BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043117
AYLEHLKEELKTVEAESSKISNEIETLTRTQVEDSNRLESDLEELNCALDLIASEGSQNA
KEDRQVFCPARAEDQVCPPHTEDQSDLIKIHEDHRFEILELESQIEKNKIILNSLQDLDF
VLKRFDAVEQIEDTLTGLKVIDFDGKCFRLSMQTYIPTLEESSFQHKIEDVIEPSEVNHE
LLIEVIDGTMEIKNVEMFPNDVHISDLVDAAKSFRQSGTQLDSLETSSSLQWFIRNVQDR
IILSTLRRFVVKTANKSRHLFEYFEGDEMIVAHLVGGVDAFIKPSQGWPLSNSPLKLISL
KSSDHHSKGISLSFFCRVEEAANSLDVHIRQNLSSFVDGVEKILLEQMRVELHYDNASG

High Scoring Gene Products

Symbol, full name Information P value
AT3G23910 protein from Arabidopsis thaliana 5.7e-91
AT3G24255 protein from Arabidopsis thaliana 2.9e-87

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043117
        (359 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2076076 - symbol:AT3G23910 "AT3G23910" species...   907  5.7e-91   1
TAIR|locus:2829273 - symbol:AT3G24255 "AT3G24255" species...   872  2.9e-87   1


>TAIR|locus:2076076 [details] [associations]
            symbol:AT3G23910 "AT3G23910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006979 "response to oxidative stress"
            evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006979
            EMBL:AP001297 UniGene:At.5358 UniGene:At.66479 EMBL:AY091054
            EMBL:AY117360 EMBL:Y09562 IPI:IPI00522147 RefSeq:NP_189033.1
            IntAct:P92952 PaxDb:P92952 PRIDE:P92952 EnsemblPlants:AT3G23910.1
            GeneID:821974 KEGG:ath:AT3G23910 TAIR:At3g23910 eggNOG:NOG276711
            HOGENOM:HOG000240741 InParanoid:P92952 OMA:FLCKVEE PhylomeDB:P92952
            ProtClustDB:CLSN2684346 ArrayExpress:P92952 Genevestigator:P92952
            Uniprot:P92952
        Length = 421

 Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
 Identities = 181/358 (50%), Positives = 258/358 (72%)

Query:     1 AYLEHLKEELKTVEAESSKISNEIETLTRTQVEDSNRLESDLEELNCALDLIASEGSQNA 60
             AYLE+L+ EL++VEAES+K+S EIE L+++  +DS+RL+ DLE L  +LD ++S+  + +
Sbjct:    77 AYLEYLRNELQSVEAESAKVSEEIERLSQSHAQDSSRLQRDLEGLLLSLDSMSSQDVEKS 136

Query:    61 KEDRQVFCPARAEDQVCPPHTEDQSDLIKIHEDHRFEILELESQIEKNKIILNSLQDLDF 120
             KE++    P+ +  +VC           ++ +D +F++ ELE+Q+E+ ++IL SL+DLD 
Sbjct:   137 KENQ----PSSSSMEVC-----------EVIDDDKFKMFELENQMEEKRMILKSLEDLDS 181

Query:   121 VLKRFDAVEQIEDTLTGLKVIDFDGKCFRLSMQTYIPTLEESSFQHKIEDVIEPSEVNHE 180
             + KRFDA EQ+ED LTGLKV++FDG   RL ++TYI  L+    QHK + + EPSE+ HE
Sbjct:   182 LRKRFDAAEQVEDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHE 241

Query:   181 LLIEVIDGTMEIKNVEMFPNDVHISDLVDAAKSFRQSGTQLDSLETSSSLQWFIRNVQDR 240
             LLI + D T EI   EMFPND++I D+++AA SFRQ       L+T SS+QW +  VQD+
Sbjct:   242 LLIYLKDKTTEITKFEMFPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDK 301

Query:   241 IILSTLRRFVVKTANKSRHLFEYFEGDEMIVAHLVGGVDAFIKPSQGWPLSNSPLKLISL 300
             II +TLR+++V ++   R+ FEY++ DE IVAH+ GG+DAF+K S GWPL N+PLKL SL
Sbjct:   302 IISTTLRKYIVMSSKTIRYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASL 361

Query:   301 KSSDHHSKGISLSFFCRVEEAANSLDVHIRQNLSSFVDGVEKILLEQMRVELHYDNAS 358
             K+SD+ SKGISLS  C+VEE ANSLD+  RQNLS F+D +EKIL+EQ R EL  + +S
Sbjct:   362 KNSDNQSKGISLSLICKVEELANSLDLETRQNLSGFMDAIEKILVEQTREELQSNKSS 419


>TAIR|locus:2829273 [details] [associations]
            symbol:AT3G24255 "AT3G24255" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GO:GO:0003964 InterPro:IPR026960
            Pfam:PF13966 IPI:IPI00538990 RefSeq:NP_189068.2 UniGene:At.5358
            UniGene:At.66479 PRIDE:F4J6J5 EnsemblPlants:AT3G24255.1
            GeneID:822013 KEGG:ath:AT3G24255 PhylomeDB:F4J6J5 Uniprot:F4J6J5
        Length = 746

 Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
 Identities = 178/358 (49%), Positives = 253/358 (70%)

Query:     1 AYLEHLKEELKTVEAESSKISNEIETLTRTQVEDSNRLESDLEELNCALDLIASEGSQNA 60
             AYLE+L+ EL++VEAES+K+S EIE L+++   DS+RL+ DLE L  +LD ++S+  + +
Sbjct:   402 AYLEYLRNELQSVEAESAKVSEEIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEKS 461

Query:    61 KEDRQVFCPARAEDQVCPPHTEDQSDLIKIHEDHRFEILELESQIEKNKIILNSLQDLDF 120
             KE++    P+ +  +VC           ++ +D +F++ ELE+Q+E+ ++IL SL+DLD 
Sbjct:   462 KENQ----PSSSSMEVC-----------EVIDDDKFKMFELENQMEEKRMILKSLEDLDS 506

Query:   121 VLKRFDAVEQIEDTLTGLKVIDFDGKCFRLSMQTYIPTLEESSFQHKIEDVIEPSEVNHE 180
             + KRFDA EQ+ED LTGLKV++FDG   RL ++TYI  L+    QHK + + EPSE+ HE
Sbjct:   507 LRKRFDAAEQVEDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHE 566

Query:   181 LLIEVIDGTMEIKNVEMFPNDVHISDLVDAAKSFRQSGTQLDSLETSSSLQWFIRNVQDR 240
             LLI + D T EI   EMFPND++I D+++AA SFRQ       L+T SS+QW +  VQD+
Sbjct:   567 LLIYLKDKTTEITKFEMFPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDK 626

Query:   241 IILSTLRRFVVKTANKSRHLFEYFEGDEMIVAHLVGGVDAFIKPSQGWPLSNSPLKLISL 300
             II +TLR+  V ++   R+ FEY++ DE IVAH+ GG+DAF+K S GWPL N+PLKL SL
Sbjct:   627 IISTTLRKDFVMSSKTIRYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASL 686

Query:   301 KSSDHHSKGISLSFFCRVEEAANSLDVHIRQNLSSFVDGVEKILLEQMRVELHYDNAS 358
             K+SD+ SKG SLS   ++EE ANSLD+  RQNLS F+D VEKIL++Q R EL  + +S
Sbjct:   687 KNSDNQSKGFSLSLISKLEELANSLDLETRQNLSGFMDAVEKILVQQTREELKSNESS 744


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      359       359   0.00081  117 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  217 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.34u 0.11s 38.45t   Elapsed:  00:00:02
  Total cpu time:  38.34u 0.11s 38.45t   Elapsed:  00:00:02
  Start:  Mon May 20 15:21:08 2013   End:  Mon May 20 15:21:10 2013

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