2234589999999999887633221111 12 4789999999999987543
No 33
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.72 E-value=1.1e-16 Score=128.36 Aligned_cols=143 Identities=19% Similarity=0.218 Sum_probs=102.3
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|++|||+|||++.+...+. ...|-+||+.|+++|+.+|+.|++.+. .+|+|+|||..||+|||+++.+.
T Consensus 1 m~~L~LmRHgkA~~~~~~~---------~D~dR~Lt~~G~~ea~~~a~~L~~~~~--~~D~VL~Spa~Ra~QTae~v~~~ 69 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGI---------ADFDRPLTERGRKEAELVAAWLAGQGV--EPDLVLVSPAVRARQTAEIVAEH 69 (163)
T ss_pred CceEEEeecccccccCCCC---------CCccCcCCHHHHHHHHHHHHHHHhcCC--CCCEEEeChhHHHHHHHHHHHHh
Confidence 6899999999999876542 356899999999999999999998876 89999999999999999998886
Q ss_pred CCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCCC
Q 043114 95 EGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTAD 174 (264)
Q Consensus 95 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~~ 174 (264)
.+. + .. |. |+. .. +
T Consensus 70 ~~~-~--------------------------~~-------~~------------------~~~-----l~---------p 83 (163)
T COG2062 70 LGE-K--------------------------KV-------EV------------------FEE-----LL---------P 83 (163)
T ss_pred hCc-c--------------------------cc-------ee------------------ccc-----cC---------C
Confidence 420 0 00 11 000 00 0
Q ss_pred cccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 175 VREANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 175 ~~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
. ..... +...++.+.. .-.+++||+|--.+..++..|..+ ......|....|..++|+..
T Consensus 84 ~-~d~~~----~l~~l~~~~d-~v~~vllVgH~P~l~~l~~~L~~~------~~~~~~fptsgia~l~~~~~ 143 (163)
T COG2062 84 N-GDPGT----VLDYLEALGD-GVGSVLLVGHNPLLEELALLLAGG------ARLPVKFPTSGIAVLEFDGK 143 (163)
T ss_pred C-CCHHH----HHHHHHHhcc-cCceEEEECCCccHHHHHHHHccc------cccccCCCcccEEEEEeccc
Confidence 0 01111 2222222221 346799999999999999988654 11246888999999999865
No 34
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.70 E-value=4.3e-16 Score=129.13 Aligned_cols=69 Identities=20% Similarity=0.109 Sum_probs=52.5
Q ss_pred eeeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhC
Q 043114 14 RSKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~ 93 (264)
..++||||||||+.....+.. ...+.|||+.|++||+.+++.|++.. ..|.|||||+.||+|||+++.+
T Consensus 53 ~~~~L~LiRHGet~~~~~~~~--------~sD~RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 53 QHPVVVLFRHAERCDRSDNQC--------LSDKTGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CCCEEEEEeCccccCccCCCC--------CCCCCCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 456799999999832221110 11126899999999999999998632 3489999999999999998765
No 35
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.66 E-value=2.4e-15 Score=135.96 Aligned_cols=159 Identities=25% Similarity=0.223 Sum_probs=120.2
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCCCCCcC-EEEECchhhHHHHHHHhhC
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGLAKKIE-LVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~~~~~~-~i~sSpl~Ra~qTA~~~~~ 93 (264)
...|||.||||+.+|..++ ...|++|++.|.+=|+.+++++.+.. ..+ .||||++.||+|||+ .+.
T Consensus 239 pR~i~l~r~geS~~n~~gr---------iggds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~-~l~ 305 (438)
T KOG0234|consen 239 PRTIYLTRHGESEFNVEGR---------IGGDSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAE-GLK 305 (438)
T ss_pred CceEEEEecCCCccccccc---------cCCcccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHh-hcC
Confidence 4579999999999999887 44589999999999999999998754 455 899999999999998 333
Q ss_pred CCCCCCCCCCCcccccccCCCcccccccCCCCCeeccccchhhcCCCCCCCCCCHHHHHHhCCCCCccccCCCCCCCCCC
Q 043114 94 GEGYADGIDAPPLMVADAGNSNHAAISSLNSPPFIAVELCREHLGVHPCDKRRSITEYKSLFPAINFSLIESNDDILWTA 173 (264)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~l~E~~~~~~~~~g~~~~~l~~~~p~~~~~~~~~~~~~~w~~ 173 (264)
-. + .......|+|+ ..+.-.|++.+++++.||.. |.....++ ..+.-
T Consensus 306 ~~-~----------------------------~~~~~~~Ldei--~ag~~~g~t~eeI~~~~p~e-~~~r~~dk-y~yry 352 (438)
T KOG0234|consen 306 LD-Y----------------------------SVEQWKALDEI--DAGVCEGLTYEEIETNYPEE-FALRDKDK-YRYRY 352 (438)
T ss_pred cc-h----------------------------hhhhHhhcCcc--cccccccccHHHHHHhCchh-hhhccCCc-ceeec
Confidence 11 0 01123346666 23445788999999999962 43333222 22444
Q ss_pred CcccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCCC
Q 043114 174 DVREANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGNDC 221 (264)
Q Consensus 174 ~~~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~~ 221 (264)
+++||+.++..|+.-+|-.+..+ .+|+|+||..+||+++..|....
T Consensus 353 ~~gESy~D~v~RlePvImElEr~--~~Vlvi~Hqavircll~Yf~~~~ 398 (438)
T KOG0234|consen 353 PGGESYSDLVQRLEPVIMELERQ--ENVLVITHQAVIRCLLAYFLNCS 398 (438)
T ss_pred CCCCCHHHHHHhhhhHhHhhhhc--ccEEEEecHHHHHHHHHHHhcCC
Confidence 57999999999999999888533 33999999999999999886554
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.00 E-value=9.7e-06 Score=69.59 Aligned_cols=63 Identities=25% Similarity=0.269 Sum_probs=50.9
Q ss_pred eeEEEEEeCCccccCcccccCccccCCCCCCCCCCCHhHHHHHHHHHHHHHHcCC--------CCCcCEEEECchhhHHH
Q 043114 15 SKTIHLVRHAQGIHNVEGEKNHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHETGL--------AKKIELVITSPLLRTMQ 86 (264)
Q Consensus 15 ~~~i~lvRHGes~~n~~~~~~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~~~--------~~~~~~i~sSpl~Ra~q 86 (264)
...++++|||++.- ..||..|++|+..+|++|++.-. ....-.|++|+..||+|
T Consensus 3 ~~v~~~~RHg~r~p------------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~ 64 (242)
T cd07061 3 EQVQVLSRHGDRYP------------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQ 64 (242)
T ss_pred EEEEEEEecCCCCc------------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHH
Confidence 35688999999741 57999999999999999987421 11233899999999999
Q ss_pred HHHHhhCCC
Q 043114 87 TAVGVFGGE 95 (264)
Q Consensus 87 TA~~~~~~~ 95 (264)
||+.++.++
T Consensus 65 Sa~~~~~gl 73 (242)
T cd07061 65 SAQAFLAGL 73 (242)
T ss_pred HHHHHHHhc
Confidence 999998875
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.34 E-value=0.00026 Score=63.24 Aligned_cols=50 Identities=30% Similarity=0.294 Sum_probs=40.1
Q ss_pred CCCCHhHHHHHHHHHHHHHHcC--CC-C----CcCEEEECchhhHHHHHHHhhCCCC
Q 043114 47 AHLTPLGWQQVSNLHKHVHETG--LA-K----KIELVITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 47 ~~LT~~G~~QA~~l~~~L~~~~--~~-~----~~~~i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
..||+.|.+|...+|++|++.- +. . .--.|++|...||++||+.++.++-
T Consensus 61 g~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 61 GQLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp TSBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 3499999999999999999752 21 1 1237999999999999998888753
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=96.59 E-value=0.01 Score=55.10 Aligned_cols=83 Identities=16% Similarity=0.129 Sum_probs=54.6
Q ss_pred eeeEEEEEeCCcccc-Cc-ccccCcc--ccCCCCCCCCCCCHhHHHHHHHHHHHHHH---cCC---CCCc----CEEEEC
Q 043114 14 RSKTIHLVRHAQGIH-NV-EGEKNHD--AYLSYDLFDAHLTPLGWQQVSNLHKHVHE---TGL---AKKI----ELVITS 79 (264)
Q Consensus 14 ~~~~i~lvRHGes~~-n~-~~~~~~~--~~~~~~~~D~~LT~~G~~QA~~l~~~L~~---~~~---~~~~----~~i~sS 79 (264)
-...-++-|||.+.= +. -....+. .++..|+ -.||+.|.+|+..+|+.|++ ... ...+ -.|.||
T Consensus 34 Lefv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~--GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRSt 111 (411)
T KOG3720|consen 34 LEFVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGW--GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRST 111 (411)
T ss_pred eEEEEEEeecCCCCcccCCCCCCcccccccCCCCc--chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecC
Confidence 455677889997652 21 1110111 1221222 57999999999999999998 311 1112 178999
Q ss_pred chhhHHHHHHHhhCCCCCC
Q 043114 80 PLLRTMQTAVGVFGGEGYA 98 (264)
Q Consensus 80 pl~Ra~qTA~~~~~~~~~~ 98 (264)
+.-||+.||.-+++++--+
T Consensus 112 d~nRtl~SAqs~laGlfp~ 130 (411)
T KOG3720|consen 112 DVNRTLMSAQSVLAGLFPP 130 (411)
T ss_pred CccHHHHHHHHHHHhhCCC
Confidence 9999999999999887443
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.17 E-value=0.023 Score=52.82 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=52.0
Q ss_pred eeeEEEEEeCCccccCccc-c-c------CccccCCCCCCCCCCCHhHHHHHHHHHHHHHHc----CCCCC-------cC
Q 043114 14 RSKTIHLVRHAQGIHNVEG-E-K------NHDAYLSYDLFDAHLTPLGWQQVSNLHKHVHET----GLAKK-------IE 74 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~-~-~------~~~~~~~~~~~D~~LT~~G~~QA~~l~~~L~~~----~~~~~-------~~ 74 (264)
-.+.++|.|||-+.--... . . .|+. | ....-.||.+|..+-..+|+++++. ++... .-
T Consensus 31 L~~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~-w--~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v 107 (413)
T PRK10173 31 LQQVLMMSRHNLRAPLANNGSVLEQSTPNAWPE-W--DVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTV 107 (413)
T ss_pred EEEEEEEeecccCCCCCCcchhhhhcCCCCCCC-C--CCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeE
Confidence 3467999999965322211 0 1 1211 1 2334679999999999998887753 33211 23
Q ss_pred EEEECchhhHHHHHHHhhCCC
Q 043114 75 LVITSPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 75 ~i~sSpl~Ra~qTA~~~~~~~ 95 (264)
.|++++..|+++||+.++.++
T Consensus 108 ~~~a~~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 108 YAYANSLQRTVATAQFFITGA 128 (413)
T ss_pred EEEeCCchHHHHHHHHHHHhc
Confidence 789999999999998776653
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.43 E-value=0.071 Score=49.76 Aligned_cols=82 Identities=17% Similarity=0.074 Sum_probs=51.4
Q ss_pred eeeEEEEEeCCccccCcccc-c-Ccc-ccCCC-CCCCCCCCHhHHHHHHHHHHHHHHcC----CCCC-----cC--EEEE
Q 043114 14 RSKTIHLVRHAQGIHNVEGE-K-NHD-AYLSY-DLFDAHLTPLGWQQVSNLHKHVHETG----LAKK-----IE--LVIT 78 (264)
Q Consensus 14 ~~~~i~lvRHGes~~n~~~~-~-~~~-~~~~~-~~~D~~LT~~G~~QA~~l~~~L~~~~----~~~~-----~~--~i~s 78 (264)
-.+.++|-|||-+.--.... . .+. ..|.. ....-.||.+|..|-..+|+++++.- +... .+ .|++
T Consensus 34 L~~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a 113 (436)
T PRK10172 34 LESVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIA 113 (436)
T ss_pred EEEEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEe
Confidence 34568899999764221110 0 100 00100 11236799999999999999888652 2211 12 6788
Q ss_pred CchhhHHHHHHHhhCCC
Q 043114 79 SPLLRTMQTAVGVFGGE 95 (264)
Q Consensus 79 Spl~Ra~qTA~~~~~~~ 95 (264)
++..||+.||+.++.++
T Consensus 114 ~~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 114 DVDQRTRKTGEAFLAGL 130 (436)
T ss_pred CCchHHHHHHHHHHHhc
Confidence 89999999998776654
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=92.40 E-value=0.12 Score=50.63 Aligned_cols=51 Identities=22% Similarity=0.063 Sum_probs=39.7
Q ss_pred CCCCHhHHHHHHHHHHHHHHcC-------CC------CCcCEEEECchhhHHHHHHHhhCCCCC
Q 043114 47 AHLTPLGWQQVSNLHKHVHETG-------LA------KKIELVITSPLLRTMQTAVGVFGGEGY 97 (264)
Q Consensus 47 ~~LT~~G~~QA~~l~~~L~~~~-------~~------~~~~~i~sSpl~Ra~qTA~~~~~~~~~ 97 (264)
-.||..|+.||++||+.++.-- +. ..--.||+|.-.|.+.||+..++++-.
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL~ 573 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLA 573 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHHh
Confidence 4689999999999999998631 10 112289999999999999988776543
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=84.22 E-value=2 Score=40.18 Aligned_cols=55 Identities=13% Similarity=-0.026 Sum_probs=42.0
Q ss_pred CCCCCCCCHhHHHHHHHHHHHHHHcC-CCCC--cCEEEECchhhHHHHHHHhhCCCCC
Q 043114 43 DLFDAHLTPLGWQQVSNLHKHVHETG-LAKK--IELVITSPLLRTMQTAVGVFGGEGY 97 (264)
Q Consensus 43 ~~~D~~LT~~G~~QA~~l~~~L~~~~-~~~~--~~~i~sSpl~Ra~qTA~~~~~~~~~ 97 (264)
+..+..|...|+..|+++++.+.+.- .... .-.|+++-..||..||+....++..
T Consensus 127 ~~~~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLfg 184 (467)
T KOG1382|consen 127 AELVDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLFG 184 (467)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhcc
Confidence 44567788999999999999887642 1112 2378999999999999998887753
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=60.15 E-value=13 Score=34.20 Aligned_cols=44 Identities=27% Similarity=0.236 Sum_probs=34.7
Q ss_pred CCCHhHHHHHHHHHHHHHHcCCC---------CCcC--EEEECchhhHHHHHHHh
Q 043114 48 HLTPLGWQQVSNLHKHVHETGLA---------KKIE--LVITSPLLRTMQTAVGV 91 (264)
Q Consensus 48 ~LT~~G~~QA~~l~~~L~~~~~~---------~~~~--~i~sSpl~Ra~qTA~~~ 91 (264)
-||.+|..|-..+|++++..-.. ..++ .|+|+-..|+.|+|..+
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~ 222 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAF 222 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHH
Confidence 48999999999999999865221 1123 48999999999999765
No 44
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=55.70 E-value=24 Score=31.47 Aligned_cols=41 Identities=12% Similarity=0.065 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHhhcCC
Q 043114 180 EEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLSAFGND 220 (264)
Q Consensus 180 ~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~~l~~~ 220 (264)
+.+..|+..++..+.+++.++|+||+||.--..+++.+...
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcC
Confidence 46777888888887778888899999999888777777544
No 45
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=48.89 E-value=17 Score=29.84 Aligned_cols=31 Identities=23% Similarity=0.221 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHHHHHHHc-CCCCeEEEEeCHH
Q 043114 178 ANEEVAKRGMKFVNWLWT-RKEKEIAVVTHSG 208 (264)
Q Consensus 178 s~~~~~~R~~~~l~~l~~-~~~~~vlvVsHg~ 208 (264)
+.+++.+|+..|++.|.+ .++..||+|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 456899999999999986 5678899999643
No 46
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=46.24 E-value=24 Score=27.09 Aligned_cols=39 Identities=15% Similarity=0.143 Sum_probs=22.6
Q ss_pred EEEEeCH-HHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeeccccCC
Q 043114 201 IAVVTHS-GFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDRSMIGS 251 (264)
Q Consensus 201 vlvVsHg-~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~~~~~~ 251 (264)
||||||| .+-..++..... +. +++.+..+-+.++..+|.
T Consensus 4 IVlVSHs~~lA~gl~~~~~~-----------i~-~~~~i~~~gg~~d~~~gt 43 (124)
T PRK14484 4 IVIVSHSKKIAEGVKDLIKQ-----------MA-PDVPIIYAGGTEDGRIGT 43 (124)
T ss_pred EEEEeCcHHHHHHHHHHHHH-----------hh-CCCCEEEecCCCCCCccc
Confidence 8999999 555555544321 12 456666666666554443
No 47
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=41.45 E-value=2.1e+02 Score=23.79 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=33.8
Q ss_pred CCCCCHhHHHHH----HHHHHHHHHcCCCCCcCEEEECchhhHHHHHHHhhCC
Q 043114 46 DAHLTPLGWQQV----SNLHKHVHETGLAKKIELVITSPLLRTMQTAVGVFGG 94 (264)
Q Consensus 46 D~~LT~~G~~QA----~~l~~~L~~~~~~~~~~~i~sSpl~Ra~qTA~~~~~~ 94 (264)
|-+-|..++.+- ..+|+.|.+.|+ -.-.-+.||++..+|-|..++..
T Consensus 69 dLgFs~edR~eniRRvaevAkll~daG~--iviva~ISP~r~~R~~aR~~~~~ 119 (197)
T COG0529 69 DLGFSREDRIENIRRVAEVAKLLADAGL--IVIVAFISPYREDRQMARELLGE 119 (197)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHCCe--EEEEEeeCccHHHHHHHHHHhCc
Confidence 566677776553 447778887664 33355899999999999987764
No 48
>PRK00865 glutamate racemase; Provisional
Probab=39.10 E-value=1.2e+02 Score=26.25 Aligned_cols=59 Identities=17% Similarity=0.301 Sum_probs=43.5
Q ss_pred CHHHHHHhCCCCCccccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHH
Q 043114 147 SITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLWTRKEKEIAVVTHSG 208 (264)
Q Consensus 147 ~~~~l~~~~p~~~~~~~~~~~~~~w~~~~~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~ 208 (264)
=..++.+.+|+.++-.+- |....|.+.-|.+++.+|+.+.++.|.+.+-+-|+|-|-..
T Consensus 20 vl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d~iVIaCNTa 78 (261)
T PRK00865 20 VLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGVKMLVIACNTA 78 (261)
T ss_pred HHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeCchH
Confidence 356778889987665553 34455666789999999999999999876556677776654
No 49
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=38.01 E-value=62 Score=27.62 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTL 214 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll 214 (264)
+-.+.+...+..+.+..+.+||+|||...+....
T Consensus 176 ~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 176 KTAKEVLELLRELNKERGKTIIMVTHDPELAKYA 209 (226)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhC
Confidence 4456666777777666678999999999877643
No 50
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=34.67 E-value=33 Score=29.72 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHH
Q 043114 177 EANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLY 211 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~ 211 (264)
|+.++...=+.+|++.-.+..+++|++||.||+.-
T Consensus 9 ~~~~d~~s~~~eFi~~q~s~~~rrIVlVTSGGTtV 43 (302)
T KOG2728|consen 9 ESLDDPGSLIEEFIKLQASLQGRRIVLVTSGGTTV 43 (302)
T ss_pred ccccchhHHHHHHHHHHhhccCceEEEEecCCeEe
Confidence 45555555577777776666677799999999743
No 51
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=34.64 E-value=59 Score=28.10 Aligned_cols=29 Identities=21% Similarity=0.226 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 180 EEVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 180 ~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
+.|.+++..-++.+.+.. ..||+|||..-
T Consensus 180 ~~F~~K~~~rl~e~~~~~-~tiv~VSHd~~ 208 (249)
T COG1134 180 AAFQEKCLERLNELVEKN-KTIVLVSHDLG 208 (249)
T ss_pred HHHHHHHHHHHHHHHHcC-CEEEEEECCHH
Confidence 578888888888886554 88999999863
No 52
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=32.57 E-value=35 Score=29.82 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=25.7
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 043114 176 REANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYH 212 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ 212 (264)
..|.++..+++.+.++...+- ...+++.+||+.|..
T Consensus 191 ~~sl~~a~~~~~~i~~aa~~v-~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 191 ALSLEEAAERIQEIFDAARAV-NPDIIVLCHGGPIAT 226 (268)
T ss_dssp S--HHHHHHHHHHHHHHHHCC--TT-EEEEECTTB-S
T ss_pred cCCHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCCCCC
Confidence 578999999999999887643 355789999999875
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=32.25 E-value=64 Score=27.92 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHH
Q 043114 180 EEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTL 214 (264)
Q Consensus 180 ~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll 214 (264)
+..+..++..+.+|++....+|++|||.--=...+
T Consensus 163 alTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~L 197 (248)
T COG1116 163 ALTREELQDELLRLWEETRKTVLLVTHDVDEAVYL 197 (248)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhh
Confidence 34556666777778878889999999986444333
No 54
>PRK00035 hemH ferrochelatase; Reviewed
Probab=32.00 E-value=1.5e+02 Score=26.47 Aligned_cols=33 Identities=9% Similarity=-0.111 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHH
Q 043114 180 EEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYH 212 (264)
Q Consensus 180 ~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ 212 (264)
+.+.+|+.+.+...... .+..+|++.||...+.
T Consensus 170 ~~l~~~I~~~~~~~~~~~~~~~llfs~HG~P~~~ 203 (333)
T PRK00035 170 EALAESIREALAKHGEDPEPDRLLFSAHGLPQRY 203 (333)
T ss_pred HHHHHHHHHHHHhcCcccCCcEEEEecCCCchHH
Confidence 34566666666544211 3457999999976664
No 55
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=31.65 E-value=1.2e+02 Score=25.82 Aligned_cols=41 Identities=22% Similarity=0.074 Sum_probs=32.1
Q ss_pred cCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHHHHHHHhh
Q 043114 177 EANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFLYHTLSAF 217 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i~~ll~~l 217 (264)
++.......+.++|..|.+. +.++|-|++|+.--+.++..|
T Consensus 70 ~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL 111 (233)
T PF05990_consen 70 ESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEAL 111 (233)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHH
Confidence 45556677778888888776 778899999998877777665
No 56
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=30.08 E-value=71 Score=31.40 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=28.4
Q ss_pred cccCHHHHHHHHHHHHHHHHcC-CCCeEEEEeCHHHH
Q 043114 175 VREANEEVAKRGMKFVNWLWTR-KEKEIAVVTHSGFL 210 (264)
Q Consensus 175 ~~Es~~~~~~R~~~~l~~l~~~-~~~~vlvVsHg~~i 210 (264)
..|...++..|++..++.+.+. .++.|+||+|+.--
T Consensus 188 ~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGg 224 (642)
T PLN02517 188 NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGV 224 (642)
T ss_pred chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCch
Confidence 3467788999999999988654 46789999997543
No 57
>PRK12435 ferrochelatase; Provisional
Probab=29.57 E-value=2e+02 Score=25.71 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=19.2
Q ss_pred CCCCCHhHHHHHHHHHHHHHHc
Q 043114 46 DAHLTPLGWQQVSNLHKHVHET 67 (264)
Q Consensus 46 D~~LT~~G~~QA~~l~~~L~~~ 67 (264)
-+||...-+.||+++.+.|.+.
T Consensus 52 ~SPL~~~T~~qa~~L~~~L~~~ 73 (311)
T PRK12435 52 ISPLAKITDEQAKALEKALNEV 73 (311)
T ss_pred cChHHHHHHHHHHHHHHHHhhc
Confidence 3799999999999999999753
No 58
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=29.00 E-value=65 Score=27.31 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTL 214 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll 214 (264)
-.++|++..+-++++..++-+++|||+-==..++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieEAlfl 199 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEEALFL 199 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhh
Confidence 4567888888888888889999999986544444
No 59
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=27.26 E-value=66 Score=28.33 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFLY 211 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~ 211 (264)
+...++.+.+..|. ..+..|++||||++--
T Consensus 31 ~~l~~l~~~i~~l~-~~g~~vilVssGAv~~ 60 (284)
T cd04256 31 GRLASIVEQVSELQ-SQGREVILVTSGAVAF 60 (284)
T ss_pred HHHHHHHHHHHHHH-HCCCEEEEEeeCcHHh
Confidence 44455555555553 3467799999999754
No 60
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=26.79 E-value=74 Score=29.30 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCeEEEEeCHH---HHHHHHHhh
Q 043114 178 ANEEVAKRGMKFVNWLWTRKEKEIAVVTHSG---FLYHTLSAF 217 (264)
Q Consensus 178 s~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~---~i~~ll~~l 217 (264)
...++..+++..++.+.+..++.|+||+|+. +++.+|...
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhc
Confidence 4558889999999988765588899999954 444555544
No 61
>PLN02449 ferrochelatase
Probab=26.63 E-value=1.6e+02 Score=28.11 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=29.1
Q ss_pred CCCCCHhHHHHHHHHHHHHHHcCCCCCcC----EEEECchhhHHHHHHHhhC
Q 043114 46 DAHLTPLGWQQVSNLHKHVHETGLAKKIE----LVITSPLLRTMQTAVGVFG 93 (264)
Q Consensus 46 D~~LT~~G~~QA~~l~~~L~~~~~~~~~~----~i~sSpl~Ra~qTA~~~~~ 93 (264)
.+||...-.+||+++.+.|.+.+. .+. .=|..|+.. ++.+.+.+
T Consensus 155 gSPL~~iT~~Qa~~Lq~~L~~~~~--~~~V~~aMRY~~P~ie--dal~~l~~ 202 (485)
T PLN02449 155 GSPLRKITDEQAEALAKALEAKNL--PAKVYVGMRYWHPFTE--EAIDQIKA 202 (485)
T ss_pred CCchHHHHHHHHHHHHHHHhccCC--CeEEEEhhhcCCCCHH--HHHHHHHh
Confidence 489999999999999999975432 222 226677654 34444443
No 62
>COG2893 ManX Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Probab=26.05 E-value=76 Score=24.99 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=15.6
Q ss_pred eEEEEeCHHHHHHHHHhhc
Q 043114 200 EIAVVTHSGFLYHTLSAFG 218 (264)
Q Consensus 200 ~vlvVsHg~~i~~ll~~l~ 218 (264)
.++|+|||.+-..+++.+.
T Consensus 3 ~iii~tHG~~A~~l~~s~e 21 (143)
T COG2893 3 GIIIATHGRFAEGLLNSLE 21 (143)
T ss_pred eEEEEeCHHHHHHHHHHHH
Confidence 4899999999888877663
No 63
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=25.42 E-value=74 Score=23.88 Aligned_cols=18 Identities=33% Similarity=0.482 Sum_probs=13.6
Q ss_pred eEEEEeCHHHHHHHHHhh
Q 043114 200 EIAVVTHSGFLYHTLSAF 217 (264)
Q Consensus 200 ~vlvVsHg~~i~~ll~~l 217 (264)
.+||+|||.+-..+...+
T Consensus 2 ~ili~sHG~~A~gi~~~~ 19 (122)
T cd00006 2 GIIIATHGGFASGLLNSA 19 (122)
T ss_pred eEEEEcCHHHHHHHHHHH
Confidence 489999998866666554
No 64
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=25.09 E-value=20 Score=31.48 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=41.5
Q ss_pred CCCCCHhHHHHHHHHHHHHHHcCCCCCcCE-EEECchhhHHHHHHHhhCCCC
Q 043114 46 DAHLTPLGWQQVSNLHKHVHETGLAKKIEL-VITSPLLRTMQTAVGVFGGEG 96 (264)
Q Consensus 46 D~~LT~~G~~QA~~l~~~L~~~~~~~~~~~-i~sSpl~Ra~qTA~~~~~~~~ 96 (264)
|.++...|..-+..+.++.+.. ...++|. |..|+..||++|+..+..+..
T Consensus 40 ~~~y~~~d~n~p~~l~qr~~~~-~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 40 DGKYVPDDMNMPFRLPQRIRSP-KGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCCcCCCCccCCccccccccCc-ccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 6889999999999999987642 2347777 999999999999999888754
No 65
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=25.05 E-value=1.8e+02 Score=26.69 Aligned_cols=48 Identities=8% Similarity=0.067 Sum_probs=30.5
Q ss_pred HHHHHHHHHc--CCCCeEEEEeCHHHHHHHHHhhcCCCCCCcccccccCccCceEEEEEEeec
Q 043114 186 GMKFVNWLWT--RKEKEIAVVTHSGFLYHTLSAFGNDCHPSIKSEICTHFANCELRSMVIVDR 246 (264)
Q Consensus 186 ~~~~l~~l~~--~~~~~vlvVsHg~~i~~ll~~l~~~~~~~~~~~~~~~~~n~~v~~~~~~d~ 246 (264)
++.+++.|.+ .-++.+|||||.....-+-..+ ..++-|.|.++-+--+
T Consensus 46 l~~li~sL~~~~~I~~~llifSHd~~~~ein~~v-------------~~I~Fc~v~QIf~P~S 95 (356)
T PF05060_consen 46 LKLLIDSLSQARGIEEALLIFSHDFYSEEINDLV-------------QSIDFCRVMQIFYPYS 95 (356)
T ss_pred HHHHHHHHHHhhCccceEEEEeccCChHHHHHHH-------------HhCCcceeEEEecccc
Confidence 3344555543 2357899999999877654332 2456688888876544
No 66
>PF13479 AAA_24: AAA domain
Probab=24.82 E-value=1e+02 Score=25.61 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=28.8
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHH
Q 043114 176 REANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLY 211 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~ 211 (264)
+--|.++..+..++++.+....+.+||+++|...-.
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~ 140 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEE 140 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEE
Confidence 345778889999999987766788999999987544
No 67
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=24.80 E-value=57 Score=24.22 Aligned_cols=18 Identities=17% Similarity=0.230 Sum_probs=13.7
Q ss_pred eEEEEeCHHHHHHHHHhh
Q 043114 200 EIAVVTHSGFLYHTLSAF 217 (264)
Q Consensus 200 ~vlvVsHg~~i~~ll~~l 217 (264)
.|||+|||.+-..+...+
T Consensus 1 giii~sHG~~A~g~~~~~ 18 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLESA 18 (116)
T ss_dssp EEEEEEETTHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHH
Confidence 379999998877766554
No 68
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=24.42 E-value=1.3e+02 Score=25.24 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=26.1
Q ss_pred ccCHHHHHHHHHHHHHHHH-cCCCCeEEEEeCHHHHHHHH
Q 043114 176 REANEEVAKRGMKFVNWLW-TRKEKEIAVVTHSGFLYHTL 214 (264)
Q Consensus 176 ~Es~~~~~~R~~~~l~~l~-~~~~~~vlvVsHg~~i~~ll 214 (264)
++...++.++..++++..+ +..++.+|||||-.+....+
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~ 180 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFI 180 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHh
Confidence 3556677777777776643 34557799999987655433
No 69
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=23.68 E-value=79 Score=27.17 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHH
Q 043114 177 EANEEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYH 212 (264)
Q Consensus 177 Es~~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ 212 (264)
+|.+|..+|+.+.+.. ..+++..|+|||+.+...
T Consensus 127 ~s~~eA~~~ive~~~~--~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 127 ISLEESAQRIIAAAKK--APPDLPLILLAHNGPSGL 160 (238)
T ss_pred CCHHHHHHHHHHHhhh--cCCCCCeEEEeCcCCcCC
Confidence 5677777777776642 245566789999997553
No 70
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=22.68 E-value=1.3e+02 Score=24.79 Aligned_cols=29 Identities=31% Similarity=0.275 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
...+++.+.+..+.+..+..|++|||..-
T Consensus 174 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 202 (218)
T cd03255 174 ETGKEVMELLRELNKEAGTTIVVVTHDPE 202 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEECCHH
Confidence 44556666677665434678999999864
No 71
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=22.61 E-value=3.5e+02 Score=23.24 Aligned_cols=56 Identities=13% Similarity=0.184 Sum_probs=40.0
Q ss_pred HHHHHHhCCCCCccccCCCCCCCCCCCcccCHHHHHHHHHHHHHHHH-cCCCCeEEEEeC
Q 043114 148 ITEYKSLFPAINFSLIESNDDILWTADVREANEEVAKRGMKFVNWLW-TRKEKEIAVVTH 206 (264)
Q Consensus 148 ~~~l~~~~p~~~~~~~~~~~~~~w~~~~~Es~~~~~~R~~~~l~~l~-~~~~~~vlvVsH 206 (264)
..++.+.+|+.++-.+- |..+.|.|.-|.+++..++.+.++.|. +.+-+-|+|-|.
T Consensus 14 ~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~d~ivIaCN 70 (251)
T TIGR00067 14 LKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNIKLLVVACN 70 (251)
T ss_pred HHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 46677888876654443 445566667799999999999999998 555555665554
No 72
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.27 E-value=1.4e+02 Score=23.78 Aligned_cols=29 Identities=14% Similarity=0.031 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
+...++.+.+..+.+..+..+++|||..-
T Consensus 134 ~~~~~l~~~l~~~~~~~~~tiii~sH~~~ 162 (178)
T cd03229 134 ITRREVRALLKSLQAQLGITVVLVTHDLD 162 (178)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 44556667777765544678999999864
No 73
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=21.65 E-value=1.3e+02 Score=25.72 Aligned_cols=30 Identities=23% Similarity=0.195 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFL 210 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i 210 (264)
.....+...+..+.+..+..|++|||..-.
T Consensus 149 ~~~~~l~~~l~~~~~~~~~tiiivsHd~~~ 178 (246)
T cd03237 149 EQRLMASKVIRRFAENNEKTAFVVEHDIIM 178 (246)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 345566667777665556889999999653
No 74
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.45 E-value=1.9e+02 Score=24.06 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEeCHHHHHHHHH
Q 043114 180 EEVAKRGMKFVNWLWTRKEKEIAVVTHSGFLYHTLS 215 (264)
Q Consensus 180 ~~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~~ll~ 215 (264)
-.+..|+...+..+...-+=.++||||...+..++.
T Consensus 184 VSVQARLLDllrgLv~~l~la~viVTHDl~VarLla 219 (258)
T COG4107 184 VSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLA 219 (258)
T ss_pred hhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhh
Confidence 457789999988887666677999999987766664
No 75
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=21.27 E-value=1.7e+02 Score=23.74 Aligned_cols=30 Identities=20% Similarity=0.138 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFL 210 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i 210 (264)
+....+...+..+.+..+..+++|||-.-.
T Consensus 105 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~ 134 (177)
T cd03222 105 EQRLNAARAIRRLSEEGKKTALVVEHDLAV 134 (177)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCHHH
Confidence 344555666666654444789999998743
No 76
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=21.13 E-value=1.2e+02 Score=26.27 Aligned_cols=26 Identities=23% Similarity=0.142 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 183 AKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 183 ~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
...+.++++.+.+. +..||+|||.--
T Consensus 175 ~~~i~~lL~~l~~e-g~tIl~vtHDL~ 200 (254)
T COG1121 175 QKEIYDLLKELRQE-GKTVLMVTHDLG 200 (254)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEeCCcH
Confidence 34555667777666 889999999853
No 77
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.10 E-value=1.4e+02 Score=24.63 Aligned_cols=29 Identities=17% Similarity=0.134 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
.....+.+++..+.+..+..|+++||-.-
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~ 193 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID 193 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 44455666666665445678999999874
No 78
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=20.87 E-value=1.3e+02 Score=25.81 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGFLY 211 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~i~ 211 (264)
.-...+.+.+.++....+.++++|||..-.-
T Consensus 172 ~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~ 202 (235)
T COG1122 172 KGRRELLELLKKLKEEGGKTIIIVTHDLELV 202 (235)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCcHHHH
Confidence 3445555666666656678999999987443
No 79
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=20.72 E-value=1.6e+02 Score=24.77 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
+..+.+..++..+.+..+..|++|||..-
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~ 215 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMK 215 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHH
Confidence 45566666777665555678999999975
No 80
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=20.11 E-value=1.5e+02 Score=24.33 Aligned_cols=29 Identities=24% Similarity=0.035 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
+....+.+.+..+.+..+..|++|||..-
T Consensus 175 ~~~~~l~~~l~~~~~~~~~tii~~tH~~~ 203 (221)
T TIGR02211 175 NNAKIIFDLMLELNRELNTSFLVVTHDLE 203 (221)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 34455556666665444678999999864
No 81
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.05 E-value=1.5e+02 Score=24.22 Aligned_cols=29 Identities=14% Similarity=-0.056 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEeCHHH
Q 043114 181 EVAKRGMKFVNWLWTRKEKEIAVVTHSGF 209 (264)
Q Consensus 181 ~~~~R~~~~l~~l~~~~~~~vlvVsHg~~ 209 (264)
+...++.+.+..+.+..+..|+++||-.-
T Consensus 164 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~ 192 (213)
T cd03259 164 KLREELREELKELQRELGITTIYVTHDQE 192 (213)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 44556666666665444678999999864
Done!