BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043119
(792 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225460933|ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
Length = 807
Score = 1405 bits (3637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/796 (84%), Positives = 736/796 (92%), Gaps = 7/796 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACILHGHRVG+SYYDSSIRQLHVLEVWED +SDFPLID+VKYQA+P IIYTSTK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
+SFLSAL+RSDGTTEAPTVKL+KSSIFSYEQAWHRLIYLRVTGMDDGL+IKERIC+L+SM
Sbjct: 72 DSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHRLIYLRVTGMDDGLNIKERICFLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GS++QVRASGGLLA+LENERIVDTLEQKE GNASITID V E+SL+KFLKLDA AHE
Sbjct: 132 MDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLDAAAHE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN
Sbjct: 192 ALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AISFFLCSEEL SL ETLK VKDIP+ILKKFNSPS I T++DW +FLKS+CSLLHVNKI
Sbjct: 252 AISFFLCSEELTVSLRETLKSVKDIPYILKKFNSPSSICTSTDWASFLKSVCSLLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISESL+EQ++ LN DIVEKA SCITTELAYVYELVIG+IDVNRSKEKGYGTLV+EG
Sbjct: 312 FEVGISESLQEQVKYLNLDIVEKAHSCITTELAYVYELVIGVIDVNRSKEKGYGTLVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FCDELDELRQIYEELPEFLEEV+SLEL +LPH C VPCIVYIHQIGYLMCIFE+KLD
Sbjct: 372 FCDELDELRQIYEELPEFLEEVSSLELARLPHFCGGKLVPCIVYIHQIGYLMCIFEDKLD 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
+TTLE+LQ FEFAFSD DG+TK+ FY T KTRELDNLLGDIYHKILDMERAITRDLVSHI
Sbjct: 432 ETTLEKLQDFEFAFSDGDGDTKKFFYRTSKTRELDNLLGDIYHKILDMERAITRDLVSHI 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
LFS HLLKAV+FAAELDCFLSL+L+AHQNNY+RP+L+ + LLDI+NGRHVLQEMTVDTF
Sbjct: 492 LLFSMHLLKAVSFAAELDCFLSLSLIAHQNNYVRPVLSADSLLDIRNGRHVLQEMTVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT+I +DGRINIITGPNYSGKS+YIKQVALIVFLSHIGSFVPADAATVGLTD
Sbjct: 552 IPNDTKILDDGRINIITGPNYSGKSVYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MTAEQS+FMIDLHQVGMMLR A S+SLCLLDEFGKGTLTEDGIGLLGGTIN+FV
Sbjct: 612 MGSKPMTAEQSTFMIDLHQVGMMLRHANSRSLCLLDEFGKGTLTEDGIGLLGGTINHFVA 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
D PPKVLVCTHLTE+ NE CLPKSE+++FYTMSVLRP+NN TD+EDIVFLYRLVPGHAL
Sbjct: 672 SDDPPKVLVCTHLTEMFNESCLPKSEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHAL 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LSYGLHCALLAGVP +VIKRAA +L+A NNKHVER +E ISAQDQ YK+AV+KMLAFD
Sbjct: 732 LSYGLHCALLAGVPEDVIKRAACILDAIGNNKHVERLCNERISAQDQLYKDAVDKMLAFD 791
Query: 775 VLKGDLRLFFQDLLPS 790
+LKGDL LFFQD+ PS
Sbjct: 792 ILKGDLNLFFQDIFPS 807
>gi|297737456|emb|CBI26657.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/793 (84%), Positives = 733/793 (92%), Gaps = 7/793 (0%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
MACILHGHRVG+SYYDSSIRQLHVLEVWED +SDFPLID+VKYQA+P IIYTSTK E+SF
Sbjct: 1 MACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCEDSF 60
Query: 65 LSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDM 124
LSAL+RSDGTTEAPTVKL+KSSIFSYEQAWHRLIYLRVTGMDDGL+IKERIC+L+SMMD+
Sbjct: 61 LSALQRSDGTTEAPTVKLMKSSIFSYEQAWHRLIYLRVTGMDDGLNIKERICFLSSMMDI 120
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
GS++QVRASGGLLA+LENERIVDTLEQKE GNASITID V E+SL+KFLKLDA AHEALQ
Sbjct: 121 GSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLDAAAHEALQ 180
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
IFQ DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS
Sbjct: 181 IFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 240
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
FFLCSEEL SL ETLK VKDIP+ILKKFNSPS I T++DW +FLKS+CSLLHVNKIFEV
Sbjct: 241 FFLCSEELTVSLRETLKSVKDIPYILKKFNSPSSICTSTDWASFLKSVCSLLHVNKIFEV 300
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
GISESL+EQ++ LN DIVEKA SCITTELAYVYELVIG+IDVNRSKEKGYGTLV+EGFCD
Sbjct: 301 GISESLQEQVKYLNLDIVEKAHSCITTELAYVYELVIGVIDVNRSKEKGYGTLVKEGFCD 360
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELDELRQIYEELPEFLEEV+SLEL +LPH C VPCIVYIHQIGYLMCIFE+KLD+TT
Sbjct: 361 ELDELRQIYEELPEFLEEVSSLELARLPHFCGGKLVPCIVYIHQIGYLMCIFEDKLDETT 420
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
LE+LQ FEFAFSD DG+TK+ FY T KTRELDNLLGDIYHKILDMERAITRDLVSHI LF
Sbjct: 421 LEKLQDFEFAFSDGDGDTKKFFYRTSKTRELDNLLGDIYHKILDMERAITRDLVSHILLF 480
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPN 544
S HLLKAV+FAAELDCFLSL+L+AHQNNY+RP+L+ + LLDI+NGRHVLQEMTVDTFIPN
Sbjct: 481 SMHLLKAVSFAAELDCFLSLSLIAHQNNYVRPVLSADSLLDIRNGRHVLQEMTVDTFIPN 540
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------S 597
DT+I +DGRINIITGPNYSGKS+YIKQVALIVFLSHIGSFVPADAATVGLTD S
Sbjct: 541 DTKILDDGRINIITGPNYSGKSVYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGS 600
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
K MTAEQS+FMIDLHQVGMMLR A S+SLCLLDEFGKGTLTEDGIGLLGGTIN+FV D
Sbjct: 601 KPMTAEQSTFMIDLHQVGMMLRHANSRSLCLLDEFGKGTLTEDGIGLLGGTINHFVASDD 660
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
PPKVLVCTHLTE+ NE CLPKSE+++FYTMSVLRP+NN TD+EDIVFLYRLVPGHALLSY
Sbjct: 661 PPKVLVCTHLTEMFNESCLPKSEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSY 720
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLK 777
GLHCALLAGVP +VIKRAA +L+A NNKHVER +E ISAQDQ YK+AV+KMLAFD+LK
Sbjct: 721 GLHCALLAGVPEDVIKRAACILDAIGNNKHVERLCNERISAQDQLYKDAVDKMLAFDILK 780
Query: 778 GDLRLFFQDLLPS 790
GDL LFFQD+ PS
Sbjct: 781 GDLNLFFQDIFPS 793
>gi|449463733|ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
Length = 807
Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/796 (79%), Positives = 713/796 (89%), Gaps = 7/796 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
Q+YMAC+ HG +VGVSYYDSSIRQLHVLEVWED + ++PLID+VKYQA+P +IYTSTKSE
Sbjct: 12 QIYMACVKHGQKVGVSYYDSSIRQLHVLEVWEDGSIEYPLIDLVKYQAKPLMIYTSTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESFL+AL+RSDG +EAPTVKLVKSSIFSYEQAWHRL+YLRVTGMDDGL+IKERICYL+SM
Sbjct: 72 ESFLAALQRSDGMSEAPTVKLVKSSIFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+ SEVQVRASGGLLA+LE+ERIVDTLEQKE G +SITIDSVIE+SLN FLKLDATA E
Sbjct: 132 MDVESEVQVRASGGLLAILESERIVDTLEQKELGTSSITIDSVIEISLNNFLKLDATALE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP+LDLENLN RLN
Sbjct: 192 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPLLDLENLNKRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AISFF+ S+ELM SL ETLK VKDIPHILKKFNSPS Y++ DWTAFLKSICSLLHVNKI
Sbjct: 252 AISFFISSDELMHSLRETLKIVKDIPHILKKFNSPSSTYSSGDWTAFLKSICSLLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVG+SE+L+E ++ N DIVEKA +CITTELAYVYELVIG++DV+RSKEK Y T+V+EG
Sbjct: 312 FEVGMSENLKENMKYFNLDIVEKANTCITTELAYVYELVIGVLDVSRSKEKSYETIVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FC+ELDELR++YEELPEFLEEV+S+EL Q P LCK PCIVYIHQIGYL+CIFEEKLD
Sbjct: 372 FCEELDELREVYEELPEFLEEVSSMELAQFPQLCKYTIAPCIVYIHQIGYLLCIFEEKLD 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
++TLE LQ FEFAFSD+DG+ KR FYH+PKTRELDNLLGDIYHKILDMERAI RDLVSHI
Sbjct: 432 ESTLEILQDFEFAFSDVDGDIKRFFYHSPKTRELDNLLGDIYHKILDMERAIIRDLVSHI 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
+FS HL KAV+FAAELDCFLSLAL+A QNNY+RP LT + +LDI+NGRHVLQEM VDTF
Sbjct: 492 LVFSLHLHKAVDFAAELDCFLSLALIARQNNYVRPDLTADSMLDIKNGRHVLQEMAVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT+I DGR+NIITGPNYSGKSIY+KQVALIVFLSHIGSFVPA+AATVGLTD
Sbjct: 552 IPNDTKIFYDGRVNIITGPNYSGKSIYVKQVALIVFLSHIGSFVPAEAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SKHMTAEQS+FMIDL QVGMMLRQAT +SLCL+DEFGKGTLTEDGIGLLGGTI +F +
Sbjct: 612 MGSKHMTAEQSTFMIDLLQVGMMLRQATCRSLCLIDEFGKGTLTEDGIGLLGGTITHFAS 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
+ PKVLVCTHLTEL+NE LP ER+KFY M+V+RP+N+ T+ EDIVFLYRLVPGHAL
Sbjct: 672 SNDSPKVLVCTHLTELINESFLPMCERIKFYNMTVIRPDNDCTENEDIVFLYRLVPGHAL 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
SYGLHCALLAGVP EVIKRAA+VL+A +N+KHVER +EN+SAQD+ Y++AV+K+L D
Sbjct: 732 PSYGLHCALLAGVPDEVIKRAAFVLDAMENHKHVERLHNENLSAQDKLYQDAVDKLLRLD 791
Query: 775 VLKGDLRLFFQDLLPS 790
V K DL FFQD+ S
Sbjct: 792 VNKCDLGRFFQDIFLS 807
>gi|356553565|ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
Length = 882
Score = 1291 bits (3342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/794 (78%), Positives = 701/794 (88%), Gaps = 7/794 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACIL+G+R+GVSYYDS++RQL+VLEVW+D + FP+ID+VKYQA P +IYTSTKSE
Sbjct: 12 QVYMACILNGNRIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTSTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESFLSAL++ DG E+P VKLVKSSIFSYEQAWHRL+YLRV GMDDGL++KERI YL+SM
Sbjct: 72 ESFLSALQQRDGAAESPIVKLVKSSIFSYEQAWHRLVYLRVAGMDDGLNVKERIYYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
M+MGSEVQVRASGGLLA+LENERIVDTLEQKESGN SITIDS+ E+SLN FLKLD AHE
Sbjct: 132 MNMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFLKLDTAAHE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE LN RLN
Sbjct: 192 ALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
+ISFFLCSEEL+ SL ETLK VKDIP +LKKF+SPS I T+ DWTA LKSIC++LHVNKI
Sbjct: 252 SISFFLCSEELVTSLRETLKSVKDIPLLLKKFDSPSSICTSFDWTALLKSICAMLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISE LRE+L+ LN DIVEKA+S IT EL YVYELVIG+IDVNR+KEKGY T+V+EG
Sbjct: 312 FEVGISEGLREELKYLNLDIVEKASSHITAELGYVYELVIGVIDVNRTKEKGYATVVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FCDELDELRQIYEELPEFLEEV+SLEL QLP LCK+ +PCIVYI QIGYLMCIF EK +
Sbjct: 372 FCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKRIPCIVYIQQIGYLMCIFGEKPE 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
+TTLEQL +E+ F D DGETK+ FY TPKTRELD+LLGDI+HKILDMERAITRDL S I
Sbjct: 432 ETTLEQLVDWEYTFCDTDGETKKYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRI 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
LF HL+K FAAELDCFLS+ALVA QNNY+RP LT E LLDI+NGRHVLQEMTVDTF
Sbjct: 492 LLFQTHLIKVATFAAELDCFLSMALVARQNNYVRPSLTEENLLDIKNGRHVLQEMTVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT+I +DGRINIITGPN+SGKSIY+KQVA+IVFLSHIGSFVPADAATVGLTD
Sbjct: 552 IPNDTKILHDGRINIITGPNFSGKSIYLKQVAIIVFLSHIGSFVPADAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
S+ MTAEQS+FMIDLHQ+GMMLR ATS+SLCL+DEFGKGTLTEDGIGLL GTIN+FVT
Sbjct: 612 TGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGTINHFVT 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
D PPKV VCTHL +LL+ L KSE++KFYTMS+LRP+ NST +EDIVFLYRLVPGHA
Sbjct: 672 TDEPPKVFVCTHLMDLLHGHSLTKSEQIKFYTMSILRPDGNSTHIEDIVFLYRLVPGHAH 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
SYGLHCALLAGVP E+IKRA VL+ NNKHVER S+ENISAQD+QYK+A+EK+L FD
Sbjct: 732 HSYGLHCALLAGVPEEIIKRATAVLDTVSNNKHVERLSNENISAQDRQYKDAMEKLLEFD 791
Query: 775 VLKGDLRLFFQDLL 788
+ KGDL++FF+D+
Sbjct: 792 IDKGDLKIFFEDVF 805
>gi|297830728|ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
lyrata]
gi|297329086|gb|EFH59505.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
lyrata]
Length = 807
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/796 (77%), Positives = 698/796 (87%), Gaps = 7/796 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACI HG RVGVSYYD S+RQLHVLEVWE+ SDF LI++VKYQA+P IIYTSTKSE
Sbjct: 12 QVYMACIQHGRRVGVSYYDCSVRQLHVLEVWEEDCSDFTLINMVKYQAKPSIIYTSTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESF++AL+++DGT E VKLVKSS FSYEQAWHRL+YLRVTGMDDGL+IKERICYL+SM
Sbjct: 72 ESFVAALQQNDGTDETTMVKLVKSSTFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GSEVQVR SGGLLA+LE+ERIV+TLEQ ESG+ASI IDSV+EV LNKFLKLDA AHE
Sbjct: 132 MDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMEVPLNKFLKLDAAAHE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC TPMGRRLLR+WF+RPILDLE L+ RLN
Sbjct: 192 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AISFF+ S ELMASL ETLK VKDI H+LKKFNSP+ + T++DWTAFLKSI +LLHVNKI
Sbjct: 252 AISFFISSVELMASLRETLKSVKDISHLLKKFNSPTSLCTSNDWTAFLKSISALLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVG+SESLRE +R N DI+EKA CI+TEL YVYELVIG+IDV RSKE+GY TLV+EG
Sbjct: 312 FEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FC ELDELRQIYEELPEFL+EV+++EL PHL KE PCIVYI QIGYLMCIF EKLD
Sbjct: 372 FCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLD 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
+TTL +L FEFAFSDMDGET+R FYHTPKTRELDNLLGDIYHKILDMERAI RDL+SH
Sbjct: 432 ETTLNRLTEFEFAFSDMDGETQRFFYHTPKTRELDNLLGDIYHKILDMERAIIRDLLSHT 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
LFS HLLKAVNF AELDC LSLA VAHQNNY+RP+LT+E LLDI+NGRHVLQEM VDTF
Sbjct: 492 LLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTIESLLDIRNGRHVLQEMAVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT I+++GRI+IITGPNYSGKSIY+KQVALIVFLSHIGSFVPADAATVGLTD
Sbjct: 552 IPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MTAEQS+FMIDLHQVGMMLRQATS+SLCLLDEFGKGTLTEDGIGLLGGTI++FVT
Sbjct: 612 MGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFVT 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
C PP+VLVCTHLTELLNE CLP SE++KFYTMSVLRP+ S +E+IVFLYRL+PG L
Sbjct: 672 CTEPPRVLVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESAKMEEIVFLYRLIPGQTL 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LSYG H + GVP EV+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K + FD
Sbjct: 732 LSYGEHLCVCVGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFMEFD 791
Query: 775 VLKGDLRLFFQDLLPS 790
+ KGD+R FFQD+ S
Sbjct: 792 IGKGDIRGFFQDIFTS 807
>gi|186510260|ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
gi|395406789|sp|F4JEP5.1|MSH5_ARATH RecName: Full=DNA mismatch repair protein MSH5; Short=AtMSH5;
AltName: Full=MutS protein homolog 5
gi|332642863|gb|AEE76384.1| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
Length = 807
Score = 1285 bits (3325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/796 (77%), Positives = 696/796 (87%), Gaps = 7/796 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACI HG RVGVSYYD S+RQLHVLE WE+ SDF LI++VKYQA+P IIY STKSE
Sbjct: 12 QVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPSIIYASTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESF++AL+++DGT E VKLVKSS FSYEQAWHRL+YLRVTGMDDGL+IKERICYL+SM
Sbjct: 72 ESFVAALQQNDGTDETTMVKLVKSSTFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GSEVQVR SGGLLA+LE+ERIV+TLEQ ESG+ASI IDSV+EV LNKFLKLDA AHE
Sbjct: 132 MDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMEVPLNKFLKLDAAAHE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC TPMGRRLLR+WF+RPILDLE L+ RLN
Sbjct: 192 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AISFF+ S ELMASL ETLK VKDI H+LKKFNSP+ + T++DWTAFLKSI +LLHVNKI
Sbjct: 252 AISFFISSVELMASLRETLKSVKDISHLLKKFNSPTSLCTSNDWTAFLKSISALLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVG+SESLRE +R N DI+EKA CI+TEL YVYELVIG+IDV RSKE+GY TLV+EG
Sbjct: 312 FEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FC ELDELRQIYEELPEFL+EV+++EL PHL KE PCIVYI QIGYLMCIF EKLD
Sbjct: 372 FCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLD 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
+T L +L FEFAFSDMDGET+R FYHT KTRELDNLLGDIYHKILDMERAI RDL+SH
Sbjct: 432 ETALNRLTEFEFAFSDMDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHT 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
LFS HLLKAVNF AELDC LSLA VAHQNNY+RP+LT+E LLDI+NGRHVLQEM VDTF
Sbjct: 492 LLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTVESLLDIRNGRHVLQEMAVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT I+++GRI+IITGPNYSGKSIY+KQVALIVFLSHIGSFVPADAATVGLTD
Sbjct: 552 IPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MTAEQS+FMIDLHQVGMMLRQATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F T
Sbjct: 612 MGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFAT 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
C PP+V+VCTHLTELLNE CLP SE++KFYTMSVLRP+ S ++E+IVFLYRL+PG L
Sbjct: 672 CAEPPRVVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTL 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LSYGLHCALLAGVP EV+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K D
Sbjct: 732 LSYGLHCALLAGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELD 791
Query: 775 VLKGDLRLFFQDLLPS 790
+ KGD+ FFQD+ S
Sbjct: 792 ISKGDIHAFFQDIFTS 807
>gi|134285215|gb|ABO69626.1| MutS-like protein 5 [Arabidopsis thaliana]
Length = 807
Score = 1282 bits (3318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/796 (77%), Positives = 695/796 (87%), Gaps = 7/796 (0%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACI HG RVGVSYYD S+RQLHVLE WE+ SDF LI++VKYQA+P IIY STKSE
Sbjct: 12 QVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPSIIYASTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESF++AL+++DGT E VKLVKSS FSYEQAWHRL+YLRVTGMDDGL+IKERICYL+SM
Sbjct: 72 ESFIAALQQNDGTDETTMVKLVKSSTFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GSEVQVR SGGLLA+LE+ERIV+TLEQ ESG+ASI IDSV+EV LNKFLKLDA AHE
Sbjct: 132 MDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMEVPLNKFLKLDAAAHE 191
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC TPMGRRLLR+WF+RPILDLE L+ RLN
Sbjct: 192 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLN 251
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AISFF+ S ELMASL ETLK VKDI H+LKKFNSP+ + T++DWTAFLKSI +LLHVNKI
Sbjct: 252 AISFFISSVELMASLRETLKSVKDISHLLKKFNSPTSLCTSNDWTAFLKSISALLHVNKI 311
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVG+SESLRE +R N DI+EKA CI+TEL YVYELVIG+IDV RSKE+GY TLV+EG
Sbjct: 312 FEVGVSESLREHMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEG 371
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FC ELDELRQIYEELPEFL+EV+++EL PHL KE PCIVYI QIGYLMCIF EKLD
Sbjct: 372 FCAELDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLD 431
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
+T L +L FEFAFSDMDGET+R FYHT KTRELDNLLGDIYHKILDMERAI RDL+SH
Sbjct: 432 ETALNRLTEFEFAFSDMDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHT 491
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
LFS HLLKAVNF AELDC LSLA VAHQNNY+RP+LT+E LLDI+NGRHVLQEM VDTF
Sbjct: 492 LLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTVESLLDIRNGRHVLQEMAVDTF 551
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
IPNDT I+++GRI+IITGPNYSGKSIY+KQVALIVFLSHIGSFVPADAATVGLTD
Sbjct: 552 IPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCA 611
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MTAEQS+FMIDLHQVGMMLRQATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F T
Sbjct: 612 MGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFAT 671
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
C PP+V+VCTHLTELLNE CLP SE++KFYTMSVL P+ S ++E+IVFLYRL+PG L
Sbjct: 672 CAEPPRVVVCTHLTELLNESCLPVSEKIKFYTMSVLXPDTESANMEEIVFLYRLIPGQTL 731
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LSYGLHCALLAGVP EV+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K D
Sbjct: 732 LSYGLHCALLAGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELD 791
Query: 775 VLKGDLRLFFQDLLPS 790
+ KGD+ FFQD+ S
Sbjct: 792 ISKGDIHAFFQDIFTS 807
>gi|115464697|ref|NP_001055948.1| Os05g0498300 [Oryza sativa Japonica Group]
gi|48475216|gb|AAT44285.1| unknown protein [Oryza sativa Japonica Group]
gi|113579499|dbj|BAF17862.1| Os05g0498300 [Oryza sativa Japonica Group]
Length = 809
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/796 (68%), Positives = 656/796 (82%), Gaps = 10/796 (1%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV+MAC++ G RVG++YYDSS+ QL VLE+WED DFPLID+VKYQ++P IYTSTK++
Sbjct: 17 QVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDLVKYQSKPSTIYTSTKTD 76
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
E+ L AL+R+D EAP VKL+KSS FSYEQAWHRL+YL+V MD+GLS+KERIC+LNSM
Sbjct: 77 EALLLALQRNDCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAMDEGLSVKERICFLNSM 136
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GS+VQVRA+GGLLA+L+NER++DTL+Q E G ASI IDSV ++SL+KFLKLDATAHE
Sbjct: 137 MDLGSDVQVRAAGGLLAILDNERLLDTLDQME-GGASIAIDSVAQISLDKFLKLDATAHE 195
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPS+MGIGRAKEGFSVFGM+NKCVTPMG+ LLR WFLRPI+D++ +N+RLN
Sbjct: 196 ALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKHLLRTWFLRPIIDIDVINNRLN 255
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
ISFFLC E++M++L TLK V+DIPH+LKKFNSPS T+SDW AFLK ICSLLH+NKI
Sbjct: 256 TISFFLCCEDVMSALRGTLKSVRDIPHMLKKFNSPSSFCTSSDWHAFLKCICSLLHINKI 315
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISE L +L+ +N D+V KA S IT EL YV +LV+G+IDV R KEKGY TLV++G
Sbjct: 316 FEVGISEHLAIKLQHMNIDLVGKANSSITEELDYVSDLVVGVIDVQRGKEKGYDTLVKDG 375
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
C+ELDELR +YEELP+FLE+V++ E+ P + P IVY+HQIGYLMC F+EK+
Sbjct: 376 LCEELDELRMVYEELPDFLEQVSANEIASFPFSFECRKAPLIVYVHQIGYLMCFFDEKIS 435
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
D L L FEFAFS+ +GE +R +YHT KTRELDNLLGDIYHKILDMERAI RDLV +
Sbjct: 436 DALLIGLPDFEFAFSE-EGEERRFYYHTQKTRELDNLLGDIYHKILDMERAIIRDLVCRV 494
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
C F L KAVNFAAELDC LSLA+VA QNNY+RPILT + +L+IQNGRH LQEMTVDTF
Sbjct: 495 CQFIPQLTKAVNFAAELDCILSLAIVARQNNYVRPILTEDSILEIQNGRHALQEMTVDTF 554
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
+PNDT+I + GRINIITGPNYSGKSIYIKQVAL+VFL+HIGSFVPAD+A VGLTD
Sbjct: 555 VPNDTKIRSSGRINIITGPNYSGKSIYIKQVALVVFLAHIGSFVPADSAIVGLTDRIFCA 614
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MT+EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F
Sbjct: 615 MGSKSMTSEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFTD 674
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
D PPKVL+ THLT++ E LP+SE +K YTMSVL P+ TD ED++FLYRLVPG AL
Sbjct: 675 YDCPPKVLLSTHLTQIFTESYLPQSEHIKCYTMSVLNPDEQ-TDNEDVIFLYRLVPGQAL 733
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LS+GLHCA LAGVP+EV++RA VL + + + R E ++A+DQQY++AV K+LAFD
Sbjct: 734 LSFGLHCAQLAGVPSEVVQRAVTVLGDIHSKRPIRRMVWEKLAAKDQQYQDAVTKLLAFD 793
Query: 775 VLKGDLRLFFQDLLPS 790
KGDL FFQ++ PS
Sbjct: 794 PHKGDLVNFFQEVFPS 809
>gi|222632106|gb|EEE64238.1| hypothetical protein OsJ_19071 [Oryza sativa Japonica Group]
Length = 1046
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/796 (68%), Positives = 656/796 (82%), Gaps = 10/796 (1%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV+MAC++ G RVG++YYDSS+ QL VLE+WED DFPLID+VKYQ++P IYTSTK++
Sbjct: 254 QVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDLVKYQSKPSTIYTSTKTD 313
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
E+ L AL+R+D EAP VKL+KSS FSYEQAWHRL+YL+V MD+GLS+KERIC+LNSM
Sbjct: 314 EALLLALQRNDCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAMDEGLSVKERICFLNSM 373
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GS+VQVRA+GGLLA+L+NER++DTL+Q E G ASI IDSV ++SL+KFLKLDATAHE
Sbjct: 374 MDLGSDVQVRAAGGLLAILDNERLLDTLDQME-GGASIAIDSVAQISLDKFLKLDATAHE 432
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPS+MGIGRAKEGFSVFGM+NKCVTPMG+ LLR WFLRPI+D++ +N+RLN
Sbjct: 433 ALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKHLLRTWFLRPIIDIDVINNRLN 492
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
ISFFLC E++M++L TLK V+DIPH+LKKFNSPS T+SDW AFLK ICSLLH+NKI
Sbjct: 493 TISFFLCCEDVMSALRGTLKSVRDIPHMLKKFNSPSSFCTSSDWHAFLKCICSLLHINKI 552
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISE L +L+ +N D+V KA S IT EL YV +LV+G+IDV R KEKGY TLV++G
Sbjct: 553 FEVGISEHLAIKLQHMNIDLVGKANSSITEELDYVSDLVVGVIDVQRGKEKGYDTLVKDG 612
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
C+ELDELR +YEELP+FLE+V++ E+ P + P IVY+HQIGYLMC F+EK+
Sbjct: 613 LCEELDELRMVYEELPDFLEQVSANEIASFPFSFECRKAPLIVYVHQIGYLMCFFDEKIS 672
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
D L L FEFAFS+ +GE +R +YHT KTRELDNLLGDIYHKILDMERAI RDLV +
Sbjct: 673 DALLIGLPDFEFAFSE-EGEERRFYYHTQKTRELDNLLGDIYHKILDMERAIIRDLVCRV 731
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
C F L KAVNFAAELDC LSLA+VA QNNY+RPILT + +L+IQNGRH LQEMTVDTF
Sbjct: 732 CQFIPQLTKAVNFAAELDCILSLAIVARQNNYVRPILTEDSILEIQNGRHALQEMTVDTF 791
Query: 542 IPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
+PNDT+I + GRINIITGPNYSGKSIYIKQVAL+VFL+HIGSFVPAD+A VGLTD
Sbjct: 792 VPNDTKIRSSGRINIITGPNYSGKSIYIKQVALVVFLAHIGSFVPADSAIVGLTDRIFCA 851
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
SK MT+EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F
Sbjct: 852 MGSKSMTSEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFTD 911
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
D PPKVL+ THLT++ E LP+SE +K YTMSVL P+ TD ED++FLYRLVPG AL
Sbjct: 912 YDCPPKVLLSTHLTQIFTESYLPQSEHIKCYTMSVLNPDEQ-TDNEDVIFLYRLVPGQAL 970
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFD 774
LS+GLHCA LAGVP+EV++RA VL + + + R E ++A+DQQY++AV K+LAFD
Sbjct: 971 LSFGLHCAQLAGVPSEVVQRAVTVLGDIHSKRPIRRMVWEKLAAKDQQYQDAVTKLLAFD 1030
Query: 775 VLKGDLRLFFQDLLPS 790
KGDL FFQ++ PS
Sbjct: 1031 PHKGDLVNFFQEVFPS 1046
>gi|400202055|gb|AFP73611.1| mutS-like protein 5 [Hordeum vulgare subsp. vulgare]
Length = 792
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/794 (68%), Positives = 646/794 (81%), Gaps = 10/794 (1%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
MAC++ G RVGVSYYDS RQL VLE+WEDS FPLID+VK QA+P IY STK+EE
Sbjct: 1 MACVMQGRRVGVSYYDSDTRQLFVLEIWEDSAGGFPLIDLVKCQAKPSTIYASTKTEEEL 60
Query: 65 LSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDM 124
LSAL+R+D + P VKLVKSS F+YEQAWHRLIYL+V MDDGLS+KERIC+LNSMMD+
Sbjct: 61 LSALQRNDSNDDPPVVKLVKSSTFTYEQAWHRLIYLKVAAMDDGLSVKERICFLNSMMDL 120
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
GS+VQVRA+GGLLA+L+NER++DTLEQ E G ASI IDSV ++SL++FLKLDA AHEALQ
Sbjct: 121 GSDVQVRAAGGLLAILDNERLLDTLEQME-GGASIAIDSVAQISLDRFLKLDAAAHEALQ 179
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
IFQ DKHPS+MGIGRAKEGFSVFG++NKCVTPMGRRLLR WFLRPI+D+E +N+RLN IS
Sbjct: 180 IFQVDKHPSYMGIGRAKEGFSVFGILNKCVTPMGRRLLRAWFLRPIIDIEVINNRLNTIS 239
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
FFLC EE+M++L ETLK V+D+PH+LKKFNSPS T++DW FLK ICSLLH+NKIFEV
Sbjct: 240 FFLCCEEVMSALRETLKSVRDVPHMLKKFNSPSSSCTSNDWHTFLKCICSLLHINKIFEV 299
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
GISE L +L+ ++ D++EKA S IT EL YV LV+G+IDV RSKEKGY TLV+E CD
Sbjct: 300 GISEHLANKLQHMSIDLLEKANSSITAELDYVSNLVVGVIDVQRSKEKGYETLVKENLCD 359
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELDELR +YE LP+FLE+V++ E P + P IVY+HQIGYLMC F+EK+ D
Sbjct: 360 ELDELRMVYEGLPDFLEQVSANENASFPFSLECRKAPLIVYVHQIGYLMCFFDEKISDAL 419
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
L LQ FEFAFS+ DGE +R +YHT KTRELDNLLGDIYHKILDMERAI RDLV + F
Sbjct: 420 LIGLQDFEFAFSE-DGEERRFYYHTQKTRELDNLLGDIYHKILDMERAIIRDLVCRVLQF 478
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPN 544
L KAVNFAAELDC LSLA+VA QNNY+RPILT + +L+IQNGRH LQEMTVDTF+PN
Sbjct: 479 LPQLTKAVNFAAELDCTLSLAIVARQNNYVRPILTEDSILEIQNGRHALQEMTVDTFVPN 538
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------S 597
DTRI + RINI+TGPNYSGKSIYIKQVAL+VFL+HIGSFVPAD+A VGLTD S
Sbjct: 539 DTRIRSAARINIVTGPNYSGKSIYIKQVALVVFLAHIGSFVPADSAVVGLTDRIFCAMGS 598
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
K MT EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F D
Sbjct: 599 KSMTTEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFANYDY 658
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
PPKVL+ THLTE+ E LP+SE +K T SVL P+ +++ EDI+FLYRL+PG ALLS+
Sbjct: 659 PPKVLLSTHLTEIFTENYLPQSEHIKCCTTSVLNPDGQTSN-EDIIFLYRLIPGQALLSF 717
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLK 777
GLHCA LAGVP EVI+RAA VLE + + V R +N++A+D+QY++A+ K+LAFD K
Sbjct: 718 GLHCAQLAGVPGEVIQRAASVLEDIHSKRPVRRMICDNLAAKDKQYEDAMAKLLAFDPRK 777
Query: 778 GDLRLFFQDLLPSK 791
GDL FF+D+ P +
Sbjct: 778 GDLNHFFEDVFPPE 791
>gi|357139550|ref|XP_003571344.1| PREDICTED: mutS protein homolog 5-like [Brachypodium distachyon]
Length = 815
Score = 1120 bits (2898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/799 (68%), Positives = 655/799 (81%), Gaps = 14/799 (1%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV+MAC++ G R+GV+YYDS+ RQL VLE+WEDS FPLID+VK QA+P IY STK+E
Sbjct: 21 QVHMACVMQGRRIGVAYYDSNTRQLFVLEIWEDSAGGFPLIDLVKCQAKPSTIYASTKTE 80
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
E LSAL+++DG EAP VKL+KSS FSYEQAWHRLIYL+V GMDDGLS+KERIC+LNSM
Sbjct: 81 EELLSALQQNDGNGEAPVVKLMKSSTFSYEQAWHRLIYLKVAGMDDGLSVKERICFLNSM 140
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MD+GS+VQVRA+GGLLA+L+NER++DT+EQ E G ASI IDSV ++SL++FLKLDA AHE
Sbjct: 141 MDLGSDVQVRAAGGLLAILDNERLLDTVEQMEGG-ASIEIDSVAQISLDRFLKLDAAAHE 199
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPS+MGIGRAKEGFSVFGM+NKCVTPMGRRLLR WFLRPI+D++ +++RL+
Sbjct: 200 ALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGRRLLRGWFLRPIIDIDVIHNRLD 259
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
ISFFLC EE+M +L ETLK V+DIPH+LKKFNSPS T+SDW LK ICSLLH+NKI
Sbjct: 260 TISFFLCCEEVMTALRETLKSVRDIPHMLKKFNSPSSSCTSSDWHTVLKCICSLLHINKI 319
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISE L +L+ +N D+V+KA S IT EL YV LVIG IDV RSKEKGY T+V+EG
Sbjct: 320 FEVGISEHLANKLQNINIDLVKKANSSITAELDYVSNLVIGAIDVQRSKEKGYDTVVKEG 379
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHL--CKEMFVPCIVYIHQIGYLMCIFEEK 419
CDELDELR +YE LP+FLE+V++ E P C+E P IVYIHQIGYLMC F+EK
Sbjct: 380 LCDELDELRMVYEGLPDFLEQVSANENASFPFALECRE--APLIVYIHQIGYLMCFFDEK 437
Query: 420 LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVS 479
+ D L LQ FEFAFS+ DGE +R +YHT KTRELDNLLGDIYHKILDMERAI RDLV
Sbjct: 438 ISDALLVGLQDFEFAFSE-DGEERRFYYHTQKTRELDNLLGDIYHKILDMERAIIRDLVC 496
Query: 480 HICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD 539
+ F L KAVNFAAELDC LSLA+VA QNNY+RPILT + +L+IQNGRH LQEMTVD
Sbjct: 497 RVLQFLPQLTKAVNFAAELDCILSLAIVARQNNYVRPILTEDSILEIQNGRHALQEMTVD 556
Query: 540 TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
TF+PNDT+I + GRINIITGPNYSGKSIYIKQVAL+VFL+HIGSFVPAD+A VGLTD
Sbjct: 557 TFVPNDTKIRSAGRINIITGPNYSGKSIYIKQVALVVFLAHIGSFVPADSAVVGLTDRIF 616
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
SK MT EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDGIGLLGGTI++F
Sbjct: 617 CAMGSKSMTTEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISHF 676
Query: 653 VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
D PPKVL+ THLTE+ E LP+SE++K YTMSVL P+ +++ EDI+FLYRLVPG
Sbjct: 677 ANYDYPPKVLLSTHLTEIFTENYLPQSEQIKCYTMSVLNPDGQTSN-EDIIFLYRLVPGQ 735
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLA 772
ALLS+GLHCA LAGVP EVI+RAA VLE + + + R + + A+D+QY++A+ K+LA
Sbjct: 736 ALLSFGLHCAQLAGVPDEVIQRAASVLEDIHSKRPIRRMICDKLEARDRQYQDAMTKLLA 795
Query: 773 FDVLKGDLRLFFQDLLPSK 791
FD GDL FF+++ PS+
Sbjct: 796 FDPRIGDLDNFFEEIFPSE 814
>gi|242088367|ref|XP_002440016.1| hypothetical protein SORBIDRAFT_09g024520 [Sorghum bicolor]
gi|241945301|gb|EES18446.1| hypothetical protein SORBIDRAFT_09g024520 [Sorghum bicolor]
Length = 687
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/801 (58%), Positives = 550/801 (68%), Gaps = 127/801 (15%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
MAC++ G RVGV+YYDS RQL VLE+WEDS ++PLID+
Sbjct: 1 MACVMQGRRVGVAYYDSDTRQLFVLEIWEDSVGEYPLIDL-------------------- 40
Query: 65 LSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDM 124
DG EAP VKL+KSS FSYEQAWHRLIYL+V MDDGLS KERIC+LNSMMD+
Sbjct: 41 -------DGNNEAPVVKLMKSSTFSYEQAWHRLIYLKVAAMDDGLSAKERICFLNSMMDL 93
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL------NKFLKLDAT 178
GS+VQVRA+GGLLA+L+NER++DT+EQ + G ASI IDSV+ ++ +KFLKLDAT
Sbjct: 94 GSDVQVRAAGGLLAILDNERLLDTIEQMQGG-ASIAIDSVLALNALTYNHRDKFLKLDAT 152
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
AHEALQIFQ DKHPS+MGIGRAKEGFSVFGM+NKCVTPMG+RLLR WFLRPI+D++ +N+
Sbjct: 153 AHEALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKRLLRAWFLRPIIDIDVINN 212
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
RLN KFNSPS T+SDWT FLK ICSLLH+
Sbjct: 213 RLNT-----------------------------KFNSPSSFCTSSDWTTFLKCICSLLHI 243
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
NKIFEVGISE L +L+ +N D++ KA S IT EL YV +LV+G+IDV R KEKGY T+V
Sbjct: 244 NKIFEVGISEHLAIKLQHMNIDLIGKANSSITAELDYVSDLVVGVIDVQRGKEKGYETVV 303
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
+EG CDELDELR +YE LP+FLE+V+ E LP P +VY+HQIGYLMC F+E
Sbjct: 304 KEGLCDELDELRMVYEGLPDFLEQVSDNENASLPFSFGCRIAPLVVYVHQIGYLMCFFDE 363
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
K+ D L L +EFAFSD +GE +R FYHT KTRELDNLLGDIYHKILDMERAI RDLV
Sbjct: 364 KISDALLAGLPDYEFAFSD-EGEERRFFYHTQKTRELDNLLGDIYHKILDMERAIIRDLV 422
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
+ F L KAVNFAAELDC LSLA+VA QNNY+RPILT + +L+I NGRH LQEMTV
Sbjct: 423 CRVLQFLPQLTKAVNFAAELDCILSLAIVARQNNYVRPILTEDSILEIHNGRHALQEMTV 482
Query: 539 DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
DTF+PND +I + GRINIITGPNYSGKSIYIKQVALIVFL+HIGSFVPAD+A VGLTD
Sbjct: 483 DTFVPNDIKIRDAGRINIITGPNYSGKSIYIKQVALIVFLAHIGSFVPADSAIVGLTDRI 542
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
SK MT EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDGIGLLGGTI++
Sbjct: 543 FCAMGSKSMTTEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGTISH 602
Query: 652 FVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
F D PPKV +
Sbjct: 603 FANYDPPPKVCIV----------------------------------------------- 615
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKML 771
H LL GVP EV++RA VL + K R + E ++A D+QY++AV K++
Sbjct: 616 HGLL---------IGVPNEVVQRADSVLGDIHSKKPARRVTSEKLTATDKQYQDAVTKLM 666
Query: 772 AFDVLKGDLRLFFQDLLPSKL 792
A D K DL FFQ+L PS+L
Sbjct: 667 AIDTQKDDLNSFFQELFPSEL 687
>gi|62320721|dbj|BAD95388.1| DNA mismatch repair protein [Arabidopsis thaliana]
gi|110740262|dbj|BAF02028.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 545
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/545 (75%), Positives = 468/545 (85%), Gaps = 7/545 (1%)
Query: 253 MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE 312
MASL ETLK VKDI H+LKKFNSP+ + T++DWTAFLKSI +LLHVNKIFEVG+SESLRE
Sbjct: 1 MASLRETLKSVKDISHLLKKFNSPTSLCTSNDWTAFLKSISALLHVNKIFEVGVSESLRE 60
Query: 313 QLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+R N DI+EKA CI+TEL YVYELVIG+IDV RSKE+GY TLV+EGFC ELDELRQI
Sbjct: 61 HMRRFNLDIIEKAGLCISTELDYVYELVIGVIDVTRSKERGYQTLVKEGFCAELDELRQI 120
Query: 373 YEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
YEELPEFL+EV+++EL PHL KE PCIVYI QIGYLMCIF EKLD+T L +L FE
Sbjct: 121 YEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLDETALNRLTEFE 180
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
FAFSDMDGET+R FYHT KTRELDNLLGDIYHKILDMERAI RDL+SH LFS HLLKAV
Sbjct: 181 FAFSDMDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAV 240
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDG 552
NF AELDC LSLA VAHQNNY+RP+LT+E LLDI+NGRHVLQEM VDTFIPNDT I+++G
Sbjct: 241 NFVAELDCILSLACVAHQNNYVRPVLTVESLLDIRNGRHVLQEMAVDTFIPNDTEINDNG 300
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------SKHMTAEQS 605
RI+IITGPNYSGKSIY+KQVALIVFLSHIGSFVPADAATVGLTD SK MTAEQS
Sbjct: 301 RIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQS 360
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCT 665
+FMIDLHQVGMMLRQATS+SLCLLDEFGKGTLTED IGLLGGTI++F TC PP+V+VCT
Sbjct: 361 TFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDDIGLLGGTISHFATCAEPPRVVVCT 420
Query: 666 HLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
HLTELLNE CLP SE++KFYTMSVLRP+ S ++E+IVFLYRL+PG LLSYGLHCALLA
Sbjct: 421 HLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLA 480
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQ 785
GVP EV+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K D+ KGD+ FFQ
Sbjct: 481 GVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDISKGDIHAFFQ 540
Query: 786 DLLPS 790
D+ S
Sbjct: 541 DIFTS 545
>gi|224116590|ref|XP_002317341.1| predicted protein [Populus trichocarpa]
gi|222860406|gb|EEE97953.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/583 (71%), Positives = 452/583 (77%), Gaps = 95/583 (16%)
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL------------ 169
MD+GS+VQVRASGGLLA+LE+ERIVDTLEQKE GNASITIDS++E+SL
Sbjct: 1 MDIGSDVQVRASGGLLAILESERIVDTLEQKEYGNASITIDSIVEISLYLFIYKRNLENN 60
Query: 170 --------NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRL 221
NKFLKLDA AHEALQIFQ DKHPSHMGIGRAKEGFSVFGMMNKCVTP+G+ L
Sbjct: 61 LSFTYQIRNKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPIGKHL 120
Query: 222 LRNWFLRPILDLENLNSRLNAI--SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
LRNWFLRP+LD+ENLN RLNAI SFFLCSEELM SL ETLK VKDI IL+KF+SPS +
Sbjct: 121 LRNWFLRPLLDVENLNGRLNAIKISFFLCSEELMVSLRETLKSVKDIKRILRKFDSPSSL 180
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
T DWTAFLKS+C+LLH+ KIFEVGISE+L+E + LN +IVE+A SCITTELAYVYEL
Sbjct: 181 STVGDWTAFLKSVCALLHLGKIFEVGISENLQEHAKYLNLNIVEQACSCITTELAYVYEL 240
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDE------LDELRQIYEELPEFLEEVASLELVQLPH 393
VIG+IDVNRSKEKGYGT+V+EGFCDE LDELRQIYEELP+FL +
Sbjct: 241 VIGVIDVNRSKEKGYGTIVKEGFCDEPFFHMQLDELRQIYEELPDFLHK----------- 289
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
F D+DGETKR FY TPKTR
Sbjct: 290 -----------------------------------------FFDVDGETKRYFYRTPKTR 308
Query: 454 ELDNLLGDIYHKIL--------DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
ELD LLGDIYHKIL DMERAITRDLVSH+ LFSDHLLKA+NFAAELDC LSLA
Sbjct: 309 ELDELLGDIYHKILAVHLLIWKDMERAITRDLVSHVLLFSDHLLKAINFAAELDCILSLA 368
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGK 565
+VAHQNNY+RPILT E LLDIQNGRHVLQEMTVDTFIPNDT+I +D RI IITGPNYSGK
Sbjct: 369 IVAHQNNYVRPILTEENLLDIQNGRHVLQEMTVDTFIPNDTKILHDERIIIITGPNYSGK 428
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD-------SKHMTAEQSSFMIDLHQVGMML 618
SIYIKQVALIVFLSHIGSFVPADAATVGLTD SK MTAEQS+FMIDLHQVG+ML
Sbjct: 429 SIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCATGSKLMTAEQSTFMIDLHQVGLML 488
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
RQ TS+SLCLLDEFGKGTLTEDGIGLLGGT+NYFV CD PPKV
Sbjct: 489 RQTTSRSLCLLDEFGKGTLTEDGIGLLGGTVNYFVACDDPPKV 531
>gi|357494573|ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago truncatula]
gi|355518910|gb|AET00534.1| DNA mismatch repair protein mutS [Medicago truncatula]
Length = 488
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/466 (80%), Positives = 416/466 (89%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACI +GHR+GVSYYDSS+RQL+VLE W+D ++ F +ID+VKYQA P +IYTSTKSE
Sbjct: 14 QVYMACIQNGHRIGVSYYDSSLRQLNVLEAWDDGDNGFSVIDLVKYQANPLVIYTSTKSE 73
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESFL+AL++SD EAPTVKLVKSSIFSYEQAWHRLIYLRV GMDDGL +KERI +L+SM
Sbjct: 74 ESFLAALQQSDEVAEAPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLDVKERIYFLSSM 133
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MDMGSEVQVRASGGLLA+LENERIVDTLEQKESGN SITIDS+ E+SLN F+KLDA +HE
Sbjct: 134 MDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFIKLDAASHE 193
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR WFLRPILDLE LN RLN
Sbjct: 194 ALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRQWFLRPILDLEVLNYRLN 253
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
+ISFF SEEL+ASL ETLK VKDIPH+LKKF+SPS I T++DW A LKSI +LLHVNKI
Sbjct: 254 SISFFHSSEELVASLRETLKSVKDIPHLLKKFDSPSSICTSTDWAALLKSISALLHVNKI 313
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FEVGISE L+E+L+ LN DIVE A+SCITTELAYVYEL+IG+IDVNR+KEKGY T+V+EG
Sbjct: 314 FEVGISEGLQEELKYLNLDIVEMASSCITTELAYVYELIIGVIDVNRTKEKGYPTVVKEG 373
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
FCDELDELRQIYEELPEFLEEV+SLEL QLP LCK VPCIVYI QIGYLMCIFEEKL+
Sbjct: 374 FCDELDELRQIYEELPEFLEEVSSLELAQLPDLCKNKLVPCIVYIQQIGYLMCIFEEKLE 433
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
+ TLE+L +E+ F D DGETKR FY PKTRELDNLLGDIYHKIL
Sbjct: 434 EATLEKLIEWEYTFGDADGETKRYFYRMPKTRELDNLLGDIYHKIL 479
>gi|218197037|gb|EEC79464.1| hypothetical protein OsI_20481 [Oryza sativa Indica Group]
Length = 927
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/528 (66%), Positives = 418/528 (79%), Gaps = 11/528 (2%)
Query: 272 KFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT 331
KFNSPS T+SDW AFLK ICSLLH+NKIFEVGISE L +L+ +N D+V KA S IT
Sbjct: 402 KFNSPSSFCTSSDWHAFLKCICSLLHINKIFEVGISEHLAIKLQHMNIDLVGKANSSITE 461
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
EL YV +LV+G+IDV R KEKGY TLV++G C+ELDELR +YEELP+FLE+V++ E+
Sbjct: 462 ELDYVSDLVVGVIDVQRGKEKGYDTLVKDGLCEELDELRMVYEELPDFLEQVSANEIASF 521
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P + P IVY+HQIGYLMC F+EK+ D L L FEFAFS+ +GE +R +YHT K
Sbjct: 522 PFSFECRKAPLIVYVHQIGYLMCFFDEKISDALLIGLPDFEFAFSE-EGEERRFYYHTQK 580
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
TRELDNLLGDIYHKILDMERAI RDLV +C F L KAVNFAAELDC LSLA+VA QN
Sbjct: 581 TRELDNLLGDIYHKILDMERAIIRDLVCRVCQFIPQLTKAVNFAAELDCILSLAIVARQN 640
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQ 571
NY+RPILT + +L+IQNGRH LQEMTVDTF+PNDT+I + GRINIITGPNYSGKSIYIKQ
Sbjct: 641 NYVRPILTEDSILEIQNGRHALQEMTVDTFVPNDTKIRSSGRINIITGPNYSGKSIYIKQ 700
Query: 572 VALIVFLSHIGSFVPADAATVGLTD-------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
VAL+VFL+HIGSFVPAD+A VGLTD SK MT+EQS+FMIDLHQVG MLR ATS+
Sbjct: 701 VALVVFLAHIGSFVPADSAIVGLTDRIFCAMGSKSMTSEQSTFMIDLHQVGTMLRHATSR 760
Query: 625 SLCLLDEFGKGTLTE--DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
SLCLLDEFGKGTLTE +GIGLLGGTI++F D PPKVL+ THLT++ E LP+SE +
Sbjct: 761 SLCLLDEFGKGTLTEGKNGIGLLGGTISHFTDYDCPPKVLLSTHLTQIFTESYLPQSEHI 820
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K YTMSVL P+ TD ED++FLYRLVPG ALLS+GLHCA LAGVP+EV++RA VL
Sbjct: 821 KCYTMSVLNPDEQ-TDNEDVIFLYRLVPGQALLSFGLHCAQLAGVPSEVVQRAVTVLGDI 879
Query: 743 QNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQDLLPS 790
+ + + R E ++A+DQQY++AV K+LAFD KGDL FFQ++ PS
Sbjct: 880 HSKRPIRRMVWEKLAAKDQQYQDAVTKLLAFDPHKGDLVNFFQEVFPS 927
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 27/152 (17%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV+MAC++ G RVG++YYDSS+ QL VLE+WED DFPLID+
Sbjct: 253 QVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDL----------------- 295
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
D EAP VKL+KSS FSYEQAWHRL+YL+V MD+GLS+KERIC+LNSM
Sbjct: 296 ----------DCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAMDEGLSVKERICFLNSM 345
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKE 153
MD+GS+VQVRA+GGLLA+L+NER++DTL+Q E
Sbjct: 346 MDLGSDVQVRAAGGLLAILDNERLLDTLDQME 377
>gi|9294568|dbj|BAB02831.1| unnamed protein product [Arabidopsis thaliana]
Length = 748
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 326/554 (58%), Positives = 383/554 (69%), Gaps = 85/554 (15%)
Query: 308 ESLREQLRLLNFDIVEKAASCITTELAYVYEL-----VIGIIDVNRSKEKGYGTLVREGF 362
ESLRE +R N DI+EKA CI+TEL YVYEL VIG+IDV RSKE+GY TLV+EGF
Sbjct: 209 ESLREHMRRFNLDIIEKAGLCISTELDYVYELTITPQVIGVIDVTRSKERGYQTLVKEGF 268
Query: 363 CDE---------LDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
C E LDELRQIYEELPEFL+EV+++EL PHL KE PCIVYI QIG
Sbjct: 269 CAEVIIEVHFVQLDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGG-- 326
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMD----GETKRLFYHTPKTRELDNLLGDIYHKILDM 469
++ F+F S + ET+R FYHT KTRELDNLLGDIYHKILDM
Sbjct: 327 ------------SEVSRFKFDISSIQCYILKETQRFFYHTSKTRELDNLLGDIYHKILDM 374
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
ERAI RDL+SH LFS HLLKAVNF AELDC LSLA VAHQNNY+RP+LT+E LLDI+NG
Sbjct: 375 ERAIIRDLLSHTLLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTVESLLDIRNG 434
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RHVLQEM VDTFIPNDT I+++GRI+IITGPNYSGKSIY+KQVALIVFLSHIGSFVPADA
Sbjct: 435 RHVLQEMAVDTFIPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADA 494
Query: 590 ATVGLTD------------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
ATVGLTD K + + ++ D QATS+SLCLLDEFGKGTL
Sbjct: 495 ATVGLTDRLVVLQQDLLCNGKQVHDRGAIYIHDRSASSRNDAQATSRSLCLLDEFGKGTL 554
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
TEDGIGLLGGTI++F TC PP+V+VCTHLTELLNE CLP SE++KFYTMSVLRP+ S
Sbjct: 555 TEDGIGLLGGTISHFATCAEPPRVVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESA 614
Query: 698 DVEDIVFLYRLVPGHALLSYGLH-CA---------------------------------- 722
++E+IVFLYRL+PG LLSYG H C
Sbjct: 615 NMEEIVFLYRLIPGQTLLSYGEHFCPLRYCLHDLLVYTPSFIKPIYVMQAFTVRYSLSNK 674
Query: 723 ------LLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVL 776
L+ GVP EV+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K D+
Sbjct: 675 RKFSLLLMQGVPEEVVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDIS 734
Query: 777 KGDLRLFFQDLLPS 790
KGD+ FFQD+ S
Sbjct: 735 KGDIHAFFQDIFTS 748
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 149/167 (89%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACI HG RVGVSYYD S+RQLHVLE WE+ SDF LI++VKYQA+P IIY STKSE
Sbjct: 12 QVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPSIIYASTKSE 71
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESF++AL+++DGT E VKLVKSS FSYEQAWHRL+YLRVTGMDDGL+IKERICYL+SM
Sbjct: 72 ESFVAALQQNDGTDETTMVKLVKSSTFSYEQAWHRLVYLRVTGMDDGLNIKERICYLSSM 131
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVS 168
MD+GSEVQVR SGGLLA+LE+ERIV+TLEQ ESG+ASI IDSV+E +
Sbjct: 132 MDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMECA 178
>gi|45773926|gb|AAS76767.1| At3g20475 [Arabidopsis thaliana]
Length = 360
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/360 (75%), Positives = 312/360 (86%), Gaps = 7/360 (1%)
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
MDGET+R FYHT KTRELDNLLGDIYHKILDMERAI RDL+SH LFS HLLKAVNF AE
Sbjct: 1 MDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAVNFVAE 60
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINII 557
LDC LSLA VAHQNNY+RP+LT+E LLDI+NGRHVLQEM VDTFIPNDT I+++GRI+II
Sbjct: 61 LDCILSLACVAHQNNYVRPVLTVESLLDIRNGRHVLQEMAVDTFIPNDTEINDNGRIHII 120
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------SKHMTAEQSSFMID 610
TGPNYSGKSIY+KQVALIVFLSHIGSFVPADAATVGLTD SK MTAEQS+FMID
Sbjct: 121 TGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMID 180
Query: 611 LHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL 670
LHQVGMMLRQATS+SLCLLDEFGKGTLTED IGLLGGTI++F TC PP+V+VCTHLTEL
Sbjct: 181 LHQVGMMLRQATSRSLCLLDEFGKGTLTEDDIGLLGGTISHFATCAEPPRVVVCTHLTEL 240
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
LNE CLP SE++KFYTMSVLRP+ S ++E+IVFLYRL+PG LLSYGLHCALLAGVP E
Sbjct: 241 LNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEE 300
Query: 731 VIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQDLLPS 790
V+KRAA VL+A ++N +V++ S + IS+QDQ +K+AV+K D+ KGD+ FFQD+ S
Sbjct: 301 VVKRAAIVLDAFESNNNVDKLSLDKISSQDQAFKDAVDKFAELDISKGDIHAFFQDIFTS 360
>gi|255578086|ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
gi|223530590|gb|EEF32467.1| conserved hypothetical protein [Ricinus communis]
Length = 351
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/324 (79%), Positives = 288/324 (88%), Gaps = 16/324 (4%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QVYMACILHGHRVG+SYYDSSIRQLHVLEVWED + DFPLID+VKYQAQP IY S+KSE
Sbjct: 9 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSLDFPLIDLVKYQAQPLTIYASSKSE 68
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
ESF++AL+RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGL+IKER+CYL+SM
Sbjct: 69 ESFINALQRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLNIKERVCYLSSM 128
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
MDMGSE+QVRASGGLLA+LENERIVDTL QKE G A+ITIDSV+E+SLNKFLKLDA AHE
Sbjct: 129 MDMGSEIQVRASGGLLAILENERIVDTLAQKECGTAAITIDSVVEISLNKFLKLDAAAHE 188
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQIFQ DKHPSHMGIGR+KEGFSVFGMMNKCVTP+G+RLLRNWFLRPI+DL
Sbjct: 189 ALQIFQIDKHPSHMGIGRSKEGFSVFGMMNKCVTPVGQRLLRNWFLRPIVDL-------- 240
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
E+LMASL ETLK+VKDIP +LKKFNSPS I T DWTAFLKSICSLLHV+KI
Sbjct: 241 --------EKLMASLRETLKHVKDIPRLLKKFNSPSSICTTGDWTAFLKSICSLLHVDKI 292
Query: 302 FEVGISESLREQLRLLNFDIVEKA 325
FE+G+SE LREQ + LN +I+EK+
Sbjct: 293 FELGMSEDLREQAKCLNVNIIEKS 316
>gi|255578084|ref|XP_002529912.1| ATP binding protein, putative [Ricinus communis]
gi|223530589|gb|EEF32466.1| ATP binding protein, putative [Ricinus communis]
Length = 328
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/329 (79%), Positives = 289/329 (87%), Gaps = 8/329 (2%)
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
MERAITRDLVSHI LFS LLKAVNF AELDC LSLALVA QNNY RPILT E LLDIQN
Sbjct: 1 MERAITRDLVSHILLFSTFLLKAVNFVAELDCLLSLALVARQNNYSRPILTEETLLDIQN 60
Query: 529 GRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
GRHVLQE+TVDTFIPNDT+I +DGR+NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD
Sbjct: 61 GRHVLQELTVDTFIPNDTKI-HDGRVNIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 119
Query: 589 AATVGLTD-------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
AATVGLTD SK M+AEQS+FMIDLHQVG++LRQ+TS+SLCLLDEFGKGTLTEDG
Sbjct: 120 AATVGLTDRIFCAMGSKLMSAEQSTFMIDLHQVGIILRQSTSRSLCLLDEFGKGTLTEDG 179
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+GLLGGTIN+FV CD PPKVLVCTHLTEL +E CLPKSE++KFYTMSVLRPENNSTDV D
Sbjct: 180 VGLLGGTINHFVACDDPPKVLVCTHLTELFSESCLPKSEKVKFYTMSVLRPENNSTDVGD 239
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
IVFLYRLVPGH L SYGLHCALLAGVP EVI+RAA VL+ NN ++R +ENIS QDQ
Sbjct: 240 IVFLYRLVPGHTLPSYGLHCALLAGVPEEVIRRAAIVLDTIGNNSRIDRLCNENISTQDQ 299
Query: 762 QYKNAVEKMLAFDVLKGDLRLFFQDLLPS 790
Q K+A++KML+FD+ KGDL L F+D+ PS
Sbjct: 300 QCKDALDKMLSFDIFKGDLNLLFKDIFPS 328
>gi|302768243|ref|XP_002967541.1| hypothetical protein SELMODRAFT_88713 [Selaginella moellendorffii]
gi|300164279|gb|EFJ30888.1| hypothetical protein SELMODRAFT_88713 [Selaginella moellendorffii]
Length = 540
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/545 (49%), Positives = 375/545 (68%), Gaps = 19/545 (3%)
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L T+K VK IP +L+KF SPSF+ + +DW+ FLKSI +L+ + + +S S +++++
Sbjct: 1 LQNTMKQVKSIPRLLQKFASPSFLSSRTDWSTFLKSINALIEIRQTLAAFLS-SRQDRVQ 59
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
+ N +I +K S +T + AYV +LV G++D +++ + T V G C ELDEL+ IY+
Sbjct: 60 ISNLEIFQKVFSTVTEDFAYVSDLVKGVLDFDQTCGEACDTFVARGICQELDELKAIYDG 119
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
LP+FL+E+AS E+ +LPH + IVYI Q+GYLMC F +L LE F+ AF
Sbjct: 120 LPQFLDEIASSEIKKLPHQRQG----SIVYIPQVGYLMC-FPGELKPEVLEIAPDFQLAF 174
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
G + FYHT KTRELD +LGDIY+KILDMERAI ++L S + + + + +
Sbjct: 175 KSGCGNDEEFFYHTTKTRELDEVLGDIYYKILDMERAILKELESKVQKYEPAVRYSADLT 234
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN 555
A+LDC +S+A+ A + NY RP L + +L I+NGRH LQE+TVDTF+PN+T+I+ GRI
Sbjct: 235 AQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRIC 294
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
++TGPNYSGKS+YIKQVALIVFLSHIGSFVPAD A +G+TD + QS+F
Sbjct: 295 VVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGITDRIFTRLPCKQSTKVPQSTF 354
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M DLHQ+ +MLR ATS+SLCL+DEFG GT++ DGIGLL T+++F + PK+L CTH
Sbjct: 355 MTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHF 414
Query: 668 TELLNEGC-LPKSERLKFYTMSVLRPENNSTD---VEDIVFLYRLVPGHALLSYGLHCAL 723
+E L+EGC LPKS+R+ FYTMS+L P N+ D + DIVFLYRLVPG+ SYGLHCA
Sbjct: 415 SE-LSEGCFLPKSQRIAFYTMSILEPTGNNGDPNRLADIVFLYRLVPGYQAPSYGLHCAE 473
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLF 783
LAGVP E+I RAA +LE+ + K + R I A+D++Y+ V++++AFD GD+ F
Sbjct: 474 LAGVPHEIINRAAEILESMKMGKPIHRLQVPKIVARDREYQELVDQLVAFDCKNGDVNKF 533
Query: 784 FQDLL 788
+LL
Sbjct: 534 LHELL 538
>gi|302800090|ref|XP_002981803.1| hypothetical protein SELMODRAFT_115165 [Selaginella moellendorffii]
gi|300150635|gb|EFJ17285.1| hypothetical protein SELMODRAFT_115165 [Selaginella moellendorffii]
Length = 540
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/545 (49%), Positives = 373/545 (68%), Gaps = 19/545 (3%)
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L T+K VK IP +L+KF SPSF+ + +DW+ FLKSI +L+ + + +S S +++++
Sbjct: 1 LQNTMKQVKSIPRLLQKFASPSFLSSRTDWSTFLKSINALIEIRQTLAAFLS-SRQDRVQ 59
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
+ N +I +K S +T + AYV +LV G++D +++ + T V G C ELDEL+ IY+
Sbjct: 60 ISNLEIFQKVFSTVTEDFAYVSDLVKGVLDFDQTCGEACDTFVARGICQELDELKAIYDG 119
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
LP+FL+E+AS E+ +LP + IVYI Q+GYLMC F +L LE F+ AF
Sbjct: 120 LPQFLDEIASSEIKKLPRQRQG----SIVYIPQVGYLMC-FPGELKPEVLEIAPDFQLAF 174
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
G + FYHT KTRELD +LGDIY+KILDMERAI ++L S + + + + +
Sbjct: 175 KSGCGNDEEFFYHTTKTRELDEVLGDIYYKILDMERAILKELESKVQKYEPAVRYSADLT 234
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN 555
A+LDC +S+A+ A + NY RP L + +L I+NGRH LQE+TVDTF+PN+T+I+ GRI+
Sbjct: 235 AQLDCLVSMAISAGEYNYNRPRLVEDDILIIKNGRHPLQELTVDTFVPNNTQIEEKGRIS 294
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
++TGPNYSGKS+YIKQVALIVFLSHIGSFVPAD A +G TD + QS+F
Sbjct: 295 VVTGPNYSGKSVYIKQVALIVFLSHIGSFVPADEAVIGTTDRIFTRLPCKQSTKVPQSTF 354
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M DLHQ+ +MLR ATS+SLCL+DEFG GT++ DGIGLL T+++F + PK+L CTH
Sbjct: 355 MTDLHQISVMLRYATSKSLCLIDEFGSGTMSADGIGLLCSTLHHFAGSESSPKILACTHF 414
Query: 668 TELLNEGC-LPKSERLKFYTMSVLRPENNSTD---VEDIVFLYRLVPGHALLSYGLHCAL 723
+E L+EGC LPKS R+ FYTMS+L P N+ D + DIVFLYRLVPG+ SYGLHCA
Sbjct: 415 SE-LSEGCFLPKSPRIAFYTMSILEPTGNNGDPNRLADIVFLYRLVPGYQAPSYGLHCAE 473
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLF 783
LAGVP E+I RAA +LE+ + K + R I A+D++Y+ V++++AFD GD+ F
Sbjct: 474 LAGVPHEIINRAAEILESMKMGKSIHRLQVPKIVARDREYQELVDQLVAFDCKNGDVNKF 533
Query: 784 FQDLL 788
+LL
Sbjct: 534 LHELL 538
>gi|357494571|ref|XP_003617574.1| DNA mismatch repair protein mutS [Medicago truncatula]
gi|355518909|gb|AET00533.1| DNA mismatch repair protein mutS [Medicago truncatula]
Length = 418
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/367 (63%), Positives = 270/367 (73%), Gaps = 47/367 (12%)
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
MERAITRDL SH+ LFS HL K FAAELDCFLS+ALVA QNNY+RP+LT E LLDI+N
Sbjct: 49 MERAITRDLFSHVSLFSTHLTKVATFAAELDCFLSMALVARQNNYVRPVLTEENLLDIKN 108
Query: 529 GRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
GRHVLQEMTVDTFIPNDT+I +DGR+NIITGPN+SGKSIYIKQVA+IVFL+HIGSFVPAD
Sbjct: 109 GRHVLQEMTVDTFIPNDTKIFHDGRVNIITGPNFSGKSIYIKQVAIIVFLAHIGSFVPAD 168
Query: 589 AATVGLTD--------------------------------SKHMTAEQSSFMIDLHQVGM 616
AATVGLTD S+ MTAEQS+FMIDLHQ+GM
Sbjct: 169 AATVGLTDRYDFLVSQVFYEIGVHLYFFGDQNCRIFCATGSRLMTAEQSTFMIDLHQIGM 228
Query: 617 MLR--------QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
MLR ATS+SLCL+DEFGKGTLTEDGIGLL G IN+F+TCD PPKV VCTHL
Sbjct: 229 MLRYAEKKTDKHATSRSLCLVDEFGKGTLTEDGIGLLAGAINHFITCDEPPKVFVCTHLM 288
Query: 669 ELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR--LVPGHALLSY-----GLHC 721
+LL+ L KSE++KFYTMS+LRPE++ST +EDIVFLYR V + Y C
Sbjct: 289 DLLHGCSLTKSEQIKFYTMSILRPEDDSTHIEDIVFLYRYLFVDSGCTVHYLQDQKSSSC 348
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLR 781
+ AGVP E+IKRAA VL+A N VER +ENISAQD +YK+A+EK+L FDV GDL
Sbjct: 349 IIYAGVPDEIIKRAAVVLDAVSKNNCVERLCNENISAQDDEYKDAMEKLLKFDVDNGDLN 408
Query: 782 LFFQDLL 788
LFF+D+
Sbjct: 409 LFFEDIF 415
>gi|156405605|ref|XP_001640822.1| predicted protein [Nematostella vectensis]
gi|156227958|gb|EDO48759.1| predicted protein [Nematostella vectensis]
Length = 889
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 270/775 (34%), Positives = 414/775 (53%), Gaps = 85/775 (10%)
Query: 1 MQVYMACILHGHRVGVSYYDSSIRQLHVL-EVWEDSNSDFPLIDIVKYQAQPQIIYTSTK 59
++ M + G ++GV+YYD+ +LH++ ++ E SDF + VK Q P II TS+K
Sbjct: 57 IKTIMCTVWSGSKLGVAYYDTFSSKLHLMMDIVE--TSDFQFLKRVKEQINPDIIVTSSK 114
Query: 60 SEESFLSALKRSDGTT------EAPTVKLVKSSIFSYEQAWHRLIYLR-VTGMDDGLSIK 112
EE F++ L+ +G + V+++ + F+ + R+I L + GM +
Sbjct: 115 QEERFIAVLQGKEGENNDEQLCQQTDVEVLPAIDFTVDACKRRIIALNGLPGMPQHFTDM 174
Query: 113 ERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKF 172
ER Y+ S++ + VRA+G LL LE +R LE + + I ++ S++
Sbjct: 175 ERTIYMTSLVPFDNVNMVRAAGALLKYLEKKRFGQELEDPD---VHVPILDLVVFSIDDM 231
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIG-RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+ +D + ALQIFQ + HPS G +KEG S+FG++N+ + +G RLLR WFLRP
Sbjct: 232 VIVDDNTYSALQIFQKESHPSVYKSGTSSKEGLSLFGVLNRTRSALGSRLLRMWFLRPTR 291
Query: 232 DLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDI----------------PHILKKF 273
D+ L R AI+FF +L+ASL + LK VK++ P IL +
Sbjct: 292 DILVLTERQKAITFFTTPRNIDLIASLQDCLKNVKNVSVRLYITKRELKVKSVPRILVRM 351
Query: 274 NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + +DW A K++ + +++ + SE I +K +T +L
Sbjct: 352 KTAQ--ASITDWQALYKTVYNAMYIADLCRTIPSE----------IAIAKKITVLVTQDL 399
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ L+ IID + S E+ +V+ G LDE ++ Y LP+F+ +VA EL +L
Sbjct: 400 HNIASLINTIIDFDDSTEQNR-FVVKPGVDPALDERKRTYNGLPDFMTKVARKELNKL-- 456
Query: 394 LCKEMFVPC-IVYIHQIGYLMCIFEE-KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
V C ++Y+ Q+GYL+ + K+ + ++ G +F F ++Y +
Sbjct: 457 --NPSIVECNVIYLPQLGYLLAVPRTTKMKEEKDFEMDGLDFVFL----SNNMVYYKSAS 510
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
TR D E AI L S I + LL + AELDC +SLA+ A +N
Sbjct: 511 TR--------------DHETAIMHRLQSTILERTKVLLDVMECTAELDCLISLAVSAREN 556
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIK 570
NY+ P +T + +L I G H LQE+ V F+PNDT I+ D GR+ I+TGPN SGKS+Y+K
Sbjct: 557 NYVCPEITSKSILHITGGMHPLQELCVSQFVPNDTAINEDSGRVVILTGPNASGKSVYLK 616
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
QV LIVFL+HIGSFVPA++A +G+TD + ++ S+FMIDL+QV ++ AT
Sbjct: 617 QVGLIVFLAHIGSFVPAESAIIGVTDRLFTRIHTRETVSVGLSTFMIDLNQVASAIQSAT 676
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSER 681
+SL L+DEFGKGT T DG+ LL T+ +++ PK LV TH L+ + LP
Sbjct: 677 DKSLVLIDEFGKGTATVDGLSLLCATLRHWLASSSKCPKTLVSTHFHSLIRQKLLPDIPI 736
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
L+F T V++ D +++VFLY LV GHA SY H A LAG+P ++KR
Sbjct: 737 LRFQTTEVIQ------DGKELVFLYHLVDGHAKTSYASHIAALAGMPEHLVKRGT 785
>gi|340379509|ref|XP_003388269.1| PREDICTED: mutS protein homolog 5 [Amphimedon queenslandica]
Length = 837
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 275/824 (33%), Positives = 453/824 (54%), Gaps = 69/824 (8%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHV-LEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
Q+ M+ + +G +G+SYYD+ QL + L+V E D+ ++ V Q +P +I TS+K
Sbjct: 43 QLIMSVLYNGGCLGLSYYDTESGQLCIMLDVAE--TKDYEILKRVIMQVEPSVILTSSKQ 100
Query: 61 EESFLSALK---RSDGTTEAP-----TVKLVKSSIFSYEQAWHRLIYLRVTGMD------ 106
+E+ LK +G T + +V+++ S F YE A R++ G+
Sbjct: 101 DENMQQILKDCSSPEGDTGSIFAFSISVEVLPSVEFKYETAHRRIMSYSWPGVQGAGTGE 160
Query: 107 ---DGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDS 163
+G+ KER ++S++ M S VR++G LL L+ +RI LE + I S
Sbjct: 161 GRAEGIE-KEREVRISSIIPMDSSNMVRSTGALLKYLDKKRIGIELEDI---GTHVPILS 216
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPS-HMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
V +L+ L +D TA +L+IF + HPS + G +KEG S+FG+ N + +G +LL
Sbjct: 217 VKRFTLDDLLLMDETAFSSLRIFYRENHPSVYKGSSGSKEGLSLFGIANHTRSSLGHKLL 276
Query: 223 RNWFLRPILDLENLNSRLNAISFF--LCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+ WFLRP+ D+ L+ RL+AI + + + E +ASL + LK +K+IP IL + +
Sbjct: 277 KLWFLRPLKDIGTLSKRLDAIEYLSLIKNNETVASLTDCLKNIKNIPRILVRMSQSHL-- 334
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ +DW + K+ + +++ ++ +L + N I +K ++ L + L+
Sbjct: 335 SITDWQSLYKTTFNAINICEL-----CSTLPQ-----NIYIFKKIKGVLSDGLYQIASLI 384
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
++D S + +V+ G +LDE + ++ L + + +VA+ EL L KE V
Sbjct: 385 TKVVDFEESVAQNR-FVVKYGVNSDLDEKKHTFDGLTDLMTKVAATELAGLDPEVKECQV 443
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLE---QLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+Y+ QIG+L+ EK+ E ++ FAF + Y T T ELD+
Sbjct: 444 ---IYVPQIGFLLRF--EKVSWMKQEPDFHIKDMTFAFL----SEGHVHYRTKATIELDD 494
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
LLGD I D E A+ L S + S L+ + ELDC +S++ +A ++N+++P
Sbjct: 495 LLGDTQWDIHDAETAMMHRLQSVLMEHSGALISVIECTTELDCLVSMSKLAKEHNFVKPE 554
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIV 576
LT + ++ I+NGRH LQE+ V+TF+PNDT D+ G + I+TG N SGKS+Y+ QV LIV
Sbjct: 555 LTEDNVIYIKNGRHPLQELCVNTFVPNDTVSDSAHGTMKILTGANASGKSVYLTQVGLIV 614
Query: 577 FLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
+L+HIGSFVPA+AA +G+ D + ++ QS+F+ID++QV ++ T +SL L
Sbjct: 615 YLAHIGSFVPAEAAKIGIMDGIFTRVQTRESVSIAQSTFLIDINQVSTAVQCGTHRSLIL 674
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDEFGKGT T DG+ LL + +++ + P +LV TH LL++ LP SE +++ TM
Sbjct: 675 LDEFGKGTATVDGLALLAAVLRHWLKKEEECPHILVSTHFHSLLDQKLLPDSELIEYLTM 734
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ D ++VFLY+LVPG + S+ H A G+P E+I+RA V + + N+
Sbjct: 735 DTIN------DKGELVFLYQLVPGKSDTSHACHIAATVGLPPEIIERAQKVSQQIRCNEP 788
Query: 748 VERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQD-LLPS 790
V + + N A+ + + V + + D+ K D+ F QD +LP+
Sbjct: 789 VTQINDANTEAKTKVCIDIVNRFMELDLEKDDVVGFLQDYVLPT 832
>gi|443688846|gb|ELT91413.1| hypothetical protein CAPTEDRAFT_89832 [Capitella teleta]
Length = 787
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 265/806 (32%), Positives = 421/806 (52%), Gaps = 58/806 (7%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV+M+ + ++ V+YYD + QLH++ DS D ++ V Q QP I S+K +
Sbjct: 11 QVFMSVVWRAGQLSVAYYDVNSSQLHLMPDTLDSWHDHHIMTTVLKQVQPTCIIVSSKQD 70
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIF---SYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
++F+ LK + + T+ V ++F S + RL L+++ M ++ E+ Y+
Sbjct: 71 DNFVRMLKHA--SCSECTLLEVTDTVFIMPSLRRNRQRLFALKLSSMPSHFTVAEKKMYI 128
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
NS++ M +E ++A G L+ ++ R+ LE S + + ++ SL+ + LD
Sbjct: 129 NSLIPMDNERMIQAGGALMKYVDKLRVGVELE---SNRVRVPVLNISVFSLDNLMMLDKN 185
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGF-SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
A LQIFQ+ HPS G +KEG + C + R+WFL+P DLE L
Sbjct: 186 AFSVLQIFQSYSHPSAYKAGSSKEGLIAAVRFQMHCRGSNTVVVFRSWFLQPSRDLETLT 245
Query: 238 SRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
R NA++F + E+ +++ + V D+ IL + + +DW K++ ++
Sbjct: 246 QRHNAVAFLSSAANIEMTSAMSSCIGNVTDVSRILTRMTKAE--ASITDWKNIYKTVYAI 303
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+++ I ++ DI+ + SC+ +L + EL+ +D + S +
Sbjct: 304 INIADICSSCDAD----------VDILIELKSCVNEDLYCIAELISSTVDFDESAAQNRF 353
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
V+ D+LDEL + Y LP+F+ +VAS EL +L KE V +Y+ Q+GYL+ I
Sbjct: 354 K-VKLSVNDKLDELNRTYSGLPDFMTKVASRELDKLNDPIKECNV---IYLPQLGYLLAI 409
Query: 416 FEEKLD--DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
++D D + ++ EF F L Y + T+ELD++LGDI +I+D I
Sbjct: 410 PAAQVDKGDNNYD-IENLEFTFL----SNNMLHYRSANTKELDSVLGDIQCEIID---NI 461
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
L I L S L++AV A+LDC LS A A NY RP + + I GRH L
Sbjct: 462 LHKLQDKILLQSQLLIRAVQLCAQLDCLLSFACCAKNYNYCRPEIVADQDYSIVEGRHPL 521
Query: 534 QEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
QE+ F+PN+ +N ++ + TGPN SGKS+Y+KQVALIV+++HIG FVPA A +
Sbjct: 522 QELCRSPFVPNNFESGNNSSKVKVFTGPNASGKSVYLKQVALIVYMAHIGCFVPAKEAKI 581
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
TD ++ ++ E SSFM++L+Q+ +R AT SL ++DEFG+GT DG L
Sbjct: 582 QPTDRVFTHVQGTESVSTEMSSFMMELNQMTQAVRYATVNSLVIMDEFGRGTNRNDGEAL 641
Query: 645 LGGTINYFVTCD--VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDI 702
L IN+F+T P VLV TH L + KS+ L F T+ V + E++
Sbjct: 642 LTSCINHFLTKGRRACPHVLVSTHFHSLFERKLIIKSDLLSFQTLEV------HIEGEEL 695
Query: 703 VFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQ 762
VFLY++V G A SY H A LAG+PAEV++R + V Q N+ V ++ +N + ++
Sbjct: 696 VFLYQVVNGVARRSYACHIAGLAGLPAEVVQRGSEVFNLVQRNEPVLQYGRKN--DEVKR 753
Query: 763 YKNAVEKMLAFD--VLKGDLRLFFQD 786
+ V K L D + D+R F QD
Sbjct: 754 CEAVVTKFLKLDLNMESADIRKFLQD 779
>gi|198415494|ref|XP_002119672.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 857
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 248/788 (31%), Positives = 409/788 (51%), Gaps = 62/788 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
VY++ + + ++G +YY+S + ++ LE +S S F ++ + + P I TS K +
Sbjct: 31 VYLSVVWYSGKLGAAYYESESQIIYFLEASVES-SPFERVERLINELLPTTIITSAKQDP 89
Query: 63 SFLSALK--------RSDGTTEA-------------PTVKLVKSSIFSYEQAWHRLIYLR 101
F+ LK + T E TV+++ S F Y+ + R++ +
Sbjct: 90 DFVEKLKIFAEKETNSGEKTLEGNISNESVNVNENCATVEMLSSMEFRYDNSKRRILLVN 149
Query: 102 VTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+ M D + ER Y++S++ + + VRA+GGLL L+ R+ LE E I
Sbjct: 150 LLAMPDHYTESERAVYMSSLVQLDNHCSVRAAGGLLRFLDKNRVGVGLESSE---VQTPI 206
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRL 221
+ + +L + +D +++ALQIF+ +HPS +G KEG S+FG++N+ T +GRR+
Sbjct: 207 ATFMNFTLKHAMSMDTASYDALQIFKQLRHPSAYKVGY-KEGISLFGILNRTTTTVGRRM 265
Query: 222 LRNWFLRPILDLENLNSRLNAISFFLCS--EELMASLHETLKYVKDIPHILKKFNSPSFI 279
L++WF RP DL+ L RL+A+ + EE + S+ + LK VK + ++ K +
Sbjct: 266 LKSWFFRPTTDLKVLTERLDAVEYLANPRHEETLNSVKDCLKKVKTVSNMFVKLRTSKL- 324
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
+ S+W ++ + L + + + E L+ DI A T +L V +
Sbjct: 325 -SVSEWVGLWETAQNALRIADLCRSAVLAP--EATPLIFSDI----ARTFTQDLVSVVTV 377
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ I+D+ SK +G +V+ G + LD+++ Y +LP L ++A+ EL + +
Sbjct: 378 IGNIMDIPSSKTEG-KFVVKSGVSEMLDDMKATYAKLPALLGQLATKELAKY----SDYI 432
Query: 400 VPC-IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
C +VY+ +GYL+ I + +++ + L G E D ++Y TP T+ LD
Sbjct: 433 SSCQVVYMRLVGYLLFITKTDEMKSSGNLTLPGTEVVGDCQD----TVYYKTPATKVLDE 488
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
GDI +I D E +I DL + ++ LL + FAA+LDC S A VA NY +PI
Sbjct: 489 NYGDILEEISDKEASIISDLQETLTPYTQALLDVMRFAAKLDCLASFASVAKDFNYTKPI 548
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIV 576
L + + ++ RH LQE +V F+PND D++ G I ++TGPN SGKS+YIKQ+ LIV
Sbjct: 549 LKTDRRICVKGSRHPLQEHSVSLFVPNDVVFDHESGIIKVLTGPNASGKSVYIKQIGLIV 608
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
F++ IGSFVPA++A +GL D + ++ S+F DL Q+ + ATS+SL L
Sbjct: 609 FMAQIGSFVPAESAEIGLVDKIYTRIKSKESISCGMSTFAKDLGQISTAVNGATSRSLIL 668
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
+DEFGKGT T DG+ LL + +++ D P+V+ TH + LP S L+F TM
Sbjct: 669 IDEFGKGTATVDGVSLLASVLTHWLAKGDTSPRVICATHFHAVARRNLLPTSPALRFVTM 728
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ E + V LY+L G + SY AL +P EV+ R + E + N
Sbjct: 729 ETIPGERT-----ERVSLYQLKEGISEQSYACEIALQVRIPPEVVSRGKEISELIRKNVP 783
Query: 748 VERWSHEN 755
+ ++ +
Sbjct: 784 IRPYNRSS 791
>gi|384246083|gb|EIE19574.1| hypothetical protein COCSUDRAFT_58323 [Coccomyxa subellipsoidea
C-169]
Length = 865
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/469 (42%), Positives = 283/469 (60%), Gaps = 18/469 (3%)
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
IV KAA CI + L + ++ +I+ ++ + L+ G D+LD L+ Y LP+FL
Sbjct: 382 IVRKAADCIDSALLTCHSMIANVINPDQEE----AMLIAVGVSDKLDALKHAYHGLPDFL 437
Query: 381 EEVASLELVQLPHLCKEMF---VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
V E+ ++P + F + I+Y+ Q+G+L+ + ++ E L +EFAF D
Sbjct: 438 TRVVEAEMGRIPRHLSDAFKQQLWSIIYMPQVGFLVRVEGRRMTADVEEYLPDYEFAFED 497
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
E ++Y +TR+L GD+ H+I D+E +I +L+ + F L +AV AAE
Sbjct: 498 ASAEGSGMYYRCERTRDLQAEFGDMLHRIHDLENSICSELIQRLAAFGPSLSRAVALAAE 557
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINI 556
+DC LSLA A Y RP LT + +L I+ GRH L E+ VD FIPNDT + D R+ +
Sbjct: 558 VDCLLSLAQCARDFGYSRPRLTQDNVLHIKQGRHPLAELVVDRFIPNDTAMHADSARVQV 617
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPNYSGKS Y KQVALIVFL+HIGSFVPA ATVGLTD ++ + QS+FM
Sbjct: 618 ITGPNYSGKSCYAKQVALIVFLAHIGSFVPAAEATVGLTDRIFTRIVTTEAQSVPQSAFM 677
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
ID+ QV MLR A +SLC++DEFGKGTL DG GLL + +F P+V+ TH
Sbjct: 678 IDMSQVSNMLRHAGPRSLCIIDEFGKGTLAADGFGLLCAVLRHFTAQRPSPRVIAVTHFI 737
Query: 669 ELLNEGCLPKSERLKFYTMSVLRPENNST--DVEDIVFLYRLVPGHALLSYGLHCALLAG 726
E+L+E L +S +L F+TM+VL ++ST + +VFLY LVPG+A S+G+HCA LAG
Sbjct: 738 EVLHEAYLRRSPQLAFFTMNVLTEADSSTPGQADRVVFLYTLVPGYAAPSFGIHCAQLAG 797
Query: 727 VPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDV 775
V +++RA VLE +E E +A + +YK+ +E+++A D+
Sbjct: 798 VSQNILQRAKQVLEHRSKGSALEGKKSERQAAMEARYKHLLERLMATDL 846
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 169/287 (58%), Gaps = 18/287 (6%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPL--IDIVKYQAQPQIIYTSTKSEE 62
MA +G++ +DSS ++ V++ E+S F + + K Q P++IYTS K+++
Sbjct: 1 MAAFHQSGSLGLACFDSSTAEVLVMQTNEESRGPFAYQSLQLAKLQFNPEVIYTSAKADQ 60
Query: 63 SFLSALKRSDGTTEAPT---VKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
FL ALK+ G + V+L KS +F +A L L V GM +GLS++ER+ LN
Sbjct: 61 EFLDALKQGSGVDASDGEFEVRLEKSRLFHPNEAMGYLQMLHVRGMREGLSVQERMHVLN 120
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
+MM + + Q GLL + +D+ + + ++D + E L+ L +D +
Sbjct: 121 TMMSLSATQQ-----GLLTAPTD---MDSEMEFQ-----FSVDRLAEFLLHGQLIVDPAS 167
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
ALQIFQ ++HPS MG+G++KEGFS+FGM+NKCV+PMG+RLL+ WF RPI++L L R
Sbjct: 168 MRALQIFQEEQHPSAMGVGQSKEGFSIFGMLNKCVSPMGKRLLKLWFSRPIVNLAVLQDR 227
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
+ I + + ++M SL + L+ +KD+P +L++ + + D+T
Sbjct: 228 QDTIEALMRAPDVMKSLRDVLRKIKDVPKLLQRLQAMQSLLDVRDFT 274
>gi|449497597|ref|XP_002190135.2| PREDICTED: mutS protein homolog 5 [Taeniopygia guttata]
Length = 999
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 261/819 (31%), Positives = 428/819 (52%), Gaps = 66/819 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+M+ + + ++ ++YYD+ ++ + D N D L+ V + PQ I TS K ++
Sbjct: 211 THMSVLWYAGQLAITYYDTEDCSVYFMPDIPD-NEDLKLLQKVIGELNPQCIVTSAKQDQ 269
Query: 63 S---FLSALKRSDGTTE--APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
+ FL+ L + G + P + L + F E + R++ + + ++ ++I Y
Sbjct: 270 NIAKFLTNLTATSGDKDIGKPEIVLFPNIDFGLEVSKQRILSRQFPFIPSHMTATDKILY 329
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S++ S + +RA GGLL L+ R+ LE + ++ I + + L+ + LD
Sbjct: 330 LSSIIPFESPLMIRALGGLLKFLDRRRVGVELED---SSIAVPILAFKKFVLSDTVNLDQ 386
Query: 178 TAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ LQIF++D HPS + KEGFS+FG++N+C G +LLR W RP ++ L
Sbjct: 387 DTYCVLQIFKSDIHPSVYKLSSGLKEGFSLFGILNRCRCKWGEKLLRLWLTRPTRNVTEL 446
Query: 237 NSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
N RL+ I+FFL ++ E + +L LK +K++P ILK+ + DW A K+ +
Sbjct: 447 NKRLDVINFFLLAQNHETVLTLQNCLKNIKNVPLILKRMTLSN--TKVRDWQALYKTAYN 504
Query: 295 LLHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
+ LR+ R L ++ + + T +L Y+ L+ ++D S +
Sbjct: 505 AV------------CLRDTCRSLPNTIELFQTISRVFTDDLHYIANLISKVVDFEGSLSE 552
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIG 410
T +R +DE ++ LP+FL EVA EL L + +P ++YI IG
Sbjct: 553 NRFT-IRPNVDAAIDEKKRKLMGLPDFLTEVAQKELEAL-----DNHIPACSVIYIPLIG 606
Query: 411 YLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+L+ I +D T E ++G +F F D +L Y + +T+ELD+LLGD++ +I D
Sbjct: 607 FLLSIPRLPNMVDKTDFE-IEGLDFMFLSED----KLHYRSARTKELDSLLGDLHSEIRD 661
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
E I L + I S+ L + + A LD L+LA +A +N Y RP T I++
Sbjct: 662 QEALIMHQLQTKILEKSEVLNSVIEYTAHLDVLLALAAMARENAYCRPRFTHRHGFHIKD 721
Query: 529 GRHVLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
GRH L E+ TF+ N + RI IITGPN SGKS+Y+KQV LIVF++ IGS+VPA
Sbjct: 722 GRHPLMELCAKTFVANPVDSGEATRRIKIITGPNSSGKSVYLKQVGLIVFMALIGSYVPA 781
Query: 588 D----AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
A +G+ D + ++ S+FMIDL+QV + AT +SL L+DEFGKG
Sbjct: 782 QRQRLKAEIGVIDGIYTRIHSRESVSVGLSTFMIDLNQVAKAVNNATERSLVLIDEFGKG 841
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ LL + Y++ P+V V T+ L+ LP + L++ TM
Sbjct: 842 TNTLDGLSLLAAVLRYWIRQGTQCPQVFVSTNFHSLMQLELLPDTPLLEYLTMET----- 896
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D E+++F Y++ G + +S+ + A LAG+PA++I R V E +N K ++R +
Sbjct: 897 -HQDGEELIFFYQIKQGMSTISHAANIAALAGMPAKIIDRGVEVSELIRNGKPIKRLDNP 955
Query: 755 NISAQDQQYKNAVEKMLAFDV--LKGDLRLFF-QDLLPS 790
+ + ++ K+ VEK L D+ + DL F +++LPS
Sbjct: 956 SKCDRMEKCKSVVEKFLCIDLDDPQVDLEEFMSKEVLPS 994
>gi|344307298|ref|XP_003422319.1| PREDICTED: mutS protein homolog 5 isoform 2 [Loxodonta africana]
Length = 832
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 267/816 (32%), Positives = 419/816 (51%), Gaps = 62/816 (7%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++++ + + +G++YYD+S +H + D + L+ V + PQ I TS K +
Sbjct: 47 EIHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHET-LKLLQRVLDEVNPQSIVTSAKQD 105
Query: 62 ES---FLSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E+ FL L R + P + + S F E + RL+ + + D ++ E+I +
Sbjct: 106 ENMTRFLGKLASREPAEPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILF 165
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 166 LSSVVPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTHLVSIDQ 222
Query: 178 TAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L
Sbjct: 223 DTYSVLQIFKSESHPSVYKVATGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGEL 282
Query: 237 NSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
NSRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 283 NSRLDVIEFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYS 340
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 341 ALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENR 390
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYL 412
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L
Sbjct: 391 FT-VLPNIDPEIDEKKRRLIGLPSFLTEVARKELETL-----DSRIPSCSVIYIPLIGFL 444
Query: 413 MCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+ I F + D +E G +F F ++L Y + +T+ELD LLGD++ +I D
Sbjct: 445 LSIPRLPFMVEASDFEIE---GLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRD 497
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQ 527
E + L + + L + ++ A+ LD L+LA A Y RP T L + IQ
Sbjct: 498 QETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPHYTSRLLGVRIQ 557
Query: 528 NGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
NGRH L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVP
Sbjct: 558 NGRHPLMELCARTFVPNSAECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVP 617
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A+ A +G D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T
Sbjct: 618 AEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEQSLVLIDEFGKGTNT 677
Query: 639 EDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
DG+ LL + +++ + P++ V T+ L+ LP+ +K+ TM
Sbjct: 678 VDGLALLAAVLRHWLALGPMCPQIFVATNFLSLVQLQLLPQGPLIKYLTM------ETCE 731
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D +D+VF Y++ G A S+ H A+ AG+P ++I R V + ++ K ++ +
Sbjct: 732 DGDDLVFFYQICEGVANASHASHTAVQAGLPDKLIARGKEVSDLIRSGKPIKPVKELLKN 791
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 792 TQMENCQTLVDKFLKLDLEDPNLDLDIFMSQEVLPA 827
>gi|403307825|ref|XP_003944383.1| PREDICTED: mutS protein homolog 5 [Saimiri boliviensis boliviensis]
Length = 834
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 263/817 (32%), Positives = 415/817 (50%), Gaps = 66/817 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 TMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N I I + L + +D
Sbjct: 169 SSVIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVGIPILGFKKFVLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELN 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L LR+ R L + + A + +L ++ L+ ++D S +
Sbjct: 344 L------------GLRDACRSLPKSIQLFRDIAHEFSDDLHHIASLIGKVVDFEGSLAEN 391
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 392 RFT-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGF 445
Query: 412 LMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
L+CI + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 446 LLCIPRLSSMVEASDFEIDGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQE 501
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ L + + L + ++ A+ LD L+LA A Y RP + P + IQNGR
Sbjct: 502 TLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSQVPGVRIQNGR 561
Query: 531 HVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
H L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQ+ LIVF++ +GSFVPA+
Sbjct: 562 HPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQIGLIVFMALVGSFVPAEE 621
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T D
Sbjct: 622 AEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVD 681
Query: 641 GIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 682 GLALLAAVLRHWLALGRTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETC 732
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D D+VF Y++ G A S+ H A+ AG+P ++ R V + ++ K ++
Sbjct: 733 EDGNDLVFFYQVCEGVAKASHASHTAIQAGLPNRLVARGKEVSDLIRSGKPIKPVKDLLK 792
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 793 KNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|290973176|ref|XP_002669325.1| predicted protein [Naegleria gruberi]
gi|284082871|gb|EFC36581.1| predicted protein [Naegleria gruberi]
Length = 924
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 262/801 (32%), Positives = 412/801 (51%), Gaps = 90/801 (11%)
Query: 7 CILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLS 66
C G R+GV+ +D + +L E E N+ F + VK++ +P +I ++ E+SF+
Sbjct: 118 CYQRG-RLGVAAFDMNSGELLCGETNE--NTLFEATEFVKFEVKPNLILVPSRLEQSFMK 174
Query: 67 ALKRS-DGTTEAP-TVKLVKSSIFSYEQAWHRLIYLR------------------VTGMD 106
+K+ +G E VKL+KSS FS E A ++ L ++
Sbjct: 175 HVKKPIEGAKEQQIEVKLLKSSDFSAENATKKIQLLENVLLGNQNDRMMTDEEPSTPILN 234
Query: 107 DGLSIKERICYL-------NSMMDMGS------EVQVRASGGLLAVLENERIVDTLEQKE 153
+G + ++ L ++M D S VRA GGLL ++ R+
Sbjct: 235 NGPAFLKQANRLRQVSEKNDNMFDFSSLYVEENTQTVRALGGLLCHIQTNRL-------- 286
Query: 154 SGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC 213
S I+ + + K KL + + + + HPS +G+ KEG S+FG+MNK
Sbjct: 287 SFGELDDIEVLKNIKNIKNFKLFSNQNSHAHVVTVESHPSS-SLGKPKEGLSLFGIMNKT 345
Query: 214 VTPMGRRLLRNWFLRPILDLENLNSRLNAISFF-LCSEELMASLHETLKYVKDIPHILKK 272
+ +G+ LLR WFL+P++DL+ + R +AI +F S++++ + E LK+VK+ I+ +
Sbjct: 346 KSSVGKDLLRQWFLKPVMDLDIIKKRHDAIDYFSRFSDDIIDEIRENLKFVKNTKRIINR 405
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIF-EVGISESLREQLRLLNFDIVEKAASCITT 331
T +DW+ K++ ++ +I E+ + S+ LLN D
Sbjct: 406 MREAK--ATVNDWSNLYKTLYCYKNITEILSEMDDNPSVEVAQDLLNHD---------NE 454
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
+ V + + I+D+ S+ + ++ G ELD RQ YE L FL+ VA E
Sbjct: 455 SIMKVLQAISKIVDLKESRSQNR-LVIMTGVNSELDNRRQTYESLDTFLDLVAQQESNSF 513
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ-GFEFAFSDMDGETKRLFYHTP 450
P F VY Q+G+L+ + + + + E Q G F FS + L++
Sbjct: 514 PEDFPFSFKA--VYYPQLGFLLVVDKNETSENYSEYAQYGLRFHFS----SDRSLYFKND 567
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
T ELD +GDI+H I++ E +I+ L ++ + D + K+ + A+LDC +S+A A +
Sbjct: 568 TTDELDTEVGDIHHLIIEQETSISVKLEKYVLQYHDQINKSNDLCAKLDCIISMANCASE 627
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIK 570
N RP++T E L+I+ G+++LQE+TVDTFIPNDT I I IITGPN SGKS Y+K
Sbjct: 628 FNLSRPVMTNESKLNIREGKNILQELTVDTFIPNDTNISE--CIQIITGPNNSGKSCYLK 685
Query: 571 QVALIVFLSHIGSFVPADAATV-GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
QV LIVF++HIGSFV A +V G+ D ++ QS+F ID+ Q+ M+ A
Sbjct: 686 QVGLIVFMAHIGSFVSASPESVIGVVDRIMTRIQSQDSISVSQSTFAIDVLQMKAMVDFA 745
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP-KSE 680
+S+SL L+DEFGKGTL DGI LL + +F + P+V+V TH E+L + S
Sbjct: 746 SSRSLLLIDEFGKGTLALDGIALLSAILKHFQEREHVPRVIVTTHYVEVLQHKIIDVNST 805
Query: 681 RLKFYTMSVLRPENNS------------TDVEDIVFLYRLVPGHALLSYGLHCALLAGVP 728
++F TM VL N ED+VFLY+L G + SYG+ A LAG+P
Sbjct: 806 SIQFMTMDVLIDSVNELPNDMEDEHFVVPSAEDLVFLYKLTRGKIIPSYGITVASLAGLP 865
Query: 729 AEVIKRAAYVLEAAQNNKHVE 749
++I+RA +V E +K +E
Sbjct: 866 NQIIERAKFVAERLSKSKPIE 886
>gi|334323704|ref|XP_003340425.1| PREDICTED: LOW QUALITY PROTEIN: mutS protein homolog 5-like
[Monodelphis domestica]
Length = 825
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 264/816 (32%), Positives = 424/816 (51%), Gaps = 62/816 (7%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
+ Y+ + + +G++YYD++ ++ L D + + L+ V + P+ I TS K +
Sbjct: 40 ETYLCVLWNSGCLGIAYYDTADSTIYFLPDTPDCD-NLKLLQRVVNEINPRSIITSAKQD 98
Query: 62 ES---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E+ FL L SD E P L+ S F E + R++ + M + L+ E+I +
Sbjct: 99 ENMAQFLGGLVSSDHKEQETPETVLLPSVDFGLEISKQRILSGNFSFMPESLTCTEKILF 158
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S++ + VRA GGL L R+ LE + S+ I + L + +D
Sbjct: 159 LSSIIPFDCPLMVRALGGLFKFLNRRRVNVELEDN---SVSVPILGFKKFVLTDLVSIDQ 215
Query: 178 TAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ LQIF+++ HPS + KEG S+FG++N+C + G +LLR W +RP DLE L
Sbjct: 216 DTYSVLQIFKSEIHPSVYKMASGLKEGLSLFGILNRCRSKGGEKLLRLWLMRPTQDLEEL 275
Query: 237 NSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK--FNSPSFIYTASDWTAFLKSI 292
NSRL+ I FFL + E+ +LH L ++K++P IL++ F+ P SDW K+
Sbjct: 276 NSRLDVIQFFLLPQNLEMALTLHGLLSHIKNVPLILRRMLFSHPK----VSDWRFLNKTA 331
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
S L + SL + +RL DI ++ + +L ++ L+ ++D+ S +
Sbjct: 332 YSALGLRDT-----CRSLPQSIRLFR-DIAQE----FSDDLHHIACLINKVVDLESSIAE 381
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP--CIVYIHQIG 410
T VR ++DE ++ LP FL EVA EL L + +P C++YI IG
Sbjct: 382 NRFT-VRPNIDPDIDEKKRKLMGLPSFLTEVARKELETL-----DSRIPSCCVLYIPLIG 435
Query: 411 YLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+L+ I +D + E + G +F F ++L Y + +T+ELD++LGD++ +I D
Sbjct: 436 FLLSIPRLPTMIDPSDFE-IVGLDFMFL----SEEKLHYRSARTKELDSILGDLHCEIRD 490
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQ 527
E + L + L + ++ A+ LD L+LA A Y RP + + L + IQ
Sbjct: 491 GETILMHQLQCQVLSRGAVLNRVIDLASRLDVLLALAGAARDYGYSRPQYSPKILGVRIQ 550
Query: 528 NGRHVLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+GRH L E+ TF+PN T+ +G RI +ITGPN SGKSIY+KQ+ LI F++ +GSFVP
Sbjct: 551 DGRHPLMELCSRTFVPNSTQSGEEGGRIKVITGPNSSGKSIYLKQIGLITFMALVGSFVP 610
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A VG D+ + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T
Sbjct: 611 AGKAEVGAVDAIFTRIHSRESVSLGLSTFMIDLNQVAKAVNSATERSLVLIDEFGKGTNT 670
Query: 639 EDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
DG+ LL + ++V+ P++ V T+ L+ LP +++ TM
Sbjct: 671 VDGLALLASVLRHWVSQGSSCPQIFVATNFLSLIQLQLLPPGSLVQYLTM------ETCE 724
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D +++F Y++ G A S+ H A AG+P ++I R V E +N K ++
Sbjct: 725 DGNELIFFYQVREGVANASHASHTAAQAGLPVKLITRGVEVSELIRNGKPIKPDKGLLKE 784
Query: 758 AQDQQYKNAVEKMLAFDV--LKGDLRLFF-QDLLPS 790
Q + + V+K L D+ K DL +F Q +LP+
Sbjct: 785 NQMENCQALVDKFLKLDLEDPKLDLSIFMSQQVLPT 820
>gi|440898783|gb|ELR50208.1| MutS protein-like protein 5 [Bos grunniens mutus]
Length = 831
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 265/816 (32%), Positives = 420/816 (51%), Gaps = 64/816 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 47 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEIDPRSVVTSAKQDE 105
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 106 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFLPDSMTTTEKILFL 165
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 166 SSIIPFDCLLMVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTNLVSIDQD 222
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 223 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELN 282
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSICS 294
SRL+ I FFL + L MA LH L ++K++P ILK+ + +T SDW K++ S
Sbjct: 283 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRM---TLSHTKVSDWQVLYKTVYS 339
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 340 ALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENR 389
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYL 412
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L
Sbjct: 390 FT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFL 443
Query: 413 MCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + +T+ +++G +F F ++L Y + +T+ELD LLGD++ I D E
Sbjct: 444 LSIPRLPSMVETSDFEIEGLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRDQET 499
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGR 530
+ L + + L + ++ A+ LD L+LA A Y RP + L + IQNGR
Sbjct: 500 LLMHQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPRLLGVRIQNGR 559
Query: 531 HVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
H L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+
Sbjct: 560 HPLMELCARTFVPNSAECGGDAGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEE 619
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +G D+ + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T DG
Sbjct: 620 AEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATERSLVLVDEFGKGTNTVDG 679
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
+ LL I +++ TC P V V T+ L+ LP+ +++ TM
Sbjct: 680 LALLAAVIRHWLALGPTC---PHVFVATNFLSLVQLQLLPRGPLVQYLTM------ETCE 730
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D +D+VF Y++ G A S+ H A AG+P ++I R V + ++ K ++
Sbjct: 731 DGDDLVFFYQVCEGVARASHASHTAAQAGLPEKLIARGKQVSDLIRSGKPIKPVKELLKE 790
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 791 KQMENCQTLVDKFLKLDLEDPSLDLDIFMSQEVLPA 826
>gi|426250532|ref|XP_004018989.1| PREDICTED: mutS protein homolog 5 [Ovis aries]
Length = 831
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 264/817 (32%), Positives = 417/817 (51%), Gaps = 66/817 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 47 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEIDPRSVVTSAKQDE 105
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 106 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTTTEKILFL 165
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 166 SSIIPFDCLLMVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTNLVSIDQD 222
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 223 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELN 282
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 283 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 340
Query: 296 LHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L LR+ R L + + + A + +L ++ L+ ++D S +
Sbjct: 341 L------------GLRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEGSLAEN 388
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 389 RFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGF 442
Query: 412 LMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
L+ I + +T+ +++G +F F ++L Y + +T+ELD LLGD++ I D E
Sbjct: 443 LLSIPRLPSMVETSDFEIEGLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRDQE 498
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNG 529
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNG
Sbjct: 499 TLLMHQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQLLGVRIQNG 558
Query: 530 RHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
RH L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+
Sbjct: 559 RHPLMELCARTFVPNSAECGRDIGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAE 618
Query: 589 AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G D+ + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T D
Sbjct: 619 EAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATERSLVLVDEFGKGTNTVD 678
Query: 641 GIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ LL I +++ TC P V V T+ L++ LP+ +++ TM
Sbjct: 679 GLALLAAVIRHWLALGPTC---PHVFVATNFLSLVHLQLLPQGPLVQYLTM------ETC 729
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D +D+VF Y++ G A S+ H A AG+P ++I R V + ++ K ++
Sbjct: 730 EDGDDLVFFYQVCEGVARASHASHTATQAGLPEKLIARGKQVSDLIRSGKPIKPVQELLK 789
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 790 EKQMENCQTLVDKFLKLDLEDPSLDLDIFMSQEVLPA 826
>gi|330803798|ref|XP_003289889.1| hypothetical protein DICPUDRAFT_88710 [Dictyostelium purpureum]
gi|325080000|gb|EGC33574.1| hypothetical protein DICPUDRAFT_88710 [Dictyostelium purpureum]
Length = 846
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 246/831 (29%), Positives = 430/831 (51%), Gaps = 77/831 (9%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++ ++ ++G++YY+ +++ + WED N F + ++K Q P++I ++
Sbjct: 42 EIILSVFYQDLKIGIAYYNRLESNIYLCQSWEDDN--FSCLHLIKQQTNPKVIIIPSRMP 99
Query: 62 ESFLSALKRSDG--------TTEAPTVKLV------KSSIFSYEQAWHRLIYLRVTGMDD 107
+ F+ +++R+ + E +LV + S F+YE + +RL+ ++++ +
Sbjct: 100 QRFVDSIQRNSNCFGPENINSDEEKKNELVTDFYFARFSDFTYESSKNRLLNIKLSTCNS 159
Query: 108 GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV 167
S+ ++ +L +++D + +RA GGLL+ L ++D + E+ + I+ + +
Sbjct: 160 NNSLV-KLKFLQNIIDFDNIEMIRAIGGLLSYLSKHVLLDEFDSLEN----LLINEICPI 214
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
L+++L L+ +LQIF HPS G +KEG S+F + +K T MG++LL+ WF+
Sbjct: 215 PLDQYLLLENNDLYSLQIFSNKNHPSFYSKGNSKEGLSLFALFDKTKTSMGKKLLKTWFM 274
Query: 228 RPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP + + R + I +F E + + L + LK +KD+ I+ + I+++ +
Sbjct: 275 RPSRNRNIIEERQSLIEYFSLQENQSIKSELQDYLKNIKDLRIIINR------IFSSQNP 328
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
SI H F V I + + L F ++ EL +Y+ I
Sbjct: 329 LKDFISIYKTFH----FFVKIKLLINSKNPTLPF--LKNVKDLYPNELVNIYQKFENIFC 382
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--I 403
++ ++EGF D+LD LR +Y + + L + E V+L ++ +V +
Sbjct: 383 FDQDDRVS----IKEGFNDKLDHLRNVYLSMDQILTQHGKQERVKLQNIS---WVSSFHL 435
Query: 404 VYIHQIGYLMCI-FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
VY Q+G L+CI + L + + +F F T L++ KT+ELD+ GDI
Sbjct: 436 VYYPQLGCLICIPVDNTLSISKQINIPTLKFTFK----TTNYLYFQNEKTKELDDFFGDI 491
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE- 521
++ ILD+ I RD + I ++ +NF+++LDC LSL+ + +RP ++ E
Sbjct: 492 HNDILDIHSKIERDFIDEIIANGKSIIDIINFSSQLDCVLSLSSAIKSYDLVRPTISSEV 551
Query: 522 PLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
++DI++GRH++QE D FIPNDT ++ I I++GPN SGKSIYIKQVALIVFL+ I
Sbjct: 552 QVIDIKDGRHLIQEQVTDNFIPNDTINHSNKPIIIVSGPNQSGKSIYIKQVALIVFLAQI 611
Query: 582 GSFVPADAATVGLTDSKHM--------TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA AT+ + D + + +SSFMID Q+ +M R +T++SL ++DE+G
Sbjct: 612 GSFVPASKATISIFDKIYTRITSRESNSVSESSFMIDCKQISLMTRFSTNKSLFIIDEYG 671
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS--ERLKFYTMSVLR 691
KGT DGI LL G I + ++ + K +CTH E K E++ F TM L
Sbjct: 672 KGTNPLDGISLLYGFIVFLLSKETTTKTFICTHFYEFFELLANSKELLEKVLFNTMDYLL 731
Query: 692 PENNST-------DVEDIVF-------LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
P NN ++E I + Y+L G + S+G+ CA AG+ +++I+RA
Sbjct: 732 PNNNQNNQHFQIDNLEKIFYKSNEFIPFYKLKEGVSNSSFGMICAKNAGISSDIIERAYE 791
Query: 738 VLEAAQNNKHVERWSHENI---SAQDQQYKNAVEKMLAFDVLKGDLRLFFQ 785
++E + K +E + I Q ++Y N ++ FD K +++ F
Sbjct: 792 IMEHQKQFKTIECSKFKPIPLNQNQIEKYNNLLDFFEQFDPNKDNIQHLFN 842
>gi|354492779|ref|XP_003508523.1| PREDICTED: mutS protein homolog 5 [Cricetulus griseus]
Length = 828
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 415/815 (50%), Gaps = 69/815 (8%)
Query: 7 CIL--HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
C+L GH +G++YYD+S +H + D S L+ V + PQ + TS K +E+
Sbjct: 47 CVLWSSGH-LGIAYYDTSDSTVHFMPDAPDHQS-LKLLQRVLDEVNPQSVITSAKQDEAM 104
Query: 65 LSALKR----SDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNS 120
L++ + P + L+ S F E + RL+ + + + ++ E+I +L+S
Sbjct: 105 TRFLRKLASQEHRQPKKPEIILLPSVDFGPETSKQRLLSGNYSFIPESMTATEKILFLSS 164
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
++ + VRA GGLL L R+ LE N S+ I + L + +D +
Sbjct: 165 IIPFDCVLTVRALGGLLKFLSRRRVGVELEDY---NVSVPILGFKKFVLTHLVSIDQDTY 221
Query: 181 EALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LNSR
Sbjct: 222 SVLQIFKSEAHPSVYKVASGLKEGLSLFGILNRCRCKWGQKLLRLWFTRPTQELRELNSR 281
Query: 240 LNAISFFLCSEEL--MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLH 297
L+ I FFL + L ++H L ++K++P ILK+ SDW K++ S L
Sbjct: 282 LDVIQFFLMPQNLDTAQTMHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSALG 339
Query: 298 VNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + SL + ++L DI ++ + +L ++ L+ ++D S + T+
Sbjct: 340 LRDV-----CRSLPQAIQLFQ-DIAQE----FSDDLHHIASLIGKVVDFEESLAENRFTV 389
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI 415
+ E+D ++ LP FL EVA EL L + +P ++YI IG+L+ I
Sbjct: 390 L-PNIDPEIDSKKRRLTGLPSFLTEVAQKELDNL-----DARIPSCSVIYIPLIGFLLSI 443
Query: 416 ----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
F + D +E G EF F D +L Y + +T+ELD LLGD++ +I D E
Sbjct: 444 PRLPFMVEASDFEIE---GLEFMFLSED----KLHYRSTRTKELDTLLGDLHCEIRDQET 496
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL---DIQN 528
+ L + + L + ++ A+ LD L+LA A Y RP P + I+N
Sbjct: 497 LLMYQLQCQVLARASVLTRVLDLASRLDVLLALASAARDYGYTRP--RYSPRIHGVRIKN 554
Query: 529 GRHVLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
GRH L E+ TF+PN T N GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA
Sbjct: 555 GRHPLMELCARTFVPNSTDCGSNQGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPA 614
Query: 588 DAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+ A +G+ D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T
Sbjct: 615 EEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEQSLVLIDEFGKGTNTV 674
Query: 640 DGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ LL + +++ P + V T+ L+ LP+ +++ TM D
Sbjct: 675 DGLALLAAVLRHWLALGPRCPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 728
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
+D+VF Y+L G A S+ + A AG+P ++I R V + + K + + +
Sbjct: 729 GDDLVFFYQLCQGVASASHASYTAAQAGLPEQLIARGKEVSDLMRRRKPIRPANELLRRS 788
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V K L D+ DL +F Q++LP+
Sbjct: 789 QVENCQALVHKFLKLDLEDPTLDLGIFMSQEVLPA 823
>gi|305855134|ref|NP_001182287.1| mutS protein homolog 5 [Sus scrofa]
gi|162138232|gb|ABX82820.1| mutS-like protein 5 [Sus scrofa]
Length = 835
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 265/812 (32%), Positives = 413/812 (50%), Gaps = 63/812 (7%)
Query: 7 CIL--HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEES- 63
C+L GH +G++YYD+ +H + D S L+ V + P + TS K +E+
Sbjct: 54 CVLWNSGH-LGIAYYDTGDSTIHFMPDAPDHES-LKLLQRVLDEINPLSVVTSAKQDENM 111
Query: 64 --FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNS 120
FL L D + P + + S F E + RL+ + + D ++ E+I +L+S
Sbjct: 112 TRFLGKLVSQDHRAPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFLSS 171
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
++ + VRA GGLL L RI LE N S+ I + L + +D +
Sbjct: 172 IIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTHLVSIDQDTY 228
Query: 181 EALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LNSR
Sbjct: 229 SVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELNSR 288
Query: 240 LNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLH 297
L+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S L
Sbjct: 289 LDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSAL- 345
Query: 298 VNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
LR+ R L + + ++ A + +L ++ L+ ++D S +
Sbjct: 346 -----------GLRDACRSLPQSIQLFQEIAHDFSDDLHHIASLIGKVVDFEGSLAENRF 394
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 395 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 448
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
CI + +T+ +++G +F F ++L Y + +T+ELD LLGD++ I D E
Sbjct: 449 CIPRLPSMVETSDFEIEGLDFMFL----SEEKLHYRSARTKELDTLLGDLHCDIRDQETL 504
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + L + I+NGRH
Sbjct: 505 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSARLLGVRIRNGRH 564
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 565 PLMELCARTFVPNSAECMGDTGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 624
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T DG+
Sbjct: 625 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATERSLVLIDEFGKGTNTVDGL 684
Query: 643 GLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
LL I +++ + P + V T+ L+ LP+ +++ TM D +D
Sbjct: 685 ALLAAVIRHWLALGPMCPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGDD 738
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
+VF Y++ G A S+ H A AG+P +I R V + ++ K ++ + Q +
Sbjct: 739 LVFFYQVCEGVANASHASHTAAQAGLPDRLIARGKEVSDLIRSGKPIKPVRELLKAKQME 798
Query: 762 QYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
+ V+K L D+ DL F Q++LP+
Sbjct: 799 NCQTLVDKFLKLDLEDPSLDLETFMSQEVLPA 830
>gi|351713153|gb|EHB16072.1| MutS protein-like protein 5 [Heterocephalus glaber]
Length = 814
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 266/812 (32%), Positives = 414/812 (50%), Gaps = 73/812 (8%)
Query: 11 GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEES---FLSA 67
GH +G++YYD+S +H + D S L+ V + P+ + TS K +E+ FL
Sbjct: 39 GH-LGIAYYDTSDSAIHFMPDAPDQES-LKLLQRVLDEINPRSLVTSAKQDENMTHFLGK 96
Query: 68 LKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGS 126
L + + P + L+ S F E + RL+ + + + ++ E+I +L+S++
Sbjct: 97 LASQEHREPKKPEIILLPSVDFGLEISKQRLLSGNYSFIPESMTATEKILFLSSIIPFNC 156
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
+ VRA GGLL L R+ LE N S+ I + L + +D + LQIF
Sbjct: 157 LLTVRALGGLLKFLGRRRVGVELEDY---NVSVPILGFKKFVLTHLVSIDQDTYSVLQIF 213
Query: 187 QTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
+++ HPS + KEG S+FG++N+C G +LLR WF RP DLE L+SRL+ I F
Sbjct: 214 KSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLEELSSRLDVIEF 273
Query: 246 FLCSEEL--MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
FL + L LH + ++K++P ILK+ SDW K++ S L +
Sbjct: 274 FLLPQNLDIAQMLHRLMSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSALGLRDA-- 329
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
SL + +RL DI ++ + +L ++ L+ ++D S + T V
Sbjct: 330 ---CRSLPQSIRLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNID 380
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI----FE 417
E+DE ++ LP FL EVA EL L + VP ++YI IG+L+ I F
Sbjct: 381 PEIDEKKRRLTGLPSFLTEVARKELENL-----DSRVPSCSVIYIPLIGFLLSIPRLPFM 435
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
+ D +E G +F F ++L Y + +T+ELD LLGD++ +I D E + L
Sbjct: 436 VEASDFEIE---GLDFMFL----SEEKLHYRSTRTKELDALLGDLHCEIRDQETLLMHQL 488
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD---IQNGRHVLQ 534
+ + L + ++ A+ LD L+LA A Y RP P L IQNGRH L
Sbjct: 489 QCQVLARAAVLARVLDLASRLDVLLALASAARDYGYSRPCYC--PRLHGVRIQNGRHPLM 546
Query: 535 EMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E+ TF+PN D GR+ IITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G
Sbjct: 547 ELCARTFVPNSAECSGDTGRVKIITGPNSSGKSIYLKQVGLITFMALVGSFVPAEQAEIG 606
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T DG+ LL
Sbjct: 607 AVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATKQSLVLIDEFGKGTNTLDGLSLL 666
Query: 646 GGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
I +++ TC P + V T+ L+ LP+ +++ TM + +D
Sbjct: 667 AAVIRHWLALGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEEGDD 717
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
+VF Y++ G A S+ H A AG+P +++ RA V + ++ K ++ Q +
Sbjct: 718 LVFFYQVCEGVACASHASHTATQAGLPDKLVARAKEVSDLVRSGKPIKPVKELQKQNQME 777
Query: 762 QYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
+ + V++ L D+ DL +F Q++LP+
Sbjct: 778 KCQILVDRFLQLDLEDPSLDLDIFMSQEVLPA 809
>gi|297290457|ref|XP_002803716.1| PREDICTED: mutS protein homolog 5-like isoform 2 [Macaca mulatta]
Length = 833
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 417/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWNSGYMGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 108 NMTRFLGKLASQEHRQPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 168 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 225 TYSVLQIFKSESHPSAYKVASGLKEGLSLFGILNRCRCKRGEKLLRLWFTRPTHDLGELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++
Sbjct: 285 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYGA 342
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 343 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 392
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 393 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 446
Query: 414 CIFEEK-LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 447 SIPRLPFMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 502
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 503 LMYQLQCQVLARAAVLTQVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 562
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 563 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 622
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 623 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 682
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 683 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 733
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 734 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPLKDLLKKN 793
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 828
>gi|397523146|ref|XP_003831602.1| PREDICTED: mutS protein homolog 5 isoform 2 [Pan paniscus]
Length = 834
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 418/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 683
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 684 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 734
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 794
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|410958770|ref|XP_003985987.1| PREDICTED: mutS protein homolog 5 [Felis catus]
Length = 833
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 264/816 (32%), Positives = 415/816 (50%), Gaps = 62/816 (7%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++Y+ + +G++YYD+S +H + D S L+ V + P+ + TS K +
Sbjct: 48 EIYLCALWTSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPRSVVTSAKQD 106
Query: 62 ES---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E+ FL L + + P + + S F E + RL+ + + D ++ E+I +
Sbjct: 107 ENMTRFLGKLASQEHREPKRPEIVFLPSVDFGLEISKQRLLAGNYSFIPDSMTTTEKILF 166
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 167 LSSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTHLVSIDQ 223
Query: 178 TAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP DL L
Sbjct: 224 DTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGQKLLRLWFTRPTHDLGEL 283
Query: 237 NSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
NSRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 284 NSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYS 341
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 342 ALGLRDA-----CRSLPQSIQLFQ-DIAQE----FSDDLYHIASLIGKVVDFEGSLAENR 391
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYL 412
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L
Sbjct: 392 FT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFL 445
Query: 413 MCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+CI F + D +E G +F F ++L Y + +T+ELD LLGD++ I D
Sbjct: 446 LCIPRLPFMVEASDFEIE---GLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRD 498
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQ 527
E + L + + L + ++ A+ LD L+LA A Y RP + + L + I
Sbjct: 499 QETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQLLGVRIL 558
Query: 528 NGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
NGRH L E+ TF+PN D GRI +ITGPN SGKSIY+KQV LI F++ +GSFVP
Sbjct: 559 NGRHPLMELCARTFVPNSAECGGDKGRIKVITGPNSSGKSIYLKQVGLITFMALVGSFVP 618
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A+ A +G D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T
Sbjct: 619 AEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATKQSLVLIDEFGKGTNT 678
Query: 639 EDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
DG+ LL + +++ + P + V T+ L+ LP+ +++ TM
Sbjct: 679 VDGLALLAAVLRHWLALGPMCPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCE 732
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D +D+VF Y++ G A S+ + A AG+P +I R V + ++ K ++
Sbjct: 733 DGDDLVFFYQVCEGIANASHASYTAAQAGLPGNLIARGKEVSDLIRSGKPIKPVKELLKE 792
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 793 KQMENCQTLVDKFLKLDLEDPSLDLDIFMSQEVLPA 828
>gi|4505253|ref|NP_002432.1| mutS protein homolog 5 isoform c [Homo sapiens]
gi|26638666|ref|NP_751898.1| mutS protein homolog 5 isoform c [Homo sapiens]
gi|3914060|sp|O43196.1|MSH5_HUMAN RecName: Full=MutS protein homolog 5; Short=hMSH5
gi|2653649|gb|AAB87632.1| MutS homolog [Homo sapiens]
gi|3108227|gb|AAC62534.1| MutS homolog 5 [Homo sapiens]
gi|3831703|gb|AAC70066.1| MutS homolog [Homo sapiens]
gi|3831715|gb|AAC70067.1| MutS homolog [Homo sapiens]
gi|4529899|gb|AAD21822.1| MutSH5 [Homo sapiens]
gi|15277273|dbj|BAB63375.1| MSH5 [Homo sapiens]
gi|119623917|gb|EAX03512.1| mutS homolog 5 (E. coli), isoform CRA_e [Homo sapiens]
gi|119623918|gb|EAX03513.1| mutS homolog 5 (E. coli), isoform CRA_e [Homo sapiens]
gi|119623921|gb|EAX03516.1| mutS homolog 5 (E. coli), isoform CRA_e [Homo sapiens]
gi|119623923|gb|EAX03518.1| mutS homolog 5 (E. coli), isoform CRA_e [Homo sapiens]
gi|261858892|dbj|BAI45968.1| mutS homolog 5 [synthetic construct]
Length = 834
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 418/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 683
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 684 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 734
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 794
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|402866466|ref|XP_003897403.1| PREDICTED: mutS protein homolog 5 isoform 1 [Papio anubis]
gi|402866468|ref|XP_003897404.1| PREDICTED: mutS protein homolog 5 isoform 2 [Papio anubis]
Length = 834
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 261/815 (32%), Positives = 417/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYMGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHRQPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 226 TYSVLQIFKSESHPSAYKVASGLKEGLSLFGILNRCRCKRGEKLLRLWFTRPTHDLGELN 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYGA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFEEK-LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPFMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTQVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 683
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 684 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 734
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 794
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 QMENCQTLVDKFMKLDLEDPNLDLNIFMSQEVLPA 829
>gi|338718605|ref|XP_001491489.3| PREDICTED: mutS protein homolog 5 [Equus caballus]
Length = 830
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 263/815 (32%), Positives = 415/815 (50%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 46 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPRTVVTSAKQDE 104
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
S FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 105 SMTRFLGKLASQEHREPKRPELIFLPSVDFGLEISKQRLLSGNYSFIPDSMTTTEKILFL 164
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 165 SSIIPFDCLLTVRALGGLLKFLGRRRIGGELEDY---NVSVPILGFKKFVLTHLVSIDQD 221
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 222 TYGVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFRRPTQDLGELN 281
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 282 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 339
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 340 LGLRDA-----CRSLPQSIQLFQ-DISQE----FSDDLHHIASLIGKVVDFEGSLAENRF 389
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 390 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 443
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + +++G +F F ++L Y + +T+ELD LLGD++ I D E
Sbjct: 444 SIPRLPSMVEASDFEIEGLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRDQETL 499
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + L + IQNGRH
Sbjct: 500 LMYQLQCQVLARATVLTRVLDLASRLDVLLALASAARDYGYSRPCYSPRLLGVRIQNGRH 559
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 560 PLMELCARTFVPNSAECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 619
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T DG+
Sbjct: 620 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEQSLVLIDEFGKGTNTVDGL 679
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 680 ALLAAVLRHWLALGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 730
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P ++I R V + ++ K ++
Sbjct: 731 GNDLVFFYQVCEGVANASHASHTAAQAGLPDKLIARGKEVSDLIRSGKSIKPVKELLKEK 790
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 791 QMENCQILVDKFLKLDLEDPNLDLDIFMSQEVLPA 825
>gi|329664722|ref|NP_001192428.1| mutS protein homolog 5 [Bos taurus]
gi|296474322|tpg|DAA16437.1| TPA: mutS homolog 5 [Bos taurus]
Length = 832
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 265/817 (32%), Positives = 420/817 (51%), Gaps = 65/817 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 47 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEIDPRSVVTSAKQDE 105
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 106 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFLPDSMTTTEKILFL 165
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 166 SSIIPFDCLLMVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTNLVSIDQD 222
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 223 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELN 282
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSICS 294
SRL+ I FFL + L MA LH L ++K++P ILK+ + +T SDW K++ S
Sbjct: 283 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRM---TLSHTKVSDWQVLYKTVYS 339
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 340 ALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENR 389
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYL 412
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L
Sbjct: 390 FT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFL 443
Query: 413 MCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + +T+ +++G +F F ++L Y + +T+ELD LLGD++ I D E
Sbjct: 444 LSIPRLPSMVETSDFEIEGLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRDQET 499
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGR 530
+ L + + L + ++ A+ LD L+LA A Y RP + L + IQNGR
Sbjct: 500 LLMHQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPRLLGVRIQNGR 559
Query: 531 HVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
H L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+
Sbjct: 560 HPLMELCARTFVPNSAECGGDAGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEE 619
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G D+ + ++ S+FMIDL+ QV + AT +SL L+DEFGKGT T D
Sbjct: 620 AEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATERSLVLVDEFGKGTNTVD 679
Query: 641 GIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ LL I +++ TC P V V T+ L+ LP+ +++ TM
Sbjct: 680 GLALLAAVIRHWLALGPTC---PHVFVATNFLSLVQLQLLPRGPLVQYLTM------ETC 730
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D +D+VF Y++ G A S+ H A AG+P ++I R V + ++ K ++
Sbjct: 731 EDGDDLVFFYQVCEGVARASHASHTAAQAGLPEKLIARGKQVSDLIRSGKPIKPVKELLK 790
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 791 EKQMENCQTLVDKFLKLDLEDPSLDLDIFMSQEVLPA 827
>gi|432908565|ref|XP_004077924.1| PREDICTED: mutS protein homolog 5-like [Oryzias latipes]
Length = 817
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 254/786 (32%), Positives = 402/786 (51%), Gaps = 61/786 (7%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK 69
HG +VG+ +YDS LH + V N D L+ V + P +I TS K E L+
Sbjct: 41 HG-QVGLCFYDSGDSSLHYM-VDTPDNYDLHLLARVIREISPHVIITSAKMEHCMTRFLQ 98
Query: 70 RSDGTTE-APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEV 128
P V F E RL+ + + ++ ++R+ YL+S + S +
Sbjct: 99 HLASIPHYKPEVVTYPYVDFGLEVGKQRLLSAHLPLLPASITERDRMSYLSSCITFDSPL 158
Query: 129 QVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
+RA G LL L+ R+ LE G + I +L + +D+ + LQIF++
Sbjct: 159 MLRAVGALLKCLDRRRVGVELEDSSVG---VPILQFHAYTLKGGVYIDSDTYSVLQIFKS 215
Query: 189 DKHPS----HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
D HPS H G KEG S++G+MN+C G +LLR WFLRP DL L R I
Sbjct: 216 DMHPSVYKLHSG---EKEGLSLYGIMNRCRCKFGAKLLRQWFLRPTQDLAVLCRRQEVIR 272
Query: 245 FFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
FF + +++++L L+ +++IP +L++ + + T DW + K++ S++ V
Sbjct: 273 FFTSPQNSDVLSTLQSLLRNIRNIPSLLRRMSLANTKVT--DWQSLYKTVYSVVCV---- 326
Query: 303 EVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
R+ +R L + + + + +L+Y+ L+ I+D + ++ T V+
Sbjct: 327 --------RDSVRHLPQSIGVFRDISGGFSDDLSYITALIGRIVDFEATVQENRFT-VKP 377
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--FEE 418
+DE ++ L +FL +VA EL HL + C++YI IG+L+ +
Sbjct: 378 NVDPAIDEKKRRMAGLSDFLTDVARREL---EHLDPRVPSCCVIYIPLIGFLLSLPRLPS 434
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
++ E ++G EF F D RL Y + +TRELD LLGD++ I DME A+ L
Sbjct: 435 MVEKEDFE-MEGLEFMFLSED----RLHYRSQRTRELDELLGDMHCDIRDMETAVMTQLQ 489
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
+ I S L + ++ AELDC ++++ + + +Y P L + I GRH L E+
Sbjct: 490 NAILERSPSLYQVLDLIAELDCLMAMSSASQEYSYTSPKLASHKKITITQGRHPLLELCS 549
Query: 539 DTFIPNDTR-IDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS 597
F+ N + D +GR+ IITGPN SGKSIY+KQV LIVF++ IGS VPA A +GL D
Sbjct: 550 PVFVANSFQSFDKEGRVKIITGPNSSGKSIYLKQVGLIVFMALIGSDVPAKEAEIGLVDG 609
Query: 598 KHMTAEQ--------SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ + S+FMIDL+Q+ L +T SL L+DEFGKGT + DG+ LL ++
Sbjct: 610 IYTRMQSRESVSVGLSTFMIDLNQMAQALNSSTGNSLLLIDEFGKGTNSVDGLSLLAASV 669
Query: 650 NYFV---TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+++ DV P +L+ T+ LL G LP S + F T+ + D +++VFLY
Sbjct: 670 CHWLRKAPVDV-PHILLSTNFHSLLQLGLLPASRMVSFLTL------ETAVDGDELVFLY 722
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
+L G SY + A LAG+PA ++ RA V E + K ++R + ++++ K
Sbjct: 723 QLREGICQSSYAANIASLAGLPARLVHRAVEVSEHYRTGKPIKRTQGASSDEKEKRCKIM 782
Query: 767 VEKMLA 772
VEK L+
Sbjct: 783 VEKFLS 788
>gi|114606471|ref|XP_001158290.1| PREDICTED: mutS protein homolog 5 isoform 3 [Pan troglodytes]
Length = 834
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 260/815 (31%), Positives = 417/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYGA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 683
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 684 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 734
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 794
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|395533878|ref|XP_003768976.1| PREDICTED: mutS protein homolog 5 [Sarcophilus harrisii]
Length = 824
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 264/820 (32%), Positives = 421/820 (51%), Gaps = 72/820 (8%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
+ Y+ + H R+G++YYDS+ ++ L D + L+ V + P+ I TS K +
Sbjct: 41 ETYLCVLWHSGRLGLAYYDSADSTIYFLPDTPDCDH-LKLLRRVVDEINPRSIITSAKQD 99
Query: 62 ES---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E+ FL L + +P L+ F E + R++ + + + L+ E+I +
Sbjct: 100 ENMARFLGGLVSPEHKELGSPETVLLPRVDFGLEISKQRILSGNFSFIPESLTYTEKILF 159
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S++ + ++A GGLL L R+ LE G+ ++ I + L + +D
Sbjct: 160 LSSIIPFDCPLMIQALGGLLKFLNRRRVSVELE---DGSVNVPILGFKKFVLTHLVSIDQ 216
Query: 178 TAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ LQIF+++ HPS + KEG S+FG++N+C + G +LLR W +RP DLE L
Sbjct: 217 DTYSVLQIFKSETHPSVYKVTSGLKEGLSLFGILNRCRSKRGEKLLRLWLMRPTQDLEEL 276
Query: 237 NSRLNAISFFLC--SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
NSRL+ I FFL ++E+ +LH L ++K++P ILK+ SDW +++ S
Sbjct: 277 NSRLDVIQFFLLPQNQEMALTLHRLLSHIKNVPLILKRMLLSQ--TKVSDWKILYETVYS 334
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + +L DI ++ + +L ++ L+ ++D S +
Sbjct: 335 ALGLRDT-----CRSLPQSTQLFR-DIAQE----FSDDLCHIACLINKVVDFEGSIAENR 384
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP--CIVYIHQIGYL 412
T VR +LDE ++ LP FL EVA EL L + +P C++YI IG+L
Sbjct: 385 FT-VRPNIDPDLDEKKRRLMGLPSFLTEVARKELETL-----DSRIPSCCVLYIPLIGFL 438
Query: 413 MCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ I +D + E + G +F F ++L Y + +T+ELD++LGD++ +I D E
Sbjct: 439 LSIPRLPFMVDRSDFE-IVGLDFMFL----SEEKLHYRSSRTKELDSILGDLHCEIRDGE 493
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE-PLLDIQNG 529
+ L + L + ++ A+ LD L+LA A Y RP + + P + IQ+G
Sbjct: 494 TLLMYQLQCQVLSRGAMLNRVIDLASRLDVLLALAGAARDYGYSRPQYSSKIPGVRIQDG 553
Query: 530 RHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
RH L E+ TF+PN D GRI IITGPN SGKSIY+KQ+ LI F++ +GSFVPA
Sbjct: 554 RHPLMELCSHTFVPNSAESGGDRGRIKIITGPNSSGKSIYLKQIGLITFMALVGSFVPAG 613
Query: 589 AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A VG D+ + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T D
Sbjct: 614 KAEVGAVDAIFTRIHNFESVSLGLSTFMIDLNQVAKAVNNATERSLVLIDEFGKGTNTVD 673
Query: 641 GIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ LL + ++V C P++ V T+ L+ P +++ TM R
Sbjct: 674 GLALLASVLRHWVYQGPNC---PQIFVATNFVNLIQ--LQPPGSLVEYLTMETCR----- 723
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D D++FLY++ G A S+ H A AG+PA++I R V E Q K ++ +
Sbjct: 724 -DGNDLIFLYQVREGVANASHASHTAAQAGLPAKLITRGLEVSELIQKGKPIK---PDKG 779
Query: 757 SAQDQQYKNA---VEKMLAFDVLKGDLRL---FFQDLLPS 790
+D Q +N V+K L D+ +L L Q +LP+
Sbjct: 780 LLKDNQIENCQALVDKFLKLDLEDPELDLSNFMIQQVLPT 819
>gi|348576045|ref|XP_003473798.1| PREDICTED: mutS protein homolog 5-like [Cavia porcellus]
Length = 837
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 265/820 (32%), Positives = 416/820 (50%), Gaps = 72/820 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G +G++YYD+S ++ + D S L+ V + PQ I T+ K +E
Sbjct: 53 IHLCALWNGGHLGIAYYDTSDSTIYFMPDAPDHES-LMLLQRVLDEINPQSIVTTAKQDE 111
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
S FL L + ++ P + L+ S F E + RL+ + + + ++ E+I +L
Sbjct: 112 SMTHFLGKLASQEHRASKKPEIILLPSVDFGLEISKQRLLSGNYSFIPESMTATEKILFL 171
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + +RA GGL L RI LE N S+ I + L + +D
Sbjct: 172 SSIIPFDCLLTIRALGGLFKFLGRRRIGVELEDY---NISVPILGFKKFVLTHLVSIDQD 228
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DLE LN
Sbjct: 229 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTRDLEELN 288
Query: 238 SRLNAISFFLCSEEL--MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L +LH + ++K++P ILK+ SDW K++ S
Sbjct: 289 SRLDVIQFFLLPQNLDIAQTLHRLMSHIKNVPMILKRMKLSH--TKVSDWHILYKTVYSA 346
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 347 LGLRD-----ACRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 396
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP--CIVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 397 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARTELENL-----DSRIPSCSVIYIPLIGFLL 450
Query: 414 CI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
I F + +D +E G +F F ++L Y + +T+ELD LLGD++ +I D
Sbjct: 451 SIPRLPFMVEANDFEIE---GLDFMFL----SEEKLHYRSTRTKELDALLGDLHCEIRDQ 503
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD---I 526
E + L + + L + ++ A+ LD L+LA A Y RP P L I
Sbjct: 504 ETLLMHQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPHYC--PGLHGVRI 561
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+NGRH L E+ TF+PN D G++ +ITGPN SGKSI++KQV LI F++ +GSFV
Sbjct: 562 RNGRHPLMELCARTFVPNSAECGGDKGKVKVITGPNSSGKSIFLKQVGLIAFMALVGSFV 621
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA+ A +G+ D+ ++ S+FMIDL+Q+ + AT QSL L+DEFGKGT
Sbjct: 622 PAEEADIGVIDAIFTRIHSCDSISLGLSTFMIDLNQMAKAVNNATEQSLVLIDEFGKGTN 681
Query: 638 TEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
+ DG+ LL I +++ V P + V T+ L+ LP+ +++ TM
Sbjct: 682 SVDGLALLAAVIRHWLALGPVCPHIFVATNFLSLVQLQLLPQGPLVQYLTMETFE----- 736
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQNNKHVERWSH 753
D +D+VF Y++ G A S+ H A AG+P +I RA V + + + K VE
Sbjct: 737 -DGDDLVFFYQVCEGVASASHASHTAAQAGLPDSLIARAKEVSDLIHSGKPIKPVEELWR 795
Query: 754 ENISAQDQQYKNAVEKMLAFDVLKGDLRL---FFQDLLPS 790
EN A Q VEK L D+ L L Q++LP+
Sbjct: 796 ENRMANCQAL---VEKFLKLDLEDPSLDLDTFMSQEVLPA 832
>gi|441594121|ref|XP_003272166.2| PREDICTED: LOW QUALITY PROTEIN: mutS protein homolog 5 isoform 2
[Nomascus leucogenys]
Length = 835
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 260/815 (31%), Positives = 417/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 51 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDYES-LKLLQRVLDEINPQSVVTSAKQDE 109
Query: 63 SFLSAL-KRSDGTTEAPTVKLV--KSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
+ L K + G A +++ S F E + RL+ + + D ++ E+I +L+
Sbjct: 110 NMTRFLGKLAPGAQRAXKTEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFLS 169
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 170 SIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQDT 226
Query: 180 HEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LNS
Sbjct: 227 YSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELNS 286
Query: 239 RLNAISFFLCSEELMAS--LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
RL+ I FFL + L + LH L ++K++P ILK+ SDW K++ S L
Sbjct: 287 RLDVIQFFLLPQNLDVAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSAL 344
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ SL + ++L DI ++ + +L ++ L+ ++D S + T
Sbjct: 345 GLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRFT 394
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMC 414
V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 395 -VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLS 448
Query: 415 IFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E +
Sbjct: 449 IPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLL 504
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHV 532
L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 505 MYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRHP 564
Query: 533 LQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT 591
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 565 LMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAE 624
Query: 592 VGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 625 IGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 684
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 685 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPRGPLVQYLTM------ETCED 735
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 736 GNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 795
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 796 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 830
>gi|395832567|ref|XP_003789334.1| PREDICTED: LOW QUALITY PROTEIN: mutS protein homolog 5 [Otolemur
garnettii]
Length = 849
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 266/833 (31%), Positives = 420/833 (50%), Gaps = 79/833 (9%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
Q+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +
Sbjct: 47 QIHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVMDEINPQSLVTSAKQD 105
Query: 62 ES---FLSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E FL L + D + P + + S F E + RL+ + + D ++ E+I +
Sbjct: 106 EDMTRFLGKLASQEDREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILF 165
Query: 118 LNSMMDMGSEV-----------------QVRASGGLLAVLENERIVDTLEQKESGNASIT 160
L+S++ + QVRA GGLL L RI LE N S+
Sbjct: 166 LSSIIPFDCLLTPPGXLKLTPTSLLILFQVRALGGLLKFLSRRRIGVELEDY---NVSVP 222
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGR 219
I + L + +D + LQIF+++ HPS + KEG S+FG++N+C + G
Sbjct: 223 ILGFKKFVLTHLVSIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHSRWGE 282
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPS 277
+LLR WF RP DL LNSRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 283 KLLRLWFTRPTQDLGELNSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH 342
Query: 278 FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 343 --TKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 390
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 391 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLIGLPSFLTEVARKELENL-----D 444
Query: 398 MFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + +++G +F F ++L Y + +T+E
Sbjct: 445 SRIPSCSVIYIPLIGFLLSIPRLPSMVEAPDFEIEGLDFMFL----SEEKLHYRSGRTKE 500
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 501 LDALLGDLHCEIRDQETLLMYQLQCQVLARATVLTRVLDLASRLDVLLALASAARDYGYS 560
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN D GRI +ITGPN SGKSIY+KQV
Sbjct: 561 RPRYSPQLLGVRIQNGRHPLMELCARTFVPNSAECSGDKGRIKVITGPNSSGKSIYLKQV 620
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G ++ + ++ S+FMIDL+QV + AT+Q
Sbjct: 621 GLITFMALVGSFVPAEEAEIGTVNAIFTQIHSCESISLGLSTFMIDLNQVAKAVNNATAQ 680
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 681 SLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPTC---PYIFVATNFLSLVQLQLLPQGP 737
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+++ TM D D+VF Y++ G A S+ + A AG+P +I R VL+
Sbjct: 738 LVQYLTM------ETCEDGNDLVFFYQVCEGVANASHASYTAAQAGLPDRLIARGKEVLD 791
Query: 741 AAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
++ K ++ Q + + V+K L D+ DL +F Q++LP+
Sbjct: 792 LIRSGKPIKPVKELLKEKQIENCQRLVDKFLKLDLEDSNLDLDIFMRQEVLPA 844
>gi|109070447|ref|XP_001105745.1| PREDICTED: mutS protein homolog 5-like isoform 1 [Macaca mulatta]
Length = 834
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 417/819 (50%), Gaps = 69/819 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWNSGYMGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 108 NMTRFLGKLASQEHRQPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 168 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 225 TYSVLQIFKSESHPSAYKVASGLKEGLSLFGILNRCRCKRGEKLLRLWFTRPTHDLGELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++
Sbjct: 285 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYGA 342
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 343 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 392
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 393 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 446
Query: 414 CI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
I F + D ++ G +F F ++L Y + +T+ELD LLGD++ +I D
Sbjct: 447 SIPRLPFMVEASDF---EINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQ 499
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQN 528
E + L + + L + ++ A+ LD L+LA A Y RP + + L + IQN
Sbjct: 500 ETLLMYQLQCQVLARAAVLTQVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQN 559
Query: 529 GRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
GRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA
Sbjct: 560 GRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPA 619
Query: 588 DAATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLT 638
+ A +G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T
Sbjct: 620 EEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNT 679
Query: 639 EDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
DG+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 680 VDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------E 730
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 731 TCEDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPLKDL 790
Query: 755 NISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 791 LKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|81906991|sp|Q9QUM7.1|MSH5_MOUSE RecName: Full=MutS protein homolog 5
gi|6409195|gb|AAF07881.1|AF146227_1 MutS homolog 5 [Mus musculus]
gi|5814105|gb|AAD52102.1| MSH5 [Mus musculus]
gi|148694740|gb|EDL26687.1| mutS homolog 5 (E. coli), isoform CRA_a [Mus musculus]
gi|148694741|gb|EDL26688.1| mutS homolog 5 (E. coli), isoform CRA_a [Mus musculus]
Length = 833
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 412/819 (50%), Gaps = 70/819 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWSSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + L+ S F E + RL+ + + D ++ E+I +L
Sbjct: 108 AMTRFLGKLASEEHREPKGPEIILLPSVDFGPEISKQRLLSGNYSFISDSMTATEKILFL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE + G + I + L + +D
Sbjct: 168 SSIIPFDCVLTVRALGGLLKFLSRRRIGVELEDYDVG---VPILGFKKFVLTHLVSIDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LN
Sbjct: 225 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGQKLLRLWFTRPTRELRELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 285 SRLDVIQFFLMPQNLDMAQMLHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 342
Query: 296 LHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L LR+ R L + + + A + +L ++ L+ ++D S +
Sbjct: 343 L------------GLRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEESLAEN 390
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V ++D ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 391 RFT-VLPNIDPDIDAKKRRLIGLPSFLTEVAQKELENL-----DSRIPSCSVIYIPLIGF 444
Query: 412 LMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
L+ I F + D +E G +F F D +L Y + +T+ELD LLGD++ +I
Sbjct: 445 LLSIPRLPFMVEASDFEIE---GLDFMFLSED----KLHYRSARTKELDTLLGDLHCEIR 497
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD-- 525
D E + L + + L + ++ A+ LD L+LA A Y RP P +
Sbjct: 498 DQETLLMYQLQCQVLARASVLTRVLDLASRLDVLLALASAARDYGYSRP--HYSPCIHGV 555
Query: 526 -IQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
I+NGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GS
Sbjct: 556 RIRNGRHPLMELCARTFVPNSTDCGGDQGRVKVITGPNSSGKSIYLKQVGLITFMALVGS 615
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA+ A +G+ D+ + ++ S+FMIDL+QV + AT SL L+DEFGKG
Sbjct: 616 FVPAEEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKG 675
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T + DG+ LL + +++ P V V T+ L+ LP+ +++ TM
Sbjct: 676 TNSVDGLALLAAVLRHWLALGPSCPHVFVATNFLSLVQLQLLPQGPLVQYLTM------E 729
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D ED+VF Y+L G A S+ H A AG+P +I R V + ++ K ++ +
Sbjct: 730 TCEDGEDLVFFYQLCQGVASASHASHTAAQAGLPDPLIARGKEVSDLIRSGKPIKATNEL 789
Query: 755 NISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 790 LRRNQMENCQALVDKFLKLDLEDPTLDLDIFISQEVLPA 828
>gi|3108220|gb|AAC62533.1| MutS homolog 5 [Homo sapiens]
Length = 834
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 260/815 (31%), Positives = 417/815 (51%), Gaps = 62/815 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGL 683
Query: 643 GLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
LL + +++ TC P + V T+ L+ LP+ +++ TM D
Sbjct: 684 ALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCED 734
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+VF Y++ G A S+ H A AG+ +++ R V + ++ K ++
Sbjct: 735 GNDLVFFYQVCEGVAKASHASHTAAQAGLLDKLVARGKEVSDLIRSGKPIKPVKDLLKKN 794
Query: 759 QDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 QMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|397523144|ref|XP_003831601.1| PREDICTED: mutS protein homolog 5 isoform 1 [Pan paniscus]
Length = 835
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 261/816 (31%), Positives = 418/816 (51%), Gaps = 63/816 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
+G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T DG
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVDG 683
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 684 LALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCE 734
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 DGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKK 794
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 NQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 830
>gi|187954721|gb|AAI41114.1| MutS homolog 5 (E. coli) [Mus musculus]
Length = 833
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 263/819 (32%), Positives = 412/819 (50%), Gaps = 70/819 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWSSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + L+ S F E + RL+ + + D ++ E+I +L
Sbjct: 108 AMTRFLGKLASEEHREPKGPEIILLPSVDFGPEISKQRLLSGNYSFISDSMTATEKILFL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE + G + I + L + +D
Sbjct: 168 SSIIPFDCVLTVRALGGLLKFLSRRRIGVELEDYDVG---VPILGFKKFVLTHLVSIDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LN
Sbjct: 225 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGQKLLRLWFTRPTRELRELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 285 SRLDVIQFFLMPQNLDMAQMLHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 342
Query: 296 LHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L LR+ R L + + + A + +L ++ L+ ++D S +
Sbjct: 343 L------------GLRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEESLAEN 390
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V ++D ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 391 RFT-VLPNIDPDIDAKKRRLIGLPSFLTEVAQKELENL-----DSRIPSCSVIYIPLIGF 444
Query: 412 LMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
L+ I F + D +E G +F F D +L Y + +T+ELD LLGD++ +I
Sbjct: 445 LLSIPRLPFMVEASDFEIE---GLDFMFLSED----KLHYRSARTKELDTLLGDLHCEIR 497
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD-- 525
D E + L + + L + ++ A+ LD L+LA A Y RP P +
Sbjct: 498 DQETLLMYQLQCQVLARASVLTRVLDLASRLDVLLALASAARDYGYSRP--HYSPCIHGV 555
Query: 526 -IQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
I+NGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GS
Sbjct: 556 RIRNGRHPLVELCARTFVPNSTDCGGDQGRVKVITGPNSSGKSIYLKQVGLITFMALVGS 615
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA+ A +G+ D+ + ++ S+FMIDL+QV + AT SL L+DEFGKG
Sbjct: 616 FVPAEEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKG 675
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T + DG+ LL + +++ P V V T+ L+ LP+ +++ TM
Sbjct: 676 TNSVDGLALLAAVLRHWLALGPSCPHVFVATNFLSLVQLQLLPQGPLVQYLTM------E 729
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D ED+VF Y+L G A S+ H A AG+P +I R V + ++ K ++ +
Sbjct: 730 TCEDGEDLVFFYQLCQGVASASHASHTAAQAGLPDPLIARGKEVSDLIRSGKPIKATNEL 789
Query: 755 NISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 790 LRRNQMENCQALVDKFLKLDLEDPTLDLDIFISQEVLPA 828
>gi|30584843|gb|AAP36674.1| Homo sapiens mutS homolog 5 (E. coli) [synthetic construct]
gi|61371683|gb|AAX43712.1| mutS-like 5 [synthetic construct]
Length = 836
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 261/816 (31%), Positives = 418/816 (51%), Gaps = 63/816 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
+G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T DG
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVDG 683
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 684 LALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCE 734
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 DGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKK 794
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 NQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 830
>gi|26638664|ref|NP_751897.1| mutS protein homolog 5 isoform b [Homo sapiens]
gi|12655021|gb|AAH01358.1| MutS homolog 5 (E. coli) [Homo sapiens]
gi|12803359|gb|AAH02498.1| MutS homolog 5 (E. coli) [Homo sapiens]
gi|30583239|gb|AAP35864.1| mutS homolog 5 (E. coli) [Homo sapiens]
gi|60655045|gb|AAX32086.1| mutS-like 5 [synthetic construct]
gi|119623919|gb|EAX03514.1| mutS homolog 5 (E. coli), isoform CRA_f [Homo sapiens]
gi|119623920|gb|EAX03515.1| mutS homolog 5 (E. coli), isoform CRA_f [Homo sapiens]
Length = 835
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 261/816 (31%), Positives = 418/816 (51%), Gaps = 63/816 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 448 SIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETL 503
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 504 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 563
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A
Sbjct: 564 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEA 623
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
+G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T DG
Sbjct: 624 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVDG 683
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 684 LALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCE 734
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 735 DGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKK 794
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 795 NQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 830
>gi|219362931|ref|NP_001136934.1| uncharacterized protein LOC100217093 [Zea mays]
gi|194697678|gb|ACF82923.1| unknown [Zea mays]
Length = 256
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/246 (71%), Positives = 198/246 (80%), Gaps = 8/246 (3%)
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
MERAI RDLV + F L KAVNFAAELDC LSLA VAHQNNY+RPILT + +L+I N
Sbjct: 1 MERAIIRDLVCRVLQFIPQLTKAVNFAAELDCILSLATVAHQNNYVRPILTEDSILEIHN 60
Query: 529 GRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
GRH LQEMTVDTFIPNDT+I + GRINIITGPNYSGKSIYIKQVALIVFL+HIGSFVPAD
Sbjct: 61 GRHALQEMTVDTFIPNDTKIRDAGRINIITGPNYSGKSIYIKQVALIVFLAHIGSFVPAD 120
Query: 589 AATVGLTD-------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
+A VGLTD SK MT EQS+FMIDLHQVG MLR ATS+SLCLLDEFGKGTLTEDG
Sbjct: 121 SAIVGLTDRIFCAMGSKSMTTEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTEDG 180
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
IGLLGGTI++F PPKVL+ THLTE+ E LP+ E +K Y MSVL P+ +++ ED
Sbjct: 181 IGLLGGTISHFANYGSPPKVLLSTHLTEIFTENYLPQCEHIKCYAMSVLNPDGQTSN-ED 239
Query: 702 IVFLYR 707
I FLYR
Sbjct: 240 ITFLYR 245
>gi|226246613|ref|NP_038628.2| mutS protein homolog 5 [Mus musculus]
gi|226246616|ref|NP_001139687.1| mutS protein homolog 5 [Mus musculus]
gi|16118498|gb|AAL14454.1|AF397035_8 DNA mismatch repair protein Msh5 [Mus musculus]
gi|16118507|gb|AAL14462.1|AF397036_8 DNA mismatch repair protein Msh5 [Mus musculus]
gi|3986757|gb|AAC84154.1| MutS homolog [Mus musculus]
Length = 833
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 262/819 (31%), Positives = 411/819 (50%), Gaps = 70/819 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWSSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + L+ S F E + RL+ + + D ++ E+I +L
Sbjct: 108 AMTRFLGKLASEEHREPKGPEIILLPSVDFGPEISKQRLLSGNYSFISDSMTATEKILFL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE + G + I + L + +D
Sbjct: 168 SSIIPFDCVLTVRALGGLLKFLSRRRIGVELEDYDVG---VPILGFKKFVLTHLVSIDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LN
Sbjct: 225 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGQKLLRLWFTRPTRELRELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 285 SRLDVIQFFLMPQNLDMAQMLHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 342
Query: 296 LHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L LR+ R L + + + A + +L ++ L+ ++D S +
Sbjct: 343 L------------GLRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEESLAEN 390
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V ++D ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 391 RFT-VLPNIDPDIDAKKRRLIGLPSFLTEVAQKELENL-----DSRIPSCSVIYIPLIGF 444
Query: 412 LMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
L+ I F + D +E G +F F D +L Y + +T+ELD LLGD++ +I
Sbjct: 445 LLSIPRLPFMVEASDFEIE---GLDFMFLSED----KLHYRSARTKELDTLLGDLHCEIR 497
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD-- 525
D E + L + + L + ++ A+ LD L+LA A Y RP P +
Sbjct: 498 DQETLLMYQLQCQVLARASVLTRVLDLASRLDVLLALASAARDYGYSRP--HYSPCIHGV 555
Query: 526 -IQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
I+NGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GS
Sbjct: 556 RIRNGRHPLMELCARTFVPNSTDCGGDQGRVKVITGPNSSGKSIYLKQVGLITFMALVGS 615
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA+ A +G+ D+ + ++ S+FMIDL+QV + AT SL L+DEFGKG
Sbjct: 616 FVPAEEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKG 675
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T + DG+ LL + +++ P V V T+ L+ LP+ +++ TM
Sbjct: 676 TNSVDGLALLAAVLRHWLALGPSCPHVFVATNFLSLVQLQLLPQGPLVQYLTM------E 729
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D ED+VF Y+L G A S+ H A AG+P +I R V + ++ K ++ +
Sbjct: 730 TCEDGEDLVFFYQLCQGVASASHASHTAAQAGLPDPLIARGKEVSDLIRSGKPIKATNEL 789
Query: 755 NISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+ L D+ DL +F Q++LP+
Sbjct: 790 LRRNQMENCQALVDTFLKLDLEDPTLDLDIFISQEVLPA 828
>gi|410905403|ref|XP_003966181.1| PREDICTED: mutS protein homolog 5-like [Takifugu rubripes]
Length = 1057
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 259/808 (32%), Positives = 411/808 (50%), Gaps = 66/808 (8%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK 69
HG R+G+ +YD+ LH + D + + L+ V + P +I TS K E L+
Sbjct: 281 HG-RLGLCFYDNKDSSLHYMLDTSD-DHELHLLARVLQEVNPHVIITSAKQEHCMTRFLQ 338
Query: 70 RSDGTTE-APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEV 128
+ + P + F + + RL+ + + +S +E++ YL+S + S +
Sbjct: 339 QLGSNPDYKPEIVTYPYVDFDLKVSKQRLLSAHLPFLPVSISEREKMAYLSSCISFDSPL 398
Query: 129 QVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
+R G LL L+ R+ LE G + I +L + +D + LQIF++
Sbjct: 399 MLRTVGALLKCLDRRRVGVELEDSSVG---VPILQFHAYTLKGIICIDHDTYSVLQIFKS 455
Query: 189 DKHPS----HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ HPS H G KEG S++G++N+C G RLLR WFLRP DL L+ R I
Sbjct: 456 ELHPSVYKLHSG---EKEGLSLYGILNRCKCKFGSRLLRQWFLRPTQDLAVLHRRQEVIR 512
Query: 245 FFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSICSLLHVNKI 301
FF + + +++L L+ + +IP +L++ S +T S+W + K++ S +
Sbjct: 513 FFASPQNSDALSTLQSLLRNISNIPMLLRRM---SLSHTRVSNWQSLYKTVYSAV----- 564
Query: 302 FEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
+R+++R L + + + ++ +L Y+ L+ I+D S + T +R
Sbjct: 565 -------CIRDKVRNLPQSIQLFRDISEGLSDDLNYIASLINRIVDFEASIAENRFT-IR 616
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--FE 417
+DE ++ L +FL +VA EL QL C++YI IG+L+ +
Sbjct: 617 ANVHPAIDEKKRKMMGLSDFLTDVARRELEQLDTRVTSC---CVIYIPLIGFLLSLPRLP 673
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
++ E +QG +F F D RL Y + +T+ELD+LLGD++ I DME A+ L
Sbjct: 674 SMVEKEDFE-IQGLDFMFLSED----RLHYRSQRTKELDSLLGDLHCDIRDMETAVMTQL 728
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
+ I S L K ++ AELDC ++++ + + Y P LT + + RH L E+
Sbjct: 729 QNSILGRSASLYKVLDLIAELDCLMAMSSASQEYGYTSPKLTNHKRITVMEARHPLLELC 788
Query: 538 VDTFIPNDTR-IDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
F+PN R +D+ GR+ +ITGPN SGKSIY+KQV LIVF++ IGS VPA A VGL D
Sbjct: 789 SPVFVPNSFRSLDSQGRVKVITGPNSSGKSIYLKQVGLIVFMALIGSDVPAKEAEVGLVD 848
Query: 597 SKHMTAEQ--------SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ + S+FMIDL+Q+ L +T SL L+DEFGKGT T DG+ LL +
Sbjct: 849 GIYTRMQSRESVSVGLSTFMIDLNQMAQALNSSTGNSLVLIDEFGKGTNTVDGLSLLAAS 908
Query: 649 INYFV---TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
I++++ DV P VL+ T+ LL G LP S L T+ + D +++VFL
Sbjct: 909 ISHWLKKAAVDV-PHVLIATNFHSLLQLGLLPSSGFLSLLTL------ETAVDGDELVFL 961
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKN 765
Y+L G SY + A LAG+P +++R V E + K ++R + Q + +
Sbjct: 962 YQLKEGICQSSYAANIATLAGLPPSLVQRGVEVSELHRTGKPIKRIDTASTDEQANRCRF 1021
Query: 766 AVEKMLAFDVLKGDL---RLFFQDLLPS 790
VEK L+ D+ DL R ++LLPS
Sbjct: 1022 VVEKFLSLDLDDKDLDLQRFLKEELLPS 1049
>gi|5725250|emb|CAB52406.1| G7 protein [Homo sapiens]
Length = 851
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 264/833 (31%), Positives = 420/833 (50%), Gaps = 81/833 (9%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL L+SRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---L 342
Query: 279 IYT-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 343 SHTKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 392
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----D 446
Query: 398 MFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+E
Sbjct: 447 SRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKE 502
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 503 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYS 562
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 RPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQV 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+Q
Sbjct: 623 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQ 682
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P V V T+ L+ LP+
Sbjct: 683 SLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PTVFVATNFLSLVQLQLLPQGP 739
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+++ TM D D+VF Y++ G A S+ H A AG+P +++ R V +
Sbjct: 740 LVQYLTM------ETCEDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSD 793
Query: 741 AAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
++ K ++ Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 LIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 846
>gi|355561542|gb|EHH18174.1| hypothetical protein EGK_14724 [Macaca mulatta]
Length = 851
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 263/833 (31%), Positives = 419/833 (50%), Gaps = 81/833 (9%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYMGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHRQPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTAPRRLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSAYKVASGLKEGLSLFGILNRCRCKRGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL LNSRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELNSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---L 342
Query: 279 IYT-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T SDW K++ L + SL + ++L DI ++ + +L ++
Sbjct: 343 SHTKVSDWQVLYKTVYGALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 392
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----D 446
Query: 398 MFVPC--IVYIHQIGYLMCIFEEK-LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+E
Sbjct: 447 SRIPSCSVIYIPLIGFLLSIPRLPFMVEASDFEINGLDFMFL----SEEKLHYRSARTKE 502
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 503 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTQVLDLASRLDVLLALASAARDYGYS 562
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 RPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQV 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+Q
Sbjct: 623 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQ 682
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 683 SLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGP 739
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+++ TM D D+VF Y++ G A S+ H A AG+P +++ R V +
Sbjct: 740 LVQYLTM------ETCEDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSD 793
Query: 741 AAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
++ K ++ Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 LIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 846
>gi|60459550|gb|AAX20111.1| mutS homolog 5 (E. coli) [Homo sapiens]
gi|119623912|gb|EAX03507.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens]
gi|119623915|gb|EAX03510.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens]
gi|119623925|gb|EAX03520.1| mutS homolog 5 (E. coli), isoform CRA_b [Homo sapiens]
Length = 851
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 263/833 (31%), Positives = 420/833 (50%), Gaps = 81/833 (9%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL L+SRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---L 342
Query: 279 IYT-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 343 SHTKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 392
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----D 446
Query: 398 MFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+E
Sbjct: 447 SRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKE 502
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 503 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYS 562
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 RPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQV 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+Q
Sbjct: 623 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQ 682
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 683 SLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGP 739
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+++ TM D D+VF Y++ G A S+ H A AG+P +++ R V +
Sbjct: 740 LVQYLTM------ETCEDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSD 793
Query: 741 AAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
++ K ++ Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 LIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 846
>gi|296197725|ref|XP_002806735.1| PREDICTED: LOW QUALITY PROTEIN: mutS protein homolog 5 [Callithrix
jacchus]
Length = 834
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 261/816 (31%), Positives = 416/816 (50%), Gaps = 63/816 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I L
Sbjct: 108 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILXL 167
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + + L + LD
Sbjct: 168 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILAFKKFVLTHLVNLDQD 224
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 225 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELN 284
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ SDW K++ S
Sbjct: 285 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 342
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 343 LGLRDA-----CCSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 392
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 393 T-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 446
Query: 414 CIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
CI + + + ++ G +F F ++L Y + +T+EL G ++ +I D E
Sbjct: 447 CIPRLSSMVEASDFEIDGLDFMFL----SEEKLHYRSARTKELXXXXGILHCEIRDQETL 502
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRH 531
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH
Sbjct: 503 LMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRH 562
Query: 532 VLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LIVF++ +GSFVPA+ A
Sbjct: 563 PLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLIVFMALVGSFVPAEEA 622
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
+G D+ + ++ S+FMIDL+ QV + AT+QSL L+DEFGKGT T DG
Sbjct: 623 EIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDEFGKGTNTVDG 682
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 683 LALLAAVLRHWLALGRTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCE 733
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D D+VF Y++ G A S+ H A+ AG+P ++ R V + ++ K ++
Sbjct: 734 DGNDLVFFYQVCEGVAKASHASHTAVQAGLPNRLVARGKEVSDLIRSGKPIKPVKDLLKK 793
Query: 758 AQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 NQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 829
>gi|355762486|gb|EHH61984.1| hypothetical protein EGM_20140 [Macaca fascicularis]
Length = 850
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 262/832 (31%), Positives = 416/832 (50%), Gaps = 79/832 (9%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 49 IHLCVLWNSGYMGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 107
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 108 NMTRFLGKLASQEHRQPKRPEIVFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILFL 167
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 168 SSIIPFDCLLTAPRRLRFTPVPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 224
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 225 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSAYKVASGLKEGLSLFGILNRCRCKRGEK 284
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL LNSRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 285 LLRLWFTRPTHDLGELNSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH- 343
Query: 279 IYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE 338
SDW K++ L + SL + ++L DI + + +L ++
Sbjct: 344 -TKVSDWQVLYKTVYGALGLRDA-----CRSLPQSIQLFR-DIAHE----FSDDLHHIAS 392
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 LIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DS 446
Query: 399 FVPC--IVYIHQIGYLMCIFEEK-LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+EL
Sbjct: 447 RIPSCSVIYIPLIGFLLSIPRLPFMVEASDFEINGLDFMFL----SEEKLHYRSARTKEL 502
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
D LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y R
Sbjct: 503 DALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTQVLDLASRLDVLLALASAARDYGYSR 562
Query: 516 PILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVA 573
P + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 PRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVG 622
Query: 574 LIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+QS
Sbjct: 623 LITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQS 682
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSER 681
L L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 683 LVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPL 739
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+++ TM D D+VF Y++ G A S+ H A AG+P +++ R V +
Sbjct: 740 VQYLTM------ETCEDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDL 793
Query: 742 AQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
++ K ++ Q + + V+K + D+ DL +F Q++LP+
Sbjct: 794 IRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 845
>gi|328866399|gb|EGG14783.1| mutS like protein [Dictyostelium fasciculatum]
Length = 987
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 230/774 (29%), Positives = 396/774 (51%), Gaps = 85/774 (10%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
+A I + ++G++YYD L + E WED + F + I+K Q +P++I ++ + F
Sbjct: 189 LAVIYNKLKLGIAYYDHMTSTLSMSESWEDDS--FNCLTILKQQIKPKMIIVPSRMPQKF 246
Query: 65 LSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDM 124
+ + ++ + K S F Y+ RL L++ DD + YL
Sbjct: 247 IDQINLNETPEYESVIYTAKQSDFDYDLGKTRLFNLKLPCQDD---FHAKSHYL------ 297
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
E Q++A+ GLL+ L +D E E+ + I+ + +SL+++L +D + +LQ
Sbjct: 298 --ETQIKATSGLLSYLSKFLALDEFETLEN----LQINEIQHISLDQYLHMDINSLYSLQ 351
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
IF ++HPS G +KEG S+FG++NK + +G+R+L++WF+RP + RL+ I
Sbjct: 352 IFSNEQHPSCYSFGNSKEGLSLFGILNKTKSKIGKRMLKSWFMRPSRQRTIIEDRLDVIE 411
Query: 245 FFLCSEE--LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ L + ++ L ++ ++D+ IL + + +S C+ L
Sbjct: 412 WLLDQSQSTIIQELLVSIGNIRDLHMILNRL-------------SLSQSPCNDL------ 452
Query: 303 EVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVI-GIIDVNRSKEKGYGT----- 356
+ I +L +++ I+E + T L + + I D+ E +
Sbjct: 453 -ISIYNTLYNYFQIIT--IIENSPD--TPNLIKGTHIALDSIKDLFEHFENTFSLEHILK 507
Query: 357 ----LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK-EMFVPCIVYIHQIGY 411
+R+GF +LD+LR+++ + L +E + + E F VY Q+G
Sbjct: 508 FRQLYIRDGFDQQLDKLREVFNSMSSILTNTGEIEKTKFSRITWIESF--HFVYYPQLGC 565
Query: 412 LMCI-FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
L+CI + T + ++G +F F ++ +++ KT+ELD GDI+H I+D++
Sbjct: 566 LICIPISHTVPIQTQKNIKGLKFLFQ----TSQYIYFQNEKTKELDEYFGDIHHDIIDIQ 621
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
I R +V + L+ N+ ++LDCF+SLAL + + N+++P + E ++I NGR
Sbjct: 622 SRIERSIVDKVLENVSQLVAICNYCSQLDCFISLALASKELNFVKPTINNEHRINIVNGR 681
Query: 531 HVLQEMTVDTFIPNDTR--------------IDNDGRINIITGPNYSGKSIYIKQVALIV 576
H LQE+ V TFIPNDT+ + + ITGPN SGKSIY+KQVA+IV
Sbjct: 682 HPLQEICVQTFIPNDTKINTIDNIDNNINNNNNEKKQFLFITGPNQSGKSIYLKQVAIIV 741
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
FL+H+G FVPA +A + L D + +SSFMID Q+ M R +TS SL +
Sbjct: 742 FLTHLGCFVPASSADICLCDRIFTRVSSRESCMVSESSFMIDCKQISQMTRFSTSNSLLI 801
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
+DEFGKGT +DGI +L I + + D P L+CTH EL + + ++ F +M
Sbjct: 802 IDEFGKGTNPKDGISILYSLIEFLLFKDNAPITLMCTHFYELFDLFTPEMNNQILFNSME 861
Query: 689 VLRPENNS--TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ ++NS D+ + + LY+L+ + S+GL CA+ AGV +++ R +++
Sbjct: 862 FIIDDSNSLGLDISNYIPLYKLINKKSTQSFGLTCAMNAGVSKDILIRTMEIIK 915
>gi|449273994|gb|EMC83310.1| MutS like protein 5, partial [Columba livia]
Length = 775
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 253/801 (31%), Positives = 410/801 (51%), Gaps = 84/801 (10%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
+ +M+ + + ++ ++YYD+ ++ + D N D L+ + PQ + TS K +
Sbjct: 9 ETHMSVLWYAGQLAITYYDTEDCSVYFMPDTPD-NEDLKLLHKAIGEINPQCVVTSAKQD 67
Query: 62 ES---FLSALKRS--DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++ FL+ L + D T P + L + F E + R++ + + ++ E+I
Sbjct: 68 QNIAKFLANLTATAGDNNTRKPEIVLFPNIDFGLEVSKQRILSRQFPFIPSHMTATEKIL 127
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
YL+S++ S + +RA GGLL L+ R+ +E +ES A + I + + L + +D
Sbjct: 128 YLSSVIPFESPLMIRALGGLLKFLDRRRV--GVELEESAIA-VPILAFKKFVLTDIVSMD 184
Query: 177 ATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
+ LQIF++D HPS + KEGFS++G++N+C G +LLR W RP +L
Sbjct: 185 QDTYCVLQIFKSDIHPSVYKLSSGLKEGFSLYGILNRCRCKWGEKLLRLWLTRPTRNLTE 244
Query: 236 LNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
LN RL+ I FFL ++ E + +L LK +K++P ILK+ + SDW A K+
Sbjct: 245 LNKRLDVIHFFLLAQNHETVLTLQGCLKNIKNVPLILKRMTLSN--TKVSDWQALYKTAY 302
Query: 294 SLLHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
S + LR+ R L ++ + T +L Y+ L+ ++D S
Sbjct: 303 SAV------------CLRDTCRSLPSTIELFHTISRVFTDDLHYIATLISKVVDFEGSIS 350
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP--CIVYIHQI 409
+ T V+ +DE ++ L +FL EVA EL L + +P C++YI I
Sbjct: 351 ENRFT-VKPNVDPTIDEKKRKLMGLSDFLTEVARKELETL-----DNHIPSCCVIYIPLI 404
Query: 410 GYLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
G+L+ I +D + E ++G +F F D +L Y + +T+ELD+LLGD++ +I
Sbjct: 405 GFLLSIPRLPTMVDKSDFE-IEGLDFMFLSED----KLHYRSARTKELDSLLGDLHCEIR 459
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
D E I L + I S+ L+ + + A LD L+LA++A +N Y RP T I+
Sbjct: 460 DQETLIMHQLQTKILEKSEVLISVIEYTAHLDVLLALAVMARENAYCRPRFTHRHGFHIK 519
Query: 528 NGRHVLQEMTVDTFIPNDTRIDNDG----RINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+GRH L E+ TF+ N N G RI IITGPN SGKSIY+KQV LIVF++ IGS
Sbjct: 520 DGRHPLMELCAKTFVANPV---NSGEATRRIKIITGPNSSGKSIYLKQVGLIVFMALIGS 576
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
+VPA A +G+ D + ++ S+FMIDL+QV + AT +SL L+DEFGKG
Sbjct: 577 YVPAAEAEIGVIDGIYTRIHSRESVSVGLSTFMIDLNQVAKAVNNATERSLVLIDEFGKG 636
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ LL + Y++ P+V V T+ L+ G LP + L++ TM
Sbjct: 637 TNTLDGLSLLAAVLRYWIGQGTQCPQVFVSTNFHSLMQLGLLPDTPLLEYLTM------E 690
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
D ++++F Y++ G ++ V EV E +N K ++R H
Sbjct: 691 THQDGDELIFFYQIKQG------------MSTVRVEVS-------ELLRNGKAIKRIDHP 731
Query: 755 NISAQDQQYKNAVEKMLAFDV 775
+ + ++ ++ VEK L D+
Sbjct: 732 SKGDRMEKSRSVVEKFLRLDL 752
>gi|348526970|ref|XP_003450992.1| PREDICTED: mutS protein homolog 5 [Oreochromis niloticus]
Length = 817
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 256/816 (31%), Positives = 416/816 (50%), Gaps = 67/816 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
V ++ ++ +VG+ +YDS LH + D N + L+ V + P +I TS K E
Sbjct: 33 VLLSVLVQHGQVGLCFYDSQDSSLHYMPDTPD-NQELHLLVRVIQEVSPHVIITSAKQER 91
Query: 63 SFLSALKRSDGTTE-APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
S L++ P V F E + RL+ + + +S ++++ YL+S
Sbjct: 92 SMTRFLQQLGSNPHYRPEVVTYPYVDFGLEVSKQRLLSAHLPFLPACISERDKLSYLSSC 151
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
+ S + +RA G LL L+ R+ LE G + I +L + +D+ +
Sbjct: 152 ISFDSSLMLRAVGALLKCLDRRRVGVELEDSSVG---VPILQFHAYTLKGMVYIDSDTYS 208
Query: 182 ALQIFQTDKHPS----HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
LQIF+++ HPS H G KEG S++G++N+C G +LLR WFL+P DL+ L
Sbjct: 209 VLQIFKSELHPSVYKLHSG---EKEGLSLYGILNRCKCKFGSKLLRQWFLQPTQDLKVLK 265
Query: 238 SRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
R I FF + + + +L +L+ +++IP +L++ + +DW + K++ S
Sbjct: 266 RRQEVIRFFTSPQNSDSLRTLQSSLRNIRNIPTLLRRMTLS--LTKVTDWQSLYKTVYSA 323
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + + L + ++L DI E + +L Y+ L+ ++D S
Sbjct: 324 VCIRDT-----ARHLPQSIQLFR-DISEG----FSDDLNYITSLISRVVDFEASLADNRF 373
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
T V+ +DE ++ L +FL +VA EL HL + C++YI IG+L+ +
Sbjct: 374 T-VKPNVDPAIDEKKRRMMGLSDFLTDVARREL---EHLDARIPSCCVIYIPVIGFLLSV 429
Query: 416 -----FEEKLDDTTLEQLQGFEFAF-SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
EK D +++G +F F SD RL Y + +TREL+ LGD++ I DM
Sbjct: 430 PRLPNMVEKKD----FEMEGLDFLFLSD-----NRLHYRSQRTRELNEFLGDLHCDIRDM 480
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E A+ L S + SD L K ++ AAELDC ++++ + + NY P L + I G
Sbjct: 481 EMAVMAHLQSAVLERSDSLFKVLDLAAELDCLMAMSSASQEYNYTSPKLASNRKITITQG 540
Query: 530 RHVLQEMTVDTFIPND-TRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
RH L E+ F+ N +++GR+ IITGPN SGKSIY+KQV LIVF++ IGS VPA
Sbjct: 541 RHPLLELCSPVFVANSFHSSESEGRVKIITGPNSSGKSIYLKQVGLIVFMALIGSDVPAK 600
Query: 589 AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +GL D + ++ S+FMIDL+Q+ L +T SL L+DEFGKGT T D
Sbjct: 601 EAEIGLVDGIFTCMQSRESVSVGLSTFMIDLNQMAQALNSSTGNSLVLIDEFGKGTNTVD 660
Query: 641 GIGLLGGTINYFVT---CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
G+ LL +I+Y++ DV P VLV T+ ++ + L + L +
Sbjct: 661 GLSLLAASISYWLGKALGDV-PHVLVATNFHSVV------QLSLLPSSALLSLLTLETAV 713
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
D +++VFLY+L G SY + A LAG+P +++RA V E + + ++R ++
Sbjct: 714 DGDELVFLYQLKEGICQSSYAANIATLAGLPTSLVQRAVEVSELYRAGRPIKRTEKASLE 773
Query: 758 AQDQQYKNAVEKMLAFDVLKGDL---RLFFQDLLPS 790
+ ++ + VEK L+ ++ DL R ++LLPS
Sbjct: 774 EETKRCQFVVEKFLSLNLEDKDLDVQRFLKEELLPS 809
>gi|81891999|sp|Q6MG62.1|MSH5_RAT RecName: Full=MutS protein homolog 5
gi|46237606|emb|CAE83984.1| mutS homolog 5 [E. coli] [Rattus norvegicus]
gi|149028040|gb|EDL83491.1| mutS homolog 5 (E. coli), isoform CRA_b [Rattus norvegicus]
gi|149028041|gb|EDL83492.1| mutS homolog 5 (E. coli), isoform CRA_b [Rattus norvegicus]
Length = 831
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 259/817 (31%), Positives = 412/817 (50%), Gaps = 66/817 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 47 IHLCVLWSSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 105
Query: 63 S---FLSALKRSDGT-TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + L+ S F E + RL+ + + + ++ E+I +L
Sbjct: 106 AMTQFLGKLASQEHREPKRPEIILLPSVDFGPEISKQRLLSGNYSFISESMTATEKILFL 165
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L R+ LE G + I + L + +D
Sbjct: 166 SSIIPFDCVLTVRALGGLLKFLSRRRVGVELEDYSVG---VPILGFKKFVLTHLVSIDQD 222
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LN
Sbjct: 223 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCRWGQKLLRLWFTRPTRELRELN 282
Query: 238 SRLNAISFFLCSEEL-MASL-HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA + H L ++K++P ILK+ SDW K++ S
Sbjct: 283 SRLDVIEFFLMPQNLDMAQMMHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 340
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 341 LGLRDA-----CRSLPQSIQLFR-DITQE----FSDDLHHIASLIGKVVDFEESLAENRF 390
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+D ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 391 T-VLPNIDPEIDAKKRRLMGLPSFLTEVAQKELENL-----DSCIPSCSVIYIPLIGFLL 444
Query: 414 CI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
I F + D +E G +F F D +L Y + +T+ELD LLGD++ +I D
Sbjct: 445 SIPRLSFMVEASDFEIE---GLDFMFLSED----KLHYRSARTKELDALLGDLHCEIRDQ 497
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD---I 526
E + L + + L + ++ A+ LD L+LA A Y RP P + I
Sbjct: 498 EMLLMHQLQCQVLARAPVLTRVLDLASRLDVLLALASAARDYGYSRP--HYSPCIQGVRI 555
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+NGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFV
Sbjct: 556 KNGRHPLMELCARTFVPNSTDCGGDQGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFV 615
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA+ A +G+ D+ + ++ S+FMIDL+QV + AT SL L+DEFGKGT
Sbjct: 616 PAEEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKGTN 675
Query: 638 TEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
+ DG+ LL + +++ P + V T+ L+ LP+ +++ TM
Sbjct: 676 SVDGLALLTAVLRHWLALGPSCPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETC 729
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D D+VF Y+L G A S+ + A AG+P +I R V ++ ++ K V+
Sbjct: 730 EDGNDLVFFYQLCHGVASASHASYTAAQAGLPDPLIARGKEVSDSIRSGKPVKPMHELVR 789
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 790 RTQMENCQALVDKFLKLDLEDPSLDLDIFISQEVLPA 826
>gi|345778359|ref|XP_532080.3| PREDICTED: mutS protein homolog 5 isoform 1 [Canis lupus
familiaris]
Length = 798
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 255/783 (32%), Positives = 397/783 (50%), Gaps = 69/783 (8%)
Query: 37 SDFPLIDIVKYQAQPQIIYTSTKSEES---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQ 92
S PL+D + P+ I T+ K +E+ FL L + + P + + S F E
Sbjct: 51 SGRPLLD----EINPRSIVTTAKQDENMTRFLGKLASQEHSKPKRPEIIFLPSVDFGLEI 106
Query: 93 AWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQK 152
+ RL+ T + ++ E+I +L+S++ + VRA GGLL L RI LE
Sbjct: 107 SKQRLLSGNYTFIPYSMTTTEKILFLSSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY 166
Query: 153 ESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMN 211
N S+ I + L + +D + LQIF+++ HPS + KEG S+FG++N
Sbjct: 167 ---NISVPILGFKKFVLTHLVSIDQDTYSVLQIFKSEPHPSVYKVASGLKEGLSLFGILN 223
Query: 212 KCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHI 269
+C G +LLR WF RP DLE LNSRL+ I FFL + L MA LH L ++K++P I
Sbjct: 224 RCRCKWGEKLLRLWFTRPTQDLEELNSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLI 283
Query: 270 LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL--NFDIVEKAAS 327
LK+ SDW K++ S L LR+ R L + + + A
Sbjct: 284 LKRMKLSH--TKTSDWQVLYKTVYSAL------------GLRDACRSLPQSIQLFQDIAQ 329
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
+ +L ++ L+ ++D S + + T V ++DE ++ LP FL EVA E
Sbjct: 330 EFSDDLHHIASLIGKVVDFEGSLAENHFT-VLPNIDPDIDEKKRRLMGLPSFLTEVARKE 388
Query: 388 LVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKR 444
L L + +P ++YI IG+L+ I + + + +++G +F F +
Sbjct: 389 LENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMAEASDFEIEGLDFMFL----SEGK 439
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
L Y + +T+ELD LLGD++ I D E + L + + + ++ A+ LD L+L
Sbjct: 440 LHYRSARTKELDALLGDLHCDIRDQETLLMHQLQCQVLARAAVFTRVLDLASRLDVLLAL 499
Query: 505 ALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNY 562
A A Y RP + + L + IQNGRH L E+ TF+PN D GR+ +ITGPN
Sbjct: 500 ASAARDYGYSRPRYSPQLLGVRIQNGRHPLMELCARTFVPNSAECGGDRGRVKVITGPNS 559
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQV 614
SGKSIY+KQV LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV
Sbjct: 560 SGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQV 619
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTEL 670
+ AT QSL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L
Sbjct: 620 AKAVNNATKQSLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPTC---PHIFVATNFLSL 676
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
+ LP+ +++ TM D +D+VF Y++ G A S+ H A AG+P +
Sbjct: 677 VQLQLLPQGPLVQYLTM------ETCEDGDDLVFFYQVCDGLAKASHASHTAAQAGLPDQ 730
Query: 731 VIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDL 787
++ R V + ++ K ++ Q + + V+K L D+ DL LF Q++
Sbjct: 731 LLTRGKEVSDLIRSGKPIKPVKELLKEKQMENCQMLVDKFLKLDLEDPNLDLDLFMSQEV 790
Query: 788 LPS 790
LP+
Sbjct: 791 LPA 793
>gi|260099641|ref|NP_997701.2| mutS protein homolog 5 [Rattus norvegicus]
gi|54035356|gb|AAH83904.1| MutS homolog 5 (E. coli) [Rattus norvegicus]
Length = 830
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 261/817 (31%), Positives = 413/817 (50%), Gaps = 67/817 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 47 IHLCVLWSSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 105
Query: 63 S---FLSALKRSDGT-TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + L+ S F E + RL+ + + + ++ E+I +L
Sbjct: 106 AMTQFLGKLASQEHREPKRPEIILLPSVDFGPEISKQRLLSGNYSFISESMTATEKILFL 165
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L R+ LE G + I + L + +D
Sbjct: 166 SSIIPFDCVLTVRALGGLLKFLSRRRVGVELEDYSVG---VPILGFKKFVLTHLVSIDQD 222
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G++LLR WF RP +L LN
Sbjct: 223 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCRWGQKLLRLWFTRPTRELRELN 282
Query: 238 SRLNAISFFLCSEEL-MASL-HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA + H L ++K++P ILK+ SDW K++ S
Sbjct: 283 SRLDVIEFFLMPQNLDMAQMMHRLLSHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSA 340
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L IG +D S +
Sbjct: 341 LGLRDA-----CRSLPQSIQLFR-DITQE----FSDDLHHIASL-IGKVDFEESLAENRF 389
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLM 413
T V E+D ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 390 T-VLPNIDPEIDAKKRRLMGLPSFLTEVAQKELENL-----DSCIPSCSVIYIPLIGFLL 443
Query: 414 CI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
I F + D +E G +F F D +L Y + +T+ELD LLGD++ +I D
Sbjct: 444 SIPRLSFMVEASDFEIE---GLDFMFLSED----KLHYRSARTKELDALLGDLHCEIRDQ 496
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD---I 526
E + L + + L + ++ A+ LD L+LA A Y RP + P + I
Sbjct: 497 EMLLMHQLQCQVLARAPVLTRVLDLASRLDVLLALASAARDYGYSRPHYS--PCIQGVRI 554
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+NGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFV
Sbjct: 555 KNGRHPLMELCARTFVPNSTDCGGDQGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFV 614
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA+ A +G+ D+ + ++ S+FMIDL+QV + AT SL L+DEFGKGT
Sbjct: 615 PAEEAEIGVIDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEHSLVLIDEFGKGTN 674
Query: 638 TEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
+ DG+ LL + +++ P + V T+ L+ LP+ +++ TM
Sbjct: 675 SVDGLALLTAVLRHWLALGPSCPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETC 728
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D D+VF Y+L G A S+ + A AG+P +I R V ++ ++ K V+
Sbjct: 729 EDGNDLVFFYQLCHGVASASHASYTAAQAGLPDPLIARGKEVSDSIRSGKPVKPMHELVR 788
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 789 RTQMENCQALVDKFLKLDLEDPSLDLDIFISQEVLPA 825
>gi|291395788|ref|XP_002714325.1| PREDICTED: mutS homolog 5 [Oryctolagus cuniculus]
Length = 835
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 258/818 (31%), Positives = 410/818 (50%), Gaps = 67/818 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 50 IHLCVLWNAGHLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEVSPRSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + P + + S F E + RL+ + M D ++ E+I +L
Sbjct: 109 AMTQFLGKLASQEHREPRRPEIVYLPSVDFGLEISKQRLLCGNYSFMPDSMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N ++ I + + L + +D
Sbjct: 169 SSIIPFDCLLLVRALGGLLKFLSRRRIGVELEDH---NVNVPILAFKKFVLTHLVSIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LN
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELN 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
SRL+ I FFL + L MA LH L ++K++P ILK+ + +DW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLSHIKNVPLILKRMKLSN--TKVNDWHVLYKTVYSA 343
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 344 LGLRD-----ACRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRF 393
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP--CIVYIHQIGYLM 413
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L+
Sbjct: 394 T-VLPNIDPEIDEKKRRLVGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLL 447
Query: 414 CI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
I F + D ++ G +F F ++L Y + +T+ELD LLGD++ +I D
Sbjct: 448 SIPRLPFMVEASDF---EIDGLDFMFL----SEEKLHYRSARTKELDTLLGDLHCEIRDQ 500
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL---DI 526
E + L + + L + ++ A+ LD L+LA A Y RP PLL I
Sbjct: 501 ETLLMYQLQCQVLARAAVLSRVLDLASRLDVLLALASAARDYGYSRP--RYSPLLHGVRI 558
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
QNGRH L E+ TF+PN D R+ +ITGPN SGKSI++KQV LI F++ +GSFV
Sbjct: 559 QNGRHPLMELCARTFVPNSVECGGDKERVKVITGPNSSGKSIFLKQVGLITFMALVGSFV 618
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQSLCLLDEFGKGT 636
PA+ A +G D+ + ++ S+FMIDL+ QV + AT +SL L+DEFGKGT
Sbjct: 619 PAEEAEIGPVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATERSLVLIDEFGKGT 678
Query: 637 LTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T DG+ LL + +++ P + V T+ L+ LP+ +++ TM
Sbjct: 679 NTVDGLALLAAVLQHWLALGPACPHIFVATNFLSLVQLQLLPQGPLVQYLTM------ET 732
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
D D+VF Y++ G A S+ H A AG+P ++ R V + + + +
Sbjct: 733 CEDGNDLVFFYQVCKGVASASHASHTATQAGLPDRLVARGKEVSDLIRRGRPITPVKELQ 792
Query: 756 ISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K L D+ DL +F Q++LP+
Sbjct: 793 KETQMKNCQTLVDKFLKLDLEDPSLDLDVFMSQEVLPA 830
>gi|301620264|ref|XP_002939511.1| PREDICTED: mutS protein homolog 5-like [Xenopus (Silurana)
tropicalis]
Length = 793
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 244/799 (30%), Positives = 393/799 (49%), Gaps = 82/799 (10%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+Y++ + H + V YY+SS +H + ++ +F ++ + QP+ I TS K ++
Sbjct: 28 IYLSVLWHAGVLAVVYYNSSNCSVHFMPDAPETE-EFRMLKRIIADLQPKCILTSAKQDQ 86
Query: 63 SFLSALK--------RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKER 114
F L+ S+G++ P + + F + R++ + + E+
Sbjct: 87 PFSDFLQSTNSCHNEESNGSSR-PEIIVFPHVDFGLQICKRRILSWNFPTLPSNFTESEK 145
Query: 115 ICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
I YL+S++ + GGLL LE RI LE G + I S+ + L+ +
Sbjct: 146 ILYLSSIIPFDCPKMICTLGGLLKFLERRRIGVQLEDCSVG---VPILSLKKYVLSDIVD 202
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
+D + LQIF+++ HPS + KEG S++G++N+C T G LR W +RP +
Sbjct: 203 MDQDTYSVLQIFKSEVHPSVYKLTSGVKEGLSLYGLLNRCCTKQGENTLRMWLMRPTTNQ 262
Query: 234 ENLNSRLNAISFFLC--SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
L SRL+ I FF+ +++++ + +LK +K+IP +
Sbjct: 263 CQLGSRLDVIEFFIAPQNQQIVENFQSSLKSIKNIP-----------------------A 299
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+CS ++ I ++ R + N + +S + EL Y+ L+ ++D S
Sbjct: 300 VCSAIY--------IGDTCRTLPQ--NVFLFSTISSAFSNELLYIKNLIGKVVDFEESV- 348
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
KG ++ +DE ++ LP FL +VA EL L + I+YI IG+
Sbjct: 349 KGRCFCIKPFVDPAVDEKKRQLRGLPSFLTDVAKKELETLDSHIPSCY---IIYIPLIGF 405
Query: 412 LMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
L+ F E +D ++ G EF F + G RL+Y T +TRELD+L GD++ +I
Sbjct: 406 LLSFQRLPFMEDKNDF---KIAGLEFMFL-LQG---RLYYRTVRTRELDSLFGDLHCEIR 458
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
D E I L + S F +LD L++A++A +N Y RP T+ + I+
Sbjct: 459 DQETVIMYQLQTLTLEKSAVFQYVTEFTGQLDALLAMAVIARENGYTRPRYTMGNSIYIK 518
Query: 528 NGRHVLQEMTVDTFIPNDT-RIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH L TF+PN T N+ RI IITGPN GKS+Y+KQV LIVF+S IGSFVP
Sbjct: 519 EGRHPLMVFCSGTFVPNSTLSKQNEKRIKIITGPNSCGKSVYLKQVGLIVFMSMIGSFVP 578
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G D + ++ S+FMIDL+QV + AT +SL L+DEFGKGT T
Sbjct: 579 AAEAEIGPVDGIFTRIQSLESVSLGLSTFMIDLNQVARAVNNATEKSLVLIDEFGKGTNT 638
Query: 639 EDGIGLLGGTINYFVT--CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
DG+ LL + +++ C P + V T+ L+ LP S L+F T+
Sbjct: 639 VDGLSLLAAVLRHWINMGCQC-PHIFVATNFHSLVKLKILPDSPILQFQTLEW------C 691
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D E+IVF Y++ G + S A LAG+PA +IKRA V E + + ++ + +
Sbjct: 692 LDGEEIVFFYQIKDGVSEASQAAKVAALAGLPAGIIKRAIEVSELFRTGQAIQCLNQTEM 751
Query: 757 SAQDQQYKNAVEKMLAFDV 775
+ ++ +N V + L+ D+
Sbjct: 752 DKKKEKCQNLVSRFLSLDL 770
>gi|320166692|gb|EFW43591.1| MSH5 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1055
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 260/878 (29%), Positives = 418/878 (47%), Gaps = 140/878 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
+V +A +G +YYD++ QLHV+ D+N D ++++V Q P ++ ST +
Sbjct: 204 RVILAISWRSGMLGAAYYDTNTMQLHVISDVRDAN-DLSVLEMVFMQVSPDVVVISTNQD 262
Query: 62 ESFLSALKRSDGT------TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERI 115
E + L+ T A T++ + + F+ + RLI+ + L +ER
Sbjct: 263 EDVVVRLRGLMATGVAGEGKPACTLEKLPAGDFAPDLCKRRLIHAHCAMVPPYLRDEERE 322
Query: 116 CYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
++ S + + +RA+G L+ +E R+ LE + + I ++ L++ + +
Sbjct: 323 VFIQSAVPFENVQMIRAAGALVRFIELHRVGVELED---AHVRVPITTIEMTCLDRMMAM 379
Query: 176 DATAHEALQIFQTDKHP--SHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
D A +LQIFQ + HP +G KEG S+FG+ N+ T +G + LRP+ DL
Sbjct: 380 DDNALSSLQIFQKESHPVTGKLGKNGGKEGLSLFGLANRTRTSLG-----SAKLRPLADL 434
Query: 234 ENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHIL----KKFNSPSFIYTASDWTA 287
+ R I+F L E + + L + ++ +K++ I+ + SPS DW
Sbjct: 435 SEIRERHRTIAFLLNPEHADTLKVLTDCVRQIKNMVRIIGFMQRSHASPS------DWKV 488
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFD--IVEKAASCITTELAYVYELVIGIID 345
KS+ + L+ L+ LN D I + ASC ++ L+ IID
Sbjct: 489 LFKSMYHAVQ------------LQTALKALNSDLRIFSEFASCFGPDIPETIALINKIID 536
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL--CKEMFVPCI 403
++S + +V+ + LDE++++Y+ LP+ + VA E+ + C +
Sbjct: 537 FDQSIVQQR-FVVKAAIDNTLDEMKRMYQGLPDLMTNVALAEMDDNAEIDECN------V 589
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQ---LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
VY QIGYL+ + + +E+ + GF+F F + Y +P+TRE+D LG
Sbjct: 590 VYFPQIGYLVAV--PRRPTMRMEKDFAITGFDFQFVTQ----HSIHYKSPRTREMDQELG 643
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD--------------------- 499
DI+ I+D E I L + + + K ++ A LD
Sbjct: 644 DIHGDIIDRETDIMYGLQKEVLKRTRSVAKIMDLVATLDWQVATFSHGAALGLLNTSLIA 703
Query: 500 ---CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID-NDGRIN 555
FL+LA A + NY +P++ E +LDI GRH LQE+ VDTFIPNDT + G ++
Sbjct: 704 VTNSFLALASFAREYNYTQPVMMEENVLDITGGRHPLQELCVDTFIPNDTDLSVQSGPVH 763
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
I+TGPN SGKSIY+KQ+A+I FL+ +GSFVPA+ A +G D + ++ +S+F
Sbjct: 764 IVTGPNASGKSIYLKQIAMIQFLAQVGSFVPAERAVLGCVDRIFTRIHTRESVSVARSTF 823
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTH 666
MIDL+QV + LR AT++SL ++DEFGKGT DG+ LL ++ V+ PK ++ TH
Sbjct: 824 MIDLNQVVLALRFATARSLVVIDEFGKGTSAADGLALLSAVVSELVSRGAACPKTVISTH 883
Query: 667 LTELLNEGCLPKSE----RLKFYTMSVLR----------PEN------NSTDVE------ 700
+L G LP + LKF+ + VL P N N+ D +
Sbjct: 884 FHKLCMPGLLPPAAISAGLLKFFCLEVLETVAPRDALVSPRNVNSEHTNTIDADADVARK 943
Query: 701 ------------------DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
D+VFLYR+V G A S+G A LAGVP V+ R V +
Sbjct: 944 RACLGGGNQHSTLHGNTNDLVFLYRVVSGTAQSSFGCRIAGLAGVPLAVVARGMQVTDLH 1003
Query: 743 QNNKHVERWSH-ENISAQDQQYKNAVEKMLAFDVLKGD 779
V R E+ + ++ V L D+ G+
Sbjct: 1004 ARGDRVHRLGETESDVTRRAAHREIVSCFLQCDLAGGE 1041
>gi|119623922|gb|EAX03517.1| mutS homolog 5 (E. coli), isoform CRA_g [Homo sapiens]
Length = 823
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 258/823 (31%), Positives = 412/823 (50%), Gaps = 89/823 (10%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSICS 294
SRL+ I FFL + L MA LH L ++K++P ILK+ +T SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---LSHTKVSDWQVLYKTVYS 342
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L I V S + +
Sbjct: 343 ALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASL---IGKVYLSPQVDF 389
Query: 355 -GTLVREGFC------DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVY 405
G+L F E+DE ++ LP FL EVA EL L + +P ++Y
Sbjct: 390 EGSLAENRFTVLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIY 444
Query: 406 IHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
I IG+L+ I + + + ++ G +F F ++L Y + +T+ELD LLGD++
Sbjct: 445 IPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHC 500
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL- 523
+I D E + L + + L + ++ A+ LD L+LA A Y RP + + L
Sbjct: 501 EIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLG 560
Query: 524 LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
+ IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +G
Sbjct: 561 VRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVG 620
Query: 583 SFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGK
Sbjct: 621 SFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGK 680
Query: 635 GTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
GT T DG+ LL + +++ TC P + V T+ L+ LP+ ++
Sbjct: 681 GTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQ------- 730
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
Y + G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 731 ---------------YLVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKP 775
Query: 751 WSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 776 VKDLLKKNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 818
>gi|444721114|gb|ELW61867.1| MutS protein like protein 5 [Tupaia chinensis]
Length = 793
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 250/809 (30%), Positives = 396/809 (48%), Gaps = 92/809 (11%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + H +G++YYD+S +H + D S L+ V + P+ + TS K +E
Sbjct: 51 IHLCVLWHSGFLGIAYYDTSDSTVHFMPDTPDHES-LRLLQRVLNEINPRSVVTSAKQDE 109
Query: 63 SFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMM 122
+ L + E + RL+ + + D ++ E+I +L+S++
Sbjct: 110 TMTQFLGK-----------------LGLEISKQRLLSGNYSFIPDSMTATEKILFLSSII 152
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
+ VRA GGLL L RI LE N S+ I + L + +D +
Sbjct: 153 PFDCLLTVRALGGLLKFLGRRRIGVELEDF---NVSVPILGFKKFVLTHLVSIDQDTYSV 209
Query: 183 LQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL LNSRL+
Sbjct: 210 LQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTHDLGELNSRLD 269
Query: 242 AISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVN 299
I FFL + L MA LH L ++K++P + L+ C
Sbjct: 270 VIQFFLLPQNLDMAQMLHRLLGHIKNVPTVYSALG--------------LRDAC------ 309
Query: 300 KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
SL + ++L DI ++ + +L ++ L+ ++D S + T V
Sbjct: 310 --------RSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRFT-VL 355
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI-- 415
E+DE ++ LP FL +VA EL L + +P ++YI IG+L+ I
Sbjct: 356 PNIDPEIDEKKRRLMGLPSFLTDVARKELEDL-----DSRIPSCSVIYIPLIGFLLSIPR 410
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
++ + E ++G +F F ++L Y + +T+ELD LLGD++ +I D E +
Sbjct: 411 LPSMIESSDFE-IEGLDFMFL----SEEKLHYRSARTKELDTLLGDLHCEIRDQETLLMY 465
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQ 534
L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGRH L
Sbjct: 466 QLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPCYSSQLLGVRIQNGRHPLM 525
Query: 535 EMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E+ TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G
Sbjct: 526 ELCARTFVPNSAECCGDRGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEKAEIG 585
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
D+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T DG+ LL
Sbjct: 586 AVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATEQSLVLIDEFGKGTNTVDGLALL 645
Query: 646 GGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
I +++ P + V T+ L+ LP+S +++ TM D D+VF
Sbjct: 646 AAVIRHWLALGPGCPHIFVATNFLSLVQLQLLPQSPLVQYLTM------ETCEDGTDLVF 699
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYK 764
Y++ G A S+ H A AG+P ++ R V + ++ K ++ Q +
Sbjct: 700 FYQVCEGVASASHACHTAAQAGLPDRLVARGKEVSDLIRSGKPIKPVKGLLKENQMDHCQ 759
Query: 765 NAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
V K L D+ DL +F Q++LP+
Sbjct: 760 TLVGKFLKLDLQDPSLDLDVFMSQEVLPA 788
>gi|428169624|gb|EKX38556.1| Msh5 meiosis-specific ZMM crossover interference complex protein,
muts [Guillardia theta CCMP2712]
Length = 605
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 219/639 (34%), Positives = 346/639 (54%), Gaps = 71/639 (11%)
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
+LQI D HPS M GRAKEG S+ +M+ + +GR+LLR W LRPIL + + R +
Sbjct: 3 SLQILCNDIHPSIMINGRAKEGLSLLNLMDNTRSILGRKLLRTWILRPILKQQEITGRQS 62
Query: 242 AISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVN 299
++ FF E EL+ +L + L++VKD+P IL + + S + SDW S+ SL ++
Sbjct: 63 SLRFFTGQENQELLMALQDQLRFVKDVPRILIRMRNSS--ASLSDWINLTTSLKSLSTIH 120
Query: 300 KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
+I + S ++ S I + +ID S+ + + V
Sbjct: 121 EICRNALKSS-------------KQMTSPIMDQ----------VIDFEDSRARKRIS-VA 156
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEK 419
G +ELD+ ++ Y+ L +FLE++A E+ LP + + + +V+ Q+GYL+ F
Sbjct: 157 SGVDEELDQDKRNYDSLGQFLEDIAQQEVDDLPDSMEGLKIS-VVFFPQLGYLV-DFSPI 214
Query: 420 LDDTT---LEQLQGFEFAFSDMDG------ETKRLFYHTPKTRELDNLLGDIYHKILDME 470
LD T Q+ A + G + +++ + + RELD +GDI+ KI D E
Sbjct: 215 LDHETPSMCSQVASPNIANVTIPGMEMHFQTEEYVYWKSQRMRELDENVGDIWGKICDRE 274
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
AI + + F D L+ AA LDC L A++A + NY P + EP++ I++GR
Sbjct: 275 FAIINRVREKLLEFDDELVDTCKVAAALDCILGFAMIAVERNYCEPRIVQEPVIYIEDGR 334
Query: 531 HVLQEMTVDTFIPNDTRIDND---GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H L E+ D FIPN++ I + RI +I+GPNYSGKSIY+KQVALI F++HIG +
Sbjct: 335 HPLCELCTDVFIPNNSIIHENQLGSRIQMISGPNYSGKSIYLKQVALISFMAHIGCW--- 391
Query: 588 DAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+GL D S+ T E +S+F IDL Q+ +M+R +T++SL L+DEFGKGT
Sbjct: 392 ----IGLIDRIFSRIQTRETCAVARSTFAIDLSQIAVMIRCSTTRSLLLIDEFGKGTNAT 447
Query: 640 DGIGLLGGTINYFVT-CDVPPKVLVCTHLTELL-NEGCLPKSERLKFYTMSV---LRPEN 694
DG+ +L TI + ++ P+ +V TH E+ ++G L ++ + TM V +R E
Sbjct: 448 DGVAILAATIKQLDSRKELCPRTIVTTHFNEMFGDKGVLSSCSQISYCTMEVIQCMREEV 507
Query: 695 NSTDVED------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ D +D +VFLY+LV G ++ S G HCA+ AG+P +++RA + NN+ +
Sbjct: 508 MNGDNQDLTQIPKLVFLYKLVQGLSMDSNGYHCAIQAGIPELIVQRAKVIASKLSNNEPI 567
Query: 749 ERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQDL 787
ER+ +N + N K FDV G+++ F +D+
Sbjct: 568 ERFKEDNFRQRAVFIVNLFSK---FDVDAGNIQSFLEDI 603
>gi|344307296|ref|XP_003422318.1| PREDICTED: mutS protein homolog 5 isoform 1 [Loxodonta africana]
Length = 821
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 246/749 (32%), Positives = 378/749 (50%), Gaps = 74/749 (9%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++++ + + +G++YYD+S +H + D + L+ V + PQ I TS K +
Sbjct: 47 EIHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHET-LKLLQRVLDEVNPQSIVTSAKQD 105
Query: 62 ES---FLSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
E+ FL L R + P + + S F E + RL+ + + D ++ E+I +
Sbjct: 106 ENMTRFLGKLASREPAEPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTATEKILF 165
Query: 118 LNSMMDMGS--------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDS 163
L+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 166 LSSVVPFDCLLTTLGFTPTPLLISFQVRALGGLLKFLGRRRIGVELEDY---NVSVPILG 222
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLL 222
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +LL
Sbjct: 223 FKKFVLTHLVSIDQDTYSVLQIFKSESHPSVYKVATGLKEGLSLFGILNRCRCKWGEKLL 282
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIY 280
R WF RP DL LNSRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 283 RLWFTRPTQDLGELNSRLDVIEFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--T 340
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
SDW K++ S L + SL + ++L DI ++ + +L ++ L+
Sbjct: 341 KVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLI 390
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
++D S + T V E+DE ++ LP FL EVA EL L + +
Sbjct: 391 GKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLIGLPSFLTEVARKELETL-----DSRI 444
Query: 401 PC--IVYIHQIGYLMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
P ++YI IG+L+ I F + D +E G +F F ++L Y + +T+E
Sbjct: 445 PSCSVIYIPLIGFLLSIPRLPFMVEASDFEIE---GLDFMFL----SEEKLHYRSARTKE 497
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 498 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYS 557
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP T L + IQNGRH L E+ TF+PN D GR+ +ITGPN SGKSIY+KQV
Sbjct: 558 RPHYTSRLLGVRIQNGRHPLMELCARTFVPNSAECGGDKGRVKVITGPNSSGKSIYLKQV 617
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATS 623
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+ QV + AT
Sbjct: 618 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATE 677
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERL 682
QSL L+DEFGKGT T DG+ LL + +++ + P++ V T+ L+ LP+ +
Sbjct: 678 QSLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPMCPQIFVATNFLSLVQLQLLPQGPLI 737
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
K+ TM D +D+VF Y++ G
Sbjct: 738 KYLTM------ETCEDGDDLVFFYQICEG 760
>gi|426352485|ref|XP_004043743.1| PREDICTED: LOW QUALITY PROTEIN: mutS protein homolog 5 [Gorilla
gorilla gorilla]
Length = 831
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 254/817 (31%), Positives = 410/817 (50%), Gaps = 69/817 (8%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDQES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKH--PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ T H P + + S+ G++N+C G +LLR WF RP DL L
Sbjct: 226 TYS----LDTXTHSIPCPCLVTSSLPALSLTGVLNRCRCKWGEKLLRLWFTRPTHDLGEL 281
Query: 237 NSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSIC 293
+SRL+ I FFL + L MA LH L ++K++P ILK+ +T SDW K++
Sbjct: 282 SSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---LSHTKVSDWQVLYKTVY 338
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
S L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 339 SALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAEN 388
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+
Sbjct: 389 RFT-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGF 442
Query: 412 LMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
L+ I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 443 LLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQE 498
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNG 529
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNG
Sbjct: 499 TLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNG 558
Query: 530 RHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
RH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+
Sbjct: 559 RHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAE 618
Query: 589 AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T D
Sbjct: 619 EAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVD 678
Query: 641 GIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ LL + +++ TC P + V T+ L+ LP+ +++ TM
Sbjct: 679 GLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETC 729
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
D D+VF Y++ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 730 EDGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLK 789
Query: 757 SAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
Q + + V+K + D+ DL +F Q++LP+
Sbjct: 790 KNQMENCQTLVDKFMKLDLEDPNLDLNVFMSQEVLPA 826
>gi|58258859|ref|XP_566842.1| meiotic recombination-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107005|ref|XP_777815.1| hypothetical protein CNBA5130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260513|gb|EAL23168.1| hypothetical protein CNBA5130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222979|gb|AAW41023.1| meiotic recombination-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 937
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 243/779 (31%), Positives = 389/779 (49%), Gaps = 89/779 (11%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK--RS 71
+ ++YD R++ VLE +D+ ++ L +V Q +P +I STK++ S + ++ R
Sbjct: 98 LAAAWYDPEERKIQVLEDTKDT-LNWDLACLVIEQVRPTLIIVSTKTQNSLMEKIEEYRD 156
Query: 72 DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSI-------------------- 111
+ E + L+ S S + A +L +RV+ LS+
Sbjct: 157 ENKCE---LLLLPSRSCSPKAASIQLASVRVSDSSVTLSVCRAEEQSAHEPRNGSAIEDA 213
Query: 112 ------------KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI 159
+ + L M++ + + A+G L+ ++ R ++ + ++ N +
Sbjct: 214 NWRDEGAGMGTYRLSLVKLGCWMNINAPLATVAAGILVEQVKKGRTMEAMPGEQHFNG-L 272
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
+ + + L + ++++ A +L IF + H + M + K+ S+FG ++ VTP+G+
Sbjct: 273 ELTVLESMDLERHMQINKDALTSLAIFDVESH-AFMYSEQNKQALSIFGKLDSTVTPLGK 331
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPS 277
+LL W LRP+LDL +++R +A+ FF +E +M SL +T+K V+++P K +
Sbjct: 332 KLLHTWHLRPLLDLSEISARHDAVEFFSSAENAPIMTSLRKTMKGVRNVPAHCTKLQTGR 391
Query: 278 FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
Y +W + ++ + L + F GI+ + I EK + L
Sbjct: 392 GSYV--EWKCLVDALTAALEIRN-FMCGIATPV-------PLPIAEKIRETVRDNLIIFC 441
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+ + +ID + S+ + VR G DELD R+IY L L +VA + Q+P
Sbjct: 442 QDMNAVIDWDASRLESR-VAVRPGVDDELDSWREIYAGLDVTLNQVALMIYSQVPPGISS 500
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+VY+ Q+GYL I + D ++ G+E F D R +Y T + +LD+
Sbjct: 501 SV--NVVYLPQLGYLAVI---QADADEPPEIPGWESRFHTED----RYYYKTVEMEDLDD 551
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
GD+Y ++ E I + LV H+ + +L+ V+ AELDC L+LA A RPI
Sbjct: 552 HFGDLYTLMIGKEIEIIQRLVEHLKGYETSILRTVDTIAELDCILALARAARDFGLKRPI 611
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDG-----RINIITGPNYSGKSIYIKQV 572
+T EP+L I+ GRH+L E V +I NDT I + G + IITG N SGKS Y KQV
Sbjct: 612 MTEEPVLQIRGGRHILYESLVPRYIENDTMIASGGVNGLASMMIITGANGSGKSAYGKQV 671
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
AL+ F++ IGSFVPAD A +G+ D + + S+FMIDL QV LR AT
Sbjct: 672 ALMAFMAQIGSFVPADGARIGICDKIFTRLQTRESTSRHASAFMIDLGQVSQALRGATRH 731
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL-----LNEGCLPKS 679
SL ++DEFGKGT DG GLL GT+ Y + V P+ +V TH EL + E LP
Sbjct: 732 SLIIMDEFGKGTHPADGAGLLAGTVEYLLQ-GVCPRSIVMTHFHELFANHFITEDRLP-- 788
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++F M L + D +DI +LY+LVP +L S CAL G+P ++ RA V
Sbjct: 789 --VRFCHMKTLL----TNDSDDIHYLYKLVPSLSLTSNAAECALRHGIPKNIVDRAQEV 841
>gi|119623913|gb|EAX03508.1| mutS homolog 5 (E. coli), isoform CRA_c [Homo sapiens]
Length = 758
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 234/707 (33%), Positives = 370/707 (52%), Gaps = 55/707 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSDGT-TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+S++ + VRA GGLL L RI LE N S+ I + L + +D
Sbjct: 169 SSIIPFDCLLTVRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFMLTHLVNIDQD 225
Query: 179 AHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
+ LQIF+++ HPS + KEG S+FG++N+C G +LLR WF RP DL L+
Sbjct: 226 TYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEKLLRLWFTRPTHDLGELS 285
Query: 238 SRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYT-ASDWTAFLKSICS 294
SRL+ I FFL + L MA LH L ++K++P ILK+ +T SDW K++ S
Sbjct: 286 SRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---LSHTKVSDWQVLYKTVYS 342
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + SL + ++L DI ++ + +L ++ L+ ++D S +
Sbjct: 343 ALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENR 392
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYL 412
T V E+DE ++ LP FL EVA EL L + +P ++YI IG+L
Sbjct: 393 FT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFL 446
Query: 413 MCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + + + ++ G +F F ++L Y + +T+ELD LLGD++ +I D E
Sbjct: 447 LSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQET 502
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGR 530
+ L + + L + ++ A+ LD L+LA A Y RP + + L + IQNGR
Sbjct: 503 LLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGR 562
Query: 531 HVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
H L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+
Sbjct: 563 HPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEE 622
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +G D+ + ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG
Sbjct: 623 AEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDG 682
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
+ LL + +++ TC P + V T+ L+ LP+ +++
Sbjct: 683 LALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQY 726
>gi|321249629|ref|XP_003191516.1| meiotic recombination-related protein [Cryptococcus gattii WM276]
gi|317457983|gb|ADV19729.1| Meiotic recombination-related protein, putative [Cryptococcus
gattii WM276]
Length = 935
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 247/788 (31%), Positives = 397/788 (50%), Gaps = 93/788 (11%)
Query: 9 LHGHRVG---VSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFL 65
LHG +G ++YD R++ VLE +D+ ++ L +V Q +P +I ST+++ S +
Sbjct: 89 LHGPFMGNLAAAWYDPEARKIQVLEDTKDT-LNWDLACLVIEQVRPTLIIMSTRTQNSLM 147
Query: 66 SALKRSDGTTEA-------------------PTVKLVKSSI-----FSYEQAWHRLIYLR 101
++ G E +V+ +S+ + EQ+ +
Sbjct: 148 DKVEEYRGQNECELLLLSSRSCCPKAASIHLASVRFSDTSVTPPVCHAEEQSAYDESRSG 207
Query: 102 VTGMDDG-------------LSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDT 148
VT +DDG LS+ + C++N + + + A+G L+ ++ R ++
Sbjct: 208 VT-VDDGGWRDEGAGMGTYRLSLVKLGCWMN----INAPLATVAAGVLVEQVKKGRTMEA 262
Query: 149 L--EQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
+ Q +G I ++S+ L + ++++ +L IF + H + M + K+ S+
Sbjct: 263 MLGGQHLNGLELIALESM---DLERHMQINKDTLTSLAIFDVESH-AFMYSDQDKQALSI 318
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVK 264
FG ++ VTP+G++LL W LRP+LDL +++R NA+ FF +E MASL + +K V+
Sbjct: 319 FGKLDSTVTPLGKKLLHTWHLRPLLDLAEISTRHNAVEFFSSAENAHFMASLRKAMKGVR 378
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
++P K + Y ++W + ++ + L + F G++ + + IVEK
Sbjct: 379 NVPAHCTKLQTGRGSY--AEWKCLVDALTAALEIRN-FMCGVTTPV-------SLPIVEK 428
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
IT L + + +ID + S+ + VR G DELD R++Y L L +VA
Sbjct: 429 IRETITDNLIIFCQDMNAVIDWDASRLERR-VAVRPGVDDELDNWREVYAGLDATLNQVA 487
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
+ Q+P +VY+ Q+GYL I + D ++ G+E F D R
Sbjct: 488 LMIYPQVPPGISSSV--NVVYLPQLGYLAVI---QADADEPPEILGWESRFHTED----R 538
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
+Y T + ++LD+ GD+Y ++ E I + LV H+ + +L+ V+ AELDC L+L
Sbjct: 539 YYYKTVEMKDLDDHFGDLYTLMIGKEIEIIQRLVEHLKDYEVSILRTVDIIAELDCILAL 598
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDG-----RINIITG 559
A A RP++ EP+L I+ GRH+L E V +I NDT I + G + IITG
Sbjct: 599 ARAARDLGLKRPVMIEEPVLQIRKGRHILFESLVPRYIQNDTMIASGGIDGLASMMIITG 658
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDL 611
N SGKS Y KQVAL+VFL+ IGSFVPA+ A +G+ D + + S+FMIDL
Sbjct: 659 ANGSGKSAYGKQVALMVFLAQIGSFVPAEEAVIGICDKIFTRLQTRESTSRHASAFMIDL 718
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELL 671
QV LR AT SL ++DEFGKGT DG GLL GTI Y + V P+ +V TH EL
Sbjct: 719 GQVSQALRGATRHSLIIMDEFGKGTHPADGAGLLAGTIEYLLQ-GVCPRSIVMTHFHELF 777
Query: 672 NEGCLPKSE-RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
+ + ++F M L + D + + +LY+LVP +L S CAL G+P
Sbjct: 778 ANHFITEDRLSVRFCHMKTLLMD----DSDGVQYLYKLVPSLSLTSNAAECALRHGIPRR 833
Query: 731 VIKRAAYV 738
++ RA V
Sbjct: 834 IVDRAKEV 841
>gi|66809321|ref|XP_638383.1| hypothetical protein DDB_G0284747 [Dictyostelium discoideum AX4]
gi|60466984|gb|EAL65026.1| hypothetical protein DDB_G0284747 [Dictyostelium discoideum AX4]
Length = 880
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 224/691 (32%), Positives = 361/691 (52%), Gaps = 52/691 (7%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
+A ++GV+YYD +++ + WED N F ++ +K P++I ++ + F
Sbjct: 55 LAVFYQDLKIGVAYYDRLESNIYLCQCWEDEN--FSCLNSIKQLINPKVIIIPSRMPQKF 112
Query: 65 LSALKR----SDGTTEAPTVK-----LVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERI 115
+ + R S+ E T K + S F++E + +RL+ L+++ M + + +
Sbjct: 113 IDNILRNLDDSNENNEKQTSKNTQYHYSRFSDFTFESSKNRLLNLKLS-MCNTNNTTIKY 171
Query: 116 CYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
+L ++ + + +RA GGLL+ L ++D + ++ + I+ + ++LN++L L
Sbjct: 172 TFLQNVFNFDNIEMIRAVGGLLSYLSKYILLDDFDSLDN----LIINEICPITLNQYLLL 227
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D +LQIF HPS G +KEG S+FG+ +K T MG++LL+ WF+RP +
Sbjct: 228 DNNTLFSLQIFSNQNHPSCYSFGNSKEGLSLFGLFDKTKTTMGKKLLKTWFMRPSRNRFV 287
Query: 236 LNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ R N I FF E L L + LK +KD+ IL + +S + D+ + K+
Sbjct: 288 IEERQNLIQFFSSQENSSLKFELLDNLKNIKDLKIILSRISSSQ--NPSKDFISIYKTFH 345
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L + + SE ++K + L +Y+ I ++
Sbjct: 346 YFLKIKLLIVPKNSE----------LPFLKKLNNLYPQSLVNIYQKFESIFFFADQDDQR 395
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGY 411
+REG +ELD+LR +Y + E L E LE V+ +L ++ +VY Q+G
Sbjct: 396 IS--IREGVDEELDQLRNVYLSMDEILTEHGELERVKFTNL---TWITSFHLVYYPQLGC 450
Query: 412 LMCI-FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
L+CI EE + + F F + L++ KT+ELD+ GDI++ ILD++
Sbjct: 451 LICIPIEESIAIGNQINIPSLSFIFK----TSSYLYFQNQKTKELDDFFGDIHNDILDIQ 506
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNG 529
I +++V I S ++ N+ +LDC LSLA + ++PI++ E ++IQ+G
Sbjct: 507 SRIEKEVVDEIMSNSGSIIDLCNYCTQLDCILSLASCVQAYDLVKPIISTEQQEIEIQSG 566
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH++QE V FIPNDT+ D + I++GPN SGKSIYIKQVALIVFL IGS+VPA +
Sbjct: 567 RHLIQEYCVTNFIPNDTQNDPTKPVVIVSGPNQSGKSIYIKQVALIVFLGQIGSYVPAKS 626
Query: 590 ATVGLTD-------SKHMTA-EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
AT+ L D S+ A +SSFMID Q+ M R ATS+SL ++DE+GKGT DG
Sbjct: 627 ATISLFDHIYTRISSRESNAISESSFMIDCKQIAQMTRFATSRSLLIIDEYGKGTNPLDG 686
Query: 642 IGLLGGTINYFVT-CDVPPKVLVCTHLTELL 671
I LL G + + +T PK +CTH E
Sbjct: 687 ISLLYGLLVFLLTKSPSTPKTFICTHFYEFF 717
>gi|397523148|ref|XP_003831603.1| PREDICTED: mutS protein homolog 5 isoform 3 [Pan paniscus]
Length = 822
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 241/748 (32%), Positives = 378/748 (50%), Gaps = 77/748 (10%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL L+SRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH- 344
Query: 279 IYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE 338
SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 345 -TKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIAS 393
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 394 LIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPNFLTEVARKELENL-----DS 447
Query: 399 FVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+EL
Sbjct: 448 RIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKEL 503
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
D LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y R
Sbjct: 504 DALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYSR 563
Query: 516 PILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVA 573
P + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 564 PRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVG 623
Query: 574 LIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+ QV + AT+Q
Sbjct: 624 LITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQ 683
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 684 SLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGP 740
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRL 708
+++ TM D D+VF Y++
Sbjct: 741 LVQYLTM------ETCEDGNDLVFFYQV 762
>gi|262231786|ref|NP_079535.4| mutS protein homolog 5 isoform a [Homo sapiens]
gi|26996739|gb|AAH41031.1| MSH5 protein [Homo sapiens]
gi|119623916|gb|EAX03511.1| mutS homolog 5 (E. coli), isoform CRA_d [Homo sapiens]
Length = 822
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 242/749 (32%), Positives = 380/749 (50%), Gaps = 79/749 (10%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL L+SRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---L 342
Query: 279 IYT-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 343 SHTKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 392
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----D 446
Query: 398 MFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+E
Sbjct: 447 SRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKE 502
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 503 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYS 562
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 RPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQV 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLH-QVGMMLRQATS 623
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+ QV + AT+
Sbjct: 623 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATA 682
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKS 679
QSL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 683 QSLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQG 739
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
+++ TM D D+VF Y++
Sbjct: 740 PLVQYLTM------ETCEDGNDLVFFYQV 762
>gi|119623911|gb|EAX03506.1| mutS homolog 5 (E. coli), isoform CRA_a [Homo sapiens]
gi|119623914|gb|EAX03509.1| mutS homolog 5 (E. coli), isoform CRA_a [Homo sapiens]
gi|119623924|gb|EAX03519.1| mutS homolog 5 (E. coli), isoform CRA_a [Homo sapiens]
Length = 775
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 235/724 (32%), Positives = 370/724 (51%), Gaps = 72/724 (9%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 50 IHLCVLWNSGYLGIAYYDTSDSTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 108
Query: 63 S---FLSALKRSDGT-TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + S F E + RL+ + + D ++ E+I +L
Sbjct: 109 NMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDAMTATEKILFL 168
Query: 119 NSMMDMGS-----------------EVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
+S++ QVRA GGLL L RI LE N S+ I
Sbjct: 169 SSIIPFDCLLTPPGDLRFTPIPLLIPSQVRALGGLLKFLGRRRIGVELEDY---NVSVPI 225
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA-KEGFSVFGMMNKCVTPMGRR 220
+ L + +D + LQIF+++ HPS + KEG S+FG++N+C G +
Sbjct: 226 LGFKKFMLTHLVNIDQDTYSVLQIFKSESHPSVYKVASGLKEGLSLFGILNRCHCKWGEK 285
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSF 278
LLR WF RP DL L+SRL+ I FFL + L MA LH L ++K++P ILK+
Sbjct: 286 LLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMK---L 342
Query: 279 IYT-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T SDW K++ S L + SL + ++L DI ++ + +L ++
Sbjct: 343 SHTKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDDLHHIA 392
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
L+ ++D S + T V E+DE ++ LP FL EVA EL L +
Sbjct: 393 SLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMGLPSFLTEVARKELENL-----D 446
Query: 398 MFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+P ++YI IG+L+ I + + + ++ G +F F ++L Y + +T+E
Sbjct: 447 SRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLDFMFL----SEEKLHYRSARTKE 502
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LLGD++ +I D E + L + + L + ++ A+ LD L+LA A Y
Sbjct: 503 LDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARDYGYS 562
Query: 515 RPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
RP + + L + IQNGRH L E+ TF+PN T D GR+ +ITGPN SGKSIY+KQV
Sbjct: 563 RPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQV 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV + AT+Q
Sbjct: 623 GLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATAQ 682
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSE 680
SL L+DEFGKGT T DG+ LL + +++ TC P + V T+ L+ LP+
Sbjct: 683 SLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC---PHIFVATNFLSLVQLQLLPQGP 739
Query: 681 RLKF 684
+++
Sbjct: 740 LVQY 743
>gi|242009271|ref|XP_002425413.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509230|gb|EEB12675.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 810
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 236/767 (30%), Positives = 379/767 (49%), Gaps = 63/767 (8%)
Query: 1 MQVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
+ V ++ ++G +YY + ++H+L D + DF + + Q P II T +
Sbjct: 70 LDVLLSVFWKRGKLGAAYYTHADAEIHLLNDIVDVHPDFINLKTLISQVNPSIIITCGGA 129
Query: 61 EESFLSALKR--------SDGTTEAPTVKLV--KSSIFSYEQAWHRLIYLRVTGMDDGLS 110
ESF L +G E + + ++ SYE + L+ L
Sbjct: 130 SESFTECLNNIANKNSESENGIEEWKKIFFMSNRNKDLSYESCKRYISGLKFGFEPSNLG 189
Query: 111 IKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLN 170
++ I ++ S +D+ E + + G L+ LE L + + S I V ++LN
Sbjct: 190 EEDHILFIQSHIDLNQEAMIISMGILIKYLEK-----YLPEINLTHDSFQIAYVSYITLN 244
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGI----GRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+ +D + ALQIF HPS G +E FS+FG+ N+C T G + +R F
Sbjct: 245 TRVFIDEHTYRALQIFNPSVHPSAFKRNTVGGYGREDFSLFGLFNRCKTKAGGKKMREIF 304
Query: 227 LRPILDLENLNSRLNAISFFLCS--EELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
+ P ++E LN RL+A+ F S + ++ ++ +K V++I IL +
Sbjct: 305 MNPSKNIEELNERLDAVEFCFKSKHQHIVQNIINHMKKVENISIILANMCRTRM--NINQ 362
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
W + S+ + + V +I E S S ++EK A +T+ + V + +I
Sbjct: 363 WRSLYTSLYNAILVGEICEKFTSHS----------KLLEKVAKSVTSNIHEVIHYMSQVI 412
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D S K + T VR G ++LD L+Q Y E+P+ L +VA +EL LP + + I+
Sbjct: 413 DFEESILKNHFT-VRRGIDNKLDLLKQTYAEIPDVLVKVAEMELENLPTIINQC---SII 468
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE---TKRLFYHTPKTRELDNLLGD 461
YI ++GYL+ + K D + E+ + D + + Y TP ELDN+LGD
Sbjct: 469 YITELGYLLSVPVWKGDGCDVS-----EYTLPNCDVKFIVNNYVHYKTPHCVELDNVLGD 523
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
I D+E I L+ I + +L + + +ELDC ++ A +A +NNY RP LTL+
Sbjct: 524 TVASISDLESKIMITLIQLIQSKTSDILILLKYISELDCVIAFATIALENNYHRPELTLD 583
Query: 522 PLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSH 580
L I NGRH LQE+ VD F+PND D + + I I+TGPN SGKS+Y+KQ ALI FL+H
Sbjct: 584 RKLKIINGRHPLQEICVDNFVPNDLSFDTENKFIKILTGPNASGKSVYLKQTALITFLAH 643
Query: 581 IGSFVPADAATVGLTDSKH--------MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPA +A + + D H ++ S F++DL Q+ + +T +SL ++DEF
Sbjct: 644 IGSFVPAQSAQICIFDYIHSRIQTLESISTRMSGFLVDLKQMTYSIYNSTPKSLIVIDEF 703
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLR 691
GKGT DG+ LL ++ +F+ + P +LV TH L L+ M L
Sbjct: 704 GKGTTEIDGLSLLAASLIHFLERESKCPYILVSTHFHSLPKLLPPSPLVDLQ--CMDYL- 760
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ E+I++LY++ G + LS L A AG+ + ++R+ V
Sbjct: 761 -----IENEEIIYLYKVKNGVSGLSLTLLAAKTAGLSDDALRRSIEV 802
>gi|281211138|gb|EFA85304.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 1054
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 231/756 (30%), Positives = 382/756 (50%), Gaps = 96/756 (12%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
+A I ++G++YYDS++ L+V E WED F + +VK Q P+ I ++ E F
Sbjct: 353 LAVIYFKLKLGIAYYDSNLSILYVSECWEDDT--FTCLSMVKQQVCPKTIIIPSRMPEKF 410
Query: 65 LSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMD 123
+ A+ K +G ++ V KS+ FS++ ++L+ +++ D ++ YL ++D
Sbjct: 411 IDAVHKMEEG--QSFNVHFSKSNDFSFDNGKNKLLNIKLPI--DSNDFHQKQLYLERILD 466
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
++A GGLL L +D E E+ ++ +I S ++FL ++ + +L
Sbjct: 467 FSQSEMIKAIGGLLVYLPKYLALDEFETLEN----FKLNEIICFSFDQFLSINTNSLYSL 522
Query: 184 QIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI 243
QIF +K S +G+R L++WF+RP + E + R + I
Sbjct: 523 QIFANEKTKS----------------------VIGKRKLKSWFMRPPRNREIIEERYDLI 560
Query: 244 SFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
S+F + L SL L +KD+ IL K N + + +L +I + L
Sbjct: 561 SYFTDNSNTPLTLSLVGCLSNIKDLHMILNKLN------LSQNPERYLINIYTSLQ--SF 612
Query: 302 FEVGISESLREQLRLLNF--DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
+GI + + ++F IV + I T L YE I D++++ ++
Sbjct: 613 LRIGIL--IEQNSPTISFLVKIVTLSLEPIIT-LLQQYENTFIIDDLHKNVLN-----IK 664
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLE---LVQLPHLCKEMFVPCIVYIHQIGYLMCI- 415
G +LD+LR++Y + L + E +P + FV Y Q+G L+C+
Sbjct: 665 YGIDSQLDKLREVYNSMGSILTQSGEEEKSYFGGIPWITSFHFV----YYPQLGCLICVP 720
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ L+G +F F ++ +++ KT+ELD+ GDI++ ILD+E I R
Sbjct: 721 INPNYPLPQQKDLKGLDFIFQ----TSQYIYFQNQKTKELDDYFGDIHNDILDIEGRIQR 776
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
++ I S+ L++ N+ +ELD +S+A+V+ ++N++RP + E +L+I+NGRH LQE
Sbjct: 777 VVIDEILKISNALIEVSNYCSELDAIISMAIVSKESNFVRPTINSESILEIKNGRHPLQE 836
Query: 536 MTVDTFIPNDTRI----------DNDGRIN---------IITGPNYSGKSIYIKQVALIV 576
+ +TFIPNDT + D ++ IITGPN SGKSIY+KQV +IV
Sbjct: 837 LCTNTFIPNDTELTGKYKYITINSKDSQLTNLSESKSTMIITGPNQSGKSIYLKQVGIIV 896
Query: 577 FLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
+L+H+G FVPA++A + L D + + +SSFMID QV M + ATS SL L
Sbjct: 897 YLAHLGCFVPAESANISLCDKIFTRISTRESNSISESSFMIDCKQVAQMTKFATSNSLLL 956
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
+DE+GKGT+ +DGI LL G I +F+ D PK+L+ TH E+ ++R+ F +
Sbjct: 957 IDEYGKGTIPQDGISLLYGLIIHFIVKDRSPKILLSTHFYEIFKLISEKHADRISFNSTQ 1016
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
L + NS +I F +P L Y L C +L
Sbjct: 1017 FLIEKANSNTNNNITF-DTFIP---LYKYNLVCLML 1048
>gi|396462322|ref|XP_003835772.1| hypothetical protein LEMA_P051130.1 [Leptosphaeria maculans JN3]
gi|312212324|emb|CBX92407.1| hypothetical protein LEMA_P051130.1 [Leptosphaeria maculans JN3]
Length = 953
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 237/801 (29%), Positives = 396/801 (49%), Gaps = 91/801 (11%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
VG SYY + ++ +E N D +ID ++ +P +I STK ++S ++
Sbjct: 102 VGCSYYVARDEKMFFMEDIPFGNVD--IIDTLRLSIEPTVILVSTKIDDSVINRFDPEGR 159
Query: 74 TTEAPTV-----------KLVKSSIFSYEQAWHRLIYLRVTGMD---------------- 106
++ +V ++ S F Y+ A +L L++ G +
Sbjct: 160 NDDSASVDNDQFRLPFLLEVRPPSEFYYDAAKSKLQSLQLEGTEVSQISFNVSSELPAAH 219
Query: 107 -----DGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITI 161
D + ++ L ++D+ S V V +G L++ L+ R L S +
Sbjct: 220 QFNDGDTFGQQGQLLRLAGLIDLESRVTVGCAGALISYLQRRRAAAYLPGDHSAYLMFRV 279
Query: 162 DSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGR------AKEGFSVFGMMNKCV- 214
++ SL + ++A +LQI + HP G AKEG SV+G+ ++
Sbjct: 280 TTLGMFSLRDTMFINADTLHSLQILDAESHPHSHNRGPTKSSSGAKEGLSVYGLFHRLAR 339
Query: 215 TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC--SEELMASLHETLKYVKDIPHILKK 272
T GR LLR +FLRP L+++ +N RL+ + + +E + L + LK + ++ +L
Sbjct: 340 TSQGRTLLRQYFLRPSLNIDMINERLHTVGVLVRPENESALQDLGQNLKNIGNMRIVLMN 399
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT- 331
T S + +++ + F + I ++L++ L + I +K +
Sbjct: 400 LKKGVSGSTQS-RSGLSRTVWVAIRTFSFFALKIKDALQDVLGEDHLPIRDKVFENFESY 458
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
LA + + ID++RS E+ T++ G +ELD++++ + L L EVA+ +
Sbjct: 459 HLAQIGRKLSETIDLDRSAEESR-TVILTGVDEELDQMKRTLDGLGSLLNEVAAKLSEMM 517
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL--QGFEFAFSDMDGETKRLFYHT 449
P + ++Y QIG+L+ + +D TT ++ GFE + M ++++ +
Sbjct: 518 PSDLRAAL--NVIYFPQIGFLVTV---PIDPTTGSEVYDGGFESQWERMFATEDQVYFKS 572
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
+TRE+D+ GD+Y I D E I+ +L H+ + + + + ELD ++LA A
Sbjct: 573 SETREMDDHFGDVYGIISDREIEISHELAQHVLQYEELITTCSDICGELDSLVALAQGAK 632
Query: 510 QNNYMRPILTLEPLLDIQNGR--HVLQEMTVDTFIPNDT----RIDNDGRIN-------- 555
Q RP +T + +L I+ GR H+LQE+TV +F+PNDT I D R
Sbjct: 633 QYRLCRPRVTHDNVLQIKGGRESHILQELTVSSFVPNDTLLVGGIGRDARSGHDTDIPRL 692
Query: 556 -----------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMT 601
++TGPNYSGKS+Y+KQVALIVF++H+G FVPAD+A +GLTD S+ T
Sbjct: 693 TGSTHELPSMLVLTGPNYSGKSVYLKQVALIVFMAHVGCFVPADSADIGLTDKILSRVTT 752
Query: 602 AE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
E QS+FMIDL Q+ + L AT +SL ++DEFGKGT + DG GL + + ++
Sbjct: 753 RETVSRAQSAFMIDLQQISLALSLATRRSLLIIDEFGKGTESSDGAGLACAVMEHLLSLG 812
Query: 657 VP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHAL 714
PKV+ TH E+ G L L F M V R + ++++V D I +LY+ G +
Sbjct: 813 PERPKVIGATHFHEIFELGHLDPRPSLAFGHMEV-RIDTDASEVNDQITYLYK--NGRST 869
Query: 715 LSYGLHCALLAGVPAEVIKRA 735
S+G CA + GVP E+I+RA
Sbjct: 870 SSFGTCCADINGVPPEIIQRA 890
>gi|452819942|gb|EME26992.1| DNA mismatch repair protein MutS [Galdieria sulphuraria]
Length = 849
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 238/733 (32%), Positives = 375/733 (51%), Gaps = 63/733 (8%)
Query: 60 SEESFLSALKRSDGTTEAPTVKL--VKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
S++S +S SD A KL + S FS +QA + + G+ S + ++
Sbjct: 96 SDKSDISQKPYSDLLEIAKPFKLEFLSYSFFSTKQALSTFEQVVILGIPQEASKEAKMAQ 155
Query: 118 LNSMMDMGSEVQVRAS-GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
L ++D + A+ GL + ++ +V T + + I+S+ VSLN LK+D
Sbjct: 156 L-GLLDQNLPSSILAALAGLFSYIQKAGVVYTYK------GLLNINSINIVSLNDMLKID 208
Query: 177 ATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
++ A QI +++ HP MG G +KEG SVF +M++ + GR+LL+ W L+P +L +
Sbjct: 209 YSSLMAFQILKSEIHPKMMGDGHSKEGLSVFNIMDRTSSFQGRQLLKTWLLQPCKNLNII 268
Query: 237 NSRLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSI 292
R +S+ + C+ EL+ + L+ ++++P I + ++ Y AS DW+ S
Sbjct: 269 QFRQRVVSWLVNNCNMELLREISNHLRGIRNVPKITSRISN----YAASIVDWSNLRTST 324
Query: 293 CSLL---------HVNK---IFEVGISESLREQLRLLNFDIVEKA--ASCITTELAYVYE 338
S++ H+ K I EV S + +LLNF V + +L +
Sbjct: 325 RSIIWLFDFVRNTHLAKESVILEVEFSN--MDIGKLLNFQQVLSIFYNDAVFDDLRNILS 382
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
+ +++ SK +G V +G+C++LD R Y L E L EV S E+ +L L +
Sbjct: 383 WIERVLNFKESKLQG-RIYVNDGYCEDLDNARCFYYSLEEHLTEVGSNEIERLDALGVHI 441
Query: 399 FVPCIVYIHQIGYLMCIFEE----------KLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+ YI ++GYL+ +E LD T + E AFS D ++Y
Sbjct: 442 PWIKVTYIPRLGYLLATGKEDNESRGDTIGSLDLTVQSYAKDLELAFSTSD----TVYYK 497
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
T RELD LGDI+ IL++E L + L K A+ DCF+S+AL A
Sbjct: 498 TSTMRELDEKLGDIFDTILELENECLHVLEQQVIPLLPMLYKCSKQTAQFDCFISMALTA 557
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRIDNDGRINIITGPNYSGKSI 567
Q + P +T I++GRH L E+ F+ NDT + + I+TGPNYSGKS+
Sbjct: 558 IQYQWCEPSVTKNRGYVIKSGRHPLYELNSKVEFVANDTAATMNS-LYIVTGPNYSGKSV 616
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLR 619
Y+KQ+ALIV+L+HIGSFVPA A + LTD ++ SSF +D QV MMLR
Sbjct: 617 YLKQIALIVYLAHIGSFVPAKEAQIALTDQIQTRIQTEDSISLHLSSFFLDCTQVAMMLR 676
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPK 678
+T+QSL ++DEFGKGT+ +G+ LL T+ + D P V TH+ ++L G + K
Sbjct: 677 TSTNQSLLVIDEFGKGTMASNGMALLSATLLTLLEMKDKMPTVFCATHMYDILTNGIISK 736
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG-HALLSYGLHCALLAGVPAEVIKRAA 736
S E++ +M + + + E ++ LYR+VPG + SY +HCA +G+P V++RA
Sbjct: 737 SNEQVSIMSMECIFERDTHLERE-LIPLYRVVPGLLSTESYAVHCAAKSGIPMYVLQRAI 795
Query: 737 YVLEAAQNNKHVE 749
V Q N+ +E
Sbjct: 796 EVQTCLQKNETLE 808
>gi|347837601|emb|CCD52173.1| hypothetical protein [Botryotinia fuckeliana]
Length = 985
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 252/851 (29%), Positives = 393/851 (46%), Gaps = 108/851 (12%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
+V MA L G VG +YY + R+ + + + S + +ID +K P +I ST+
Sbjct: 99 EVVMAVELKGRGTVGCAYYLA--REEKLCMMADISMAGLDIIDTLKVHVDPTVILISTRC 156
Query: 61 EESFLSALKR-SDGTTEAPTVKLVKSSI--------FSYEQAWHRLIYLRVTGM------ 105
EE+ L++ + G + S I F YE A ++L L + G
Sbjct: 157 EEALEDHLQKDAKGIDRGDANDIFGSYILDSRPASEFYYETAKNKLASLGIEGPWGAEMI 216
Query: 106 ------------------DDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVD 147
G + R L +D+ S + V +G +L L R VD
Sbjct: 217 LATPSDELAGNHTHDQADSAGKGRQGRFMRLAGWIDLESRISVGCAGAVLNYLGRRRSVD 276
Query: 148 TLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHM-----GIGRAK 201
L E+ + + ++ SL + ++A +LQI Q++ HP SHM +K
Sbjct: 277 YLPNDEAALIAFRVRTIKMFSLMDMMFVNADTLSSLQIIQSESHPNSHMQGPNKSTSGSK 336
Query: 202 EGFSVFGMM-NKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHE 258
E SVFG+ + TP GR+ LR F+RP +D+ + RL I FL E ++ + +
Sbjct: 337 ESLSVFGLFYHLASTPQGRQKLRKMFMRPSMDITVIKERLLTIGIFLLPENGPVLQEIQK 396
Query: 259 TLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
+L+ VKDI H+ K + S TA + + H KI E L
Sbjct: 397 SLRNVKDIRTVVIHLQKGISGGSAKATAVKSGVWGSILSFTYHSLKILEA---------L 447
Query: 315 RLLNFDIVEKAASCI----TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
R L D + + +L + + + I+ RS E+ + VR+G ELD ++
Sbjct: 448 RGLAGDKTIISGKLLGETRPNDLLSIGQAITETINFERSVEQ-HRVTVRQGVDPELDGMK 506
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
+ Y+ + L +V +P ++ CI Y Q+G+L + +LD T E
Sbjct: 507 RTYDGMESLLTKVQQKMSDDIPEWARQYVENCI-YFPQLGFLTVV---QLDPNTGEGKYK 562
Query: 431 FEFAFSDMDGET----KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
E D +T ++++Y RE+D +GD+Y I D E I L + +
Sbjct: 563 GERTDEDEWSQTFVSDEKVYYKNKHMREMDEYIGDMYSMITDREIEIIHHLTVRVLEHEN 622
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT 546
L+ + ELD ++LAL A + + P +T ++DI+ GRH LQE+TV +++PND
Sbjct: 623 LLIAVSDLCGELDSLVALALGAIKYRFNPPTITHANVIDIRGGRHPLQELTVPSYVPNDC 682
Query: 547 RI--------------DNDGRIN----------IITGPNYSGKSIYIKQVALIVFLSHIG 582
+ + R N ++TGPNYSGKS+Y+KQ ALIV+L+HIG
Sbjct: 683 YLVGGSGSPIPINQEPSSSNRQNWEGTEGPSMLLMTGPNYSGKSVYLKQTALIVYLAHIG 742
Query: 583 SFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
S+VPAD A VGLTD + ++ QS+FMIDL Q+ + AT +SL ++DEFGK
Sbjct: 743 SYVPADKAVVGLTDKMLTRITTRESVSRNQSAFMIDLQQIALCTTLATHRSLVVIDEFGK 802
Query: 635 GTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
GT + DG GL G YF+ D PKVL TH E+ G L L F M V
Sbjct: 803 GTNSTDGAGLACGVFEYFLGLDSHRPKVLGATHFHEIFENGYLSPRSELAFGHMDVH--V 860
Query: 694 NNSTDVED--IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERW 751
N +D+ D +++LY V G + S+G CA + G+ +++RA ++ A + + +
Sbjct: 861 NRQSDLPDNQVIYLYNFVLGRSTSSFGTSCAAMNGIDPAIVERAEDLILLAARGEDLMQA 920
Query: 752 SHENISAQDQQ 762
N S +D Q
Sbjct: 921 VAANASERDAQ 931
>gi|156053089|ref|XP_001592471.1| hypothetical protein SS1G_06712 [Sclerotinia sclerotiorum 1980]
gi|154704490|gb|EDO04229.1| hypothetical protein SS1G_06712 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 977
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 249/838 (29%), Positives = 389/838 (46%), Gaps = 107/838 (12%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK---- 69
+G +YY + R+ + + + S + +ID +K +P II S + EE+ L+
Sbjct: 113 IGCAYYIA--REERLCMMTDISMAGLDMIDTLKIHVEPTIILISNRCEEALEEYLQKDAK 170
Query: 70 ---RSDGTT--EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDD----------------- 107
R DG+ + T+ ++ F YE A +RL L + D
Sbjct: 171 VIDRGDGSEIFGSYTLDSRPAAEFYYEAAKNRLASLDIGAAGDAGMMFVTPGDDFAGDRN 230
Query: 108 -------GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT 160
G + + L +D+ S V +G +L L R +D L E+ +
Sbjct: 231 HIQADLGGAGRQGALMRLAGWVDLESRNSVSCAGAVLNYLRRRRSIDYLPNDEAALIAFR 290
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHM-----GIGRAKEGFSVFGMM-NKC 213
I + SL + ++A +LQI Q++ HP SHM +KE SVFG+ +
Sbjct: 291 IRKIEMFSLTDMMFINADTLSSLQIIQSESHPNSHMQGPNKSTSGSKESLSVFGLFYHLA 350
Query: 214 VTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHI-- 269
TP G+++LR FLRP +D+ + RL + FL E L+ + ++L+ +KDI +
Sbjct: 351 STPQGKQMLRKMFLRPSIDVSVIEERLWTVGTFLIPENRPLLQEIQKSLRSIKDIRTVVI 410
Query: 270 -LKKFNSPSFIYTASDWTAFLKSICSL-LHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
L+K S + + SI S H KI E LR L D A+
Sbjct: 411 HLQKGVSGGSGKAMAVKSGIWGSIRSFSFHSLKILEA---------LRNLAGDKTVIASK 461
Query: 328 CIT----TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
+ +L + +++ ID RS E+ + VR+G ELDE+++ Y+ + FL EV
Sbjct: 462 LLNESRPNDLLGIGQIITETIDFERSAEQ-HRITVRQGVDPELDEMKRTYDGIESFLAEV 520
Query: 384 ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD----MD 439
+P ++ CI Y Q+G+L + +LD T E E D +
Sbjct: 521 KRKITDDIPEWARQYVENCI-YFPQLGFLTVV---QLDPDTGEGKYKGEGTEDDEWTLIF 576
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
++++Y + R++D +GD+Y I E I +L + L+ + ELD
Sbjct: 577 VSDEKIYYKNSRMRDMDECIGDMYSTIAGREIEIIHELTVRVLEQEKLLITVSDRCGELD 636
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINI--- 556
++LAL A + + P +T ++DI+ GRH LQE+TV +++ ND + I
Sbjct: 637 SLVALALGAIKYRFNPPTITQANVIDIKGGRHPLQELTVPSYVANDCYLAGGSGNGIGLD 696
Query: 557 ---------------------ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+TGPNYSGKS+Y+KQ ALIV+L+HIGS+VPAD+A VGLT
Sbjct: 697 QQFPSDTIQESKNIEGPSMLLMTGPNYSGKSVYLKQTALIVYLAHIGSYVPADSAVVGLT 756
Query: 596 DS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++ QS+FMIDL QV + AT +SL ++DEFGKGT + DG L G
Sbjct: 757 DKILTRITTRESVSRNQSAFMIDLQQVALCTTLATHRSLVVIDEFGKGTNSTDGASLACG 816
Query: 648 TINYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED--IVF 704
YF+ D PKVL TH E+ G LP L F M V N D+ D + +
Sbjct: 817 VFEYFLGLDSHRPKVLGATHFHEIFENGFLPPRPELAFGHMEV--HVNKEADLADDQVTY 874
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQ 762
LY V G + S+G CA + G+ + +++RA ++ A + + NIS +D Q
Sbjct: 875 LYNFVLGRSTSSFGTSCAAINGIDSAIVERAEDLILLAARGEDLTEALAANISNKDAQ 932
>gi|119495748|ref|XP_001264652.1| DNA mismatch repair protein Msh5, putative [Neosartorya fischeri
NRRL 181]
gi|119412814|gb|EAW22755.1| DNA mismatch repair protein Msh5, putative [Neosartorya fischeri
NRRL 181]
Length = 833
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 208/667 (31%), Positives = 352/667 (52%), Gaps = 49/667 (7%)
Query: 108 GLSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
G +++E R+ ++ S +DM + V + +G +LA ++ R D++ S A + SV
Sbjct: 112 GFTLQEGRLLHMASSIDMENPVTIGCAGAVLAYIQRRRTTDSITTLGSTGA-YQVRSVEM 170
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNKCV-TPMGR 219
SL + ++ + +LQI +++ HPS + G GR +KEG SV+G+ + TP GR
Sbjct: 171 FSLKGTMFINRSTLLSLQITESESHPSMLNQGPGRKSPASKEGLSVYGLFQRFAHTPQGR 230
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPS 277
LR FLRP +++ ++ R + IS +L + + + + LK++K++ ++ N
Sbjct: 231 NRLRQMFLRPSVEMNVISERHDFISVYLRQDNYNTLNKIVKGLKHIKNLRPVM--INLQK 288
Query: 278 FIYTAS-DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI-TTELAY 335
I T S T F ++ + L + + I ++L+E N ++ +A ++L
Sbjct: 289 GISTGSAKITGFKTTVWATLLAFAFYGIDIHDALKETFGADNLNLRTQALRVFEASQLYR 348
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
V ++ I+D++ S+++G T+V+ G ELD ++ Y+ L + L+EVA+ +P
Sbjct: 349 VGRMIQEIVDIDCSEDQGR-TVVKPGLDRELDRMKDTYDGLNDLLKEVATEIAATIPESL 407
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
++Y Q+G+ + + L+D G + + R ++ + RE+
Sbjct: 408 D--IDVNVIYFPQLGFNIAV---PLNDRGEAAYSGTADDWELIFVTENRAYFKDFRMREM 462
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
D LGDIY I + E I DL + D L++A + +D L++A A N +R
Sbjct: 463 DQSLGDIYGLICEKEIEIVYDLAQKVLQHKDVLVQASDMCGHIDSLLAMAQAASFYNMVR 522
Query: 516 PILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-----DNDGRIN-------------II 557
P + E ++ I+ GRH+LQE+TV +++PNDT + + + R++ I+
Sbjct: 523 PRMVEEKMIRIKGGRHILQELTVPSYVPNDTFLVGGSSETESRVSQKVLENLHGPSMLIL 582
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMI 609
TGPNYSGKS+Y+KQVAL V+L+ +GSFVPA+ A +G+TD + ++ QS+FM
Sbjct: 583 TGPNYSGKSVYMKQVALNVYLAQVGSFVPAEKAEIGVTDKILVKMNSQESVSKIQSTFMN 642
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
DL Q+ L+Q T +SL L+DEFGKGT DGIGL G + + ++ PKV+ TH E
Sbjct: 643 DLQQISFDLKQVTGRSLLLIDEFGKGTNESDGIGLACGILEHLLSLKDAPKVIAATHFHE 702
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVP 728
+ G L RL+ M V R + VED I +LY PG + S+G CA + G+
Sbjct: 703 IFENGFLQPRPRLQLGHMEV-RISGEACQVEDQITYLYNFRPGRSNKSFGTICAAMNGIS 761
Query: 729 AEVIKRA 735
++ RA
Sbjct: 762 QTIVDRA 768
>gi|453088642|gb|EMF16682.1| mismatch repair protein 5 [Mycosphaerella populorum SO2202]
Length = 852
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 247/795 (31%), Positives = 372/795 (46%), Gaps = 120/795 (15%)
Query: 41 LIDIVKYQAQPQIIYTSTKSEESFLSAL------------KRSDGTTEAPTVKLVKSSIF 88
++D +K +P +I STK E ++ L RSD T ++ ++ F
Sbjct: 11 IVDALKLFIEPTVILVSTKCNEEAINRLDPELRTQRASVDARSDQTRLPYLLECRPNAEF 70
Query: 89 SYEQAWHRLIYLRVTGMDDGLSI---------------------KERIC---YLNSMMDM 124
YE +L L + G+ DG ++ R C L +++M
Sbjct: 71 GYESGKVKLANLHI-GLPDGPTVTYVVPGDVVANDDFPAHEDEKSGRQCAILRLAGLVNM 129
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
S + V +G +L+ L+ + L A I +V SL + ++A ++LQ
Sbjct: 130 DSRITVGCAGAVLSYLQRRKATTFLPGDRDAEAMFRIATVEMFSLGGSMFINADTLQSLQ 189
Query: 185 IFQTDKHPSHMGIGRA--------KEGFSVFGMM-NKCVTPMGRRLLRNWFLRPILDLEN 235
I T+ HP+ G A KEG SV+G+ N T GR LLR +FLRP L+++
Sbjct: 190 ITTTESHPNAQQQGPASKNWSRGSKEGLSVYGLFHNLAKTAQGRHLLRQFFLRPSLNMDV 249
Query: 236 LNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKF----------NSPSFIYTAS 283
+N R + I F+ E + + TL VKD+ + N P T S
Sbjct: 250 INERHDTIGAFIRPENAATLGQIANTLAGVKDMRRVTTDLRRGIRSGVNNNQP---ITTS 306
Query: 284 DWTAFLKSICSLLHVNKIF-EVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
W + L + + +V SE L +++ I E+ LA V L+
Sbjct: 307 VWGRMRDYTFAALELTDLLTQVVGSEGL-----VVHRKIAEQFNKL---HLAEVGALISD 358
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
++D SK T+V G DELD+ ++ YE + + L +VAS Q+P K
Sbjct: 359 VVDFELSK-YAKRTVVLHGISDELDDAKRTYEAIEDMLSQVASHIARQVPADLKSKV--N 415
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA--FSDMDGETKRLFYHTPKTRELDNLLG 460
+++ QIG+L+ I E+ +D +G + A + M + +Y T ELD G
Sbjct: 416 VIFFPQIGFLISI--EREEDDIAVPYEGPDPAEPWEQMFTSSTHAYYKNTNTMELDENYG 473
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
DI+ ILDME I +++ + + + + ELD ++LA A Q +RP +T
Sbjct: 474 DIWGCILDMEIEIIQNMAQRVLEHEELINTTSDICGELDSLVALARGAVQYRLVRPNMTE 533
Query: 521 EPLLDIQNGRHVLQEMTVDTFIPNDT-----------------RIDNDGRIN-------- 555
+ ++ I++GRH+LQE+TV F+PND +I D RI
Sbjct: 534 QNIVRIKDGRHILQELTVPAFVPNDAYLLGGCGDDTAADPRECKISADPRITQPLPPDAP 593
Query: 556 ---IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQ 604
++TGPNYSGKSIY+KQVA+IV+++HIGSFVPA+ AT+GLTD+ + ++ Q
Sbjct: 594 SVLMMTGPNYSGKSIYLKQVAIIVYMAHIGSFVPANYATIGLTDAILTRISTRETVSRIQ 653
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT----CDVPPK 660
S+FMIDL Q + L AT +SL ++DEFGKGT + DG GL G + + C PK
Sbjct: 654 SAFMIDLQQASVALNMATRRSLLIVDEFGKGTESYDGAGLAAGVFEHLLQRGPEC---PK 710
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
V+ TH E+ G LP L F M V + S I +LY L PG + SYG
Sbjct: 711 VIGATHFHEIFESGFLPPRPALGFGHMEVQVDDAQSVVENQITYLYNLRPGRSASSYGTM 770
Query: 721 CALLAGVPAEVIKRA 735
CA + GV A V RA
Sbjct: 771 CARINGVDAIVTDRA 785
>gi|154318337|ref|XP_001558487.1| hypothetical protein BC1G_03336 [Botryotinia fuckeliana B05.10]
Length = 923
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 253/852 (29%), Positives = 400/852 (46%), Gaps = 114/852 (13%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
+V MA L G VG +YY + R+ + + + S + +ID +K P +I ST+
Sbjct: 41 EVVMAVELKGRGTVGCAYYLA--REEKLCMMADISMAGLDIIDTLKVHVDPTVILISTRC 98
Query: 61 EESFLSALKR-SDGTTEAPTVKLVKSSI--------FSYEQAWHRLIYLRVTGM------ 105
EE+ L++ + G + S I F YE A ++L L + G
Sbjct: 99 EEALEDHLQKDAKGIDRGDANDIFGSYILDSRPASEFYYETAKNKLASLGIEGPWGAEMI 158
Query: 106 ------------------DDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVD 147
G + R L +D+ S + V +G +L L R VD
Sbjct: 159 LATPSDELAGNHTHDQADSAGKGRQGRFMRLAGWIDLESRISVGCAGAVLNYLGRRRSVD 218
Query: 148 TLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHM-----GIGRAK 201
L E+ + + ++ SL + ++A +LQI Q++ HP SHM +K
Sbjct: 219 YLPNDEAALIAFRVRTIKMFSLMDMMFVNADTLSSLQIIQSESHPNSHMQGPNKSTSGSK 278
Query: 202 EGFSVFGMM-NKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHE 258
E SVFG+ + TP GR+ LR F+RP +D+ + RL I FL E ++ + +
Sbjct: 279 ESLSVFGLFYHLASTPQGRQKLRKMFMRPSMDIPVIKERLLTIGIFLLPENGPVLQEIQK 338
Query: 259 TLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
+L+ VKDI H+ K + S TA + + H KI E L
Sbjct: 339 SLRNVKDIRTVVIHLQKGISGGSAKATAVKSGVWGSILSFTYHSLKILEA---------L 389
Query: 315 RLLNFDIVEKAASCI----TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
R L D + + +L + + + ID RS E+ + VR+G ELD ++
Sbjct: 390 RGLAGDKTIISGKLLGETRPNDLLGIGQAITETIDFERSVEQ-HRVTVRQGVDPELDGMK 448
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
+ Y+ + L +V +P ++ CI Y Q+G+L + +LD T E
Sbjct: 449 RTYDGMESLLTKVQQKMSDDIPEWARQYVENCI-YFPQLGFLTVV---QLDPNTGEGKYK 504
Query: 431 FEFAFSDMDGET----KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
E D +T ++++Y RE+D +GD+Y++ +++ +T ++ H +
Sbjct: 505 GEGTDEDEWSQTFVSDEKVYYKNKHMREMDEYIGDMYNREIEIIHHLTVRVLEH-----E 559
Query: 487 HLLKAV-NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPND 545
+LL AV + ELD ++LAL A + + P +T ++DI+ GRH LQE+TV +++PND
Sbjct: 560 NLLIAVSDLCGELDSLVALALGAIKYRFNPPTITHANVIDIRGGRHPLQELTVPSYVPND 619
Query: 546 TRI--------------DNDGRIN----------IITGPNYSGKSIYIKQVALIVFLSHI 581
+ + R N ++TGPNYSGKS+Y+KQ ALIV+L+HI
Sbjct: 620 CYLVGGSGSPIPINQEPSSSNRQNWEGTEGPSMLLMTGPNYSGKSVYLKQTALIVYLAHI 679
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GS+VPAD A VGLTD + ++ QS+FMIDL Q+ + AT +SL ++DEFG
Sbjct: 680 GSYVPADKAVVGLTDKMLTRITTRESVSRNQSAFMIDLQQIALCTTLATHRSLVVIDEFG 739
Query: 634 KGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
KGT + DG GL G YF+ D PKVL TH E+ G L L F M V
Sbjct: 740 KGTNSTDGAGLACGVFEYFLGLDSHRPKVLGATHFHEIFENGYLSPRSELAFGHMDV--H 797
Query: 693 ENNSTDVED--IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
N +D+ D +++LY V G + S+G CA + G+ +++RA ++ A + + +
Sbjct: 798 VNRQSDLPDNQVIYLYNFVLGRSTSSFGTSCAAMNGIDPAIVERAEDLILLAARGEDLMQ 857
Query: 751 WSHENISAQDQQ 762
N S +D Q
Sbjct: 858 AVAANASERDAQ 869
>gi|440631819|gb|ELR01738.1| hypothetical protein GMDG_00114 [Geomyces destructans 20631-21]
Length = 1000
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 233/805 (28%), Positives = 392/805 (48%), Gaps = 99/805 (12%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
+G +YY + +L + E + S D ++D +K A P ++ STKS+++ L +
Sbjct: 144 LGCAYYIAREEKLFLTEDIKLSGLD--IVDTLKLHASPTVVLISTKSDDALEDHLMKDAS 201
Query: 74 TTEAP-------TVKLVKSSIFSYEQAWHRLIYLRVTGMD-------------------- 106
+ P + S+ F YE A +L+ ++G +
Sbjct: 202 RGDNPDAIFGAYVLDSRPSAEFQYEPAKSKLVNCDLSGSNGPRMQFSTPGDELMGNMGYM 261
Query: 107 ------DGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT 160
+ + R+ L +D+ S V + +G +L+ L R + L + +
Sbjct: 262 QDPEEYEAAGYQGRLLGLAGCIDLESRVSIGCAGAVLSYLSRRRTTEYLPGDQEALIAFN 321
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS-HM-GIGRA----KEGFSVFGMMNKCV 214
+ ++ SL + ++A +LQI Q++ HP+ HM G ++ KE SV+G+ ++
Sbjct: 322 VSTIEMFSLADMMFINADTLNSLQILQSEFHPNIHMQGPTKSNSGVKESLSVYGLFHQLA 381
Query: 215 -TPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMASLHETLKYVKDIP---- 267
TP G+ LR FLRP LDL + R N I+ L + + + + ++LK +K+I
Sbjct: 382 HTPQGKHKLRQVFLRPSLDLNLIQERHNTIAILLRPGNADALNIITQSLKRIKNIRTVLI 441
Query: 268 HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKA-A 326
H++K + +AS A + I L + + +++R IV K
Sbjct: 442 HLMKGVGA-----SASKGGAIKQGIWGSLQQFTFHSLKVVDAIRSIEDGDKLAIVGKVLK 496
Query: 327 SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
+ EL V EL+ +D S + + T+V +G +LD L++ Y+ L +FL ++A+
Sbjct: 497 ELLPAELHVVGELITQTVDFAES-DLHHRTIVMQGVDSDLDNLKRTYDGLEDFLSQMAAK 555
Query: 387 ELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE-------FAFSDMD 439
+ +LP + CI + Q+G+L + + + QG + F DM
Sbjct: 556 LVAELPEWAAQYVQNCI-FFPQLGFLTVVTLDPETGRGNYEGQGLDDDAWNLSFCTEDMG 614
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
+Y + +E+DN GD+Y I D E I +L + L + +LD
Sbjct: 615 ------YYKNRQMKEIDNHFGDMYGMICDREIEIIHELAVGVLKHEKVLKDTSDIIGDLD 668
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID-----NDGR- 553
C ++LA A ++N + P +T + ++DI GRH+LQE+TV +++ N+ + +DG
Sbjct: 669 CLVALAQGARKHNLLPPQMTNDNVIDITGGRHLLQELTVPSYVANNVFLQGGSGKDDGEE 728
Query: 554 -------------INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--- 597
+ ++TGPNYSGKS+Y+KQ+ALIV+++HIGSFVPAD+AT+GLTD
Sbjct: 729 AMSTHNNQPKGPSLLLMTGPNYSGKSVYLKQIALIVYMAHIGSFVPADSATIGLTDKILT 788
Query: 598 -----KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
+ ++ QS+FMIDL Q+ + AT +SL ++DEFGKGT + DG GL G F
Sbjct: 789 RIATRESISRAQSAFMIDLQQIALATTLATHRSLIVIDEFGKGTNSSDGAGLACGVFECF 848
Query: 653 VTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVP 710
++ V PKVL TH E+ G L L+F M V R + S VED + +LY
Sbjct: 849 LSLGVNRPKVLGATHFHEIFAGGALQDRPELEFGHMEV-RVDAESESVEDQVTYLYNYKS 907
Query: 711 GHALLSYGLHCALLAGVPAEVIKRA 735
G ++ S+G +CA + GV +++RA
Sbjct: 908 GKSMSSFGTYCAAMNGVDPAIVERA 932
>gi|432089448|gb|ELK23390.1| MutS protein like protein 5 [Myotis davidii]
Length = 787
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 248/807 (30%), Positives = 391/807 (48%), Gaps = 71/807 (8%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEES---FLSALKR 70
+G++YYD+ +H + D S L+ V + P+ + TS K +E+ FL L
Sbjct: 17 LGLAYYDTGDSAVHFMPDAPDRES-LQLLQRVLDEISPRSVVTSAKQDENMTRFLGKLAS 75
Query: 71 SD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQ 129
+ G + P + + S F E + RL+ + + D ++ E+I +L+S++ +
Sbjct: 76 QEHGEPKRPEIIFLPSVDFGLEISKQRLLSGNYSFIPDSMTTTEKILFLSSIIPFDCLLM 135
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
VRA GGLL L RI LE N S+ I + L + +D +
Sbjct: 136 VRALGGLLKFLGRRRIGVELEDY---NVSVPILGFKKFVLTHLVSIDQDTYSTDTYCHNR 192
Query: 190 KHP----SHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
+ P S + I + G++ +T R WF RP DL LNSRL+ I F
Sbjct: 193 QGPANTFSQIEITTMMRTDVISGLLTPTLTS------RLWFTRPTHDLGELNSRLDVIQF 246
Query: 246 FLCSEEL-MAS-LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
FL + L MA LH L ++K++P ILK+ SDW K++ S L +
Sbjct: 247 FLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSALGLRDA-- 302
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
SL + ++L DI ++ + +L ++ L+ ++D S T V
Sbjct: 303 ---CRSLPQSIQLFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAANRFT-VLPNID 353
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKL 420
E+DE ++ LP FL EVA EL L C+ +P ++YI IG+L+ I +
Sbjct: 354 PEIDEKKRRLAGLPSFLTEVARKELENLD--CR---IPSCSVIYIPLIGFLLSIPRLPSM 408
Query: 421 DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSH 480
+ +++G +F F ++L Y + +T+ELD LLGD++ I D E + L
Sbjct: 409 VAASDFEIEGLDFMFL----SEEKLHYRSARTKELDALLGDLHCDIRDQETLLMYQLQCQ 464
Query: 481 ICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVD 539
+ L + ++ A+ LD L+LA A Y RP + + + IQNGRH L E+
Sbjct: 465 VLARVAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQLFGVRIQNGRHPLMELCAR 524
Query: 540 TFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS- 597
TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+
Sbjct: 525 TFVPNSAECGGDKGRVRVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAI 584
Query: 598 -------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
+ ++ S+FMIDL+QV + AT +SL L+DEFGKGT T DG+ LL +
Sbjct: 585 FTRIHSCESISLGLSTFMIDLNQVAKAVNSATERSLVLIDEFGKGTNTVDGLALLAAVLR 644
Query: 651 YFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+++ TC P + V T+ L+ LP+ +++ TM D D+VF Y
Sbjct: 645 HWLALGPTC---PHIFVATNFLSLVQLPLLPQGPLVQYLTM------ETCEDGNDLVFFY 695
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
R+ G A S+ H A A +P ++I R V + ++ K ++ Q + +
Sbjct: 696 RVCEGVANASHASHTAAQARLPDKLIARGKEVSDLIRSGKPIQPLKELLKEKQMENCQTL 755
Query: 767 VEKMLAFDVLKG--DLRLFF-QDLLPS 790
V+K L D+ DL +F Q++LP+
Sbjct: 756 VDKFLKLDLEDPNLDLDIFMRQEVLPA 782
>gi|327293902|ref|XP_003231647.1| DNA mismatch repair protein Msh5 [Trichophyton rubrum CBS 118892]
gi|326466275|gb|EGD91728.1| DNA mismatch repair protein Msh5 [Trichophyton rubrum CBS 118892]
Length = 993
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 239/812 (29%), Positives = 402/812 (49%), Gaps = 110/812 (13%)
Query: 14 VGVSYYDSSIRQLHVLE--VWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
+G SYY + +L+V+E V+ + +IDI+K + +P ++ S ++++ L
Sbjct: 104 IGCSYYSAQEEKLYVMEDIVY----GGYGVIDILKLEIEPTVLLLSLRADQG-LEDPTHP 158
Query: 72 DGTTEAPT-----------VKLVKSSIFSYEQAWHRLIYLRV--------------TGMD 106
+GT+ A + + + + F +E A +L + TG
Sbjct: 159 EGTSRATSDIDSHLQLPYLLDVRPTQEFGFENAKIKLAAFKFNSESNETFKFLIPGTGFS 218
Query: 107 -DGLSIKERICY---------LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGN 156
DG E + + + +DM + + V +G +L L+ +R +L+ G
Sbjct: 219 HDGNVTGENVEFTEQQGDLLNIGGFVDMENRISVGCAGAILTYLQRKRATLSLQHGSLGA 278
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMM 210
+I I ++ +SL K + ++ +LQI Q++ HP+ + G G+ +KEG S++G+
Sbjct: 279 PAIGISAIGMISLQKAMLINRDTLASLQILQSESHPNAFNQGPGKTSSGSKEGLSIYGLF 338
Query: 211 NK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIP 267
+ TP G+RLL+ FLRP D + R IS FL E + L ++LK +K++
Sbjct: 339 HHFARTPQGKRLLKQLFLRPSTDPTVIGQRHEFISVFLRPENDPTLGQLIKSLKNIKNMR 398
Query: 268 ----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
H+ K ++ S + + F + S L + ++ +L+E + D+
Sbjct: 399 PVMIHLRKGISTGS-----AKFRGFKGVVWSSLLDFAFHAIDVNLALKEVTGVQALDVCM 453
Query: 324 KAASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
KA + +LA ++++ + I+D++ S E+ + T+VR G ELD L++ Y + L
Sbjct: 454 KA--LLKLDLAQLHQVGAKIHEIVDLSISVEE-HRTVVRSGIDQELDNLKETYSGMDSLL 510
Query: 381 EEVASLELVQLPH-LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+VA LP + KE+ V VY Q+G+ + + DD + + ++ +
Sbjct: 511 NQVAVNIAASLPEAITKEINV---VYFPQLGFNIAM---PFDDRDMPMYGSNDEDWTQVF 564
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
R ++ + RE+D LGD+Y I + E I L I + L+ A N E+D
Sbjct: 565 NTENRAYFKDSRMREMDEKLGDVYGLICEKEIEIVYKLAQDILTYEKMLVDASNICGEID 624
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------D 549
L+L A + +RP +T E ++ I++GRH+L E TV +F+PNDT I
Sbjct: 625 SLLALVQGASLHKLVRPRMTEENVISIKSGRHMLHEATVSSFVPNDTFIVGGKGSMEDTP 684
Query: 550 NDGRIN----------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
ND N ++TGPN+SGKS+Y+ QVA+IV+++HIGSFVPAD+A +G
Sbjct: 685 NDVPSNTDPRPAGETTQRPSMLLLTGPNFSGKSVYLSQVAIIVYMAHIGSFVPADSAIIG 744
Query: 594 LTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
TD ++ T E QS+F DL QV L QAT++SL ++DEFGKGT + DG GL
Sbjct: 745 YTDRILTRISTRETVSKIQSTFANDLQQVSFALNQATNRSLIIIDEFGKGTESSDGAGLA 804
Query: 646 GGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G Y ++ D PKV+ TH E+ G L L+F M V + ++ +VED +
Sbjct: 805 CGLFEYLLSVGDQRPKVIAATHFHEIFENGFLKSRPELEFGHMEV-QINRSAENVEDQVT 863
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+LY G + S+G +CA +AG+ ++ RA
Sbjct: 864 YLYNFRLGKSSSSFGTNCAAMAGIDTGIVSRA 895
>gi|449305088|gb|EMD01095.1| hypothetical protein BAUCODRAFT_62522 [Baudoinia compniacensis UAMH
10762]
Length = 975
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 241/823 (29%), Positives = 392/823 (47%), Gaps = 118/823 (14%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK---- 69
VG +YY + +L+ +E + D ++D +K P I+ STK + ++ L
Sbjct: 128 VGCAYYVARQEKLYFMEDVQLGGPD--IVDQLKVFVDPTIVLVSTKCNDEVMNRLDPEMR 185
Query: 70 --------RSDGTTEAP-TVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSI--------- 111
RS T P ++ ++ F+YE A +L LRV G +G +
Sbjct: 186 DARVSEDGRSGDQTRLPYLLECRPNAEFAYEAARTKLANLRV-GQRNGPRVTFVVPGDVM 244
Query: 112 ----------------KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESG 155
+ ++ L +++ S + V +G +L+ L+ R+ L E+
Sbjct: 245 SGPEDFNLPDVDYGGRQGQLLRLAGWVNVESRITVGCAGAVLSYLQRRRVTAYLPGDEAS 304
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHM--------GIGRAKEGFSVF 207
+ ++ SL+ + ++A +LQI T+ HPS AKEGFSV+
Sbjct: 305 EGMFRVATIEMFSLSGTMFINADTLLSLQITSTESHPSAQYQSSSRTGRSSGAKEGFSVY 364
Query: 208 GMM-NKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVK 264
G+ N+ T GR LLR +FLRP L+L +N RL+ IS L E M +L E L +K
Sbjct: 365 GLFHNEAKTAQGRALLRQYFLRPSLNLAVINERLDTISVLLRPENAPSMNTLRECLSKIK 424
Query: 265 DIPHI---LKKFNSPSFIYTASDWTAFLKSI-----CSLLHVNKIFEVGISESLREQLRL 316
++ + L K S S + SI +L ++ + E+ S+ L ++R+
Sbjct: 425 NMRLVTINLHKGTSRGLDRNRSVSNSVWPSIRHFSFYTLQVLDALVELQGSQRLAIRVRI 484
Query: 317 LN-FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
FD +LA + +++ +ID+ S+E+ T+VR G +LDE ++ Y+
Sbjct: 485 EEMFD---------RRQLAILGKMINDVIDIEASREQNR-TVVRPGIDADLDEAKRTYDG 534
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI-FEEKLDDTTLEQLQGFEFA 434
+ + L VA + Q+P +++ QIG+L+ + ++ E + E
Sbjct: 535 IEDLLSRVALVVAEQVPAELDSKV--NVIFFPQIGFLISLRLAQETGRGVWEGTE--EEP 590
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
+ M + +Y E+D GDIY +I D + I + L + + + L A +
Sbjct: 591 WERMFTTEENAYYKNANMTEMDQYFGDIYGRICDKQIEIVQRLGEQVLEYEELLNDASDI 650
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRI 554
ELD ++LA A +N ++P +T E ++ I+ GRH LQE+TV +++PNDT I G
Sbjct: 651 CGELDALVALARGAALHNLVKPRVTDENIVKIKGGRHPLQELTVPSYVPNDTYIVGGGID 710
Query: 555 N---------------------------------IITGPNYSGKSIYIKQVALIVFLSHI 581
N ++TGPNYSGKS+Y+KQVA+IV+++HI
Sbjct: 711 NEDAAACHDPGLQNAAAASSQTAPRQRAEGPSMVLMTGPNYSGKSVYLKQVAIIVYMAHI 770
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA+AA +GLTD + ++ QS+FMIDL Q+ + L AT +SL ++DEFG
Sbjct: 771 GSFVPAEAAKIGLTDKILTRISTRESVSRIQSAFMIDLQQISVALSLATRRSLLVIDEFG 830
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
KGT + DG GL G + + PKVL TH E+ G LP+ +L F M V
Sbjct: 831 KGTESYDGAGLAAGVFEHLLQRGAECPKVLGATHFHEIFEAGFLPERPQLAFAHMEVRAD 890
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ S E I +LY G + S+G CA + G+ ++++RA
Sbjct: 891 DQASAVEEQITYLYNYKQGRSSSSFGTCCAAMNGIDPKIVQRA 933
>gi|395328688|gb|EJF61079.1| hypothetical protein DICSQDRAFT_155487 [Dichomitus squalens
LYAD-421 SS1]
Length = 995
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 253/848 (29%), Positives = 401/848 (47%), Gaps = 141/848 (16%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKY---QAQPQIIYTST 58
+V +A RV +YYD + VL V++DS D L D+ K +A P ++ TS+
Sbjct: 118 KVCLAATCQSGRVACAYYDPV--KCTVL-VFDDSPEDHHL-DLTKALLEKAGPDVVLTSS 173
Query: 59 KSEESFLSALKRS-DGTTEAPTVKLVK--------------------------------- 84
K++++F+ L+ DG+ V+ K
Sbjct: 174 KADDNFIEVLRNHVDGSRGTFQVRPHKDFIPLKGRDRLLSLRLLSQLPVYQNDQDTTSEL 233
Query: 85 SSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDM-GSEVQVRASGGLLAVLENE 143
SI A+ + R TG D L L + + S + + + G LL L
Sbjct: 234 GSISEPRNAYDFMRRRRETGGDPMLQKWNASVRLANFASVENSPLCLGSIGALLDYLARA 293
Query: 144 RIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG 203
R V LE + G + I S+ + L ++++ A +LQIF+ + H S + + KEG
Sbjct: 294 RAVSDLE--DEGINGLEIRSIEPLLLTDTMQINMDALFSLQIFEDENHAS-IHSDKTKEG 350
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLK 261
S+FG++N T +GR L+R WFLRP + LE +N+R +A+ FL E + ++ L
Sbjct: 351 LSLFGILNNTKTTLGRALMREWFLRPSMSLEVINARHDAVECFLRPENITTRNAMQGHLN 410
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESL---REQLRLL 317
K++P IL + SDW A +K + +LL + + E+ + S+ R+ ++ L
Sbjct: 411 GTKNVPRILGAIRTGK--AKVSDWQALVKFAFHALLLRDALSELKHAGSVMIVRKLIKAL 468
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
+ + S + IID S G VR +ELD L+ IY +
Sbjct: 469 DVSNFRQLGSAVNE-----------IIDWEESTNTGR-VCVRPRIDEELDNLKHIYNGID 516
Query: 378 EFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEF 433
L +VA VQ+ + P +VY Q+G+L+C+ EE D + L G+ F
Sbjct: 517 SVLSKVA----VQVSATILPDYTPSLNVVYFPQLGFLICVPMKEEWKTDAGITVLDGWNF 572
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
FS +++ + + ++D +GD++ I+D E I + L I ++ + + A +
Sbjct: 573 QFS----SESHVYFKSQEMHDMDVHIGDLHPAIVDREIEIVQALQEKILVYDEIIGHACD 628
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGR 553
AELDC +S AL A +Y RP ++ E ++DI+ GRH +QE V TF+PNDT +
Sbjct: 629 VCAELDCLVSFALAARSYDYRRPYMSTENIIDIKQGRHPMQEFAVPTFVPNDTYLVGGAG 688
Query: 554 INII------------------------TGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
I + TG N GKS+Y+KQVALI +++ IG FVPA++
Sbjct: 689 IGVTFPDDETETESQEEPHNVKNSVMVCTGANACGKSVYLKQVALIQYMAQIGCFVPAES 748
Query: 590 ATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +G+ D ++ T E QS+FMIDL+QV + LR +T++SL +LDEFGKGTL DG
Sbjct: 749 AILGVVDKIFTRVQTRESVSRVQSAFMIDLNQVSLALRNSTARSLLILDEFGKGTLPTDG 808
Query: 642 IGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCL-PKSERLKFYTMSVL------ 690
GL G + + + +C PK + TH ++ + P + F M V+
Sbjct: 809 AGLFCGMLKHLLERGSSC---PKTIATTHFHDIFHNNLFSPCRVPVTFVHMQVMFSLNQG 865
Query: 691 ------RPENNSTDVED------------IVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
R + + ED IV+LY++V G++L S+ + CA L+GVP V
Sbjct: 866 PGALESREPSAFIEYEDDGSQTRMGPDDKIVYLYKVVNGYSLHSHAITCAELSGVPKRVT 925
Query: 733 KRAAYVLE 740
RA YV E
Sbjct: 926 SRAQYVNE 933
>gi|328767136|gb|EGF77187.1| hypothetical protein BATDEDRAFT_27844 [Batrachochytrium
dendrobatidis JAM81]
Length = 914
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 246/854 (28%), Positives = 403/854 (47%), Gaps = 115/854 (13%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLE-VWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
V MA +R+G + + S L + E V EDS + + + +Q P I T +++
Sbjct: 60 VIMAICCRHNRMGAALLNGSTSTLQLFEDVCEDST--YQMCRSLLFQTHPTSILTFARAD 117
Query: 62 ESFLSALKRSDGTTEAPTVKLV--KSSIFSYEQAWHRLIYLRVTGM-----------DDG 108
++F+ L+++ + E + +L+ + FSYE +L+ +++ + D
Sbjct: 118 QAFIRILEQAISSMENQSCELLLRPTPEFSYESGKSKLLSIQLAHLNSSVYCVLDQSDSK 177
Query: 109 LSIKERI-CYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV 167
+ R+ L ++ + V +G LL L + T + + ITI +V +
Sbjct: 178 AKYRTRLQMLLEGIVVLDHREMVGTAGALLTYLAKTNLTRTFDYGDH----ITIQTVENI 233
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
SL ++L A +L IFQ HP+ + +E S+FG++N T G+ LL+ W +
Sbjct: 234 SLENTMQLSVNAMTSLHIFQEQGHPNIFRQAK-RESLSLFGILNFSQTQAGKMLLKQWIM 292
Query: 228 RPILDLENLNSRLNAISFFLCSEELMAS--LHETLKYVKDIPHILKKFNSPSFIYTASD- 284
RP+LDL+ + R ++I +F+ ++L + L ++L+ +++IP K + T SD
Sbjct: 293 RPLLDLDTIKERHDSIEWFI-QQDLSSRKMLQDSLRRLRNIPGYEFKTITSRLASTPSDC 351
Query: 285 -WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---------- 333
W + S+L + + I R+ IV K + L
Sbjct: 352 IW------LSSVLDQFMFYSLTIRTFFRDHCHPSQLKIVIKILDDVPPSLFQQLSQHIND 405
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
Y + + I D + SKE+ +V++ ++LD ++ Y L L VA+ +P
Sbjct: 406 VATYHIYLKI-DFDMSKEEAR-LVVKQNVDEDLDSFKKTYSNLETILSTVATTVAQTVPQ 463
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEE---KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ IVY Q+GYL+ I K + G F FS +Y +
Sbjct: 464 TLSKSLN--IVYFPQLGYLVAISNSAILKCQSNHDYAIDGLLFQFS----TATMAYYKSD 517
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
ELD+ LGDI+ I+D E + + L + ++ L+A EL+C LSL A +
Sbjct: 518 MMYELDDTLGDIHSMIVDRELEVVQQLREVMLDHGEYFLQASRTLTELECILSLTEAAVR 577
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID--------------------N 550
Y RP +T E L I GRH L+E+ +D FI NDT I +
Sbjct: 578 YKYTRPTMTHESGLHIIGGRHPLKELCIDAFIENDTHIGCSHQDTTATHSTQCHADASLS 637
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
+ ++ +ITG N+SGKS+Y++QVALIV +SHIGSFVPA +T+GLTD ++A
Sbjct: 638 NAKMMLITGANFSGKSVYLQQVALIVIMSHIGSFVPASFSTIGLTDRIFTRIHSDDSVSA 697
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT----CDVP 658
+ SF+IDL Q+ + ++ +SL ++DEFGKGT++ DGIGLL I F + C
Sbjct: 698 LKGSFLIDLQQMSYAVVNSSPRSLVIVDEFGKGTISHDGIGLLCAMIQSFCSRGQEC--- 754
Query: 659 PKVLVCTHLTELLNEG--------------CLPK-SERLKFYTMSVLRPEN-------NS 696
P VL+ TH ELL +G C+ K + + +YTM ++ + N
Sbjct: 755 PHVLIATHYHELLMDGVLDCMIPSVYSGHDCMIKPTATIDYYTMRIIETHDDESDETYNG 814
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
T + FLY+L+ G L S G+HCA +AG+P VI RA V E + + N
Sbjct: 815 TSRTGVTFLYQLIHGKCLQSLGVHCAQVAGLPKSVIDRAQQVSECVIQGEPIPM----NK 870
Query: 757 SAQDQQYKNAVEKM 770
+AQD + +++
Sbjct: 871 TAQDHIRQQIADRI 884
>gi|392591718|gb|EIW81045.1| hypothetical protein CONPUDRAFT_90104 [Coniophora puteana
RWD-64-598 SS2]
Length = 927
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 245/835 (29%), Positives = 393/835 (47%), Gaps = 147/835 (17%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK 69
HG R+ +YY + ++VLE ++S F I++V Q QP ++ TS++S++ +S L+
Sbjct: 72 HG-RISCAYYHPTESIIYVLEDTQESRQ-FDNINMVLDQCQPDVVLTSSQSDDDLISLLQ 129
Query: 70 RSDGTTEAPT--VKLVKSSIFSYEQAWHRLIYLRVTG----------MDDGLSIKERICY 117
G EA ++ F + R + L+ DD + R Y
Sbjct: 130 ---GRMEASAGIFQIRPHKEFVAHRGRERFLSLKFLSELEHIECNLQSDDSDNSAPRNAY 186
Query: 118 -----------------LNSMMDMGSEVQVRAS-------GGLLAVLENERIVDTLEQKE 153
N+ + M + V S G LL L ER L+ +
Sbjct: 187 EFMKQRSANTIDPTMARWNAAIRMANFASVEKSPLCMASIGALLDFLVRERAAGDLD--D 244
Query: 154 SGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC 213
+G + + +V+ ++L+ F++++A A +LQ+F+ + H S + + KEG S+FG+++
Sbjct: 245 AGIEGLDVRNVMAMNLDGFMQINADALYSLQVFENESHAS-IHSDKTKEGLSLFGILDTT 303
Query: 214 VTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIPHILK 271
T +GR L+R W LRP L + +R NA+ + + L ++ + L+ +KDIP +L+
Sbjct: 304 RTTLGRALMRTWLLRPSLSTNVIEARHNAVECLMYPQNLPVVSGIAVHLQGIKDIPRVLR 363
Query: 272 KFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT 331
+ + ASDW +K + + I + E R +L DI+ + +
Sbjct: 364 TLKAGKAV--ASDWQKLMK----FTYHSAIIRDALVELSRSEL----VDIIGRLTEAL-- 411
Query: 332 ELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL 388
++ EL + ID S G VR +ELD+ +++Y + L VA+
Sbjct: 412 DIGSYKELGNIINNTIDWEESSFAGR-VCVRSHIDEELDQRKRVYHGIDSVLSTVAA--- 467
Query: 389 VQLPHLCKEMFVPC--IVYIHQIGYLMCI-FEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
Q+ + F P +VY Q+GYL+CI + +T ++ G+ ++M
Sbjct: 468 -QISNAVPSNFTPSLNVVYFPQLGYLVCIPMPQSWPETQIQLPDGWTLQSAEM------- 519
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
++D +GD++ I+D E I + L+ + F D +++A + AELDC +S A
Sbjct: 520 -------HDMDEHIGDLHPSIVDREIEIIQGLLEQVLGFEDGVIRACDLCAELDCLISFA 572
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI---------------DN 550
+ NY RP + E +L I GRH LQE VDTF+ ND I D
Sbjct: 573 ETSESFNYSRPRMVKESVLWITQGRHPLQEQVVDTFVENDLHIVGGGPNLDHSDNENEDI 632
Query: 551 DG------RINIITGPNYSGKSIYIKQVALIVFLSHI----GSFVPADAATVGLTDS--- 597
DG I I TG N GKS+Y+KQ ALI L+ + SFVPA AAT+G+ D
Sbjct: 633 DGDSTHPASILICTGANACGKSVYLKQAALIQILAQVSLRWSSFVPAKAATLGIVDKIFT 692
Query: 598 -----KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
+ ++ QS+FMIDL+QV LR TS+SL LLDEFGKGT DG+GL G + +
Sbjct: 693 RIQTRESVSRVQSAFMIDLNQVSFALRNCTSRSLVLLDEFGKGTAPADGVGLFCGVLKHL 752
Query: 653 V----TCDVPPKVLVCTHLTELLNEGCLPKSE-RLKFYTMSVLRPENNSTDVED------ 701
+ TC P V++ TH E + + +++ + F M VL E++ T +ED
Sbjct: 753 LGRRATC---PMVIIATHFHEAFRKQLMDRNKVPITFVHMQVLITEDSDT-LEDTPSGTP 808
Query: 702 ----------------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
I +LYR+ PG ++ S+ CA G+P V+ RA YV E
Sbjct: 809 WDEHSSNLGPVTPNAKITYLYRVAPGLSVSSHAAQCAAFFGLPTRVVNRAEYVSE 863
>gi|326430448|gb|EGD76018.1| hypothetical protein PTSG_11634 [Salpingoeca sp. ATCC 50818]
Length = 859
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 234/782 (29%), Positives = 381/782 (48%), Gaps = 61/782 (7%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKY-QAQPQIIYTSTKSE 61
V M+ GH G + Y + + +LE + D D ++ Q + + S
Sbjct: 51 VAMSLCYQGHMFGFAAYSA---RTAILEAYHDKLDDVHWTNVRSMIQNKKPTVLLVHASI 107
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDG-LSIKERICYLNS 120
E+ + L + T AP V + ++F + A R+ L++ + D LS R Y S
Sbjct: 108 EAKIKELLKELRTGVAPEVIRLPKAVFDHTSAVQRVAQLKLPELQDSRLSDTHRHLYF-S 166
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA- 179
+ + RA G L+ +E R L+ ++ +T+ + + + +DA +
Sbjct: 167 FLQGDDTLMARALGALVHHIERTRFGVELDPTDTPVPIVTLQLMAQPDC---MLIDADSL 223
Query: 180 ---HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
++L +F + HPS G KEG S++G++N T G R LR W +P + +
Sbjct: 224 TCVPQSLGVFNREPHPSSFKAGGFKEGLSLYGILNSTKTAAGARCLRRWLQQPSTSADEI 283
Query: 237 NSRLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNS--PSFIYTASDWTAF---- 288
R + + + EL+ + L V+ + IL++ P DWT
Sbjct: 284 ERRQEVVGYMANAANTELLQHMRRELARVRPVQPILRRLRMQYPKL----QDWTTLRTTC 339
Query: 289 -----LKSICSL-LHVNKIFEVGISESL-REQLRLLNFDIVEKAASCITTELAYV--YEL 339
LK +C V K+ EVG S + R ++ F+ + I +A + +
Sbjct: 340 LHAMNLKGLCQKHRRVRKLDEVGQSILMFRAAFGMVVFESLADGIGDIAEAIAAIVSHNE 399
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
D SKE+ +VR ELDE ++ + LP+FL +A E+ +P E
Sbjct: 400 EEEKFDEEASKEQDR-FIVRPLISPELDEKKRQFNNLPDFLTAIAQEEMHNMPPGIAEY- 457
Query: 400 VPCIVYIHQIGYLM--CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+VY+ Q+G+L+ + E+ D TL+ G EF F DG R F+ P+ R LDN
Sbjct: 458 --SVVYLPQLGFLISATLDAERQGDPTLD---GLEFMFLS-DG---RHFFKNPRMRHLDN 508
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
++GD I DME ++ L I ++ LL+ + AELDC LS++L A + ++++P
Sbjct: 509 VVGDTQCDITDMENSLMVRLQERILDYTAQLLRVHDAVAELDCLLSMSLAAVEFSWVQPG 568
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDTR--IDNDGRINIITGPNYSGKSIYIKQVALI 575
+ + I GRH LQE+ V FIPN TR ID++ ++TGPN SGKSIY+KQ+ LI
Sbjct: 569 VRHGKGISIHAGRHPLQELCVSPFIPNHTRLAIDDEPHAMLLTGPNGSGKSIYLKQIGLI 628
Query: 576 VFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V L+ +GSFVPA++A +G+ D + ++ + S+F+ID +QV L+ A+ SL
Sbjct: 629 VVLAQVGSFVPAESAVIGIVDRLFTRIQTRESVSLDMSTFLIDTNQVATALKYASPYSLV 688
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFVTCDV--PPKVLVCTHLTELLNEGCLPKSERLKFY 685
L+DE+GKGT EDG+ L TI + + PP ++ TH ++ + + +S L+++
Sbjct: 689 LIDEYGKGTTKEDGVALAVSTIKHLMERPALDPPMLVFTTHFLDIPKQQLVAESAHLRYF 748
Query: 686 TMSVL--RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQ 743
M+ L + D DIV LY++ PG + S+ L A A +P +VI+RA V EA
Sbjct: 749 RMASLDQAQHQDDDDTADIVLLYQVQPGVSGSSHALRVAAQAELPIDVIERAQQVSEAMH 808
Query: 744 NN 745
N
Sbjct: 809 RN 810
>gi|310793240|gb|EFQ28701.1| MutS domain V [Glomerella graminicola M1.001]
Length = 752
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 234/726 (32%), Positives = 359/726 (49%), Gaps = 79/726 (10%)
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L S +D+ S + + +G AVL R + ++EQ G I S+ +L F+ ++A
Sbjct: 3 LGSFIDLDSILSIGCAG---AVLCETRRLQSVEQGSGGPGGAFITSLRMFALADFMFVNA 59
Query: 178 TAHEALQIFQTDKHPSHM--GIGRA----KEGFSVFGMMNKCV-TPMGRRLLRNWFLRPI 230
+LQ+FQ++ HP+++ G G A KE S++G+ + TP GR LR FLRP+
Sbjct: 60 DTLSSLQVFQSELHPNNLMSGTGTATAGLKESLSLYGIFHPLAGTPQGRAELRQLFLRPL 119
Query: 231 LDLENLNSRLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
++++ + R NAIS L +E + + +TLK DI L + + + ++ +
Sbjct: 120 VNIDIIRGRHNAISVLLQPGNETALEDITQTLKKGMDIKKTLAQLQRGA--ESPANSASV 177
Query: 289 LKSICSLLHVNKIFEVGISES---LREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
+ + L F + + E+ LR + F V + IT+ LA + +I I
Sbjct: 178 ERGVWWSLARFSSFVLRLREAVLELRHWREVAIFRQVIHVGNPITSFLANMLPHIIAAIP 237
Query: 346 VNRSKEKG--YGTLV-------------REGFCDELDELRQIYEELPEFLEEVASLELVQ 390
V K G G+ V + +LD L+Q Y L FL EV++ +
Sbjct: 238 VATIKSIGELVGSTVDFEETKASSRISVKWNVNPKLDTLKQTYHGLDSFLSEVSTSLTRE 297
Query: 391 LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR------ 444
LP ++ CI + Q+G+L + L DT G+E D D +R
Sbjct: 298 LPEWARKYVTGCIFW-PQLGFLTVV--PLLRDTGE---SGYEGQGLDNDRWEQRFVANGN 351
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
++Y ELD +GD Y +I+DME I L + + L A ELDC ++L
Sbjct: 352 VYYKNRSMLELDAQIGDTYSRIVDMEVEILHGLACQVLKCTSTLSCASEACGELDCLVAL 411
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI---------------- 548
A A + + P +T + +L I+ GRH LQE+TV FIPND R+
Sbjct: 412 AKGALKYGWTSPKMTTDNVLSIRRGRHPLQELTVPAFIPNDCRLVGGSGNEFETQAVSSA 471
Query: 549 --DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------K 598
D G + ++TGPN+SGKS+YIKQVALIV+L+HIGSFVPAD AT+G+TD +
Sbjct: 472 NEDLGGSMLVVTGPNHSGKSVYIKQVALIVYLAHIGSFVPADDATIGITDQILTSISARE 531
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDV 657
++ +SSF DL QV +LR T ++L +DEFGKGT +D GL+ I++F T
Sbjct: 532 SVSLTESSFGTDLRQVSFLLRCTTRRTLVAIDEFGKGTAADDESGLMTALIDHFTTLSSQ 591
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLS 716
PK+L+ TH E+ G L + M V R + + +ED +VFLY LVPG ++ S
Sbjct: 592 TPKILIATHCHEIFEGGYLKGRPEMFLAQMDV-RLDLEAEHMEDQVVFLYELVPGRSMSS 650
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVL 776
+G CA L GV V++RA + N+ + ++ + QD+ E +V
Sbjct: 651 FGSRCAALNGVETTVVERAEAITLLLARNEDLGA-AYAKLDVQDEARLEEAE-----NVA 704
Query: 777 KGDLRL 782
+G LRL
Sbjct: 705 RGFLRL 710
>gi|390603482|gb|EIN12874.1| hypothetical protein PUNSTDRAFT_111245 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 940
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 242/845 (28%), Positives = 395/845 (46%), Gaps = 139/845 (16%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++ +A H R+G +YY+ ++VLE DS F L ++ QA P I+ T ++++
Sbjct: 63 KICLAATCHRGRLGCAYYEPVQATVYVLEDTNDS-VHFDLTKMLFEQANPDIVLTGSRAD 121
Query: 62 ESFLSALK----RSDG---------------------------TTEAPTVKLVKSSIFSY 90
+ F+ L+ S G +E P V S++
Sbjct: 122 DEFIDLLRDLVDASSGRFTIRPWKDFAAPKGRERLLCLPMLLNLSEDPQGGDVVSTVSGS 181
Query: 91 EQAWHRLIYLRVTGMDDGLSIKER----ICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
+ + +++ G + +R I N S + + + LL L ER +
Sbjct: 182 SEPRNAYDFMQRRREVHGDPVMQRWNAGIRLANFTDPSDSPLCMGSIAALLDHLARERAI 241
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
LE + G ++ + ++ VSL + +++++ A +LQIF+ + H S + + KEG S+
Sbjct: 242 GDLEPE--GLGALDVRAIKSVSLEQVMQINSDALSSLQIFENESHAS-IHSDKTKEGLSL 298
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM--ASLHETLKYVK 264
FG++N +GR LLR W LRP L E + +R +A+ F E L S+H LK +K
Sbjct: 299 FGILNNTRMSLGRALLRQWLLRPSLSFEVIQARHDAVECFSRPENLTTAGSMHAHLKGIK 358
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSI--CSLLH-----VNKIFEVGISESLREQLRLL 317
++P + + +W +K +LH +N+ +V I + L E L +
Sbjct: 359 NLPRFMANLRAGR--AGVIEWQGLVKFAFHAVMLHDVIQELNQARQVLIIQKLHEVLDVA 416
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
F ++ E + ID S E +R +ELD L+ IY +
Sbjct: 417 AFRVI--------------GETINNTIDWEESDEAKR-VCIRPQVDEELDNLKHIYHGID 461
Query: 378 EFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEF 433
L VA +P +VP +VY Q+G+L+C+ EE ++ L G+ F
Sbjct: 462 SVLSNVAEQICASIP----PDYVPSLNVVYFPQLGFLICLPMLEEWKSGQDIQVLDGWSF 517
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
FS +++ +P+ R++D +GD+ I+D E I + L+ + + + + A +
Sbjct: 518 QFS----SESHVYFKSPEMRDMDTHIGDLQPSIVDREIEIAQSLLEQLLAYDNAICDACH 573
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR-----------------HVLQEM 536
AELDC LS A V+ +Y RP + ++ I+ GR H LQE
Sbjct: 574 VCAELDCLLSFAEVSRALDYRRPTMVERNVIHIKQGRQVLPTICHTLAAHPSDRHPLQEQ 633
Query: 537 TVDTFIPNDTRI---------------DND----GRINIITGPNYSGKSIYIKQVALIVF 577
VDTF+PND I D+D + I TG N GKS+Y+KQ A+I F
Sbjct: 634 VVDTFVPNDVTITGGAGLGVLQGLPVEDDDVPLGNSVVICTGANACGKSVYLKQTAVIQF 693
Query: 578 LSHI-GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ + SFVPA++AT+G+ D ++ ++ QS+FMIDL+QV + LR AT++SL L
Sbjct: 694 MAQMMCSFVPAESATLGIVDKIFTRIQTTESVSKVQSAFMIDLNQVSLALRNATARSLIL 753
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLT-----ELLNEGCLPKSERL 682
LDEFGKGT++ DG GL G I + ++ PKV+ TH ELL+ G LP + L
Sbjct: 754 LDEFGKGTISTDGAGLFCGVIKHLLSRGAACPKVMATTHFPEIFDRELLDVGALPIT--L 811
Query: 683 KFYTMSVLRPENNSTDV---------EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
+ V + N + E I +LYR+ G ++ S+ CA L G+P +++
Sbjct: 812 SHMEVLVTSSDGNIANEPGQFAIKPGEKITYLYRVANGLSVESHATMCAELFGIPRRIVE 871
Query: 734 RAAYV 738
RA YV
Sbjct: 872 RAQYV 876
>gi|406862845|gb|EKD15894.1| mismatch repair protein 5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1082
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 237/799 (29%), Positives = 378/799 (47%), Gaps = 87/799 (10%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
VG +YY + +L ++E + + D ++D +K QP I ST+S+E L +
Sbjct: 224 VGCAYYVARDEKLCLMEDIKMAGLD--IVDTLKVHIQPTTILISTRSDEKLEEHLSKDAR 281
Query: 74 TTE----------APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSI------------ 111
E A + S FS E A +L+ L + DDGL+I
Sbjct: 282 GIERGGEANDIFGAYVLDARPSPEFSSEGAKSKLVGLDLA-TDDGLNIAFTTPGDAMIED 340
Query: 112 -----KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
+ R+ L +D+ SEV + +G +L + + V+ L + + I ++
Sbjct: 341 ASMGRQGRLMRLAGWIDLDSEVTIGCAGAVLHYIGRRKNVEYLPNDGAALIAFRIRTIEM 400
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHP-SHM-----GIGRAKEGFSVFGMMNKCV-TPMGR 219
+L+ + ++ +LQI Q++ HP SHM AKE SV+G+ ++ TP G+
Sbjct: 401 FTLSDMMFVNVDTLASLQIIQSEIHPNSHMQGPNNPSSGAKESLSVYGLFSRLARTPQGK 460
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIP----HILKKF 273
+ LR FLRP DL + RL I+ FL E + + L ++LK +KDI H+ K
Sbjct: 461 QKLRQLFLRPSTDLAVIEERLRTIAVFLLPENMPTIEKLSQSLKMIKDIRSVMVHLQKGI 520
Query: 274 NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
++ + ++ A+ HV +I E I E Q + ++ K E+
Sbjct: 521 SNTTGNGSSIRRGAWANIQNFTFHVLRILEA-IQEMAGNQTLAITTKMLAKIQGARMNEI 579
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
++ ++D S E+ + T V +GF ELD +++ Y+ + FL VA+ +P
Sbjct: 580 G---TMITDVVDFQMSAEQ-HRTTVLQGFDAELDSIKRTYDSMDTFLTRVATQLSSDIPE 635
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF-AFSDMDGETKRLFYHTPKT 452
+ CI + Q+G+L + + + +G E A+ M +Y +
Sbjct: 636 WASQYVSNCI-FFPQLGFLTVVPLDLETGKGKYEGEGIENDAWEKMFTSNDMGYYKNKRM 694
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+E+D GD+Y I D E I L I L+ A + ELD ++LA A + +
Sbjct: 695 KEMDEYFGDMYGMICDREIEILHGLGVRILEHEKLLIAASDLCGELDSLVALAAGARKYD 754
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRIN---------------- 555
Y P + L I+ GRH LQE+TV +I ND + G +N
Sbjct: 755 YNPPRVITANSLQIEGGRHPLQELTVPVYIANDCFVTGGAGNMNEVDEVQYPSVSPSAVH 814
Query: 556 ---------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------K 598
I+TGPNYSGKS+Y+KQ ALIV+++HIGS+VPA A +GLTD +
Sbjct: 815 QSGENSGMLIMTGPNYSGKSVYLKQNALIVYMAHIGSYVPAQKAIIGLTDKILTRIATRE 874
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP 658
++ QS+FMID+ Q+ + L ATS++L ++DEFGKGT DG GL G +Y +
Sbjct: 875 SVSRNQSAFMIDVQQIALALTLATSRTLLVIDEFGKGTNASDGAGLCCGVFDYLLNLGAN 934
Query: 659 -PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLS 716
PKVL TH E+ G L + L F M V R + ++ VED + +LY +PG + S
Sbjct: 935 RPKVLGATHFHEIFENGFLQERPGLFFGHMEV-RVDTHAETVEDQVTYLYNFMPGRSTSS 993
Query: 717 YGLHCALLAGVPAEVIKRA 735
+G CA + G+ +++RA
Sbjct: 994 FGTCCAAMNGIDPAIVERA 1012
>gi|32442444|gb|AAP82280.1| MSH5 [Coprinopsis cinerea]
gi|33151074|gb|AAP97415.1| msh5 [Coprinopsis cinerea]
Length = 930
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 243/830 (29%), Positives = 395/830 (47%), Gaps = 124/830 (14%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
Q+ +A RVGV+YY+ +HVLE +++ F L ++ Q QP I+ TS+KSE
Sbjct: 64 QICLAAFCTHGRVGVAYYEPVKGVIHVLEDTQET-VHFDLTRLLLEQIQPDIVLTSSKSE 122
Query: 62 ESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYL-RVT-------GMD------ 106
++F+ L+ D T ++ K FS ++ RL+ L R++ G D
Sbjct: 123 DAFIDVLRDHMDATGGLFQIRPFKE--FSPKRGRERLMSLSRLSELPVENDGPDLTMSDP 180
Query: 107 DGLSIKERICY----------------LNSMMDMGSEVQVRAS-------GGLLAVLENE 143
D S + R Y N+ + + + S G L+ L +
Sbjct: 181 DSHSSRSRNAYDFMRRQGHDTDPTAQRWNAAIRLANFTSAETSPFCVSSIGSLIDHLVRQ 240
Query: 144 RIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG 203
R + G + I + +++++ + +++ A +LQ+F+T+ H S + + KEG
Sbjct: 241 RAASDFDG--DGINDLDIRDIQTLAVDQVMHINSDALLSLQVFETESHAS-VHSDKTKEG 297
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS--LHETLK 261
S++G++N T +GR+LLR W LRP L + + SR +A++ F+ E + + +H LK
Sbjct: 298 LSLYGILNSTKTNLGRQLLRTWLLRPSLSISTITSRQDAVACFMRPENITTANLMHNHLK 357
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+K++P ILK S SDW F+K H + ++L E + I
Sbjct: 358 GIKNMPKILKALTSGR--AQLSDWQGFVKFT---FHTTML-----RDALSELHGAADVQI 407
Query: 322 VEKAASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
V+K S + ++A E V ID S VR +ELD + Y +
Sbjct: 408 VKKLISAL--DVATFKETGGKVNDTIDWEEST-NAERVCVRPRIDEELDNWKHAYHGIDS 464
Query: 379 FLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI-FEEKLDDTTLEQLQGFEFAF 435
L VA Q+ P +VY Q+GYL+C+ ++ ++G+ F F
Sbjct: 465 VLSTVAE----QISQTVSPDIAPSLNVVYFPQLGYLICVPMRQEWQAGGTPAVEGWTFQF 520
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
S +++ + + ++D +GD++ I+D E I ++L+ + ++ + A +
Sbjct: 521 S----SEAHVYFKSQEMHDMDIHIGDLHSTIVDRELEIIQELLEEMLTHTEAMSNACDVC 576
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI------- 548
AELDC LSLA + NNY+RP + + +++I GRH L E +D F+ ND R+
Sbjct: 577 AELDCLLSLAQASRTNNYVRPEIVQDSVIEIVGGRHPLHEQILDAFVANDARLVGGAGLN 636
Query: 549 ---------DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS-- 597
D+ I + TG N GKS+Y+KQ+ALI ++ IG FVPA+ AT+G+ D
Sbjct: 637 SQPEGLEDEDDWNSILLCTGANACGKSVYMKQIALIQIMAQIGCFVPAERATLGIVDKIF 696
Query: 598 ------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
+ ++ QS+FMIDL+QV + LR T +SL LLDEFGKGTL+ DG GL G + +
Sbjct: 697 TRVSTRESVSKAQSAFMIDLNQVSLALRNCTPRSLILLDEFGKGTLSTDGAGLFCGVLMH 756
Query: 652 FV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYT--MSVLRPENNS----TDVED 701
+ C P VLV TH E+ L E L M V+ ++ +DVE
Sbjct: 757 LLERGPAC---PMVLVATHFHEVFTRDLL-DVENLPITCCHMQVMFTLDSDSVCESDVES 812
Query: 702 -------------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
I +LYR+ G + S+ CA + G+PA ++ RA +V
Sbjct: 813 VRGSVVHVGPRDKITYLYRVARGLSADSHAAQCAAMFGIPARIVSRAQHV 862
>gi|330924338|ref|XP_003300600.1| hypothetical protein PTT_11889 [Pyrenophora teres f. teres 0-1]
gi|311325175|gb|EFQ91292.1| hypothetical protein PTT_11889 [Pyrenophora teres f. teres 0-1]
Length = 963
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 236/814 (28%), Positives = 394/814 (48%), Gaps = 105/814 (12%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
VG YY + +++ +E + + D +++ +K +P +I STK ++ +
Sbjct: 104 VGCCYYVARDEKMYFMEDIQCGDVD--IVESLKTFIEPTVILVSTKVDDKVIECFDPEAR 161
Query: 74 TTEAPT-----------VKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIK---------- 112
+ E+ + +++ S F YE A +L+ LR+ G ++G ++
Sbjct: 162 SGESSSGDNDQFRLPYLLEVRPPSEFYYESARTKLLSLRL-GEENGTRVRFNVPGELPVA 220
Query: 113 ------------ERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT 160
++ L +D+ S V +G L++ L+ L + +
Sbjct: 221 NHHEEESFVGQQGQLLRLAGWIDLESRSTVGCAGALISYLQRRCAASYLPGDHTAHLMFR 280
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SH-MGIGRA----KEGFSVFGMMNKCV 214
I ++ ++ + + +++ +LQI + HP SH G +A KEG SV+G+ +
Sbjct: 281 IATLEMFTIRETMFINSDTLHSLQIMGAESHPHSHNKGPTKASSGEKEGLSVYGLFHHLA 340
Query: 215 -TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS--EELMASLHETLKYVKDIPHILK 271
TP GR LLR FLRP L+L+ +N RLN + F S E + +L + LK + ++ ++
Sbjct: 341 RTPQGRFLLRQQFLRPSLNLDIINERLNTVGVFTRSDNESALQTLVQNLKNIGNMRVVMI 400
Query: 272 KFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT 331
+ F KSI + + + I ++L+E +L ++V +TT
Sbjct: 401 NLRK-GVGGSTKGAGGFSKSIWTSIRAFAFHALKIKDTLQE---VLGGELVVIKNKVLTT 456
Query: 332 ----ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
LA + + ID+ S E+G T++ G +ELD+++ + L +FL +VA
Sbjct: 457 FEGYHLAQIGRKISETIDLKSSAEQGR-TVIMPGVDEELDQMKLTLDSLDDFLNQVARKL 515
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
++P + ++Y QIG+L C + T F+ + M +++++
Sbjct: 516 SERMPSDLRATL--NVIYFPQIGFL-CTTPVDPETGTAVYDGSFDNPWERMFSTEEQVYF 572
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
+TRE+D+ GD+Y I D E I+ +L ++ + + L + ELD L+LA
Sbjct: 573 KNSETREMDDHFGDVYGIISDREIEISHELAQYLLQYQELLTSCSDVCGELDSLLALAQG 632
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI------------------- 548
A + RP +T E ++ I+ GRH+LQE+TV +FI NDT +
Sbjct: 633 AKKYKLCRPRMTDENIIHIKGGRHILQELTVSSFIANDTILRGGEGDLAHAEASAQRYGA 692
Query: 549 -----------------DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT 591
DN + ++TGPNYSGKS+Y+KQVALIV+++HIGSFVPAD+A
Sbjct: 693 ESQPFTSSSNRHTYVHKDNPSML-VLTGPNYSGKSVYLKQVALIVYMAHIGSFVPADSAK 751
Query: 592 VGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIG 643
+G+TD S+ T E QS+FMIDL Q+ + L AT +SL ++DEFGKGT T DG G
Sbjct: 752 IGITDKILSRVTTRETVSRIQSAFMIDLQQISLALSLATRRSLLIIDEFGKGTETSDGAG 811
Query: 644 LLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED- 701
L + + + PKV+ TH E+ G L L F + V R + N+ +V D
Sbjct: 812 LACAVMEHLLNLGSERPKVIGTTHFHEIFERGLLKPRPALAFGYLEV-RIDTNAVEVNDQ 870
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
I +LY G + S+G CA + GVP E+I+RA
Sbjct: 871 ITYLYNFREGRSTSSFGTCCAAMNGVPPEIIQRA 904
>gi|345562132|gb|EGX45204.1| hypothetical protein AOL_s00173g305 [Arthrobotrys oligospora ATCC
24927]
Length = 1028
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 246/832 (29%), Positives = 387/832 (46%), Gaps = 114/832 (13%)
Query: 3 VYMACILHGHRVGVSYY---DSSIRQLHVLEV---WEDSNSDFPLIDIVKYQAQPQIIYT 56
V MA G R+G S+Y D ++ ++ +EV + +++ +++Q QP +
Sbjct: 138 VIMAIDYRGRRLGCSFYTEQDETLWFVNDIEVNIFGSSGGAAREVLESLRFQIQPTAMLF 197
Query: 57 STKSEESFLSALKRSDGTTEAPTVKLV--KSSIFSYEQAWHRLIYLR------------- 101
+++++ F S+ SD P V L + FS EQ ++L L
Sbjct: 198 PSRADDLF-SSNTDSDTLESYPGVDLSIRPAPEFSVEQGRNKLSNLDFESNDEYATFITP 256
Query: 102 --VTGMDD----GLSI--------KERICYLNSMMDM-GSEVQVRASGGLLAVLENERIV 146
MDD GL K+ + L S +D G+ V V +G +L + R +
Sbjct: 257 NDTNAMDDDDEYGLGPMPGRATGKKQTMLRLESYIDTEGNYVSVGCAGAVLLNVRRRRAI 316
Query: 147 DT----LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS---HMGIGR 199
+ E G + + + ++ + L+A +LQIF + HPS GR
Sbjct: 317 QNPHIEVSPDECGVSRLKL-----WTMENTMFLNADTMTSLQIFSDESHPSFHKQGPHGR 371
Query: 200 AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLH 257
KEG S+FG++N TP G + L+ FLRP LD + SR NAI + + + +H
Sbjct: 372 GKEGLSLFGIVNTTRTPQGYQCLKQMFLRPSLDSGVITSRYNAIKTLIRPDNSNAVGGIH 431
Query: 258 ETLKYVKDIPHIL---KKFNSPS---------FIYTASDWTAFLKSICSLLHVNKIFE-V 304
++LK + DI IL KK S F + ++ SLLH ++ V
Sbjct: 432 KSLKKIPDIRKILIMLKKGGESSGNGMLGDVEFGAKRKARSTSTRTWNSLLHF--VYNTV 489
Query: 305 GISESLREQLRLLNFDIVEKAASCIT-TELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
I + E L L+ ++ K A L + +++ +D S+ +G V+ G
Sbjct: 490 KIRNYVAEMLGTLDIEVFRKIADAFEIVHLQNIGKMIDDTVDFEESQYQGR-VCVKPGVD 548
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC-IVYIHQIGYLMCI------- 415
+LD ++ Y L +VA + QLP K + +VY Q+GYL+CI
Sbjct: 549 SDLDAIKDTYNSFDYMLGDVAKEIMNQLPPKIKTTGLNLNVVYYPQLGYLICIPLGPDKE 608
Query: 416 --FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ D+ + + +++ FS ++ + +TR+L+ LGDI+ I D E I
Sbjct: 609 PVYSGSNDEDDI--MNKWDWMFS----TAHSAYFKSQRTRDLEESLGDIFGAICDKEIDI 662
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + + D L + ELD LSLA A +++ RP++T ++ I GRH L
Sbjct: 663 LHELQEKVMKYKDLLTSISSICGELDSILSLAQAAMTHHWTRPLITEGNIIRIHKGRHPL 722
Query: 534 QEMTVDTFIPNDTRIDNDGRIN---------------------IITGPNYSGKSIYIKQV 572
QE+ V FIPNDT ++ G N I+TGPNYSGKS+Y+KQV
Sbjct: 723 QELCVAAFIPNDTNLEGGGGENSDLNNPPHSPLDNDQASKSMMIVTGPNYSGKSVYLKQV 782
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV+++HIG +VPA+ AT+GLTD+ + +T QS+FMIDL Q+ LR A+ +
Sbjct: 783 ALIVYMAHIGCYVPAEHATIGLTDAILTRIQTKESVTKTQSAFMIDLQQIAAALRLASRR 842
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLK 683
SL ++DEFGKGT + DG GL + + PK L+ TH E+ G L L
Sbjct: 843 SLLVVDEFGKGTESTDGAGLACAIAEHLLELGSDAPKTLMATHYHEIFENGFLVGHPSLS 902
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ M +L E I +LY L G + S+G CA + G+ ++ RA
Sbjct: 903 YGHMRILLDETAEKAQNQITYLYTLEQGRSTSSFGTVCAAMNGIDKAIVDRA 954
>gi|121701769|ref|XP_001269149.1| DNA mismatch repair protein Msh5, putative [Aspergillus clavatus
NRRL 1]
gi|119397292|gb|EAW07723.1| DNA mismatch repair protein Msh5, putative [Aspergillus clavatus
NRRL 1]
Length = 854
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 206/676 (30%), Positives = 351/676 (51%), Gaps = 63/676 (9%)
Query: 108 GLSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
G +++E R+ ++ S +DM + V V +G +LA L+ R +++ S + + + SV
Sbjct: 129 GFTLQEGRLLHMASSIDMENTVTVGCAGAVLAYLQRRRTTESMTSIGSVD-NFQVRSVEM 187
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNKCV-TPMGR 219
SL + ++ + +LQI +++ HPS + G G+ +KEG SV+G+ + TP GR
Sbjct: 188 FSLTGTMFVNKSTLLSLQITESESHPSMLNQGPGKKSFSSKEGLSVYGLFQRFAHTPQGR 247
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILKKFNSPS 277
LLR F+RP ++++ + R I+ +L + A L ++LK++K++ ++ N
Sbjct: 248 NLLRQLFVRPSVEMDTIRDRHEFITVYLRQDNYNALDKLVKSLKHIKNLRPVM--INLRK 305
Query: 278 FIYTAS-DWTAFLKSICSLLHVNKIFEVGISESLRE-------QLRLLNFDIVEKAASCI 329
I T S T F ++ + L + + I ++L+E LR +E A
Sbjct: 306 GISTGSAKITGFKTTVWATLLAFAFYGIDIHDALKETSGGNLLSLRTRALRTLEAA---- 361
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
+L V ++ I+D++ S+++G T+V+ G ELD ++ Y+ L + L+EVA
Sbjct: 362 --QLYRVGRMIQEIVDIDCSEDQGR-TVVKPGLDRELDRMKDTYDGLNDLLKEVAIEIAT 418
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
+P ++Y Q+G+ + + LDD G + + R ++
Sbjct: 419 GIPESLD--IDVNVIYFPQLGFNIAV---PLDDKGEASYSGIADDWELIFITENRAYFKD 473
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
+ RE+D LGDIY I + E I DL + + + L++A ++D L++A +
Sbjct: 474 FRMREMDESLGDIYGLICEKEIEIVYDLAQRVLQYEEALIEASEICGQIDSLLAMAQASS 533
Query: 510 QNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT-----RID--------------- 549
+RP + E ++ I+ GRH+LQE+T+ +++PNDT R++
Sbjct: 534 FYKLVRPRMVKENVIKIEGGRHLLQELTISSYVPNDTFLVGGRLEPGSPASQADGTALSE 593
Query: 550 --NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KH 599
+D + I+TGPNYSGKS+Y+KQVALIV+L+ +GSFVPA+ A +G+TD +
Sbjct: 594 ATHDPSMLILTGPNYSGKSVYMKQVALIVYLAQVGSFVPAERAEIGITDKILVKMNSQES 653
Query: 600 MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPP 659
++ QS+FM DL Q+ LRQ T +SL L+DEFGKGT DGIGL G + + ++ + P
Sbjct: 654 VSKIQSTFMNDLQQISFDLRQVTGRSLLLIDEFGKGTNESDGIGLACGILEHLLSLEDAP 713
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
KV+ TH E+ L RL+F M V E + + I +LY G + S+G
Sbjct: 714 KVIAATHFHEIFENAFLRSRPRLQFGHMEVRLSEESHQMEDQITYLYNFRLGRSNKSFGT 773
Query: 720 HCALLAGVPAEVIKRA 735
CA + G+ ++ RA
Sbjct: 774 ICAAMNGISPAIVDRA 789
>gi|409042325|gb|EKM51809.1| hypothetical protein PHACADRAFT_262157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 947
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 243/843 (28%), Positives = 404/843 (47%), Gaps = 132/843 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++Y+A RVG +YYD + ++VL+ +++ + L ++ QAQP ++ TS+K E
Sbjct: 63 KLYLAVNAQFGRVGGAYYDPTTCTIYVLDDSQETGH-YDLTKMLLDQAQPDVVLTSSKGE 121
Query: 62 ESFLSALKR-SDGTTEAPTVKLVKSSIFSYEQAWHRLIYLR-----------VTGMDDGL 109
+S + L DGT + V+ K F + R++ LR V G+
Sbjct: 122 DSCMDILHSYMDGTGGSFQVRPHKD--FIPAKGRDRILSLRLLSELPEDRHIVEGLPSSS 179
Query: 110 SIKE-RICY-----------------LNSMMDMGSEVQVRAS-------GGLLAVLENER 144
S E R Y N+ + + + + S G LL L R
Sbjct: 180 SEDEPRSAYDFMRRRKETTGDPNLQKWNACIRLANYASIEGSPLCLGSVGALLDHLSKVR 239
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGF 204
++ L + G + + I ++ ++ ++++A A +LQ+F + H S + + KEG
Sbjct: 240 VIGELH--DEGISGLDIRAIQYLAFRDVMQINADALYSLQVFDNESHAS-IHSDKTKEGL 296
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKY 262
S+FG+++ T +G+ LLR W LRP L + + +R +A++ F+ E + S+H +K
Sbjct: 297 SLFGILDYTKTSLGKALLRQWLLRPSLSRDVIVARHDAVACFIRPENATTIESMHVHMKG 356
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
+K++P IL S SDW + +K V + E+L E +IV
Sbjct: 357 IKNVPKILAVIKSGR--AKVSDWQSLVKF--------AFHSVMLHEALSELDYSGRVEIV 406
Query: 323 EKAASCI-TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
K + + YV +V ID S+ VR ++LD+L+ IY + L
Sbjct: 407 RKLCKVLDVAGIRYVGNVVNETIDWEESRNAAR-VCVRPHIDEDLDKLKHIYHGIDTVLS 465
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI-FEEKLDDTTLEQLQGFEFAFSDMDG 440
+VA +P +VY Q+G+L+C+ ++ + ++ ++G+ F FS
Sbjct: 466 KVAERVSATVP--IDYATTLNVVYFPQLGFLICVPMQDDWRENGVDVMEGWSFQFS---- 519
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
++++ + + +LD +GDI+ I+D E I ++L+ + + + A + AELDC
Sbjct: 520 SDVQVYFKSQEMHDLDRHIGDIHSSIVDREIEIVQELLERVIKYEQEMTAACDMFAELDC 579
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI------------ 548
LS A + ++ +P L+ E ++ I+ GRH LQEM VDTF+PNDT +
Sbjct: 580 LLSFAEASRALDFHQPELSDENVIIIKQGRHPLQEMVVDTFVPNDTFLIGSDCSPEVAEA 639
Query: 549 -----DNDGRIN-------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
D D + I TG N GKS+Y+KQVALI +++ IG F+PA +A +G+TD
Sbjct: 640 LSEEHDLDDSVKGCKNSVMISTGANACGKSVYLKQVALIQYMAQIGCFIPAQSAILGITD 699
Query: 597 ---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
++ T E QS+FMIDL+QV + LR +T +SL LLDEFGKGT++ DG L G
Sbjct: 700 RIFTRIQTRESVSRVQSAFMIDLNQVSLALRDSTERSLILLDEFGKGTVSSDGAALFCGV 759
Query: 649 INYFV----TCDVPPKVLVCTHLTELLNEGCL-PKSERLKFYTMSVL------------- 690
+ + + +C PKV+ TH E+ EG L P + F M VL
Sbjct: 760 LKHLINRGSSC---PKVIAATHFHEVFQEGMLDPGELPVTFVHMQVLLTSSRGEVLGIST 816
Query: 691 ---RPENNSTDVED------------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
E+ +T+ +D I +LY++ G + S+ CA L G+P + +RA
Sbjct: 817 SEASTESGATEDDDMREGNAMRPSERITYLYKIGRGLSKHSHAAVCAELFGIPRPIARRA 876
Query: 736 AYV 738
YV
Sbjct: 877 QYV 879
>gi|402086418|gb|EJT81316.1| DNA mismatch repair protein MutS [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 968
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 241/812 (29%), Positives = 399/812 (49%), Gaps = 95/812 (11%)
Query: 3 VYMACILHGHR-VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
V +A L G+ G + Y S+ H+L + +D++ L+D++ QAQP +I ++
Sbjct: 79 VILALELRGNGGFGSALYTSA--DEHLL-IQQDTSGGLELVDLLLIQAQPTVIIIPNRAS 135
Query: 62 ESFLSALKR----SDGTTEAPTVK------LVKSSIFSYEQAWHRLIYLRVTGM------ 105
+ ++ L++ DG++ T+K + SS F A RL L++ +
Sbjct: 136 DELVAYLEKLTPGIDGSSREGTMKGAYVLQAIGSSEFDPHTAKARLAKLKLDTLGHPDLL 195
Query: 106 -------------DD--GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLE 150
DD L + L S++++ S + V +G ++ L+ D L
Sbjct: 196 MTTASEYDPMDTEDDRPRLGQVQASLRLGSLINLQSHLSVGCAGAVIGELQRRTASDYLA 255
Query: 151 QKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHM------GIGRAKEGF 204
Q + ++ +I +V +L + ++ +ALQI ++++HP++ G AKE
Sbjct: 256 QDPAAASAYSIMAVNLFNLADLMLVNQDTLDALQIIRSERHPNNQMNNPSRGDSGAKESL 315
Query: 205 SVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLK 261
SV+G+ + TP G+ L+ FL P ++E + + ++ + E E L + LK
Sbjct: 316 SVYGLFQRHACTPQGKLKLKQAFLCPSTNMELIREKHRTVAVLMRPENTETYNLLTKKLK 375
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
++++ ++ N + S T+ +++ L F V I +R L+ ++
Sbjct: 376 MIRNMKTVMG--NVQKGVDKPSAQTSAKRNVWQSLQYFSKFSVEIFGLVRT---LVGGEV 430
Query: 322 V-EKAASCIT--TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
+ KA+ I E+ + ++V +D S E T+V G LD+L + +
Sbjct: 431 IGTKASGAIVKPAEMMKIGKMVSDTVDFEAS-EVANKTVVCHGVDQVLDQLNHRFNGMES 489
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
FL EV ++ +P ++ C VY HQIG+L ++ +D T E L +E SD
Sbjct: 490 FLVEVTRRVVIDVPLESRQYIQQC-VYYHQIGFLTVVY---VDPDTGEPL--YEGPGSDP 543
Query: 439 DGETKRLF-------YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
+G +R F + RELD + GDI +I E I L + D +L
Sbjct: 544 EGYWERKFVDENNMHFKNHHMRELDEVYGDIVSQINGREIEILHRLRLEVMACKDAILST 603
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--- 548
NF ELD F++LA AHQ N P +T E ++DI++GRH+LQE+ V +FI ND ++
Sbjct: 604 SNFWGELDSFVALAGAAHQYNLSAPEMTDENIIDIKDGRHLLQELVVPSFIANDCQLVGG 663
Query: 549 ----------DNDGR----INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGL 594
DG I I+TGPN+SGKS+++KQVALIV+L+H+GSFVPA++A +G+
Sbjct: 664 SGNEDMQAPDSQDGEKTPNILILTGPNHSGKSVFLKQVALIVYLAHVGSFVPAESARLGI 723
Query: 595 TDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLG 646
D + +T ++S+F D+ Q + AT +SL L DEFGKGT DG L
Sbjct: 724 VDKILTRITTRESVTGDESAFATDIRQAAFAMNHATCRSLVLADEFGKGTNAIDGAALAA 783
Query: 647 GTINYFVTCD--VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G YF T D PKVL TH E+ + L ++ + + M V R ++ +++ E+ I
Sbjct: 784 GLFWYFATRDEATRPKVLAATHFHEIFEQHVLDETPNIGYAHMDV-RIDSEASERENQIT 842
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
FLY LVPG + S+G CA + GV ++KRA
Sbjct: 843 FLYSLVPGRSTSSFGAWCAWMNGVDENIVKRA 874
>gi|449548553|gb|EMD39519.1| hypothetical protein CERSUDRAFT_111843 [Ceriporiopsis subvermispora
B]
Length = 951
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 245/839 (29%), Positives = 393/839 (46%), Gaps = 125/839 (14%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
+V MA R+G ++YD ++VL + N F + V QA P ++ +S+K++
Sbjct: 74 KVCMAISCQFGRIGCAFYDPIKCTVYVLADTHE-NKHFDVTKSVLEQASPDVVLSSSKAD 132
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM 121
++ + L R T ++ FS + R++ L++ ++ ++SM
Sbjct: 133 DNCMDIL-RDQMDASGGTFQVRPHKDFSPAKGRDRILSLKLLSELPAEQLEHSSSDIDSM 191
Query: 122 MDMGS--------------------EVQVRAS---------------GGLLAVLENERIV 146
+ S VR + G LL L R +
Sbjct: 192 SEARSAYNFMRQRRDVIGDPTAQRWNASVRLANYASIDTAPLCLGSVGALLDHLARTRAI 251
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
LE + G + I S+ + L++ ++++ A +LQIF + H S + + KEG S+
Sbjct: 252 ADLE--DEGIEGLGIRSIEALPLSQSMQINTDALFSLQIFSEENHAS-IHSDKTKEGLSL 308
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS--LHETLKYVK 264
FG++N +GR L+R W LRP LE + +R +A++ FL E L S +H LK VK
Sbjct: 309 FGILNSTKMTLGRLLMREWLLRPSTSLEVIQARHDAVACFLRPENLATSGVMHAQLKGVK 368
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
+IP IL + SDW +K + +L+ + + E+ + + +LL D ++
Sbjct: 369 NIPKILGVMKAGK--GKVSDWQVLVKFTFHALMLRDALTELNHTSGVPILKKLL--DALD 424
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
A + L+ ID S G VR +ELD L+ IY + E L V
Sbjct: 425 SAC------FREIGTLINETIDWEESTNAGR-VCVRPHVDEELDNLKHIYHGIDEVLSRV 477
Query: 384 AS-LELVQLPHLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEFAFSDMDG 440
A + P + V VY Q+G+L+CI +E D + L+G+ F FS
Sbjct: 478 AQQISTTVPPDYATSLNV---VYFPQLGFLICIPMLDEWKGDEGITILEGWIFQFS---- 530
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
+++ + + +++D+ +GD++ I+D E I + L+ I L+ + L A + AE+DC
Sbjct: 531 SESHVYFKSQEMQDMDHHIGDLHPSIVDREIEIIQALLEKILLYEEALCHACDICAEIDC 590
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPND----------TRID- 549
LS A + NY RP +T E +LDI+ GRH LQE+ VDTF+PND + I+
Sbjct: 591 LLSFAEASRAYNYRRPEMTNENVLDIKQGRHPLQELVVDTFVPNDAFAIGGAGIGSEIEH 650
Query: 550 --NDGR--------INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS-- 597
N G I + TG N GKS+Y+KQV LI +++ IG FVPA++A +G+ D
Sbjct: 651 HTNRGSLYEQEYNGIIVCTGANACGKSVYLKQVGLIQYMAQIGCFVPAESAVLGIVDKIF 710
Query: 598 ------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
+ ++ QS+FMIDL+QV + LR +T++SL LLDE GKGT++ DG GL G + +
Sbjct: 711 TRIQTRESVSKVQSAFMIDLNQVSLALRNSTARSLILLDELGKGTVSSDGAGLFCGVLKH 770
Query: 652 FVTCDV-PPKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPEN-------NSTDVE-- 700
PKV TH ++ N L P+S + F M VL ++ D E
Sbjct: 771 LAGRGTESPKVFAATHFHDIFNSDILEPRSLPITFVHMQVLLTTTQGNVLGMSAGDTETS 830
Query: 701 ---------------------DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
I +LYR+ G + S+ CA + G+P V +RA +V
Sbjct: 831 ARSGLEEHEEQETICPTRPSDKITYLYRVAKGLSFNSHAAVCAEIFGIPQRVARRAQFV 889
>gi|307193583|gb|EFN76321.1| MutS protein-like protein 5 [Harpegnathos saltator]
Length = 794
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 229/773 (29%), Positives = 374/773 (48%), Gaps = 73/773 (9%)
Query: 8 ILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSA 67
I + +G ++Y+ +L V++ D F + + Q +P+ + T + E FL A
Sbjct: 2 IWSNNHLGAAHYNILTSELSVMDDIYDDGVYFNITKALYRQCRPRHVITISGMSEEFLGA 61
Query: 68 LK---RSDGTTEAP---------------TVKLVKSSIFSYEQAWHRLIYLRVTGMDDGL 109
++ S+ T+ P ++++++ Y++ +HR+ L++
Sbjct: 62 IEALVTSETTSSDPGRSMTSSGSDGPARVSLQVMRKKEHGYDRCYHRVRCLKLQSEPMDA 121
Query: 110 SIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL 169
+ ER+ +L ++ S V + A G LL ++ L SG S S+ ++L
Sbjct: 122 NNAERLVFLQGFLNFRSIVMIHALGLLLIYVDQHWA--NLALNPSGKPSFV--SLTSLTL 177
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRA---KEGFSVFGMMNKCVTPMGRRLL---R 223
+ +D +EAL I HPS G A K+ S+F ++N+C + G + L
Sbjct: 178 RDIVMIDDDTYEALHIVHAKHHPSLFKCGDATSKKQSSSLFTLLNRCQSRPGTQFLWQVS 237
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL-KYVKDIPHILKKFNSPSFIYTA 282
P ++E LN+RL + F L E S+ ETL Y+K + + A
Sbjct: 238 KMLQHPTRNVETLNARLEVVEFCLKPEN--QSIVETLTSYLKHLYRLTNVTLDRCLAQQA 295
Query: 283 --SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
SDW K++ S++++ E R++ RL K +T E+ Y+ +
Sbjct: 296 KISDWRRLYKTVSSIIYI-----ADGCEKQRKKARLFG-----KIVDSVTNEVRYIKYFL 345
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I+D R KE G+ +VR LD+L LPE L ++ ++ + HL +
Sbjct: 346 EHIVDFGR-KESGHDFIVRSNVDSHLDKLHHTRSSLPETLTQMGQKDMQE--HLPPSVTT 402
Query: 401 PCIVYIHQIGYLMCIF---EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+VYI IGYL+ I DDT L L+ F+F +++ +Y +P +ELD+
Sbjct: 403 CKMVYIPNIGYLLAITGWNPSPGDDTDLPNLE-FKFVSNNIR------YYKSPGAKELDD 455
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+GDI +I E I V +I + + A+ AELD L+ +VA ++NY+RP
Sbjct: 456 TIGDILLRINKRETYIMLKFVKYINKHAAPIFSAIQLCAELDTLLAFHVVAREHNYVRPC 515
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDT-RIDNDGRINIITGPNYSGKSIYIKQVALIV 576
L + ++ ++ GRH LQE T TF+ NDT + + I+TGPN SGKS Y++QVALIV
Sbjct: 516 LVEQQIIAVEQGRHPLQEFTTTTFVCNDTYSRSGNSLVKILTGPNASGKSTYLRQVALIV 575
Query: 577 FLSHIGSFVPADAATVG-----LTDSKHMTA---EQSSFMIDLHQVGMMLRQATSQSLCL 628
F++HIG +VPA +AT+G LT MT+ S+F+ D+ Q+ L +T S+ +
Sbjct: 576 FMAHIGCYVPAKSATIGIVTHILTQLTSMTSVALSTSTFLEDMRQINSALYASTPNSIVI 635
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDEFG GT G+ LL +N F+ V P V V TH+ ++N LP+ ++ T
Sbjct: 636 LDEFGNGTSEVSGLSLLAAVLNNFIERGVNCPHVFVATHMHRVIN--MLPRDPMIEEQTF 693
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ + D + +LYRL+ GHA S+ A AG+ +VIKRA V +
Sbjct: 694 EFI-----TNDDGTVAYLYRLISGHATRSFAHAAARSAGLDEQVIKRALEVYD 741
>gi|255085222|ref|XP_002505042.1| MutS 5 [Micromonas sp. RCC299]
gi|226520311|gb|ACO66300.1| MutS 5 [Micromonas sp. RCC299]
Length = 947
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 297/623 (47%), Gaps = 81/623 (13%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMM-NKCVTPMGRRLL 222
+ E+SL +L++D A AL I + + HPS +G KE + +F + + CVTP GRR +
Sbjct: 278 IREMSLGGYLRIDDAARVALGIERLESHPSQY-VGCGKE-WGLFALAADACVTPAGRRTV 335
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNS--PSFIY 280
RNWF RP L+L++LN RL+ + +F + + + + +D +L ++
Sbjct: 336 RNWFRRPTLNLQSLNDRLDGVEYFKDNPGVRDDMRAIARRGRDAHAVLASMSARVDKATR 395
Query: 281 TASDWT---AFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAY 335
+W AFL+S LL E + E+ L D A T
Sbjct: 396 GVGEWRRLHAFLRSARDLL-----------EYVEERFVTLRAGEDFANAGAHANTGGFPA 444
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
V VR G C +LD+ R++Y LP+ LE+V + ++P +
Sbjct: 445 ASTYV---------------PSVRSGVCVDLDDAREMYRRLPDLLEKVRETIVREIPRVL 489
Query: 396 KEMFVP---CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK--------- 443
+ V +VY+ + G+++ L ++L EFAF E +
Sbjct: 490 RGRGVEDNLSVVYLPKTGFMLRCVGRALPPDIADELGECEFAFDKSSDEPELALAADFPL 549
Query: 444 ----------RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+Y T TREL + +GD+ + D+E +I RDL + S L +
Sbjct: 550 GPEGIQSSRYSAYYFTAATRELSDAVGDVLSDVHDLEASILRDLRRRVLSNSRLLRDVAS 609
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT----VDTFIPNDTRID 549
AE+D +SLA N RPIL +++ RH LQE T +PND R
Sbjct: 610 CVAEMDATMSLAAFTSSGNMRRPILHDGTEMNVVGARHPLQEATRAPECGAIVPNDFRCG 669
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKHMTAEQS---- 605
GRI ++TGPN SGKS+Y+K +A VFL+H+GSFVPA++A + L D S
Sbjct: 670 G-GRIAVVTGPNQSGKSVYLKSIAACVFLAHVGSFVPAESAFIPLVDRVFTRVGASRDGG 728
Query: 606 --------SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
SF D +V M T +SLC++DEFGKGT T DG+GLL G + Y
Sbjct: 729 GGGGGGGGSFAADCARVSQMCNGCTGRSLCVVDEFGKGTATADGVGLLAGFLRYLARSPT 788
Query: 658 PPKVLVCTHLTELL-NEGCLPKSER-LKFYTMSV-LR-PENNSTDVED--IVFLYRLVPG 711
PP LV TH TE + +E +P + R ++F TM + LR P + ED +VFLYR VPG
Sbjct: 789 PPIALVATHFTEFVRDESIVPTTMRPMQFLTMRIHLRSPPGYRSAGEDDSVVFLYRAVPG 848
Query: 712 HALLSYGLHCALLAGVPAEVIKR 734
+ +Y L CA AG+P V+ R
Sbjct: 849 VSSRAYSLRCARDAGLPGSVLAR 871
>gi|403416860|emb|CCM03560.1| predicted protein [Fibroporia radiculosa]
Length = 949
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 257/902 (28%), Positives = 415/902 (46%), Gaps = 156/902 (17%)
Query: 12 HRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
H +YYD + E ++ N + L + Q P I TS+K++E+F+ L R
Sbjct: 77 HASCCAYYDPVKCTIFAFEDMQE-NQHYDLAKALFEQCSPNIAITSSKADENFIDVL-RD 134
Query: 72 DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTG---MD----------DGLSIKERICYL 118
++ FS + R++ LR+ MD D S ++
Sbjct: 135 HLDASGGIFQIRPHKDFSPVKGRDRILSLRLLSELPMDAVHDFGSSDSDYTSAPNAYDFM 194
Query: 119 NSMMDMGSE-------VQVRAS---------------GGLLAVLENERIVDTLEQKESGN 156
D+G + +R S G LL L R V+ LE G
Sbjct: 195 RRRKDIGGDPTLQRWNASIRLSNFASVDGAPLCLGSIGALLDYLARVRAVEDLEN--DGI 252
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
+ I ++ + L++ ++++A A +LQIF+ + H S + + KEG S+FG++N T
Sbjct: 253 GGLEIRAIETLVLSQAMQINADALHSLQIFEEENHAS-IHSDKTKEGLSLFGIINHTKTS 311
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIPHILKKFN 274
+GR LLR WFLRP L + +R +A++ F+ + L + S+H +LK +K+IP +L
Sbjct: 312 LGRALLREWFLRPSLSPSVIAARHDAVACFMRPDNLAIIDSMHGSLKGIKNIPRMLGTLR 371
Query: 275 SPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLL----NFDIVEKAASCI 329
+ SDW +K ++ SL+ LRE L L + +IV+K +
Sbjct: 372 TGK--ARLSDWQGIMKFTVHSLM-------------LREALVGLHQANDIEIVKKLLDTL 416
Query: 330 -TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL 388
T + + G ID S G V+ +ELD+L+ IY + L +VA
Sbjct: 417 DTVTFRDIGNTINGTIDWEESANSGR-ICVKLHVDEELDKLKHIYHGIDAVLSKVAQQIS 475
Query: 389 VQLPHLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
V +P +VY Q+G+L+C+ EE ++ L G+ F FS ++
Sbjct: 476 VTVPPDYASSL--NVVYFPQLGFLVCVPLLEEWTAGDGIKVLDGWTFQFS----SESHVY 529
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ + + ++D +GD++ I+D E I + L I + + A + AELDC LS A
Sbjct: 530 FKSQEMHDMDTHIGDLHPSIVDREIEIVQSLSERIMASNVVMSHACDVCAELDCLLSFAE 589
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN----------- 555
+ N+ RP ++ + ++ I+ GRH LQE+ VDTF+PND + IN
Sbjct: 590 ASRAYNFTRPQISEQNVIHIKQGRHPLQELVVDTFVPNDAFVVGGAGINAAAEGYIDQNE 649
Query: 556 --------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KH 599
+ TG N GKS+Y+KQVALI +++ IG FVPAD+AT+G+ D +
Sbjct: 650 SEKGNSIIVCTGANACGKSVYLKQVALIQYMAQIGCFVPADSATLGIVDKIFTRIQTRES 709
Query: 600 MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED-----GIGLLGGTINYFV- 653
++ QS+FMIDL+QV + LR AT++SL LLDEFGKGTL+ G GL + +
Sbjct: 710 VSRVQSAFMIDLNQVSLALRSATARSLILLDEFGKGTLSAGSYRTYGAGLFCAVLKHLAM 769
Query: 654 ---TCDVPPKVLVCTHL-----TELLNEGCLP----------KSERLKFYTMSVLRPENN 695
C PKV TH +LL+ LP + R T S L + +
Sbjct: 770 RGSGC---PKVFAATHFHDVFTDDLLSSRSLPITFVHMQIMLTTSRGHLVTASGLSADED 826
Query: 696 STDVED-----------------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+D +D I +LYR+ G +L S+ CA ++G+P V KRA YV
Sbjct: 827 PSDTDDGSDSVQAGSRRIAPGERITYLYRVANGLSLNSHAALCAEVSGIPRRVTKRAQYV 886
Query: 739 LEAAQNNKHVERWSHENISAQDQQ----YKNAVEKMLAFDVLK--------GDLRLFFQD 786
+++ + R E+++ +Q+ ++ + LA+D+ GD++ D
Sbjct: 887 SNLLSSHE-LGRLLDEDMTEDEQKDLENAEDVCRQFLAWDLTMDRDHYDGIGDVKRMLAD 945
Query: 787 LL 788
+L
Sbjct: 946 VL 947
>gi|146322598|ref|XP_752482.2| DNA mismatch repair protein Msh5 [Aspergillus fumigatus Af293]
gi|129557747|gb|EAL90444.2| DNA mismatch repair protein Msh5, putative [Aspergillus fumigatus
Af293]
Length = 830
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 204/667 (30%), Positives = 349/667 (52%), Gaps = 51/667 (7%)
Query: 108 GLSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
G +++E R+ ++ S +DM + V + +G +LA L+ R D++ + + SV
Sbjct: 111 GFTLQEGRLLHMASSIDMENTVTIGCAGAVLAYLQRRRTTDSITTL-GFTGAYQVRSVEM 169
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNKCV-TPMGR 219
SL + ++ + +L I +++ H S + G GR +KEG SV+G+ + TP GR
Sbjct: 170 FSLKGTMFINRSTLLSLHITESESHLSMLNQGPGRKSPASKEGLSVYGLFQRFAHTPQGR 229
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPS 277
LR FLRP +++ + R + IS +L + + + + + LK++K++ ++ N
Sbjct: 230 NRLRQIFLRPSVEINVICERHDFISVYLRPDNYDALNKIVKGLKHIKNLRPVM--INLRK 287
Query: 278 FIYTAS-DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI-TTELAY 335
I T S T F ++ + L + + I ++L+E N ++ +A ++L
Sbjct: 288 GISTGSAKITGFKTTVWATLLAFAFYGIDIHDALKETFGADNLNLRTQALHVFEASQLYR 347
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
V ++ +D++RS+++G T+V+ G ELD ++ Y+ L + L+EVA+ +P
Sbjct: 348 VGRMIQETVDIDRSEDQGR-TVVKPGLDRELDRMKDTYDGLNDLLKEVATEIAATIPESL 406
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
++Y Q+G+ + + L+D G + + R ++ + RE+
Sbjct: 407 D--IDVNVIYFPQLGFNIAV---PLNDMGEAAYSGTADDWELIFVTENRAYFKDFRMREM 461
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
D LGDIY I + E I DL + D L++A + +D L++A A+ N +R
Sbjct: 462 DQSLGDIYGLICEKEIEIIYDLAQKVLQHKDALVQASDMCGHIDGLLAMAQAAY--NMVR 519
Query: 516 PILTLEPLLDIQNGRHVLQEMTVDTFIPNDT-----RIDNDGRIN-------------II 557
P + E ++ I+ GRH+LQE+TV +++PNDT ++ + R+ I+
Sbjct: 520 PRMVEENMIRIKGGRHILQELTVPSYVPNDTFLVGGSLETEIRVPQEVLENPHGPSMLIL 579
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMI 609
TGPNYSGKS+Y+KQVAL V+L+ +GSFVPA+ A +G+ D + ++ QS+FM
Sbjct: 580 TGPNYSGKSVYMKQVALNVYLAQVGSFVPAEKAEIGVADKILVKMNSQESVSKIQSTFMN 639
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
DL Q+ L+Q T +SL L+DEFGKGT DGIGL G + + ++ + PKV+ TH E
Sbjct: 640 DLQQISFDLKQVTGRSLLLIDEFGKGTNESDGIGLACGILEHLLSLEDAPKVITATHFHE 699
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVP 728
+ G L RL+ M V R + VED I +LY PG S+G +CA + G+
Sbjct: 700 IFQNGFLQPRRRLQLGHMEV-RISGKARQVEDQITYLYNFRPGRCSKSFGTNCAEMNGIN 758
Query: 729 AEVIKRA 735
++ RA
Sbjct: 759 QMIVNRA 765
>gi|431921563|gb|ELK18917.1| MutS protein like protein 5 [Pteropus alecto]
Length = 835
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 248/838 (29%), Positives = 402/838 (47%), Gaps = 105/838 (12%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
+++ + + +G++YYD+S +H + D S L+ V + PQ + TS K +E
Sbjct: 48 IHLCVLWNSGYLGIAYYDTSDYTIHFMPDAPDHES-LKLLQRVLDEINPQSVVTSAKQDE 106
Query: 63 S---FLSALKRSD-GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ FL L + + P + + + F E + RL+ + + D ++ E+I +L
Sbjct: 107 NMTQFLEKLASQEHREPKRPEIIFLPNVDFGLEISKQRLLSGNYSFIPDSMTTTEKILFL 166
Query: 119 NSMMDMGSEV--------------QVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
+S++ + QVRA GGLL + RI LE N S+ I
Sbjct: 167 SSIIPFDCLLSGILRFTPDAILISQVRALGGLLKFMGRRRIGVELEDY---NVSVPI--- 220
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
+ KF+ L + + + S + + ++N+C G +LLR
Sbjct: 221 --LGFKKFV---------LYVIYPNLNQSKVVLEALNR------ILNRCRCKWGEKLLRL 263
Query: 225 WFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIP----------HILKK 272
WF RP DL LNSRL+ I FFL + E+ LH L ++K++P ILK+
Sbjct: 264 WFTRPTQDLGELNSRLDVIQFFLLPQNLEMAQMLHRLLGHIKNVPVSPGWGVGRELILKR 323
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
SDW K++ S L + SL + ++L DI ++ + +
Sbjct: 324 MKLSH--TKVSDWQILYKTVYSALGLRDA-----CRSLPQSIQLFR-DIAQE----FSDD 371
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
L ++ L+ ++D S + T++ E+DE ++ LP FL EVA EL L
Sbjct: 372 LHHIARLIGKVVDFEGSHAANHFTIL-PNIDPEVDEKKRRLMGLPSFLTEVAWKELDNL- 429
Query: 393 HLCKEMFVPC--IVYIHQIGYLMCI----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
+ +P ++YI IG+L+ I F + D +E G +F F ++G +L
Sbjct: 430 ----DSRIPSCSVIYIPLIGFLLSIPRLPFMVEASDFEIE---GLDFMFL-LEG---KLH 478
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
Y + +T+ELD LLGD++ I D E + L + + L + ++ A+ LD L+ A
Sbjct: 479 YRSAQTKELDALLGDLHCDIRDQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLAFAS 538
Query: 507 VAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSG 564
A Y RP + + L + IQNGRH L E+ TF+PN D GR+ +ITGPN SG
Sbjct: 539 AARDYGYSRPHYSPQLLGVRIQNGRHPLMELCARTFVPNSAECGGDKGRVKVITGPNSSG 598
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGM 616
KSIY+KQV LI F++ +GSFVPA+ A +G D+ + ++ S+FMIDL+QV
Sbjct: 599 KSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQVAK 658
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGC 675
+ AT QSL L+DEFGKGT T DG+ LL + +++ + P + V T+ L+
Sbjct: 659 AVNNATEQSLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPMCPHIFVTTNFLSLIQLQL 718
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
LP+ +++ TM D D++F Y++ G A S+ H A A +P ++I R
Sbjct: 719 LPQGPLVQYLTM------ETCEDGNDLIFFYQVCEGVANASHASHTAAQARLPDKLIARG 772
Query: 736 AYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLLPS 790
V + +N K ++ Q + + V+K L D+ DL +F Q++LP+
Sbjct: 773 KEVSDLIRNGKPIKPVKELLKEKQMENCQTLVDKFLKLDLEDPNLDLDIFMSQEVLPA 830
>gi|315049971|ref|XP_003174360.1| mismatch repair protein 5 [Arthroderma gypseum CBS 118893]
gi|311342327|gb|EFR01530.1| mismatch repair protein 5 [Arthroderma gypseum CBS 118893]
Length = 991
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 236/812 (29%), Positives = 404/812 (49%), Gaps = 110/812 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE---ESFLSALKR 70
+G SYY + +L+V+E D +IDI+K + +P ++ S +++ E +A
Sbjct: 102 IGCSYYSALEEKLYVMEDIVHGEPD--VIDILKLEIEPTVLLISLRADQVLEDPTNAGNA 159
Query: 71 SDGTTEAPT-------VKLVKSSIFSYEQAWHRLIYLR---------------------- 101
S T++ + + + + F +E A +L L+
Sbjct: 160 SRATSDVDSHLQLPYQLDVRPTQEFGFESAKIKLSSLKLSPEPNTAFRFLIPGTSFSHDG 219
Query: 102 -VTGMDDGLSIKERICYL---NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNA 157
VTG + + E+ YL + ++DM + + V +G +L L+ +R +L +A
Sbjct: 220 DVTG--ETIDFTEQQGYLLNISGVIDMENCISVGCAGAILTYLQRKRATISLRYGSLSSA 277
Query: 158 SITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMN 211
+I I S+ +SL K + ++ +LQI Q++ HP+ + G G+ +KE S++G+ +
Sbjct: 278 AIGIKSLGMISLQKTMLINKDTLASLQILQSESHPNAFNQGPGKTSSGSKEALSIYGLFH 337
Query: 212 K-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIP--- 267
TP G+RLL+ FLRP +D ++ R I+ FL E + L++ +K +K+I
Sbjct: 338 HFARTPQGKRLLKQCFLRPSIDPSTISQRHEFINVFLRPEN-NSPLNQLIKSLKNIKNLR 396
Query: 268 ----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
H+ K ++ S + + F + S L + ++++L+E + D+
Sbjct: 397 PVMIHLRKGISTGS-----AKFRGFKGVVWSSLLDFAFHAIDVNQALQEVTGVQTLDVCS 451
Query: 324 KAASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
KA + +LA ++++ + I+D++ S E+ T+VR G +LD+L++ Y + + L
Sbjct: 452 KA--LLKLDLAQLHQIGSKIHEIVDLSLSIEERR-TVVRPGIDQDLDKLKETYSGMDDLL 508
Query: 381 EEVASLELVQLPH-LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+VA LP + KE+ V VY Q+G+ + + DD + ++ +
Sbjct: 509 NQVAINIATSLPEGINKEINV---VYFPQLGFNIAM---PFDDRGRPMYGSNDEDWTQVF 562
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
R ++ + RE+D LGDIY I + E I L I + L++A + E+D
Sbjct: 563 NTENRAYFKDSRMREMDEKLGDIYGLICEKEIEIVYQLAQDILTYEHMLVEASDICGEID 622
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------D 549
L+L A + +RP +T E ++ I+ GRH+L E TV +F+PN+T I
Sbjct: 623 SLLALVQGASLHKLVRPRMTDENIISIKGGRHMLHEATVSSFVPNNTFIVGGKGAAENTP 682
Query: 550 NDGRIN----------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
+D N ++TGPN+SGKS+Y+ Q A+IV+++HIGSFVPAD+A +G
Sbjct: 683 DDIPSNAEPVPTRGTTQGPSMLLLTGPNFSGKSVYLSQAAIIVYMAHIGSFVPADSALIG 742
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
TD + ++ QS+F DL QV L QAT +SL ++DEFGKGT + DG GL
Sbjct: 743 YTDRILTRVSTRETVSKVQSTFANDLQQVSFALSQATHRSLIIIDEFGKGTESSDGAGLA 802
Query: 646 GGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G Y ++ D PKV+ TH E+ G L L+F M V + +++ VED I+
Sbjct: 803 CGLFEYVLSLGDRRPKVIAATHFHEIFENGFLKPRPELEFGHMEV-QVNSSAQHVEDQII 861
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+LY G + S+G +CA +AG+ +I RA
Sbjct: 862 YLYNFRLGRSSSSFGTNCAAMAGIDPAIISRA 893
>gi|326474267|gb|EGD98276.1| hypothetical protein TESG_05656 [Trichophyton tonsurans CBS 112818]
Length = 989
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 232/808 (28%), Positives = 391/808 (48%), Gaps = 106/808 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
+G SYY + +L+V+E D +IDI+K + +P ++ S ++++ L L +
Sbjct: 104 IGCSYYSAQEEKLYVMEDIVYGGHD--VIDILKLEIEPTVLLLSLRADQG-LEDLTHAGS 160
Query: 74 TTEA-----------------PTVKL------VKSSIFSYEQAWHRLIYLRVTGMD---D 107
T+ A PT + +K S F + + + G D
Sbjct: 161 TSCASSDVDSHLQLPYLLDVRPTQEFGFENAKIKLSAFKFSSESNETFKFLIPGTGFSHD 220
Query: 108 GLSIKERICY---------LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNAS 158
G E + + + ++DM + + V +G ++ L+ +R +L+ +
Sbjct: 221 GNVTGENVDFTEQQGDLLNIGGVIDMENCISVGCAGAIITYLQRKRATLSLQHGSLVAPA 280
Query: 159 ITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK 212
I I ++ +SL K + ++ +LQI Q++ HP+ + G G+ +KEG S++G+ +
Sbjct: 281 IGISAIGMISLQKTMLINRDTLASLQILQSESHPNAFNQGPGKTSSGSKEGLSIYGLFHH 340
Query: 213 -CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIP---- 267
TP G+RLL+ FLRP D + R IS FL E SL + +K +K+I
Sbjct: 341 FARTPQGKRLLKQLFLRPSTDPTVIGQRHEFISVFLRPEN-DPSLQQLIKSLKNIKNMRP 399
Query: 268 ---HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
H+ K ++ S + + F + S L + ++++L+E + ++
Sbjct: 400 VMIHLRKGISTGS-----AKFRGFKGVVWSSLLDFAFHAIDVNQALKE---VTGVQALDA 451
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
+L V + I+D++ S E+ + T+VR +LD L++ Y + L +VA
Sbjct: 452 LLKLDLAQLHQVGAKIHEIVDLSLSVEE-HRTVVRPRIDQDLDNLKETYSGMDSLLNQVA 510
Query: 385 SLELVQLPH-LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK 443
LP + KE+ V VY Q+G+ + + +D + + ++ +
Sbjct: 511 INIAASLPEGITKEINV---VYFPQLGFNIAM---PFNDRGMPMYGSNDEDWTQVFNTEN 564
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
R ++ + RE+D LGDIY I + E I L I ++ L+ A + E+DC L+
Sbjct: 565 RAYFKDSRMREMDEKLGDIYGLICEKEIEIVYKLAQDILIYEKMLVDASDICGEIDCLLA 624
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------DNDGR 553
L A + +RP +T E ++ I++GRH+L E TV +F+PNDT I ND
Sbjct: 625 LVQGASLHKLVRPRMTEENIISIKSGRHMLHEATVSSFVPNDTIIVGGKGSLEDTPNDVP 684
Query: 554 IN----------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD- 596
N ++TGPN+SGKS+Y+ QVA+IV+++HIGSFVPAD+A +G TD
Sbjct: 685 SNTESRPTGDTAQGPSMLLLTGPNFSGKSVYLSQVAIIVYMAHIGSFVPADSAIIGYTDR 744
Query: 597 -------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ ++ QS+F DL QV L QAT++SL ++DEFGKGT + DG GL G
Sbjct: 745 ILTRISTRETVSKVQSTFANDLQQVSFALNQATNRSLIIIDEFGKGTESSDGAGLACGLF 804
Query: 650 NYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYR 707
Y ++ D PKV+ TH E+ G L L+F M V + ++ ++ED + +LY
Sbjct: 805 EYVLSVGDQRPKVIAATHFHEIFENGFLKPRPELEFGHMEV-QVNRSAPNIEDQVTYLYN 863
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRA 735
G + S+G CA +AG+ E+I RA
Sbjct: 864 FQLGRSSSSFGTSCAAMAGIDPEIISRA 891
>gi|407926305|gb|EKG19272.1| hypothetical protein MPH_03135 [Macrophomina phaseolina MS6]
Length = 1355
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 254/817 (31%), Positives = 417/817 (51%), Gaps = 113/817 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK--RS 71
VG SYY + +L+ +E + D +ID +K P I+ STK++++ + L RS
Sbjct: 472 VGCSYYVAREEKLYFMEDAKLGGVD--MIDALKLYVDPTIVLVSTKADDAVMDKLDSDRS 529
Query: 72 ----DGTTEA------PTVKLVKSSI-FSYEQAWHRLIYLRV-TGMDDGLSI-------- 111
+G+ A P + V+ ++ F+YE ++L+ L++ +G ++
Sbjct: 530 FSSVNGSRMARDQFALPYILEVRPTVEFNYESGRNKLVNLKIESGAGPKVAFTVPGDIHT 589
Query: 112 ------------KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI 159
+ER+ L+ +++ S + V +G +LA R L + N
Sbjct: 590 SSGYGGGGDAGSQERLLRLSGWINLDSRITVGCAGAVLAYTHRRRTASFLPGDGAANELF 649
Query: 160 TIDSVIEVSL--NKFLKLDATAHEALQIFQTDKHP-SH-MGIGRA----KEGFSVFGMMN 211
+ +V +L N F+ +D ALQI Q++ HP SH G +A KEG SV+G+ +
Sbjct: 650 RVSTVEMFTLKGNMFINVDTLL--ALQIIQSESHPHSHNQGPTKANSGSKEGLSVYGLFH 707
Query: 212 KCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIP- 267
TP GR LLR +FLRP L+L +N RL+ I+ F + LM L ++LK +K++
Sbjct: 708 YLAKTPQGRHLLRQYFLRPSLELNVINKRLDTIATFTRPDNSHLMDQLVKSLKGIKNMRV 767
Query: 268 ---HILKKFNS-PSFIY--TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
++ K NS P T+ W +L V F+ ++ + R +R F+
Sbjct: 768 SMVNLRKGVNSGPGRKQGITSGLWARIRLFAYHILKVKDAFQE-MNAADRLPIRNQFFE- 825
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
+C LA+V + + +ID ++S E+ + T+V+ G +ELD ++Q Y+ + L
Sbjct: 826 -----TCDYQGLAHVGKRITDVIDFDQS-EQQHRTVVQMGVDEELDNMKQTYDGIEYLLS 879
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL-QGFEF-AFSDMD 439
+VA+ ++P + +++ QIG+L+ + +D T + + +G E + M
Sbjct: 880 QVANDISHRVPAILGASI--NVIFFPQIGFLVTV---PIDPETGQGIWEGSEQDVWERMF 934
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
++ +Y RE+D+ GD++ I D E IT L ++ + + L+ A + AELD
Sbjct: 935 TSDEQAYYKNNNMREMDDRFGDVHGVICDREIEITHTLAQYVLEYEELLIHASDLCAELD 994
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT------------- 546
L+LA A + RP + + ++ I+ GRH LQE+TV +++ NDT
Sbjct: 995 ALLALAQGAKMHKLARPNVVEDNVVQIKAGRHPLQELTVPSYVANDTLLVGPAGIERGIR 1054
Query: 547 ----RIDNDGRIN--------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
I + R N I+TGPNYSGKS+Y+KQ+A+IV+++HIGSFVPA+
Sbjct: 1055 QDSSAIATNERFNAHASSTAMDGPNMLILTGPNYSGKSVYLKQIAVIVYMAHIGSFVPAE 1114
Query: 589 AATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A +GLTD ++ T E QS+FMIDL QV + L AT +SL ++DEFGKGT + D
Sbjct: 1115 SARIGLTDKILTRIATRESVSRIQSAFMIDLQQVCVALNLATPRSLLVIDEFGKGTDSND 1174
Query: 641 GIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDV 699
G GL G + Y + + PKVL TH E+ EG L L+F M V R +++ DV
Sbjct: 1175 GAGLACGILQYLLNRGNRCPKVLAATHFHEIFEEGYLLHHPALQFGHMEV-RVDDSKRDV 1233
Query: 700 ED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+D I +LY G ++ S+G CA + G+ E++ RA
Sbjct: 1234 DDQITYLYNFRLGRSVSSFGSCCAAMNGISREIVARA 1270
>gi|28629053|gb|AAO49456.1|AF487263_4 mismatch repair protein 5 [Leptosphaeria maculans]
Length = 821
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 226/774 (29%), Positives = 377/774 (48%), Gaps = 102/774 (13%)
Query: 43 DIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTV-----------KLVKSSIFSYE 91
D V+ +P +I STK ++S ++ ++ +V ++ S F Y+
Sbjct: 6 DKVRLSIEPTVILVSTKIDDSVINRFDPEGRNDDSASVDNDQFRLPFLLEVRPPSEFYYD 65
Query: 92 QAWHRLIYLRVTGMD---------------------DGLSIKERICYLNSMMDMGSEVQV 130
A +L L++ G + D + ++ L ++D+ S V V
Sbjct: 66 AAKSKLQSLQLEGTEVSQISFNVSSELPAAHQFNDGDTFGQQGQLLRLAGLIDLESRVTV 125
Query: 131 RASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDK 190
+G L++ L+ R L S + ++ SL + ++A +LQI +
Sbjct: 126 GCAGALISYLQRRRAAAYLPGDHSAYLMFRVTTLGMFSLRDTMFINADTLHSLQILDAES 185
Query: 191 HPSHMGIGR------AKEGFSVFGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAI 243
HP G AKEG SV+G+ ++ T GR LLR +FLRP L+++ +N RL+ +
Sbjct: 186 HPHSHNRGPTKSSSGAKEGLSVYGLFHRLARTSQGRTLLRQYFLRPSLNIDMINERLHTV 245
Query: 244 SFFLC--SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
+ +E + L + LK + ++ +L T S + +++ +
Sbjct: 246 GVLVRPENESALQDLGQNLKNIGNMRIVLMNLKKGVSGSTQS-RSGLSRTVWVAIRTFSF 304
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITT-ELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
F + I ++L++ L + I +K + LA + + ID++RS E+ T++
Sbjct: 305 FALKIKDALQDVLGEDHLPIRDKVFENFESYHLAQIGRKLSETIDLDRSAEESR-TVILT 363
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL 420
G +ELD++++ + L L EVA+ +P + ++Y QIG+L+ + +
Sbjct: 364 GVDEELDQMKRTLDGLGSLLNEVAAKLSEMMPSDLRAAL--NVIYFPQIGFLVTV---PI 418
Query: 421 DDTTLEQL--QGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
D TT ++ GFE + M ++++ + +TRE+D+ GD+Y I D E I+ +L
Sbjct: 419 DPTTGSEVYDGGFESQWERMFATEDQVYFKSSETREMDDHFGDVYGIISDREIEISHELA 478
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR--HVLQEM 536
H+ + + + + ELD ++LA A Q RP +T + +L I+ GR H+LQE+
Sbjct: 479 QHVLQYEELITTCSDICGELDSLVALAQGAKQYRLCRPRVTHDNVLQIKGGRESHILQEL 538
Query: 537 TVDTFIPNDT----RIDNDGRIN-------------------IITGPNYSGKSIYIKQVA 573
TV +F+PNDT I D R ++TGPNYSGKS+Y+KQVA
Sbjct: 539 TVSSFVPNDTLLVGGIGRDARSGHDTDIPRLTGSTHELPSMLVLTGPNYSGKSVYLKQVA 598
Query: 574 LIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQS 625
LIVF++H+G FVPAD+A +GLTD S+ T E QS+FMIDL Q+ + L AT +S
Sbjct: 599 LIVFMAHVGCFVPADSADIGLTDKILSRVTTRETVSRAQSAFMIDLQQISLALSLATRRS 658
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHL--TELLNEGCLPKSERL 682
L ++DEFGKGT + DG GL + + ++ PKV+ TH E+ G L L
Sbjct: 659 LLIIDEFGKGTESSDGAGLACAVMEHLLSLGPERPKVIGATHFHEPEIFELGHLDPRPSL 718
Query: 683 KFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
F M V R + ++++V D I +LY +CA + GVP E+I+RA
Sbjct: 719 AFGHMEV-RIDTDASEVNDQITYLY-------------NCADINGVPPEIIQRA 758
>gi|398410117|ref|XP_003856512.1| hypothetical protein MYCGRDRAFT_34912 [Zymoseptoria tritici IPO323]
gi|339476397|gb|EGP91488.1| hypothetical protein MYCGRDRAFT_34912 [Zymoseptoria tritici IPO323]
Length = 865
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 242/780 (31%), Positives = 378/780 (48%), Gaps = 102/780 (13%)
Query: 45 VKYQAQPQIIYTSTKSEESFLSALK------------RSDGTTEAPTVKLVKSSIFSYEQ 92
VK P ++ STK ++ ++ L RSD T ++ ++ F YE
Sbjct: 32 VKLFIDPTVVLVSTKCQDEVMNRLDPEARNPTASVDGRSDQTRLPYLLECRSAAEFGYEA 91
Query: 93 AWHRLIYLRVTGMDDGLSI-----------------------KERICYLNSMMDMGSEVQ 129
A +L+ LR+ G G S+ + ++ L+ ++M S +
Sbjct: 92 ARTKLVNLRI-GQQGGPSVTYVVPGDVVTDDSGDGPEGLGSRQGQLLRLSGWINMESRLT 150
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V +G +L+ ++ R L + +A + +V SL + ++A +LQI T+
Sbjct: 151 VGCAGAVLSYIQRRRATTYLPGDRNSDAMFRVGTVEMFSLRDSMFINADTLLSLQIMSTE 210
Query: 190 KHPSHMGIGRA---------KEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSR 239
HP+ G A KEG SV+G+ ++ TP GR LLR +FLRP +LE L R
Sbjct: 211 AHPNAQQQGPAGKKNSSGGSKEGLSVYGLFHQFAKTPQGRHLLRQYFLRPSTNLEVLTQR 270
Query: 240 LNAISFFLCSE--ELMASLHETLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSIC 293
L+ ++ S+ E++ L ++ VK++ ++ K +S AS A S+
Sbjct: 271 LDTLTVLTRSDNLEVLERLTKSFAGVKNMRTATINLRKGISS-----GASKNRAMSNSVW 325
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI-TTELAYVYELVIGIIDVNRSKEK 352
L + + I +L+E I K A +LA V +L+ ++D + SK +
Sbjct: 326 YSLRLFLFSSLQIGTALQELAGGERLPICLKVAEKFDRRQLAQVGQLINDVVDFDESKIQ 385
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
T++ G D LDE ++ Y L E L +VA Q+ + +V+ QIG+L
Sbjct: 386 KR-TVILTGIDDNLDEAKRTYAGLEEMLSQVAVYIAQQVSSVLVSNVN--VVFFPQIGFL 442
Query: 413 MCIFEEKL---DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
+ + T + +E F+ ET F ++ T ELD GDI+ +ILDM
Sbjct: 443 ISTELGGMAVPSTYTGPEEDPWEKMFAS---ETHTYFKNSNMT-ELDERFGDIHGQILDM 498
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I ++L + F D L + ELD F++LA A ++ RP ++ + ++DI+NG
Sbjct: 499 EIEIVQNLSQRVLEFEDMLNATSDICGELDSFIALARGAIFHSLSRPRISDDNIIDIKNG 558
Query: 530 RHVLQEMTVDTFIPNDTRI-------------------DNDGR------INIITGPNYSG 564
RH LQE+TV F+PNDT I ++D R + ++TGPN+SG
Sbjct: 559 RHPLQELTVSAFVPNDTHIVGGSGQQLQEQLLSDADQSEDDPRQTTGPSVLLMTGPNFSG 618
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGM 616
KS+Y+KQVA+IV+++HIG FVPADAA +GLTD ++ T E QSSFMIDL Q+ +
Sbjct: 619 KSVYLKQVAVIVYMAHIGCFVPADAARIGLTDKILTRIATRESVSRIQSSFMIDLQQISI 678
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGC 675
L AT +SL +LDE GKGT + DG GL+ G + + PKVL TH E+ G
Sbjct: 679 ALNLATRRSLLVLDEAGKGTDSNDGAGLVAGIFEHLLNRGSQCPKVLGATHFHEIFESGF 738
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
L L F M V E++S I +LY G + S+G CA + GV ++++RA
Sbjct: 739 LSPCPGLGFAHMEVHLDEDSSDIDGQITYLYNYRQGRSSSSFGTRCAAMNGVDHQIVQRA 798
>gi|392579947|gb|EIW73074.1| hypothetical protein TREMEDRAFT_26100, partial [Tremella
mesenterica DSM 1558]
Length = 853
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 218/788 (27%), Positives = 387/788 (49%), Gaps = 94/788 (11%)
Query: 11 GHRVGVSYYDSSIRQLHVLEVWEDSNS-DFPLIDIVKYQAQPQIIYTSTKSEESFLSALK 69
G + +Y+D R LH++E +D++S D +++++ Q +P + ++++ +S + ++
Sbjct: 14 GSTLAAAYFDPDSRMLHIMEDTKDTDSWDLACLEVME-QVRPTNVVVTSRTPDSLVDKVE 72
Query: 70 RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTG------------------------- 104
+ + ++ +A + L LR+
Sbjct: 73 QYCDQNPLANYFIDAHKSYTAGRAAYTLSRLRLPDRSQPSQPHFPPSSPTNQESSPIIMG 132
Query: 105 ---MDDGLS-IKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT 160
++G+ ++ I L +++ + + + GL+ LE + I
Sbjct: 133 GRYQEEGMGQVRLAIVKLGCWVNVDAPGAIGVAAGLITYLEKRGNI------LGDGGGIE 186
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFG--MMNKCVTPMG 218
+ + ++ ++ ++ A +L I DK S ++ S+ M N CVTP+G
Sbjct: 187 LSGITALTPQMYMLINHDALTSLNIMGNDKD-SLTLFSQSSPSISIDSQDMFNTCVTPLG 245
Query: 219 RRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSP 276
++LL WFLRP++D++ + R +A+++F +L + + ++ +K++P +
Sbjct: 246 KKLLHTWFLRPLVDMDEIVVRHDAVAYFRTPAGYDLSKEIKKFMRRIKNVPKLCTDIARS 305
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIF---EVGISESLREQLRLLNFDIVEKAASCITTEL 333
S W +S+ S + + I +G S+ E++R+ +++ +++ ++
Sbjct: 306 SGRANFHVWRGIAESLGSAIDIGNIILQRNLGHVHSIFEEVRIR---VIKLSSTKAEPDI 362
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY-----EELPEFLEEVASLE- 387
ID + S EK VR G +ELD ++ + E + L AS+
Sbjct: 363 ---------WIDFDESYEKD-KIAVRPGISEELDICKEQWAGIEWESHAKVLNRQASVAA 412
Query: 388 LVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
L+++P + C + Y Q+G+L+ I L+ +++ G+ F + + E F
Sbjct: 413 LIEIPPNFCNNNIF--VRYFPQLGFLVAIRNRNLN---MDEPPGWRIIFENENEE----F 463
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ TP+ LD+ GDIY +I DME I R+L S + + H+++ +N AELDC ++LA
Sbjct: 464 FKTPQMENLDDHYGDIYCQIGDMEMVIIRELASKVSQSTAHIIEVMNVMAELDCLIALAT 523
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI---DNDG--RINIITGPN 561
A + RP L ++PLL+I GRH++ E V ++ ND+ + +ND + I+TG N
Sbjct: 524 AAVTYDLTRPALAVDPLLEIHEGRHIVHETVVGQYVRNDSLLCGGENDSYHSMMILTGAN 583
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQ 613
SGKS Y KQVALIVF++ IGSFVPA++A +G+ D + ++ S+FMIDL Q
Sbjct: 584 GSGKSAYGKQVALIVFMAQIGSFVPAESAIIGIVDKIYTRVQTRESVSKASSAFMIDLAQ 643
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN 672
V + LR TS+SL LLDEFGKGTL DG GLL G I Y + TC P+ +V TH EL
Sbjct: 644 VSLALRGCTSRSLLLLDEFGKGTLPTDGAGLLAGVIRYLLETCR--PRTIVMTHFHELFA 701
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
+ ++F M V+ + + I ++Y+L P A S CAL+ G+P V+
Sbjct: 702 MDSILVDLPIQFCHMQVVFLD----ETPKIAYMYKLEPSLADTSNAAECALIHGIPQSVV 757
Query: 733 KRAAYVLE 740
RA +V E
Sbjct: 758 DRARFVTE 765
>gi|255936563|ref|XP_002559308.1| Pc13g08830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583928|emb|CAP91952.1| Pc13g08830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 871
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 211/669 (31%), Positives = 337/669 (50%), Gaps = 83/669 (12%)
Query: 108 GLSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
G +++E R+ +++S +DM + V + +G +L L+ R E GN I ++
Sbjct: 181 GFTLQEGRLLHISSSVDMENPVTIGCAGAILTYLQRRRAA-APSPLEEGN-EYRIRALQM 238
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-CVTPMGR 219
+L + + + +LQI Q++ HP+ + G G+ KEG SV+G+ TP GR
Sbjct: 239 FNLRDTMWISSNTFTSLQIIQSESHPNMFNQGPGKKSASGKEGLSVYGLFQHFAYTPQGR 298
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILKKFNSPS 277
L+ F RP ++L+ + R + I F + L A + + LK++K++ ++ N
Sbjct: 299 ARLKQTFFRPSVNLDTIRERHDFIGVFSSPDNLAALDKMTKALKHIKNLRPVM--VNLRK 356
Query: 278 FIYTAS-DWTAFLKSI-CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
I T S T F ++ SLL ++FE +L
Sbjct: 357 GISTGSAKITGFKTTVWASLLAALRVFEAA--------------------------QLYR 390
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
V +V I+D++ S+E+G T+V++G ELD+++ Y+ L L+ VA +P
Sbjct: 391 VGRMVQEIVDIDNSEEQGR-TVVKQGIDRELDKIKDRYDGLNSLLKHVALDIAATIPATL 449
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE-----TKRLFYHTP 450
++Y Q+G+ + I L E+ SD D E R ++
Sbjct: 450 NVDV--NVIYFPQLGFNIAI--------PLNGHGTAEYTGSDDDWELMFITENRAYFKDF 499
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ RE+D LGDIY I + E I DL + + + L+ A + ++D L+L A
Sbjct: 500 RMREMDEKLGDIYGIICEKEIEIVYDLAQRVLRYENVLVDASDICGDIDSLLALTQAASF 559
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT---------------RIDNDGRIN 555
RP + + ++ I+ GRH+LQE+TV +++PNDT D++ +
Sbjct: 560 YKLTRPRMVEQNVIRIKGGRHILQELTVSSYVPNDTFLVGGNESETNDASSSTDSNPSML 619
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSF 607
++TGPNYSGKS+YIKQVALIV+L+ IGSFVPAD+A +G+TD +K T E QS+F
Sbjct: 620 LLTGPNYSGKSVYIKQVALIVYLAQIGSFVPADSAELGVTDKILTKINTQESVSKIQSTF 679
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M DL Q+ + L+Q T++SL ++DEFGKGT DGIGL G ++Y + + P KV+ TH
Sbjct: 680 MNDLQQISLCLKQVTNRSLIIIDEFGKGTNESDGIGLACGILDYLLCLESPAKVIAATHF 739
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAG 726
E+ L RL M V E + +VED I +LY PG + S+G CA + G
Sbjct: 740 HEIFENNFLALRPRLHLGHMEVQVCE-ETQEVEDQITYLYNFRPGRSNKSFGTICAAING 798
Query: 727 VPAEVIKRA 735
+ ++ RA
Sbjct: 799 IDPAIVSRA 807
>gi|317030915|ref|XP_001392463.2| DNA mismatch repair protein Msh5 [Aspergillus niger CBS 513.88]
Length = 928
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 230/791 (29%), Positives = 396/791 (50%), Gaps = 87/791 (10%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLS----ALK 69
VG SYY + +L++L S + +ID + Q +P ++ S + + + L + +
Sbjct: 88 VGCSYYSALEEKLYLLGDLRYSTKE--IIDSLVLQTKPTVLLISPRVDLNNLQERPWSER 145
Query: 70 RSDGTTEAP-TVKLVKSSIFSYEQAWHRLIYLRVT--------------GMDDG------ 108
SD + P +++ S F++ A +RLI L ++ G+ DG
Sbjct: 146 NSDTLSYVPYQLEVRPSQEFNFSNAKNRLIALDLSSRHEHRIKFLVPHSGLVDGEQMDAE 205
Query: 109 ---LSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
L+++E ++ + +DM + V + +G +LA L+ R ++ E + + SV
Sbjct: 206 NLDLTLQEGKLLNVYGSVDMENTVTIGCAGVILAYLQRRRASMSI-SNERALGILRVSSV 264
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-CVTPM 217
+L + ++ +LQI +++ HPS + G GR +KEG SV+G+ + TP
Sbjct: 265 EMFALTGTMFVNGRTLFSLQIMESESHPSMVNHGPGRKSTSSKEGLSVYGLFQRFACTPQ 324
Query: 218 GRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIPHILKKFNS 275
GR L+ FLRP ++L+ +N R + I +L ++ + + LK++K++ +++ N
Sbjct: 325 GRNQLKQMFLRPSVELDVINERNSFIGVYLRTDNFNPFDKMVKGLKHIKNLHYVM--INL 382
Query: 276 PSFIYTAS-DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELA 334
I T S F ++ + L + + I ++LRE N + KA E A
Sbjct: 383 RKGISTGSGKIMGFKATVWATLLAFSFYGIDIYDALRETSGGTNLALHSKALRAF--EAA 440
Query: 335 YVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL 394
+Y+ +D++ S+E+G T+V+ G +LD ++ Y+ L L++VA +E+
Sbjct: 441 QLYK-----VDIDSSEEQGR-TVVKPGIDRDLDRIKDRYDGLNSLLKQVA-IEIATTIPE 493
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
++ V +VY Q+G+ + I L++ +G E + M R + + RE
Sbjct: 494 SYDIDV-NVVYFPQLGFNIAI---PLNNARDAAYRGAENEWELMFFTENRAYLKDFRMRE 549
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
+D+ LGDIY I + E I DL + + + LL+A + ++D L++A A +
Sbjct: 550 MDDKLGDIYGIICEREIEIVYDLAQRVLQYEEVLLEASDICGQIDSLLAMAHAASSYKLV 609
Query: 515 RPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------------------DNDG 552
RP + E ++ I+ GRH+LQE+TV +++PNDT + D +
Sbjct: 610 RPKMVQEDVIKIKGGRHILQELTVSSYVPNDTYLIGRRTQRESVEPICTTLKPYENDCEP 669
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS---KHMTAE-----Q 604
+ ++TGPNYSGKS+Y+KQVALI++L+ +GSFVPA++A +G+ D K T + Q
Sbjct: 670 SMLLLTGPNYSGKSVYMKQVALIIYLAQVGSFVPAESAELGIIDKILVKSNTQDSVSQIQ 729
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM DL Q+ L+Q T SL L+DEFGKGT DGIGL G + + + PKV+
Sbjct: 730 STFMNDLQQLSFDLKQVTGHSLLLIDEFGKGTNEYDGIGLACGVLENLLNREDAPKVIAA 789
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH E+L G L +L+ M V E + I +LY G + S+G CA +
Sbjct: 790 THFHEILANGYLKPRPQLQLGHMEVRVHEEPGEAEDQITYLYNFRLGRSDQSFGTICAAM 849
Query: 725 AGVPAEVIKRA 735
G+ ++ RA
Sbjct: 850 NGISQTIVDRA 860
>gi|452987851|gb|EME87606.1| hypothetical protein MYCFIDRAFT_201191 [Pseudocercospora fijiensis
CIRAD86]
Length = 954
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 236/778 (30%), Positives = 368/778 (47%), Gaps = 109/778 (14%)
Query: 51 PQIIYTSTKSEESFLSAL-----------KRSDGTTEAPTVKLV----KSSIFSYEQAWH 95
P +I TSTK +S L +DG ++ ++ + ++ F Y+ A +
Sbjct: 122 PTVILTSTKCNAETISRLDPEMRDAHLRAASADGPSDQSSLPYLLECRPNAEFGYDSARN 181
Query: 96 RLIYLRVTGMDDGLSI-------------------------KERICYLNSMMDMGSEVQV 130
+L+ LR+ G G S+ + + L+ ++M S V
Sbjct: 182 KLVNLRI-GQSGGPSVTFTVPGDVMTQHDDRQSSDNGFHGGQASLLRLSGWVNMESRFTV 240
Query: 131 RASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDK 190
+G +LA L+ R L + + V SL + ++A +LQI T+
Sbjct: 241 GCAGAVLAYLQRRRATTYLPGDRDAESMFRVARVEMFSLKDSMFVNADTLLSLQITTTES 300
Query: 191 HPSHMGIGRAK-----EGFSVFGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
HP+ G AK EG SV+G+ + T GR LR FLRP +++E +N R N +S
Sbjct: 301 HPNAQQQGPAKSGGSKEGLSVYGLFHPLAKTQQGRHTLRQIFLRPSMNMEIINERHNTLS 360
Query: 245 FFLCSEE--LMASLHETLKYVKDIPHI---LKKFNSPS-----FIYTASDWTAFLKSI-C 293
FL E ++ L +TLK VK++ + L+K NS AS W + + C
Sbjct: 361 LFLQPENDNVLDRLSKTLKGVKNMRIVTTNLRKGNSSGPDNRGKAIPASAWYSLHGFLYC 420
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L ++ + ++ + L L+ + EK +A V + + +ID SK +
Sbjct: 421 CLSILDALADMPGATHL-----ALHHKVEEKFDR---QRIAEVGQYIAEVIDFEGSKVEK 472
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
T++ G ELDELR+ + + + L EVA + +P + +++ QIG+L+
Sbjct: 473 R-TVIMPGVSAELDELRRSWAGIDDMLSEVAVVIANLVPTDIRSQL--NVIFFPQIGFLI 529
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
I E DD + + + M T +Y E+D GDI+ +I+D+E I
Sbjct: 530 SICHEA-DDVPVPYAGTDDDPWEKMFHSTDASYYKNAHMTEMDEQFGDIHGQIIDLEIEI 588
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+ L + + D ++ E+D ++L A N +RP + + ++ I+ GRH+L
Sbjct: 589 VQMLAQRVLEYEDLIVSCSEVCGEVDALVALTQGAKLYNLVRPQMIDDNIIKIKEGRHIL 648
Query: 534 QEMTVDTFIPNDTRI--------------DNDGRIN--------IITGPNYSGKSIYIKQ 571
QE+TV TF+PNDT + D R I+TGPNYSGKSIY+KQ
Sbjct: 649 QELTVPTFVPNDTCLVGGNGDEQESSPHRSRDPRTQPLQGPNMIILTGPNYSGKSIYLKQ 708
Query: 572 VALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATS 623
VA+IVF++HIGSFVPA +A +GLTD ++ T E QS+FMIDL Q + L AT
Sbjct: 709 VAIIVFMAHIGSFVPASSAKIGLTDKILTRIATRESVSRIQSAFMIDLQQASIALNLATR 768
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCL-PK 678
+SL ++DEFGKGT + DG GL G + + C PKVL TH E+ G L P+
Sbjct: 769 RSLVIIDEFGKGTDSNDGAGLAAGVFEHLLQRSPNC---PKVLGATHFHEIFESGFLSPR 825
Query: 679 SE-RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
L F M + + + + I FLY L G + S+G CA + G+ EV++RA
Sbjct: 826 PGLGLAFAHMEIQLDSSENRRGKQITFLYNLRSGRSTQSFGTACAAMNGIDREVVERA 883
>gi|212542597|ref|XP_002151453.1| DNA mismatch repair protein Msh5, putative [Talaromyces marneffei
ATCC 18224]
gi|210066360|gb|EEA20453.1| DNA mismatch repair protein Msh5, putative [Talaromyces marneffei
ATCC 18224]
Length = 930
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 224/797 (28%), Positives = 382/797 (47%), Gaps = 95/797 (11%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKR--- 70
VG +Y + +L +L + DF ID +K + P I TST++EE+ ++ +++
Sbjct: 88 VGCCFYIAREERLSILSDVQFGGKDF--IDTLKVEINPTTILTSTRAEEATMNDIRQFAL 145
Query: 71 ---------------SDGTTEAPTVKLVKSSIFSYEQAWHRLIYL---------RVTGMD 106
+ + + KL + IF E+ + + V +
Sbjct: 146 DNALRLPYRIDVRPIQEYSVDGAKAKLAELEIFQQEEDLAQFLVPGDGLTQQAEEVIAEN 205
Query: 107 DGLSI-KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVI 165
G S K ++ L ++D+ + V + +G +LA ++ R E+ A+ + SV
Sbjct: 206 AGFSFEKGKLLRLGGIVDIENSVSLGCTGAVLAYVQ--RRSTEHNSLENSIATYAVRSVE 263
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIG------RAKEGFSVFGMMNK-CVTPMG 218
L + ++ +LQI QT+ HP+ G RAKE S++G+ ++ +TP G
Sbjct: 264 TFFLKGTMHVNLNTLSSLQIMQTESHPNSFNQGPRKTSSRAKEDLSLYGLFHQHLLTPQG 323
Query: 219 RRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMASLHETLKYVKDIPHIL----KK 272
+ LR +FLRP +DL+ ++ R + L ++ + + LK VK++ ++ K
Sbjct: 324 KSRLRQYFLRPSVDLDVISKRHKILDLLLLPANKSTLQKMCSCLKKVKNMCPVMTTLHKG 383
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNK-IFEVGISE--SLREQLRLLNFDIVEKAASCI 329
+S + + W + L L + + + E+G + S RE++ L D+
Sbjct: 384 LSSAFGGFKGTIWGSLLNFATHTLDLQEAVREMGCQDMVSFRERM-LETLDV-------- 434
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
L V L+ ID+ S+E+ T++++G +LD L+ Y L L++VA
Sbjct: 435 -GSLHAVGRLIYQTIDIEDSQEQQR-TVIKQGVDRDLDLLKTRYNGLDGLLKQVAIDVAS 492
Query: 390 QLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+P +L E+ V +Y Q+G+ + I D T G + + R ++
Sbjct: 493 TIPANLQIEVNV---IYFPQLGFNIAI---PFDTTGRAAYTGSGGTWEQVFTTENRAYFK 546
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
+ RELD LGDIY + + E I ++ ++ + L ELDC+L++A A
Sbjct: 547 DERMRELDEKLGDIYSLVCEREIEIAHEIAQNVLKYEKVLSACSELCGELDCYLAMAKTA 606
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-------------------- 548
+ RP ++ E ++ ++ GRH LQE+ V ++IPND +
Sbjct: 607 EAYKFARPQMSTENVIRVEGGRHPLQELMVASYIPNDVNLQGGCGTQQPGTAIHFADRQY 666
Query: 549 DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-- 603
N + ++TGPN+SGKS+Y+KQVALIV+L+HIGS+VPA A +G+TD ++ T E
Sbjct: 667 SNTPSMLLLTGPNFSGKSVYMKQVALIVYLAHIGSYVPALNAEIGITDKILTRISTPETV 726
Query: 604 ---QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-P 659
QS+F +DL Q+ ++L+ +T +SL ++DEFGKGT DG GL G Y ++ P
Sbjct: 727 SKIQSTFTLDLQQISLLLKFSTRRSLIIIDEFGKGTDLNDGAGLACGIFEYLLSLGGERP 786
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
KVL TH E+ LP+ L F M V E + E++ +LY PG + S+G
Sbjct: 787 KVLAATHFHEIFENRFLPERPSLGFGHMEVRVDEEIANAKEEVAYLYNFKPGRSNQSFGT 846
Query: 720 HCALLAGVPAEVIKRAA 736
CA + GV ++ RA+
Sbjct: 847 LCAAMNGVGEAIVARAS 863
>gi|426195802|gb|EKV45731.1| hypothetical protein AGABI2DRAFT_186443 [Agaricus bisporus var.
bisporus H97]
Length = 892
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 241/832 (28%), Positives = 398/832 (47%), Gaps = 145/832 (17%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNS-DFPLIDIVKYQAQPQIIYTSTKSEESFLSAL 68
HG RVG +Y+ + L++LE ++S+ DF ++ + Q P ++ TS+KS+E+F+ +
Sbjct: 42 HG-RVGAAYFHPTSCVLYLLEDTQESHHYDFTVL--LLEQTSPDVVLTSSKSDENFIDTI 98
Query: 69 KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLR---------------VTGMDDGLS--- 110
+ TT A ++ F+ + RL+YL +G G+S
Sbjct: 99 RDHLDTTNA-IFQIRPYKEFNPTRGKDRLLYLNRLADLPVDENIALQTTSGSVGGVSHNA 157
Query: 111 ------------------------IKERICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
+ C NS + M S +G L+ L E+ +
Sbjct: 158 YDFMSRRREETGDPTMKHWNASIRLSNFSCAENSPLCMSS------AGALIDHLVREQAL 211
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
L + G + I + ++LN+ + ++ A +LQ+F+ + H S + + KEG S+
Sbjct: 212 SDL--NDEGIQGLVIREIEVLTLNEIMHINMDALLSLQVFENESHAS-VHSSKFKEGLSL 268
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS--LHETLKYVK 264
+G +N T +GR LL +W +RP + + R A++ F E L + +H LK VK
Sbjct: 269 YGTLNYTKTTLGRSLLYSWLMRPSCSISVIKLRHEAVACFSRPENLTPTGVMHGHLKGVK 328
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
++P +L S +DW K S ++ + I E+ +++ R+L
Sbjct: 329 NVPRMLAVMRSGKI--KLADWQGLAKLSFHIVMLCDTITELHGGDAIDVLQRILT----- 381
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYG--TLVREGFCDELDELRQIYEELPEFLE 381
++ + E+ + + +V +E VR G +ELD + +Y + L
Sbjct: 382 ------AADIQILKEIGVRVNEVIDWEESTLAERVCVRPGIDEELDNKKHVYHGIDSILS 435
Query: 382 EVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCI-----FEEKL----DDTTLEQLQGF 431
VA +P +L + V VY Q+GYL+CI +EE L D+ TL+
Sbjct: 436 NVAHQISRNVPRNLAMSLNV---VYFPQLGYLICIPISQGWEEGLAPVPDNWTLQ----- 487
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
FS + +++ + + ++DN +GD++ I+D E I ++L+ + + +
Sbjct: 488 ---FS-----SDHVYFKSSEMHDMDNHIGDLHSAIVDREIEIIQELLEEVLVHDKMIGDV 539
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--- 548
+ AELDC LS A + NY +P + + +++I GRH LQE VD F+PNDT+I
Sbjct: 540 CDICAELDCLLSFAEASRNYNYKQPEMVEDNVIEIVGGRHPLQEQVVDVFVPNDTKIAGG 599
Query: 549 --------DNDGRI----NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
+ DG+I + TG N GKS+++KQVALI ++ IG FVPAD A +GL D
Sbjct: 600 AGIGSPLRNEDGKILNSVMLCTGANACGKSVFLKQVALIQIMAQIGCFVPADYARLGLVD 659
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ ++ QS+FMIDL+QV + LR T +SL LLDEFGKGTL+ DG G+ G
Sbjct: 660 KIFTRVSTRESVSKVQSAFMIDLNQVSLSLRNCTKRSLILLDEFGKGTLSTDGAGIFCGV 719
Query: 649 INYFVTCDVP-PKVLVCTHLTELLNEGCL-PKSERLKFYTMSVL---------------- 690
+ + + PKVLV TH ++ NE L P + + F M V+
Sbjct: 720 LKHLLNRGAECPKVLVATHFHDVFNEQLLNPHNMPITFCHMQVIFCVTDESISEGDESTA 779
Query: 691 -RPENN---STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
P+ N ++ E+I +LY++ G +L S+ CALL GVP V++RA +V
Sbjct: 780 SFPQLNGIKASTGENITYLYKVTEGLSLDSHAGKCALLCGVPTRVVQRARHV 831
>gi|342884518|gb|EGU84728.1| hypothetical protein FOXB_04739 [Fusarium oxysporum Fo5176]
Length = 914
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 236/796 (29%), Positives = 376/796 (47%), Gaps = 133/796 (16%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFP---LIDIVKYQAQPQIIYTSTKSEESFLSALKR 70
+G +Y+ ++ LHV E ++ D LI I QP + S ++ SF L++
Sbjct: 105 IGCAYFSTTDGILHVSEDIATASLDIAEQFLIHI-----QPTSLLVSARASASFRDHLEK 159
Query: 71 ---SDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRV-----------TGMDD--------G 108
S+G ++ + ++SS FS E A RL+ L TG+++ G
Sbjct: 160 ITASEGASKGVIFRGLQSSEFSIETAHERLVNLDSQALSATGIVFSTGIEEDGSEESIPG 219
Query: 109 LSIKE----RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
LS E R ++M S+V V +G LL + R L + + +
Sbjct: 220 LSQSESQAFRQLRYGGCINMNSQVSVGCAGALLGDILRRRSAGFLPDGQVAGVLFRVVDI 279
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIG------RAKEGFSVFGMMNK-CVTPM 217
SLN ++ + A +LQI QT+ HP+ G +KE SV+G+ + TP
Sbjct: 280 RMFSLNTYMYVSTDALLSLQILQTELHPNSQAWGPDANKSNSKESLSVYGLFHHLACTPQ 339
Query: 218 GRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK--- 272
GR LR FLRP+LDL+ ++ R I+ L + + +A L TL+ ++++ L +
Sbjct: 340 GRAQLRQLFLRPLLDLDIISERQRTITVLLQPDNADKLAQLTSTLRKIRNMRTTLAQLRK 399
Query: 273 ---FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAAS 327
F S + W K L +LR+ + L N DIV
Sbjct: 400 GIEFPSAGHSFDRGVWATIQKFTAQAL------------TLRDTIGLFNGGSDIV----- 442
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I ++++ + + VR G +LDEL++ Y+ + FL EV +
Sbjct: 443 ---------------IFKKSKARHR---SSVRTGIDPQLDELKRRYDGMDSFLTEVVNQL 484
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF- 446
+LP ++ CI ++ QIG+L + +L T Q +G A G ++LF
Sbjct: 485 NRELPQWARKHVRSCI-FLPQIGFLTVVESNRL--TGNGQYEGEGTAV----GAWEKLFT 537
Query: 447 ------YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y RELD GD+Y +I + + LL A + E D
Sbjct: 538 ADGAVCYKNSYMRELDEEYGDMYCQI-----------GGKVLEHEEPLLLASDMCGEFDA 586
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-----------D 549
L+LAL A + ++ P + ++ I+ GRH LQE+ V FIPN + D
Sbjct: 587 ILALALCAEKYDWHAPQMVEASIIHIEEGRHPLQELVVPAFIPNPCHLFTGTSNITAVQD 646
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMT 601
+ ++TGPN+SGKS+Y+KQ A+IV+L+HIGSFVPA AT+GLT+S + M+
Sbjct: 647 GSPQALVLTGPNHSGKSVYLKQTAIIVYLAHIGSFVPAVQATIGLTESILTCISPRESMS 706
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PK 660
+SSF D+ Q + ++ +T +SL L+DEFGKGT +DG GL+ ++Y+++ P+
Sbjct: 707 GGESSFARDMKQAALSMKSSTPRSLVLVDEFGKGTNGDDGAGLIAALLDYYLSLGPECPR 766
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGL 719
+L TH E+ G L L+ M+V R + N++ V+D + FL+ L GH+ S+G
Sbjct: 767 LLAATHFHEVFECGYLENHNGLRIAHMNV-RMDWNASLVDDQVTFLFNLEYGHSTSSFGG 825
Query: 720 HCALLAGVPAEVIKRA 735
CA L GVP+ V++RA
Sbjct: 826 RCAALNGVPSAVVERA 841
>gi|332026750|gb|EGI66859.1| MutS protein-like protein 5 [Acromyrmex echinatior]
Length = 797
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 229/806 (28%), Positives = 387/806 (48%), Gaps = 76/806 (9%)
Query: 8 ILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSA 67
I +++G +YY+ +L V++ D F + + Q QP+ + T + + + FL+A
Sbjct: 2 IWSNNQLGAAYYNILTSELFVMDDTYDDGVHFNIAKTLYKQCQPRYVITISGTSDEFLTA 61
Query: 68 LK---------------RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIK 112
++ ++++++ +++ +HR+ L++ +
Sbjct: 62 IEALVMSEMSSDRSRSSGLSSGPSQVSLRVMRKREHGFDRCYHRVRCLKLRSEPVNANNV 121
Query: 113 ERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKF 172
ER+ +L +++ S V + A G LL ++ + SG S+ V+L
Sbjct: 122 ERLIFLQGLLNFKSIVMIHALGLLLIYIDQHW--SNIALDPSGRPGFV--SLSSVTLRDI 177
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRA---KEGFSVFGMMNKCVTPMGRRLLRNWFL-- 227
+ +D +EAL I HPS G A K+ S+F ++N+C + G + L + L
Sbjct: 178 VMIDDDTYEALNIVHARHHPSLFKCGDAAAKKQSGSLFILLNRCQSRPGAQFLWHVILSK 237
Query: 228 ---RPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPH-ILKKFNSPSFIYT 281
PI ++E LN R I F L + ++ +L LK+V + + IL ++ +
Sbjct: 238 TLRHPIRNIEILNERFEVIDFCLNPDNHSIVENLTSCLKHVYRLTNVILDRYLAQQ--AK 295
Query: 282 ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVI 341
SDW K++ S++++ I E +++RL + K S IT E+ Y+ +
Sbjct: 296 VSDWRRLHKTVSSIIYI-----ADICEKHCKKVRLFH-----KIVSSITNEVRYIKYFIE 345
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
I+D +K + +VR LD L + LPE L ++ ++ + +L +
Sbjct: 346 YIVDFG-AKRSEHDFIVRSNVDSHLDNLHHVRSTLPETLTQMVEKDMKE--YLPASVTTC 402
Query: 402 CIVYIHQIGYLMCIF---EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
+VYI IGYL+ I +D+ LE L+ F+F +++ +Y +P +ELD
Sbjct: 403 KMVYIPNIGYLLAITGWSPSPVDNVDLENLE-FKFVSNNIR------YYKSPTAKELDET 455
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+GDI +I E I LV +I + + A+ AELD L+ ++A + NY+RP +
Sbjct: 456 IGDILLRINKRESYIMLKLVKYINKHAASIFNAIQLCAELDTLLAFYVIAREYNYVRPNV 515
Query: 519 TLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVF 577
++ I+ GRH LQE + TF+PNDT D + I+TGPN SGKS Y+KQVALIVF
Sbjct: 516 VNRQIIAIEQGRHPLQEF-LTTFVPNDTYSGDEKSLVKILTGPNASGKSTYLKQVALIVF 574
Query: 578 LSHIGSFVPADAATVGL--------TDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++HIG FVPA +AT+GL T + S F+ D+ Q+ L +T S+ +L
Sbjct: 575 MAHIGCFVPAKSATIGLVTHILTQITSVDSIALNTSMFLQDMRQINSALYASTPNSIVIL 634
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DEFG GT G+ LL +N FV P + V TH+ ++N LP+S ++ T
Sbjct: 635 DEFGNGTSEVSGLSLLAAVLNNFVERATDCPHIFVATHMHRVMN--MLPQSSIIEQQTFE 692
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E+ S + +LY L G+ S+ A AG+ ++IKRA V E + +
Sbjct: 693 FITNEDGS-----VAYLYSLTRGYVARSFAHAAARSAGLDEKIIKRALEVYEKFKVGELP 747
Query: 749 ERWSHENISAQDQQYKNAVEKMLAFD 774
R S N QD + +E++L D
Sbjct: 748 SRLSEAN--GQDMAV-DIIERLLKAD 770
>gi|336272375|ref|XP_003350944.1| MSH5 protein [Sordaria macrospora k-hell]
gi|380090711|emb|CCC04881.1| putative MSH5 protein [Sordaria macrospora k-hell]
Length = 923
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 256/854 (29%), Positives = 402/854 (47%), Gaps = 118/854 (13%)
Query: 2 QVYMACILH-GHRVGVSYYDSSIRQLHVLEVWED-SNSDFPLIDIVKYQAQPQIIYTSTK 59
+V MA ++ +VG +YY + L + ED S + + QAQP I +
Sbjct: 50 EVIMAVDMNRDGKVGCAYY---VVLDETLVIEEDVSMGGIETVATLVLQAQPTTIMVPNR 106
Query: 60 SEESFLSALKRS------DGTTEAPTVKLVK---SSIFSYEQAWHRLIYL---------R 101
+ + L++ D TE + +++ S+ F Y+ L+ L
Sbjct: 107 APQKLTEFLEKDAQKLDEDDATEIRGLYILRHLVSAEFDYDANKEALLGLYNDACSGDGM 166
Query: 102 VTGMDD-------GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKES 154
G +D G S R+ L +++GS + + +G +L+ LE R + L
Sbjct: 167 SPGAEDEDAMHCIGGSSHRRLMRLEKTVNLGSHLSIGCAGAVLSDLERRRSTEYLAPGAE 226
Query: 155 GNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHM------GIGRAKEGFSVFG 208
S + ++ S + + + A A +LQI +T+ HP+ + KE S+ G
Sbjct: 227 APISFRVKAITMSSQSDVMLISADALLSLQIMRTELHPNPQLQCLGGSENKVKESLSISG 286
Query: 209 MMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKD 265
++ T G+ LR +P LD + + R +I+ FL E +++AS+ LK VK+
Sbjct: 287 LLQALAGTVQGKARLRQMLFQPSLDADVIEERQTSIAVFLRPENSDIVASIRRQLKKVKN 346
Query: 266 IPHILKKFNSP------SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL-- 317
I L +DW A L+ I+ LRE +R L
Sbjct: 347 IKAALHHVRGGVDRIRGQLSLRINDWRALLRFTM------------IATQLREDIRSLAG 394
Query: 318 --NFDIVEKAASCITTE-LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR---- 370
+ I K I T+ + E+++ ID S++ G T + G + LDEL+
Sbjct: 395 GQDLSIYAKLQDDIDTQAILQAGEMIVNTIDFKLSQDTGR-TEILPGASERLDELKDDYT 453
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
Q+++EL + EV L Q+P + C + + ++G+L+ + DT G
Sbjct: 454 QVFQELSDIKREV----LAQVPRWAVQYVQECTI-VPRLGFLIAVTLNP--DTGEGAFNG 506
Query: 431 FEFA---FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
A + + + +R +Y ELD + GD+ +I D E + L + + +
Sbjct: 507 RGVADDEWHQVVTDHQRAYYKNKTMVELDGIYGDLTAEIADEEIEVVIKLAAAVFEHENA 566
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTR 547
L++A ELD L+LAL A + N+ RP +T E +LDI+ GRH LQE+ V +FIPND
Sbjct: 567 LIRASEILGELDSLLALALAAEKFNWARPKMTSENVLDIEGGRHPLQELLVPSFIPNDCF 626
Query: 548 I-------DND-------------GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
+ DND + I+TGPN SGKSIY+KQVALIV+L+HIGS+VP
Sbjct: 627 LKGGRGSEDNDEVDIAGVECEPKESSVLILTGPNSSGKSIYMKQVALIVYLAHIGSYVPV 686
Query: 588 DAATVGLTD------SKHMTA--EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
AT+G+TD + TA ++S+FM DL Q AT QSL L DEFGKGT +
Sbjct: 687 TRATIGITDRIFTRVATRETAMDDESAFMTDLKQAAFSTNFATRQSLVLADEFGKGTSMD 746
Query: 640 DGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSV-LRPENNST 697
G +LG I +F+ P+VL TH ++ +G L E + + M V L PE +
Sbjct: 747 AGAAILGAYIYHFLEMGADRPRVLASTHFHDVFKKGFLKPEEGVAYAHMEVRLDPE--AK 804
Query: 698 DVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE----RWS 752
DVED I +LYRLVPG + S GL CA + G+ V+KRA +L+ + +K ++ + S
Sbjct: 805 DVEDRITYLYRLVPGRSEHSLGLMCAAINGIEDRVLKRAQEILDMLEGDKDIDEVFSKPS 864
Query: 753 HENISAQDQQYKNA 766
E+I ++ KNA
Sbjct: 865 DEDI----KELKNA 874
>gi|409078893|gb|EKM79255.1| hypothetical protein AGABI1DRAFT_120680 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 917
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 240/832 (28%), Positives = 395/832 (47%), Gaps = 145/832 (17%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNS-DFPLIDIVKYQAQPQIIYTSTKSEESFLSAL 68
HG RVG +Y+ + L++LE ++S+ DF ++ + Q P ++ TS+KS+E+F+ +
Sbjct: 67 HG-RVGAAYFHPTSCVLYLLEDTQESHHYDFTVL--LLEQTSPDVVLTSSKSDENFIDTI 123
Query: 69 KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLR---------------VTGMDDGLS--- 110
+ TT A ++ F+ + RL+YL +G G+S
Sbjct: 124 RDHLDTTNA-IFQIRPYKEFNPTRGKDRLLYLNRLADLPVDENIALQTTSGSVGGVSHNA 182
Query: 111 ------------------------IKERICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
+ C NS + M S +G L+ L E+ +
Sbjct: 183 YDFMSRRREETGDPTMKHWNASIRLSNFSCAENSPLCMSS------AGALIDHLVREQAL 236
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
L + G + I + ++LN+ + ++ A +LQ+F+ + H S + + KEG S+
Sbjct: 237 SDL--NDEGIRGLVIREIEVLTLNEIMHINMDALLSLQVFENESHAS-VHSSKFKEGLSL 293
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS--LHETLKYVK 264
+G +N T +GR LL +W +RP + + R A++ F E L + +H LK VK
Sbjct: 294 YGTLNYTKTTLGRSLLYSWLMRPSCSISVIKLRHEAVACFSRPENLTPTGVMHGHLKGVK 353
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
++P +L S +DW K S ++ + I E+ +++ R+L
Sbjct: 354 NVPRMLAVMRSGKI--KLADWQGLAKLSFHIVMLCDTITELHGGDAIDVLQRILT----- 406
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYG--TLVREGFCDELDELRQIYEELPEFLE 381
++ + E+ + + +V +E VR G +ELD + +Y + L
Sbjct: 407 ------AADIQILKEIGVRVNEVIDWEESTLAERVCVRPGIDEELDNKKHVYHGIDSILS 460
Query: 382 EVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCI-----FEEKL----DDTTLEQLQGF 431
VA +P +L + V VY Q+GYL+CI +EE L D+ TL+
Sbjct: 461 NVAHQISRNVPRNLAMSLNV---VYFPQLGYLICIPISQGWEEGLAPVPDNWTLQ----- 512
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
FS + +++ + + ++DN +GD++ I+D E I ++L+ + + +
Sbjct: 513 ---FS-----SDHVYFKSSEMHDMDNHIGDLHSAIVDREIEIIQELLEEVLVHDQMIGDV 564
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--- 548
+ AELDC LS A + NY +P + + +++I GRH LQE VD F+PND +I
Sbjct: 565 CDICAELDCLLSFAEASRNYNYKQPEMVEDNVIEIVGGRHPLQEQVVDVFVPNDIKIAGG 624
Query: 549 --------DNDGRI----NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
+ DG+I + TG N GKS+++KQVALI ++ IG FVPAD A +GL D
Sbjct: 625 AGIGSPLRNEDGKILNSVMLCTGANACGKSVFLKQVALIQIMAQIGCFVPADYARLGLVD 684
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ ++ QS+FMIDL+QV + LR T +SL LLDEFGKGTL+ DG G+ G
Sbjct: 685 KIFTRVSTRESVSKVQSAFMIDLNQVSLSLRNCTKRSLILLDEFGKGTLSTDGAGIFCGV 744
Query: 649 INYFVTCDVP-PKVLVCTHLTELLNEGCL-PKSERLKFYTMSV--------LRPENNSTD 698
+ + + PKVLV TH ++ NE L P + + F M V + + ST
Sbjct: 745 LKHLLNRGAECPKVLVATHFHDVFNEQLLNPHNTPITFCHMQVIFCVTDESISEGDESTA 804
Query: 699 V------------EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
E+I +LY++ G +L S+ CALL GVP V++RA +V
Sbjct: 805 SFPLLNGIKASTGENITYLYKVTEGLSLDSHAGKCALLCGVPTRVVQRARHV 856
>gi|307167669|gb|EFN61172.1| MutS protein-like protein 5 [Camponotus floridanus]
Length = 2173
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 224/774 (28%), Positives = 380/774 (49%), Gaps = 76/774 (9%)
Query: 8 ILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSA 67
I +++G +YY+ +L V++ D N F + + Q QP+ + T + + + FL+A
Sbjct: 1423 IWSSNQLGAAYYNILTSELFVMDDTYDDNIHFNITKTLYKQCQPRYVVTISGTSDEFLAA 1482
Query: 68 LK------------RSDGTTEAP----TVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSI 111
L+ RS GT+ A ++++++ + + + +HR+ L++ +
Sbjct: 1483 LETLITSETSSELNRSPGTSSAGLTQVSLRVMRKREYGFNRCYHRVRCLKLESEPANANN 1542
Query: 112 KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNK 171
ER+ +L +++ S V + G LL ++ L+ SG S S+ ++L
Sbjct: 1543 VERLIFLQGLLNFKSIVMIHTLGLLLIYIDQHWSNIALD--PSGRPSFV--SLTSITLRD 1598
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRA---KEGFSVFGMMNKCVTPMGRRLLRNWFL- 227
+ ++ +EAL I HPS G A K+ S+F ++++C + G + L F+
Sbjct: 1599 IVMINDDTYEALNIVHARHHPSLFKCGDAASKKQSGSLFILLSRCQSRPGAQYLWQVFMA 1658
Query: 228 ------RPILDLENLNSRLNAISFFLC--SEELMASLHETLKYVKDIPH-ILKKFNSPSF 278
P ++E LN R + F L ++ ++ +L LK++ + + IL ++ +
Sbjct: 1659 TLRTLRHPTRNIEILNQRFEVVEFCLNPDNQSIVENLMSCLKHIYRLTNVILDRYLAQQA 1718
Query: 279 IYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE 338
SDW K+I S++++ I E E+++L K IT E+ YV
Sbjct: 1719 --KVSDWRRLHKTISSIIYI-----ADICEKRHEKVKLF-----RKIVDSITNEVRYVKY 1766
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
+ I+D + SK+ +VR LD+L I L E L + ++ +L +
Sbjct: 1767 FIEYIVDFS-SKKSENDFIVRTNVDSHLDKLHHIRGTLSETLTRMGEKDMKD--YLPPSV 1823
Query: 399 FVPCIVYIHQIGYLMCIF---EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+VYI IGYL+ I D+ LE L+ F+F +++ +Y +P +EL
Sbjct: 1824 TTCKMVYIPNIGYLLAITGWNPSPADNADLENLE-FKFVSNNI------RYYKSPSAKEL 1876
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
DN +GDI +I E I LV +I + + A+ AELD L+ +VA + NY++
Sbjct: 1877 DNTVGDILLRINKRESYIILKLVKYINKHAASIFNAIQLCAELDTLLAFYVVAREYNYIK 1936
Query: 516 PILTLEPLLDIQNGRHVLQEMTVDTFIPNDT-RIDNDGRINIITGPNYSGKSIYIKQVAL 574
P + ++ ++ GRH LQE + TF+PNDT D RI I+TGPN SGKS Y+KQ+AL
Sbjct: 1937 PNMVERQIIAVEQGRHPLQEF-LTTFVPNDTYSGDEKSRIKILTGPNASGKSTYLKQIAL 1995
Query: 575 IVFLSHIGSFVPADAATVG--------LTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IVF++HIG +VPA +AT+G +T + S F+ D+ Q+ L AT S+
Sbjct: 1996 IVFMAHIGCYVPAKSATIGTVTHILTQITSVDSIALNASMFLQDMRQINSALYAATPNSI 2055
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLKFY 685
+LDEFG GT G+ LL +N FV + P V V TH+ +++ LP++ ++
Sbjct: 2056 VILDEFGNGTSEVSGLSLLAAVLNNFVERGIYCPHVFVATHMHRIMS--MLPQNPIIEEQ 2113
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
T + N S + +LYR+ GHA S+ A AG+ ++KRA V+
Sbjct: 2114 TFEFVTNNNGS-----VAYLYRITSGHATCSFAHVAARSAGLDERIVKRALEVI 2162
>gi|317155606|ref|XP_001825231.2| DNA mismatch repair protein Msh5 [Aspergillus oryzae RIB40]
Length = 928
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 334/668 (50%), Gaps = 68/668 (10%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
R ++ S +DM ++V + +G +L L+ R + E+ ++ + +V +SL +
Sbjct: 216 RFLHMRSSIDMENKVTIGCAGAVLTHLQRRRTTISTSSDET-SSYFQVRAVEMLSLQGTM 274
Query: 174 KLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-CVTPMGRRLLRNWF 226
L ALQI +++ HPS + G GR +KEG SV+G+ + +P GR L+ F
Sbjct: 275 FLSGRTLLALQILESESHPSMVNQGPGRKSSSSKEGLSVYGLFQRFAYSPQGRHRLKQIF 334
Query: 227 LRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTAS- 283
LRP +D + + R IS +L + + ++ L +LK++K++ ++ N I T S
Sbjct: 335 LRPSIDTDVIRERHAFISVYLRPDNNDPLSKLTRSLKHIKNLRPVM--INLRKGISTGSG 392
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
T F ++ + L + + I E+L+E +++K + L Y
Sbjct: 393 KITGFKTTVWATLLAFAFYGIDIHEALKETASGNELPLLQKTLRVLEAALLYK------- 445
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
+D++ ++E+G T+V+ G ELD+L+ Y+ L L++VA +P +
Sbjct: 446 VDIDSTEEQGR-TVVKPGLDRELDKLKDSYDGLSSLLKQVAIDIASTIPENLD--IDVNV 502
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE-----TKRLFYHTPKTRELDNL 458
+Y Q+G+ + I L + F SD D E R ++ + RE+D
Sbjct: 503 IYFPQLGFNIAI--------PLNERAEAAFTGSDDDWELIFVTENRAYFKDFRMREMDEK 554
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
LGDIY I + E I +L + + LL+A + +D L+++ A +RP +
Sbjct: 555 LGDIYGLICEKEIEIVYELAQKVLQYEKVLLEASDICGHIDSLLAMSQAASFYRLVRPKI 614
Query: 519 TLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINI---------------------- 556
E ++ I+ GRH+LQE+TV +++PNDT + G++ +
Sbjct: 615 VRENVISIKGGRHILQELTVSSYVPNDTLLVG-GKLGVWAPCSSSKSQTALEAWGTPSML 673
Query: 557 -ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSF 607
+TGPNYSGKS+Y+KQVALI++L+ +GSFVPA++ +G+ D ++ QS+F
Sbjct: 674 LLTGPNYSGKSVYMKQVALIIYLAQVGSFVPAESVEMGIVDKILVKSNSQDSVSQMQSTF 733
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M DL Q+ L+Q T +SL ++DEFGKGT DGIGL+ G + + + + PKV+ TH
Sbjct: 734 MNDLQQISFDLKQMTERSLLIIDEFGKGTSESDGIGLICGILKHLLIVENAPKVIAATHF 793
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E+L L RL M V E + + I +LY G + SYG CA L G+
Sbjct: 794 HEILENEFLKPGPRLLLGHMEVQVCEESCNAEDQITYLYNFHLGRSDKSYGPICAALNGI 853
Query: 728 PAEVIKRA 735
+++RA
Sbjct: 854 NETIVERA 861
>gi|402592979|gb|EJW86906.1| hypothetical protein WUBG_02182 [Wuchereria bancrofti]
Length = 852
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 342/691 (49%), Gaps = 67/691 (9%)
Query: 82 LVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLE 141
L+ S +++E A R+ +L +D L+ +E L +D+ + + A G LL L+
Sbjct: 63 LMPSVAYNFEDAKKRISFL-FESLD--LTNEENNLRLAFRVDLTATNMISAFGALLKYLD 119
Query: 142 NERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSH---MGIG 198
R+ E N I ++ ++L + +++D ++ ALQIFQ D HPS +G
Sbjct: 120 AVRLGVEFEDI---NTKTPISTIKTITLEEMVQIDDSSMRALQIFQDDLHPSACKAYSVG 176
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMASL 256
A+EG S+F M N+C + G LLR WF RP + E L +R+ AI +F+ C+ + +
Sbjct: 177 GAREGISLFRMCNRCQSKSGEALLRRWFERPTTNRETLTNRVTAIHYFVQDCNLDSADFI 236
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLR 315
LK + + ILK+ S T +DW L + C N ++ +RE +L+
Sbjct: 237 RIRLKKICVLKGILKRVKSQRL--TLNDWRN-LYTTC-----NTAQQIMDYIKMREIKLK 288
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD-ELDELRQIYE 374
L D+ + IT A ++E++ N S+ V D LD+L+++Y
Sbjct: 289 LFENDM-RMVGNDITRITAVIFEII------NFSESFVENRFVVNANVDGNLDQLKKLYA 341
Query: 375 ELPEFLEEVASLELVQLPHLCKEMFVPCIV-YIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
LPE L +A +E L VP V YI GYL+ + + + +++ E
Sbjct: 342 SLPETLTHIARMEATALN-------VPSAVCYIPMFGYLLVVPKNTVFPLSVQN--QIEL 392
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+ D L + R+LD +GDI +I+D+E L IC + + +A N
Sbjct: 393 LYETEDA----LHVKNDRMRQLDREIGDIKMEIIDIETNAMLKLKQLICRYDKAIRQATN 448
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRIDN-D 551
A+LDC +SLAL A + N+ P E ++D+ +GRH + E+ T F+PN R
Sbjct: 449 ICAKLDCIISLALTAREYNWYCPRYVDESVIDVDDGRHAIMELLSKTKFVPNPIRSGGAQ 508
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAE 603
++ I+ GPN SGKSIY+KQV +IVFL+HIGSFVPA +AT+G D +
Sbjct: 509 TKVKILMGPNTSGKSIYLKQVGIIVFLAHIGSFVPAKSATIGPVDCIITRMHSLDCVLDG 568
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-----CDVP 658
S+F DL QV + LR+ T SL L+DEFGKGT+ E G+ LL ++NY++ C
Sbjct: 569 MSTFATDLSQVAVALRRGTGNSLILIDEFGKGTVMEAGLSLLTSSLNYWIRKGKTDC--- 625
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
P V +H L++ + L F TM V+ + N F Y+LV G S+
Sbjct: 626 PHVFAVSHFHSLVDH-IVRDVNLLSFLTMDVIVNDGN------FDFQYKLVNGFIDFSHA 678
Query: 719 LHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ A G+ E+IKRA + E + N ++
Sbjct: 679 SYIASKVGIDDEIIKRANQIHECLKCNTPID 709
>gi|378727763|gb|EHY54222.1| DNA mismatch repair protein MSH5 [Exophiala dermatitidis
NIH/UT8656]
Length = 957
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 226/813 (27%), Positives = 387/813 (47%), Gaps = 93/813 (11%)
Query: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE---ESFLSALK 69
RVG +YY ++ +L +E ++ D +I+ +K QP + S +S+ E+ + ++
Sbjct: 101 RVGCAYYIAAEERLLCMEEFDGGGVD--MIERIKLDVQPTTVILSPQSDAASETKDTGVR 158
Query: 70 RS--------DGTTEAPTVKLVKSSIFSYEQAWHRLIYL----------------RVTGM 105
R D +++ S FSYE A ++LI L +
Sbjct: 159 RQVSLIDSDEDNHPLPYEIEIRPSHDFSYESALNKLINLLPFASHDHASEFFVPGEAATL 218
Query: 106 DDGLSIKE--------RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNA 157
++GL +E ++ ++S +D+ + + + G ++ L+ R + N
Sbjct: 219 EEGLQPEELGLTRRRGKLIQVSSWLDLHNRLSIGCMGAVIGYLQRRRSTQYQDDGFDTNL 278
Query: 158 SITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS-HMGIGR---AKEGFSVFGMMNK- 212
+ + L + ++ +LQI Q + P+ H R AKE S+ G+ K
Sbjct: 279 PWRVRRLEMFHLRDIMLVNTDTLMSLQIVQPESSPAAHKQCPRSSVAKEPLSIHGLFQKN 338
Query: 213 CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK 272
TP G+ LLR FLRP LD+E++ RL+ +S F+ + A K K++ I
Sbjct: 339 AKTPQGKVLLRQAFLRPSLDMEHIIKRLDIVSVFVRPDNDGA----CRKLTKNLSKIKNM 394
Query: 273 FNSPSFIYTASD-----WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ + + D + AF + + L + I+++L+E L + A+
Sbjct: 395 RTTTTLLQKGIDSGKQKYNAFKSGVWASLLDFCYHTIEIADTLQEVLGADRLPLFVVASD 454
Query: 328 CITT-ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
+ L + ++ I+D++ S ++ T+++ G ++LD ++ IY+++ + L A
Sbjct: 455 VLDRHSLQRLGRMIYEIVDLDASTDQQR-TVIKPGVNEQLDGIKIIYDDMEDMLTTKAVE 513
Query: 387 ELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL-QGFEFAFSDMDGETKRL 445
LP + + Y+ +G+ + + LD T + + G + + K +
Sbjct: 514 ISRSLP--AGVIVDLEVTYLPHMGFHVGVL---LDAATGQPVYDGRQLGWQRTFNTEKMV 568
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
++ ELD LGD+Y I D+E I DL + + L+ A + ELDC L+ A
Sbjct: 569 YFKNAAMNELDEDLGDLYANICDLEIEIAYDLAQKVLEEAKLLVTASDICGELDCNLAFA 628
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT----------------RID 549
A Q RP +T + +++I+ GRH+LQE+TV +F+PNDT
Sbjct: 629 HTARQYKMTRPRMTEDNVIEIKGGRHLLQELTVPSFVPNDTFLVGGRGDGGGGGRNHNTT 688
Query: 550 NDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHM 600
DG + I+TGPNYSGKS+Y KQVAL V+++ +GS+VPADAAT+G+TD + +
Sbjct: 689 TDGPSLLILTGPNYSGKSVYQKQVALAVYMAQVGSYVPADAATIGITDKIYTRITSRESV 748
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PP 659
++ S+FMID+ Q+ M L T SL ++DEFGKGT + DG GL G + + + P
Sbjct: 749 SSIGSAFMIDMQQIAMALNSCTRTSLIVIDEFGKGTDSCDGAGLAAGVLQHLSSLGPETP 808
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVL------RPENNSTDVEDIVFLYRLVPGHA 713
K LV TH E+ G + + F M V R E +S+ ++ LY L PG +
Sbjct: 809 KALVATHFHEIFELGLFDTATNIAFAHMEVRVDERKGRHEGHSS--TEVTHLYNLRPGRS 866
Query: 714 LLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
SYG+ CA GVP EV++RA + ++N +
Sbjct: 867 DTSYGVQCAAQNGVPREVVERANELARLSRNGE 899
>gi|115491555|ref|XP_001210405.1| predicted protein [Aspergillus terreus NIH2624]
gi|114197265|gb|EAU38965.1| predicted protein [Aspergillus terreus NIH2624]
Length = 792
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 227/803 (28%), Positives = 369/803 (45%), Gaps = 143/803 (17%)
Query: 8 ILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSA 67
I + VG SYY + L++L + + ++ L+D + Q +P ++ TS + + S S
Sbjct: 26 IRNSGTVGCSYYSAQEETLYLLGDLQSAGAE--LVDSLVLQTKPTVLLTSPRVD-SVDSP 82
Query: 68 LKRS---DGTTEA--P-TVKLVKSSIFSYEQAWHRLIYLRVTGMD----------DGLSI 111
R D T + P + S F+Y A ++L L ++ +GL
Sbjct: 83 SNRGLGQDANTHSYLPYQLDARPSQEFNYVNARNKLAALEISSTHENRIRFLVPHNGLVD 142
Query: 112 KE--------------RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNA 157
E R+ ++ S +DM + V + +G +L L+ R + E +
Sbjct: 143 TEELDTDNLDFTLQEGRLLHMASSIDMANAVTIGCAGAVLTHLQRRRATIS-ESSDQSCG 201
Query: 158 SITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIG------RAKEGFSVFGMMN 211
++S+ L + ++A ALQI +++ HPS + G RAKEG SV+G+
Sbjct: 202 VFRVNSIEMFCLTGTMFVNARTLVALQIMESESHPSAINQGPGTKSSRAKEGLSVYGLFQ 261
Query: 212 KCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIPH 268
+ TP GR L+ FLRP ++L+ + R IS +L E + L ++LK++K++ +
Sbjct: 262 RFAHTPQGRNRLKQIFLRPSIELDVIRERHAFISVYLRPENYNPLEKLVKSLKHIKNLHY 321
Query: 269 ILKKFNSPSFIYTASDWTAFLKSI--CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAA 326
++ N I T S K+ +LL + FE
Sbjct: 322 VM--VNLRKGISTGSGKITGFKTTVWATLLAALRAFEAA--------------------- 358
Query: 327 SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
+L V ++ I+D++ S+E+G T+V+ G ELD+++ Y+ L L++VA
Sbjct: 359 -----QLYRVGRMIQEIVDIDGSEEQGR-TVVKPGLDRELDKMKDNYDGLSNLLKQVAIE 412
Query: 387 ELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
+P ++Y Q+G+ + I L+D G + + R +
Sbjct: 413 IAATIPESLD--IDVNVIYFPQLGFNIAI---PLNDRGEAAYDGTREGWEPVFITENRAY 467
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ + RE+D LGDIY I + E I DL + + LL+A + ++D
Sbjct: 468 FKDFRMREMDETLGDIYGLICEKEIEIVYDLAQRVLQYEKVLLQASDICGQID------- 520
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--DNDGRIN--------- 555
RH+LQE+TV +++PNDT + N +N
Sbjct: 521 -----------------------RHILQELTVSSYVPNDTLLMGGNSDSVNHAPRDGMGV 557
Query: 556 ---------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--- 597
++TGPNYSGKS+Y+KQVALI +L+ +GSFVPAD A +G+TD
Sbjct: 558 HTPRVVGSERAPNMLLLTGPNYSGKSVYMKQVALITYLAQLGSFVPADNAEIGITDKILV 617
Query: 598 -----KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
++ QS+FM DL Q+ L+QATS+SL ++DEFGKGT DG+GL G NY
Sbjct: 618 KSNSEDSVSQIQSTFMNDLQQISFDLKQATSRSLLIIDEFGKGTNESDGVGLACGIFNYL 677
Query: 653 VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ C+ PPKV+ THL E+L G L RL+ M V E++ + I +LY G
Sbjct: 678 LQCEEPPKVIASTHLHEILENGFLELGPRLQLGHMEVKISEDSQNAEDQITYLYNFRLGP 737
Query: 713 ALLSYGLHCALLAGVPAEVIKRA 735
+ S+G CA + G+ ++ RA
Sbjct: 738 STKSFGTICAAMNGIDQRIVARA 760
>gi|452846731|gb|EME48663.1| hypothetical protein DOTSEDRAFT_57974 [Dothistroma septosporum
NZE10]
Length = 858
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 238/819 (29%), Positives = 384/819 (46%), Gaps = 124/819 (15%)
Query: 41 LIDIVKYQAQPQIIYTSTKSEESFLSALK------------RSDGTTEAPTVKLVKSSIF 88
++D+++ P I TS K ++ + L RSD T ++ + F
Sbjct: 11 IVDLLRLYIDPTTILTSAKCNDAAIDRLDPDVRNQGASEDGRSDQTRLPYLLECRPDAEF 70
Query: 89 SYEQAWHRLIYLRVTGMDDGLSIK--------------------------ERICYLNSMM 122
Y+ A ++L+ LR+ G +DG + ++ L+ +
Sbjct: 71 KYDVARNKLVNLRI-GQEDGPGLTYVVPGDVVAEQDYHDLRQDAGFAGRHAQLLRLSGWV 129
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
+M S + V +G + + L+ R L +A I +V +L + +++ +
Sbjct: 130 NMDSRLTVGCAGAVTSYLQRRRATAYLPGDREADALFRISTVEMFTLKDSMFINSDTLTS 189
Query: 183 LQIFQTDKHPSHMGIGRA---------KEGFSVFGMMNKCV-TPMGRRLLRNWFLRPILD 232
LQI T+ HP+ G A KEG SV+G+ ++ T GR LLR +FLRP L+
Sbjct: 190 LQIMSTESHPNAQQGGPAGNKNSSGGSKEGLSVYGLFHQLAKTSQGRLLLRQYFLRPSLN 249
Query: 233 LENLNSRLNAISFFLCSEELMA--SLHETLKYVKDI----PHILKKFNSPSFIY-----T 281
++ + R I+ L E + L + L VK++ ++ K NS
Sbjct: 250 MDVIKERHETIAVLLDPENAVGLERLIKELSNVKNMRIVMTNLRKGINSGPAKQGRDGIA 309
Query: 282 ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI-TTELAYVYELV 340
S W + + + S L ++ + G+ ++ + I K + + A + +L+
Sbjct: 310 TSVWDSLRRFMFSALEISDLL-AGMRDAA-------HLSICSKVSERFDRQQYAAIGQLI 361
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ ID + SK T+V+ G ELD+ R IY + + L ++A+ +P K
Sbjct: 362 VDTIDFDESK-SARRTVVKHGVDQELDDARHIYAGIEDMLSQIATHVARDVPPDLKRDI- 419
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTL--EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
+++ QIG+L+ + +E+ T + +E FS + ++ ELD
Sbjct: 420 -NVLFFPQIGFLISLAKEEATVATYCGPPDEPWEKMFSSLSA----TYFKNAAMIELDGR 474
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAV-NFAAELDCFLSLALVAHQNNYMRPI 517
GDIY ILDME ++L + + +HL+ + + E+D ++LA A Q N +RP
Sbjct: 475 FGDIYGHILDMELEFVQNLAQRVLEY-EHLINSTSDICGEIDSLVALACGAKQYNLVRPR 533
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDT----------------------RIDND---- 551
+T + ++ ++ GRH+LQE+TV FI NDT +ID
Sbjct: 534 MTRDNIIKVKEGRHILQELTVPRFIANDTLLVGGQSSNEEERRQRMTPYQAQIDRSQILP 593
Query: 552 GRIN------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTA 602
GR + ++TGPNYSGKSIY+KQVA++V+++HIGSFVPA A +GLTD ++ T
Sbjct: 594 GRSHTGPSMLLLTGPNYSGKSIYLKQVAILVYMAHIGSFVPAVDAQIGLTDKILTRISTK 653
Query: 603 E-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CD 656
E QSSFMIDL Q + + QAT SL ++DEFGKGT + DG GL G +F+ D
Sbjct: 654 ESVSRIQSSFMIDLQQASVAVAQATRHSLVIIDEFGKGTESYDGAGLAAGVFEHFLQRGD 713
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALL 715
PKVL TH E+ G L L F M V + + ++ DVE + FLY L +
Sbjct: 714 ECPKVLGATHFHEIFEAGFLAPRPSLAFAHMQV-QLDTDAEDVESQVTFLYNLCLERSTS 772
Query: 716 SYGLHCALLAGVPAEVIKRA-AYVLEAAQNNKHVERWSH 753
S G CA + G+ V+ RA +L AA+ VE S+
Sbjct: 773 SLGTSCAAMNGIDKRVVDRAEELILLAARGEDLVEACSN 811
>gi|425779302|gb|EKV17369.1| DNA mismatch repair protein Msh5, putative [Penicillium digitatum
PHI26]
gi|425779587|gb|EKV17632.1| DNA mismatch repair protein Msh5, putative [Penicillium digitatum
Pd1]
Length = 819
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 226/770 (29%), Positives = 375/770 (48%), Gaps = 105/770 (13%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTK----SEESFL 65
HG VG SYY + ++++L + D +D + Q +P ++ TS + S+
Sbjct: 89 HGT-VGCSYYSTEEEKMYLL--GDSRLGDMETVDALLLQIKPTVVLTSPRVDLNSQNQDQ 145
Query: 66 SALKRSDGTTEAP-TVKLVKSSIFSYEQAWHRLIYLRVTGMDD----------------- 107
+ + + P + + +S FSY A +++ L ++ +
Sbjct: 146 NLAQEDVSSAYLPYQIDIRPTSEFSYSNAESKILALEISATHEQRIRFFVPQNGLAGPEE 205
Query: 108 ------GLSIKE-RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT 160
G +++E R+ +++S +DM + V + +G +L L+ R E GN
Sbjct: 206 VDPEEMGFTLQEGRLLHISSSVDMENPVTIGCAGAILTYLQRRRAA-APSSFEDGN-EYR 263
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-C 213
+ ++ +L + +++ +LQI Q++ HPS + G G+ KEG SV+G+
Sbjct: 264 VRALQMFNLRDMMWINSNTFTSLQIIQSESHPSMFNQGPGKKSATGKEGLSVYGLFRHFA 323
Query: 214 VTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILK 271
TP GR L+ F RP +DL+ + R + I F E L A + + LK+VK++ ++
Sbjct: 324 YTPQGRARLKQIFFRPSVDLDTIRERHDFIGVFSRPENLAALDKIIKALKHVKNLRPVM- 382
Query: 272 KFNSPSFIYTAS-DWTAFLKSI-CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI 329
N I T S T F ++ SLL K+FE
Sbjct: 383 -VNLRKGISTGSAKITGFKTTVWASLLAAVKVFEAA------------------------ 417
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
+L V ++ I+D++ S+E+G T+V++G +LD+++ Y+ L L+ VA L++
Sbjct: 418 --QLYRVGRMIQEIVDIDNSEEQGR-TVVKQGVDRDLDKIKDRYDGLNSLLKHVA-LDIA 473
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
+ E+ V ++Y Q+G+ + I L + G + + M R ++
Sbjct: 474 ATIPVTLEVDV-NVIYFPQLGFNIAI---PLKNHGAAAYAGSDDEWDLMFVTENRAYFKD 529
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
+ RE+D LGD+Y I + E I DL + + + L+ A + ++D L+L A
Sbjct: 530 FRMREMDEKLGDLYSFICEKEIEIVYDLAQRVLRYENVLVDASDLCGDIDSLLALTQAAS 589
Query: 510 QNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTR---------------IDNDGRI 554
RP + + ++ I+ GRH+LQE+TV +++PNDT ID+ +
Sbjct: 590 FYKLTRPRMVEQNVIRIKGGRHILQELTVSSYVPNDTLLVGGNESETCDASSFIDSYPSM 649
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSS 606
++TGPNYSGKS+YIKQ+ALIV+L+ IGSFVPA +A +G+TD +K T E QS+
Sbjct: 650 LLLTGPNYSGKSVYIKQIALIVYLAQIGSFVPAHSAELGVTDKILTKINTQESVSKVQST 709
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
FM DL Q+ + LRQ T++SL ++DEFGKGT DGIGL G ++Y + P K + TH
Sbjct: 710 FMSDLQQISLCLRQVTNRSLVIIDEFGKGTNESDGIGLACGILDYLLCFKYPAKAIAATH 769
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALL 715
E+ L RL+ M V E T VED I +LY+ + LL
Sbjct: 770 FHEIFENNFLSLQPRLQLGHMEVQVCEE--TQVEDQITYLYKYLKRRRLL 817
>gi|405117906|gb|AFR92681.1| msh5 [Cryptococcus neoformans var. grubii H99]
Length = 934
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 241/821 (29%), Positives = 373/821 (45%), Gaps = 160/821 (19%)
Query: 9 LHGHRVG---VSYYDSSIRQLHVLEVWEDS-NSDFPLIDIVKYQAQPQIIYTSTKSEESF 64
LHG G ++YD R++ VLE +D+ N D ++ Q +P +I STK++ S
Sbjct: 89 LHGPFTGNLAAAWYDPEERKIQVLEDTKDTLNWDLACLE----QVRPTLIIMSTKTQNSL 144
Query: 65 LSALKRS------DG------TTEA-------------------------PTVKLVKSSI 87
+ ++ DG T EA +V+L SS+
Sbjct: 145 MDKVEEYRQLPLFDGIKGALLTLEAGDENKCEVLLLPSRSCSPKAASIHLASVRLSDSSV 204
Query: 88 -FSYEQAWHRLIYLRVTGMD-DGLSIKER----------ICYLNSMMDMGSEVQVRASGG 135
A + +Y +G +G + +E + L M++ + + A+G
Sbjct: 205 TLPLCCAEGQSVYQSRSGSTIEGANWREEGAGMGMYRLSLVKLGCWMNISAPLATVAAGV 264
Query: 136 LLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHM 195
L+ ++ RI++ + ++ N + L +D + L IF + H S M
Sbjct: 265 LVEQVKKSRIMEAMPGEQHLNG---------LELTALESMDFS----LAIFDVESHAS-M 310
Query: 196 GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LM 253
+ K+ S+FG ++ VTP+G++LL W LRP+LDL +++R +A+ FF +E
Sbjct: 311 YSDQDKQALSIFGKLDSTVTPLGKKLLHTWHLRPLLDLSEISARHDAVQFFSSTENAPFT 370
Query: 254 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
SL + +K V+++P K + Y +W V I E++ +
Sbjct: 371 TSLRKIMKGVRNVPAHCTKLQTGRGGYV--EWKCL---------------VDIRETITDN 413
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
L + D+ +ID + S+ + VR G DELD R++Y
Sbjct: 414 LIIFCQDMN-------------------AVIDWDASRLESR-VAVRPGVDDELDSWREVY 453
Query: 374 EE------------------LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
L L +VA + Q+P F +VY+ Q+GYL I
Sbjct: 454 AGMRCRHYLMYLIRLTFIIGLDATLNQVALMIYPQVPPGIS--FSVNVVYLPQLGYLAVI 511
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ D ++ G+E R +Y T + +LD+ GD+Y ++ E I +
Sbjct: 512 ---QADADEPPEIPGWESRLLWQFHTEDRYYYKTAEMEDLDDHFGDLYTLMIGKEIEIIQ 568
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
LV H+ + +L+ + AELDC L+LA A RPI+ EP+L I+ GRH+L E
Sbjct: 569 RLVEHLKGYETSILRTADAIAELDCILALARAARDFGLKRPIMREEPVLQIRGGRHILYE 628
Query: 536 MTVDTFIPNDTRIDNDG-----RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
V +I NDT I + G + IITG N SGKS Y KQVAL+ F++ IGSFVPA+ A
Sbjct: 629 SLVPRYIENDTMIASGGIDGLASMMIITGANGSGKSAYGKQVALMAFMAQIGSFVPAEEA 688
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G+ D + + S+FMIDL QV LR AT SL ++DEFGKGT DG
Sbjct: 689 RIGICDKIFTRLQTRESTSKHASAFMIDLGQVSQALRGATRHSLIIMDEFGKGTHPTDGA 748
Query: 643 GLLGGTINYFVTCDVPPKVLVCTHLTEL-----LNEGCLPKSERLKFYTMSVLRPENNST 697
LL GTI Y + V P+ +V TH EL + E LP ++F M L +
Sbjct: 749 ALLAGTIEYLLQ-GVCPRSIVMTHFHELFSNHFITEDRLP----VRFCHMKTLL----TN 799
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
D +D+ +LY+LVP +L S CAL G+P ++ RA V
Sbjct: 800 DSDDMQYLYKLVPSLSLTSNAAECALRHGIPKNIVDRAQEV 840
>gi|327349363|gb|EGE78220.1| hypothetical protein BDDG_01157 [Ajellomyces dermatitidis ATCC
18188]
Length = 967
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 234/816 (28%), Positives = 399/816 (48%), Gaps = 101/816 (12%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
QV MA + VG YY ++ ++L++LE + ++ I+ +K QP ++ ST++
Sbjct: 89 QVVMAMDMKERCSVGCCYYVAAEQKLYLLE--DITSGGLEAIETLKLDVQPTLVLLSTRA 146
Query: 61 EESFLSALKRSDGTTEAPT-----------VKLVKSSIFSYEQAWHRLIYL--------- 100
++S + + G A V+ V+ F++E A +L L
Sbjct: 147 DQSTPNLGQTGLGMHTADNGDQFQLPYHLDVRPVQE--FNFEGAKLKLASLPLSTSRSET 204
Query: 101 RVTGMDDGLSIKE--------------RICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
R D S+K+ R+ L+ +DM + + + +G ++ L+ +R
Sbjct: 205 RFLVPGDTFSLKQNGDENDLGFTDHQGRLLNLSGSIDMDNRISIGCAGAIITYLQRKRAA 264
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----A 200
+ L + SG+ I S+ SL + ++ +LQ+ Q++ HP+ + G G+ A
Sbjct: 265 ECLTRDSSGSELFNIKSLEMRSLRDTMFVNTDTLTSLQVIQSESHPNAFNQGPGKTSPGA 324
Query: 201 KEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLH 257
KE S++G+ + TP G+ LR FLRP D ++ + IS +L + E + L
Sbjct: 325 KESLSIYGLFHHFARTPHGKTRLRQRFLRPSTDAAHIKEGHDFISTYLRPDNGECIEKLT 384
Query: 258 ETLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
++LK +K++ H+ K +S + + + AF + + L + + +++R
Sbjct: 385 KSLKGIKNLRPVMVHVQKGISSGN-----AKFKAFKSGVWATLLEFAFHAIDVHDTIRTV 439
Query: 314 LRLLNFDIVEKAASCITTELAY-VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ N DI +A + + + V ++ +D+ S ++ + T+V+ ELD+L++
Sbjct: 440 MGAENLDIHLRALEKLDVAILHQVGRIIHETVDLQSSIDE-HRTVVKPRVDRELDDLKET 498
Query: 373 YEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
Y L L +VA +P L ++ V +Y Q+G+ + + LD+ G
Sbjct: 499 YNGLDSLLNQVAINIAGTIPSRLSNDVNV---IYFPQLGFNIAM---PLDERGRALYDGG 552
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
E + + R+++ + RE+D GDIY I + E I ++ ++ L+ A
Sbjct: 553 EQPWDQVFTTENRVYFKDFRMREMDEKFGDIYGLICEKEIEIVYEMAQNVLQHEKFLVDA 612
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-DN 550
+ ++D L+L A +RP +T + + I+ GRH+L E+TV TFIPNDT I
Sbjct: 613 SDICGDIDSLLALVQGASLYKLVRPQITQDNSIVIKGGRHLLYEVTVPTFIPNDTLIVGG 672
Query: 551 DGRIN-------------------------IITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+GR ++TGPNYSGKS+Y+KQVALIV++SHIGSFV
Sbjct: 673 NGREGSPPNTSTQSLETSVEVAETQCPSMLLLTGPNYSGKSVYLKQVALIVYMSHIGSFV 732
Query: 586 PADAATVGLTD---SKHMTAE--QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
PA+ A +G+TD ++ T E QSSFMIDL Q+ L AT SL ++DEFGKGT + D
Sbjct: 733 PAERAKIGITDKILTRITTRETTQSSFMIDLQQISFALNLATEHSLVIIDEFGKGTESTD 792
Query: 641 GIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDV 699
G GL G Y ++ + PKVL TH E+ G LP + L F M V + + + +V
Sbjct: 793 GAGLACGLFEYLLSLGEKRPKVLAATHFHEIFENGFLPPRKELDFGYMEV-QVDPAAREV 851
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
E+ ++ +R G + S+G +CA L G+ +I RA
Sbjct: 852 ENQLYSFR--SGRSNASFGTNCAALNGIDQAIISRA 885
>gi|328856396|gb|EGG05517.1| hypothetical protein MELLADRAFT_116742 [Melampsora larici-populina
98AG31]
Length = 807
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 317/647 (48%), Gaps = 85/647 (13%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S++ FL + + A +LQIF + H +++ + KEG S++G++N+CVT GR LL+NW
Sbjct: 118 LSMSIFLHIGSDALRSLQIFDQEAH-ANLHSNKTKEGLSLYGILNECVTYSGRMLLKNWL 176
Query: 227 LRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
+RP L+ +++R NA+ FL SE + + LK ++ +S +
Sbjct: 177 IRPSTQLDIISARANAVQCFLDSENEHCAGRMRQYLKSTGNLARTTMIVSSGKG--RVGE 234
Query: 285 WTA---FLKSICSLLHVNKIFEVGISESLREQL--RLLNFDIVEKAASCITTELAYVYEL 339
W + F+++ ++ +K F I L+ L R+ N D T+EL +
Sbjct: 235 WRSVLNFMRAAVNICEESKSF---IDSDLKIGLISRISNSD-------QHTSELNEQAKK 284
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ +ID SK G +V+ G DELDELR+ Y L L+ +A + P L F
Sbjct: 285 IDLVIDWEESKINGGRVIVKSGIDDELDELRESYAGLESQLDHLARKLSAETPFLSAPDF 344
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQL--QGFEFAFSDMDGETKRLFYHTPKTRELDN 457
IVY QIGYL C D E+ G+EF F+ L Y R+LD+
Sbjct: 345 --SIVYFPQIGYL-CRVPRNSDHQEAEEPFHDGWEFQFA----TDTHLHYKNEHMRDLDH 397
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+GD+ I E I L + + + S LL + AELDC LSLA +AH ++RP+
Sbjct: 398 YIGDLTTSITVREIEIVTALEAALAVISPILLNLASDMAELDCLLSLAKIAHLREWVRPV 457
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDT------------------------------- 546
+ E +++I+ GRH L E V++FI NDT
Sbjct: 458 MVEENVIEIEGGRHPLVEACVESFIENDTYMVGGKGLSSKEDTKNQKDLTPEEDINMSIE 517
Query: 547 -------RIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS-- 597
I + ++TG N+SGKS+Y+KQVA+IV LS IGS++PA A +G+ D+
Sbjct: 518 EEEEETQEISKAHSMIVLTGANFSGKSVYLKQVAMIVILSQIGSYIPAKKAKIGIHDAIF 577
Query: 598 ------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
+ + S+FM+DL QV MLR + +SL LLDEFGKGT DG + + +
Sbjct: 578 TRVTSTESSSRNSSAFMMDLQQVSFMLRNCSRRSLLLLDEFGKGTDPIDGQAIFCSVVEH 637
Query: 652 FVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN--------NSTDVEDI 702
+ + PK ++ TH + + G +P + + MS++ N +STD+E
Sbjct: 638 LIRRGIECPKTILSTHFHAVFSSGSMPVGLPIHYCHMSIILSTNAHQSNSNRSSTDLEP- 696
Query: 703 VFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+LY+L PG LS+ L CA L G P V RA V EA ++ +E
Sbjct: 697 TYLYKLSPGLVTLSHALGCAALFGAPIHVRLRAQGVSEALSKHEMLE 743
>gi|451998969|gb|EMD91432.1| hypothetical protein COCHEDRAFT_1155804 [Cochliobolus
heterostrophus C5]
Length = 925
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 230/801 (28%), Positives = 370/801 (46%), Gaps = 91/801 (11%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
VG YY +S +L+ +E + + D ++D ++ P +I STK ++ +
Sbjct: 100 VGCCYYIASEERLYFMEDVQFGHVD--VVDSLRIYIDPTVILVSTKIDDKVIDCFDPDAK 157
Query: 74 TTEAPTVKLV------KSSIFSYEQAWHRLIYLRVTGMDDGLSI---------------- 111
+ + +L S F+Y+ A ++L LR+ G DD I
Sbjct: 158 SGDNDQFRLPFLLEIRPPSEFNYDCAKNKLANLRL-GEDDDTHIEFNIPGELATVGHPGK 216
Query: 112 ------KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVI 165
+ ++ L +D+ S V +G L++ L+ R L S + I +
Sbjct: 217 GQSAGQQGQLLRLAGWIDLESRSTVGCAGALISYLQRRRAAAYLPGDRSADLMFRISKLE 276
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAK------EGFSVFGMMNKCV-TPMG 218
SL + + ++ +LQI + HP+ G K EG S++G+ + T G
Sbjct: 277 MCSLRETMFINTDTLHSLQIMGAESHPNSHNKGPTKATSGDKEGLSIYGLYHHLARTQQG 336
Query: 219 RRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHI------LKK 272
R LLR FLRP L+L+ +N RL+ +S F + A L +K +K++ ++ L+K
Sbjct: 337 RFLLRQQFLRPSLNLDVINERLDTVSIFTRPDNDSA-LQALVKNLKNLGNMRVTMVNLRK 395
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT- 331
S S T F KSI + + I ++L++ + N I K +
Sbjct: 396 GASSSTRGTG----GFAKSIWMSIRAFAFHALKIKDTLQDVIGGENLVIRNKVFEKLEGY 451
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
LA + + ID+ S E+G T++ G +ELD+++ + L + L +VA ++
Sbjct: 452 HLAQIGRKISETIDLAGSAEEGR-TVIMPGIDEELDQMKLTLDSLDDLLNQVARKLSEKM 510
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P + ++Y QIG+L C D + + M ++++ +
Sbjct: 511 PSGLRATL--NVIYFPQIGFL-CTTPIDPDTGGAVYDGSLDHPWERMFATEDQIYFKNSE 567
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
TRE+D GD+Y I D E I+ +L ++ + + L + ELD L+LA A
Sbjct: 568 TREMDEHFGDVYGIIADREIEISHELAQYLLQYEELLTSCSDICGELDSLLALAQAAKIY 627
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------------------- 548
RP +T E + I+ GRH+LQE+ V +F+ NDT +
Sbjct: 628 KLCRPEITYENTIRIKGGRHMLQELLVSSFVANDTAMKGGDGEVASEQHDDRLFTSPTIR 687
Query: 549 -----DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHM 600
+N+ + I+TGPNYSGKS+Y+KQVALIV+++H+G FVPAD A +GLTD S+
Sbjct: 688 QAHAYENNPSMLILTGPNYSGKSVYLKQVALIVYMAHVGGFVPADTARIGLTDKILSRVT 747
Query: 601 TAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
T E QSSFM++L Q+ + L AT +SL L+DEFGKGT + DG GL + Y +
Sbjct: 748 TRETVSHYQSSFMLELQQISLALSLATRRSLLLIDEFGKGTASSDGAGLACAVMEYLLNL 807
Query: 656 DVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
PKV+ TH E+ L L F M V I +LY G +
Sbjct: 808 GSERPKVIGATHFHEIFEMDLLKPRPTLGFGYMEVRVDTEAKKINSQITYLYNFREGRST 867
Query: 715 LSYGLHCALLAGVPAEVIKRA 735
S+G CA + GVP+E+++RA
Sbjct: 868 SSFGTCCAAMNGVPSEIVQRA 888
>gi|393907682|gb|EJD74740.1| hypothetical protein LOAG_17989 [Loa loa]
Length = 736
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 215/698 (30%), Positives = 348/698 (49%), Gaps = 81/698 (11%)
Query: 82 LVKSSIFSYEQAWHRLI----YLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLL 137
L+ + +++E A R++ L +T ++ L + RI D+ + + A G LL
Sbjct: 47 LMPNIAYNFEDAKKRILPLFESLNLTKEENNLRLAFRI-------DLTATNMISAFGALL 99
Query: 138 AVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSH--- 194
L+ R+ E N I ++ ++L + +++D++ ALQIFQ + HPS
Sbjct: 100 KYLDAVRLGVEFEDI---NTKTPITAIKSITLEEIVQVDSSTKRALQIFQDELHPSACKA 156
Query: 195 MGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEEL 252
IG +EG S+F M N+C + G LLR WF RP + E L +R+ AI +F C+ +
Sbjct: 157 YSIGDTREGISLFRMCNRCQSKSGEALLRRWFERPTTNRETLTNRVTAIHYFAQDCNLDA 216
Query: 253 MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS----LLHVNKIFEVGISE 308
+ LK + + ILK+ S T +DW L + C+ ++ + E+ ++
Sbjct: 217 ADFIRIRLKKICILKGILKRVKSQRL--TLNDWRN-LYTTCNAAQQIMDYVRTREIKLT- 272
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDE-LD 367
L ++++++ DIV IT A ++E+V N S+ V DE LD
Sbjct: 273 LLDDEMKMVGNDIVR-----IT---AVIFEVV------NFSESFMENRFVVNANVDENLD 318
Query: 368 ELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC-IVYIHQIGYLMCIFEEKLDDTTLE 426
+L+++Y LPE L +A +E + L VP + YI GYL+ + + ++L+
Sbjct: 319 QLKKLYASLPETLTHIARMEAITLN-------VPSSVCYIPMFGYLLVVPKNTAFPSSLQ 371
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
E + D + + R+LD +GDI +I+D+E L IC
Sbjct: 372 N--EIEILYETDDA----IHVKNERMRQLDREIGDIKMEIIDIETNAMLKLKQLICRHDK 425
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM-TVDTFIPND 545
+ +A+ A LDC +SLAL A + ++ P E ++D+ GRH + E+ + + FIPN
Sbjct: 426 AIRQAIYICATLDCIISLALTAREYDWYCPRYVDESVIDVDGGRHAIMELLSKNKFIPNP 485
Query: 546 TRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMT 601
R ++ I+ GPN SGKSIY+KQ+ +I+FL+HIGSFVPA +A +G D ++ T
Sbjct: 486 IRSGGAQTKVKILMGPNASGKSIYLKQIGIIIFLAHIGSFVPAKSAIIGPVDRIITRMHT 545
Query: 602 AE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-- 654
+ S+F DL Q+ + LR+ T SL L+DEFGKGT+ E G+ LL ++NY++
Sbjct: 546 LDCVLDGMSTFATDLSQIAVALRRGTGNSLILIDEFGKGTVMEAGLSLLTSSLNYWIRKG 605
Query: 655 ---CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
C P V +H L++ + L F TM V+ + N F Y+LV G
Sbjct: 606 KTDC---PHVFAVSHFHSLIDH-IVKDVNLLSFLTMDVILNDGN------FDFQYKLVDG 655
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
SY H A G+ E+I+RA V E + NK ++
Sbjct: 656 FIDFSYASHIASKVGIDDEIIERANQVYECLKYNKPID 693
>gi|451848393|gb|EMD61699.1| hypothetical protein COCSADRAFT_344603 [Cochliobolus sativus
ND90Pr]
Length = 954
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 236/816 (28%), Positives = 384/816 (47%), Gaps = 95/816 (11%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
+V MA L+ VG YY +S +L+ +E + + D ++D ++ P +I STK
Sbjct: 92 EVVMAVDLNTRGTVGCCYYIASEERLYFMEDIQYGHVD--VVDSLRIYIDPTVILVSTKI 149
Query: 61 EESFLSALKRSDGTTEAPTVKLV------KSSIFSYEQAWHRLIYLRVTGMDDGLSI--- 111
++ + +++ +L S F+Y+ A ++L L + G DD I
Sbjct: 150 DDKVIDCFDPDAKSSDNDQFRLPFLLEVRPPSEFNYDSAKNKLASLHL-GEDDSTHIEFN 208
Query: 112 -------------------KERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQK 152
+ ++ L +D+ S V +G L++ L+ R L
Sbjct: 209 IPGELATVSHPGKGQSAGQQGQLLRLAGWIDLESRSTVGCAGALMSYLQRRRAAAYLPGD 268
Query: 153 ESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SH-MGIGRA----KEGFSV 206
S + I + SL + + ++ +LQI + HP SH G +A KEG S+
Sbjct: 269 HSADLMFRISKLEMCSLRETMFINTDTLHSLQIMGAESHPHSHNKGPTKASSGDKEGLSI 328
Query: 207 FGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKD 265
+G+ + T GR LLR FLRP L+L +N RL+ +S F + ++L +K + +
Sbjct: 329 YGLYHHLARTQQGRFLLRRQFLRPSLNLAVINERLDTVSIFTRPDN-ESALQALVKNLNN 387
Query: 266 IPHI------LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF 319
+ ++ L+K + S T F KSI + + + I ++L++ + N
Sbjct: 388 LGNMRITMVNLRKGANSSTRGTG----GFAKSIWTSIRAFAFHALKIKDTLQDVIGGENL 443
Query: 320 DIVEKAASCITT-ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
I K + LA + + ID+ S E+G T++ G +ELD+++ + L +
Sbjct: 444 VIRNKIFEKLEGYHLAQIGRKISETIDLAGSAEEGR-TVIMLGIDEELDQMKLTLDSLDD 502
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
L +VA ++P + ++Y QIG+L C D + + M
Sbjct: 503 LLNQVARKLSEKMPSDLRATL--NVIYFPQIGFL-CTTPIDPDTGGAVYDGSLDHPWERM 559
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+++++ +TRE+D GD+Y I D E ++ +L ++ + + L + EL
Sbjct: 560 FATEEQVYFKNSETREMDEHFGDVYGIIADREIELSHELAQYLLQYEELLTTCSDICGEL 619
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI---DNDGRIN 555
D L+LA A RP +T E + I+ GRH+LQE+ +F+ NDT + D DG I
Sbjct: 620 DSLLALAQAAKIYKLCRPEITYENTIRIKGGRHMLQELLASSFVANDTAMKGGDGDGEIA 679
Query: 556 --------------------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
I+TGPNYSGKS+Y+KQVALIV+++H+G FVPAD
Sbjct: 680 SEQHDRLLTSPTTRQAHAYENSPSMLILTGPNYSGKSVYLKQVALIVYMAHVGGFVPADT 739
Query: 590 ATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +GLTD S+ T E QSSFM++L Q+ + L AT +SL L+DEFGKGT + DG
Sbjct: 740 ARIGLTDKILSRVTTRETVSHYQSSFMLELQQISLALSLATRRSLLLIDEFGKGTASSDG 799
Query: 642 IGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE 700
GL + Y + PKV+ TH E+ L L F M V R + + +
Sbjct: 800 AGLACAVMEYLLKLGSERPKVIGATHFHEIFEMDLLKPRPTLGFGYMEV-RVDTEAKKIN 858
Query: 701 D-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
D I +LY G + S+G CA + GVP+E+++RA
Sbjct: 859 DQITYLYNFREGRSTSSFGTCCAAMNGVPSEIVQRA 894
>gi|389744875|gb|EIM86057.1| hypothetical protein STEHIDRAFT_80241 [Stereum hirsutum FP-91666
SS1]
Length = 892
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 250/824 (30%), Positives = 387/824 (46%), Gaps = 123/824 (14%)
Query: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKR-- 70
R+ +YYD R ++VLE E+ N F L ++ Q P I TS+++++ F+S ++
Sbjct: 28 RLACAYYDPVKRFVYVLEDTEE-NVHFDLTKMLFEQTSPDAIITSSRADDGFISVCQKYV 86
Query: 71 --SDGTTE-APTVKLVKSSIFSYEQAWHRLIYLRV----TGMDDGLSIKERICY------ 117
S GT + P S ++ + L L G D G R Y
Sbjct: 87 DASGGTFQIRPHKDFTPSKGRNHLLSLGFLSSLEAEEGADGSDLGSVSDARSAYEFMRRR 146
Query: 118 -----------LNSMMDMGSEVQVRAS-------GGLLAVLENERIVDTLEQKESGNASI 159
N+ + M + V + G LL + ER V L+ + G A +
Sbjct: 147 KDKYGDPTMRRWNASIRMSNFAAVDTAPLCVSCIGALLDQMARERAVGELD--DEGVAGL 204
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
+ + ++L+ + +++ A +LQIF + H S + + KEG S+F ++++ T +GR
Sbjct: 205 EVLGIQALTLDAVMYINSDALCSLQIFVDEGHAS-IHSDKTKEGLSLFAILDQTRTALGR 263
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILKKFNSPS 277
RLLR W LRP LD+ ++SR +AI F E L+A ++H LK ++IP IL S
Sbjct: 264 RLLRTWLLRPSLDISIISSRHDAIDCFTRPENLVAANTMHNHLKGFRNIPKILTALRSGK 323
Query: 278 FIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
DW + +K + S + + + E+ + S+ D+V K + + ++A
Sbjct: 324 --AKTQDWLSLVKFTFHSAMLRDTLTELSMGGSV---------DVVHKLTAVL--DIASF 370
Query: 337 YELVIGI---IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA-SLELVQLP 392
E+ + ID S G VR +ELD + +Y L L +VA + P
Sbjct: 371 KEVGTAVNETIDWEESTVSGR-VCVRPHIDEELDNRKHVYHGLDAVLSKVAEDISETVSP 429
Query: 393 HLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ V VY Q+GYL+CI EE + ++G+ F FS +++ +
Sbjct: 430 DYASSLNV---VYFPQLGYLICIPLLEEWKTGDGIVVMEGWTFQFS----SESHVYFKSD 482
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
K +LD +GDIY I+D E I + L+ I +F + + A + AELDC L A ++
Sbjct: 483 KMHDLDTHIGDIYTSIVDREIEICQVLLDKILVFEEAISHACDVCAELDCLLCFAEASNA 542
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT--------------RIDND----- 551
Y RP ++ E + I+ GRH LQE VDTF+PND R D D
Sbjct: 543 YGYTRPEMSEENTIMIKQGRHPLQEQVVDTFVPNDAFLVGGAGIGSYPNVRADEDDSSGE 602
Query: 552 -----GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------K 598
I + TG N GKS+Y+KQ ALI F++ IG FVPA++ +G+ D +
Sbjct: 603 VPLLGNSIVVCTGANACGKSVYLKQTALIQFMAQIGCFVPAESVILGIVDKIFTRVQSRE 662
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP 658
++ QS+ MIDL+QV + LR TS+SL LLDEFGKGTL+ DG GL G I +
Sbjct: 663 SVSRAQSALMIDLNQVSLALRNCTSRSLLLLDEFGKGTLSTDGAGLFCGVIKSLLARGAD 722
Query: 659 -PKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPENNSTDV----------------- 699
PKVL TH +L + L P+ + + M VL + +
Sbjct: 723 CPKVLATTHFHDLFRDDLLSPRLLPITYAHMEVLFTTADGEVIIGSDHSDEAEQTGSISR 782
Query: 700 -----EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
E I +LYR+ PG +L S CA + G+P ++++RA YV
Sbjct: 783 RIGHGEKITYLYRVAPGLSLRSQAARCAEIFGIPHDIVERAQYV 826
>gi|408388616|gb|EKJ68296.1| hypothetical protein FPSE_11540 [Fusarium pseudograminearum CS3096]
Length = 915
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 228/732 (31%), Positives = 353/732 (48%), Gaps = 86/732 (11%)
Query: 83 VKSSIFSYEQAWHRLIYLRV-----------TGMDD--------GLSIKERICYLNSM-- 121
SS FS E A RL+ L TGM+D G + E C S+
Sbjct: 142 APSSEFSIETAHERLVGLNSQALSSTGIVFSTGMEDDANEESIPGHPLPES-CAFRSLRY 200
Query: 122 ---MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
++M S V V +G LL + R L + + + SL+ ++ +
Sbjct: 201 GGCINMNSPVSVGCAGALLGDILRRRSAGFLPDGQVAGVLFRVADIRMFSLSSYMYISND 260
Query: 179 AHEALQIFQTDKHPSHMGIG------RAKEGFSVFGMMNKCV-TPMGRRLLRNWFLRPIL 231
+LQI QT+ HP+ G +KE SV+G+ TP GR LR FLRP+L
Sbjct: 261 TLLSLQILQTEMHPNSQAWGSDANQSNSKESLSVYGLFQHLASTPQGRTQLRRIFLRPLL 320
Query: 232 DLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
D+ ++ R +I+ L E + + L TL+ ++++ + I S +F
Sbjct: 321 DINIISERQRSIAVLLQPENADKLPQLTSTLRKIRNLHTTFAQLRK--GIEFPSAGQSFD 378
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLN--FDIV--EKAASCITTE-LAYVYELVIGII 344
K + +H + +LRE + LN D+V ++A I L V ++ I
Sbjct: 379 KGVWGTIHRFTTHAL----TLRELIASLNGGSDVVLFKQAIEGIQPPGLVAVKGMIDKTI 434
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D +SK + + V+ G +LDEL++ Y+ + FL EV + +LP ++ CI
Sbjct: 435 DFEQSKARRRSS-VKVGIDPQLDELKRQYDGMDSFLTEVINHVHRELPDWARKYVQSCI- 492
Query: 405 YIHQIGYLMCIFEEKLD---------DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
++ QIG+L + E D TTLE+ +E F + DG Y REL
Sbjct: 493 FLPQIGFLTVV-EPNPDTGNGLYEGEGTTLEE---WEKLF-NTDGAA---CYKNSYMREL 544
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
D GD+Y +I D E I LVS + + LL A + E D L+LAL A + N+
Sbjct: 545 DEEYGDMYCQIGDREVEIIHGLVSRVLKHEEPLLSASDMCGEFDAILALALGAEKYNWRG 604
Query: 516 PILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-----------DNDGRINIITGPNYSG 564
P + E ++ I+ GRH LQE+ V F+PN + D+ + I+TGPN+SG
Sbjct: 605 PQVVEESVIHIEEGRHPLQELVVPAFVPNSCHLFAGPRRTPEVQDDSPQAIILTGPNHSG 664
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGM 616
KS+Y+KQ A+IV+L+HIGSFVPA A VGLT+S + M+ +S+F D+ Q +
Sbjct: 665 KSVYLKQTAIIVYLAHIGSFVPATQAIVGLTESILTCISPRESMSGGESAFARDMKQAAL 724
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGC 675
++ ++ +S+ L+DEFGKGT +DG LL ++++++ + P++L TH E+
Sbjct: 725 SIKTSSPRSIVLVDEFGKGTNGDDGAALLAALLDHYLSLESDCPRLLAATHFHEVFENNY 784
Query: 676 LPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
L K M+V R E ++ V+D + +L+ L GH SYG CA L GVP V+ R
Sbjct: 785 LAHHSSFKIAHMNV-RLEQEASLVDDQVTYLFNLEYGHNTSSYGGRCAALNGVPGSVVDR 843
Query: 735 AAYVLEAAQNNK 746
A V + N+
Sbjct: 844 AENVSQLLARNE 855
>gi|307108650|gb|EFN56890.1| hypothetical protein CHLNCDRAFT_144556 [Chlorella variabilis]
Length = 958
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 222/387 (57%), Gaps = 35/387 (9%)
Query: 321 IVEKAASCITTELAYVYELVIGIIDVN-RSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
I+ KAA+ I EL + L+ G+ID + + E G+ ++ G ELDELR+ Y LP+F
Sbjct: 441 ILFKAAAVIRQELVLCHNLISGVIDGSPAAAEDGF--IISAGVSPELDELREQYHALPDF 498
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
L + L Q HL IVY+ Q+G+++ + +L E L ++FAF
Sbjct: 499 LTQ-----LGQKGHLWS------IVYLPQVGFVVRVEGGRLGAHLEETLPDYQFAFEGGV 547
Query: 440 GETKRL---FYHTPKTRELDNLLGDIYHKI----LDMERAITRDLVSHICLFSDHLLKAV 492
G + +YHT TR L+ GD+ H+I DME I L++ + ++ + A
Sbjct: 548 GGGEDGPGVYYHTDTTRRLNERFGDMQHRIQAGGADMEAGIACQLIARLAPYAPDIAAAG 607
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID-ND 551
AELDC L LA A N RP LT L I+ GRH+L E VDT+IPN T +
Sbjct: 608 EAVAELDCILGLAEAARHLNLCRPQLTRANELRIEGGRHLLTEQLVDTYIPNSTHMQAGQ 667
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------SKHMTA-E 603
GRI ++TGPN+SGKS Y KQVALI FL+H+GSFVPA +A VGL D S+ A
Sbjct: 668 GRIQVVTGPNFSGKSCYAKQVALITFLAHVGSFVPAASARVGLADRIFTRVASREAAAVP 727
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLV 663
QS+FMIDL Q+ MLR T +SLC++DEFGKGTL DG+GLL T+ +F PP+V++
Sbjct: 728 QSTFMIDLTQIAAMLRLGTERSLCIIDEFGKGTLAADGVGLLCATLRHFAELPCPPRVVL 787
Query: 664 CTHLTELLNEGCLPKSERLKFYTMSVL 690
E+L LP+S +L F TMSVL
Sbjct: 788 -----EVLRPQYLPRSRQLTFLTMSVL 809
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 45/337 (13%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDF--PLIDIVKYQAQPQIIYTSTKS 60
V MA + G R GV+++ QL +E +D++ F L+ + K A+P +IY S+K+
Sbjct: 33 VAMAVAVWGSRCGVAWFADG--QLSCMESEDDTSGPFRHQLLQLAKLHARPAVIYVSSKA 90
Query: 61 EESFLSALKRSDGTTEAPT----------------------VKLVKSSIFSYEQAWHRLI 98
+ L L+ P V+ +S++F A L
Sbjct: 91 DAELLRVLRSPLAGAAPPPPAPSGGTGAAGDHAVAAAGEFDVRTERSTLFLPRAARAMLE 150
Query: 99 YLRVTGMDDGLSIKERICYLNSMMDMGSEVQV---------RASGGLLAVLENERIVDTL 149
+ V G GL+ +ER+ LN+M+ + SE QV A G LA D
Sbjct: 151 AVHVRGTPPGLTPRERLHRLNAMLSLSSEQQVCAAGALLAVLAREGRLAPASAASAADGG 210
Query: 150 EQKESGNAS---------ITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSH-MGIGR 199
E+ + + + + S+ EVSL+ +L +D + ALQIFQ + HP+ MGIG+
Sbjct: 211 EEASAADGGTAGGTAAATMEVASIAEVSLDGYLLVDPASMAALQIFQQEAHPAAAMGIGQ 270
Query: 200 AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHET 259
KEGFSVF +N+CVT GRRLLR WF RPI++L L+ RL+ I FFLC + + L +
Sbjct: 271 PKEGFSVFSTLNRCVTGAGRRLLRLWFRRPIVNLAVLSDRLDGIQFFLCRPDAVKPLQDM 330
Query: 260 LKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
L+ V+D P +L + + +D+ A S+ L
Sbjct: 331 LRKVRDAPRLLARLQGLQTLPDRADFLALQASLAGTL 367
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA----QNNKHVERWSHE 754
E +VFLYRL PG A S+GLHCA +AGVP V+ RA + AA + +H +R +
Sbjct: 868 AEQLVFLYRLEPGRAAPSFGLHCARMAGVPQGVLDRARHASGAAVGPDETGQHAQRAA-- 925
Query: 755 NISAQDQQYKNAVEKMLAFDV 775
Y+ ++++ A +V
Sbjct: 926 -------TYRGLLQRLAALNV 939
>gi|392566514|gb|EIW59690.1| hypothetical protein TRAVEDRAFT_36990 [Trametes versicolor
FP-101664 SS1]
Length = 928
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 236/845 (27%), Positives = 384/845 (45%), Gaps = 150/845 (17%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++ +A RV +YYD R + + E + N F L Q P ++ TS+K++
Sbjct: 66 KICLAASCQSGRVACAYYDPVRRTVFIFEDTPE-NQHFDLTKTFLEQTCPDVVLTSSKAD 124
Query: 62 ESFLSALKR----SDGTTEA------------------------PTVKLVKSSIFSY--- 90
++F+ + S GT + P ++ +S S
Sbjct: 125 DNFMDVCRDHMDGSGGTFQVRPQKDFLPLKGRDRLLSLRLLSELPIMQGSESDNLSELGS 184
Query: 91 ----EQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRAS-GGLLAVLENERI 145
A+ + R G D L L + + S S G LL L R
Sbjct: 185 ASEPRNAYDFMRRRREIGGDPTLQKWNASVRLANFASVESSPLCLGSIGALLDYLARTRA 244
Query: 146 VDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFS 205
V L+ + G + + ++ + L ++++A A +LQIF+ + H S + + KEG S
Sbjct: 245 VAELD--DEGVGGLEVLNIELLPLLDVMQINADALFSLQIFEDENHAS-IHSDKTKEGLS 301
Query: 206 VFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS--LHETLKYV 263
+FG++N T +GR L+R WFLRP + L +N+R +A+ F ++ ++ + +H ++
Sbjct: 302 LFGILNNTKTTLGRALMREWFLRPSMSLAIINARHDAVECFTRADNIITATAMHGHIQGT 361
Query: 264 KDIPHILKKFNSPSFIYTASDWTAFLK-SICSLLHVNKIFEVGISESLREQLRLLNF--- 319
K++P I+ S SDW + +K + +LL LR+ LN+
Sbjct: 362 KNVPRIITTMRSGK--AKVSDWQSIVKFAFHALL-------------LRDSCAELNYAGG 406
Query: 320 -DIVEKAASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
DIV K + ++A EL V ID S VR +ELD L+ IY
Sbjct: 407 VDIVRKLLEVL--DVASFRELGNTVNETIDWEESTNAAR-VCVRPHIDEELDNLKHIYHG 463
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEF 433
+ L +VA+ +P +VY Q+G+L+C+ +E D + L G+ F
Sbjct: 464 IDAVLSKVATQISATVPLDYASSLN--VVYFPQLGFLVCVPMQDEWRGDAGITVLDGWSF 521
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+M +++D +GD++ I+D E I + L + ++ H+ +A +
Sbjct: 522 QSQEM--------------QDMDMHIGDLHPAIVDREIEIVQALQEKVLAYTSHIARACD 567
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----- 548
AELDC LS A + +Y RP +T + ++DI+ GRH LQE+ VDTF+PND +
Sbjct: 568 ICAELDCLLSFAAASRDQDYRRPQMTDQNVIDIKQGRHPLQELVVDTFVPNDAFLLGGSG 627
Query: 549 ----------DNDGR------------INIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+N+ I + TG N GK +ALI +++ + SF+P
Sbjct: 628 IGVETEVHVEENNSEELHEDRHCLKNSIIVCTGANACGK------IALIQYMAQVTSFIP 681
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A++AT+G+ D + ++ QS+FMIDL+QV + LR T++SL +LDEFGKGTL
Sbjct: 682 AESATLGVVDKIFTRIQTRESVSKVQSAFMIDLNQVSLSLRNCTARSLIILDEFGKGTLP 741
Query: 639 EDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPENNS 696
DG GL G + Y + PKV+ TH E+ + L P + F M VL + +
Sbjct: 742 ADGSGLFCGVLKYLLESGTSCPKVIATTHFHEIFHNDLLNPHKLPITFLHMQVLLASSGT 801
Query: 697 ------------TDVED---------IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+D ED I +LY++ G++L S+ + CA + GVP VI RA
Sbjct: 802 NAGVLGEHTLEGSDDEDATRLAPSDKITYLYKVANGYSLHSHAITCAEIFGVPRRVIARA 861
Query: 736 AYVLE 740
Y E
Sbjct: 862 RYASE 866
>gi|46108970|ref|XP_381543.1| hypothetical protein FG01367.1 [Gibberella zeae PH-1]
Length = 1177
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 225/729 (30%), Positives = 353/729 (48%), Gaps = 84/729 (11%)
Query: 85 SSIFSYEQAWHRLIYLRV-----------TGMDD--------GLSIKERICYLNSM---- 121
SS FS E A RL+ L TGM+D G + E C S+
Sbjct: 406 SSEFSIETAHERLVGLNSQALSSTGIVFSTGMEDEANEESIPGHPLPES-CAFRSLRYGG 464
Query: 122 -MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
++M S V V +G LL + R L + + + SL+ ++ +
Sbjct: 465 CINMNSPVSVGCAGALLGDILRRRSAGFLPDGQVAGVLFRVADIRMFSLSSYMYISNDTL 524
Query: 181 EALQIFQTDKHPSHMGIG------RAKEGFSVFGMMNKCV-TPMGRRLLRNWFLRPILDL 233
+LQI QT+ HP+ G +KE SV+G+ TP GR LR FLRP+LD+
Sbjct: 525 LSLQILQTEMHPNSQAWGSDANQSNSKESLSVYGLFQHLASTPQGRTQLRRIFLRPLLDI 584
Query: 234 ENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
++ R +I+ L E + + L TL+ ++++ + I S +F K
Sbjct: 585 NIISERQRSIAVLLQPENADKLPQLASTLRKIRNLHTTFAQLRK--GIEFPSAGQSFDKG 642
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLN--FDIV--EKAASCITTE-LAYVYELVIGIIDV 346
+ +H + +LRE + LN D+V ++A I L V E++ ID
Sbjct: 643 VWGTIHRFTTHAL----TLRELIASLNGGSDVVLFKQAIEDIQPPGLVAVKEMIDKTIDF 698
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+SK + V+ G +LDEL++ Y+ + FL EV + +LP ++ CI ++
Sbjct: 699 EQSKACRRSS-VKAGIDPQLDELKRQYDGMDSFLTEVINHVHRELPDWARKYVQSCI-FL 756
Query: 407 HQIGYLMCIFEE--------KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
QIG+L + + + TTLE+ +E F + DG Y RELD
Sbjct: 757 PQIGFLTVVGPNPDTGDGLYEGEGTTLEE---WEKVF-NTDGAA---CYKNSYMRELDEE 809
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GD+Y +I D E I LV+ + + LL A + E D L+LAL A + N+ P +
Sbjct: 810 YGDMYCQIGDREVEIIHGLVNKVLKHEEPLLSASDMCGEFDAILALALGAEKYNWRGPQV 869
Query: 519 TLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-----------DNDGRINIITGPNYSGKSI 567
E ++ I+ GRH LQE+ V F+PN + D+ + I+TGPN+SGKS+
Sbjct: 870 VEESVIHIEEGRHPLQELVVPAFVPNSCHLFAGPRRTPEVQDDSPQAIILTGPNHSGKSV 929
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLR 619
Y+KQ A+IV+L+HIGSFVPA A +GLT+S + M+ +S+F D+ Q + ++
Sbjct: 930 YLKQTAIIVYLAHIGSFVPATHAIIGLTESILTCISPRESMSGGESAFARDMKQAALSIK 989
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPK 678
++ +S+ L+DEFGKGT +DG LL ++++++ P++L TH E+ L
Sbjct: 990 TSSPRSIVLVDEFGKGTNGDDGAALLAALLDHYLSLKSDCPRLLAATHFHEVFENNYLAH 1049
Query: 679 SERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
K M+V R E ++ V+D + +L+ L GH SYG CA L GVP+ V+ RA
Sbjct: 1050 HISFKIAHMNV-RLEQEASLVDDQVTYLFNLEYGHNTSSYGGRCAALNGVPSLVVDRAET 1108
Query: 738 VLEAAQNNK 746
V + N+
Sbjct: 1109 VSQLLARNE 1117
>gi|392865959|gb|EAS31814.2| DNA mismatch repair protein Msh5 [Coccidioides immitis RS]
Length = 987
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 208/725 (28%), Positives = 358/725 (49%), Gaps = 66/725 (9%)
Query: 59 KSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE-RICY 117
+S ++ L++LK G+ + P LV + FS+E A D G + ++ + Y
Sbjct: 184 ESAKTKLTSLKLRQGSADIPKF-LVPGNAFSHENAED--------AEDVGFTSQQGELLY 234
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L ++DM + V V +G L+A L+ +R + +G+ + ID + SL + ++
Sbjct: 235 LAGIVDMENHVSVGCAGALIAYLQRKRSTQDFQGDSAGDQLLRIDKIEMSSLKSNMFINR 294
Query: 178 TAHEALQIFQTDKHPSHMGIGRAK------EGFSVFGMMNK-CVTPMGRRLLRNWFLRPI 230
+LQI Q++ HP+ G + E S++G+ ++ T G+ +LR FLRP
Sbjct: 295 DTLSSLQIIQSESHPNAFNQGPGQTSSSSKESLSIYGLFHRFARTSQGKTMLRQIFLRPT 354
Query: 231 LDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
+ ++ R + IS FL E + +A L ++LK + ++ ++ I T +
Sbjct: 355 IHQSIISERHDFISTFLRVENADAVAKLTKSLKGINNLRPVMIHLQKG--ISTGNARFRG 412
Query: 289 LKSICSLLHVNKIFE-VGISESLREQLRLLNFDIVEKAASCIT-TELAYVYELVIGIIDV 346
KS+ + F + I E+L++ ++ KA + +L V ++ +D+
Sbjct: 413 FKSVVWATILEFAFHTIDIHETLKKIAGAEKLNLCVKAMHKLELAKLHQVGRVIYETVDL 472
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH-LCKEMFVPCIVY 405
S ++ + T+VR G ELD+++++Y + L +VA+ LP L E+ V +Y
Sbjct: 473 ESSVQE-HRTIVRPGVDQELDKMKEMYNGMESLLSDVAATIAATLPEELSNELNV---IY 528
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
Q+G+ + I LD+ G + ++ + R ++ + E+D LGD+Y
Sbjct: 529 FPQLGFNIAI---PLDEHGRPMYDGGDEEWAQVFTTENRAYFKDFRMHEMDERLGDMYGN 585
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
I E I DL I + + L++A + E+D L+LA A +RP +T E ++
Sbjct: 586 ICAKEIEIVYDLAQSILGYEEILVEASDVCGEIDSLLALAHGADLYKLVRPQMTDENVVI 645
Query: 526 IQNGRHVLQEMTVDTFIPNDT------------------RIDNDGRIN--------IITG 559
I+ GRH+L E V +++ NDT + D + + ++TG
Sbjct: 646 IKGGRHILHEAAVSSYVANDTFLVGGKGTERYQSPTDDPKYSGDSQASDCTGPSMLLLTG 705
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDL 611
PNYSGKS+Y+KQVALI++++HIGSFVPA AT+G+TD + ++ QS+F IDL
Sbjct: 706 PNYSGKSVYLKQVALIIYMAHIGSFVPAKTATIGVTDKILTRITSRETVSKTQSTFAIDL 765
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTEL 670
Q+ + +T++SL ++DEFGKGT + DG+GL YF+ D PKV+ TH E+
Sbjct: 766 QQISFAVANSTNRSLIIIDEFGKGTESADGVGLACALFEYFLDLGDERPKVIGATHFHEI 825
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
L LP+ L+ M V S + I +LY G + S+G CA + G+
Sbjct: 826 LENEFLPQRPELQLGHMEVQVDPAASELQDQITYLYNFRFGRSSESFGTICAAMNGIDLA 885
Query: 731 VIKRA 735
++ RA
Sbjct: 886 IVSRA 890
>gi|156838833|ref|XP_001643115.1| hypothetical protein Kpol_461p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113709|gb|EDO15257.1| hypothetical protein Kpol_461p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 892
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 320/639 (50%), Gaps = 94/639 (14%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY- 262
FS+F ++N+ + ++LLR+W + P+ D + + +R N + F+ ++ A E L +
Sbjct: 252 FSLFEILNQTCSQPAKQLLRSWLVTPLSDKDQIEARFNIVDTFI--SKVNAITFENLCFH 309
Query: 263 ---VKDIPHILKKF--NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
D+ ++ KF N PS+I W +N GI + L LL
Sbjct: 310 ITKCPDVSNVFNKFISNGPSYIA----WR----------RINDFLLNGIE--IHHCLTLL 353
Query: 318 NF-----DIVEKAASCITT-ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQ 371
N DI+E I+T +L + + +ID S+E ++REG D+LDE RQ
Sbjct: 354 NHETRTQDIIETTKKTISTSDLKNLVREINSVIDFELSQESK-NLVIREGIDDKLDECRQ 412
Query: 372 IYEELPEFLE------EVASLELVQL----PHLCKEMFVPCIVYIHQIGYLMCI---FEE 418
+Y +L + L EV+ E++ P L K+ + + YI Q+GYL+ + FE
Sbjct: 413 VYRQLEDILNSLANEVEVSIFEVISQGEFNPDLSKDNLINAL-YIPQLGYLITLDNSFEG 471
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
+D + L F + ++ +++ +++ LD GDIY I D+E I L
Sbjct: 472 YIDCSEL-------FGWKEVFRTPTNIYFKDERSKRLDEEFGDIYGNISDLEIDILLKLQ 524
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEPLLDIQNGRHVLQEMT 537
+ + + ELD S A V+ + +Y+RP I+ ++DI+ GRH + E
Sbjct: 525 ERVFENATLIQNFNKLIIELDVLSSFARVSIEKSYIRPTIIKDRSIIDIKGGRHPIYETL 584
Query: 538 VDTFIPNDTRID--------------NDG------RINIITGPNYSGKSIYIKQVALIVF 577
V+T+IPND +D ND RI IITG N SGKS+++ QVALIV+
Sbjct: 585 VETYIPNDISLDGGELNNLVSTNNLGNDWITGKKERIAIITGANASGKSVFLTQVALIVY 644
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
LSHIG FVPA++A +G+TD + ++ + SSF +D QV + AT +SL LL
Sbjct: 645 LSHIGCFVPAESAVIGITDKILSKIQMKESVSNQHSSFELDSRQVAKCIVLATERSLILL 704
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCL-PKSERLKFYTMS 688
DEFGKGT DG L G + P+VL C+H EL + + P+S +KFY+
Sbjct: 705 DEFGKGTDINDGPALFGACLKNLAQQKHCPRVLACSHFHELFKDHIISPRSHGIKFYSTE 764
Query: 689 VL--RPEN-------NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+L R N N + E I FLY+L G A S+G++CA +AG+ +++KRA +
Sbjct: 765 ILLNRSNNKLTPNVENFQENEGITFLYKLKEGIANQSFGIYCASVAGIDNDIVKRAYKIK 824
Query: 740 EAAQNNKHVERWSHENISAQDQQY---KNAVEKMLAFDV 775
E N ++ + E + QQ+ +N V+K +++D+
Sbjct: 825 EMMDNGYNLVDYCGEITKKELQQFQKNQNIVKKFISWDL 863
>gi|302925236|ref|XP_003054058.1| hypothetical protein NECHADRAFT_714 [Nectria haematococca mpVI
77-13-4]
gi|256734999|gb|EEU48345.1| hypothetical protein NECHADRAFT_714 [Nectria haematococca mpVI
77-13-4]
Length = 794
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 225/804 (27%), Positives = 381/804 (47%), Gaps = 80/804 (9%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPL--IDIVK---YQAQPQIIYTSTKSEESF---L 65
+G +Y+ ++ LH+ E D P+ +D+ + + +P + S ++ E F
Sbjct: 15 MGCAYFSTTDGVLHLSE-------DIPMATLDVAEQFLFHVEPTTVLISARAPEEFQQYF 67
Query: 66 SALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMG 125
S D + L + I Y + + G+D + R ++M
Sbjct: 68 SPESARDRLISLQSDSLSPTGII-YSTGASDDLSRTIAGLDQPEAPAFRSLRCGGCLNMS 126
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
++V + +G +L L+ R L + + SL+ ++ + A A ALQI
Sbjct: 127 NQVSIGCAGAVLGDLQRRRSAGFLPDGQVSGVLFRVLDARMFSLSSYMFVSADALLALQI 186
Query: 186 FQTDKHPSHMGIG------RAKEGFSVFGMM-NKCVTPMGRRLLRNWFLRPILDLENLNS 238
QT+ HP+ G +KE SV+G+ + TP GR LR FLRP+LDL +
Sbjct: 187 VQTELHPNSQAWGPNLSKSGSKESLSVYGLFYHLACTPQGRTQLRQLFLRPVLDLGLIRE 246
Query: 239 RLNAISFFL--CSEELMASLHETLKYVKDI-PHILKKFNSPSFIYTASDWTAFLKSICSL 295
R IS L + E+MA + L+ ++++ P + F+ T +F K + +
Sbjct: 247 RQTTISVLLQPSNAEMMAHMTSILRRIRNLRPALTLLKKGIEFLSTGQ---SFNKGVWAT 303
Query: 296 LHVNKIFEVGISESLREQLRLLNFD-----IVEKAASCITTELAYVYELVIGIIDVNRSK 350
+ + G++ LRE L LN E S L V +++ ID ++K
Sbjct: 304 --IQQFTTQGLA--LREVLGNLNSGTELALFRELVNSLHPAVLMAVGDMIDKTIDFQQTK 359
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
+ + V++G +LDEL++ Y L L E +P C+ ++ Q+G
Sbjct: 360 IRQRSS-VKQGADLQLDELQRSYAGLNHILLETKDRMKAAIPEWAHRHVNSCL-FLPQLG 417
Query: 411 YLMCIFEEKLDDTTLEQLQG-----FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
++ + + +++ + +G +E F+ G + Y ELD GD++
Sbjct: 418 FVTSVEVGPVTGSSMYEGEGMPEGGWEKVFTGEMGACYKNTYMC----ELDQEYGDLH-- 471
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
E + L + I + L+ A + E D +LAL A + N+ P + + ++
Sbjct: 472 ----EVEVIHGLANRILEHEEVLISASDMCGEFDAIHALALGAEKYNWRAPTVVDDNVIH 527
Query: 526 IQNGRHVLQEMTVDTFIPNDTRIDNDGRIN------------IITGPNYSGKSIYIKQVA 573
IQ GRH LQE+ V F+PND + + G I+ I+TGPN+SGKS+Y+KQVA
Sbjct: 528 IQGGRHPLQELVVPAFVPNDCHLAS-GPIDQAHLEEASSQALILTGPNHSGKSVYLKQVA 586
Query: 574 LIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+IV+L+HIGSFVPA AT+GLTD + M+ +S+F D+ Q + R +TS+S
Sbjct: 587 IIVYLAHIGSFVPASQATIGLTDKILTCMSPRESMSGGESAFARDMKQAALSTRTSTSRS 646
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSE-RLK 683
L L+DEFGKGT +DG GLL +++F++ + P++LV TH E+ G L + E +
Sbjct: 647 LVLVDEFGKGTNGDDGSGLLAALLDHFLSLNRDCPRLLVATHFHEIFEGGYLSRHEGGFR 706
Query: 684 FYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
M V R + ++ ED + +L+ L GH+ S+G CA L GVP+ V++RA + +
Sbjct: 707 LAHMDV-RVDWDAAQTEDQVTYLFTLAFGHSTSSFGGRCAALNGVPSAVVERAEGIAKLL 765
Query: 743 QNNKHVERWSHENISAQDQQYKNA 766
N+ + A+++Q + A
Sbjct: 766 AQNEDLGELCARLSQAEEEQLEKA 789
>gi|296425443|ref|XP_002842251.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638512|emb|CAZ86442.1| unnamed protein product [Tuber melanosporum]
Length = 781
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 193/638 (30%), Positives = 316/638 (49%), Gaps = 101/638 (15%)
Query: 88 FSYEQAWHRLIYLRVTGMDDGLSI-----------------KERICYLNSMMDMGSEVQV 130
FSYE A ++LI +++ G DG + + + L +++ S + V
Sbjct: 138 FSYEAARNKLISIKI-GQADGPILTLQTPGDIHDITTDQKRRGNLLRLAGWVNVDSRISV 196
Query: 131 RASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDK 190
SG +L L+ ++ +L + +++ ++ S+N + ++A ALQIF+ +
Sbjct: 197 GCSGAVLTYLQRKQAATSLTDR-----VVSVANLEMWSMNNTMFVNADTMCALQIFEDES 251
Query: 191 HPSHM---GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL 247
HP+ + GR KEG S+FG+MN +P+G +L+ WFLRP L +E +N R ++IS FL
Sbjct: 252 HPNFLMQGPHGRGKEGLSLFGIMNLTRSPLGHTMLKQWFLRPSLSIEAINERQDSISAFL 311
Query: 248 CSE--ELMASLHETLKYVKDIPHILKKF-NSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ + + ++++ +K+IP IL P + +W+A L+ C + +
Sbjct: 312 RPDVSHMTQVIGKSIRKIKNIPKILAGLRKGPGREGRSGEWSA-LQQFC-------FYAL 363
Query: 305 GISESLREQLRLLNFDIVEKAASCITT-ELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
I L E + I++K A L V +++ ID S + +++
Sbjct: 364 KIKTCLEEMSGIGGLQIIKKVAENFNVPSLQEVGQMITETIDFEESVAL-HRVVIQRNID 422
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT 423
+ELDE++++Y+ L + L VA +P +++ QIGYL+ I + +T
Sbjct: 423 EELDEMKRLYDGLGDMLGTVARDIARDMPLDVATSL--NVIFFPQIGYLIVIPAQGTGNT 480
Query: 424 TLEQL-----------QGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
T L +G++ F ET +Y P+ R+LD+ GD+Y ++ D E
Sbjct: 481 THGLLNDPSGGPAYAQEGWDLQFCT---ETN-WYYKNPQMRDLDDYFGDLYGRVCDREIE 536
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHV 532
+ + + L AELDC L++A A + + P++ + +++I+ GRH
Sbjct: 537 LVHAMKCRVLQHDVALASCAMVCAELDCLLAMAEAAERYKFTCPVIVTDNVINIKGGRHP 596
Query: 533 LQEMTVDTFIPNDTRI---------------DNDG-------RINI-------------I 557
LQE+ V +I NDT + DN G R +I +
Sbjct: 597 LQELCVSAYIENDTLVAGGEGTLGEVVVEAPDNGGPRSAERSRADISNGDGENAPSMMLL 656
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-------QSSF 607
TGPNYSGKS+Y+KQVALIV+++HIGSFVPA A +GLTD ++ T E QS+F
Sbjct: 657 TGPNYSGKSVYLKQVALIVYMAHIGSFVPARGAVIGLTDKILTRIQTREMLISLKTQSAF 716
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
MIDL Q+ LR AT +SL ++DEFGKGT + DG GLL
Sbjct: 717 MIDLQQISSSLRLATRRSLLIIDEFGKGTDSSDGAGLL 754
>gi|134076974|emb|CAK45383.1| unnamed protein product [Aspergillus niger]
Length = 881
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 210/716 (29%), Positives = 351/716 (49%), Gaps = 99/716 (13%)
Query: 85 SSIFSYEQAWHRLIYLRVT--------------GMDDG---------LSIKE-RICYLNS 120
S F++ A +RLI L ++ G+ DG L+++E ++ +
Sbjct: 131 SQEFNFSNAKNRLIALDLSSRHEHRIKFLVPHSGLVDGEQMDAENLDLTLQEGKLLNVYG 190
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
+DM + V + +G +LA L+ R ++ E + + SV +L + ++
Sbjct: 191 SVDMENTVTIGCAGVILAYLQRRRASMSI-SNERALGILRVSSVEMFALTGTMFVNGRTL 249
Query: 181 EALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDL 233
+LQI +++ HPS + G GR +KEG SV+G+ + TP GR L+ FLRP ++L
Sbjct: 250 FSLQIMESESHPSMVNHGPGRKSTSSKEGLSVYGLFQRFACTPQGRNQLKQMFLRPSVEL 309
Query: 234 ENLNSRLNAISFFLCSEEL--MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ +N R + I +L ++ + + LK++K++ +++ N I T S K+
Sbjct: 310 DVINERNSFIGVYLRTDNFNPFDKMVKGLKHIKNLHYVM--INLRKGISTGSGKIMGFKA 367
Query: 292 I--CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+LL + FE QL + I E +D++ S
Sbjct: 368 TVWATLLAALRAFEAA-------QLYKVGRMIQETK------------------VDIDSS 402
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+E+G T+V+ G +LD ++ Y+ L L++VA +E+ ++ V +VY Q+
Sbjct: 403 EEQGR-TVVKPGIDRDLDRIKDRYDGLNSLLKQVA-IEIATTIPESYDIDV-NVVYFPQL 459
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
G+ + I L++ +G E + M R + + RE+D+ LGDIY I +
Sbjct: 460 GFNIAI---PLNNARDAAYRGAENEWELMFFTENRAYLKDFRMREMDDKLGDIYGIICER 516
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I DL + + + LL+A + ++D L++A A +RP + E ++ I+ G
Sbjct: 517 EIEIVYDLAQRVLQYEEVLLEASDICGQIDSLLAMAHAASSYKLVRPKMVQEDVIKIKGG 576
Query: 530 RHVLQEMTVDTFIPNDTRI----------------------DNDGRINIITGPNYSGKSI 567
RH+LQE+TV +++PNDT + D + + ++TGPNYSGKS+
Sbjct: 577 RHILQELTVSSYVPNDTYLIGRRTQRESVEPICTTLKPYENDCEPSMLLLTGPNYSGKSV 636
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS---KHMTAE-----QSSFMIDLHQVGMMLR 619
Y+KQVALI++L+ +GSFVPA++A +G+ D K T + QS+FM DL Q+ L+
Sbjct: 637 YMKQVALIIYLAQVGSFVPAESAELGIIDKILVKSNTQDSVSQIQSTFMNDLQQLSFDLK 696
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
Q T SL L+DEFGKGT DGIGL G + + + PKV+ TH E+L G L
Sbjct: 697 QVTGHSLLLIDEFGKGTNEYDGIGLACGVLENLLNREDAPKVIAATHFHEILANGYLKPR 756
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+L+ M V E + I +LY G + S+G CA + G+ ++ RA
Sbjct: 757 PQLQLGHMEVRVHEEPGEAEDQITYLYNFRLGRSDQSFGTICAAMNGISQTIVDRA 812
>gi|367020408|ref|XP_003659489.1| hypothetical protein MYCTH_99556 [Myceliophthora thermophila ATCC
42464]
gi|347006756|gb|AEO54244.1| hypothetical protein MYCTH_99556 [Myceliophthora thermophila ATCC
42464]
Length = 852
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 237/807 (29%), Positives = 366/807 (45%), Gaps = 113/807 (14%)
Query: 13 RVGVSYYDSSIRQLHVLEVWED-SNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
RVG +YY ++ Q VLE ED S +D + Q QP I ++ + L+R
Sbjct: 10 RVGCAYY-IAMDQTLVLE--EDVSMGGVATVDTLLLQVQPTSIIIPNRAPGDLIEFLERD 66
Query: 72 D----------GTTEAPTVKLVKSSIFSYEQAWHRL------------IYLRVTGMDD-- 107
G A ++ + S+ F YE L I + G +
Sbjct: 67 AHRFDNNENWFGGQGAYVLRYISSAQFDYEAGKEALAKADPRPAKPDPIAILAVGEEPVQ 126
Query: 108 --GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVI 165
G + ++ + + S + V +G +L LE R + L E + + V
Sbjct: 127 SLGSAAHNKLMRVGEKISFESYLSVGCAGAVLTDLERRRRAEGLSSDEEEDMAFLF-CVK 185
Query: 166 EVSLNKF---LKLDATAHEALQIFQTDKHP------SHMGIGRAKEGFSVFGMMNKCVT- 215
++ +N L + + +LQI Q++ HP S+ +AKE SV G++ +
Sbjct: 186 DIRMNTATDTLLVSGDSLVSLQILQSELHPNVQARFSNSSEPKAKEALSVTGLLQALASS 245
Query: 216 PMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNS 275
G+R LR LRP D+ + R +I L E + K++ +L+K +
Sbjct: 246 AQGKRRLRQIILRPTTDIRLIQERHRSIEVLLRPE--------NQEIAKNMRMLLRKVKN 297
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN----FDIVEKAASCI-T 330
+ LLHV K F + +S L+ + L D+ +K + +
Sbjct: 298 AKTL---------------LLHVKKGFAM-VSTQLKRAVHALKGVSEVDVFDKIRNEVDV 341
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ 390
Y+ ++++ ID SKE G+ + G + LD LR+ + + L E+ + +
Sbjct: 342 NRFLYLGDIIMRTIDFRLSKESGHAE-IHAGASEYLDGLRREFANVCHILPELKDSVVRE 400
Query: 391 LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF---- 446
P C V + QIG+L+ +LD T E G +D D E F
Sbjct: 401 TPREAARFIRHCTV-MPQIGFLVAT---ELDPETGE---GAYHGQNDPDSEWVMCFVSED 453
Query: 447 ---YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
Y +LD+ GD+ +I D E + L + + +L A + AELD L+
Sbjct: 454 MGYYKNRLMLDLDSQYGDLLSRIADEEIEVMMALATEVMEHEGAILHASDLFAELDSMLA 513
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID----------NDGR 553
LAL A + N+ P +T ++DI GRH LQE+ V ++IPNDT + N GR
Sbjct: 514 LALAAEKYNWTAPTMTTSNVIDITGGRHPLQELLVPSYIPNDTTVAGGCGTGGIAINGGR 573
Query: 554 IN------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKH 599
+ I+TGPN SGKS+Y++QVALIV+L+H GS+VPA AT+G+TD +
Sbjct: 574 MELAPSMLILTGPNNSGKSVYMRQVALIVYLAHTGSYVPATCATIGVTDRILTRIATRET 633
Query: 600 MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-P 658
+ ++S+F++DL Q + AT +SL L+DEFGKGT E G LL + YF+
Sbjct: 634 VVDDESAFLVDLKQAAFSMNFATRRSLLLIDEFGKGTTAESGSALLAAYLTYFLDLGTES 693
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSV-LRPENNSTDVEDIVFLYRLVPGHALLSY 717
PKVL TH E+ + L + + F M L PE + E I FLYRLVPG S
Sbjct: 694 PKVLAGTHFHEVFDNEFLRSGKNIAFAHMDARLDPEAEDLE-EQITFLYRLVPGRGPSSL 752
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQN 744
G+ CA ++ VP+ +I+RA L A QN
Sbjct: 753 GVMCAAVSDVPSNIIRRAE-ALVALQN 778
>gi|303282559|ref|XP_003060571.1| MutS 5 [Micromonas pusilla CCMP1545]
gi|226458042|gb|EEH55340.1| MutS 5 [Micromonas pusilla CCMP1545]
Length = 830
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 221/397 (55%), Gaps = 36/397 (9%)
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP---CIVYIHQIGYLM 413
+V G C ELD+ ++Y LP+ L VA+ E ++P + V +VY+ ++GY +
Sbjct: 375 VVHPGVCRELDDAMRLYHGLPDLLSRVAAAEASRVPSFLRGRGVEDNLHVVYLPRVGYAV 434
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGE--TKRLFYHT---PKTRELDNLLGDIYHKILD 468
I L ++L+ FEFAF D + T +Y T P T+ELD LGD+ ++ D
Sbjct: 435 RIDGSTLPPDIADELRDFEFAFDDENATEGTYHAYYFTKARPTTKELDVELGDVLSRVSD 494
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E A+ RDL + + + A AE+DC LSL+ A RP LT E L I
Sbjct: 495 LEAAVLRDLRRRVLSSAPSIRDASRCVAEVDCLLSLSRAAVAFGLRRPALTNESRLSIVG 554
Query: 529 GRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
GRH+LQE N GR+ ++TGP SGKS+YIK +A+I FL+H+GSFVPA+
Sbjct: 555 GRHLLQEAA------------NGGRVTVVTGPTMSGKSVYIKSIAIIAFLAHVGSFVPAE 602
Query: 589 AATVGLTD----------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
+A VG+ D S QSSF DL Q+ +M+ AT +SLC++DEFGKGT T
Sbjct: 603 SAVVGVVDRIFTRVMSHDSIAQRVGQSSFARDLSQISLMINNATPRSLCIVDEFGKGTKT 662
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+GLLGG + PP V TH +++ ++ +P++ + + TMSV +++
Sbjct: 663 ADGVGLLGGFLRAVSEIPEPPIVFAATHFSDVTDDAFVPRNANMNYLTMSVY-----ASE 717
Query: 699 VE-DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
VE +I FLY+ VPG + +Y CA AG+P V++R
Sbjct: 718 VENEITFLYKAVPGVSTRAYSARCAREAGLPRVVLER 754
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 37/210 (17%)
Query: 127 EVQVRASGGLLAVLENERIV----------------------DTLEQKESGNASITID-- 162
E QVRA+G LL VL + ++ + G + + D
Sbjct: 228 ERQVRAAGALLGVLRRDGVILNGDGDGADPGGGGGGGGGGGGGGITVVARGKSWVVGDHA 287
Query: 163 -----SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPM 217
++ E+S +L++D + AL +F + HPS +G AKE + VF ++N CVTP
Sbjct: 288 PSDPIALRELSTRAYLRVDDVSQAALGLFTPESHPSRF-VGCAKE-WGVFALLNDCVTPP 345
Query: 218 GRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPS 277
G+RLLR WF RP+L+ + + RL+AI F+ + L + ++ +P +L + +
Sbjct: 346 GKRLLRAWFQRPLLNRDVIEERLDAIEHFVVHPGVCRELDDAMRLYHGLPDLLSRVAA-- 403
Query: 278 FIYTASDWTAFL--KSICSLLHVNKIFEVG 305
AS +FL + + LHV + VG
Sbjct: 404 --AEASRVPSFLRGRGVEDNLHVVYLPRVG 431
>gi|324506626|gb|ADY42827.1| MutS protein 5, partial [Ascaris suum]
Length = 769
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 319/627 (50%), Gaps = 57/627 (9%)
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHE 181
+D+ S VRA G LL L+ R+ E N I + ++ L++ T
Sbjct: 180 IDITSTCMVRAFGALLKYLDAVRLGVEFEDY---NVKTPIIRIKTFTIEHMLEMHETTFS 236
Query: 182 ALQIFQTDKHPSHMGIGR---AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
AL IFQ HPS +EG S+F M N+C + G+ LLR WF RP +D + L +
Sbjct: 237 ALCIFQKQAHPSASTASTSQSGREGISLFRMCNRCCSRPGKVLLRRWFERPTMDCDVLKN 296
Query: 239 RLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
RLNA+ FF+ C+ + + LK + ILK+ T +DW L
Sbjct: 297 RLNAVEFFVQECNLDAANFARKRLKRICSPKGILKRAQGGQL--TVNDWRK--------L 346
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
++ + ISE ++ LR L FD++ CI ++ + ++ I++ + +
Sbjct: 347 YLTCRSAIEISEYIK--LRELKFDLLTDDLKCIDEDVVRLAAVIAEIVNFEEADAENR-F 403
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMC 414
+V +G LDEL+ Y +LP L VA+ E L+ L +C +VYI +GYL+
Sbjct: 404 VVNQGVDHHLDELKDTYSKLPITLAAVATEEAKLMNL-EMCS------VVYIPMLGYLLV 456
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+ E +Q + ++DG + R LD +GDI +I D+E
Sbjct: 457 LGTEV---NMPKQAEDKVEMIYEVDGVRH---MKNARMRALDASIGDIKMEIYDIETTAM 510
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQ 534
L S +C LL V+ A LDC +SLA A + N+ RP L E ++D+ + RH +
Sbjct: 511 LRLQSMVCQRRSALLMMVHACAALDCVISLAQAAREYNWCRPQLIAESVIDVDSSRHPIS 570
Query: 535 EMTVDT-FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
E+ ++ F+ N R ++ +++GPN SGKS+Y+KQVAL+V+++HIGSFVPA+ A +
Sbjct: 571 ELLSNSRFVANPIRSGGAQSKVKVLSGPNASGKSVYLKQVALVVYMAHIGSFVPAEHAII 630
Query: 593 GLTD---SKHMTAEQ-----SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
G D ++ +A++ S+F DL Q+G+ LR+ T SL +LDEFGKGT+T+ G+ L
Sbjct: 631 GPIDRIVTRTYSADKVLDGMSTFAKDLAQMGVALRRGTCNSLIILDEFGKGTMTDVGLSL 690
Query: 645 LGGTINYFVTC--DVPPKVLVCTHLTELLNEGCLPK-SERLKFYTMSVLRPENNSTDVED 701
L ++N++++ + P + V +H L++ L K +E L F+TM V+ + E
Sbjct: 691 LAASLNFWISNGKEKCPHIFVSSHFHSLVSH--LQKDAEMLSFHTMEVI------SRGER 742
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVP 728
+ + Y LV G S+ + A G+P
Sbjct: 743 LEYRYELVDGLIDCSFAAYTAAQVGLP 769
>gi|440467752|gb|ELQ36951.1| mismatch repair protein 5 [Magnaporthe oryzae Y34]
gi|440478377|gb|ELQ59217.1| mismatch repair protein 5 [Magnaporthe oryzae P131]
Length = 1014
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 216/790 (27%), Positives = 357/790 (45%), Gaps = 115/790 (14%)
Query: 31 VWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS----DGTTEAPTVKL---V 83
+ +D+ + LI+ + QP + ++ + ++ L+R G EA +
Sbjct: 156 IQQDTMAGIELIETILLHVQPTKVIVPNRASDELVTYLERRAHNIQGNNEASGAYVFHST 215
Query: 84 KSSIFSYEQAWHRLIYLR---------VTGMDDGLSIKERIC-----------YLNSMMD 123
SS F+++ A +L L+ V M +++ I L S+++
Sbjct: 216 GSSEFNHQTAIEKLTKLKLNCYSHPSLVMNMAGDSALEADISGSAFGSNQGNLRLGSLIN 275
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
+ S + + +G +L+ L+ R + L + + +A+ I ++ L + L+ +AL
Sbjct: 276 LSSRLSIGCAGAILSELQRRRASECLYRDQDVSAAHAIRTITMFDLANSMFLNDDTLDAL 335
Query: 184 QIFQTDKHPSHMGIGR------AKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENL 236
QI +++ HP G AKE SV+G+ + TP G+ L+ FLRP D+ L
Sbjct: 336 QILRSESHPDSQKGGPDKSSSGAKESLSVYGLFQRHARTPQGKAKLKQTFLRPSTDMGLL 395
Query: 237 NSRLNAISFFLCSE--ELMASLHETLKYVKDI----PHILKKFNSPSFIYTASD--WTA- 287
R I+ L E E + + L+ +K++ HI + + PS + A W +
Sbjct: 396 GERHRIIAILLRPENSETFTMIIKHLRMIKNMKAIMSHIQRGVDKPSSLAPAKRGVWKSL 455
Query: 288 --FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
F K L ++ E G + L ++N A ++ V ++V ID
Sbjct: 456 QRFSKFTVELYETVRVLETGGAP-----LEVVN----RMQAQVDPRQIMQVGKVVSDTID 506
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
+ + E T++ G ++LD+L + Y P L+E A + +P CI Y
Sbjct: 507 FD-ATETINDTVILPGVSEDLDQLTRTYNGFPSLLQETARHIVRDVPEWAAAYIEHCIYY 565
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH-------TPKTRELDNL 458
HQ+G+L I + + G E D + +R+F H + +ELD+
Sbjct: 566 -HQLGFLTVISANANGEPNYD---GPEPGAGD---DWERIFVHEGNFYFKNRRMKELDDY 618
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDI +I + + + +C L ELD +LA VA Q N P +
Sbjct: 619 FGDIVAQIHGEQPSTS------LCCRKSSL-------GELDSLTALAAVAQQYNLTAPEM 665
Query: 519 TLEPLLDIQNGRHVLQEMTVDTFIPND-----------------------TRIDNDGRIN 555
T +L+I+NGRH+LQE+ V F+PND + + +
Sbjct: 666 TESNVLEIKNGRHLLQELVVSAFVPNDCLLCGGNGSESESAGSSTSELSHSEGEKTPSML 725
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
I+TGPN+SGKS+Y+KQVALIV+L+H+GSFVPA+ A +G D + +S+F
Sbjct: 726 ILTGPNHSGKSVYLKQVALIVYLAHVGSFVPAEWARIGTVDRILTRVSTRESAARPESAF 785
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC--DVPPKVLVCT 665
ID+ Q + AT +SL L+DEFGKGT DG L F +V PKVL T
Sbjct: 786 AIDMRQAAFSINLATRRSLVLIDEFGKGTSPVDGAALAAALFTQFAEAGENVRPKVLAAT 845
Query: 666 HLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
H E+ + L +S + F M + N + + FLY +VPG ++ S+G +CALL
Sbjct: 846 HFHEIFEQELLAQSPTVGFAHMEINVDYNTQYLEDQVTFLYTMVPGRSISSFGTNCALLN 905
Query: 726 GVPAEVIKRA 735
G+ +++ RA
Sbjct: 906 GIDDKIVARA 915
>gi|429863638|gb|ELA38061.1| DNA mismatch repair protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 1004
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 316/625 (50%), Gaps = 41/625 (6%)
Query: 155 GNAS-----ITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRA------KEG 203
GNA+ + + S+ +L+ + + +LQ+FQ++ HP+ + G A KE
Sbjct: 335 GNAADGLLRVPVASIQMFALSDSMLVTDETISSLQVFQSELHPNRLMSGSATAGSCSKES 394
Query: 204 FSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETL 260
SV+G+ + TP G+ LR FLRP L+L+ + R ++ L S+ E + S+ L
Sbjct: 395 LSVYGLFHPFASTPQGKVKLRQMFLRPSLNLDTIRERQKTVTVLLQSDNAEALESVCGAL 454
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K ++D+ L++ + I T A + + L I + + +++ +
Sbjct: 455 KKIQDVRRPLEQLRRGADIPTGK---AIGRGVWWSLTRFSIAVLQLQDAMLQLQHTHGLA 511
Query: 321 IVEKAASCITTE-LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
V++ S I+ + V E V IID + K V+ +LD+L+ Y+ L
Sbjct: 512 GVQQVLSIISARVIKGVAEKVDSIIDFDEVKASSR-IAVKPHVNVQLDKLKHDYQGLDSL 570
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
L+++ +LP + C V+ Q+G+ + + + ++ + M
Sbjct: 571 LDDICKSMSQELPEWARPYVTGC-VFWPQLGFFTVVSLRQDGTPAYMGQELYDDRWEVMF 629
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
+++ + ELD LGD Y I+D+E I DL + + L A + + D
Sbjct: 630 ITGGSVYFKNRRMAELDAQLGDPYSGIVDLEIQILHDLACEVLEHAPVLNHAADACGDFD 689
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN---DGRIN- 555
C ++LA A + + P +T + ++ IQ GRH LQE+ V +FI ND ++ D R +
Sbjct: 690 CLVALARGARKYGWTAPTMTTDNVISIQGGRHPLQELAVHSFIANDCMLEGGCGDPRSHH 749
Query: 556 ------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMT 601
+ITGPN+SGKS+ IKQVALIV+L+HIGSFVPA AT+G+TD + ++
Sbjct: 750 GETTTLVITGPNHSGKSVCIKQVALIVYLAHIGSFVPASLATIGITDQILTRISTRESVS 809
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPK 660
++S+F DL Q ++R AT +SL ++DEFGKGT +DG GL+ G I++F PK
Sbjct: 810 QKESAFGTDLRQGAFVMRHATRRSLVVIDEFGKGTPADDGAGLMAGLIDHFTALGTDAPK 869
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
VL+ TH E+ G L L F M V R + + + +VFLY L G ++ S+G +
Sbjct: 870 VLITTHCHEIFEGGYLRDRPGLTFAYMDV-RLDLAAPIDDQVVFLYDLRLGRSISSFGSN 928
Query: 721 CALLAGVPAEVIKRA-AYVLEAAQN 744
CA + GV V++RA A +L A+N
Sbjct: 929 CAAINGVSKAVVERAEAIILLLARN 953
>gi|336382670|gb|EGO23820.1| hypothetical protein SERLADRAFT_450137 [Serpula lacrymans var.
lacrymans S7.9]
Length = 887
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 325/678 (47%), Gaps = 92/678 (13%)
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G LL L ER V +E + G + + + ++L++ ++++A A +LQ+F+ + H S
Sbjct: 163 GALLDHLNRERAV--VELNDLGIDGLEVRGIEGLTLDQAMQINADALFSLQVFEDENHAS 220
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
+ + KEG S+FG ++ T +GR LL+ W LRP L L +N+R +A+ F+ E L+
Sbjct: 221 -IHSDKTKEGLSLFGTLDNTQTTLGRSLLKTWLLRPSLSLSIINARHDAVECFIRPENLV 279
Query: 254 A--SLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR 311
++ LK +K++P IL T +W +K + ++L
Sbjct: 280 PVNAMQVHLKGIKNVPRILGNIRMGKAGIT--EWQGLVKFT--------FHSAMLRDALA 329
Query: 312 EQLRLLNFDIVEKAASCI-TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
E + +IV K + + + + ID S + G VR +ELD+ +
Sbjct: 330 EVNEAGDVEIVNKLIAVLDVASFKEIGNTINETIDWEESAQVGQ-VCVRPHIDEELDQRK 388
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTT-LEQ 427
+Y + L +VA Q+ + +VY Q+G+L+C+ ++L T ++
Sbjct: 389 HVYNGIDTILSKVAE----QISQTTPAEYASSLNVVYFPQLGFLLCVPMQELWQTEGIKV 444
Query: 428 LQGFEFAFSDMDGETKR--LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
L G+ F S T R +++ + + R++D +GDI+ I+D E I + L + ++
Sbjct: 445 LDGWSFQVSHCTYPTSRSYVYFKSQEMRDMDTHIGDIHPSIVDRELEIVQALQEEVLVYD 504
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPND 545
+ + + AELDC LS A +Y +P + ++ I+ GRH LQE VD F+ ND
Sbjct: 505 QVMGQTCDVCAELDCLLSFAAATRAFDYRKPRIVERSVIHIKQGRHPLQEQVVDIFVRND 564
Query: 546 TRI---------------DND-------GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ D D I + TG N GKS+Y+KQVALI +++ +
Sbjct: 565 AHLVAGAGFDFAESSCEYDGDPSEHQTCSSIILCTGANACGKSVYLKQVALIQYMAQV-Y 623
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
+VPA+AAT+G+ D + ++ QS+FMIDL+QV + LR T++SL LLDEFGKG
Sbjct: 624 YVPAEAATLGIVDKIFTRVQTRESVSKVQSAFMIDLNQVSLALRNCTARSLILLDEFGKG 683
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPE 693
T++ DG GL G + + + V P VL TH E+ + L +S + M VL
Sbjct: 684 TVSTDGAGLFCGVLKHLLDRGVNCPMVLAATHFHEVFRKDLLDAQSLPITLLHMQVLFAS 743
Query: 694 NNSTDVED---------------------------------IVFLYRLVPGHALLSYGLH 720
N VE+ + +LYR+ PG +L S+
Sbjct: 744 NPRQLVENPSSTRASSPVYDGIEDESMEDGDSDHKIIPGKRLTYLYRVAPGLSLNSHAAQ 803
Query: 721 CALLAGVPAEVIKRAAYV 738
CA + GVP +++RA YV
Sbjct: 804 CAAIFGVPRRIVQRAQYV 821
>gi|336369906|gb|EGN98247.1| hypothetical protein SERLA73DRAFT_123602 [Serpula lacrymans var.
lacrymans S7.3]
Length = 962
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 325/678 (47%), Gaps = 92/678 (13%)
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G LL L ER V +E + G + + + ++L++ ++++A A +LQ+F+ + H S
Sbjct: 238 GALLDHLNRERAV--VELNDLGIDGLEVRGIEGLTLDQAMQINADALFSLQVFEDENHAS 295
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
+ + KEG S+FG ++ T +GR LL+ W LRP L L +N+R +A+ F+ E L+
Sbjct: 296 -IHSDKTKEGLSLFGTLDNTQTTLGRSLLKTWLLRPSLSLSIINARHDAVECFIRPENLV 354
Query: 254 A--SLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR 311
++ LK +K++P IL T +W +K + ++L
Sbjct: 355 PVNAMQVHLKGIKNVPRILGNIRMGKAGIT--EWQGLVKFT--------FHSAMLRDALA 404
Query: 312 EQLRLLNFDIVEKAASCI-TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
E + +IV K + + + + ID S + G VR +ELD+ +
Sbjct: 405 EVNEAGDVEIVNKLIAVLDVASFKEIGNTINETIDWEESAQVGQ-VCVRPHIDEELDQRK 463
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTT-LEQ 427
+Y + L +VA Q+ + +VY Q+G+L+C+ ++L T ++
Sbjct: 464 HVYNGIDTILSKVAE----QISQTTPAEYASSLNVVYFPQLGFLLCVPMQELWQTEGIKV 519
Query: 428 LQGFEFAFSDMDGETKR--LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
L G+ F S T R +++ + + R++D +GDI+ I+D E I + L + ++
Sbjct: 520 LDGWSFQVSHCTYPTSRSYVYFKSQEMRDMDTHIGDIHPSIVDRELEIVQALQEEVLVYD 579
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPND 545
+ + + AELDC LS A +Y +P + ++ I+ GRH LQE VD F+ ND
Sbjct: 580 QVMGQTCDVCAELDCLLSFAAATRAFDYRKPRIVERSVIHIKQGRHPLQEQVVDIFVRND 639
Query: 546 TRI---------------DND-------GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ D D I + TG N GKS+Y+KQVALI +++ +
Sbjct: 640 AHLVAGAGFDFAESSCEYDGDPSEHQTCSSIILCTGANACGKSVYLKQVALIQYMAQV-Y 698
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
+VPA+AAT+G+ D + ++ QS+FMIDL+QV + LR T++SL LLDEFGKG
Sbjct: 699 YVPAEAATLGIVDKIFTRVQTRESVSKVQSAFMIDLNQVSLALRNCTARSLILLDEFGKG 758
Query: 636 TLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPE 693
T++ DG GL G + + + V P VL TH E+ + L +S + M VL
Sbjct: 759 TVSTDGAGLFCGVLKHLLDRGVNCPMVLAATHFHEVFRKDLLDAQSLPITLLHMQVLFAS 818
Query: 694 NNSTDVED---------------------------------IVFLYRLVPGHALLSYGLH 720
N VE+ + +LYR+ PG +L S+
Sbjct: 819 NPRQLVENPSSTRASSPVYDGIEDESMEDGDSDHKIIPGKRLTYLYRVAPGLSLNSHAAQ 878
Query: 721 CALLAGVPAEVIKRAAYV 738
CA + GVP +++RA YV
Sbjct: 879 CAAIFGVPRRIVQRAQYV 896
>gi|225679634|gb|EEH17918.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 748
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 204/683 (29%), Positives = 335/683 (49%), Gaps = 87/683 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
M + + + +G ++ L+ R + L + SGN + SV SL + + +L
Sbjct: 1 MNNRISIGCAGAIVTYLQRIRATECLSRDHSGNEGFNVQSVEIRSLKGTMFANTDTLTSL 60
Query: 184 QIFQTDKHPS--HMGIGR----AKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENL 236
Q+ Q++ HP+ + G G+ +KE S+FG+ + TP G+ LR FLRP DL +
Sbjct: 61 QVIQSESHPNAFNQGPGKTSSGSKESLSIFGLFHHFARTPQGKARLRRKFLRPSTDLACI 120
Query: 237 NSRLNAISFFLCSEELMA--SLHETLKYVKDIP----HILKKFNSPSFIYTASDWTAFLK 290
R + IS +L S+ +A L ++LK +K++ H+ K +S + + + AF
Sbjct: 121 RERNDFISTYLRSDNGVAIEKLTKSLKGIKNLRPVMVHVRKGISSGN-----AKFKAFKS 175
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-VYELVIGIIDVNRS 349
+ + L + + E++R N DI + + + + + ++ +D+ S
Sbjct: 176 GVWATLLEFAFHAIDVRETIRTVTGAENLDIHARVLDKLDIAILHQIGRIIHETVDLQSS 235
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQ 408
E+ + T+V++ ELD+L++ Y L L +VA +P L ++ V +Y Q
Sbjct: 236 IEE-HRTVVKQRMDRELDDLKEAYNGLDNLLNQVAINIASTIPERLSNDLNV---IYFPQ 291
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+G+ + + LD+ G + + + R+++ + RE+D GDIY I +
Sbjct: 292 LGFNIAM---PLDERGRAVYNGGDQPWDQIFTTENRVYFKDYRMREMDEKFGDIYGLICE 348
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
E I ++ + + + L++A + ELD L+L A +RP +T + + I+
Sbjct: 349 KEIEIVYEMAQKVLQYENTLVEASDICGELDSLLALVQGASLYKLIRPQMTQDNSIIIKG 408
Query: 529 GRHVLQEMTVDTFIPNDTRI--DNDGR------------------------INIITGPNY 562
GRH+L E+TV TFIPNDT I N G + ++TGPNY
Sbjct: 409 GRHLLHEVTVPTFIPNDTLIVGGNKGEGPSPSPSAPLLENSDVIVETQGPSMLLLTGPNY 468
Query: 563 SGKSIYIKQ------------------VALIVFLSHIGSFVPADAATVGLTD---SKHMT 601
SGKS+Y+KQ VALIV+++HIGSFVPA++A +G+TD ++ T
Sbjct: 469 SGKSVYLKQVCLLVNNPNKRVKLTTLWVALIVYMAHIGSFVPAESARIGITDKILTRITT 528
Query: 602 AE--------QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
E QSSFMIDL Q+ L AT +SL ++DEFGKGT + DG GL G + +
Sbjct: 529 RETVSKARWAQSSFMIDLQQMSYALTLATERSLIIVDEFGKGTESTDGAGLACGLFEHLL 588
Query: 654 TC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ + PKVL TH E+ G LP L F M V + ++ + DVE+ V G
Sbjct: 589 SLGEKRPKVLAATHFHEIFENGFLPPRRELGFGYMEV-QVDSTARDVENQVTFR---SGR 644
Query: 713 ALLSYGLHCALLAGVPAEVIKRA 735
+ S+G +CA L G+ +I RA
Sbjct: 645 SNASFGTNCAALNGIDPAIIARA 667
>gi|389625751|ref|XP_003710529.1| DNA mismatch repair protein MutS [Magnaporthe oryzae 70-15]
gi|351650058|gb|EHA57917.1| DNA mismatch repair protein MutS [Magnaporthe oryzae 70-15]
Length = 947
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 212/767 (27%), Positives = 348/767 (45%), Gaps = 100/767 (13%)
Query: 31 VWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS----DGTTEAPTVKLVKSS 86
+ +D+ + LI+ + QP + ++ + ++ L+R G E LV +
Sbjct: 156 IQQDTMAGIELIETILLHVQPTKVIVPNRASDELVTYLERRAHNIQGNNEGIHPSLVMN- 214
Query: 87 IFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
+ + A I G + G L S++++ S + + +G +L+ L+ R
Sbjct: 215 -MAGDSALEADISGSAFGSNQG------NLRLGSLINLSSRLSIGCAGAILSELQRRRAS 267
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGR------A 200
+ L + + +A+ I ++ L + L+ +ALQI +++ HP G A
Sbjct: 268 ECLYRDQDVSAAHAIRTITMFDLANSMFLNDDTLDALQILRSESHPDSQKGGPDKSSSGA 327
Query: 201 KEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLH 257
KE SV+G+ + TP G+ L+ FLRP D+ L R I+ L E E +
Sbjct: 328 KESLSVYGLFQRHARTPQGKAKLKQTFLRPSTDMGLLGERHRIIAILLRPENSETFTMII 387
Query: 258 ETLKYVKDI----PHILKKFNSPSFIYTASD--WTA---FLKSICSLLHVNKIFEVGISE 308
+ L+ +K++ HI + + PS + A W + F K L ++ E G +
Sbjct: 388 KHLRMIKNMKAIMSHIQRGVDKPSSLAPAKRGVWKSLQRFSKFTVELYETVRVLETGGAP 447
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L ++N A ++ V ++V ID + + E T++ G ++LD+
Sbjct: 448 -----LEVVN----RMQAQVDPRQIMQVGKVVSDTIDFD-ATETINDTVILPGVSEDLDQ 497
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL 428
L + Y P L+E A + +P CI Y HQ+G+L I + +
Sbjct: 498 LTRTYNGFPSLLQETARHIVRDVPEWAAAYIEHCIYY-HQLGFLTVISANANGEPNYD-- 554
Query: 429 QGFEFAFSDMDGETKRLFYH-------TPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
G E D + +R+F H + +ELD+ GDI +I + + + +
Sbjct: 555 -GPEPGAGD---DWERIFVHEGNFYFKNRRMKELDDYFGDIVAQIHGEQPSTS------L 604
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTF 541
C L ELD +LA VA Q N P +T +L+I+NGRH+LQE+ V F
Sbjct: 605 CCRKSSL-------GELDSLTALAAVAQQYNLTAPEMTESNVLEIKNGRHLLQELVVSAF 657
Query: 542 IPND-----------------------TRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+PND + + + I+TGPN+SGKS+Y+KQVALIV+L
Sbjct: 658 VPNDCLLCGGNGSESESAGSSTSELSHSEGEKTPSMLILTGPNHSGKSVYLKQVALIVYL 717
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+H+GSFVPA+ A +G D + +S+F ID+ Q + AT +SL L+D
Sbjct: 718 AHVGSFVPAEWARIGTVDRILTRVSTRESAARPESAFAIDMRQAAFSINLATRRSLVLID 777
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTC--DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
EFGKGT DG L F +V PKVL TH E+ + L +S + F M
Sbjct: 778 EFGKGTSPVDGAALAAALFTQFAEAGENVRPKVLAATHFHEIFEQELLAQSPTVGFAHME 837
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ N + + FLY +VPG ++ S+G +CALL G+ +++ RA
Sbjct: 838 INVDYNTQYLEDQVTFLYTMVPGRSISSFGTNCALLNGIDDKIVARA 884
>gi|403167315|ref|XP_003889868.1| hypothetical protein PGTG_21511 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166959|gb|EHS63295.1| hypothetical protein PGTG_21511 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1260
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 236/815 (28%), Positives = 368/815 (45%), Gaps = 112/815 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSD- 72
+G +YYD S +++E D+ +F ++ ++ Q P+++ S+K+EES S +++++
Sbjct: 1 MGGAYYDPSNGIFYLMEDAVDTGGEFEVLIMLLEQVMPEVVLLSSKAEESLTSCIQKAEC 60
Query: 73 --GTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDD----------------------G 108
G + PTV S +S + +L L V D G
Sbjct: 61 PGGIDKTPTVVKRPSREYSASDGFKKLQRLSVRSQDGVVPSGNHHSSSTSTRSTASQDPG 120
Query: 109 LSI---KERICYLNSMMDM-GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
I K N+ +++ S + A LL+ L++ D + +S + + V
Sbjct: 121 RDIHFSKNSNLTANAFINVEASHYSLGAVAALLSYLQSGIARD--QDNDSPQGGLFVSKV 178
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
+ KF+ L A ++LQIF + H ++ + KEG S++G++N+C+T G+ LLRN
Sbjct: 179 EMIKTQKFMHLGNDAIQSLQIFDQEAH-ANSHFSKTKEGLSLYGILNECITHNGKLLLRN 237
Query: 225 WFLRPILDLENLNSRLNAISFFLCSEE----LMASLHETLK-------------YVKDIP 267
W LRP D + + SR +AI FL E L+ SL +L YV +
Sbjct: 238 WLLRPSTDPKVIGSRQDAIECFLEPENGVVILLLSLFASLPSVNQLLDLAFSADYVGKMR 297
Query: 268 HILK---KFNSPSFIYTA-----SDWTAFLKSI--CSLLH-----VNKIFEVGISESLRE 312
LK N + I ++ +W + SI C L+ +N E + ++
Sbjct: 298 QDLKLLGNINRTTMIISSGKSRVGEWKSLTNSIHACQALYEDFSKMNLTIETPLFIKMKS 357
Query: 313 QLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ R L D+ E AS I +ID + SK G +R +ELD R
Sbjct: 358 RDR-LEIDL-EPLASNIEE-----------LIDWSESKLNGGRVTIRSDVDEELDGYRGQ 404
Query: 373 YEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI-FEEKLDDTTLEQLQGF 431
Y + L +A + P F I Y QIGYL I F L+ +
Sbjct: 405 YASMETQLCFIAEKVSTETPFKSLPGF--SINYFPQIGYLCAIPFPTPSGSVDPSTLEDW 462
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
EF FS E Y RELD+ GD+ I D E + L + F+ LL
Sbjct: 463 EFQFSTDTEE----HYKNGLMRELDDHYGDLATAIDDREIELVHILEEEVSKFASILLSV 518
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT----- 546
+ AELDC LSLA V + ++RP + + + I GRH L E V+ +IPNDT
Sbjct: 519 NDDLAELDCLLSLAKVTFERTWVRPKILNQNTIQIIAGRHPLVEGCVENYIPNDTHLVAS 578
Query: 547 ---RIDNDGRIN----------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
+ R + ++TG N+SGKS+Y+KQVA+IV ++ +GSFVPA+ A +G
Sbjct: 579 APSKAQRKKRKSTESYTGNPMIVLTGANFSGKSVYLKQVAMIVIMAQLGSFVPAEEAHIG 638
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
+ D ++ + S+FMIDL +V MLR T++SL L+DEFGKGT DG L
Sbjct: 639 IHDAVFTRVSTTESASRSSSAFMIDLLRVSFMLRNCTARSLLLIDEFGKGTDPTDGQALF 698
Query: 646 GGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G I + ++ P LV TH + G L + + M ++ + + E+
Sbjct: 699 CGVIEHLISRGSSCPITLVSTHFHGVFTNGFLSLDLPIDYTHMCIVLKDGGGPEEENSPT 758
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+LY+L P S+ + CA AGVP + +A V
Sbjct: 759 YLYKLAPDLVSSSHAMGCAAQAGVPRHIRLKADRV 793
>gi|326479191|gb|EGE03201.1| DNA mismatch repair protein msh5 [Trichophyton equinum CBS 127.97]
Length = 821
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 215/745 (28%), Positives = 360/745 (48%), Gaps = 97/745 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
+G SYY + +L+V+E D +IDI+K + +P +S +
Sbjct: 104 IGCSYYSAQEEKLYVMEDIVYGGHD--VIDILKLEIEPTTRISSYHT------------- 148
Query: 74 TTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMD-DGLSIKERICYLNSMMDMGSEVQVRA 132
V+ FS++ VTG + D + + + ++DM + + V
Sbjct: 149 -----CWTCVQPKSFSHDG--------NVTGENVDFTEQQGDLLNIGGVIDMENCISVGC 195
Query: 133 SGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP 192
+G ++ L+ +R +L+ +I I ++ +SL K + ++ +LQI Q++ HP
Sbjct: 196 AGAIITYLQRKRATLSLQHGSLVAPAIGISAIGMISLQKTMLINRDTLASLQILQSESHP 255
Query: 193 S--HMGIGR----AKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
+ + G G+ +KEG S++G+ + TP G+RLL+ FLRP D + R IS
Sbjct: 256 NAFNQGPGKTSSGSKEGLSIYGLFHHFARTPQGKRLLKQLFLRPSTDPTVIGQRHEFISV 315
Query: 246 FLCSEELMASLHETLKYVKDIP-------HILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
FL E SL + +K +K+I H+ K ++ S + + F + S L
Sbjct: 316 FLRPEN-DPSLQQLIKSLKNIKNMRPVMIHLRKGISTGS-----AKFRGFKGVVWSSLLD 369
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
+ ++++L+E + ++ +L V + I+D++ S E+ + T+V
Sbjct: 370 FAFHAIDVNQALKE---VTGLQALDALLKLDLAQLHQVGAKIHEIVDLSLSVEE-HRTVV 425
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPH-LCKEMFVPCIVYIHQIGYLMCIFE 417
R +LD L++ Y + L +VA LP + KE+ V VY Q+G+ + +
Sbjct: 426 RPRIDQDLDNLKETYSGMDSLLNQVAINIAASLPEGITKEINV---VYFPQLGFNIAM-- 480
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
D + + ++ + R ++ + RE+D LGDIY I + E I L
Sbjct: 481 -PFKDRGMPMYGSNDEDWTQVFNTENRAYFKDSRMREMDEKLGDIYGLICEKEIEIVYKL 539
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
I ++ L+ A + E+D L+L A + +RP +T E ++ I++GRH+L E T
Sbjct: 540 AQDILIYEKMLVDASDICGEIDSLLALVQGASLHKLVRPRMTEENIISIKSGRHMLHEAT 599
Query: 538 VDTFIPNDTRI----------DNDGRIN----------------IITGPNYSGKSIYIKQ 571
V +F+PNDT I ND N ++TGPN+SGKS+Y+ Q
Sbjct: 600 VSSFVPNDTIIVGGKGSLEDTPNDVPSNTESRPTGDTAQGPSMLLLTGPNFSGKSVYLSQ 659
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
VA+IV+++HIGSFVPAD+A +G TD + ++ QS+F DL QV L QAT+
Sbjct: 660 VAIIVYMAHIGSFVPADSAIIGYTDRILTRISTRETVSKVQSTFANDLQQVSFALNQATN 719
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERL 682
+SL ++DEFGKGT + DG GL G Y ++ D PKV+ TH E+ G L L
Sbjct: 720 RSLIIIDEFGKGTESSDGAGLACGLFEYVLSVGDQRPKVIAATHFHEIFENGFLKPRPEL 779
Query: 683 KFYTMSVLRPENNSTDVED-IVFLY 706
+F M V + ++ +VED + +LY
Sbjct: 780 EFGHMEV-QVNRSAPNVEDQVTYLY 803
>gi|389625749|ref|XP_003710528.1| DNA mismatch repair protein MutS, variant [Magnaporthe oryzae
70-15]
gi|351650057|gb|EHA57916.1| DNA mismatch repair protein MutS, variant [Magnaporthe oryzae
70-15]
Length = 735
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 199/676 (29%), Positives = 319/676 (47%), Gaps = 88/676 (13%)
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L S++++ S + + +G +L+ L+ R + L + + +A+ I ++ L + L+
Sbjct: 27 LGSLINLSSRLSIGCAGAILSELQRRRASECLYRDQDVSAAHAIRTITMFDLANSMFLND 86
Query: 178 TAHEALQIFQTDKHPSHMGIGR------AKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPI 230
+ALQI +++ HP G AKE SV+G+ + TP G+ L+ FLRP
Sbjct: 87 DTLDALQILRSESHPDSQKGGPDKSSSGAKESLSVYGLFQRHARTPQGKAKLKQTFLRPS 146
Query: 231 LDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDI----PHILKKFNSPSFIYTASD 284
D+ L R I+ L E E + + L+ +K++ HI + + PS + A
Sbjct: 147 TDMGLLGERHRIIAILLRPENSETFTMIIKHLRMIKNMKAIMSHIQRGVDKPSSLAPAKR 206
Query: 285 --WTA---FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
W + F K L ++ E G + L ++N A ++ V ++
Sbjct: 207 GVWKSLQRFSKFTVELYETVRVLETGGAP-----LEVVN----RMQAQVDPRQIMQVGKV 257
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
V ID + + E T++ G ++LD+L + Y P L+E A + +P
Sbjct: 258 VSDTIDFD-ATETINDTVILPGVSEDLDQLTRTYNGFPSLLQETARHIVRDVPEWAAAYI 316
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH-------TPKT 452
CI Y HQ+G+L I + + G E D + +R+F H +
Sbjct: 317 EHCIYY-HQLGFLTVISANANGEPNYD---GPEPGAGD---DWERIFVHEGNFYFKNRRM 369
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+ELD+ GDI +I + + + +C L ELD +LA VA Q N
Sbjct: 370 KELDDYFGDIVAQIHGEQPSTS------LCCRKSSL-------GELDSLTALAAVAQQYN 416
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTVDTFIPND-----------------------TRID 549
P +T +L+I+NGRH+LQE+ V F+PND + +
Sbjct: 417 LTAPEMTESNVLEIKNGRHLLQELVVSAFVPNDCLLCGGNGSESESAGSSTSELSHSEGE 476
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE--- 603
+ I+TGPN+SGKS+Y+KQVALIV+L+H+GSFVPA+ A +G D ++ T E
Sbjct: 477 KTPSMLILTGPNHSGKSVYLKQVALIVYLAHVGSFVPAEWARIGTVDRILTRVSTRESAA 536
Query: 604 --QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC--DVPP 659
+S+F ID+ Q + AT +SL L+DEFGKGT DG L F +V P
Sbjct: 537 RPESAFAIDMRQAAFSINLATRRSLVLIDEFGKGTSPVDGAALAAALFTQFAEAGENVRP 596
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
KVL TH E+ + L +S + F M + N + + FLY +VPG ++ S+G
Sbjct: 597 KVLAATHFHEIFEQELLAQSPTVGFAHMEINVDYNTQYLEDQVTFLYTMVPGRSISSFGT 656
Query: 720 HCALLAGVPAEVIKRA 735
+CALL G+ +++ RA
Sbjct: 657 NCALLNGIDDKIVARA 672
>gi|367043440|ref|XP_003652100.1| hypothetical protein THITE_2113164 [Thielavia terrestris NRRL 8126]
gi|346999362|gb|AEO65764.1| hypothetical protein THITE_2113164 [Thielavia terrestris NRRL 8126]
Length = 867
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 230/817 (28%), Positives = 366/817 (44%), Gaps = 105/817 (12%)
Query: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKR-- 70
RVG +YY + +L VLE E +D + QP + ++ + L+R
Sbjct: 10 RVGCAYYVAMDEEL-VLE-EEIPMGGIEAVDTLLLLVQPTSVIIPNRAPGDLIEFLERDA 67
Query: 71 --------SDGTTEAPTVKLVKSSIFSYEQAWHRLIYL----------RVTGMDD----- 107
SDG + ++ V S+ F Y+ L + +V +++
Sbjct: 68 YRFDGSEGSDGEQGSYILRHVVSAQFDYDAGKEALTKVDVEPAKPDPVQVQSLEEEPVQS 127
Query: 108 -GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIE 166
G S ++ L ++ S + V +G +L LE R + E G+ + ++ SV
Sbjct: 128 IGSSSHNKLMRLAERINFESCLSVGCAGAVLNDLERRRTAEQPSTGEDGDFTFSVRSVKM 187
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHP------SHMGIGRAKEGFSVFGMMNKCVT-PMGR 219
S + + A + +LQI Q++ HP S+ +AKE SV G++ + G+
Sbjct: 188 ESAEDTMIISADSLISLQILQSELHPNPQTRSSNSSEPKAKEALSVTGLLQALASSAQGK 247
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSP- 276
R LR LRP DL + R +I L +E E+ ++ + L+ +K+ +L+
Sbjct: 248 RRLRQMLLRPSTDLAVIRERHMSIEILLRTENSEIAKNMRKQLRKLKNPKTLLRHVRRGV 307
Query: 277 -----SFIYTASDWTAFLKSI---CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASC 328
DW A L+ L H + G S + + K S
Sbjct: 308 DRVRGQLSLRVGDWKALLRFAMVSAQLKHATHALK-GAS----------HIPLFSKICSE 356
Query: 329 ITTE-LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I + +V +++I ID SK+ G T + G + LD LR+ + + L E+
Sbjct: 357 INVKRFLHVGDIIIRTIDFQLSKDSGR-TEILPGASEYLDGLREEFAHVRRLLAELRESV 415
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE------ 441
++P E C V + Q+G+L+ + +E +G +GE
Sbjct: 416 AREVPEEVAEHIRHCTV-MPQLGFLVAV------TIDVETGEGIYHGQHHPEGEWTMCFV 468
Query: 442 -TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
++Y +LD GD+ +I D E + L + + + +L A ELD
Sbjct: 469 SGDMVYYKNQLMLDLDVQYGDLPSRIADEEIEVIMALAAAVLEHEEAILSASELFGELDS 528
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN--------DG 552
L+LAL A + N+ P +T ++DI +GRH LQE+ V +FIPND + D
Sbjct: 529 MLALALAAEKYNWTAPTMTASNVIDIVDGRHPLQELLVPSFIPNDCALAGGCGASDLEDD 588
Query: 553 RIN-------------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
R+ I+TGPN SGKS+Y++QVALIV+L+H GS+VPA AT+G+TD
Sbjct: 589 RLGMSNGRKASFPSMLILTGPNSSGKSVYMRQVALIVYLAHTGSYVPAARATIGVTDRIL 648
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
+ + ++S+F++DL Q + AT +SL L+DEFGKGT + G L + Y
Sbjct: 649 TRIATRETVVNDESAFLVDLKQAAFAMNFATRRSLLLIDEFGKGTTADSGSALFTAYLTY 708
Query: 652 FVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSV-LRPENNSTDVEDIVFLYRLV 709
F+ PKVL TH E+ G L E + F M V L PE D E + FL+RL+
Sbjct: 709 FLGLGTERPKVLAGTHFHEVFENGLLMPGEDVAFGHMDVRLDPEAEDPD-EAVTFLFRLL 767
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
PG S G+ CA VP++VI RA ++ NN+
Sbjct: 768 PGRGSSSLGVLCAASNDVPSDVINRARAIVALLDNNE 804
>gi|302689723|ref|XP_003034541.1| hypothetical protein SCHCODRAFT_107116 [Schizophyllum commune H4-8]
gi|300108236|gb|EFI99638.1| hypothetical protein SCHCODRAFT_107116, partial [Schizophyllum
commune H4-8]
Length = 1049
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 245/898 (27%), Positives = 392/898 (43%), Gaps = 209/898 (23%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKY---QAQPQIIYTSTKSEESFLS 66
HG R+ +YYD ++VLE +++ P +D+ + QAQP II TS++ ++ F+
Sbjct: 67 HG-RMACAYYDPIKCIVYVLEDTQET----PHLDLTQTLLEQAQPDIILTSSRGDDEFID 121
Query: 67 ALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLI---------------------------- 98
L R ++ F+ + RL
Sbjct: 122 KL-RDHAEASGGHFQIRPHKEFNTAKGRDRLFSLPLLSELPAQYDQGAPSSDSGSGGSCL 180
Query: 99 -----YLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRAS-------GGLLAVLENERIV 146
++R DG + N+ + + + V +S G LL L ER V
Sbjct: 181 RNAYDFMRSRRNADGNGGDPTLKRWNASIRLANFASVDSSPLCIACVGALLDHLVRERAV 240
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
+ LE E G + + I + ++LNK + ++A A +L IF+ + H S + + KEG S+
Sbjct: 241 NDLE--EEGISGLAIRDIESIALNKMMHINADALYSLGIFEDESHAS-IHSDKTKEGLSL 297
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVK 264
FG++N T +GR+LL+ WFLRP L + + +R +AI FL + + S+H LK +K
Sbjct: 298 FGIINTTKTTLGRQLLKTWFLRPSLSIPVITARHDAIDCFLSPDNNSPVRSMHGHLKGIK 357
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
++P IL S T +W +K H I E+L E + ++V+K
Sbjct: 358 NVPRILATIKSGG--ATLVEWQGLVKFT---FHATMI-----REALTELHGAGHIEVVKK 407
Query: 325 AASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
+ + A +E+ V II+ + S E G VR G +ELD + +Y + L
Sbjct: 408 LFGVL--DAAAFHEVGCKVNDIIEWDESTEAGR-VCVRMGIDEELDNRKHVYNGIDSVLS 464
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEFAFSDMD 439
+A +P E +VY Q+G+L+C+ E+ D+ ++ + G+ F FS
Sbjct: 465 NIAEQMSQTVPAEYAESLN--VVYFPQLGFLVCVPMLEDWKDEQGIQVMDGWTFQFS--- 519
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
ET +++ + + ++D +GD++ I+D E I ++L++ I ++ + + D
Sbjct: 520 SET-HVYFKSEEMHDMDVHIGDLHSLIVDREIEIVQELLTEILVYYE------DMTGSCD 572
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI----------- 548
LSLA NY RPI+ E ++ I GRH LQE VDTF+ NDTR+
Sbjct: 573 VLLSLADACRAFNYRRPIMVDENVIIINGGRHPLQEQVVDTFVANDTRLAGGLGAHVQMD 632
Query: 549 DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS--FVPADAATVGLTDS--------K 598
+DG N G GK+ ++K VAL + G FVPAD+AT+GL D
Sbjct: 633 SDDGEENEDGG---RGKTEFMKPVALCTGANACGKSVFVPADSATLGLVDKIFTRISTRD 689
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE------------------- 639
++ QS+FMIDL+QV + LR +T++SL LLDEFGKGT++
Sbjct: 690 SVSKVQSAFMIDLNQVSLALRNSTARSLVLLDEFGKGTISTGHSHCSTRSLARSLVQILS 749
Query: 640 ------------------DGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCL- 676
DG GL G + + + C PKV+ TH ++ E L
Sbjct: 750 SSSFAVCLLLSLRSLGALDGAGLFCGVLKHLLDRGSDC---PKVMAATHFHDVFREDLLD 806
Query: 677 PKSERLKFYTMSVL------------------------------RPENNSTDVE------ 700
P+S + F M V+ RP+ ++ E
Sbjct: 807 PESVPIAFLHMQVMFEKEDATFGGRQKSFGERQTSFGQPGTAASRPDTTASRYETPFSGR 866
Query: 701 --------------------DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
I +LYR+ G +L S+ CA + G+PAE+ RA YV
Sbjct: 867 DTPVDGRLTTPLPSAPVRGEKITYLYRVAEGLSLNSHAAQCAEIFGLPAEICARAQYV 924
>gi|238881564|gb|EEQ45202.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 623
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 180/637 (28%), Positives = 318/637 (49%), Gaps = 61/637 (9%)
Query: 175 LDATAHEALQIF-QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
+D + ALQI +T K P+ I + S++ ++N VT G +LL++W +P+ ++
Sbjct: 3 IDVDSLYALQILPETRKSPN---INSKSQKLSLYDLLNNTVTTEGAKLLKDWVRKPLTNI 59
Query: 234 ENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ L R N + SE E+ +++ + LKY K+ I+ + + W +
Sbjct: 60 DKLLERQNTVKILSQSELHEIRSNIRKGLKYTKNSKSIVNGLEAGKSNWQV--WKNLVLF 117
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY--ELVIGIIDVNR- 348
+ ++++++K +G SE + TELA Y EL+I ++ +
Sbjct: 118 LQNVMYLSKQIRLGFSEE------------------NLPTELALFYNQELMIAFNELEKL 159
Query: 349 --------SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ E+ + G D LDELR Y L E L+E + + +E+F
Sbjct: 160 ILSYAEPITSEEDNKLRIINGVDDTLDELRIQYNNLEEVLQETTR---IIAANFLEEVF- 215
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
VYI Q+G+L+ + D + ++ + ++Y T + +LD G
Sbjct: 216 -NTVYIPQLGFLVS----READVQTADSTFMPNEWQEVFRTSTNIYYKTDEVWQLDEQYG 270
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
DIY I D E I + +++ + F+ +++ A ELDC SL+ V+ NY P +T
Sbjct: 271 DIYTSINDREIEIIQSMLAKVSEFNTVIIQVGEAAVELDCLCSLSEVSQFRNYAFPCITD 330
Query: 521 EPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
L+I GRH L E + F+PNDT D++ +I ++TG N SGKS+Y+ Q ALIV ++
Sbjct: 331 TNELEIVQGRHPLVETFSNMFVPNDTIFDSEEKIMVVTGANLSGKSVYLNQSALIVVMAQ 390
Query: 581 IGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG +PA+ AT+G+ D + + +QS+F ID++Q+ + AT +SL ++DEF
Sbjct: 391 IGCAIPAENATLGIVDKILTRISSRESLDKQQSTFAIDVYQLSKCISLATDRSLVIVDEF 450
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELL--NEGC-LPKSERLKFYTMS 688
GKG+ D + GGT++YF + P+ + TH +L E C + +S ++K +
Sbjct: 451 GKGSDPIDSTSMFGGTLSYFKKKSLDCPRCIFSTHFLDLFKDKEFCNMYQSPKIKMMSTE 510
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+L + ++ ++++ +LY++ PG A S+G++CA L G+ +VI+RA Y+ + N V
Sbjct: 511 ILLEKTTNSMLDNVTYLYKVKPGLATKSFGIYCAKLCGISEKVIQRAEYIAQMLDNGDDV 570
Query: 749 ERWSHENISAQDQQY---KNAVEKMLAFDVLKGDLRL 782
+ ++Q Y K V K L + +L +
Sbjct: 571 AYELTKLSEEEEQNYSVAKTVVTKFLEIEFEDAELSI 607
>gi|116206900|ref|XP_001229259.1| hypothetical protein CHGG_02743 [Chaetomium globosum CBS 148.51]
gi|88183340|gb|EAQ90808.1| hypothetical protein CHGG_02743 [Chaetomium globosum CBS 148.51]
Length = 861
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 237/833 (28%), Positives = 382/833 (45%), Gaps = 112/833 (13%)
Query: 13 RVGVSYYDSSIRQLHVLEVWED-SNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKR- 70
+VG +YY I L + ED S +D + Q QP + ++ + L+R
Sbjct: 10 KVGCAYY---IAMDEALVLEEDISMGGVEAVDTLLLQVQPTSVIIPNRAPGDLIELLERD 66
Query: 71 ---------SDGTTEAPTVKLVKSSIFSYEQAWHRL------------IYLRVTGMDD-- 107
S A ++ + S+ F YE L I + V G +
Sbjct: 67 AHRFDDNESSCSGQGAYVLRHIVSAHFDYEAGKEALAKVDQAPSKPDPINVLVLGEEPVQ 126
Query: 108 --GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT--IDS 163
G SI ++ L +D+ S + + +G +L LE R + +E + + + S
Sbjct: 127 SIGSSIHNKLMRLAEKIDLESCLSIGCAGAVLIDLERRRTTENSSFEEEESRTFQFLVKS 186
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHP------SHMGIGRAKEGFSVFGMMNKCVT-P 216
+ + + ++ + +LQI Q++ HP S+ +AKE S+ G++ +
Sbjct: 187 IEMNTSTDTMLVNGDSLISLQILQSELHPNPQTRSSNSSEPKAKEALSITGLLQALASSA 246
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIP----HIL 270
G++ LR LRP D+ + R +I L +E E+ ++ L+ +K+ H+
Sbjct: 247 QGKKRLRQILLRPSTDIGLIQERQRSIETLLHAENREVARNMRRLLRKLKNTKTLLLHVR 306
Query: 271 KKFNS--PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL----NFDIVEK 324
K + DW A L+ F + +S L+ + L D+ ++
Sbjct: 307 KGVDRIRGQLSIRVGDWKALLR-----------FAM-VSAQLKRSIHTLKGASGIDVFDR 354
Query: 325 -AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
A +V +++I ID SKE G+ T + G D LD LR+ + + L E+
Sbjct: 355 IRAEVDVNRFLHVGDIIIRTIDFQLSKESGH-TEILPGASDYLDGLRREFANVCHMLPEL 413
Query: 384 ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL---QGFE-------F 433
+ ++P + + C + + Q+G+L+ + +LD T E + QG F
Sbjct: 414 KRSVVEEVPAEAGQFMLHCTI-MPQLGFLIAV---RLDPGTGEGVYHGQGHPEGEWLMCF 469
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
DM +Y +LD+ GD+ +I D E + L + + + +L A
Sbjct: 470 VSGDM------AYYKNQLMLDLDSQYGDLPSRIADEEIEVMMALSAAVLEHEEAILGASE 523
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-DNDG 552
ELD L+LAL A + N+ P +T ++DI GRH LQE+ V ++IPNDT + DG
Sbjct: 524 LFGELDSMLALALAAEKYNWSAPTMTPLNVIDIVEGRHPLQELLVPSYIPNDTTMAGGDG 583
Query: 553 ------------RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
+ I+TGPN SGKS+Y++QVALIV+L+H GS+VPA AT+G+TD
Sbjct: 584 TGCSEGVKRPAPSMLILTGPNNSGKSVYMRQVALIVYLAHTGSYVPATRATIGITDRILT 643
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
+ + +++S+F++DL Q + AT +SL L+DEFGKGT E G L + Y
Sbjct: 644 RIATRETVVSDESAFLVDLKQAAFSMNFATRRSLLLIDEFGKGTTAESGSALFTAYLTYL 703
Query: 653 VTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSV-LRPENNSTDVEDIVFLYRLVP 710
+ V PKV+ TH E+ G L + + F M V L PE D E I FLYRL+P
Sbjct: 704 LDLGVERPKVIGGTHFHEVFENGLLRPGKDVAFAHMDVHLDPEAEDPD-EQITFLYRLLP 762
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH-VERWSHENISAQDQQ 762
G S G+ CA VP+ VI RA V+ N++ VE S +S +D+Q
Sbjct: 763 GRGTSSLGVLCAATNDVPSAVISRAKAVVALQDRNENLVEACS--GLSEEDKQ 813
>gi|68470914|ref|XP_720464.1| hypothetical protein CaO19.2713 [Candida albicans SC5314]
gi|46442333|gb|EAL01623.1| hypothetical protein CaO19.2713 [Candida albicans SC5314]
Length = 623
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/638 (28%), Positives = 319/638 (50%), Gaps = 63/638 (9%)
Query: 175 LDATAHEALQIF-QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
+D + ALQI +T K P+ I + S++ ++N VT G +LL++W +P+ ++
Sbjct: 3 IDVDSLYALQILPETRKSPN---INSKSQKLSLYDLLNNTVTTEGAKLLKDWVRKPLTNI 59
Query: 234 ENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ L R N + SE E+ +++ + LKY K+ I+ + + W +
Sbjct: 60 DKLLERQNTVKILSQSELHEIRSNIRKGLKYTKNSKSIVNGLGAGKSNWQV--WKNLVLF 117
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY--ELVIGIIDVNR- 348
+ ++++++K +G SE + TELA Y EL+I ++ +
Sbjct: 118 LQNVMYLSKQIRLGFSEE------------------NLPTELALFYNQELMIAFNELEKL 159
Query: 349 ---------SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
S+E ++ G D LDELR Y L E L+E + + +E+F
Sbjct: 160 ILSYAEPIISEEDNKLRIIN-GVDDTLDELRIQYNNLEEVLQETTR---IIAANFLEEVF 215
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
VYI Q+G+L+ + D + ++ + ++Y T + +LD
Sbjct: 216 --NTVYIPQLGFLVS----READVQTADSTFMPNEWQEVFRTSTNIYYKTDEVWQLDEQY 269
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
GDIY I D E I + +++ + F+ +++ A ELDC SL+ V+ NY P +T
Sbjct: 270 GDIYTSINDREIEIIQSMLAKVSEFNTVIIQVGEAAVELDCLCSLSEVSQFRNYSFPCIT 329
Query: 520 LEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLS 579
L+I GRH L E + F+PNDT D++ +I ++TG N SGKS+Y+ Q ALIV ++
Sbjct: 330 DTNELEIVQGRHPLVETFSNMFVPNDTIFDSEEKIMVVTGANLSGKSVYLNQTALIVVMA 389
Query: 580 HIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IG +PA+ AT+G+ D + + +QS+F ID++Q+ + AT +SL ++DE
Sbjct: 390 QIGCAIPAENATLGIADKILTRISSRESLDKQQSTFAIDVYQLSKCISLATDRSLVIVDE 449
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELL--NEGC-LPKSERLKFYTM 687
FGKG+ D + GGT++YF + P+ + TH +L E C + +S ++K +
Sbjct: 450 FGKGSDPIDSTSMFGGTLSYFKKKSLDCPRCIFSTHFLDLFKDKEFCNMYQSPKIKMMST 509
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+L + ++ ++++ +LY++ PG A S+G++CA L G+ +VI+RA Y+ + N
Sbjct: 510 EILLEKTTNSMLDNVTYLYKVKPGLATKSFGIYCAKLCGISEKVIQRAEYIAQMLDNGDD 569
Query: 748 VERWSHENISAQDQQY---KNAVEKMLAFDVLKGDLRL 782
V + ++Q Y K V K L + +L +
Sbjct: 570 VAYELTKLSEEEEQNYSVAKTVVTKFLEIEFEDAELSI 607
>gi|320034607|gb|EFW16551.1| DNA mismatch repair protein Msh5 [Coccidioides posadasii str.
Silveira]
Length = 933
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 218/787 (27%), Positives = 370/787 (47%), Gaps = 112/787 (14%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQII---------YTSTKS---- 60
VG SYY + ++L+++E D +++ +K +P I+ + +KS
Sbjct: 97 VGCSYYVADQKKLYIVEDIASGGMD--VVETLKLDVEPTILNFDFLITLKFGLSKSLGFE 154
Query: 61 -EESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
++ L++LK G+ + P LV + FS+E +
Sbjct: 155 RAKTKLTSLKLRQGSADIPKF-LVPGNAFSHEN-------------------------VQ 188
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
D+G Q G + L+ +R + +G+ + ID + SL + ++
Sbjct: 189 DAEDVGFTSQQ----GNFSYLQRKRSTQDFQGDSAGDQLLRIDKIEMSSLKSNMFINRDT 244
Query: 180 HEALQIFQTDKHPSHMGIGRAK------EGFSVFGMMNK-CVTPMGRRLLRNWFLRPILD 232
+LQI Q++ HP+ G + E S++G+ ++ T G+ +LR FLRP +
Sbjct: 245 LSSLQIIQSESHPNAFNQGPGQTSSSSKESLSIYGLFHRFARTSQGKTMLRQIFLRPTIH 304
Query: 233 LENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ R IS FL E + +A L ++LK +K++ ++ I T + K
Sbjct: 305 QSIISERHVFISTFLRVENADAVAKLTKSLKGIKNLRPVMIHLQKG--ISTGNARFRGFK 362
Query: 291 SICSLLHVNKIF-EVGISESLR-----EQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
S+ + F + I E+L+ E+L L +E A +L V ++ +
Sbjct: 363 SVVWATILEFAFHSIDIHETLKKIAGAEKLNLCAMHKLELA------KLHQVGRVIHETV 416
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH-LCKEMFVPCI 403
D+ S ++ T+VR G ELD+++++Y + L +VA LP L E+ V
Sbjct: 417 DLESSVQERR-TIVRPGVDQELDKMKEMYNGMESLLSDVAVTIAATLPEELSNELNV--- 472
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
+Y Q+G+ + I LD+ G + ++ + R ++ + E+D LGD+Y
Sbjct: 473 IYFPQLGFNIAI---PLDEQGRPVYDGGDEEWAQVFTTENRAYFKDFRMHEMDERLGDMY 529
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
I E I DL I + + L++A + E+D L+LA A +RP +T E +
Sbjct: 530 GNICAKEIEIVYDLAQSILGYEEILVEASDVCGEIDSLLALAHGADLYKLVRPQMTDENV 589
Query: 524 LDIQNGRHVLQEMTVDTFIPNDT------------------RIDNDGRIN--------II 557
+ I+ GRH+L E TV +++PNDT + D + + ++
Sbjct: 590 VIIKGGRHILHEATVSSYVPNDTFLVGGKGTERYQSPTDDPKYSGDSQASDCTGPSMLLL 649
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMI 609
TGPNYSGKS+Y+KQVALI++++HIGSFVPA AT+G+TD + ++ QS+F I
Sbjct: 650 TGPNYSGKSVYLKQVALIIYMAHIGSFVPAKTATIGVTDKILTRITSRETVSKTQSTFAI 709
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLT 668
DL Q+ + +T++SL ++DEFGKGT + DG+GL YF+ D PKV+ TH
Sbjct: 710 DLQQISFAVANSTNRSLIIIDEFGKGTESADGVGLACALFEYFLDLGDERPKVIGATHFH 769
Query: 669 ELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVP 728
E+L LP+ L+ M V S + I +LY G + S+G CA + G+
Sbjct: 770 EILENEFLPQRPELQLGHMEVQVDPAASELQDQITYLYNFRFGRSSESFGTICAAMNGID 829
Query: 729 AEVIKRA 735
++ RA
Sbjct: 830 LAIVSRA 836
>gi|358059938|dbj|GAA94368.1| hypothetical protein E5Q_01019 [Mixia osmundae IAM 14324]
Length = 865
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 234/784 (29%), Positives = 354/784 (45%), Gaps = 92/784 (11%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV MA R V DS+ L + E +D L+ I++ Q +P ++ STK+E
Sbjct: 45 QVIMAVHEIRGRTAVVQLDSNSGTLLISEDAQDGPHRDLLVSILE-QYKPSLVLISTKAE 103
Query: 62 ESFLSALKRS-DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNS 120
S ++++ G + TV+ + FS E L+ L + + +
Sbjct: 104 LSLSEKVQQTLSGWSATATVETRPAKEFSVETGRAALLELDLPK------------HAPA 151
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
D+ S + SG + + AS I S+ + L+ L++ +
Sbjct: 152 SPDVSSSEESDQSG-----------LSHISSARPRVASSKISSIELMPLSSVLQISTHSL 200
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
ALQ+F + H + + ++F ++N + GR LR W +RP LD + +R
Sbjct: 201 VALQVFASGSHAAGRNDASTAKMPNLFDVINTTRSAAGRTTLRQWIIRPSLDTHVIQARQ 260
Query: 241 NAISFFLCSEEL--MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
AI+ FL E L M L LK V+ +L+K T + W A + S L V
Sbjct: 261 TAIACFLRPENLHIMYDLRSCLK-VQQAASVLEKLRCGQGNATPT-WRAITTMLSSALQV 318
Query: 299 NKIFEVGISESLREQL----RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
REQL L ++ + A+ + EL L+I I D E G+
Sbjct: 319 ------------REQLLGLTHLQTSALLFQIANSVNVEL--FEALLITIEDRIDWHESGF 364
Query: 355 -GTL-VREGFCDELDELRQIYEELPEFLEEVASLELVQL-PHLCKEMFVPCIVYIHQIGY 411
G L ++ G +LD+ RQ Y LP L VA VQ+ P +C + V VY Q+GY
Sbjct: 365 QGKLCIQNGVNAQLDQYRQQYASLPNDLSHVARHLSVQISPDVCDALNV---VYFPQLGY 421
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL-FYHTPKTRELDNLLGDIYHKILDME 470
L + + D L G+ + FS T+ ++ T + ++LD GD+ I D+E
Sbjct: 422 LCSLTLKAGQDPKQLDLPGWTYQFS-----TECFSYWKTSEMQDLDEQYGDLASMISDLE 476
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
I +L + + L A + +LD + LA A + + RP++T + +L I+ GR
Sbjct: 477 IDIVEELTAQVMSAETILHDATHLLGQLDALVCLADAAKRLAWSRPVITSDNVLRIRQGR 536
Query: 531 HVLQEMTVDTFIPNDT---------------------RIDNDGRINIITGPNYSGKSIYI 569
H + E +D +I NDT R+D D + I+TG N+SGKS+Y+
Sbjct: 537 HAVLETLLDRYIGNDTSLVAGNGLHTGEDESSETSDSRMDVDRSVMILTGSNFSGKSVYV 596
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
K VALIV L+H+GS++PAD A +GLTD + T S F+ DL QV MLR A
Sbjct: 597 KAVALIVLLAHVGSYIPADNAIIGLTDRILTRVQTRESATNPASLFVSDLQQVSYMLRNA 656
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSE 680
T +SL L DEFGKGT T DGI L G + + P+ ++ TH L
Sbjct: 657 TPRSLLLADEFGKGTETNDGISLFCGLVEHLCQRGTDCPRTILTTHYASAFQTNMLQLER 716
Query: 681 R-LKFYTMSVLRPENNSTDVED--IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
R + M++ D ED IV+LY+L G A S+ L CA G+P+ +I RA
Sbjct: 717 RGVLLAQMAITFAGAMPDDDEDAEIVYLYQLAKGVATESHALACAAQFGLPSHLIARARE 776
Query: 738 VLEA 741
V A
Sbjct: 777 VSAA 780
>gi|303320297|ref|XP_003070148.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109834|gb|EER28003.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 907
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 211/776 (27%), Positives = 364/776 (46%), Gaps = 116/776 (14%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYT---------STKSEESF 64
VG SYY + ++L+++E +D+V+ +Q ++ Y + ++
Sbjct: 97 VGCSYYVADQKKLYIVEDIASGG-----MDVVETYSQFRLPYHLEVRPIQEFGFERAKTK 151
Query: 65 LSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE-RICYLNSMMD 123
L++LK G+ + P LV + FS+E A D G + ++ + YL ++D
Sbjct: 152 LTSLKLRQGSADIPKF-LVPGNAFSHENAED--------AEDVGFTSQQGELLYLAGIVD 202
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
M + V V +G L+A L+ +R + +G+ + ID + SL + ++ +L
Sbjct: 203 MENHVSVGCAGALIAYLQRKRSTQDFQGDSAGDQLLRIDKIEMSSLKSNMFINRDTLSSL 262
Query: 184 QIFQTDKHPSHMGIGRAK------EGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENL 236
QI Q++ HP+ G + E S++G+ ++ T G+ +LR FLRP + +
Sbjct: 263 QIIQSESHPNAFNQGPGQTSSSSKESLSIYGLFHRFARTSQGKTMLRQIFLRPTIHQSII 322
Query: 237 NSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ R IS FL E + +A L ++LK +K++ ++
Sbjct: 323 SERHVFISTFLRVENADAVAKLTKSLKGIKNLRPVM------------------------ 358
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
+H+ K G + R ++ I+E +L V ++ +D+ S ++
Sbjct: 359 -IHLQKGISTG-NARFRGFKSVVWATILEAMHKLELAKLHQVGRVIHETVDLESSVQERR 416
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH-LCKEMFVPCIVYIHQIGYLM 413
T+VR G ELD+++++Y + L +VA LP L E+ V +Y Q+G+ +
Sbjct: 417 -TIVRPGVDQELDKMKEMYNGMESLLSDVAVTIAATLPEELSNELNV---IYFPQLGFNI 472
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
I LD+ G + ++ + R ++ + E+D LGD+Y I E I
Sbjct: 473 AI---PLDEQGRPVYDGGDEEWAQVFTTENRAYFKDFRMHEMDERLGDMYGNICAKEIEI 529
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
DL I + + L++A + E+D L+LA A +RP +T E ++ I+ GRH+L
Sbjct: 530 VYDLAQSILGYEEILVEASDVCGEIDSLLALAHGADLYKLVRPQMTDENVVIIKGGRHIL 589
Query: 534 QEMTVDTFIPNDT------------------RIDNDGRIN--------IITGPNYSGKSI 567
E TV +++PNDT + D + + ++TGPNYSGKS+
Sbjct: 590 HEATVSSYVPNDTFLVGGKGTERYQSPTDDPKYSGDSQASDCTGPSMLLLTGPNYSGKSV 649
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLR 619
Y+KQVALI++++HIGSFVPA AT+G+TD + ++ QS+F IDL Q+ +
Sbjct: 650 YLKQVALIIYMAHIGSFVPAKTATIGVTDKILTRITSRETVSKTQSTFAIDLQQISFAVA 709
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
+T++SL ++DEFGKGT + D PKV+ TH E+L LP+
Sbjct: 710 NSTNRSLIIIDEFGKGTES---------------AGDERPKVIGATHFHEILENEFLPQR 754
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
L+ M V S + I +LY G + S+G CA + G+ ++ RA
Sbjct: 755 PELQLGHMEVQVDPAASELQDQITYLYNFRFGRSSESFGTICAAMNGIDLAIVSRA 810
>gi|241954422|ref|XP_002419932.1| MutS homolog, putative [Candida dubliniensis CD36]
gi|223643273|emb|CAX42147.1| MutS homolog, putative [Candida dubliniensis CD36]
Length = 802
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 178/641 (27%), Positives = 324/641 (50%), Gaps = 65/641 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+DS+ S + +D + ALQI + + I + S++ ++N VT G +
Sbjct: 168 VDSLEFCSFQDIMFIDVDSLYALQILPETRK--SLNINSKSQKLSLYDLLNNTVTIEGAK 225
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSF 278
LL++W +P+ D+ L SR N + SE E+ +++ + LKY K+ I+ +
Sbjct: 226 LLKDWVRKPLTDITKLLSRQNTVKILSSSELHEIRSNIRKGLKYTKNCKSIVNGLEAGKS 285
Query: 279 IYTASDWTAFLKSICSLLHVNKIFEVGISES--------LREQLRLLNFDIVEKAASCIT 330
+ W + + ++++++K + SE+ Q +++F+ +EK
Sbjct: 286 SWKV--WKNLILFLQNVMYLSKQIRLCFSETNMPPELALFYNQELMIDFNELEKFI---- 339
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ 390
L+Y + + E+ + G D LDELR Y L E L+E + +
Sbjct: 340 --LSYAEPI---------TSEEDNKMRIINGIDDTLDELRIQYNNLEELLQETTGIIAAK 388
Query: 391 LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD----DTTLEQLQGFEFAFSDMDGETKRLF 446
+E+F VYI Q+G+L+ K D DTT + + ++ + ++
Sbjct: 389 FS---EEVFNT--VYIPQLGFLV---SRKADIENADTTFMPDE-----WQEVFRTSTNIY 435
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
Y T + +LD GDIY I D E I + +++ + F+ +++ A ELDC SL+
Sbjct: 436 YKTEEVWQLDEQFGDIYTLINDREIEIIQSMLAKVSEFNTVIIQVGEAAIELDCLCSLSE 495
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKS 566
V+ NY+ P +T L+I GRH L E + F+PN+T + + +I ++TG N SGKS
Sbjct: 496 VSQYRNYVFPCITDTNELEIIQGRHPLVETFSNMFVPNNTIFEPEEKIMVVTGANLSGKS 555
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMML 618
+Y+ Q ALIV ++ IG VPA+ AT+G+ D + + +QS+F ID++Q+ +
Sbjct: 556 VYLNQTALIVVMAQIGCAVPAEKATLGIVDKILTRISSRESLDKQQSTFAIDVYQLSKCI 615
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF----VTCDVPPKVLVCTHLTELL--N 672
AT +SL ++DEFGKG+ D + GGT++YF + C P+ + TH +L
Sbjct: 616 SLATDRSLVIVDEFGKGSDPIDSTSMFGGTLSYFGKKSLDC---PRCIFSTHFLDLFKDK 672
Query: 673 EGC-LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E C + +S + K + +L + ++ ++++ +LY++ PG A S+G++CA + G+P V
Sbjct: 673 ELCEMYQSRKTKMMSTEILLEKTTNSSLDNVTYLYKVKPGLAEKSFGIYCAKVCGIPQNV 732
Query: 732 IKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLA 772
I+RA + + N + V + +S +++Q + +K++
Sbjct: 733 IQRAECIAQMLNNGEDV-AYELTRLSEEEEQNYSVAKKVVT 772
>gi|322801420|gb|EFZ22081.1| hypothetical protein SINV_04943 [Solenopsis invicta]
Length = 786
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 215/778 (27%), Positives = 360/778 (46%), Gaps = 133/778 (17%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
Q+ +A I +++G +YY+ +L V++ D + F + + Q QP+ + T +
Sbjct: 56 QIILAMIWSSNQLGAAYYNILTSELFVMDDTYDDGAHFNIARALYKQCQPRHVITISGMS 115
Query: 62 ESFLSALKR---SDGTTE--------------APTVKLVKSSIFSYEQAWHRLIYLRVTG 104
+ FL+AL+ S+ + E ++++++ +++ +HR+ L++
Sbjct: 116 DEFLTALETLVTSEVSDEDRRESSGSSGAGPSQVSLRVLRKREHGFDRCYHRVRCLKLQP 175
Query: 105 MDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
+ ER+ +L +++ S V + A G LL ++ + SG S S+
Sbjct: 176 EPANANNVERLIFLQGLLNFKSIVMIHALGLLLIYIDQHW--SNIALDPSGRPSFA--SL 231
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPS-HMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
V+L +T +HP+ +MGI
Sbjct: 232 TNVTL-----------------KTLRHPTRNMGI-------------------------- 248
Query: 224 NWFLRPILDLENLNSRLNAISFFLC--SEELMASLHETLKYVKDIPH-ILKKFNSPSFIY 280
LN R I F L ++ ++ +L LK++ + + IL K+++
Sbjct: 249 ------------LNERFEVIEFCLNPDNQSIVENLTSCLKHIYRLTNVILDKYSAQQ--A 294
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+DW K++ S++++ I E RE++RL + K IT E+ YV +
Sbjct: 295 KVTDWRRLHKTVSSIIYI-----ADICEKHREKVRLFH-----KIVDSITKEVRYVKYFI 344
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ-LP---HLCK 396
I+D++ +K +VR LD L I LPE L ++ ++ + LP CK
Sbjct: 345 EYIVDLS-AKRSERDFIVRANVDSHLDNLHHIRNTLPEKLTQMGEKDMKEYLPVSVTTCK 403
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+VYI IGYL+ I LQ EF F + +Y +P +ELD
Sbjct: 404 ------MVYIPNIGYLLAITGWNPSPADNINLQNLEFKFVSNNIR----YYKSPSAKELD 453
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
+ +GDI +I E I LV +I + + A+ AELD L+ +VA ++NY++P
Sbjct: 454 DTIGDILLRINKRESYIILKLVKYINKHAPSIFNAIQLCAELDTLLAFHVVAREHNYVKP 513
Query: 517 ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGR--INIITGPNYSGKSIYIKQVAL 574
+ ++ ++ GRH LQE + TF+PNDT DG+ + I+TGPN SGKS Y+KQVAL
Sbjct: 514 NVVDRQIIAVEQGRHPLQEF-LTTFVPNDT-YSGDGKSLVKILTGPNASGKSTYLKQVAL 571
Query: 575 IVFLSHIGSFVPADAATVG--------LTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IVF++HIG FVPA +AT+G +T + S F+ D+ Q+ L +TS S+
Sbjct: 572 IVFMAHIGCFVPAKSATIGIVTHILTQITSVDSIALNTSMFLQDMRQINSALYSSTSNSI 631
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERL 682
+LDEFG GT G+ LL +N FV C P + V TH+ ++N LP++ +
Sbjct: 632 VILDEFGNGTSEVSGLSLLAAVLNNFVERGPNC---PHIFVATHMHRVMN--MLPQNPII 686
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ T + E+ S + +LY L G S+ A AG+ +++KRA V E
Sbjct: 687 EEQTFEFITNEDGS-----VAYLYSLTSGRVGRSFAHAAARSAGLDEKIVKRALEVYE 739
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 310/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++K+ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNKNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLASKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I E S L+E FDI++ +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILEKFNSRLLKEICE--KFDILQD-----------IYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERFIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ + I+
Sbjct: 525 ELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAETNRYIKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I ++ I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIDIGSENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K + ++ Y +SV E
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMKGVRNYNVSVEERE---- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
+DI+FL ++VPG A SYG+ + LAG+P +++RA +L + +N+K + + EN S
Sbjct: 757 --DDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLENDKAI-KSELENAS 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|448528833|ref|XP_003869761.1| Msh5 protein [Candida orthopsilosis Co 90-125]
gi|380354115|emb|CCG23628.1| Msh5 protein [Candida orthopsilosis]
Length = 789
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 222/792 (28%), Positives = 372/792 (46%), Gaps = 64/792 (8%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFP--LIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
+GV+ D R+L+V +ED +P +D + P II+ S++ ES ++ L RS
Sbjct: 31 LGVTCLDVENRKLYV---YEDIEVSYPNIYVDAIIDDLGPDIIFVSSRCTESMIT-LVRS 86
Query: 72 DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQ-- 129
TV VK + Y ++ H+ + S ++ I ++S + M + ++
Sbjct: 87 LEVDRNLTV-FVKI-VSEYTKSDHQSL---------AQSFEKYIGTVSSRLFMNAALKSP 135
Query: 130 -VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
+ S G L N ++ + + + +DSV + + +D + ALQI T
Sbjct: 136 YYKISMGTL----NAIYLEISDYTDVQCLAEMVDSVESCNYKNLMFVDVDSLYALQI-DT 190
Query: 189 DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC 248
D H + + S+F +N T G LLR+W +P+ +L+ + R +
Sbjct: 191 DSHTNKVSKNSIN---SLFDFLNHTATREGYLLLRDWVRKPLANLKLIEERQALVKVLSL 247
Query: 249 S--EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+E S+ + L +K +++ + ++ + W + L + + + + K+ + I
Sbjct: 248 ESFKESRKSVFKLLSQLKGSFRKIRRLRTNELLWNS--WKSLLLFLSNSVQIVKLLRLYI 305
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
+ L NF S E + + ++ II++ S E+G V G +E+
Sbjct: 306 ATLGVGTLPGFNF---RALLSDDVLEFRKLSDAILSIIELESSSEEG-KVRVLSGVDEEI 361
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLE 426
D+LR IY +L L+ +L + F VYI Q+G+L+ I D TT
Sbjct: 362 DQLRVIYNDLESILQNCTE----ELMATHNQNFNT--VYIPQLGFLVSI-----DVTTSS 410
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
+ + +Y K +ELD GD++ I D E I + L + + +
Sbjct: 411 SDLDLPIEWEQVFATPTNAYYKCNKVQELDEKFGDVHTLINDREIEIIQGLQEEVLDYEE 470
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT 546
+L ++ ELDCF SLA V+ N+ P LT L I+NGRHVL E + ND
Sbjct: 471 KILDVMDGLVELDCFCSLAEVSAFPNFNFPTLTDGLELQIENGRHVLLESCSKLVVSNDI 530
Query: 547 RIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------K 598
N R+ IITG N+SGKSI++ Q ALIV L+ IG +PA A +G+ D +
Sbjct: 531 EYKNKERMIIITGANFSGKSIFLNQTALIVVLAQIGCAIPATCAVIGMVDKLLTRISSRE 590
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP 658
+ QS+F ID++Q+ + T +SL ++DEFGKG+ + D LLGGT+ YF + +
Sbjct: 591 SLEKRQSTFAIDINQLSKCIDHKTERSLVIIDEFGKGSDSIDSPALLGGTLVYFASQNDC 650
Query: 659 PKVLVCTHLTELLNEGC----LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
P+ ++ TH EL LP+ ER+KF + V+ +N+ TD I +LY++VPG
Sbjct: 651 PRCIISTHFMELFRGNLIVDRLPQ-ERVKFLSTQVIL-QNDQTDRTSITYLYKIVPGICD 708
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQY---KNAVEKML 771
S+G+HCA + G+P+ +I RA + K + + ++Q Y ++ V K L
Sbjct: 709 NSHGIHCAKVCGIPSTIIARAKEIGHKLDEGKDLVNEMTLLTAHEEQNYSIARDVVMKFL 768
Query: 772 AFDVLKGDLRLF 783
A D + D F
Sbjct: 769 ALDFSEADRTTF 780
>gi|3831701|gb|AAC70065.1| MutS homolog [Caenorhabditis elegans]
Length = 933
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 195/675 (28%), Positives = 329/675 (48%), Gaps = 61/675 (9%)
Query: 85 SSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENER 144
++ F +A RL + D ++ +++ + D+ + +R+ G LL L+ R
Sbjct: 194 NNFFRMSRAIERLKAM-AGSHDSSMTEEDKYIIIKMRFDIEAVNMIRSFGALLLFLDETR 252
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD-KHPSHMGIGRAKEG 203
+ T + + + I S+ +L +++D +AL I + ++ G GR
Sbjct: 253 MGVT---DDPLSVTSPIKSIKTFTLGNLVEIDFNTIQALDILPKETENKKTFGQGR---- 305
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMASLHETLK 261
S++ +M+KC + +G++ LR WF P D ++L SR + +F + E+ A L L
Sbjct: 306 -SLYQLMDKCRSTVGKKCLRKWFRNPTTDRDDLVSRQKCVHYFKQDWNAEVTAKLSSILG 364
Query: 262 YVKDIPHILKKFNSPS--FIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLN 318
VK + + +KF S + I+ W F+ ++ +L+ + N I + IS+ + LL
Sbjct: 365 RVKALNSVFQKFQSGTAQLIH----WECFVSTVNALVEILNIIRQTPISKEFPVESDLLR 420
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
E++ + + II+ SK +G T V G +ELDE+R YE +P
Sbjct: 421 -------------EVSEIAVIAGSIINFAESKIQGRVT-VMNGIDEELDEIRDTYENMPM 466
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
L +A E +L L V C VYI +G+++ + D +E +S
Sbjct: 467 VLTAIAKQEEARL-GLPPYSNVAC-VYIPLVGFVLSVPR----DYGVESQPDMTLLYSTH 520
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+ L T LD+ GDI +++D + AI L + + ++K ++ A+ +
Sbjct: 521 ED----LRVRNATTSRLDDEFGDILMRLIDSQTAIILTLKTRVMKKKRSIIKLLSIASRI 576
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPNDTRIDNDG-RINI 556
D +S L+A QN + P L EP+++ H + + V +F+PN DG + +I
Sbjct: 577 DVLISFGLIAAQNGWNCPALVDEPVIEAVELYHPISVLVVKKSFVPNQVSSGRDGIKASI 636
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAEQ-----SSFM 608
ITGPN GKS+Y+K + ++VFLSHIGSFVPA A +G+ D ++ T + S+F
Sbjct: 637 ITGPNACGKSVYMKSIGIMVFLSHIGSFVPARHAKIGIVDRIVTRMFTVDSVLDGMSTFA 696
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT--CDVPPKVLVCTH 666
D+ QV + LR+AT SL ++DEFGKGT+TE G+ LL + Y++ D P + + +H
Sbjct: 697 KDVEQVALALRKATGNSLVIIDEFGKGTMTEVGLSLLASVMTYWMNRGADRCPHIFLSSH 756
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
L N L ++ F T +VLR I +L+R+ PG S+ L A G
Sbjct: 757 FHALPNYIPL-ETNIATFLTFTVLREAGGK-----IKYLFRMTPGLVDCSFALSVAKEEG 810
Query: 727 VPAEVIKRAAYVLEA 741
+P VI RA + +A
Sbjct: 811 IPPPVIGRACRIYKA 825
>gi|17539736|ref|NP_502531.1| Protein MSH-5 [Caenorhabditis elegans]
gi|52783755|sp|Q19272.2|MSH5_CAEEL RecName: Full=MutS protein homolog 5
gi|8515837|gb|AAF76200.1| MSH-5 [Caenorhabditis elegans]
gi|13548316|emb|CAA98059.2| Protein MSH-5 [Caenorhabditis elegans]
Length = 1369
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 195/675 (28%), Positives = 329/675 (48%), Gaps = 61/675 (9%)
Query: 85 SSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENER 144
++ F +A RL + D ++ +++ + D+ + +R+ G LL L+ R
Sbjct: 194 NNFFRMSRAIERLKAM-AGSHDSSMTEEDKYIIIKMRFDIEAVNMIRSFGALLLFLDETR 252
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD-KHPSHMGIGRAKEG 203
+ T + + + I S+ +L +++D +AL I + ++ G GR
Sbjct: 253 MGVT---DDPLSVTSPIKSIKTFTLGNLVEIDFNTIQALDILPKETENKKTFGQGR---- 305
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMASLHETLK 261
S++ +M+KC + +G++ LR WF P D ++L SR + +F + E+ A L L
Sbjct: 306 -SLYQLMDKCRSTVGKKCLRKWFRNPTTDRDDLVSRQKCVHYFKQDWNAEVTAKLSSILG 364
Query: 262 YVKDIPHILKKFNSPS--FIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLN 318
VK + + +KF S + I+ W F+ ++ +L+ + N I + IS+ + LL
Sbjct: 365 RVKALNSVFQKFQSGTAQLIH----WECFVSTVNALVEILNIIRQTPISKEFPVESDLLR 420
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
E++ + + II+ SK +G T V G +ELDE+R YE +P
Sbjct: 421 -------------EVSEIAVIAGSIINFAESKIQGRVT-VMNGIDEELDEIRDTYENMPM 466
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
L +A E +L L V C VYI +G+++ + D +E +S
Sbjct: 467 VLTAIAKQEEARL-GLPPYSNVAC-VYIPLVGFVLSVPR----DYGVESQPDMTLLYSTH 520
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+ L T LD+ GDI +++D + AI L + + ++K ++ A+ +
Sbjct: 521 ED----LRVRNATTSRLDDEFGDILMRLIDSQTAIILTLKTRVMKKKRSIIKLLSIASRI 576
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPNDTRIDNDG-RINI 556
D +S L+A QN + P L EP+++ H + + V +F+PN DG + +I
Sbjct: 577 DVLISFGLIAAQNGWNCPALVDEPVIEAVELYHPISVLVVKKSFVPNQVSSGRDGIKASI 636
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAEQ-----SSFM 608
ITGPN GKS+Y+K + ++VFLSHIGSFVPA A +G+ D ++ T + S+F
Sbjct: 637 ITGPNACGKSVYMKSIGIMVFLSHIGSFVPARHAKIGIVDRIVTRMFTVDSVLDGMSTFA 696
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT--CDVPPKVLVCTH 666
D+ QV + LR+AT SL ++DEFGKGT+TE G+ LL + Y++ D P + + +H
Sbjct: 697 KDVEQVALALRKATGNSLVIIDEFGKGTMTEVGLSLLASVMTYWMNRGADRCPHIFLSSH 756
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
L N L ++ F T +VLR I +L+R+ PG S+ L A G
Sbjct: 757 FHALPNYIPL-ETNIATFLTFTVLREAGGK-----IKYLFRMTPGLVDCSFALSVAKEEG 810
Query: 727 VPAEVIKRAAYVLEA 741
+P VI RA + +A
Sbjct: 811 IPPPVIGRACRIYKA 825
>gi|302391923|ref|YP_003827743.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
gi|302204000|gb|ADL12678.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
Length = 893
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 294/586 (50%), Gaps = 58/586 (9%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S ++ LDA L++ +T + S+ G S+ ++++ VT MG R L+ W
Sbjct: 265 STKDYMTLDANTRRNLELTKTIRDQSYKG--------SLLWVLDQTVTAMGGRKLQKWLE 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P+LD+E +N+RL+A+ + L L + L V D+ ++ K S A D A
Sbjct: 317 QPLLDVEGINNRLDAVGELKDNIFLKEELKDNLTEVYDLERLMSKITYGS--ANARDLIA 374
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
SI +L +++E L ++ AA + T L V+EL+ I
Sbjct: 375 LKTSIANL------------PAIKELLTQFESSKLKSAADKLDT-LEDVHELIESSIKEE 421
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G +++ G+ +ELDE RQ E ++ +A+LE + + +H
Sbjct: 422 PPTTVTEGDIIKTGYDEELDEFRQAMNEGKDW---IANLEKEEKERTGIKSLKVGFNKVH 478
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + LD L + ++R Y TP+ +E ++ + K +
Sbjct: 479 --GYYIEVTKANLD------LVPDNYERKQTLSNSER--YITPELKEKESKILGAEEKSV 528
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + ++ + K + A+LD SLA VA NNY P + ++DI+
Sbjct: 529 ELEYQLFTEIREKVAQETERVQKVADIVAQLDVLASLAEVAINNNYCHPEVNASDVIDIE 588
Query: 528 NGRH-VLQEM-TVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+GRH V++EM ++F+PND+ ID D R IITGPN SGKS Y++QVAL+V +S IGSF
Sbjct: 589 DGRHPVVEEMLEEESFVPNDSYIDCDQDRFLIITGPNMSGKSTYMRQVALMVLMSQIGSF 648
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
+PAD A +G+ D S +T QS+FM+++++V +L AT SL +LDE G+GT
Sbjct: 649 IPADEAKIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANILNNATQNSLVILDEVGRGT 708
Query: 637 LTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T DG+ + Y ++ K L TH EL E LP +K Y ++V E
Sbjct: 709 STYDGLSIAWAVTEYISDQSNIGAKSLFATHYHELTELESKLPG---VKNYNVAV--KEE 763
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
S DI FL ++VPG A SYG+ A AGVP VI RA VLE
Sbjct: 764 GS----DITFLRKIVPGKANDSYGIEVAKRAGVPKSVIDRANEVLE 805
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 867
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 309/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++K+ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNKNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLASKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I E S L+E FDI++ +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILEKFNSRLLKEICE--KFDILQD-----------IYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERFIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ + I
Sbjct: 525 ELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAETNRYIKPIVDYSDRIVIT 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I ++ I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIDIGSENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K + ++ Y +SV E
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMKGVRNYNVSVEERE---- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
+DI+FL ++VPG A SYG+ + LAG+P +++RA +L + +N+K + + EN S
Sbjct: 757 --DDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLENDKVI-KSELENAS 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 866
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 311/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++K+ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNKNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLSSKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I + R RLL DI EK + L +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILQ-------RFSSRLLK-DIYEKFDT-----LQDIYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPEKYIRKQTLANAER--------YVTPELKEIEEAILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ I L + + A +D +S A VA N Y +PI+ + I+
Sbjct: 525 ELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISFAEVAETNRYTKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I + I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIEIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K + ++ Y +SV E+
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMKGVRNYNVSVEERED--- 757
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL ++VPG A SYG+ + LAG+P +++RA +L++ +N+ V ++ EN +
Sbjct: 758 ---DIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILKSLEND-TVIKFELENAA 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 310/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++K+ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNKNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLSSKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I + R RLL DI EK + L +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILQ-------RFSSRLLK-DIYEKFDT-----LQDIYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERYIRKQTLANAER--------YVTPELKEIEEAILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ I L + + A +D +S A VA N Y +PI+ + I+
Sbjct: 525 ELEYQLFNEIREKIELQIVRIQDTAKYIATIDVLISFAEVAETNRYTKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I + I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIEIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K + ++ Y +SV E
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMKGVRNYNVSVEERE---- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
+DI+FL ++VPG A SYG+ + LAG+P +++RA +L++ +N+ V ++ EN +
Sbjct: 757 --DDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILKSLEND-TVIKFELENAT 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|297677726|ref|XP_002816790.1| PREDICTED: mutS protein homolog 5 isoform 1 [Pongo abelii]
Length = 533
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 285/555 (51%), Gaps = 51/555 (9%)
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
LH L ++K++P ILK+ SDW K++ S L + SL + ++
Sbjct: 5 LHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQ 57
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L DI ++ + +L ++ L+ ++D S + T V E+DE ++
Sbjct: 58 LFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMG 111
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFE 432
LP FL EVA EL L + +P ++YI IG+L+ I + + + ++ G +
Sbjct: 112 LPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLD 166
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
F F ++L Y + +T+ELD LLGD++ +I D E + L + + L + +
Sbjct: 167 FMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVL 222
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND 551
+ A+ LD L+LA A Y RP + L + IQNGRH L E+ TF+PN T D
Sbjct: 223 DLASRLDVLLALASAARDYGYSRPRYSPRVLGVRIQNGRHPLMELCARTFVPNSTECGGD 282
Query: 552 -GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTA 602
GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+ + ++
Sbjct: 283 KGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISL 342
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVP 658
S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+ LL + Y++ TC
Sbjct: 343 GLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRYWLARGPTC--- 399
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
P + V T+ L+ LP+ +++ TM D D+VF Y++ G A S+
Sbjct: 400 PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGNDLVFFYQVCEGVAKASHA 453
Query: 719 LHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG 778
H A AG+P E++ R V + ++ K ++ Q + + V+K + D+
Sbjct: 454 SHTAAQAGLPDELVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDP 513
Query: 779 --DLRLFF-QDLLPS 790
DL +F Q++LP+
Sbjct: 514 NLDLNVFMSQEVLPA 528
>gi|194381732|dbj|BAG64235.1| unnamed protein product [Homo sapiens]
Length = 533
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 286/555 (51%), Gaps = 51/555 (9%)
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
LH L ++K++P ILK+ SDW K++ S L + SL + ++
Sbjct: 5 LHRLLGHIKNVPLILKRMKLSH--TKVSDWQVLYKTVYSALGLRDA-----CRSLPQSIQ 57
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L DI ++ + +L ++ L+ ++D S + T V E+DE ++
Sbjct: 58 LFR-DIAQE----FSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPEIDEKKRRLMG 111
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDTTLEQLQGFE 432
LP FL EVA EL L + +P ++YI IG+L+ I + + + ++ G +
Sbjct: 112 LPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMVEASDFEINGLD 166
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
F F ++L Y + +T+ELD LLGD++ +I D E + L + + L + +
Sbjct: 167 FMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLARAAVLTRVL 222
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND 551
+ A+ LD L+LA A Y RP + + L + IQNGRH L E+ TF+PN T D
Sbjct: 223 DLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRHPLMELCARTFVPNSTECGGD 282
Query: 552 -GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTA 602
GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+ + ++
Sbjct: 283 KGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISL 342
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV----TCDVP 658
S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+ LL + +++ TC
Sbjct: 343 GLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRHWLARGPTC--- 399
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
P + V T+ L+ LP+ +++ TM D D+VF Y++ G A S+
Sbjct: 400 PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGNDLVFFYQVCEGVAKASHA 453
Query: 719 LHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG 778
H A AG+P +++ R V + ++ K ++ Q + + V+K + D+
Sbjct: 454 SHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDKFMKLDLEDP 513
Query: 779 --DLRLFF-QDLLPS 790
DL +F Q++LP+
Sbjct: 514 NLDLNVFMSQEVLPA 528
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 308/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++++ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNRNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLERLASKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I E S L+E I EK + L +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILEKFNSRLLKE--------ICEKFDT-----LQDIYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERYIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ + I+
Sbjct: 525 ELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAETNRYIKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I + I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIDIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K ++ Y +SV E+
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMRGVRNYNVSVEERED--- 757
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL ++VPG A SYG+ + LAG+P +++RA +L + +++K V + EN S
Sbjct: 758 ---DIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLESDK-VIKSELENAS 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 307/602 (50%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++++ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNRNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLSKEHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLERLASKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I E S L+E I EK + L +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILEKFNSRLLKE--------ICEKFDT-----LQDIYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G +++ G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKGGYNEIVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERYIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ + I+
Sbjct: 525 ELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAETNRYIKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++F+ ND I + I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESFVANDIDIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K + ++ Y +SV E+
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMKGVRNYNVSVEERED--- 757
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL ++VPG A SYG+ + LAG+P +++RA +L + +N+K + + EN S
Sbjct: 758 ---DIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLENDKVI-KSELENAS 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/602 (29%), Positives = 308/602 (51%), Gaps = 61/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A + L+I +++++ S G S+ G+++K VTPMG RLL+ W P
Sbjct: 263 NSYMGLDSNAIKNLEILESNRNKSKKG--------SLLGVLDKTVTPMGGRLLKKWLEEP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L+ E++++RL A+ + L + L + D+ + K S D+ +
Sbjct: 315 LLNKEHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLERLASKIVYQSI--NPKDFISIK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L ++ +I E S L+E I EK + L +YEL+ I + S
Sbjct: 373 LSLQNLPYIKEILEKFNSRLLKE--------ICEKFDT-----LQDIYELIDKSIKDDPS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 420 TQLKEGNIIKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 472
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 473 VFGYYIEVTKSNIPQVPERYIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 524
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ + I+
Sbjct: 525 ELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAETNRYIKPIVDYSDRIVIK 584
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ ++++ ND I + I IITGPN +GKS Y++QVALIV ++ IGSFVP
Sbjct: 585 EGRHPVIETISDESYVANDIDIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVP 644
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 645 ASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTST 704
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG K ++ Y +SV E+
Sbjct: 705 YDGMSIAHAVIEY-IHEKIKAKTLFATHYHELTKLEG---KMRGVRNYNVSVEERED--- 757
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL ++VPG A SYG+ + LAG+P +++RA +L + +++K V + EN S
Sbjct: 758 ---DIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLESDK-VIKSELENAS 813
Query: 758 AQ 759
Q
Sbjct: 814 QQ 815
>gi|388581000|gb|EIM21311.1| hypothetical protein WALSEDRAFT_57633 [Wallemia sebi CBS 633.66]
Length = 1091
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 215/809 (26%), Positives = 359/809 (44%), Gaps = 142/809 (17%)
Query: 47 YQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTV-KLVKSSIFSYEQAWHRLIYLRVTGM 105
+Q QP IY S + F+ +K + + +L FSYE + R++ L + G
Sbjct: 243 HQLQPNEIYCSLTVPDGFIKVIKLFIANVKPDALLQLAPWKEFSYESSKSRILQLSI-GS 301
Query: 106 D--------------------DGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERI 145
D D + + + YL+ ++ + + A G L+ VL+
Sbjct: 302 DSHLDSTSQPSWVDPLGQMESDTMDSRLKEMYLSGFINFNYRLSIGAIGCLILVLQRHIA 361
Query: 146 VDTLEQKESGNASI---TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKE 202
D+ S + + + + ++K +++D A AL +F +++H S + +KE
Sbjct: 362 QDSATTITSASCRVEDLDLSGLETWQIDKVMQIDNDALMALSVFSSEQHAS-IHSNNSKE 420
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA------SL 256
G S+F ++++ T +G +LL+ +P D+ N+N RL+AI+ + + + A SL
Sbjct: 421 GLSLFNLLSETKTHVGTQLLQRRLRQPSCDISNINDRLDAIAILIHPQNVSAVNDMRMSL 480
Query: 257 HETLKYVKDIPHILKKFNSP-----------SFIYTASDWTAFLKSICSLLHVNKIFEVG 305
+ K V ++ H+L S + + + + ++ +L I +VG
Sbjct: 481 SKVGKGV-NVMHVLNSMKSGKTSIRSFKCLVNLVILTEELYEGIAALAALESKQLITDVG 539
Query: 306 ISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDE 365
++ L+ + +I + IT+ ID N SK + + ++ G DE
Sbjct: 540 ---TINPILKAFDINICHTVKNVITS-----------TIDFNDSKAE-HRLIITTGLDDE 584
Query: 366 LDELRQIYEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMC--IFEEKLDD 422
LD LRQ + EL FL +VA + P ++ E+ V VY QIGYL+ I ++
Sbjct: 585 LDNLRQQFNELDSFLVQVAQEIHEETPSNIANEINV---VYFPQIGYLIALDIVNNGYEN 641
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
+ G E A+ L++ + + RELD LGD+ I D E I +L H+
Sbjct: 642 IEDRDMIGAEIAWEYQFMTEMTLYFKSDRMRELDYHLGDMATLIADRETEIIYELTQHVL 701
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFI 542
+S+ L +ELD L++ V+ + + +P++T P++ I NGRH LQE+ V TF+
Sbjct: 702 GYSNELSIMAENISELDVLLAMTRVSEVHGFSKPLMTDNPMIRISNGRHPLQELCVRTFV 761
Query: 543 --------------------------------------PNDTRI------------DNDG 552
PN R D
Sbjct: 762 QNDTHLKKSLEMRVKIDDDIDIIESRKITPFSAVVPMTPNKQRSGTLSNVVQNKMQDIAH 821
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---------------- 596
IITG N SGKS+Y+KQV LIV L+ IG +VPA++AT+G+ D
Sbjct: 822 STMIITGANGSGKSVYLKQVGLIVILAQIGCYVPAESATIGIIDKLFSYGSVHTCNVQRI 881
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
SKH+ A QS+FMIDL QV +R AT +SL L DEFGKGTL DG G+ +INY +
Sbjct: 882 IIKSKHLEAMQSAFMIDLAQVTHAMRNATGRSLVLWDEFGKGTLPSDGAGIFAASINYLM 941
Query: 654 ----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
C P ++ TH +L + + + M V +N+ + + L++L
Sbjct: 942 RRGENC---PFIIATTHFNDLWENSYIKLAASVVITHMRVKISKNDEGNTT-LTHLHKLE 997
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ S CAL +P +++ +A ++
Sbjct: 998 LELSEDSGAFDCALSNNIPIDIVDKARHI 1026
>gi|358389106|gb|EHK26699.1| hypothetical protein TRIVIDRAFT_218842 [Trichoderma virens Gv29-8]
Length = 806
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 201/692 (29%), Positives = 328/692 (47%), Gaps = 75/692 (10%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
++ S++D+ S + +G + L R + + S + + S+ +L+ +
Sbjct: 158 KLIRCGSLIDLDSVASLSCAGAIFTELHRRRSLASCSGSSSAESLFDVRSITMFNLSDHV 217
Query: 174 KLDATAHEALQIFQTDKHPSHMGIG------RAKEGFSVFGMMNKCV-TPMGRRLLRNWF 226
+ + +LQI + HP+ KE SV+G+++ TP GR LR+ F
Sbjct: 218 FIGEESLLSLQIINHESHPNSQAWNVDSKSSAEKENLSVYGLLHPLASTPQGRAHLRHMF 277
Query: 227 LRPILDLENLNSRLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
L P +L + R IS L +EE L+ L++F S S
Sbjct: 278 LNPTSNLRIITDRQRTISMLLEPKNEEKTRRASSILR-----KGTLRRFASQSL------ 326
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE-LAYVYELVIGI 343
K+ EV I+ S Q I+ K IT + L V +++ +
Sbjct: 327 ---------------KLREVAIAFSDTNQ-----GSIIRKIIDGITPQALTRVGDMIDRV 366
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
++ +K + + V+ G ELDEL++ Y+ + L EVA+ LP + CI
Sbjct: 367 VNFEETKSQQRYS-VKPGIDVELDELKRQYDGMNSLLTEVANHVAQDLPIWARRHIRSCI 425
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS-DMDGETKRLFYHTPKTRELDNLLGDI 462
++ Q+G+L + ++ Q G F DG K+ F + + + D+
Sbjct: 426 -FLPQLGFLTVVEQDS-------QQSGRRFDVECTGDGLWKKSFTNNESAYYKNRHMMDL 477
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
+ +++ + + D+++H + LL A E D L+LA+ A + + P +T
Sbjct: 478 DDQEVEVMQKLAVDIIAH----ENTLLAAATICGEFDALLALAIGAAKYGWNAPQMTTAN 533
Query: 523 LLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN-------IITGPNYSGKSIYIKQVALI 575
+ I GRH LQE+ +FIPND I +D ++TGPN SGKSIYIKQVA+I
Sbjct: 534 TIHITGGRHPLQELLTPSFIPNDCYIGDDSTTPGHPVQALVLTGPNQSGKSIYIKQVAVI 593
Query: 576 VFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V+L+HIGSFVPAD A +G D + ++ S+F +DL QV ++ +TS+SL
Sbjct: 594 VYLAHIGSFVPADEAVIGTVDKILTRISSQESVSGTGSTFALDLKQVSHAMKYSTSRSLV 653
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYT 686
+LDEFG GT +DG G+ ++YF+ + + PKVL TH +E+ G L + ++L
Sbjct: 654 ILDEFGNGTTADDGAGMFTAMLDYFLSSAEQSPKVLAATHFSEVFANGYLERYDQLALAH 713
Query: 687 MSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE-AAQN 744
M V R + ++ D ED + +L++LV G++ S G CAL++GVP EV RA + + +QN
Sbjct: 714 MDV-RIDLDAVDAEDKVTYLFKLVEGYSSTSLGSQCALISGVPEEVTNRAEAIGKLLSQN 772
Query: 745 NKHVERWSHENISAQD-QQYKNAVEKMLAFDV 775
WS N D VE+ L D+
Sbjct: 773 EDLTYIWSKVNDRETDFNHVYQEVEEFLNLDL 804
>gi|255721555|ref|XP_002545712.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136201|gb|EER35754.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 666
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 290/596 (48%), Gaps = 41/596 (6%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
FL +D + ALQ+ + H + S+F ++N VT G +LL++W +P++
Sbjct: 37 FLFIDVDSLYALQVLPDSRKSLHSKTITKSQKNSLFELLNNTVTKEGAKLLKDWIRKPLV 96
Query: 232 DLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
D + + R I E ++ ++ + L K+I +K + ++ ++W
Sbjct: 97 DRDKIKERQQIIQLLASPENSDVRYNIRKCLTGTKNITLTIKGLQTGKQVW--NNW---- 150
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
K+I S L + E + D + S I +L+ + E ++ ++ S
Sbjct: 151 KNIISFLQNTTGISKHVKNCYAETKGISPPDALSIFMSPIIIQLSQLQEFIVQYVEPITS 210
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+E G ++ G +LD+++ Y +L L+E + P + VYI Q+
Sbjct: 211 EEDGRVRILN-GIDQDLDDMKIQYNDLDRILQETTRSIASKFPDTDQTFNT---VYIPQL 266
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR----LFYHTPKTRELDNLLGDIYHK 465
G+L+ + E +Q SD E R ++Y + + LD GDIY
Sbjct: 267 GFLV---------SREEDIQSVALFVSDEWQEVFRTSTNVYYKSEEVLFLDQEYGDIYTL 317
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
I D E I ++++ + + D +L+ A ELDC+ SLA VA NNY+ P +T + L+
Sbjct: 318 INDREIEIIQEILEKVLEYEDSILEIARAAVELDCYCSLAEVAQLNNYIFPRITNDLQLE 377
Query: 526 IQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
I GRH L E + F+PNDT + +I ++TG N SGKS+Y+ Q LIV ++ IGS +
Sbjct: 378 IIQGRHPLVETHSNLFVPNDTVFEQVEKIMVVTGANLSGKSVYLNQTGLIVIMAQIGSAI 437
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+AT+G+ D + + QS+F ID+ Q+ + + +SL ++DEFGKG+
Sbjct: 438 PADSATIGIVDKILTRISTRESLDKNQSTFAIDIFQLSKCISLCSGRSLVIVDEFGKGSD 497
Query: 638 TEDGIGLLGGTINYFVTCDVP--PKVLVCTHLTELLNEGCLP---KSERLKFYTMSVLRP 692
D L G + YF + + P+ L TH +L + L +S K + +L
Sbjct: 498 HTDSTALFGACLKYFESLGLQNCPRCLFSTHFLDLFKDIQLSEKFQSSMFKLVSTEILLE 557
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+NN E + +LY++ G A S+G++CA + G+P EVI RA Y+ + +N +
Sbjct: 558 KNND---ESVTYLYKVKQGIAAKSFGIYCAKICGIPQEVISRAEYIADKLENGDDI 610
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 299/600 (49%), Gaps = 60/600 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A L+I +++++ S G S+ G++++ VTPMG RLL+ W P
Sbjct: 262 NSYMGLDSNAIRNLEILESNRNKSKKG--------SLLGVLDRTVTPMGGRLLKKWLEEP 313
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++D + + RL+A+ + L E L V D+ + K S T D+ +
Sbjct: 314 LIDKDEIEKRLDAVEELFNNYRERIELKELLNKVYDLERLASKIVYQSV--TPKDFISIK 371
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L + I S L+E L+ L VYEL+ I + S
Sbjct: 372 LSLQNLPKIKNILSKFSSRLLKEIYEKLDV-------------LQDVYELIDKSIKDDPS 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIH 407
+ G ++++G+ + +D+LR+ E ++ E E + +L I Y
Sbjct: 419 NQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEAEEREKTGIKNLR-------IGYNK 471
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ A ++ Y TP+ +E++ + K++
Sbjct: 472 VFGYYIEVTKSNIPQVPDRYIRKQTLANAER--------YVTPELKEIEETILGAEEKLI 523
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
++E + ++ + L + + A +D +S A VA N Y++PI+ E + I+
Sbjct: 524 ELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAETNKYVKPIVDYEDRIVIK 583
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ ++ + F+ ND I + I IITGPN +GKS Y++QVALIV ++ +G FVP
Sbjct: 584 EGRHPVVETISDEGFVANDIDIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQVGCFVP 643
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + A QS+FM+++ +V +L ATS+SL +LDE G+GT T
Sbjct: 644 ASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSKSLIILDEVGRGTST 703
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y + + K L TH EL EG L ++ + +SV E+
Sbjct: 704 YDGMSIAQAVIEY-IHEKIKAKTLFATHYHELTKLEGKL---RGVRNFNVSVEERED--- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL+++VPG + SYG+ + LAG+P +I+RA +LEA + +K V+ E +S
Sbjct: 757 ---DIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEALEKDKAVKNELEEAVS 813
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/589 (28%), Positives = 297/589 (50%), Gaps = 72/589 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L+ F+ LD L++ ++ R + S+ +++ T MG R+LRNW +
Sbjct: 265 LSNFMPLDDRTRRNLELIEST---------RGDKSLSLLAVLDHTSTAMGARMLRNWINQ 315
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++ E++ +RLN + F+ E + E LK V D+ + + +
Sbjct: 316 PLISKESIENRLNRVQEFVAHSEARERIREALKQVSDLERLANRLVQKTITPRE------ 369
Query: 289 LKSIC-SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
L+S+ SL + ++ ++ +++ Q+ + NF ++ +L++ + +
Sbjct: 370 LRSLALSLEKIPELVQILQQCNMQLQVSIHNFQ--------------HIVDLILSALVDD 415
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
+G GT++REG+ ELD LR ++ +ASLE KE I +
Sbjct: 416 PPAVRGSGTIIREGYSQELDRLRSASTNAKQW---IASLER-------KEREATGIKNL- 464
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIY 463
+IGY K+ +E F+ D + L + TP+ +E ++L+ +
Sbjct: 465 RIGY------NKVFGYYIEVTNSFKHLVPDRYIRKQTLVGAERFITPELKEYESLILNSQ 518
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
+ +E + +L++ I + + AE+DC++SLA A ++ Y+RPI++ + +
Sbjct: 519 TEAETIEEQLLDELITRIAGEAGKIFSTARQIAEIDCYVSLAEAAVRHQYVRPIVSEDDV 578
Query: 524 LDIQNGRHVLQEMTV-DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHI 581
++I+ GRH + E+ + F+PND +D + ++ I+TGPN +GKS Y++QVALI ++ I
Sbjct: 579 IEIKGGRHPVVELRASEGFVPNDAFLDQETHQVLILTGPNMAGKSTYLRQVALITLMAQI 638
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPAD+A +G+ D + + QS+FM+++ + +L T +SL +LDE G
Sbjct: 639 GSFVPADSARIGIVDRIFTRVGAQDDIASGQSTFMVEMTETAYILAHCTPKSLVILDEIG 698
Query: 634 KGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
+GT T DG+ + + Y + L TH EL + E LP R+K + M VL
Sbjct: 699 RGTSTYDGMAIAQAVVEYLHNNTRTRARTLFATHYHELTSLEEFLP---RVKNFRMEVLE 755
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N D+VFL ++VPG A SYG+H A LAG+P VI+RA +L+
Sbjct: 756 EGN------DVVFLRKVVPGGADKSYGIHVAKLAGIPKSVIRRAQELLK 798
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 173/598 (28%), Positives = 300/598 (50%), Gaps = 56/598 (9%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD+ A L+I +++++ S G S+ G++++ VTPMG RLL+ W P
Sbjct: 265 NSYMGLDSNAIRNLEILESNRNKSKKG--------SLLGVLDRTVTPMGGRLLKKWLEEP 316
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++D + + RL+A+ + L E L V D+ + K S T D+ +
Sbjct: 317 LIDKDEIEKRLDAVEELFNNYRERIELKELLNKVYDLERLASKIVYQSV--TPKDFISIK 374
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L + I S L+E L+ L VYEL+ I + S
Sbjct: 375 LSLQNLPKIKNILSKFSSRLLKEIYEKLDV-------------LQDVYELIDKSIKDDPS 421
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G ++++G+ + +D+LR+ E + +A+LE + + I Y
Sbjct: 422 NQLKEGNIIKDGYNEMVDKLRKASTEGKNW---IANLEADEREKTGIKNL--RIGYNKVF 476
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + + + ++ A ++ Y TP+ +E++ + K++++
Sbjct: 477 GYYIEVTKSNIPQVPDRYIRKQTLANAER--------YVTPELKEIEETILGAEEKLIEL 528
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + ++ + L + + A +D +S A VA N Y++PI+ E + I+ G
Sbjct: 529 EYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAETNKYVKPIVDYEDRIVIKEG 588
Query: 530 RH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
RH V++ ++ + F+ ND I + I IITGPN +GKS Y++QVALIV ++ +G FVPA
Sbjct: 589 RHPVVETISDEGFVANDIDIGPENPIMIITGPNMAGKSTYMRQVALIVLMAQVGCFVPAS 648
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G+ D S + A QS+FM+++ +V +L ATS+SL +LDE G+GT T D
Sbjct: 649 YARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSKSLIILDEVGRGTSTYD 708
Query: 641 GIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDV 699
G+ + I Y + + K L TH EL EG L ++ + +SV E+
Sbjct: 709 GMSIAQAVIEY-IHEKIKAKTLFATHYHELTKLEGKL---RGVRNFNVSVEERED----- 759
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI+FL+++VPG + SYG+ + LAG+P +I+RA +LEA + +K V+ E +S
Sbjct: 760 -DIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEALERDKAVKNELEEAVS 816
>gi|400592604|gb|EJP60738.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 827
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 283/589 (48%), Gaps = 77/589 (13%)
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMM-NKCVTPMGRRLLRNWFLRPILDLENLNS 238
H Q +QT+ G + KEG SV+GM N T GR LR FLRP D+ + +
Sbjct: 221 HPNSQTWQTN-----FGAAK-KEGLSVYGMFHNLASTSQGRLQLRKLFLRPSTDIFTITA 274
Query: 239 RLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFN------SPSFIYTASDWTAFLK 290
R IS L + E ++ + L+ V D+ +L K + S S+ + W A +
Sbjct: 275 RHRTISILLQHQNSEALSQMVSALRRVPDMIEVLSKLSRGISLTSMSYFSSGGLWAALER 334
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
+++ V+ + G L N + CI +
Sbjct: 335 FSSNVMEVHML--TGSLSGCESAPLLRNL----RGRYCILS------------------- 369
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
G +LD+L++ Y+ + +FL +V + ++ CI ++ Q+G
Sbjct: 370 ----------GVDPDLDQLKRRYDGMEDFLTQVIDKIIENTASWARQYIRSCI-FLPQLG 418
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSD----MDGETKRLFYHTPKTRELDNLLGDIYHKI 466
+L+ I LD+TT + E D M + Y T + ELD GDIY +I
Sbjct: 419 FLLVI---DLDETTGQGKYSGEGQSHDTWEKMFTADGSVCYKTKQMHELDEAYGDIYSQI 475
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
D E + L ++ +S L+ A + ELD L+LAL A + + P + + I
Sbjct: 476 GDREVELLHKLALNVLEYSSQLMLASQLSGELDAILALALGAQKYGWTEPDIIRDGHTRI 535
Query: 527 QNGRHVLQEMTVDTFIPND--TRIDNDG------RINIITGPNYSGKSIYIKQVALIVFL 578
GRH L E ++ FIPND T +D +G R+ ++TGPN+SGKS+Y+KQVALI++L
Sbjct: 536 VGGRHPLHEASMQHFIPNDFGTPVDEEGSDQKSGRVLVVTGPNHSGKSVYLKQVALIIYL 595
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+H GSFVPAD A V +TD + + +S+F DL +V + QAT++SL L+D
Sbjct: 596 AHTGSFVPADKAAVTVTDKILVCIPAQESASLNESAFAADLKKVLHSVTQATNKSLVLVD 655
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVP--PKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
EFGKGT +G GL G +++F++ P+V++ TH E+L +E L+ M
Sbjct: 656 EFGKGTCPVNGAGLAAGLLDHFLSLGSRQCPRVIIATHFHEILELDYFSSNEALRLAHME 715
Query: 689 V-LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
V ++ ++ TD E + +L+ L G S+G CA + VP V+KRA
Sbjct: 716 VKVKHDDIGTDDEPLTYLFLLQRGKTSFSFGEQCATMNRVPGAVVKRAG 764
>gi|397644698|gb|EJK76509.1| hypothetical protein THAOC_01722, partial [Thalassiosira oceanica]
Length = 886
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 236/882 (26%), Positives = 388/882 (43%), Gaps = 161/882 (18%)
Query: 5 MACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFP-LIDIVKYQAQPQIIYTSTK---- 59
+A G R+ + Y+ ++ + S +D ++ V + QP +I S +
Sbjct: 42 LAVYEQGSRIAFACYNEESNEIIFEDARSSSGTDTERVVGAVLAETQPNLILVSNRVIAN 101
Query: 60 ------------SEESFLSALKRSDGTTEAPTV----------------KLVKSSIFSYE 91
EE +A++R DG EA + +L+KSS F
Sbjct: 102 APLLECLTTMPVGEEGRSTAMRRGDGNAEAKSADEQQQQQHTTGESIPYQLLKSSAFEPR 161
Query: 92 QAWHRLIY-LRV-TGMDDGLS---------------------IKERICYLNSMMDMGSEV 128
Q +++ LRV T M +S L S++D S
Sbjct: 162 QCKSVILHKLRVMTLMSRAMSGHHPEDFSHSQALSGHYASTQAPSNYHSLASVIDFESPT 221
Query: 129 QVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNK-FLKLDATAHEALQIFQ 187
VRA G LL L T + E G ++TI+++ ++ FL+L+A + L+IF
Sbjct: 222 LVRALGALLTYLRQ-----TAFRLEEG-FTVTINNIRRCPASESFLRLEAASFRTLRIFA 275
Query: 188 TDKHP-------SHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
TD HP ++KEGFS++ ++++ + GR LR W +P+ D + R
Sbjct: 276 TDHHPLVANNNVKGRSYNQSKEGFSLYTLLDRTKSKAGRERLRQWMTQPLRDAAKIRQRH 335
Query: 241 NAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
AI FL E ++ + E L V + IL + S +D+ ++ +L
Sbjct: 336 TAIDLFLHPECHPAVSLVLERLSDVVSMDAILMRMQRCS--TQPNDFLVLIR----MLDA 389
Query: 299 NKIFEVGISESLREQLRLLN----FDIVEKAASC-------ITTELAYVYEL-------- 339
+S LRE+ +L+ F+ + A + +AY+ +L
Sbjct: 390 AYAIVSTLSGDLREKAYMLDREAGFNGMADDAGGEGELNKELYPSVAYIDDLLRRCHVPV 449
Query: 340 -------VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
+I +IDV + E ++ G+ DELD ++ +E L E L EV L +
Sbjct: 450 TRDLREKMIAVIDVEITSETKDHVIINWGYHDELDRAKETFETLDETLSEVGRQVLQKHQ 509
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
L + + +G+L+ I KR H T
Sbjct: 510 EL---------ISLKVVGFLISI--------------------------DKRQHNHDEAT 534
Query: 453 RELDNLLGD---IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
++ D ++ ++ D E + +L I L + ++LDC LSLA A
Sbjct: 535 NTFPSVPDDFEFVFTQVKDTEAMVVSNLEEEILEVESELRSTFSALSDLDCILSLAGCAA 594
Query: 510 QNNYMRPILTL--EPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSI 567
N+++P + E + I+NGRH LQE+ VD FIPNDT++D+D R+ ++TGPN+SGKS
Sbjct: 595 DLNFVKPEIAAEGEGAIQIENGRHPLQELIVD-FIPNDTQMDSDRRMLVVTGPNFSGKSC 653
Query: 568 YIKQVALIVFLSHIGSFVPADAAT--------VGLTDSKHMTAEQSSFMIDLHQVGMMLR 619
Y +QV ++V++ H+GSF+P D+A VG D + QS+F DL + ++R
Sbjct: 654 YARQVGVLVYMLHLGSFLPCDSARISLFDQILVGFADVESCAVPQSTFQRDLTAIAGIMR 713
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
+AT ++L L+DEFGKGT GI ++ I C + +V TH E+ + G L
Sbjct: 714 KATPKTLALIDEFGKGTAPASGIAVMVSAIQQL--CKKKCRAVVTTHFLEMFSLGLLEDG 771
Query: 680 E-RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ +K MSV PE+ +D V L++L G A S GL A LAG+ +V+ RA +
Sbjct: 772 KGSVKAVQMSVFVPESED---DDAVPLFKLEDGVASSSAGLVVARLAGLNKKVVNRADGI 828
Query: 739 LEAAQNNKHVERWSHE-NISAQDQQ-YKNAVEKMLAFDVLKG 778
++A ++ + V+ N ++ Q K+A+ LA D G
Sbjct: 829 IQALRSGRQVKPLPESLNCNSPFQPGVKSAIRLFLAVDGWTG 870
>gi|196008907|ref|XP_002114319.1| hypothetical protein TRIADDRAFT_58009 [Trichoplax adhaerens]
gi|190583338|gb|EDV23409.1| hypothetical protein TRIADDRAFT_58009 [Trichoplax adhaerens]
Length = 706
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 211/375 (56%), Gaps = 22/375 (5%)
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
+ G +F F D +Y +P T+ELD LGD ++LD E I L + D
Sbjct: 338 IDGLDFMFVSNDVA----YYKSPLTKELDESLGDTQCRLLDKEIEIMLQLQEVVLQHKDD 393
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPND 545
+L + AELDC ++L ++A QNN++RP LT + I+ GRH LQE +D FIPND
Sbjct: 394 ILSLLEKIAELDCLIALTILAKQNNFIRPKLTEANKIAIKKGRHPLQECCLDPGKFIPND 453
Query: 546 TRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS------- 597
T I + RINIITGPN SGKS+Y+KQV LIV+++HIGSFVPA+ A +G++D
Sbjct: 454 TYIEEQKDRINIITGPNASGKSVYLKQVGLIVYMAHIGSFVPAEEAEIGISDRIYTRIQT 513
Query: 598 -KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
+ ++ S+F I+L ++ L AT +SL L+DEFGK T DG+ L I +++
Sbjct: 514 HETISVNLSAFAIELTEIATSLMGATEKSLILIDEFGKFTSPIDGLSLTIAIIEFWLEKR 573
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
PPK+L+ TH T + LP+S+ LK+ TM L ++N I +LY+L+ G + S
Sbjct: 574 CPPKILISTHFTSIQKHNILPQSDLLKYQTMDTLIEKDN------IAYLYQLLDGLSSRS 627
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVL 776
H A +A +P V+ R + EA + R E+ + + + Y V++ L D+
Sbjct: 628 LAYHVAAVAHIPTHVLSRGREIAEAIIQGDAITRSGSESTAERLKIYSTIVDRFLETDLE 687
Query: 777 KGDLRLFFQD-LLPS 790
D+ F Q+ ++P+
Sbjct: 688 NSDMINFLQNYVIPA 702
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 110/273 (40%), Gaps = 74/273 (27%)
Query: 3 VYMACILHGHRVGVSYYDSSIRQLHVLEVWED--SNSDFPLIDIVKYQAQPQIIYTSTKS 60
+ M+ ++GV++YD+ + ++ + D DF ++ Q P I+ T +
Sbjct: 67 IIMSVCWKSSQLGVAFYDA---ETCIINMCADIVETEDFTMLRKAITQIDPDIVLTFARQ 123
Query: 61 EESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYL--RVTGMDDGLSIKERICYL 118
+ AL+ S E A HR+ L R+ D L I+E + +
Sbjct: 124 DTKIYQALEAS-------------------ESAKHRIGSLLSRIRNQSDMLEIEE-LMTI 163
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
++ + + + A GGL+ LEN+
Sbjct: 164 SAKLSFNNVTMISAIGGLITFLENK----------------------------------- 188
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
H + Q+ +++ H + + + FS+ G+M+ + + R WF+RPI ++ L
Sbjct: 189 -HGSNQLSESEAHIHVVDL----QMFSLAGVMH-----IDKHTFRLWFIRPICEMNALRK 238
Query: 239 RLNAISFFLCSEE--LMASLHETLKYVKDIPHI 269
R + IS+FL ++ + LH ++ +++I I
Sbjct: 239 RYDVISYFLGVQQYDVAMELHLHIRKIRNISTI 271
>gi|28210987|ref|NP_781931.1| DNA mismatch repair protein MutS [Clostridium tetani E88]
gi|44888200|sp|Q895H2.1|MUTS_CLOTE RecName: Full=DNA mismatch repair protein MutS
gi|28203426|gb|AAO35868.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 881
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 185/631 (29%), Positives = 311/631 (49%), Gaps = 82/631 (12%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L+I +T + S G S+ +++KC T MG RL+RNW +P++
Sbjct: 257 YLSMDINSRRNLEITETIRDKSRKG--------SLLWVLDKCSTAMGARLIRNWVEQPLI 308
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ E ++ RLNA+ + + L L + LK + DI I+ K +S + A + + S
Sbjct: 309 NKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNV--NAKELLSLKNS 366
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
I L ++ I ++ ++ L L+ EL +YEL+ I N
Sbjct: 367 IEKLPYIKDILSKLEADLFKDMLSNLD-------------ELKDIYELLESSIMDNPPIT 413
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQI 409
G L++ GF E+DELR E++ E + E + L + Y
Sbjct: 414 IKDGNLIKNGFNKEIDELRMAKSHGKEWIANLESSEREFTGIKSLK-------VGYNKVF 466
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + ++ + + + + +R Y TP+ +E+++ + K++ +
Sbjct: 467 GYFI-----EVTKSNISSVPEGRYVRKQTLSNCER--YITPELKEMEDKILGAEEKLISL 519
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + + + I D + + N A LDC SL+ VA +NNY +P + + I++G
Sbjct: 520 EYEVFVSIRNSIEKDIDRMKISANIVAILDCLSSLSTVALENNYSKPKILEGNDIIIKDG 579
Query: 530 RHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E + T F+ NDT +D D ++ +ITGPN +GKS Y++QVALI ++ IGSFVP
Sbjct: 580 RHPVVEKMIPTGSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVP 639
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A++ L D S ++A +S+FM+++ +V +L+ ATS+SL +LDE G+GT T
Sbjct: 640 AKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTST 699
Query: 639 EDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y ++ K L TH EL+ K + +K Y++SV +
Sbjct: 700 FDGLSIAWAVIEYICNNKNLRSKTLFATHYHELIQ--LENKIKGVKNYSVSVKEMD---- 753
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK----------- 746
+DIVFL +++ G A SYG+ A LAG+P +VI RA +L + + NK
Sbjct: 754 --KDIVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSIEQNKDNKIELDDIKE 811
Query: 747 ---HVERWSHENISAQDQQYKNAVEKMLAFD 774
H+E+ + + I A +K+LA D
Sbjct: 812 NKNHIEKENKKEI---------ATDKLLAND 833
>gi|322711602|gb|EFZ03175.1| DNA mismatch repair protein Msh5, putative [Metarhizium anisopliae
ARSEF 23]
Length = 1041
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 192/606 (31%), Positives = 293/606 (48%), Gaps = 90/606 (14%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHP-SHMGIGR-----AKEGFSVFGMM-NKCVTPMGRR 220
+L ++ L + + LQI Q+ HP S GR KEG S++G+ TP GR
Sbjct: 354 ALENYVALGSETLQTLQIIQSKIHPNSQYWGGRMQSQDQKEGLSIYGLFQGHSHTPQGRA 413
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LR RP+ ++ + R AIS FL L + I L K + + IY
Sbjct: 414 KLRRLISRPVSNVSIIEDRQQAISLFL--------LPRNADKTRHIIGALGKIRN-AKIY 464
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
L H+ K G + + FD L + EL+
Sbjct: 465 --------------LEHLQK----GTG-----NITIPKFD---------QDSLVAIGELI 492
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+D +S+ +G T VR G LDELR+ Y+ + FL E+ + +P
Sbjct: 493 SHTVDFEQSEYRGR-TTVRLGLDRNLDELRRHYDGMNSFLAEIVVSTIQTVPQWAVSYIR 551
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQG-------FEFAFSDMDGETKRLFYHTPKTR 453
CI ++ Q+G+L I + T + +G +E F D +Y R
Sbjct: 552 SCI-FLPQLGFL--IVTDVDPRTGKGKYRGNWPDEDHWELLFVADDSA----YYKNDNMR 604
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
LD+ GD+Y KI D E I L + S+ L A + ++ L+LAL A + +
Sbjct: 605 HLDDQFGDVYCKIADREVEILHVLSQEVLKSSECLSVASDACGNVNVILALALTAEKYKW 664
Query: 514 MRPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRI-----------DNDGRINIITGPN 561
P LT +L+I+ GRH LQE+ V +F+PND ++ N R ++TGPN
Sbjct: 665 SVPKLTTRSGILEIKKGRHPLQELVVPSFVPNDCQLGGGGHNDDDSCQNQSRCMVLTGPN 724
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQ 613
+SGKS+++KQV LIV+L+HIGSFVPA+ A + +TD + + E+S+F IDL Q
Sbjct: 725 HSGKSVFLKQVGLIVYLAHIGSFVPAEMAVISVTDRILTRISTLESVCKEESAFAIDLKQ 784
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN 672
+ + Q+TS+SL ++DEFGKGT ++DG GLL + + + V P+ LV TH+ +L
Sbjct: 785 LLNAIEQSTSKSLLIIDEFGKGTNSDDGAGLLASFLEHLSSLAVRAPRSLVATHIHDLF- 843
Query: 673 EGC---LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
GC LP S L+ M VL+ + + + I +L++L G++ +G +CA L GVP
Sbjct: 844 -GCHQLLPTSG-LQIAHMDVLKAQCGEFNCDYITYLFKLRDGYSSDLFGGYCATLNGVPN 901
Query: 730 EVIKRA 735
V++RA
Sbjct: 902 LVVERA 907
>gi|83815782|ref|YP_445727.1| DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855]
gi|123528693|sp|Q2S254.1|MUTS_SALRD RecName: Full=DNA mismatch repair protein MutS
gi|83757176|gb|ABC45289.1| DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855]
Length = 908
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 218/773 (28%), Positives = 361/773 (46%), Gaps = 119/773 (15%)
Query: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSD 72
R+G S+ D++ + V E D L D+++ A ++I K+E +
Sbjct: 148 RIGFSFIDATTGEFSVTEAGLDQ-----LQDLIQTVAPSEVIVDKRKTE-------RLQQ 195
Query: 73 GTTEAP-TVKLVKSSIFSYEQAWHRLI------YLRVTGMDDGLSIKERICYLNSMMDMG 125
E P TV + +F Y+ A+ L+ L+ G+DD MD+G
Sbjct: 196 HLREVPFTVTEQEDWVFKYDFAYQTLLEHFETHSLKGFGVDD--------------MDLG 241
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQ 184
V ASG L L E+ ++ + + S ++ + LD L+
Sbjct: 242 ----VVASGAALHYL-----------GETQKGALPHVRKIKRYSKDEHIALDPETKRNLE 286
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ Q+ + H G ++ ++++ TPMG R LR W +RP+ D+ + RL+A+
Sbjct: 287 LVQSIQDDGHEG--------TLVSILDETETPMGGRRLRAWLVRPLRDVGRIRHRLDAVE 338
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ L L E L + D+ + K + D A ++ L +V
Sbjct: 339 ACVDDRTLRDDLREELNQMGDLERLAGKVATGR--AAPGDLIAIKHTLRRLPNV------ 390
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELV----IGIIDVNRSKEKGYGTLVRE 360
L LL D A I +L E+V ++D +K G L+R+
Sbjct: 391 ---------LGLLT-DADSDALGAIEDDLRSCPEMVDRIQSALVDDPPAK-ISEGGLIRD 439
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI-VYIHQI-GYLMCIFEE 418
G+ +ELDELR I +E ++ VA+LE + + +P + V +++ GY + +
Sbjct: 440 GYSEELDELRTIAQEGKDW---VANLETEE----SERTDIPSLKVGFNKVFGYYIEVTNT 492
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
D + ++ S+ Y TP+ +E++ + KI +E+ + +L
Sbjct: 493 HADKVPEDYIRKQTLVDSER--------YVTPELKEMEEKILTAEEKIETLEQELFNELR 544
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
S I + L + A LDCF LA VA Q++Y RP + +DI+ GRH + E T+
Sbjct: 545 SQIAQQTGILQENAELLAHLDCFAGLAEVAEQHDYTRPSVDDGLTIDIEEGRHPVVEQTL 604
Query: 539 ---DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGL 594
D FIPND +D +D ++ IITGPN +GKS+ ++QV LIV L+ +GSFVPA+AA +G+
Sbjct: 605 PPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEAAQIGV 664
Query: 595 TD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLG 646
D S ++ A +S+F++++++ +L AT++SL L DE G+GT T DG+ +
Sbjct: 665 VDRIFTRVGASDNLAAGESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDGLSIAW 724
Query: 647 GTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y +V + L TH EL + ER+ Y + V E +IVFL
Sbjct: 725 AIVEYLHERPEVAARTLFATHYHEL--NAMADRLERVHNYRIQVSEHEG------EIVFL 776
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
+L+PG A SYG+ A +AG+P VI RA VL+ + ++H+E + E A
Sbjct: 777 RKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNLE-SQHLEVGADEADGA 828
>gi|294507623|ref|YP_003571681.1| DNA mismatch repair protein MutS [Salinibacter ruber M8]
gi|294343951|emb|CBH24729.1| DNA mismatch repair protein MutS [Salinibacter ruber M8]
Length = 903
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 216/775 (27%), Positives = 359/775 (46%), Gaps = 123/775 (15%)
Query: 13 RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSD 72
R+G S+ D++ + V E D L D+++ A ++I K+E +
Sbjct: 148 RIGFSFIDATTGEFSVTEAGLDQ-----LQDLIQTVAPSEVIVDKRKTE-------RLQQ 195
Query: 73 GTTEAP-TVKLVKSSIFSYEQAWHRLI------YLRVTGMDDGLSIKERICYLNSMMDMG 125
E P TV + +F Y+ A+ L+ L+ G+DD MD+G
Sbjct: 196 HLREVPFTVTEQEDWVFKYDFAYQTLLEHFETHSLKGFGVDD--------------MDLG 241
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQ 184
V ASG L L E+ ++ + + S ++ + LD L+
Sbjct: 242 ----VVASGAALHYL-----------GETQKGALPHVRKIKRYSKDEHIALDPETKRNLE 286
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ Q+ + H G ++ ++++ TPMG R LR W +RP+ D+ + RL+A+
Sbjct: 287 LVQSIQDDGHEG--------TLVSILDETETPMGGRRLRAWLVRPLRDVGRIRHRLDAVE 338
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ L L E L + D+ + K + T L +
Sbjct: 339 ACVDDRTLRGDLREELNQMGDLERLAGK------VATGRAAPGDL--------------I 378
Query: 305 GISESLREQLRLLNF--DIVEKAASCITTELAYVYELV----IGIIDVNRSKEKGYGTLV 358
I +LR +L D A I +L E+V ++D +K G L+
Sbjct: 379 AIKHTLRRLPNVLGLLADADSDALGAIEDDLRPCPEMVDRIQSALVDDPPAK-ISEGGLI 437
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI-VYIHQI-GYLMCIF 416
R+G+ +ELDELR I +E ++ VA+LE + + +P + V +++ GY + +
Sbjct: 438 RDGYSEELDELRTIAQEGKDW---VANLETEE----SERTDIPSLKVGFNKVFGYYIEVT 490
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
D + ++ S+ Y TP+ +E++ + KI +E+ + +
Sbjct: 491 NTHADKVPEDYIRKQTLVDSER--------YVTPELKEMEEKILTAEEKIETLEQELFNE 542
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L I + L + A LDCF LA VA Q++Y RP + +DI+ GRH + E
Sbjct: 543 LRDQIAQQTGILQENAELLAHLDCFAGLAEVAEQHDYTRPSVDDGLTIDIEEGRHPVVEQ 602
Query: 537 TV---DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
T+ D FIPND +D +D ++ IITGPN +GKS+ ++QV LIV L+ +GSFVPA+AA +
Sbjct: 603 TLPPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEAAQI 662
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
G+ D S ++ A +S+F++++++ +L AT++SL L DE G+GT T DG+ +
Sbjct: 663 GVVDRIFTRVGASDNLAAGESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDGLSI 722
Query: 645 LGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
+ Y +V + L TH EL + ER+ Y + V E +IV
Sbjct: 723 AWAIVEYLHERPEVAARTLFATHYHEL--NAMADRLERVHNYRIQVSEHEG------EIV 774
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
FL +L+PG A SYG+ A +AG+P VI RA VL+ + ++H+E + E A
Sbjct: 775 FLRKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNLE-SQHLEVGADEADGA 828
>gi|298242775|ref|ZP_06966582.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
gi|297555829|gb|EFH89693.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
Length = 936
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 286/595 (48%), Gaps = 74/595 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S N F+ LD L++F+T + S G S+ +++K +PMG RLLR W
Sbjct: 324 STNNFMTLDPYTRRNLELFETGRLNSVKG--------SLLWVLDKTHSPMGGRLLRRWIG 375
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P+LD+ L R IS L L A L E LK D+ ++ + I D A
Sbjct: 376 QPLLDIPTLQLRQQTISELLTDTLLQARLGEALKRAGDLERLINRVRQ--RIANPRDLVA 433
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLL-----NFDIVEKAASCITTELAYVYELVIG 342
+ + V + SE+ +RL+ N DI+E E A + E +
Sbjct: 434 LATGLHAAAEVRTCLDETASENAPSLVRLVDRLAENDDIIE------LIEKAIIEEPPVS 487
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
I + G ++R GF ELD+L++ + +++ E+ E K +
Sbjct: 488 INE---------GGIIRAGFSAELDKLKEASQNGRQWITELEQRER-------KRTGISN 531
Query: 403 --IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
+ + GY + I L+ E ++ S+ Y TP +E + L+
Sbjct: 532 LRVGFNKAYGYFIEITNANLNRAPTEYIRRQTLTNSER--------YITPDLKEYETLIL 583
Query: 461 DIYHKILDMERAITRDLVSHICLFS-DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ +I ME L S I + + + +L + AE+D FLSLA VA +++Y RP L
Sbjct: 584 NAQDRINKMENEFFTQLRSDIAIHAAERILDTAHAIAEIDVFLSLAEVAAKSDYCRPQLN 643
Query: 520 LEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIV 576
+ + I GRH V+++ DT FIPNDT I N + +I IITGPN +GKS Y++QVALI
Sbjct: 644 EDDTIHIVAGRHPVVEQAQTDTPFIPNDTDISNHEAQIAIITGPNMAGKSTYLRQVALIT 703
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGS+VPA++AT+G+ D + QS+FM+++ + +L AT +SL +
Sbjct: 704 LMAQIGSYVPAESATIGIVDRIFTRIGAQDDLATGQSTFMVEMVETANILHHATPRSLLI 763
Query: 629 LDEFGKGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
LDE G+GT T DG+ + + Y C + TH EL+ LP R++
Sbjct: 764 LDEIGRGTSTYDGLAIARAIVEYLHNNKRCGA--RTFFATHYHELVEVSKLLP---RIRC 818
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++V + ++FL ++VPG A SYG+H A LAG+P V+ RA +L
Sbjct: 819 LNVAVAEEDGK------VIFLRKIVPGGADRSYGIHVAQLAGIPRPVLHRAEEIL 867
>gi|269836700|ref|YP_003318928.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
gi|269785963|gb|ACZ38106.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
Length = 871
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 309/632 (48%), Gaps = 80/632 (12%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
G +RA+G LL L E V +L+Q I ++ S +++ LD L+
Sbjct: 232 GKPFAIRAAGALLQYL-AETQVGSLKQ---------IVDLVTYSTERYMSLDGQTRRNLE 281
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ ++ R + S+ ++++ TPMG R+LR W +P+LDL L R +A++
Sbjct: 282 LSESS---------RGERRHSLIAVLDQTRTPMGARMLRRWVGQPLLDLAELQDRQDAVA 332
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+F+ + A L + L +V D+ ++ + + + + + +S+ L +N+I
Sbjct: 333 YFVDRALVRARLRDALGHVSDLERLINRVVTGA--AGPRELLSLARSLQRLPEINEILGD 390
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G L V C T V LV V G G +R GF
Sbjct: 391 GDRPCL-----------VAGPPDCSETARLIVQALVDEPPAV-----LGGGPTIRAGFSP 434
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELD LR E E+ +A LE + + + + GY + + +
Sbjct: 435 ELDGLRASSREAREW---IAGLEQAERERTGIKSL--KVGFNKVFGYYIEVSRANISAVP 489
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+ ++ + ++ E Y TP+ +E ++ + + +I D+E + R +++ +
Sbjct: 490 SD----YQRKQTLVNAER----YITPELKEYESRVLNAEERIADLEEQVYRRVLAQVAAA 541
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FI 542
+D + A A+LD +LA VA + Y+RP L +L+I GRH + E+T++T F+
Sbjct: 542 ADSVRAAAQAVAQLDVLSALAEVAVRRRYVRPELDDSTVLEIVGGRHPVVEVTLETGQFV 601
Query: 543 PNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
PNDT +D + +I I+TGPN +GKS Y++QVALIV L+ IGSFVPA+ A +GL D
Sbjct: 602 PNDTYLDTESNQITILTGPNMAGKSTYLRQVALIVLLAQIGSFVPAERARIGLVDRIFTR 661
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF- 652
+ QS+FM+++ + +L AT +SL +LDE G+GT T DG+ + + +
Sbjct: 662 IGAQDDIATGQSTFMVEMVETATILHHATPRSLVVLDEIGRGTSTYDGLAIARAVVEHLH 721
Query: 653 ----VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
+ C K L TH EL E LP R++ Y + VL + +++VFL+R
Sbjct: 722 NSPRLGC----KTLFATHYHELTELEKILP---RVRNYRVDVLE------EGDEVVFLHR 768
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+VPG A SYG+H A LAG+P V++RA +L
Sbjct: 769 VVPGGADRSYGIHVAQLAGMPRAVVRRAGEIL 800
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 304/594 (51%), Gaps = 73/594 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+K+L LD+T + L+IF H +G K ++++ MNKC TPMG RLL+ W RP
Sbjct: 242 DKYLILDSTTLKNLEIF-------HNVLGEDK--YTLYHTMNKCETPMGARLLKRWMQRP 292
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D++ +N RL+A+ + L S+ L +KDI I
Sbjct: 293 LKDIDEINDRLDAVEELANKQLLQDSIRTILSRIKDIERI-------------------- 332
Query: 290 KSICSLLHVNKIFEVGISESLREQLRL-LNFD--IVEKAASCITTELAYVYELVIGIID- 345
K+ SL + + ESL++ +L +NF+ I++ +AS I Y E +I +I+
Sbjct: 333 KTRVSLGRAAPRDLISLKESLKQADKLRINFESKILKNSASKI-----YGIEGIIELIEN 387
Query: 346 -VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+N G G +++EG+ +ELDE+++I + ++ E K + I
Sbjct: 388 AINGDYPVGEG-VIKEGYNEELDEIKRIASNAKLLIGKMEERERRNTG--IKNL---KIG 441
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y +GY + + + L + S+ + T + +EL+ +
Sbjct: 442 YNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSER--------FVTDELKELEYKILSAKD 493
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+I ++E I RD++ + D + + A +D SLA VA + NY RP + +
Sbjct: 494 RIYEIENKIYRDILKKLGEMIDVIERTAKSIAIIDVISSLARVALEMNYTRPEVDESMDI 553
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+I+NGRH + E+ D F+PNDT I++D R I+TGPN +GKS Y++QVALIV L+ +GSF
Sbjct: 554 EIRNGRHPVVELYTD-FVPNDTHINSDARFIILTGPNMAGKSTYMRQVALIVILAQMGSF 612
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPAD A +G+ D S +T +S+FM+++ ++ +L AT +SL LLDE G+GT
Sbjct: 613 VPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGT 672
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ + +I + + + + TH L++ E L + ++ Y ++V ++
Sbjct: 673 STYDGLA-IAWSITEHIHNSIRARTIFATHYHHLIDLENVL---DNVRNYHIAVKETQDG 728
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
++F+ +++PG SYG+ A LAGVP +V+KRA +L + K +E
Sbjct: 729 ------LIFVRKVMPGGMSKSYGIEVAKLAGVPEKVVKRAKEILNLIEEEKVIE 776
>gi|310658532|ref|YP_003936253.1| DNA mismatch repair recognition factor [[Clostridium] sticklandii]
gi|308825310|emb|CBH21348.1| DNA mismatch repair recognition factor [[Clostridium] sticklandii]
Length = 853
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 286/570 (50%), Gaps = 63/570 (11%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+K+ S+F +++ T MG R+L+NW L P+ + +NSRLN I F + + +
Sbjct: 271 IRRSKKKGSLFWVLDDTKTAMGARMLKNWLLYPLKNETLINSRLNYIDLFFQNTDFTLKM 330
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLR 315
L ++ D+ I +K + S D +S ++ + K + E LR+ L+
Sbjct: 331 RNILNHISDLERICQKLSYDSI--KTDDILRLKESTSMIIELKKFMAMSEFELLRDFYLK 388
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
+ +L YV+EL+ I +N+ +++ F DEL ELR + +
Sbjct: 389 I--------------PDLEYVFELIDSSI-INKDFNSKEKYIIKSSFNDELSELRNLIDH 433
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
E + L + Q L + I Y GY + I T L+ F
Sbjct: 434 SAEMI-----LGVEQREKLRTGIKTLKIGYNKVFGYYIEI--------THANLKNF---- 476
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKIL-------DMERAITRDLVSHICLFSDHL 488
D+ + R T R + L + KIL +E+ I ++ + ++L
Sbjct: 477 -DIPSDYIRKQTLTNGERFISEELKLLEEKILTAKDKADSLEKHIFENIKMELKNHINNL 535
Query: 489 LKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVD-TFIPNDT 546
L A A LDC+ SLA VA+ NN++RP + + + ++NGRH V+++MT D F+PNDT
Sbjct: 536 LSASKVVAILDCYQSLATVANNNNFVRPEINNKGYIKLENGRHPVIEKMTSDYMFVPNDT 595
Query: 547 RIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
I+ DG I IITGPN +GKS Y++QVA+IV L+HIGSFVP A + L D S
Sbjct: 596 TIE-DGIIQIITGPNMAGKSTYMRQVAIIVLLAHIGSFVPCSKAEICLIDRIFTRIGASD 654
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP 658
++ QS+FM+++ +V +L+ A+S S +LDE G+GT T DG+ + I Y + +
Sbjct: 655 DLSQGQSTFMVEMIEVANILQNASSNSFIILDEIGRGTSTYDGMSIAFAVIKY-IEDQIK 713
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
K LV TH E+ S+ ++ Y+M V +N + FL ++V G A SYG
Sbjct: 714 AKTLVSTHYHEI--TSLEDSSKNIQNYSMLVEEVNDN------VNFLRKIVKGKADKSYG 765
Query: 719 LHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+H A+LA +P+++I A LE+ ++N V
Sbjct: 766 IHVAMLANLPSQIIDLAQDTLESLESNVSV 795
>gi|308807851|ref|XP_003081236.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus tauri]
gi|116059698|emb|CAL55405.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus tauri]
Length = 1622
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 234/839 (27%), Positives = 379/839 (45%), Gaps = 105/839 (12%)
Query: 1 MQVYMACILHGHRVGVSYYDSSIRQLHV---LEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
+ VY A G +G S YD L + +++ ED + + L + Q ++Y S
Sbjct: 816 LAVYAA---RGGTIGFSVYDRDANMLALTQGVDIAEDGDEEESLRTYIARTVQADVVYCS 872
Query: 58 ----TKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE 113
+K EE F R P V V +F + + L G G + +
Sbjct: 873 DELKSKLEEIFAREGDR------VPFVVGVTRRMFP--KPVESMNMLCNVG---GFASRG 921
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLE-NERIVDTLEQKESGNASITIDSVIEVSLNKF 172
+ + D S+ + A+G L++ ++ NE + L S +V E+S++ +
Sbjct: 922 ELASCVELHD--SDAAITAAGALISAMKKNEGLALAL--------STIPATVQELSISSY 971
Query: 173 LKLDATAHEALQIFQTDK-HPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+K+D + A+ IF D+ R K+ + ++ T G+RLL W RP+L
Sbjct: 972 MKIDPESLCAIGIFVPDEFREVSAKCERFKKDVNQI-FLDSVSTRGGKRLLETWMKRPLL 1030
Query: 232 DLENLNSRLNAISFFL---CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA- 287
++ L R + + + C + L + +L D IL KF + + + +DWT
Sbjct: 1031 NMPALQERRDCVEHLVKSGCVDVLRKGMTASL----DADTILMKFTTEAR-QSKTDWTRL 1085
Query: 288 --FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
F K+ S V + E+ + E+ + ++ C L + LV ID
Sbjct: 1086 ANFFKAASSFYDV--LCEMYLDETTNVISTTVTPAAIQDFIDCAKYRLPKLKSLVERCID 1143
Query: 346 VNRS---KEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE-- 397
V+ E TL VR G C ELDELR ++ LP LE V +EL ++P +
Sbjct: 1144 VDEIYLLTEHDSPTLTSYVRSGVCRELDELRSVHHGLPALLEHVLKIELERVPSFLRRDE 1203
Query: 398 -MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+ + Y+ Q+GYL+ + + LE++ G++ F E + FY L
Sbjct: 1204 WLAKLSVEYLPQVGYLLRSVG-IIPVSVLEEM-GWKHVFD----EGEESFYEFDAGLRLA 1257
Query: 457 NLLGDIYHKILDMERAITRDL----VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+ +GDI I D++ + +L + H LF D L + ++ ELD LS A VA N
Sbjct: 1258 SEIGDILFSICDLQGRLLNELRIEILKHATLFRD-LSRCIS---ELDVLLSFADVAINYN 1313
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPNDTRIDND-GRINIITGPNYSGKSIYIK 570
+RPIL + L I+ GRH+L E +D F+PND + +D R+ IITGPN SGK++ ++
Sbjct: 1314 MVRPILVDDETLKIEGGRHILYESFIDHQFVPNDIELPSDRDRVVIITGPNGSGKTVALQ 1373
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD-------------SKHMTAEQSSFMIDLHQVGMM 617
+ LI +L+HIGSFVPA+ ATVGLTD + +SSF L++V M
Sbjct: 1374 TIGLITYLAHIGSFVPANRATVGLTDRIFTGMVNFKDDAATKTKVSESSFTYALNRVSRM 1433
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNE---G 674
+ AT +SLCL+DEFG T ++ G LL YF + PPK L TH E+ + G
Sbjct: 1434 INNATDRSLCLIDEFGTQTRSDTGAALLAAIAEYFAETEAPPKCLFTTHFREICDPAIVG 1493
Query: 675 CLPKSERLKFYTMSVLRPENNSTDV------EDIVFLYRLVPGHALLSYGLHCALLAGVP 728
+P +F T +R N ++ E + + L PG A SY + L G+
Sbjct: 1494 PIP-----RFITHMRMRAIVNVSEAAADDEDESVALTFILEPGVADSSYAIETFKLIGME 1548
Query: 729 AEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAF--DVLKGDLRLFFQ 785
+ RA + + ++ W E+ + + + + LA D+ + + R F +
Sbjct: 1549 KDPEDRA----RRGEKVEPIDPWGDEDQDERQKVFDAIASRALAVADDLTEENARAFVE 1603
>gi|189030692|sp|A8MFD4.2|MUTS_ALKOO RecName: Full=DNA mismatch repair protein MutS
Length = 880
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 314/621 (50%), Gaps = 73/621 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD + L++ +T + G+ K+G S+ +++K T MG R++R W P+L+++
Sbjct: 274 LDISTRRNLELTETIR-------GKNKKG-SLLWILDKTQTAMGGRMIRKWIEEPLLNIQ 325
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
N+N RL A++ L L E+LK + D+ + K S T D A KS+
Sbjct: 326 NINRRLEAVATLKNDILLRCELKESLKQIYDLERLSGKIAFGS--ATPRDLVALKKSVAF 383
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + K+FE S L+E L N D +E + I E + + E I + D
Sbjct: 384 LPDIKKLFENENSGLLKELLN--NIDTLEDIQALI--ESSILDEPSISLKD--------- 430
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIGYLM 413
G +++EG+ DELDEL Y E +A LE + K + V Y GY +
Sbjct: 431 GGIIKEGYNDELDEL---YVAAREGKHWIAKLEQAEKDRTGIKSLKVG---YNKIFGYYI 484
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL-DNLLGDIYHKI-LDMER 471
I + L L + +R Y TP+ +EL D +LG I ++ E+
Sbjct: 485 EITKSNL------HLAPENYIRKQTLANCER--YITPELKELEDKILGAEEKSIAIEYEQ 536
Query: 472 AI-TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
I R+++ H + + + AELD S A A +NNY++P + +DI+ GR
Sbjct: 537 FIEIRNMLLHEI---ERIQRTARAVAELDVLYSFAEAASENNYVKPTVNSSETIDIKEGR 593
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E ++ FI NDT I+ D ++ +ITGPN +GKS Y++QVALI+ ++ IGSFVPA
Sbjct: 594 HPVVEKVLENNMFISNDTYINTEDEQLLMITGPNMAGKSTYMRQVALIILMAQIGSFVPA 653
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+AT+G+TD + ++ QS+FM+++ ++ ++ AT +SL ++DE G+GT T
Sbjct: 654 TSATIGITDRIFTRVGANDDLSQGQSTFMVEMSEMATIVNLATKKSLLIVDEIGRGTSTF 713
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSER-LKFYTMSVLRPENNSTD 698
DG+ + T Y + + + L TH EL L ++ R +K Y + V D
Sbjct: 714 DGLSIAWSTAEY-ICQSLGSRTLFSTHYHELTK---LSETYRGIKNYKVLV------KED 763
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-----EAAQNNKHVERWSH 753
ED++FL+++V G+A SYG+ A LAG+PA +I RA+++L E+ Q +++ +
Sbjct: 764 KEDVIFLHKVVKGNADRSYGIQVAKLAGLPAAIITRASHILSDLERESIQKEQYIIESTA 823
Query: 754 ENISAQDQQYKNAVEKMLAFD 774
EN N EK L D
Sbjct: 824 ENTLTASTDVAN--EKQLKLD 842
>gi|225572115|ref|ZP_03780979.1| hypothetical protein RUMHYD_00409 [Blautia hydrogenotrophica DSM
10507]
gi|225040449|gb|EEG50695.1| DNA mismatch repair protein MutS [Blautia hydrogenotrophica DSM
10507]
Length = 877
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 303/597 (50%), Gaps = 70/597 (11%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
S+ S +K++ LD++ L++ +T + G S+ G+++K T MG R+L
Sbjct: 256 SIRPYSADKYMLLDSSTRRNLELVETLREKKKRG--------SLLGVLDKTRTAMGARML 307
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA 282
R++ +P++D E + RL+AI + L L E L + D+ ++ + + S
Sbjct: 308 RSYVEQPLIDKEKIEERLDAIEELNQNALLREELREYLGPIYDLERLVGRISYKS--ANP 365
Query: 283 SDWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
D AF S+ L ++ ++ F + + E++ D +E+ + ++ A V E
Sbjct: 366 RDLVAFRSSLKMLPYLRELLREFHSPLLMQIHERM-----DAMEELENLVSK--AIVEEP 418
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + D G ++++G+ +E+D R+ E ++L ++ + E + + M
Sbjct: 419 PLAMKD---------GGIIKDGYNEEVDNYRRSKSEGKQWLTQLEARERERTG--IRSM- 466
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y GY + + D + ++ + S+ Y TP+ +EL+NL+
Sbjct: 467 --KIKYNRVFGYYLEVTNSFKDQVPEDYIRKQTLSNSER--------YVTPELKELENLI 516
Query: 460 GDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
K+ +E + RD V + KAV A LD SLALVA +NNY RP
Sbjct: 517 LGAEDKLYALEYELFCQVRDTVGREVVRIQKTAKAV---ATLDVLASLALVAERNNYTRP 573
Query: 517 ILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVA 573
+ + ++DI+NGRH + E + D FI NDT +DN+ RI++ITGPN +GKS Y++Q A
Sbjct: 574 KINTQGVIDIKNGRHPVVEQMIENDMFIANDTYLDNNKKRISVITGPNMAGKSTYMRQSA 633
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV ++ +GSFVPAD A +G+ D S + + QS+FM+++ +V +LR AT++S
Sbjct: 634 LIVLMAQLGSFVPADKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATAKS 693
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLK 683
L +LDE G+GT T DG+ + I + + K L TH EL EG K +
Sbjct: 694 LLILDEIGRGTSTFDGLSIAWAVIEHISNPKILGAKTLFATHYHELTELEG---KISGVN 750
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
Y ++V +DIVFL ++V G A SYG+ A LAGVP V+ RA ++E
Sbjct: 751 NYCVAV------KEKGDDIVFLRKIVKGGADRSYGIQVARLAGVPESVLDRAKELVE 801
>gi|221633094|ref|YP_002522319.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157200|gb|ACM06327.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 884
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 293/622 (47%), Gaps = 97/622 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+D ++ + F+ LDA L++ ++ R + S+ ++++ TPMG R
Sbjct: 273 LDDLVVYQTDSFMTLDAVTRRNLELLES---------ARGERAHSLVSVLDRTETPMGAR 323
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH----ILKKFNSP 276
LLR W +P+LD+ + R ++ + + A L L V D+ +L +P
Sbjct: 324 LLRRWLSQPLLDVGAIRQRQERVAALVEETLVRARLGILLAGVADLERLANRVLTGHVTP 383
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL---RLLNFDIVEKAASCITTEL 333
+ A L I + + E+ +L + L RL+ IVE +
Sbjct: 384 RELRQLGHSLARLPEIAEI--AGRRPELAPLSALPDLLPAARLIESAIVEDPPPSL---- 437
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G G ++R GF ELDELR+ E+ +ASLE +
Sbjct: 438 -------------------GQGHVIRAGFAPELDELRERARSAREW---IASLEQRERER 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKL-----DDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+ Y GY + + D + L G E Y
Sbjct: 476 TGIRSL--KVGYNKVFGYYIEVSHANRHLVPPDYQRKQTLVGAER-------------YV 520
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
TP+ RE ++++ +I +E + R +V + + + +A AELD + +LA VA
Sbjct: 521 TPELREFESMVLQAEERIAALEEEVYRRVVKELASCAAQIRRAAQLVAELDVYRALAEVA 580
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDG-RINIITGPNYSGK 565
Y+RP++ +L+I+ GRH + E T++ F+ ND R+D + +I I+TGPN +GK
Sbjct: 581 VDRRYVRPVVDESTVLEIRGGRHPVVETTLEAGRFVSNDARLDTESDQIVILTGPNMAGK 640
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMM 617
S +++QVALIV L+ +GSFVPA+ A +GL D + A QS+FM+++ + +
Sbjct: 641 STFLRQVALIVLLAQVGSFVPAEFARIGLVDRIFTRIGAQDDIAAGQSTFMVEMVETASI 700
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-----VTCDVPPKVLVCTHLTELLN 672
LRQAT +SL +LDE G+GT T DG+ + + Y + C + L TH EL
Sbjct: 701 LRQATLRSLVVLDEVGRGTSTYDGLAIARAVVEYLHNHPRLGC----RTLFATHYHELTE 756
Query: 673 -EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E LP R++ Y M VL + + +VFL+R+V G A SYG+H A LAG+P V
Sbjct: 757 LERVLP---RVRNYRMDVL------EEGDRVVFLHRVVRGGADKSYGIHVAQLAGLPHAV 807
Query: 732 IKRAAYV---LEAAQNNKHVER 750
++RA + LE+A++ +H R
Sbjct: 808 VRRAREILQELESARSGEHTRR 829
>gi|71399982|ref|XP_802917.1| mismatch repair protein MSH5 [Trypanosoma cruzi strain CL Brener]
gi|70865304|gb|EAN81471.1| mismatch repair protein MSH5, putative [Trypanosoma cruzi]
Length = 657
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 297/640 (46%), Gaps = 78/640 (12%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCV 214
+ + I V EV L ++ LQ+ +T+ HP + GIGRAKEG S+ ++++
Sbjct: 27 RSELPIADVAEVPPLGLLYIEQETLSGLQLLRTEPHPMDYQGIGRAKEGLSLLSVVDRTC 86
Query: 215 TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK 272
+ +GR LLR WFL P+ D L R + +SFF E +LM L L++++ I K
Sbjct: 87 SVLGRALLRQWFLLPVRDESELRRRYDVVSFFTMQENYDLMMQLRRALRHLRITNSIFTK 146
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
+ +T +D+ + L+++ L + + + R L + IV ASC T +
Sbjct: 147 IRAAK--HTTNDYESLLRAVRGFLRIASLL------TPRAHLLPMFLRIV---ASCQTNQ 195
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELV 389
L + L+ + +R +R GF +LDEL + L E L VA E
Sbjct: 196 LEEISRLIDEGVSFSRDPGAALSKTYVHIRPGFDAKLDELCAHFTRLDEVLANVAQQEAR 255
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
LP L V C V+ GY++ + L E + G+E F +G F+ T
Sbjct: 256 CLPSLWGLCSVVC-VFAPCWGYVITLPRFSL-PVGREDIPGWELLFQTEEGP----FFKT 309
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
P TR +D +GD+ IL E I R+L + + S L+ ++ AELDC + AL A
Sbjct: 310 PLTRRMDEEIGDLRSAILVREGEIQRELDKRLIVLSPALIP-LHLCAELDCLMGFALAAL 368
Query: 510 QNNYMRPILTLEP-LLDIQNGRH-VLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKS 566
+ + RP + EP +L I+ G H + +P I ++ R+ ++TG N SGKS
Sbjct: 369 EGQWSRPEIVKEPGVLVIERGFHPIFARTAAHQVVPYSINIRTSNQRVCLLTGANGSGKS 428
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS----------------KHMTAE-QSSFMI 609
I I VA VFL+HIG +VP AT+GL D+ T E SSF
Sbjct: 429 ILITAVAHAVFLAHIGCYVPCTHATIGLFDTLMSLHAVSYSSRDRTLASTTKELHSSFGN 488
Query: 610 DLHQVGMMLRQATS----------QSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVP 658
+L + ML++ ++ +SL +LDEFGKGTL+ DG LL +I F++ D
Sbjct: 489 ELVSMSRMLQRCSTRNKEGGAGSGRSLLVLDEFGKGTLSLDGAALLAVSIRSFISFGDRR 548
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP--ENNSTDVEDI----------VFLY 706
P VL+ TH E+L +P+ E + + L P ED+ V+ Y
Sbjct: 549 PIVLLATHYVEVLQPQLIPREEIMVLEMQTTLVPTARTGGEGGEDVYEEFIGGSQLVYSY 608
Query: 707 RLVPGHAL-----------LSYGLHCALLAGVPAEVIKRA 735
R+ P AL S+ L AL VP +++RA
Sbjct: 609 RVAPVQALSSMDTIQQKGMTSHALRFALQFSVPPLLLQRA 648
>gi|158320586|ref|YP_001513093.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
gi|158140785|gb|ABW19097.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
Length = 874
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 314/621 (50%), Gaps = 73/621 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD + L++ +T + G+ K+G S+ +++K T MG R++R W P+L+++
Sbjct: 268 LDISTRRNLELTETIR-------GKNKKG-SLLWILDKTQTAMGGRMIRKWIEEPLLNIQ 319
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
N+N RL A++ L L E+LK + D+ + K S T D A KS+
Sbjct: 320 NINRRLEAVATLKNDILLRCELKESLKQIYDLERLSGKIAFGS--ATPRDLVALKKSVAF 377
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + K+FE S L+E L N D +E + I E + + E I + D
Sbjct: 378 LPDIKKLFENENSGLLKELLN--NIDTLEDIQALI--ESSILDEPSISLKD--------- 424
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIGYLM 413
G +++EG+ DELDEL Y E +A LE + K + V Y GY +
Sbjct: 425 GGIIKEGYNDELDEL---YVAAREGKHWIAKLEQAEKDRTGIKSLKVG---YNKIFGYYI 478
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL-DNLLGDIYHKI-LDMER 471
I + L L + +R Y TP+ +EL D +LG I ++ E+
Sbjct: 479 EITKSNL------HLAPENYIRKQTLANCER--YITPELKELEDKILGAEEKSIAIEYEQ 530
Query: 472 AI-TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
I R+++ H + + + AELD S A A +NNY++P + +DI+ GR
Sbjct: 531 FIEIRNMLLHEI---ERIQRTARAVAELDVLYSFAEAASENNYVKPTVNSSETIDIKEGR 587
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E ++ FI NDT I+ D ++ +ITGPN +GKS Y++QVALI+ ++ IGSFVPA
Sbjct: 588 HPVVEKVLENNMFISNDTYINTEDEQLLMITGPNMAGKSTYMRQVALIILMAQIGSFVPA 647
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+AT+G+TD + ++ QS+FM+++ ++ ++ AT +SL ++DE G+GT T
Sbjct: 648 TSATIGITDRIFTRVGANDDLSQGQSTFMVEMSEMATIVNLATKKSLLIVDEIGRGTSTF 707
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSER-LKFYTMSVLRPENNSTD 698
DG+ + T Y + + + L TH EL L ++ R +K Y + V D
Sbjct: 708 DGLSIAWSTAEY-ICQSLGSRTLFSTHYHELTK---LSETYRGIKNYKVLV------KED 757
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-----EAAQNNKHVERWSH 753
ED++FL+++V G+A SYG+ A LAG+PA +I RA+++L E+ Q +++ +
Sbjct: 758 KEDVIFLHKVVKGNADRSYGIQVAKLAGLPAAIITRASHILSDLERESIQKEQYIIESTA 817
Query: 754 ENISAQDQQYKNAVEKMLAFD 774
EN N EK L D
Sbjct: 818 ENTLTASTDVAN--EKQLKLD 836
>gi|346975059|gb|EGY18511.1| DNA mismatch repair protein mutS [Verticillium dahliae VdLs.17]
Length = 863
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 227/450 (50%), Gaps = 72/450 (16%)
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI-- 415
VR G DELD L++ Y + + L +V S +LP + + CI + Q+G+L +
Sbjct: 361 VRWGVNDELDRLKRDYNGMEDLLSQVVSDLSNELPEWARNIVTSCIFWP-QLGFLTMVPL 419
Query: 416 ---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL----- 467
EE + D ++ FS ++ +Y + RELD LGD+Y IL
Sbjct: 420 CPDSEEPMYDGQGLDCDNWQIMFS----AERKAYYKNRRMRELDAHLGDMYGGILGRPSD 475
Query: 468 -----------DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
D+E I +L + + D LL A + ELD +++AL A + + P
Sbjct: 476 LKLCFHTDYSKDLEVEILHNLAVDVMVHEDALLAAADICGELDALVAMALAAGKYGWTAP 535
Query: 517 ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND------------------------- 551
+T+ +L I+ GRH LQE+ + +IPND +
Sbjct: 536 KVTMSNVLSIRAGRHPLQELVLPLYIPNDCYLSGGEDHETPGLGFESRSSGHLPMNTSEC 595
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAE 603
+ ++TGPN+SGKS+Y+K VALI +L+HIGS+VPA+ A VGLTD + ++
Sbjct: 596 ASMTVLTGPNHSGKSVYLKHVALITYLAHIGSYVPAEEAIVGLTDKILTRLSTRETVSRN 655
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVL 662
+SSF +DL QV L+ A+ +SL L+DEFGKGT ++DG GL+ +N+FV+ P+VL
Sbjct: 656 ESSFAVDLKQVAFCLKSASPRSLVLVDEFGKGTASDDGAGLMAALVNHFVSLRTKTPRVL 715
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMS------VLRPENNSTDVEDIVFLYRLVPGHALLS 716
TH E+ + +S L M V RP+N +V+LYRL+PG + S
Sbjct: 716 AATHFHEIFEGRHVSESPYLTLAHMDIRLDSRVSRPDNQ------LVYLYRLIPGVSTES 769
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+G CA L+GV + V+ RA + +N+
Sbjct: 770 FGAICAALSGVDSSVVDRAKTIAHILSSNE 799
>gi|397904383|ref|ZP_10505299.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
gi|397162603|emb|CCJ32633.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
Length = 858
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 321/639 (50%), Gaps = 69/639 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++ F+ LD+ + L++ +T + R+K+G ++ +++K +T MG R
Sbjct: 244 ITSIKKYNISDFMILDSFTRKNLELTETLRT-------RSKKG-TLIDVLDKTLTAMGGR 295
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W P+++++ +N RL A+ F+ + + + L E L+ + DI IL K + S
Sbjct: 296 LLRKWIEEPLMNIKEINKRLEAVEEFIDNIYISSDLREFLRNIYDIERILSKISCES--A 353
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D A +SI L + + S+ +RE +FD ++ +Y L+
Sbjct: 354 NARDLNALKQSISMLPDIKAALKECRSDLIREIEN--DFDTLDD-----------IYNLI 400
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I N G +++ G+ E+D+LR ++ E+ E + K + V
Sbjct: 401 NAAIIENPPVSVKEGGIIKSGYNQEVDKLRDAMLNGKNWIAELEQREKEETG--IKSLKV 458
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD-NLL 459
Y GY + I + L + + +R TP+ +E++ N+L
Sbjct: 459 G---YNKVFGYYIEITK-----ANLSLIPKDRYIRKQTLANAERFI--TPELKEIEENIL 508
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
G KI+++E + D+ + + + + K + A +D LS A V+ +NNY++P +T
Sbjct: 509 G-AESKIVELEYELFVDVRNKVYSQVERIKKIAQYLAIIDVLLSFARVSFENNYVKPEIT 567
Query: 520 LEPLLDIQNGRH-VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ +++I +GRH V++++ F+PNDT +DN + I IITGPN +GKS Y++QVALI
Sbjct: 568 NDGIIEIIDGRHPVVEKVISSPFVPNDTILDNKENMIIIITGPNMAGKSTYLRQVALITL 627
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
LS +G FVPA A + + D S ++ QS+FM+++ +V +L+ AT SL +L
Sbjct: 628 LSQVGCFVPAKKAKISIVDRIFTRIGASDDLSLGQSTFMVEMTEVSNILKNATKNSLIIL 687
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ + I Y + + K L TH EL EG K + +K Y +S
Sbjct: 688 DEVGRGTSTYDGLSIAWSVIEY-INKSIGAKTLFATHYHELTELEG---KIKGVKNYCIS 743
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN--- 745
V +DI+FL ++V G A SYG+ A LAG+P EVIK+A +L + N
Sbjct: 744 V------KEHGDDIIFLRKIVRGGADQSYGIQVAKLAGLPDEVIKKAKEILAKLEENDIN 797
Query: 746 --------KHVERWSHENISAQDQQYKNAVEKMLAFDVL 776
K V S I+ + Q +E++ D+L
Sbjct: 798 KIKKDEVIKEVATTSSFEINLFNYQENEIIEELKNIDIL 836
>gi|365981537|ref|XP_003667602.1| hypothetical protein NDAI_0A02010 [Naumovozyma dairenensis CBS 421]
gi|343766368|emb|CCD22359.1| hypothetical protein NDAI_0A02010 [Naumovozyma dairenensis CBS 421]
Length = 875
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 290/608 (47%), Gaps = 65/608 (10%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD + ALQIF + K H + + FS+ +++ + + +LL++W P+
Sbjct: 214 LDDDSIAALQIFPSIKKTGHDKMQKGA-CFSILELLDHTSSSLATKLLKSWLASPLSSKV 272
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKF-NSPSFIYTASDWTAFLKS 291
+ RL + L + L E LK + D+ IL N + + T +FL+
Sbjct: 273 LIEGRLKVVEILLEKNNNIVYEDLREQLKGLPDLFRILNAIRNGKTTLSTWLSLLSFLRK 332
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCIT-TELAYVYELVIGIIDVNRSK 350
+ ++ K+ + + +I E+ + I E+ + + ID+ SK
Sbjct: 333 AIDIFYLVKLLKYDKD----------SMNIFEQISQRIDPAEMELLLRKIETTIDIRTSK 382
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM--------FVPC 402
E T+ +G + LDE R +Y EL L +VA L L +E
Sbjct: 383 ETKTVTIF-DGVNEALDECRHVYNELEIILTDVAKCAEQSLLQLLRERSNIATLLGTTVN 441
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGF--EFAFSDMDGETKRLFYHTPKTRELDNLLG 460
VYI Q+GYL+ + ++LE++ + +M T +++ ++D G
Sbjct: 442 AVYIPQLGYLVTL------SSSLEEVTSIAASLKWEEMFRTTTNIYFKNEDVIQMDEKYG 495
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
DIY I+D+E I + ++ L + N A+L+ +S A V+ NY RP L
Sbjct: 496 DIYGAIIDLEVEILQGSQENVLAIQSSLTEYCNLLAQLEVLMSFAYVSQLQNYCRPQLYE 555
Query: 521 E-PLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGKSI 567
+ +LD++NGRH L E V+T+I ND +D N RI ++TG N SGK++
Sbjct: 556 DNSILDVRNGRHPLYETLVETYIGNDIYLDGGNFDDENWFQTNKKRIVVLTGANASGKTV 615
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLR 619
++ Q LIV+L+HIG FVPAD+A +GL D ++ ++S+F D Q+ L
Sbjct: 616 FLTQNGLIVYLAHIGCFVPADSAKIGLIDKILTRIRTRDTISRQESTFQRDSFQMAKCLS 675
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
AT +SL L+DEFGKGT DG L G I + P+ L CTH E+ + LP +
Sbjct: 676 LATERSLILVDEFGKGTDVIDGPSLFAGIIAFLSKLRRCPRFLSCTHFHEIFRDTILPTT 735
Query: 680 -ERLKFYTMSVLR----PEN-----NSTDVED--IVFLYRLVPGHALLSYGLHCALLAGV 727
+K Y V+ P++ + D+ED I+FLYR+ G A S+G++CA + G+
Sbjct: 736 MPGVKHYATEVMLDGKVPDDSLHLASEKDLEDAGIMFLYRIKEGIAKQSFGVYCAKVCGI 795
Query: 728 PAEVIKRA 735
E+++RA
Sbjct: 796 KTEIVRRA 803
>gi|423082694|ref|ZP_17071283.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
gi|423087012|ref|ZP_17075402.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357545261|gb|EHJ27236.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357547812|gb|EHJ29687.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
Length = 947
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 303/590 (51%), Gaps = 57/590 (9%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ LD L++ QT + G K+G S+ +++K T MG RLLR + P+
Sbjct: 263 EYMVLDMFTRTNLELTQTIR-------GNKKKG-SLLHVLDKTSTAMGGRLLRKYVEEPL 314
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ + +RL+ I L L++ LK + DI I K AF +
Sbjct: 315 INKSKIENRLDVIEEIKDDFILREDLNDILKNIYDIERICGKI-------------AFER 361
Query: 291 -SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+ L+H+ E +L++ + L N I++K S + +L +Y L+ I +
Sbjct: 362 VTPKELIHLKNSIEK--LPNLKDTINLSNAKILKKYVSEMD-KLDDIYNLIDEAILEEPT 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G +++ F DEL ELR+I + ++E+ + E + K + I +
Sbjct: 419 ITIKDGNIIKSDFSDELKELREISKNGAFLVKEIENREREKTG--VKSL---KIGFNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L++ + S+ + Y TP+ +E++ + KI +
Sbjct: 474 GYYIEITKANFKQAKLDETYIRKQTLSNAER------YITPELKEIEEKILHAEEKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I ++ I D + K A +D F+SLA VAH NNY++P + LDI+NG
Sbjct: 528 EYEIFVEIRDTIYKNIDRIQKVAKIIANIDVFVSLATVAHINNYVKPAINENNKLDIRNG 587
Query: 530 RHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E V + F+PNDT ++ + INIITGPN SGKS Y++Q A+I ++HIGSFVP
Sbjct: 588 RHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVP 647
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A++A + + D S ++ QS+FM+++++V ++L+ AT +SL +LDE G+GT T
Sbjct: 648 AESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTST 707
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGI L + Y + ++ K L TH EL + + + +K Y+++V D
Sbjct: 708 YDGISLAWSIVEY-IQKNIRCKTLFATHYHELTD--LEEEFKEVKNYSIAV------KED 758
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
E I+FL +++P A SYG++ A LA +P EVI+RA Y+L+ + N HV
Sbjct: 759 GEGIIFLRKIIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLEKN-HV 807
>gi|407410651|gb|EKF33009.1| mismatch repair protein MSH5, putative [Trypanosoma cruzi
marinkellei]
Length = 784
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 194/642 (30%), Positives = 297/642 (46%), Gaps = 82/642 (12%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCV 214
+ + I + EV L ++ LQ+ +T+ HP + GIGRAKEG S+ ++++
Sbjct: 154 KSELPIADIAEVPPLGLLYIEQETLYGLQLLRTEPHPMDYQGIGRAKEGLSLLSVVDRTC 213
Query: 215 TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK 272
+ +GR LLR WFL P+ D L R + +SFF E +LM L L++++ I K
Sbjct: 214 SVLGRALLRQWFLLPVRDESELRRRYDVVSFFTMQENYDLMMQLRRALRHLRITNSIFTK 273
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
+ +T +D+ + L+++ L + + S R + IV ASC T +
Sbjct: 274 IRAAK--HTTNDYESLLRTVRGFLRIASLL------SPRAHFLPMFLRIV---ASCQTNQ 322
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELV 389
L + L+ + +R +R GF +LDEL + L E L VA E
Sbjct: 323 LEEISRLIDEGVSFSRDPGSALSKTYVHIRPGFDAKLDELCAHFTRLDEVLANVAQQEAG 382
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCI--FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
LP L V C V+ GY++ + F + E + G+E F +G F+
Sbjct: 383 SLPSLWGLCSVVC-VFAPCWGYVITLPRFSSPVGR---EDIPGWELLFQTEEGP----FF 434
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
TP TR +D +GD+ IL E + R+L + + S L+ ++ AELDC + AL
Sbjct: 435 KTPLTRRMDEEIGDLRSAILVREGEVQRELDKRLIVLSPALIP-LHLCAELDCLMGFALC 493
Query: 508 AHQNNYMRPILTLEP-LLDIQNGRH-VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSG 564
A + + RP + EP +L I+ G H + V +P I N + R+ ++TG N SG
Sbjct: 494 ALEGQWSRPEIVQEPGVLVIERGFHPIFARTAVHQVVPYSINIRNSNQRVCLVTGANGSG 553
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTDS----------------KHMTAE-QSSF 607
KSI I +A VFL+HIG +VP AT+GL D+ T E SSF
Sbjct: 554 KSILITAIAHAVFLAHIGCYVPCAHATIGLFDTLMSLHAVSYSSRDRSLASTTKELHSSF 613
Query: 608 MIDLHQVGMMLRQATS----------QSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CD 656
+L + ML++ ++ +SL +LDEFGKGTL+ DG LL G+I F++ D
Sbjct: 614 GNELVSMSRMLQRCSARNKEGGAGSGRSLMVLDEFGKGTLSLDGAALLAGSIRSFISFGD 673
Query: 657 VPPKVLVCTHLTELLNEGCLPKSE--RLKFYTMSVLRPENNSTDVEDI----------VF 704
P VL+ TH E+L +P+ E L+ T V ED+ V
Sbjct: 674 RRPIVLLATHYVEVLQPQFIPREEIMVLEMQTTLVSTARTGGEGGEDVCEEFIGGSQLVH 733
Query: 705 LYRLVP-----------GHALLSYGLHCALLAGVPAEVIKRA 735
YR+ P + S+ L AL VP +++RA
Sbjct: 734 SYRVAPVQDLSSIDTIQQKGMTSHALRFALQFSVPPLLLQRA 775
>gi|399890152|ref|ZP_10776029.1| DNA mismatch repair protein MutS [Clostridium arbusti SL206]
Length = 878
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 307/603 (50%), Gaps = 59/603 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID++ S+ ++ +D + L++ +T + S G S+ +++K T MG R
Sbjct: 248 IDNLNHYSVVDYMSIDVNSRRNLELTETLREKSKKG--------SLLWVLDKTSTAMGGR 299
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LR W +P++D ++ RL+++ F + + L LK + DI ++ K ++ S
Sbjct: 300 QLRRWIEQPLIDKISIEERLDSVQEFTENISVHEDLKNALKQIYDIERLVGKISTLSV-- 357
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A + SI L V +E L+ D+++K + + +L +Y ++
Sbjct: 358 NAKELIFLKNSIEKLPKV------------KEVLKNCKSDLLKKVYTNLD-DLKDIYNIL 404
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + S G ++++G+ + +DELRQ E++ ++ S E + K + V
Sbjct: 405 DTAISDSPSVSVKEGNIIKDGYNNNVDELRQAKSHGKEWIAKLESSEREETS--IKSLKV 462
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + I + + L + ++ +R Y T + +E++ +
Sbjct: 463 G---YNKVFGYYIEITK-----SNLNMVPEGKYIRKQTLANCER--YITEELKEMEEKIL 512
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K++++E + + I D + K+ +ELDC S A VA ++NY +P +
Sbjct: 513 GAEEKLINIEYELFASIRDEISKHIDRMKKSAKLLSELDCLCSFASVALEHNYCKPNVVD 572
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+DI GRH + E ++V TF+ NDT+I+ D ++ +ITGPN +GKS Y++QVALIV
Sbjct: 573 SGDIDIHEGRHPVVENMISVGTFVANDTKINTTDEQLMLITGPNMAGKSTYMRQVALIVI 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL +L
Sbjct: 633 MAQIGSFVPAQDAIISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLIIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + Y T D+ K L TH EL + EG + LK Y++
Sbjct: 693 DEVGRGTSTYDGLSIAWSVVEYICTNKDIKCKTLFATHYHELTSLEGVI---NGLKNYSI 749
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE--AAQNN 745
+V + E +DIVFL ++VPG A SYG+ A LAG+P +V RA +LE +NN
Sbjct: 750 AVKQIE------DDIVFLRKIVPGGADQSYGIEVAKLAGLPEKVTSRAKEILEDLEKENN 803
Query: 746 KHV 748
+
Sbjct: 804 NEI 806
>gi|407850073|gb|EKG04605.1| mismatch repair protein MSH5, putative [Trypanosoma cruzi]
Length = 784
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 295/640 (46%), Gaps = 78/640 (12%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCV 214
+ + I V EV L ++ LQ+ +T+ HP + GIGRAKEG S+ ++++
Sbjct: 154 RSELPIADVAEVPPLGLLYIEQETLSGLQLLRTEPHPMDYQGIGRAKEGLSLLSVVDRTC 213
Query: 215 TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK 272
+ +GR LLR WFL P+ D L R + +SFF E +LM L L++++ I K
Sbjct: 214 SVLGRALLRQWFLLPVRDESELRRRYDVVSFFTMQENYDLMMQLRRALRHLRITNSIFTK 273
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
+ +T +D+ + L+++ L + + + R L + IV ASC T +
Sbjct: 274 IRAAK--HTTNDYESLLRTVRGFLRIASLL------TPRAHLSPMFLRIV---ASCQTNQ 322
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELV 389
L + L+ + +R +R GF +LDEL + L E L VA E
Sbjct: 323 LEEISRLIDEGVSFSRDPGAALSKTYVHIRPGFDAKLDELCAHFTRLDEVLANVAQQEAR 382
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
LP L V C V+ GY++ + L E + G+E F +G F+ T
Sbjct: 383 CLPSLWGLCSVVC-VFAPCWGYVITLPRFSL-PVGREDIPGWELLFQTEEGP----FFKT 436
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
P TR +D +GD+ IL ME I R+L + + S L+ ++ AELDC + AL A
Sbjct: 437 PLTRRMDEEIGDLRSAILVMEGEIQRELDKRLIVLSPALIP-LHLCAELDCLMGFALAAL 495
Query: 510 QNNYMRPILTLEP-LLDIQNGRH-VLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKS 566
+ + RP + EP +L I+ G H + +P I ++ R+ ++TG N SGKS
Sbjct: 496 EGQWSRPEIVKEPAVLVIERGFHPIFARTAAHQVVPYSINIRTSNQRVCLVTGANGSGKS 555
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS----------------KHMTAE-QSSFMI 609
I I VA VFL+HIG +VP AT+GL D+ T E SSF
Sbjct: 556 ILITAVAHAVFLAHIGCYVPCAHATIGLFDTLMSLHAVSYSSRDRTLASTTKELHSSFGN 615
Query: 610 DLHQVGMMLRQATS----------QSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVP 658
+L + ML++ ++ +SL +LDEFGKGTL+ DG LL +I + D
Sbjct: 616 ELVSMSRMLQRCSTRNKEGGAGSGRSLLVLDEFGKGTLSLDGAALLAVSIRSLTSFGDRR 675
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP--ENNSTDVEDI----------VFLY 706
P VL+ TH E+L +P+ E + + L P ED+ V Y
Sbjct: 676 PIVLLATHYVEVLQPQLIPREEIMVLEMQTTLVPTARTGGEGGEDVCEEFIGGSQLVHSY 735
Query: 707 RLVPGHAL-----------LSYGLHCALLAGVPAEVIKRA 735
R+ P AL S+ L AL VP +++RA
Sbjct: 736 RVAPVQALSSMDNIQQKGMTSHALRFALQFSVPPLLLQRA 775
>gi|302389749|ref|YP_003825570.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
gi|302200377|gb|ADL07947.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
Length = 863
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 302/603 (50%), Gaps = 71/603 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+S+ +++ LD T L++ Q+ + K+ S+ +++K VT MG R
Sbjct: 252 INSIRYYERTEYMALDVTCRRNLELTQS--------LMDGKKQGSLLWVLDKTVTSMGGR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LR W +P++D+ + R +A+ + L L E LK + D+ + K +
Sbjct: 304 TLRKWIEQPLIDIIKIKERQDAVEELYQNYFLRQELREQLKNLYDLERLTGKLVCGNL-- 361
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISE---SLREQLRLLNFDIVEKAASCITTELAYVY 337
A D A ++ + ++ S+ +L +L LLN VY
Sbjct: 362 NARDLLAIKNTVKHFPKIKELLAGCRSKLLITLYNELDLLN----------------DVY 405
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
EL+ I+ + G ++++GF E+D LR+ E ++ E+ E + K
Sbjct: 406 ELLEKAINDDPPISVKEGGIIKDGFDSEVDRLRKASTEGKSWIAELERKERERTG--IKS 463
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ V Y GY + I + L + ++ A +GE + T + +E ++
Sbjct: 464 LKVG---YNKVFGYYIEITKANLSLVPKDYIRKQTLA----NGER----FITEELKEYES 512
Query: 458 LLGDIYHKILDMER----AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
L+ K+LD+E I DL++ I L K+ + LD +SLA VA NNY
Sbjct: 513 LIMGAEEKLLDLEYQIFCKIREDLITKIT----RLKKSAQVVSVLDALVSLAEVASSNNY 568
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIK 570
++P LTL ++I GRH + E+T+ + FIPNDT I+ +D I+IITGPN +GKS Y++
Sbjct: 569 VKPELTLNDEINIVEGRHPVVELTLKDEMFIPNDTHINCSDSMISIITGPNMAGKSTYMR 628
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
QVALIV ++ IGSFVPA +A +G+ D S ++ + QS+FM+++ +V +L+ AT
Sbjct: 629 QVALIVLMAQIGSFVPAKSAQIGIVDRIFTRIGASDNLASGQSTFMVEMTEVANILKHAT 688
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
+SL +LDE G+GT T DG+ + I Y + ++ K L TH E+ L K + +
Sbjct: 689 PKSLLILDEIGRGTSTYDGLSIAWAVIEY-IHKNIKAKTLFATHYHEITQ---LKKLKGV 744
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K + + V EDI+FL ++VPG A SYG+ A LAG+P VI RA +L+
Sbjct: 745 KNFKVMV------KERGEDIIFLRKIVPGEADRSYGIEVAKLAGLPKSVILRAQEILKDL 798
Query: 743 QNN 745
+ N
Sbjct: 799 EQN 801
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 299/594 (50%), Gaps = 69/594 (11%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L++FL +D L+I + + S G S+ +++K +TPMG RLL+ W L
Sbjct: 261 LSQFLIIDEATKRNLEILRNNLDGSLKG--------SLLWVLDKTLTPMGGRLLKEWLLY 312
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+ +LE++ +RL A+++ + +L E L + D+ + + + + D A
Sbjct: 313 PLRNLESIEARLEAVAYLVDEPSKRKNLRELLARIADVERLTGR--AAMGVANPRDLLAL 370
Query: 289 LKSICSLLHVNKIFEVGIS---ESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
S+ + + ++ IS ++++E L L+ D+V+ I E ++
Sbjct: 371 KDSLKMVPQLKELLPEKISPLLDAIKENL-LVPGDLVQNLEKTIREEAPVNFK------- 422
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCI 403
G ++++G +ELDELR++ ++ FL E+ + E + +P+L +
Sbjct: 423 --------EGGVIKDGVHEELDELRRLKDDALSFLAELETRERARTGIPNLK-------V 467
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + + L ++ + GE + TP+ +E + +
Sbjct: 468 GYNRVFGYYIEVSKSHLSKVPDNYIRKQTL----VGGER----FITPELKEFEAKVLSAD 519
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
+I ++E+ + ++ ++ + L K A LD SLA VA NNY+RP + EP
Sbjct: 520 ERIKELEQELFLEIRKNVAEKAQELKKLARALATLDVLASLAEVAVTNNYIRPKIIEEPG 579
Query: 524 LDIQNGRH--VLQEMTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+ I+ GRH V + + +F+PN ++D + + +ITGPN +GKS ++Q ALI L+H
Sbjct: 580 IQIREGRHPVVEKALPSGSFVPNSVKLDLKENVVLVITGPNMAGKSTILRQTALITLLAH 639
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
+GSFVPA+ AT+GL D S ++ +S+FM+++ + +L QATS+SL +LDE
Sbjct: 640 VGSFVPAEEATIGLCDRIFSRIGASDQLSRGRSTFMVEMSECANILHQATSRSLVILDEI 699
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
G+GT T DG+ + + + L TH EL+ G P +K + ++V
Sbjct: 700 GRGTSTYDGLAIAWAVAEFLHEKKI--MTLFATHYHELVELAGEYPG---IKNFNVAV-- 752
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T + I+FLYRL+PG A SYG+ A LAG+P EVI RA +L++ +N
Sbjct: 753 ----KTFEDQIIFLYRLLPGPASESYGVQVAALAGLPKEVIARAKDILKSLENK 802
>gi|119184295|ref|XP_001243072.1| hypothetical protein CIMG_06968 [Coccidioides immitis RS]
Length = 852
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 212/827 (25%), Positives = 375/827 (45%), Gaps = 139/827 (16%)
Query: 14 VGVSYYDSSIRQLHVLE-------------VWEDSNSDFPLIDIVK--YQAQPQIIYT-S 57
VG SYY + ++L+++E W S S PL + Y + + I
Sbjct: 97 VGCSYYVAEQKKLYIVEDIVSGGMDVVETCSW-GSFSRIPLDSQFRLPYHLEVRPIQEFG 155
Query: 58 TKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE-RIC 116
+S ++ L++LK G+ + P LV + FS+E A D G + ++ +
Sbjct: 156 FESAKTKLTSLKLRQGSADIPKF-LVPGNAFSHENAED--------AEDVGFTSQQGELL 206
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
YL ++DM + V V +G L+A L+ +R + +G+ + ID + SL + ++
Sbjct: 207 YLAGIVDMENHVSVGCAGALIAYLQRKRSTQDFQGDSAGDQLLRIDKIEMSSLKSNMFIN 266
Query: 177 ATAHEALQIFQTDKHPSHMGIGRAK------EGFSVFGMMNK-CVTPMGRRLLRNWFLRP 229
+LQI Q++ HP+ G + E S++G+ ++ T G+ +LR FLRP
Sbjct: 267 RDTLSSLQIIQSESHPNAFNQGPGQTSSSSKESLSIYGLFHRFARTSQGKTMLRQIFLRP 326
Query: 230 ILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+ ++ R + IS FL E + +A L ++LK + ++ ++
Sbjct: 327 TIHQSIISERHDFISTFLRVENADAVAKLTKSLKGINNLRPVM----------------- 369
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+H+ K G + R ++ I+E +L V ++ +D+
Sbjct: 370 --------IHLQKGISTG-NARFRGFKSVVWATILEAMHKLELAKLHQVGRVIYETVDLE 420
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH-LCKEMFVPCIVYI 406
S ++ + T+VR G ELD+++++Y + L +VA+ LP L E+ V +Y
Sbjct: 421 SSVQE-HRTIVRPGVDQELDKMKEMYNGMESLLSDVAATIAATLPEELSNELNV---IYF 476
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
Q+G+ + I LD+ G + ++ + R ++ + E+D LGD+Y I
Sbjct: 477 PQLGFNIAI---PLDEHGRPMYDGGDEEWAQVFTTENRAYFKDFRMHEMDERLGDMYGNI 533
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
E I DL I + + L++A + E+D
Sbjct: 534 CAKEIEIVYDLAQSILGYEEILVEASDVCGEID--------------------------- 566
Query: 527 QNGRHVLQEMTVDTFIPNDT------------------RIDNDGRIN--------IITGP 560
RH+L E V +++ NDT + D + + ++TGP
Sbjct: 567 ---RHILHEAAVSSYVANDTFLVGGKGTERYQSPTDDPKYSGDSQASDCTGPSMLLLTGP 623
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLH 612
NYSGKS+Y+KQVALI++++HIGSFVPA AT+G+TD + ++ QS+F IDL
Sbjct: 624 NYSGKSVYLKQVALIIYMAHIGSFVPAKTATIGVTDKILTRITSRETVSKTQSTFAIDLQ 683
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELL 671
Q+ + +T++SL ++DEFGKGT + DG+GL YF+ D PKV+ TH E+L
Sbjct: 684 QISFAVANSTNRSLIIIDEFGKGTESADGVGLACALFEYFLDLGDERPKVIGATHFHEIL 743
Query: 672 NEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
LP+ L+ M V S + I F + G + S+G CA + G+ +
Sbjct: 744 ENEFLPQRPELQLGHMEVQVDPAASELQDQITFRF----GRSSESFGTICAAMNGIDLAI 799
Query: 732 IKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG 778
+ RA + + ++ + + + +A+ + + AV F+ ++G
Sbjct: 800 VSRANEIGDLSRREEDLVAACAKMTNAEINELEVAVSVDQGFEYIQG 846
>gi|395737019|ref|XP_003776849.1| PREDICTED: mutS protein homolog 5 isoform 2 [Pongo abelii]
Length = 508
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 261/504 (51%), Gaps = 41/504 (8%)
Query: 309 SLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
LR+ R L + + A + +L ++ L+ ++D S + T V E+
Sbjct: 19 GLRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPEI 77
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDT 423
DE ++ LP FL EVA EL L + +P ++YI IG+L+ I + +
Sbjct: 78 DEKKRRLMGLPNFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMVEA 132
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
+ ++ G +F F ++L Y + +T+ELD LLGD++ +I D E + L +
Sbjct: 133 SDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLA 188
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFI 542
+ L + ++ A+ LD L+LA A Y RP + L + IQNGRH L E+ TF+
Sbjct: 189 RAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPRVLGVRIQNGRHPLMELCARTFV 248
Query: 543 PNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS---- 597
PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+
Sbjct: 249 PNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTR 308
Query: 598 ----KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
+ ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+ LL + Y++
Sbjct: 309 IHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRYWL 368
Query: 654 ----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
TC P + V T+ L+ LP+ +++ TM D D+VF Y++
Sbjct: 369 ARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGNDLVFFYQVC 419
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEK 769
G A S+ H A AG+P E++ R V + ++ K ++ Q + + V+K
Sbjct: 420 EGVAKASHASHTAAQAGLPDELVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDK 479
Query: 770 MLAFDVLKG--DLRLFF-QDLLPS 790
+ D+ DL +F Q++LP+
Sbjct: 480 FMKLDLEDPNLDLNVFMSQEVLPA 503
>gi|402223058|gb|EJU03123.1| hypothetical protein DACRYDRAFT_50578, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 867
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 236/847 (27%), Positives = 379/847 (44%), Gaps = 159/847 (18%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
QV +A H++G + YD + L +LE EDS S F L + Q P + TS+KS+
Sbjct: 1 QVCIAVNASSHKLGAAVYDPATGVLSLLEDTEDSAS-FDLAISLFEQTAPHTVITSSKSD 59
Query: 62 ESFLSALK---RSDGTTE--------APTV---KLVKSSIFS------------------ 89
E F + ++ +S+ T AP +L+ SIF+
Sbjct: 60 EKFQTIVEEHCKSNHITYNLRISREFAPARGAERLLSLSIFADSSTEYAPSTTTSSTSGL 119
Query: 90 -----------------YEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRA 132
+W + L G DG + +C ++ + V++RA
Sbjct: 120 KDAYDFMRSRVGKGRDPERNSWEGKLRLGNWGKSDGTAY---LCMGSAAALLDHLVRLRA 176
Query: 133 SGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP 192
+ G LENE G ++ I + ++ +++ ++A A +LQ+F + +H
Sbjct: 177 TEG---DLENE-----------GVTALDITDIRSFTMERYMHINADALSSLQVFSSQQHA 222
Query: 193 SHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSE 250
+ R+KE S++G++ TP+ LLR LRP+ + + + R +AIS FL +E
Sbjct: 223 NSYS-DRSKESLSLYGLLLAAHTPLTAPLLRRVLLRPLTEPDVIRGRHDAISLFLHPSAE 281
Query: 251 ELMASLHETLKYVKDIPHILK--KFNSPSFIYTASDWTAFLK----------SICSLLHV 298
++S LK + +K +W A +K S+ L+ +
Sbjct: 282 STVSSFPTRLKGLGGAGRAMKLLGLRGGRAEGGPKEWGALVKFAYEGAMLRESVLDLVSI 341
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
+V I L L + F E+A L+ ID + S E +V
Sbjct: 342 PGAKDVEIVRKLLGSLEVAAF-----------REMA---TLINETIDWDAS-ELECRVVV 386
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCI- 415
R + LD +R IY L + +A LE+ + P E+ V Y Q+GYL+ I
Sbjct: 387 RPRVDEALDNVRHIYHGLDSLMSRIA-LEISRHVPPQFASELNV---CYYPQLGYLITIP 442
Query: 416 -FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+E + + + G+ F+ +++++ + + +++D +GD+Y ++D E I
Sbjct: 443 LRDEWQGEADFQAMPGWAVQFT----TEEKVYFKSQEMKDMDQQIGDVYTSMMDREIEII 498
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQ 534
L + F D + A+ ELDC L A A ++ RP + E ++ ++N RH LQ
Sbjct: 499 HSLRERVMAFGDQIHVALMDCVELDCLLCFANAARLYDWHRPTIVEENIIHLENARHPLQ 558
Query: 535 EMTVDTFIPN--------------DTRIDNDGRIN--IITGPNYSGKSIYIKQVALIVF- 577
E+ V++F+PN D +ND N I+TG N GKS + V IVF
Sbjct: 559 ELCVESFVPNGCHLVGGVPTPSSTDVATNNDSERNIMILTGANGCGKSDRL--VCGIVFT 616
Query: 578 ---LSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSL 626
+S GSFVPAD A +G+ D ++ T E QS+FMIDL QV + LR T++SL
Sbjct: 617 FDVISPFGSFVPADKAIIGIVDKIFTRCQTKESVSKMQSAFMIDLSQVSLALRNCTARSL 676
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFY 685
+LDEFGK DG GL GTI++ + PKVL TH E+ N L + + +
Sbjct: 677 LILDEFGK-----DGAGLFCGTIDHLLKLGPSGPKVLAATHFHEIFNRHGLSEDLPINYA 731
Query: 686 TMSVLRPENNSTDV--------------EDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
M ++ ++ T + E I +LYR+ PG A S+ CA+L GVP V
Sbjct: 732 HMQIMFSSSSGTIIDTGRSDDSAENNLDEHITYLYRVAPGLAETSHAARCAMLQGVPRRV 791
Query: 732 IKRAAYV 738
I+RA YV
Sbjct: 792 IERAEYV 798
>gi|367005390|ref|XP_003687427.1| hypothetical protein TPHA_0J01720 [Tetrapisispora phaffii CBS 4417]
gi|357525731|emb|CCE64993.1| hypothetical protein TPHA_0J01720 [Tetrapisispora phaffii CBS 4417]
Length = 893
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 206/679 (30%), Positives = 325/679 (47%), Gaps = 105/679 (15%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGR----AKEGFSVFGMMNKCVTPMGRRLL 222
+SLN + +D +L+I PS G K FS+ ++++ + +L
Sbjct: 227 ISLNDRVLVDENTIHSLRIL-----PSIRKFGSDNLVTKGYFSLLELLDRTHLKSSKTML 281
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPSFIY 280
R+W L P E L R N + L +E + L T K D+ +IL K S S
Sbjct: 282 RSWILSPSCSSEVLEKRYNFLDILLSTENNSVFDGLQMTFKKYSDMNNILLKLKSGSL-- 339
Query: 281 TASDWTAF----------LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCIT 330
T +W K +C L ++N + I E L++ L +FDI T
Sbjct: 340 TIYNWRKLNENFQYGIILYKELCELDYLN----LEIDEDLKQ---LSDFDI--------T 384
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA------ 384
EL + + +ID + SK+ +REG E D LR+ Y L + L +
Sbjct: 385 DELTELSAYICNVIDFDESKDID-DIYIREGLFPEFDSLRETYNNLEDILSSIVMEVEEH 443
Query: 385 -----SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+E Q K F VYI QIG+L+ I L+D + +Q ++ +
Sbjct: 444 VQNNFEVEFSQ----SKTYFNA--VYIPQIGFLITI---DLNDIS-PLIQKITSSWEQIF 493
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
++ +T LDN +GDIY +I D++ I L ++ D L+ + ++D
Sbjct: 494 QTETNCYFKNEQTNTLDNEIGDIYCQIEDLKLDILLKLQQYVTTKHDLLITFGSIITKID 553
Query: 500 CFLSLALVAHQNNYMRPIL-TLEPLLDIQNGRHVLQEMTVDTFIPND------------- 545
+LSLA+V+ + NY++P L T L I+ GRH L E + +I ND
Sbjct: 554 VYLSLAVVSDELNYVKPTLVTNSNDLIIKKGRHPLFETILPHYIANDFLLEGGTLLNIEN 613
Query: 546 ------TRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+ ID N R+ I+TG N SGKS+++ QV LIV+L+HIG FVPA++A +G+ D
Sbjct: 614 CDANNGSWIDENAKRLAIVTGANASGKSVFMSQVGLIVYLAHIGCFVPAESARIGIVDMI 673
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
+ ++ SSF +D Q+ L T +SL L+DEFGKGT +G L GG ++
Sbjct: 674 LSNIETKESISNNHSSFELDNIQMMKNLSVMTERSLILMDEFGKGTGVIEGPSLFGGILS 733
Query: 651 YFVTCDVPPKVLVCTHLTELLNEGCL-PKSERLKFYTMSVLRPE------NNSTDVED-- 701
Y P+V+ C+H EL EG + P SE LKFYT ++ N + D E+
Sbjct: 734 YLKNRPDCPRVICCSHYHELFKEGIISPNSEGLKFYTTEIILNSDKIDKLNENMDKENRG 793
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN-NKHVERWSHENISAQD 760
I FLYR+ G S+G++CA + G+ E+I+RA ++ +N N +E +S +IS QD
Sbjct: 794 ITFLYRIKEGICNNSFGIYCASICGIAEEIIERATFLKRHTENGNDIMELFS--SISKQD 851
Query: 761 Q----QYKNAVEKMLAFDV 775
+ ++ +++ L++D+
Sbjct: 852 EITFDNNQSILKRFLSWDI 870
>gi|254167004|ref|ZP_04873857.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623860|gb|EDY36422.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 823
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 306/599 (51%), Gaps = 83/599 (13%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+K+L LD+T + L+IF H +G K ++++ MNKC TPMG RLL+ W RP
Sbjct: 237 DKYLILDSTTLKNLEIF-------HNVLGEDK--YTLYHTMNKCETPMGARLLKRWMQRP 287
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D++ +N RL+A+ + L S+ L +KDI I + S A
Sbjct: 288 LKDIDEINDRLDAVEELANKQLLQDSIRTILSRIKDIERIKTR---------VSLGRAVP 338
Query: 290 KSICSLLHVNKIFEVGISESLREQLRL-LNFD--IVEKAASCITTELAYVYELVIGIID- 345
+ + SL ESL++ +L +NF+ I++ +AS I Y E +I +I+
Sbjct: 339 RDLISL-----------KESLKQADKLRINFESKILKNSASKI-----YGIEGIIELIEN 382
Query: 346 -VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+N G G +++EG+ +ELDE+++I + ++ E + K + I
Sbjct: 383 AINGDYPVGEG-VIKEGYNEELDEIKRIASNAKLLIGKMEERE--RRSTGIKNL---KIG 436
Query: 405 YIHQIGYLMCIFEEKLDDT-----TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
Y +GY + + + L + L+ E +D E K L Y ++
Sbjct: 437 YNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSERFITD---ELKDLEYKILSAKD----- 488
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+I ++E I +D++ + D + + A +D SLA VA + NY RP +
Sbjct: 489 -----RIYEIENKIYKDILKKLGEMIDVIERTAKSIAIIDVISSLARVALEMNYTRPEVD 543
Query: 520 LEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLS 579
++I+NGRH + E+ D F+PNDT I++ R I+TGPN +GKS Y++QVALIV L+
Sbjct: 544 ESMDIEIRNGRHPVVELYTD-FVPNDTHINSAARFIILTGPNMAGKSTYMRQVALIVILA 602
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
+GSFVPAD A +G+ D S +T +S+FM+++ ++ +L AT +SL LLDE
Sbjct: 603 QMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVELANILNTATERSLILLDE 662
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVL 690
G+GT T DG+ + +I + + + + TH L++ E L + ++ Y ++V
Sbjct: 663 IGRGTSTYDGLA-IAWSITEHIHNSIRARTIFATHYHHLIDLENVL---DNVRNYHIAVK 718
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
++ ++F+ +++PG SYG+ A LAGVP +V+KRA +L + K +E
Sbjct: 719 ETQDG------LIFVRKVMPGGMSKSYGIEVAKLAGVPEKVVKRAKEILNLIEEKKVIE 771
>gi|393213027|gb|EJC98525.1| hypothetical protein FOMMEDRAFT_96519 [Fomitiporia mediterranea
MF3/22]
Length = 974
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 337/701 (48%), Gaps = 117/701 (16%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
GS + + A G LL L R + LE + G + + I ++ + L +F++++A A +LQ
Sbjct: 228 GSPLCLSAIGALLEHLAKVRAMADLENE--GISGLEIRAIESICLEQFMQINADALLSLQ 285
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+F T H + + + KEG S+FG++N T +GR LLR W LRP L L + +R +A+
Sbjct: 286 VFDTQSHAA-VHSDKTKEGLSLFGILNTTRTNLGRLLLRQWLLRPSLSLSVIAARHDAVE 344
Query: 245 FFLCSEELMAS--LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC-------SL 295
E ++ + + LK ++++P ++ + ++W +K +L
Sbjct: 345 CLTMPENIVTADAMCSHLKGLRNVPRTMRLLKTGK--AGLNEWQGLVKFTFHASLIKEAL 402
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ +N I E+ E L++ + +L+ T V + +D S G
Sbjct: 403 MELNHIGEI---EMLKKIIAILD-----------VTSFRDVGNAIHETVDWEESVHAGR- 447
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVAS-------------LELVQLPHLCKEMFVPC 402
VR +ELD+ + IY + L VAS L +V P L K + +
Sbjct: 448 VCVRPNIDEELDKWKHIYNGIDGVLSRVASQVSETVPPDYTTSLNVVYFPQLGKYLTLLS 507
Query: 403 IVYIHQ--IGYLMCIFEEKLDDTTLEQ----LQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+ ++ +G+L+CI K +D + EQ L G+ F FS ET +++ + + ++D
Sbjct: 508 LYHLTDFVVGFLICI--PKKEDQSPEQGIDVLDGWSFQFS---SET-HVYFKSDQMHDMD 561
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
+GD++ I+D E I + L+ I F D + +A + AELDC L A A +Y RP
Sbjct: 562 RHIGDLHPSIVDREIEIMQALLDKILQFDDAIAQACDILAELDCLLCFADAARLYSYRRP 621
Query: 517 ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--------DNDGR--------------I 554
+T + +L I GRH LQE VDTF+PND + D +G+ I
Sbjct: 622 TMTDKNVLCICQGRHPLQEQVVDTFVPNDVYVRGGLGSGPDPEGKEMPEDEDIPADTKGI 681
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIG---SFVPADAATVGLTD---SKHMTAE----- 603
++TG N GK +Y L FL SFVPA++ATVG+ D ++ T E
Sbjct: 682 LLLTGANACGK-VYRVASTLSFFLVSADVAFSFVPAESATVGIVDKIFTRVQTRETVSKI 740
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT-----LTEDGIGLLGGTINYFVT---- 654
QS+FM DL+QV + LR +T +SL LLDEFGKGT L G GLL G ++ ++
Sbjct: 741 QSAFMTDLNQVSLALRNSTPRSLILLDEFGKGTVSRGQLNNHGAGLLCGVLHSLLSRGPE 800
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDV--------------- 699
C PKVL+ TH ++ + L + F M +L P+ + D
Sbjct: 801 C---PKVLIATHFQDVFHSDLLESDLPVTFLHMEILLPDRSEEDEDQGQDMDANAYLRVL 857
Query: 700 --EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
E I +LYR PG +L S+ CA + G+P+ +++RA V
Sbjct: 858 RGETITYLYRFAPGLSLDSHAARCAQMFGLPSAIVRRAQRV 898
>gi|296816533|ref|XP_002848603.1| mismatch repair protein 5 [Arthroderma otae CBS 113480]
gi|238839056|gb|EEQ28718.1| mismatch repair protein 5 [Arthroderma otae CBS 113480]
Length = 832
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 203/759 (26%), Positives = 359/759 (47%), Gaps = 96/759 (12%)
Query: 14 VGVSYYDSSIRQLHVLE--VWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
VG SYY + +L+V+E V+ + ++DI+K + +P ++ S ++++S
Sbjct: 103 VGCSYYSAQEEKLYVMEDIVY----GELDIVDILKLEIEPTVLLLSLRADQSLEDPTHAG 158
Query: 72 DGTTEAPTVK----------LVKSSIFSYEQAWHRLIYLRVT------------GMD--- 106
G+ + + + F +E A +L L++ G++
Sbjct: 159 SGSRATSDIDSHLQLPYQLDVRPTQEFGFENARTKLTSLKINSKTSETVKFLIPGINFSH 218
Query: 107 DGLSIKERI---------CYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNA 157
DG E + +++ ++DM + + V +G +L L+ + +L+
Sbjct: 219 DGDITGETVDFTEQQGDLLHISGLIDMENCISVGCAGAILTYLQRKWASISLQGDPLSPR 278
Query: 158 SITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----AKEGFSVFGMMN 211
++ I ++ ++L K + ++ +LQI Q++ HP+ + G G+ +KEG S++G+ +
Sbjct: 279 TMDIKAIGMINLQKTMFINKDTLSSLQIIQSESHPNAFNQGPGKTSSGSKEGLSIYGLFH 338
Query: 212 K-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIP--- 267
TP G+RLL+ +FLRP +D +N R +S FL E A L + +K +K+I
Sbjct: 339 HFARTPQGKRLLKQYFLRPSVDPNVINQRHEFLSTFLRPEN-AAPLEQLIKSLKNIKNLR 397
Query: 268 ----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
H+ K ++ S + + F + S L + ++++L+E + DI
Sbjct: 398 PVVIHLRKGISTGS-----AKFRGFKGVVWSSLLDFAFHAIDVNQALKEITGVRGLDICT 452
Query: 324 KAASCITTELAYVYEL---VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
KA I +LA ++++ + I+D++ S E+ + T+VR G ELD+L++ Y + L
Sbjct: 453 KA--LIKLDLAQLHQVGSAIHEIVDLSLSIEE-HRTVVRPGIDKELDKLKETYSGMDGLL 509
Query: 381 EEVASLELVQLPH-LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+VA LP + KE+ V VY Q+G+ + I DD + + ++ +
Sbjct: 510 NQVAVNIAASLPEGMNKEINV---VYFPQLGFNIAI---PFDDRGVPVYGTNDEDWTQVF 563
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
R ++ + RE+D LGDIY I + E I L I + L++A + E+D
Sbjct: 564 NTENRAYFKDSRMREMDEKLGDIYGLICEREIEIVYQLAQKILTYEIMLVQASDICGEID 623
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITG 559
L+L A N +RP +T E ++ I+ GRH+L E TV +F+PNDT + G
Sbjct: 624 SLLALVQGASLNKLVRPRMTEENIISIKGGRHMLHEATVSSFVPNDTFVIGG------KG 677
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKHMTAE----QSSFMIDLHQVG 615
S + + L+ P T G + + QS+F DL QV
Sbjct: 678 SRSSAQDVNASSTELL----------PNGETTQGPSCHHRLHGSHRKVQSTFANDLQQVS 727
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEG 674
L QAT+++L ++DEFGKGT + DG GL G Y ++ + PKV+ TH E+ G
Sbjct: 728 FALSQATNRTLIIIDEFGKGTESADGAGLACGLFEYVLSMGNQRPKVIAATHFHEIFENG 787
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGH 712
L L+F M V R + ++ +VED + +LY+ P H
Sbjct: 788 FLKPRPELEFGHMEV-RVDTSTQNVEDQVTYLYKDRPRH 825
>gi|440781999|ref|ZP_20960227.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
gi|440220717|gb|ELP59924.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
Length = 875
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 309/603 (51%), Gaps = 59/603 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID++ ++ ++ +DA + L++ +T + S G S+ +++K T MG R
Sbjct: 248 IDNMNYYNVVDYMSIDANSRRNLELTETLREKSKKG--------SLLWVLDKTSTAMGGR 299
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LR W P++D + +N RL+++ F + L L LK V DI ++ K ++ S
Sbjct: 300 QLRRWIEEPLIDEKAINQRLDSVQEFTENLSLHEDLKNALKQVYDIERLIGKISTLSV-- 357
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A + SI L + I + G SL + ++ N D +L +Y ++
Sbjct: 358 NAKEMIFLKNSIEKLPAIKDILK-GCKSSLLKGMQE-NLD-----------DLKDIYNIL 404
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ + S G ++++G+ E+DELRQ E++ ++ S E + K + V
Sbjct: 405 DKSVLDSPSISIKEGNIIKDGYNTEVDELRQAKTHGKEWIAKLESSEREETG--IKSLKV 462
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + I + + L + ++ +R Y T + ++++ +
Sbjct: 463 G---YNKVFGYYIEITK-----SNLNLVPEGKYIRKQTLANCER--YITEELKQMEEKIL 512
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K++++E + ++ I D + K+ +ELDC S A VA +NNY +P ++
Sbjct: 513 GAEEKLINIEYELFVEIRDKISTHIDRMKKSAKLLSELDCLCSFASVALENNYCKPQIST 572
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ + I+ GRH + E ++ TF+ NDT+I+ D ++ +ITGPN +GKS Y++QVALIV
Sbjct: 573 DGAIKIEEGRHPVVENMLSAGTFVANDTKINTTDEQLMLITGPNMAGKSTYMRQVALIVI 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
+S IGSFVPA A + + D S + A +S+FM+++ +V +L+ AT++SL +L
Sbjct: 633 MSQIGSFVPAKNAVISVCDRIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATTKSLIIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + Y T ++ K L TH EL EG + LK Y++
Sbjct: 693 DEVGRGTSTYDGLSIAWSVVEYLCTNKNLKCKTLFATHYHELTALEGVISG---LKNYSI 749
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQ--NN 745
+V + ++N IVFL ++V G A SYG+ A LAG+P +V KRA +LE + N+
Sbjct: 750 AVKQIQDN------IVFLRKIVSGGADQSYGIEVAKLAGLPEKVTKRAKEILEELEKDND 803
Query: 746 KHV 748
K V
Sbjct: 804 KEV 806
>gi|254975573|ref|ZP_05272045.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
gi|255092961|ref|ZP_05322439.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
gi|255314702|ref|ZP_05356285.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
gi|255517377|ref|ZP_05385053.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
gi|255650483|ref|ZP_05397385.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
gi|260683593|ref|YP_003214878.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260687253|ref|YP_003218387.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384361214|ref|YP_006199066.1| DNA mismatch repair protein mutS [Clostridium difficile BI1]
gi|400927376|ref|YP_001088483.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|423089220|ref|ZP_17077582.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
gi|347595678|sp|Q187T6.2|MUTS_CLOD6 RecName: Full=DNA mismatch repair protein MutS
gi|260209756|emb|CBA63548.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260213270|emb|CBE04805.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|328887644|emb|CAJ68852.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|357558356|gb|EHJ39850.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
Length = 947
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 303/590 (51%), Gaps = 57/590 (9%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ LD L++ QT + G K+G S+ +++K T MG RLLR + P+
Sbjct: 263 EYMVLDMFTRTNLELTQTIR-------GNKKKG-SLLHVLDKTSTAMGGRLLRKYVEEPL 314
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ + +RL+ I L L++ LK + DI I K AF +
Sbjct: 315 INKSKIENRLDVIEEIKDDFILREDLNDILKNIYDIERICGKI-------------AFER 361
Query: 291 -SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+ L+H+ E +L++ + L N I+++ S + +L +Y L+ I +
Sbjct: 362 VTPKELIHLKNSIEK--LPNLKDTINLSNAKILKEYVSEMD-KLDDIYNLIDEAILEEPT 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G +++ F DEL ELR+I + ++E+ + E + K + I +
Sbjct: 419 ITIKDGNIIKSDFSDELKELREISKNGAFLVKEIENREREKTG--VKSL---KIGFNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L++ + S+ + Y TP+ +E++ + KI +
Sbjct: 474 GYYIEITKANFKQAKLDETYIRKQTLSNAER------YITPELKEIEEKILHAEEKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I ++ I D + K A +D F+SLA VAH NNY++P + LDI+NG
Sbjct: 528 EYEIFVEIRDTIYKNIDRIQKVAKTIANIDVFVSLATVAHINNYVKPAINENNKLDIRNG 587
Query: 530 RHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E V + F+PNDT ++ + INIITGPN SGKS Y++Q A+I ++HIGSFVP
Sbjct: 588 RHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVP 647
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A++A + + D S ++ QS+FM+++++V ++L+ AT +SL +LDE G+GT T
Sbjct: 648 AESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTST 707
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGI L + Y + ++ K L TH EL + + + +K Y+++V D
Sbjct: 708 YDGISLAWSIVEY-IQKNIRCKTLFATHYHELTD--LEEEFKEVKNYSIAV------KED 758
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
E I+FL +++P A SYG++ A LA +P EVI+RA Y+L+ + N HV
Sbjct: 759 GEGIIFLRKIIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLEKN-HV 807
>gi|255306973|ref|ZP_05351144.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
Length = 947
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 303/590 (51%), Gaps = 57/590 (9%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ LD L++ QT + G K+G S+ +++K T MG RLLR + P+
Sbjct: 263 EYMVLDMFTRTNLELTQTIR-------GNKKKG-SLLHVLDKTSTAMGGRLLRKYVEEPL 314
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ + +RL+ I L L++ LK + DI I K AF +
Sbjct: 315 INKSKIENRLDVIEEIKDDFILREDLNDILKNIYDIERICGKI-------------AFER 361
Query: 291 -SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+ L+H+ E +L++ + L N I+++ S + +L +Y L+ I +
Sbjct: 362 VTPKELIHLKNSIEK--LPNLKDTINLSNAKILKEYVSEMD-KLDDIYNLIDEAILEEPT 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G +++ F DEL ELR+I + ++E+ + E + K + I +
Sbjct: 419 ITIKDGNIIKSDFSDELKELREISKNGAFLVKEIENREREKTG--VKSL---KIGFNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L++ + S+ + Y TP+ +E++ + KI +
Sbjct: 474 GYYIEITKANFKQAKLDETYIRKQTLSNAER------YITPELKEIEEKILHAEEKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I ++ I D + K A +D F+SLA VAH NNY++P + LDI+NG
Sbjct: 528 EYEIFVEIRDTIYKNIDRIQKVAKTIANIDVFVSLATVAHINNYVKPAINENNKLDIRNG 587
Query: 530 RHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E V + F+PNDT ++ + INIITGPN SGKS Y++Q A+I ++HIGSFVP
Sbjct: 588 RHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVP 647
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A++A + + D S ++ QS+FM+++++V ++L+ AT +SL +LDE G+GT T
Sbjct: 648 AESADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTST 707
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGI L + Y + ++ K L TH EL + + + +K Y+++V D
Sbjct: 708 YDGISLAWSIVEY-IQKNIRCKTLFATHYHELTD--LEEEFKEVKNYSIAV------KED 758
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
E I+FL +++P A SYG++ A LA +P EVI+RA Y+L+ + N HV
Sbjct: 759 GEGIIFLRKIIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLEKN-HV 807
>gi|255655930|ref|ZP_05401339.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
gi|296450648|ref|ZP_06892401.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296879235|ref|ZP_06903230.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
gi|296260492|gb|EFH07334.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296429778|gb|EFH15630.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
Length = 947
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 302/590 (51%), Gaps = 57/590 (9%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ LD L++ QT + G K+G S+ +++K T MG RLLR + P+
Sbjct: 263 EYMVLDMFTRTNLELTQTIR-------GNKKKG-SLLHVLDKTSTAMGGRLLRKYVEEPL 314
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ + +RL+ I L L++ LK + DI I K AF +
Sbjct: 315 INKSKIENRLDVIEEIKDDFILREDLNDILKNIYDIERICGKI-------------AFER 361
Query: 291 -SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+ L+H+ E +L++ + L N I+++ S + +L +Y L+ I +
Sbjct: 362 VTPKELIHLKNSIEK--LPNLKDTINLSNAKILKEYVSGMD-KLDDIYNLIDEAILEEPT 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G +++ F DEL ELR+I + ++E+ + E + K + I +
Sbjct: 419 ITIKDGNIIKSDFSDELKELREISKNGAFLVKEIENREREKTG--VKSL---KIGFNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L++ + S+ + Y TP+ +E++ + KI +
Sbjct: 474 GYYIEITKANFKQAKLDETYIRKQTLSNAER------YITPELKEIEEKILHAEEKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I ++ I D + K A +D F+SLA VAH NNY++P + LDI+NG
Sbjct: 528 EYEIFVEIRDTIYKNIDRIQKVAKTIANIDVFVSLATVAHINNYVKPAINENNKLDIRNG 587
Query: 530 RHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E V + F+PNDT ++ + INIITGPN SGKS Y++Q A+I ++HIGSFVP
Sbjct: 588 RHPVVENIVGEENFVPNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVP 647
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A+ A + + D S ++ QS+FM+++++V ++L+ AT +SL +LDE G+GT T
Sbjct: 648 AEYADIPILDRIFTRVGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTST 707
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGI L + Y + ++ K L TH EL + + + +K Y+++V D
Sbjct: 708 YDGISLAWSIVEY-IQKNIRCKTLFATHYHELTD--LEEEFKEVKNYSIAV------KED 758
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
E I+FL +++P A SYG++ A LA +P EVI+RA Y+L+ + N HV
Sbjct: 759 GEGIIFLRKIIPQGADKSYGIYVAKLAKLPDEVIERAKYILKDLEKN-HV 807
>gi|366989143|ref|XP_003674339.1| hypothetical protein NCAS_0A14010 [Naumovozyma castellii CBS 4309]
gi|342300202|emb|CCC67959.1| hypothetical protein NCAS_0A14010 [Naumovozyma castellii CBS 4309]
Length = 874
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 196/672 (29%), Positives = 315/672 (46%), Gaps = 73/672 (10%)
Query: 115 ICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESG---NASITIDSVIEVSLNK 171
+C + +D +E+ +L + +D L SG + S I V + L+
Sbjct: 150 LCGIVESVDNSTEITGSTVRCILTNYKKHAELDDLNTYSSGRTHDISNPILHVESIDLSN 209
Query: 172 FLKLDATAHEALQIFQT-DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
L +D ++LQI K + IG K S+ ++N + +L++W L P+
Sbjct: 210 VLLIDENTLKSLQILPIFKKTGTDKTIG--KRDMSILELLNHVSNGYSKNILKSWLLAPL 267
Query: 231 LDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKF---NSPSFIYTASDW 285
+ + +R + + FL + E K D+ +ILK+ N I+T +
Sbjct: 268 RKKKEIETRYDVVDIFLGKNNSLFFEEIQEIFKGFPDLFNILKQLQHGNESVTIWT--NL 325
Query: 286 TAFLKSICSLLH-VNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
FL+ L ++K+ V SE+L ++ + N D+ T + V I
Sbjct: 326 VQFLERAIRLTDCLSKLDIVSTSENLIRRI-ISNVDL---------TVFKTLLRKVKQTI 375
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----------LELVQLPHL 394
D SK L+ EG + LD+ + IY EL L E+A +E P +
Sbjct: 376 DFETSKYNKEIVLI-EGINERLDQHKLIYNELEVILTEIAKQAENDLFQNLMERNVSPDM 434
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF--EFAFSDMDGETKRLFYHTPKT 452
++ V VYI Q+GYL+ + D+ +++L + ++++ LFY
Sbjct: 435 TRDKIVNA-VYIPQLGYLVTV------DSVIQELSDITTQLGWNEVFRTNTDLFYKNEAV 487
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+LD GDIY I D+E + L + L++ A+L+ +S A ++ +N
Sbjct: 488 LQLDQKYGDIYASISDLEVEVLHSLQECVIKERLKLMEYFQLFAQLEVLVSFAYISQRNG 547
Query: 513 YMRPILTL-EPLLDIQNGRHVLQEMTVDTFIPNDTRI------------DNDGRINIITG 559
Y+RP L+ E +LDI++GRH L E VDT+IPND + + + RI IITG
Sbjct: 548 YVRPELSEDECVLDIKSGRHPLYENIVDTYIPNDLELLGGSFDDTSWSREGNKRIGIITG 607
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDL 611
N SGKS+++ Q LIV+L+HIG FVP D+A +GL D ++ T + +SSF +D
Sbjct: 608 ANASGKSVFLIQTGLIVYLAHIGCFVPCDSARIGLVDRILTRTRTQDTVSLLKSSFELDS 667
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELL 671
Q+ L Q + +SL L+DEFGKGT DG L G I P+VL CTH EL
Sbjct: 668 LQMARCLSQMSKKSLILIDEFGKGTDIIDGPSLFGAIIQQLAESKDCPRVLACTHFHELF 727
Query: 672 NEGCLPKS-ERLKFYTMSVLRPENNSTDVED-------IVFLYRLVPGHALLSYGLHCAL 723
N L ++ + +Y VL + + + D I FLYR+ G + S+G++CA
Sbjct: 728 NTDVLDEAFPGVNYYMTQVLLNQAHISSSRDTLCKNVGITFLYRIKEGISRQSFGVYCAK 787
Query: 724 LAGVPAEVIKRA 735
+ G+ ++KRA
Sbjct: 788 ICGIKESIVKRA 799
>gi|153811376|ref|ZP_01964044.1| hypothetical protein RUMOBE_01768 [Ruminococcus obeum ATCC 29174]
gi|149832503|gb|EDM87587.1| DNA mismatch repair protein MutS [Ruminococcus obeum ATCC 29174]
Length = 872
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 293/592 (49%), Gaps = 70/592 (11%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +KF+ +D+++ L++ +T + G S+ +++K T MG R LR +
Sbjct: 256 TADKFMLIDSSSRRNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRGYVE 307
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D E +N RL A+ L + E L + D+ ++ + + S D A
Sbjct: 308 QPLIDAEEINLRLGAVEELTQKPMLRDEIREYLNPIYDLERLISRISYQS--ANPRDMVA 365
Query: 288 FLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
F S+ + ++ +I FE I + + E + L D+ + IT E
Sbjct: 366 FASSLEMIPYIRQILQEFEAPILKQIFEDMDPLE-DVTDLIKRAITDEPPLA-------- 416
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+ G ++REG+ ++D+ R + ++L E+ + E + + I
Sbjct: 417 -------QKDGGIIREGYNADVDKYRHSRTDGKKWLAELEAREKERTG-----IKTLKIK 464
Query: 405 YIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
Y GY + + F++++ D + + Q T Y T + ++L++L+
Sbjct: 465 YSRVFGYALEVTNSFKDQVPDNYVRK-QTL----------TNAERYITQELKDLEDLILG 513
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
++ +E + D+ + + K A LD F SLALVA +NN++RP +
Sbjct: 514 AEDRLYALEYELFADVRDKVGKEVVRIQKTAKAIAALDVFASLALVAERNNFVRPKINEN 573
Query: 522 PLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFL 578
+LDI+NGRH + E + D FI NDT +DN R++IITGPN +GKS Y++Q ALIV +
Sbjct: 574 GVLDIKNGRHPVVEQMIENDMFIANDTYLDNQKKRVSIITGPNMAGKSTYMRQTALIVLM 633
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ IGSFVPA+ A +G+ D S + + QS+FM+++ +V +LR ATS+SL +LD
Sbjct: 634 AQIGSFVPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSRSLLILD 693
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
E G+GT T DG+ + I + + K L TH EL EG +P + Y ++
Sbjct: 694 EIGRGTSTFDGLAIAWSVIEHISNTKLCGAKTLFATHYHELTELEGKIPG---VNNYCIA 750
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
V +DIVFL ++V G A SYG+ A LAGVP VI RA ++E
Sbjct: 751 V------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVINRAKELVE 796
>gi|291546135|emb|CBL19243.1| DNA mismatch repair protein MutS [Ruminococcus sp. SR1/5]
Length = 872
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 176/591 (29%), Positives = 297/591 (50%), Gaps = 58/591 (9%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
S+ S K++ +D+++ L++ +T + G S+ +++K T MG R L
Sbjct: 251 SIRPYSAEKYMLIDSSSRRNLELVETMREKQKRG--------SLLWVLDKTKTAMGARTL 302
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA 282
R++ +P++D E + RL A+ + E L + D+ ++ + + S
Sbjct: 303 RSYVEQPLIDAEEIEKRLGALEELNAKPMDRDEIREYLNPIYDLERLISRISYKS--ANP 360
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D +F S+ L ++ +I ++E L +N D+ L+ + +L+
Sbjct: 361 RDLVSFASSLEMLPYIKQI----LAEFKSPLLMQINEDM---------DPLSDITDLIRN 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
I + + G ++REG+ +++D+ R+ + ++L E+ + E + K +
Sbjct: 408 SIADDPPLAQKDGGIIREGYNEDVDKFRRSRTDGKKWLSELEARERERTG--IKSL---K 462
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y GY + + T + L ++ +R Y T + ++L++L+
Sbjct: 463 IKYNRVFGYSLEV------TNTFKDLVPEDYIRKQTLTNAER--YITQELKDLEDLILGA 514
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
K+ +E + D+ + + + A LD F SLALVA +NN++RP +
Sbjct: 515 EDKLYALEFELFSDIRDQVGAEVVRIQRTAKAVAALDVFASLALVAQRNNFVRPKINETG 574
Query: 523 LLDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLS 579
L+DI+NGRH + E + D FIPNDT +DN RI+IITGPN +GKS Y++Q ALIV ++
Sbjct: 575 LIDIRNGRHPVVEQMIENDMFIPNDTYLDNHKKRISIITGPNMAGKSTYMRQTALIVLMA 634
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPAD+A +G+ D S + + QS+FM+++ +V +LR ATS+SL +LDE
Sbjct: 635 QIGSFVPADSANIGVVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSRSLLILDE 694
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DG+ + I + + K L TH EL EG L + Y ++V
Sbjct: 695 IGRGTSTFDGLSIAWAVIEHISNTKLCGAKTLFATHYHELTELEGKLSG---VNNYCIAV 751
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+DIVFL ++V G A SYG+ A LAGVP VI+RA ++E
Sbjct: 752 ------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIQRAKELVE 796
>gi|71415535|ref|XP_809831.1| mismatch repair protein MSH5 [Trypanosoma cruzi strain CL Brener]
gi|70874272|gb|EAN87980.1| mismatch repair protein MSH5, putative [Trypanosoma cruzi]
Length = 784
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 297/640 (46%), Gaps = 78/640 (12%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCV 214
+ + I V EV L ++ LQ+ +T+ HP + GIGRAKEG S+ ++++
Sbjct: 154 RSELPIADVAEVPPLGLLYIEQETLSGLQLLRTEPHPMDYQGIGRAKEGLSLLSVVDRTC 213
Query: 215 TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKK 272
+ +GR LLR WFL P+ D L R + +SFF E +LM L L++++ I K
Sbjct: 214 SVLGRALLRQWFLLPVRDESELRRRYDVVSFFTMQENYDLMMQLRRALRHLRITNSIFTK 273
Query: 273 FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
+ +T +++ + L+++ L + + + R + IV ASC T +
Sbjct: 274 IRAAK--HTTNEYESLLRTVRGFLRIASLL------TPRAHFSPMFLRIV---ASCQTNQ 322
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELV 389
L + L+ + +R +R GF +LDEL + L E L VA E
Sbjct: 323 LEEISRLIDEGVSFSRDPGAALSKTYVHIRPGFDAKLDELCAHFTHLDEVLANVAQQEAR 382
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
LP L V C V+ GY++ + L E + G+E F +G F+ T
Sbjct: 383 CLPPLWGLCSVVC-VFAPCWGYVITLPRFSL-PVGREDIPGWELLFQTEEGP----FFKT 436
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
P TR +D +GD+ IL E I R+L + + S L+ ++ AELDC + AL A
Sbjct: 437 PLTRRMDEEIGDLRSAILVREGEIQRELDKRLIVLSPALIP-LHLCAELDCLMGFALAAL 495
Query: 510 QNNYMRPILTLEP-LLDIQNGRH-VLQEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKS 566
+ + RP + EP +L I+ G H + +P I ++ R+ ++TG N SGKS
Sbjct: 496 EGQWSRPEIVKEPGVLVIERGFHPIFARTAAHQVVPYSINIRTSNQRVCLLTGANGSGKS 555
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS----------------KHMTAE-QSSFMI 609
I I VA VFL+HIG +VP AT+GL D+ T E SSF
Sbjct: 556 ILITAVAHAVFLAHIGCYVPCTHATIGLFDTLMSLHAVSYSSRDRTLASTTKELHSSFGN 615
Query: 610 DLHQVGMMLRQATS----------QSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVP 658
+L + ML++ ++ +SL +LDEFGKGTL+ DG LL +I F++ D
Sbjct: 616 ELVSMSRMLQRCSTRNKEGGAGSGRSLLVLDEFGKGTLSLDGAALLAVSIRSFISFGDRR 675
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST-----DVED-------IVFLY 706
P VL+ TH E+L +P+ E + + L P + DV + +V Y
Sbjct: 676 PIVLLATHYVEVLQPQLIPREEIMVLEMQTTLVPTARTGGEGGEDVREGFIGGSQLVHSY 735
Query: 707 RLVPGHAL-----------LSYGLHCALLAGVPAEVIKRA 735
R+ P AL S+ L AL VP +++RA
Sbjct: 736 RVAPVQALSSMDTIQQKGMTSHALRFALQFSVPPLLLQRA 775
>gi|410075894|ref|XP_003955529.1| hypothetical protein KAFR_0B00960 [Kazachstania africana CBS 2517]
gi|372462112|emb|CCF56394.1| hypothetical protein KAFR_0B00960 [Kazachstania africana CBS 2517]
Length = 890
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 185/627 (29%), Positives = 310/627 (49%), Gaps = 63/627 (10%)
Query: 154 SGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNK 212
S ++ I+ V ++ LN+ + +D +L IF T K + ++G FS++ ++N
Sbjct: 217 SDDSDSLINHVKQLDLNERMFIDEDTLSSLLIFPTLKKTGQDKM--IEDGCFSIYDLLNH 274
Query: 213 CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV-KDIPHIL- 270
+ + R++L++W P++D++ + R N + L + A L+E L+ V K +P +
Sbjct: 275 TSSNLSRKILKSWLASPLVDIKKIQRRQNMVKALLDTNN--ALLYEDLRRVIKKLPDMFI 332
Query: 271 ---KKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ N + + T + F+K+ ++ + + ++SL IV+ +
Sbjct: 333 ASNQLQNGRASVRTWLNVYEFVKTSIAVYKIISALKTDRNDSL----------IVDIKSQ 382
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA-SL 386
L + + + IID+ S+E +++EG + LDE R+IY +L L +VA +
Sbjct: 383 VDFKVLKVLQKKLSSIIDIENSRE-SKSLVIQEGVDERLDECRRIYNKLETTLSDVAVNA 441
Query: 387 EL----VQLPHLCK----EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
E+ VQ H E + +YI Q+GYL+ I + LE L +F + +
Sbjct: 442 EMLVCEVQQRHSNSKSAIEEGIINAIYIPQLGYLVSIGQSLA--LNLEILS--DFGWREE 497
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+++ +LD GDIY I D+E + L + + L K AEL
Sbjct: 498 FRTDTHVYFKNDDVLKLDEKFGDIYTVISDLEIEVLYSLQKEVLEETILLQKCNKLFAEL 557
Query: 499 DCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTR-----IDND- 551
D S A V+ Y P L LE ++I+ GRH + E VD++IPND + D++
Sbjct: 558 DVLASFAQVSFIRGYTEPELILEQCSIEIKGGRHPIYETLVDSYIPNDFKSIGGNFDDEF 617
Query: 552 -------GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS------- 597
R+ ++TGPN SGKS+++ QV LIVFL+ IG FVPA A +G+ D
Sbjct: 618 WVSKVGLDRVTVLTGPNSSGKSVFLTQVGLIVFLAQIGCFVPAQKARIGIVDKLLSRIRT 677
Query: 598 -KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
+ +T E SSF +D Q+ L T++SL L+DEFGKGT DG L G + V
Sbjct: 678 QESLTKEHSSFELDSLQMAKCLNLGTAKSLILIDEFGKGTDVIDGPSLFGAIVKTIVREP 737
Query: 657 VPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPEN------NSTDVEDIVFLYRLV 709
P+V+ CTH EL E L S +++Y ++ E+ + T+ I FLY++
Sbjct: 738 YCPRVIACTHFHELFKEEILTTSIPGIQYYKTEIILNESGHVSEASVTENVGITFLYKVK 797
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAA 736
G + S+G++CA + GV +E+++RAA
Sbjct: 798 EGRSTKSFGVYCAKICGVKSEIVERAA 824
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 176/631 (27%), Positives = 309/631 (48%), Gaps = 65/631 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ +I + ++ LD + L++ +T + S G ++ +++ T MG R
Sbjct: 258 INKLIPYTTTSYMLLDPSTRRNLELTRTIRDSSRKG--------TLLWVLDYTQTAMGGR 309
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W +P+ D+ + +RL+ + + + + L + V D+ + + S
Sbjct: 310 LLKTWLEQPLTDITAIETRLDTVEELVNNVFMRGDLQKLFTEVYDLERLAGRIAFGS--A 367
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D A KS+ L V +I E S L + R L DI+E AS I +
Sbjct: 368 NARDLIALKKSLQVLPKVKEILEKAYSPGLIQLYRQL--DILEDVASLIESA-------- 417
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
ID N G ++++G+ +E+D LR+ + ++ E+ E + K + V
Sbjct: 418 ---IDDNPPITLRDGGIIKKGYNEEIDRLRKASRDGKTWIAELERREKERTG--IKSLKV 472
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + + LD + ++ A ++ + TP +E ++L+
Sbjct: 473 G---YNKVFGYYIEVTRANLDAVPDDYIRKQTLANAER--------FITPDLKEYESLIL 521
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI +E + + + I + + +A + A+LD +++ A A +NNY +PI+
Sbjct: 522 GAEEKITQLEYELFQAVREKISNSTARIQQAASIVAQLDVYIAFAEAAIRNNYTKPIIND 581
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVF 577
+ ++ I +GRH + E M +F+PNDT +D G R++IITGPN +GKS Y++QVALIV
Sbjct: 582 DGIIKITDGRHPVVEKFMPEGSFVPNDTYLDCSGYRMDIITGPNMAGKSTYMRQVALIVL 641
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGS+VPA A +G+ D S + QS+FM+++++V +L AT++SL +L
Sbjct: 642 MAQIGSYVPASEARIGIVDRIFTRVGASDDLATGQSTFMVEMNEVANILNNATAKSLIIL 701
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ + Y + + + K L TH EL +E Y
Sbjct: 702 DEVGRGTSTFDGLSIAWAVAEYILDPEKIGAKTLFATHYHEL--------TELADIYPGV 753
Query: 689 VLRPENNSTDV----EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+N++ V +DI+FL +++PG A SYG+ A LAG+P EV+ +A +L +
Sbjct: 754 ----QNHNIAVKEKGDDIIFLRKIIPGGADRSYGIQVARLAGLPGEVLGKAKEILRTLEV 809
Query: 745 NKHVERWSHENISAQDQ-QYKNAVEKMLAFD 774
N+ + E +A+ + N V ++ FD
Sbjct: 810 NEDAVKTKREVAAARKKCSDGNNVIQLRMFD 840
>gi|353235640|emb|CCA67650.1| related to MSH5-meiosis-specific protein [Piriformospora indica DSM
11827]
Length = 823
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 211/764 (27%), Positives = 360/764 (47%), Gaps = 98/764 (12%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 61
++ + I R+ +Y+D L ++E E+ N + L + Q P + TS++S+
Sbjct: 41 EICLTIICTNGRLACAYFDPITGTLFIMEDTEE-NKYYDLAARILEQVCPGFVLTSSRSD 99
Query: 62 ESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTG------MDDGLSIKERI 115
E F+ L+ D + V+ K F+ + RL L + +D +S ++ I
Sbjct: 100 ELFIDFLR--DQLNDHLQVRPWKE--FTAKHGTERLQTLPLLAGQLAEEEEDSVSAQDNI 155
Query: 116 -CYLNSMMDM-GSEVQVRAS--GGLLAVLENER---------IVDTLEQKESGN-ASITI 161
+++S M S +Q RAS G V E ++D L + + N A +
Sbjct: 156 DNFMSSRGTMHPSLIQWRASIRSGNFTVDEGRSQLCMSSIGALIDYLTRSKVANDAGWDV 215
Query: 162 DSVIEV------SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVT 215
+ + +V SL +++++ + A +LQ+F ++KH S + KEG S++G++N+ T
Sbjct: 216 EELDDVKRIEYFSLAEYMQIHSDALLSLQVFLSEKHAS-IYSDSVKEGLSIYGILNQTRT 274
Query: 216 PMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKF 273
P G LLR W LRP L ++ R +AIS E A+LH+ + K + L +
Sbjct: 275 PFGGALLRQWLLRPSTSLSTISERHDAISCLTAIENQATAAALHKNIVGTKGVLLALARL 334
Query: 274 NSPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTE 332
T +W A ++ S+ V + E+ + +R LL ++
Sbjct: 335 RKGK--ATLQNWKAVIQFWVSVTLVRGSLLELHHTLHIRGSQELLEM--------IGSSH 384
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
A V + + IID S G +V+ +ELD+ ++ + FL +VA + L
Sbjct: 385 FAEVAQAINDIIDWEESTNLGR-IVVKPLVDEELDQWKETMATMDSFLSKVAQGIVATLA 443
Query: 393 HLCKEMFVP-CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+F +VY Q+GYL+ + E+ L+ + F+F ++ L++
Sbjct: 444 PEEATLFSEFNVVYFPQLGYLISVSGPTEQPLEPNDCPEGWVFQFMTNNT------LYFK 497
Query: 449 TPK--------------TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
+ K ++LD +GD+ I D E I + L + + +SD++
Sbjct: 498 SDKMHGMKFSQANSHSFVKDLDECIGDVNTLIADREIEIIQSLQAEVLNYSDNIATMCER 557
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT-------- 546
A LDC LSLA A + ++RP + + +LDI++GRH +QE+ + F+ ND
Sbjct: 558 LAVLDCLLSLADAARRYQWIRPEMCEDVVLDIRDGRHPIQELVDENFVANDVYAVGGTPS 617
Query: 547 ----------RIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG--- 593
+ I I TG N SGKSIY+KQ ALI +L+ +GSFVPA +A +G
Sbjct: 618 SNHSESSSSSQEKTGNSIVICTGANASGKSIYLKQCALIPYLAQVGSFVPAASARLGIIH 677
Query: 594 -----LTDSKHMTAEQSSFMIDLHQVGMMLRQATS-QSLCLLDEFGKGTLTEDGIGLLGG 647
+ + ++ QS+ MI+L+QV + +R T+ +++ LLDEFGKGTL+ DG GL G
Sbjct: 678 RIFTRIQTRESVSKMQSALMIELNQVSLAIRHGTTPRTIVLLDEFGKGTLSSDGAGLFTG 737
Query: 648 TINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
I +F++ D+ P V+ TH E+ + L + F MSV+
Sbjct: 738 VIKHFLSLGDMCPLVIAATHFHEIFDASMLSPDLPISFVHMSVM 781
>gi|193783527|dbj|BAG53438.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 262/504 (51%), Gaps = 41/504 (8%)
Query: 309 SLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
LR+ R L + + A + +L ++ L+ ++D S + T V E+
Sbjct: 19 GLRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPEI 77
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDT 423
DE ++ LP FL EVA EL L + +P ++YI IG+L+ I + +
Sbjct: 78 DEKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMVEA 132
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
+ ++ G +F F ++L Y + +T+ELD LLGD++ +I D E + L +
Sbjct: 133 SDFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLA 188
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFI 542
+ L + ++ A+ LD L+LA A Y RP + + L + IQNGRH L E+ TF+
Sbjct: 189 RAAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRHPLMELCARTFV 248
Query: 543 PNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS---- 597
PN T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+
Sbjct: 249 PNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTR 308
Query: 598 ----KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
+ ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+ LL + +++
Sbjct: 309 IHSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRHWL 368
Query: 654 ----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
TC P + V T+ L+ LP+ +++ TM D D+VF Y++
Sbjct: 369 ARGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGNDLVFFYQVC 419
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEK 769
G A S+ H A AG+P +++ R V + ++ K ++ Q + + V+K
Sbjct: 420 EGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRSGKPIKPVKDLLKKNQMENCQTLVDK 479
Query: 770 MLAFDVLKG--DLRLFF-QDLLPS 790
+ D+ DL +F Q++LP+
Sbjct: 480 FMKLDLEDPNLDLNVFMSQEVLPA 503
>gi|421076048|ref|ZP_15537050.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
gi|392525907|gb|EIW49031.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
Length = 864
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 313/624 (50%), Gaps = 60/624 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ +I + ++L +D+T+ L++ + + G K+ ++ +++ T MG R
Sbjct: 251 INRLINYNAFEYLTIDSTSMRNLEVTRNVRD------GGKKD--TLLYVLDYTKTAMGGR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+++ ++ R ++I+ L L ++HETL + D+ IL + +
Sbjct: 303 LLKKWLEYPLMNTTHIIQRQDSIAELLEKPTLRQTIHETLANIYDLERILTRIEVGT--A 360
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+A D A S+ L +++EQL+ N + + T + V +
Sbjct: 361 SARDLIALKSSLVVL------------PTIKEQLQKTNTIFLSNLHFYLHTHVDLVTLVD 408
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I+D N G L++ G+ ELDEL I + +F++++ + E K + V
Sbjct: 409 TAIVD-NPPFSVREGGLIKRGYDLELDELHTIARDSKQFVQDIETRERENTG--IKSLKV 465
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + + L ++ A ++ Y TP+ +E ++ +
Sbjct: 466 G---YNKVFGYYIEVTHSHTASVPLSYVRKQTLANAER--------YITPELKEFESKIL 514
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI+ +E + + HI ++ + + A+LD +SL+ VA +NNY+RP +T
Sbjct: 515 GAQEKIVTIEYRLFSKIRDHIKVYIKEIQETARQLAQLDAIISLSEVAFRNNYIRPTITQ 574
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ I++GRH + E + + F+PND+ +++ I IITGPN +GKS Y++QVAL+V
Sbjct: 575 TREITIKDGRHPIVERLLKRELFVPNDSELNHHSNEIMIITGPNMAGKSTYMRQVALLVL 634
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSF+PA A + D S ++ QS+FM+++++V +L+ ATSQSL +L
Sbjct: 635 MAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQSTFMVEMNEVAQILKHATSQSLIIL 694
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ + I Y + V K L TH EL K +K Y+++V
Sbjct: 695 DEIGRGTSTFDGMSIARAVIEY-IKERVKAKTLFATHYHELTELADYHKI--VKNYSVAV 751
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
E S D+VFL R++PG A SYG+H A LAG+P +VIKRA +L + N HV+
Sbjct: 752 --KERGS----DVVFLRRIIPGGADKSYGIHVAQLAGLPQKVIKRAQELLVELEQN-HVQ 804
Query: 750 RWSHENISAQDQQYKNAVEKMLAF 773
+N+S ++ A M F
Sbjct: 805 ---SQNLSLSVEESAAATTPMSLF 825
>gi|225567942|ref|ZP_03776967.1| hypothetical protein CLOHYLEM_04015 [Clostridium hylemonae DSM
15053]
gi|225163230|gb|EEG75849.1| hypothetical protein CLOHYLEM_04015 [Clostridium hylemonae DSM
15053]
Length = 875
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 297/612 (48%), Gaps = 81/612 (13%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R LR +
Sbjct: 256 AAGKYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARTLRKYIE 307
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D E + RL+A+ F + E L V D+ ++ K S D TA
Sbjct: 308 QPLIDKEEIERRLDAVEEFKEGAIAREEIREYLSPVYDLERLVCKITYKSA--NPRDLTA 365
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
F S+ L H+ I S LR L D +E S IT A + E I +
Sbjct: 366 FKSSLAMLPHIRCILGDMKSPLLRGLFDSL--DTLEDLCSLITD--AILEEPPIAM---- 417
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
KE G ++REG+ +E+D LR + E+L ++ E + K + I +
Sbjct: 418 --KE---GGIIREGYNEEVDRLRAAKSDGKEWLAKLEEQEREKTG--IKNLR---IRFNK 467
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIY 463
GY LE F+ D + L Y P+ +EL++ +
Sbjct: 468 VFGYY------------LEVTNSFKNLVPDYYTRKQTLANAERYIIPELKELEDTILGAE 515
Query: 464 HKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E + RD ++ + KAV A++D F SLALVA +NNY+RP +
Sbjct: 516 DKLYALEYELYCQVRDAIAAEIVRIQTTAKAV---AQIDVFTSLALVAERNNYVRPKINE 572
Query: 521 EPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVF 577
++DI++GRH + E + D FI NDT + D RI++ITGPN +GKS Y++Q ALIV
Sbjct: 573 RGIIDIKDGRHPVVEKMIPNDMFIANDTFLNDRKNRISVITGPNMAGKSTYMRQTALIVL 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
+S IGSFVPA +A VGL D S + + QS+FM+++ +V +LR AT +SL +L
Sbjct: 633 MSQIGSFVPASSADVGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATGRSLLIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + I + + K L TH EL EG K + + Y +
Sbjct: 693 DEIGRGTSTFDGLSIAWAVIEHISNSRLLGAKTLFATHYHELTELEG---KIDNVNNYCI 749
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+V +DIVFL ++V G A SYG+ A LAGVP VI+RA +
Sbjct: 750 AV------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDTVIERAKEI--------- 794
Query: 748 VERWSHENISAQ 759
VE SH +I+A+
Sbjct: 795 VEELSHADITAR 806
>gi|260587680|ref|ZP_05853593.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|331084031|ref|ZP_08333138.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541945|gb|EEX22514.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|330402393|gb|EGG81963.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
Length = 904
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 185/647 (28%), Positives = 310/647 (47%), Gaps = 95/647 (14%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S +K++ +D++ L++ +T + G S+ +++K T MG R++R++
Sbjct: 284 STDKYMLIDSSTRRNLELTETMREKVKRG--------SLLWVLDKTKTAMGARMMRSFIE 335
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D +N+RL+A+ C E + E L V D+ ++ + + S D +
Sbjct: 336 QPLIDEGEINARLDAVEEINCHEMDREEIREYLSPVYDMERLISRVSYQS--ANPRDLIS 393
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
F SI + ++ ++ E L++ ++ +L +Y+L+ I
Sbjct: 394 FKSSISMIPYIRQLLSQFQCEELQKVYEEMD-------------DLQDLYQLLEASIVDE 440
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G +++EG+ +++D R+ + +V EL + I Y
Sbjct: 441 PPLAMKEGGIIKEGYQEDIDHFRE-----AKTKGKVWLAELEAEEKEKTGIRTLKIKYNK 495
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIY 463
GY LE F+ D + L Y TP+ +EL++++
Sbjct: 496 VFGYY------------LEVTNSFKDMVPDYYTRKQTLTNAERYITPRLKELEDMILGAE 543
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K+ +E + + I + + K A+LD + SLALVA +N ++RP + + +
Sbjct: 544 DKLYALEYEAFVSIRTKIAAEVERIQKTARAIAKLDAYASLALVASRNQFVRPKINTKGV 603
Query: 524 LDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+DI+NGRH + E + D FIPNDT +DN R+ +ITGPN +GKS Y++Q ALIV ++
Sbjct: 604 IDIKNGRHPVVEKMISNDMFIPNDTYLDNGKNRVAVITGPNMAGKSTYMRQSALIVLMAQ 663
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPA+ A +G+ D S + + QS+FM+++ +V +LR ATS+SL +LDE
Sbjct: 664 IGSFVPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEI 723
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTH---LTEL------LNEGCLPKSERL 682
G+GT T DG+ + I + + K L TH LTEL +N C+ ER
Sbjct: 724 GRGTSTFDGLSIAWAVIEHISNTRILGAKTLFATHYHELTELEGKLAGVNNYCIAVKER- 782
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE-- 740
+DIVFL ++V G A SYG+ A LAGVP VI+RA ++E
Sbjct: 783 ----------------GDDIVFLRKIVKGGADKSYGIQVAKLAGVPNSVIERAKELVEEL 826
Query: 741 -AAQNNKHVERWSHENISAQDQQYKNAV-------EKMLAFDVLKGD 779
+A V+ + EN + Q+ K AV E++ FD +K D
Sbjct: 827 VSADITATVKNIASEN---KKQKTKPAVHFDEVDMEQISLFDTVKDD 870
>gi|333897075|ref|YP_004470949.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112340|gb|AEF17277.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 857
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 183/639 (28%), Positives = 312/639 (48%), Gaps = 68/639 (10%)
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S+ D+ E + A L +VL + + +E K+ N + D N F+ LD
Sbjct: 218 SLKDLKLERKKYAIKSLASVLLYLKEMQKVELKQLNNLTYYED-------NSFMLLDNNT 270
Query: 180 HEALQI-FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
L+I + ++ S G ++ ++++ VTPMG RLL+ W P++D+E +N
Sbjct: 271 IRNLEIVYSINRDHSKSG--------TLLSVLDQTVTPMGGRLLKRWLEEPLIDVEKINY 322
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY---TASDWTAFLKSICSL 295
RLN++S + + + LK + D+ + S +Y A D + SI L
Sbjct: 323 RLNSVSELYNDYKGRLDIRDILKGIYDLERL-----SSKLVYQNINAKDLLSIKISIERL 377
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ ++ + S L+E L+ L +++L+ I + S G
Sbjct: 378 PKLKQLLDKYKSNYLKEIFSKLD-------------TLQDIHDLIDKSIKDDPSSNVKEG 424
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
++++GF +DELR+ + ++ + S E + + I Y GY + +
Sbjct: 425 NIIKDGFDKNIDELRRASIDGKSWIANLESYEKEKTG-----IKTLKIGYNKVFGYYIEV 479
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ + ++ A ++ Y TP+ +E++ + K+++ME I
Sbjct: 480 SKSYISSVPENYIRKQTLANAER--------YITPELKEIEEKILGAETKLVEMEYEIFD 531
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQ 534
+ I + + A LD +SLA VA NNY++PI+ + I++GRH V++
Sbjct: 532 RIREQIKNEIYRIQMTSRYIAILDVLVSLATVAETNNYVKPIVNSSDRIVIKDGRHPVIE 591
Query: 535 EMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGL 594
+ D+FI ND ID+ I IITGPN +GKS Y++QVALIV ++ IGSFVPA A +G+
Sbjct: 592 TIMDDSFISNDIEIDDKKPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAEIGV 651
Query: 595 TD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLG 646
D S + + QS+FM+++++V ++L AT SL +LDE G+GT T DG+ +
Sbjct: 652 VDRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTSTYDGMSIAC 711
Query: 647 GTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+ Y + + K + TH EL N K + +K Y +SV TD ++I+FL
Sbjct: 712 AILEY-IHDKIKAKTMFATHYHELTN--LEDKLDGIKNYNISV-----EETD-DEIIFLR 762
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+++PG A SYG+ A LAG+P EVI+ A +L +N+
Sbjct: 763 KIIPGAADKSYGIQVAKLAGLPDEVIQNAKKILNNLENS 801
>gi|354547498|emb|CCE44232.1| hypothetical protein CPAR2_400330 [Candida parapsilosis]
Length = 680
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 185/644 (28%), Positives = 304/644 (47%), Gaps = 67/644 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIF---QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPM 217
+DS+ + + +D + ALQI QT K+ I S+ +N VT
Sbjct: 56 VDSIEVCNFKNLMFVDTDSLYALQIVPDPQTKKNIPKNSIK------SLLDFLNHTVTRE 109
Query: 218 GRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK---FN 274
G LLR+W +P+ L+ + R + F SE + + K + + + +K
Sbjct: 110 GYLLLRDWVRKPLAKLDLIKQRQIIVQCF-SSESFKDNRKQIFKLLSQLKNPFRKIRRLR 168
Query: 275 SPSFIYTASDWTAFLKSICSLLHVNKIFEV-----GISESLREQLRLLNFDIVEKAASCI 329
+ ++ + W + L + + + + K+ + I S+ + L D V
Sbjct: 169 TNELLWNS--WKSLLVFLSNSVQIAKLLRLYFGSLSIETSVDHKFTTLLEDDV------- 219
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
E + E ++ II++ S E+G V G +E+D LR IY +L L+ A + +
Sbjct: 220 -FEFQKLSETILSIIELQSSAEEG-KVRVLGGVDEEIDGLRVIYNDLESILQ--ACTQAL 275
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
H + F VYI Q+G+L+ + + G + + +Y
Sbjct: 276 MSSH--NQSFNT--VYIPQLGFLISV-------DIADHASGAALEWDQVFATPSNAYYKC 324
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
K +ELD GDI+ I D E I + L + + +LK ++ ELDC SLA +
Sbjct: 325 DKVQELDEKYGDIHTLINDREIEIIQGLQEEVLTYEAKILKVIDGLVELDCLCSLAEASA 384
Query: 510 QNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYI 569
N+ P LT L I++GRHVL E +PND + R+ ++TG N+SGKSI++
Sbjct: 385 SPNFNYPTLTNGLELQIKDGRHVLLESLSKVVVPNDAIYEEKERMIVLTGANFSGKSIFL 444
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQA 621
QVAL V L+ IG +PA +A +G+ D + + QS+F ID++Q+ +
Sbjct: 445 SQVALNVVLAQIGCAIPASSAVIGIVDKLLTRISSRESLEKRQSTFAIDINQLSKCINLE 504
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCL---PK 678
T +SL ++DEFGKG+ + D LLGGT+ YF + P+ ++ TH EL + +
Sbjct: 505 TERSLVIIDEFGKGSDSIDSPALLGGTLTYFASRSDCPRCILSTHFLELFRGNLIVDRVR 564
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA--- 735
SER+KF V+ + + DI +LYR+V G S+G+HCA + +P+ +I RA
Sbjct: 565 SERVKFLCTQVVLTDGEAK-AADITYLYRIVAGVCDNSHGIHCAKVCRIPSSIIARAEEI 623
Query: 736 AYVLEAAQN--NKHVERWSHENISAQDQQY---KNAVEKMLAFD 774
A L+A ++ N+ +HE +Q Y ++ V K LA D
Sbjct: 624 ARKLDAGKDLVNEMTLLTAHE-----EQNYSIARDVVMKFLALD 662
>gi|392389931|ref|YP_006426534.1| DNA mismatch repair protein MutS [Ornithobacterium rhinotracheale
DSM 15997]
gi|390521009|gb|AFL96740.1| DNA mismatch repair protein MutS [Ornithobacterium rhinotracheale
DSM 15997]
Length = 863
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 300/616 (48%), Gaps = 66/616 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ + ++ + F+ LD+ L+IF + HP + ++ ++N +TPMG R
Sbjct: 251 INKLQRIANDNFMWLDSFTVRNLEIFNS-PHP---------DSVTLLDILNHTLTPMGTR 300
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W P+ +E + R N + + L E+ L E LK + DI + K +
Sbjct: 301 MLRRWLALPLSKVEPIVLRQNTVDYLLKHPEVSLPLAEELKNMPDIERLCAKIATGKI-- 358
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE-LAYVYEL 339
T T ++ S V I E+ L ++D + A+ + + L ++++
Sbjct: 359 TPKQLTQLTDALAS---VQNIVEI-----------LQDYDPTKLKATTFSWDTLPHLHQQ 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHLCKE 397
+ + + G ++ EG ELDELR I E+LE + + E+ +P L
Sbjct: 405 LTEALTDDPPHFINKGNVIAEGVSQELDELRNILSHGKEYLENMKNREIENTGIPSLK-- 462
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
I + + GY + + D + ++ S+ Y T + ++ +
Sbjct: 463 -----INFNNVFGYFIEVRNTHKDKVPSDWIRKQTLVNSER--------YITEELKQYEE 509
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ KIL +E + ++L++ I L + N A LDC L+ A +A +N Y++P
Sbjct: 510 KILGAEEKILQIETQLFQELIAAIMPLIPKLQENANALARLDCLLNFAHLAQKNYYVKPS 569
Query: 518 LTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVA 573
L+ L I GRH + E + +I N +D+ D +I +ITGPN SGKS ++QVA
Sbjct: 570 LSTNTHLHIDEGRHPVIEQQLPPSSPYISNSVYLDDKDQQIMMITGPNMSGKSALLRQVA 629
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV ++ IGS+VPA AA +G+ D S +++ +S+FM+++++ +L T +S
Sbjct: 630 LIVLMAQIGSYVPAKAADIGIVDRIFTRVGASDNLSMGESTFMVEMNETAQILNNLTPKS 689
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKF 684
L LLDE G+GT T DGI + + PK L TH E LNE + KS +R+K
Sbjct: 690 LILLDEIGRGTSTYDGISIAWSIAEFLHQSKFKPKTLFATHYHE-LNE--MAKSFKRIKN 746
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y +S+ ++ I+FL +L PG + S+G+H A LAG+P V+ RA VL+ +N
Sbjct: 747 YNVSIKETKDT------ILFLRKLQPGGSEHSFGIHVAKLAGMPQAVLNRAKEVLKQLEN 800
Query: 745 NKHVERWSHENISAQD 760
+ +NI+AQ+
Sbjct: 801 AHAGQGEKVKNIAAQE 816
>gi|340515616|gb|EGR45869.1| predicted protein [Trichoderma reesei QM6a]
Length = 798
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 207/748 (27%), Positives = 343/748 (45%), Gaps = 130/748 (17%)
Query: 49 AQPQIIYTSTKSEESFLSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDD 107
AQP I S + E+ L+ + K + +T+ ++L+ SS FS+ A L L G +
Sbjct: 112 AQPTTILMSRRVPEAILTFVEKHVERSTQDLHLRLMPSSDFSHTFACEELSSL---GSNG 168
Query: 108 GLSIK-------ERICYLN----------------------SMMDMGSEVQVRASGGLLA 138
G S + E+ C N S++D+ S + +G LL
Sbjct: 169 GCSFRSASPSNAEQQCMENNGRAMQRSGRDEPQCMKLVRCGSLIDLESVASLSCAGALLT 228
Query: 139 VLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIG 198
L R + + I +V +L + + + +LQI + HP+
Sbjct: 229 ELHRRRSLASSSSSP---GIFDIRTVTMFNLADHVFVSEESLLSLQIINHESHPNSQAWS 285
Query: 199 ------RAKEGFSVFGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
KE S++G+++ TP GR LR+ F
Sbjct: 286 IDSSSSSEKENLSIYGLLHPLASTPQGRAHLRHMF------------------------- 320
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR 311
L+ D+ I+ + ++I LLH N + S +
Sbjct: 321 --------LQPTSDLDIIMDR----------------QRTISLLLHPNNEEK---SRRVG 353
Query: 312 EQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQ 371
LR + +I++ + T + + E V+ D +S+++ Y VR G DELD L++
Sbjct: 354 SVLRKMG-NIIDGINPMVLTRVGDLIEKVVNF-DQAKSQQR-YS--VRPGVDDELDGLKR 408
Query: 372 IYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL--EQLQ 429
Y+ L FL EVA+ LP +C ++ +++ Q+G+L + ++ + E+
Sbjct: 409 QYDGLNSFLTEVANHVAQDLP-VCARQYIRSCIFLPQLGFLTVVEQDHRQSGSSFDEECA 467
Query: 430 G---FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
G ++ +F+D D +Y ELD+ GDIY +I D E + + L + L
Sbjct: 468 GDGLWKKSFTDND----TAYYKNRHMTELDDQYGDIYSQISDREVEVMQRLAMDVILHEK 523
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDT 546
L+ A + E D L+LAL A + + P +T +L I+ GRH LQE+ +F+PND
Sbjct: 524 TLVAAADTCGEFDALLALALGAAKYGWKAPQMTTANILHIKGGRHPLQELLSSSFVPNDC 583
Query: 547 RIDNDGRIN---------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS 597
I +DG + ++TGPN SGKS+YIKQVA+IV+L+H+GSFVPAD A +G D
Sbjct: 584 YIGDDGTVAPGRHHVQALVLTGPNQSGKSVYIKQVAIIVYLAHLGSFVPADYAVIGTVDK 643
Query: 598 --------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ ++ S+F DL V ++ +T++SL ++DEFG GT DG G+ +
Sbjct: 644 ILTRISLWESVSGTGSTFAHDLQDVSHAIKYSTARSLVVIDEFGNGTTANDGAGMFAAML 703
Query: 650 NYFVTCDV-PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE-DIVFLYR 707
++F++ P++L TH E+ G L L M V R + ++ D+E + +L+R
Sbjct: 704 DHFLSSVTGTPRILAATHFHEIFANGYLSHHSTLMLAHMDV-RTDWDAIDLEKKVTYLFR 762
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRA 735
LV G++ S G CA+L+G+P V+ RA
Sbjct: 763 LVEGYSSTSLGSQCAVLSGIPERVLNRA 790
>gi|421837499|ref|ZP_16271662.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001627]
gi|409740345|gb|EKN40647.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001627]
Length = 932
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 296/608 (48%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
+ + CS +G ++E L D+ CI T L +++L
Sbjct: 359 ----NAKELISLKCS---------IGKVPYIKEYLSNFKSDLFLNMEQCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + ++ I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|392960659|ref|ZP_10326125.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|421054583|ref|ZP_15517550.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|421057355|ref|ZP_15520199.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
gi|421065506|ref|ZP_15527247.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|421071446|ref|ZP_15532564.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392440685|gb|EIW18354.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|392447073|gb|EIW24336.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392454795|gb|EIW31614.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|392458760|gb|EIW35254.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|392463263|gb|EIW39233.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
Length = 864
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 176/600 (29%), Positives = 305/600 (50%), Gaps = 57/600 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ +I + ++L +D+T+ L++ + + G K+ ++ +++ T MG R
Sbjct: 251 INRLINYNAFEYLTIDSTSMRNLEVTRNVRD------GGKKD--TLLYVLDYTKTAMGGR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+++ ++ R ++I+ L L ++HETL + D+ IL + +
Sbjct: 303 LLKKWLEYPLMNTTHIIQRQDSIAELLEKPTLRQTIHETLANIYDLERILTRIEVGT--A 360
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+A D A S+ L +++EQL+ N + + T + V +
Sbjct: 361 SARDLIALKSSLMVL------------PTIKEQLQKTNTVFLSNLHFYLHTHVDLVTLVD 408
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I+D N G L++ G+ ELDEL I + +F++++ + E K + V
Sbjct: 409 TAIVD-NPPFSVREGGLIKRGYDLELDELHTIARDSKQFVQDIETRERENTG--IKSLKV 465
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + + L ++ A ++ Y TP+ +E ++ +
Sbjct: 466 G---YNKVFGYYIEVTHSHTASVPLSYVRKQTLANAER--------YITPELKEFESKIL 514
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI+ +E + + HI ++ + + A+LD +SL+ VA ++NY+RP +T
Sbjct: 515 GAQEKIVTIEYHLFSKIRDHIKVYIKEIQETARQLAQLDAIISLSEVAFRHNYIRPTITQ 574
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ I++GRH + E + + F+PND+ +++ I IITGPN +GKS Y++QVAL+V
Sbjct: 575 TREITIKDGRHPIVERLLKRELFVPNDSELNHHSNEIMIITGPNMAGKSTYMRQVALLVL 634
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSF+PA A + D S ++ QS+FM+++++V +L+ ATSQSL +L
Sbjct: 635 MAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQSTFMVEMNEVAQILKHATSQSLIIL 694
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ + I Y + V K L TH EL K+ +K Y+++V
Sbjct: 695 DEIGRGTSTFDGMSIARAVIEY-IKERVKAKTLFATHYHELTELADYHKT--VKNYSVAV 751
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
E S D+VFL R++PG A SYG+H A LAG+P +VIKRA +L + N HV+
Sbjct: 752 --KERGS----DVVFLRRIIPGGADKSYGIHVAQLAGLPQKVIKRAQELLVELEQN-HVQ 804
>gi|148379759|ref|YP_001254300.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
3502]
gi|153930881|ref|YP_001384057.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
19397]
gi|189030760|sp|A7FUL0.1|MUTS_CLOB1 RecName: Full=DNA mismatch repair protein MutS
gi|229486458|sp|A5I2S2.1|MUTS_CLOBH RecName: Full=DNA mismatch repair protein MutS
gi|148289243|emb|CAL83339.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC
3502]
gi|152926925|gb|ABS32425.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
19397]
Length = 932
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 295/608 (48%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ ++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWALDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
+ + CS +G ++E L D+ CI T L +++L
Sbjct: 359 ----NAKELISLKCS---------IGKVPYIKEYLSNFKSDLFLNMEQCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + ++ I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|197301744|ref|ZP_03166814.1| hypothetical protein RUMLAC_00470 [Ruminococcus lactaris ATCC
29176]
gi|197299184|gb|EDY33714.1| DNA mismatch repair protein MutS [Ruminococcus lactaris ATCC 29176]
Length = 877
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 305/637 (47%), Gaps = 80/637 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ LD++ L++ +T + G S+ +++K T MG R LR + +P+
Sbjct: 259 KYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTRTAMGARTLRKFVEQPL 310
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+D +N RL+A+ + E L V D+ ++ K S D TAF
Sbjct: 311 IDKNEINRRLDAVEELKEQAISREEIREYLSPVYDLERLITKITYGSA--NPRDLTAFKS 368
Query: 291 SICSLLHVNKIFE---VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
S+ L + I E V + + + E L D +E +T A E I + +
Sbjct: 369 SLEMLPPIRYILEEMKVPLLQEIYEDL-----DALEDLCDLVTK--AIREEPPIAMKE-- 419
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVY 405
G ++REG+ +E+D+LR+ + ++L E E + +L I Y
Sbjct: 420 -------GNIIREGYNEEVDKLRRAKSDGKDWLAKLEEDEREKTGIKNLK-------IKY 465
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + + L + +R Y TP+ +EL++++ K
Sbjct: 466 NKVFGYYLEVT------NSYKDLVPDYYTRKQTLANAER--YITPELKELEDMILGAEDK 517
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
+ +E + ++ I + + K A LD F SLALVA +N+Y+RP + + ++D
Sbjct: 518 LYALEYELYSEVRETIAAQVERIQKTAKAVAGLDVFTSLALVAERNHYVRPKINEKGIID 577
Query: 526 IQNGRHVLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I+ GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q ALI ++ +G
Sbjct: 578 IKEGRHPVVEKMIPNDMFISNDTYLDDKKNRISIITGPNMAGKSTYMRQTALIALMAQVG 637
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
FVPA +A +GL+D S + + QS+FM+++ +V +LR ATS+SL +LDE G+
Sbjct: 638 CFVPAQSANIGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGR 697
Query: 635 GTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
GT T DG+ + + Y + K L TH EL EG K E + Y ++V
Sbjct: 698 GTSTFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEG---KIENVNNYCIAV--- 751
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWS 752
+DIVFL ++V G A SYG+ A LAGVP VI RA ++E + R S
Sbjct: 752 ---KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDLVINRAKEIVEELSDEDITSRVS 808
Query: 753 HENISAQDQQYKNA----------VEKMLAFDVLKGD 779
I+A++ K + +M FD +K D
Sbjct: 809 E--IAAREHTAKKKGRSKKYDEVDIAQMSLFDTVKDD 843
>gi|337737054|ref|YP_004636501.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
gi|384458562|ref|YP_005670982.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|325509251|gb|ADZ20887.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336293249|gb|AEI34383.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
Length = 869
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 294/600 (49%), Gaps = 59/600 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID + + + FL +D + L++ +T K S G S+ +++K T MG R
Sbjct: 248 IDELQKYEIVDFLSIDINSRRNLELTETLKDKSKKG--------SLLWVLDKTSTAMGGR 299
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+R W RP++D E +N RL+A+ L + L E LK V DI + K +S S
Sbjct: 300 QIRKWIERPLIDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSV-- 357
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A + + SI L + K+ + SE L L+ +L +Y+L+
Sbjct: 358 NAKEMISLRGSIEKLPAIKKLIKNFNSELLVNMENALD-------------DLGDIYKLL 404
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMF 399
I+ N S G +++EG+ ++DELR ++ +ASLE + K +
Sbjct: 405 YESINDNPSLSIKEGNIIKEGYNKDIDELRLAKSHGKQW---IASLENTEREVTGIKSLK 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
V Y GY + I + L+ E + T Y TP+ +E++ +
Sbjct: 462 VS---YNKVFGYYIEITKSNLNLVP-------EGRYIRKQTLTNSERYITPELKEMEEKI 511
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++ +E + ++ I D + + +ELDC S A VA +NNY +P++
Sbjct: 512 LGAEEKLVLLEYNVFCEIRERIEKEIDRIKGSAKILSELDCICSFADVARENNYCKPVIK 571
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIV 576
+ L I+ GRH + E + + F+ NDT I+N D + +ITGPN +GKS Y++QV LIV
Sbjct: 572 RDGTLVIKEGRHPVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIV 631
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IG FVPA AA + + D S + A +S+FM+++ +V +L+ AT SL L
Sbjct: 632 LMAQIGCFVPASAAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSNILKNATKNSLIL 691
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLN-EGCLPKSERLKFYT 686
LDE G+GT T DG+ + I Y ++ K L TH EL EG + E LK Y+
Sbjct: 692 LDEVGRGTSTYDGLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGEI---EGLKNYS 748
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
++V + +DI+FL +++ A SYG+ A +AG+P EV+ RA +L+ + K
Sbjct: 749 IAVKKVN------DDIIFLRKIISKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAK 802
>gi|298706327|emb|CBJ29342.1| MutS protein homolog 5 [Ectocarpus siliculosus]
Length = 644
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 324/656 (49%), Gaps = 74/656 (11%)
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S + +G + QVRA G LL L++ V LE + S+ + +V ++ + ++++D+ A
Sbjct: 10 SFIAIGRDHQVRALGALLIHLQS--TVFALE----ASGSVGVTAVRQLDSSGYMRIDSMA 63
Query: 180 HEALQIFQTDKHP--SHMGIG----RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
L P H G R K +F + + + GRR L+ W L+P+ D+
Sbjct: 64 LRRLFRCSWGIRPLIPHGFEGAWESRRKSSILMFSVA-RTKSASGRRCLKEWMLKPLHDI 122
Query: 234 ENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
++ R + + + +E E+ L L + I+ + +T +DW + S
Sbjct: 123 AAISVRQDGVEVLMQAENAEICRRLRSQLSKSYGMTRIIMRIKK--VAWTFADWCKLITS 180
Query: 292 ICSLLHVN---KIFEVGISESLREQLRLLNFDIVEKAASCI-TTELAYVYELVIGIID-V 346
I S L V + ++ R N + + I L E + +ID V
Sbjct: 181 IESALDVRDGLALMRTSAGAAVTVGGRFGNESFLARLLDDIDPVVLRKCLEGLCTVIDPV 240
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+++K ++R GF +ELD +R+ E+LP+ L+++ + L + + +E+ V Y+
Sbjct: 241 ASAQDKD--VVIRPGFDEELDNMRERLEDLPDILQQIGQIVLNE-NSVLEELSVE---YV 294
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
QIG+ + E+ D + F FAF+ GET ++Y +P R++D+ +GDI I
Sbjct: 295 PQIGFFTTL-HERFGDLAPDD---FTFAFAQ--GET--VYYKSPTMRDVDDRIGDIQALI 346
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
D + I R+L + L A + AELD L+LA VA ++RP + + ++ I
Sbjct: 347 TDKQAKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMI 406
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+NGRH LQEM VD FIPNDT I + R+ +ITG N SGKS+Y+KQV + V+L+H+GSFVP
Sbjct: 407 KNGRHPLQEMAVDLFIPNDTFIADGSRVALITGANCSGKSVYLKQVGVAVYLAHVGSFVP 466
Query: 587 ADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A+ A +GLTD ++ T E QSSF ID++QV M R +T +SL L+DEFGKGT
Sbjct: 467 AEKAVIGLTDRIFTRIATVETSSLPQSSFTIDVNQVAQMARTSTPRSLLLIDEFGKGTAP 526
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYT----MSVLR--- 691
DGIGL+ + + K L H E+ + + S + +T +SV R
Sbjct: 527 ADGIGLVAALLRHLSRKGR--KCLFTLHFHEIFSHDLVKVSGPDELHTDLKDVSVFRMDV 584
Query: 692 --------PENNSTDVEDIVF-------------LYRLVPGHALLSYGLHCALLAG 726
PE+ + + L++L PG S+G+ CA +AG
Sbjct: 585 HVPSPPKAPESQGDGLGEGEGTTGEEWAFVPPTPLFKLKPGMTSNSHGIACAQVAG 640
>gi|383761504|ref|YP_005440486.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381772|dbj|BAL98588.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 874
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 293/594 (49%), Gaps = 75/594 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+L+ F+ LD L++ +T + G S+ G++N +TPMG RLLR W
Sbjct: 265 TLDAFMTLDEATRRNLELTETMRSGEVEG--------SLLGVLNATLTPMGSRLLRRWIN 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P+LD+ +N RL+A+ F+ L L L+ D+ WT
Sbjct: 317 QPLLDVAAINRRLDAVQRFVDDTLLRLDLRALLQNFGDL----------------ERWTN 360
Query: 288 FLKSICSLLHVNKIFEVGISESLR----EQLRLLNFDIVEKAASCITTELAYVYELVI-- 341
+ +L VGI E+LR RL N+ + + TT+ +++
Sbjct: 361 RVMQGIALPR----DLVGIREALRLAPKVAERLGNWQRAHEDSG--TTDFPLCADILALL 414
Query: 342 --GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
++D + G L+R GF ELD L + E+ +A LE V+ L +
Sbjct: 415 ESALVDDPPANLSTPG-LIRPGFDAELDSLVERSRHAREW---IAGLEQVERERLGIKNL 470
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + + +LD ++ A +GE Y TP+ +E + L+
Sbjct: 471 --KVGYNKVFGYYIEVTKSQLDRVPNSYIRKQTIA----NGER----YITPELKEYETLV 520
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + L++E+ + ++ + + LL + AE+D F +LA VA Y+RP +
Sbjct: 521 LNADERRLEIEQRLFGEICAQVAAQGTRLLHLAHLLAEIDVFAALAEVALTRRYVRPEVD 580
Query: 520 LEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
P ++I GRH + EMT+ + F+PNDT + + I IITGPN SGKS Y++Q ALI
Sbjct: 581 EGPCIEIVAGRHPVVEMTLTDEPFVPNDTLLTPETAIQIITGPNMSGKSTYLRQTALITL 640
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVPA+ A +G+ D S + QS+FM+++ + +L AT +SL LL
Sbjct: 641 MAQIGSFVPAERARIGVVDRIFTRLGASDEIHRGQSTFMVEMVETANILHHATPRSLLLL 700
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKF---Y 685
DE G+GT T DG+ + I Y + K L TH EL + +ERL Y
Sbjct: 701 DEIGRGTSTYDGLAIAWAVIEYIHNHPRLRAKTLFATHYHELTD-----LAERLPHVVNY 755
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++V ++S D ED+VFL R++PG A SYG+H A +AG+PA+V+ RA +L
Sbjct: 756 NVAV----DDSGDGEDVVFLRRIIPGKADRSYGVHVARMAGLPAQVVARAEEIL 805
>gi|15895112|ref|NP_348461.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum ATCC
824]
gi|44888237|sp|Q97I19.1|MUTS_CLOAB RecName: Full=DNA mismatch repair protein MutS
gi|15024812|gb|AAK79801.1|AE007692_9 Mismatch repair protein MutS, ATPase [Clostridium acetobutylicum
ATCC 824]
Length = 869
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 294/600 (49%), Gaps = 59/600 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID + + + FL +D + L++ +T K S G S+ +++K T MG R
Sbjct: 248 IDELQKYEIVDFLSIDINSRRNLELTETLKDKSKKG--------SLLWVLDKTSTAMGGR 299
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+R W RP++D E +N RL+A+ L + L E LK V DI + K +S S
Sbjct: 300 QIRKWIERPLIDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSV-- 357
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A + + SI L + K+ + SE L L+ +L +Y+L+
Sbjct: 358 NAKEMISLRGSIEKLPAIKKLIKNFNSELLVNMENALD-------------DLGDIYKLL 404
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMF 399
I+ N S G +++EG+ ++DELR ++ +ASLE + K +
Sbjct: 405 YESINDNPSLSIKEGNIIKEGYNKDIDELRLAKSHGKQW---IASLENTEREVTGIKSLK 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
V Y GY + I + L+ E + T Y TP+ +E++ +
Sbjct: 462 VS---YNKVFGYYIEITKSNLNLVP-------EGRYIRKQTLTNSERYITPELKEMEEKI 511
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++ +E + ++ I D + + +ELDC S A VA +NNY +P++
Sbjct: 512 LGAEEKLVLLEYNVFCEIRERIEKEIDRIKGSAKILSELDCICSFADVARENNYCKPVIK 571
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIV 576
+ L I+ GRH + E + + F+ NDT I+N D + +ITGPN +GKS Y++QV LIV
Sbjct: 572 RDGTLVIKEGRHPVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIV 631
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IG FVPA AA + + D S + A +S+FM+++ +V +L+ AT SL L
Sbjct: 632 LMAQIGCFVPASAAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSHILKNATKNSLIL 691
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLN-EGCLPKSERLKFYT 686
LDE G+GT T DG+ + I Y ++ K L TH EL EG + E LK Y+
Sbjct: 692 LDEVGRGTSTYDGLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGEI---EGLKNYS 748
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
++V + + DI+FL +++ A SYG+ A +AG+P EV+ RA +L+ + K
Sbjct: 749 IAVKKVND------DIIFLRKIISKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAK 802
>gi|350296741|gb|EGZ77718.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 506
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 240/456 (52%), Gaps = 44/456 (9%)
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL 420
G + LDEL+ + ++ + L +V L Q+P + C + ++G+L+ + L
Sbjct: 22 GASERLDELKDDFTQVYQILSDVKREILTQIPKWAVQYVQECTT-VPRLGFLIVV---AL 77
Query: 421 DDTTLE-QLQGFEFA---FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
+ T E G A + + + +R +Y ELD++ GD+ +I D E + +
Sbjct: 78 NPETGEGAFNGTGLADDEWHQVVKDEQRAYYKNRTMVELDDMYGDLTEEIADEEIEVIVE 137
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L + D L++A+ ELD L+LA A + N+ P +T E ++DI+ GRH LQE+
Sbjct: 138 LAGAVSEHEDALIRALELLGELDSLLALAFAAEKYNWAPPKMTSENIIDIEGGRHPLQEL 197
Query: 537 TVDTFIPNDTRI------DNDGRIN--------------IITGPNYSGKSIYIKQVALIV 576
V +FIPND + +N I+ ++TGPN SGKSIY+KQVALI+
Sbjct: 198 LVPSFIPNDCILRGGCTSENGNEIDFVGVKDEPKEPSALVLTGPNNSGKSIYMKQVALII 257
Query: 577 FLSHIGSFVPADAATVGLTD------SKHMTA--EQSSFMIDLHQVGMMLRQATSQSLCL 628
+L+HIGS+VP AT+G+TD + TA ++S+FM DL Q + AT +SL L
Sbjct: 258 YLAHIGSYVPVTRATIGVTDRIFTRVATRETAMDDESAFMTDLKQAAFSINFATRRSLIL 317
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTM 687
DEFGKGT E G + +++F+ D P++LV TH ++ N G L E + + M
Sbjct: 318 ADEFGKGTTMEAGAAVFTAYLHHFLELDADRPRMLVSTHFHDVFNRGFLKPEEGVAYAHM 377
Query: 688 SV-LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
V L PE + E I +LYRLV G A S GL CA + + +V+KRA +L + ++
Sbjct: 378 EVRLNPEAEEGE-EYITYLYRLVHGRAEHSLGLMCAAINHIEDDVLKRAGDILGMLERDE 436
Query: 747 HVE----RWSHENISAQDQQYKNAVEKMLAFDVLKG 778
+E SHE+I A + + + LA D+ +G
Sbjct: 437 DIEAVFASPSHEDIEAL-KAAELVARRFLATDIPQG 471
>gi|168207459|ref|ZP_02633464.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
gi|170661161|gb|EDT13844.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
Length = 909
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYYNNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|168180373|ref|ZP_02615037.1| DNA mismatch repair protein MutS [Clostridium botulinum NCTC 2916]
gi|226949041|ref|YP_002804132.1| DNA mismatch repair protein MutS [Clostridium botulinum A2 str.
Kyoto]
gi|254766622|sp|C1FNT9.1|MUTS_CLOBJ RecName: Full=DNA mismatch repair protein MutS
gi|182668882|gb|EDT80860.1| DNA mismatch repair protein MutS [Clostridium botulinum NCTC 2916]
gi|226844101|gb|ACO86767.1| DNA mismatch repair protein MutS [Clostridium botulinum A2 str.
Kyoto]
Length = 932
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 298/608 (49%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ K G L LN + CI T L +++L
Sbjct: 359 -NAKELISLKCSIGKVPYIKKYLS-GFKSDL-----FLNME------QCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + ++ I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|293115594|ref|ZP_05792223.2| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292808993|gb|EFF68198.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 900
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 318/641 (49%), Gaps = 88/641 (13%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ +D++ L++ +T + G S+ +++K T MG RLLRN +P+
Sbjct: 282 RYMIIDSSTRRNLELVETMREKQKKG--------SLLWVLDKTKTAMGARLLRNMIEQPL 333
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L +++ +R A++ F+ + A L E L V D+ ++ + ++ S + D AF
Sbjct: 334 LIKDDIVARQKAVTEFINNYVDCAELREYLNPVYDLERLVGRISTKS--ASPRDLIAFKG 391
Query: 291 SICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
SI L + K+ F+ + +S+ E+L D++E S I E + V E I I D
Sbjct: 392 SIAMLPPIKKLLASFKSSLIKSIYEEL-----DVLEDICSLI--EASIVDEPPIAIKD-- 442
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVY 405
G L++EG+ +E+D LR + ++L E + E + +L I Y
Sbjct: 443 -------GGLIKEGYNEEIDRLRHAKTDGKQWLLNLEASEKERTGIKNLK-------IKY 488
Query: 406 IHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
GY + F+ + D + + Q T + T K +EL+ ++
Sbjct: 489 NKVFGYYFEVTNSFKNMVPDDYIRK-QTL----------TNAERFTTLKLKELEEVILSA 537
Query: 463 YHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K+ +E + RD ++ L KAV A+ D F +LA+VA QNNY+ P +
Sbjct: 538 EDKLFSLEYDLFTEVRDRIAGEVLRIQTTAKAV---AKADVFSNLAIVAMQNNYVCPTIN 594
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIV 576
+ L++I+ GRH + E + F+ NDT +DN RI+IITGPN +GKS Y++Q ALIV
Sbjct: 595 EKGLIEIEGGRHPVVEKMISNGLFVENDTILDNHKNRISIITGPNMAGKSTYMRQTALIV 654
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGS++PA A +G+ D S + + QS+FM+++ +V +LR ATS SL +
Sbjct: 655 LMAQIGSYIPATKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSDSLLI 714
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYT 686
LDE G+GT T DG+ + + + + K L TH EL EG + E + Y
Sbjct: 715 LDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGQM---ESVNNYC 771
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-EAAQNN 745
++V +DI+FL ++V G A SYG+ A LAGVP+ VI+RA ++ E A N+
Sbjct: 772 IAV------KEQGDDIIFLRKIVKGGADKSYGIQVAKLAGVPSSVIERAKEIVAELADND 825
Query: 746 -----KHVERW--SHENISAQDQQYKNAVEKMLAFDVLKGD 779
K + R S E + D K+ +M FD + D
Sbjct: 826 ISAKAKEIARLGISKEALKIPDSVGKDKYVQMSLFDAVNND 866
>gi|160880513|ref|YP_001559481.1| DNA mismatch repair protein MutS [Clostridium phytofermentans ISDg]
gi|189030711|sp|A9KL10.1|MUTS_CLOPH RecName: Full=DNA mismatch repair protein MutS
gi|160429179|gb|ABX42742.1| DNA mismatch repair protein MutS [Clostridium phytofermentans ISDg]
Length = 932
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 180/642 (28%), Positives = 310/642 (48%), Gaps = 74/642 (11%)
Query: 128 VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQ 187
V V A+G +L L N + N+ + + ++++ +D+++ L++ +
Sbjct: 232 VGVNAAGAILKYLYNTQ----------KNSLSHLTHITPYVTSRYMVIDSSSRRNLELTE 281
Query: 188 TDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL 247
T + G S+ +++K T MG R+LR++ +P++ ++ +++R +AIS
Sbjct: 282 TLREKQKRG--------SLLWVLDKTKTAMGARMLRSFVEQPLITMDEISARYDAISELN 333
Query: 248 CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF---EV 304
+ + E L Y+ D+ ++ K + S D AF S+ L H+ + E
Sbjct: 334 DNVITREEIREYLNYIYDLERLMGKISYKSA--NPRDLIAFASSLSMLPHIKYLLSTCES 391
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
+ + + E++ D ++ + I +A E IGI + G +++EGF
Sbjct: 392 ALLKQIHEEM-----DALDDLQNLIDRSIAE--EPPIGIKE---------GGIIKEGFHT 435
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
E+D LR+ E +L E+ + E Q K + V Y GY + + +
Sbjct: 436 EVDTLRKAKTEGKVWLAELEAKEKEQTG--IKNLKVK---YNRVFGYYLEVTNSYANLVP 490
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
++ + ++ Y TP+ +EL++ + + ++ +E + ++ I
Sbjct: 491 ENWIRKQTLSNAER--------YTTPELKELEDKILNAEDRLFSLEYDLFAEIRDQIAEE 542
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFI 542
+ K A +D F SLA VA +N ++RP L +DI+ GRH + E + D F+
Sbjct: 543 VKRIQKTAKAVANIDAFASLAYVAERNQFIRPELNTNGTIDIKEGRHPVVEQMIPNDMFV 602
Query: 543 PNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
NDT +DN + RI+IITGPN +GKS Y++Q ALIV ++ +GSFVPA A +G+ D
Sbjct: 603 SNDTYLDNAEKRISIITGPNMAGKSTYMRQTALIVLMAQVGSFVPASYANIGIVDRIFTR 662
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S + + QS+FM+++ +V +LR AT SL +LDE G+GT T DG+ + I +
Sbjct: 663 VGASDDLASGQSTFMVEMTEVANILRNATKNSLLILDEIGRGTSTFDGLSIAWAVIEHIS 722
Query: 654 -TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
T + K L TH EL EG K + Y ++V EDIVFL +++ G
Sbjct: 723 NTSMLGAKTLFATHYHELTELEG---KISGVNNYCIAV------KEQGEDIVFLRKIIGG 773
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
A SYG+ A LAGVP V+ RA +++ N E+ H
Sbjct: 774 GADKSYGIQVAKLAGVPNSVLVRAREIVDQLSENDIAEKARH 815
>gi|153940053|ref|YP_001391055.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
Langeland]
gi|384462088|ref|YP_005674683.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
230613]
gi|189030763|sp|A7GE45.1|MUTS_CLOBL RecName: Full=DNA mismatch repair protein MutS
gi|152935949|gb|ABS41447.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
Langeland]
gi|295319105|gb|ADF99482.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
230613]
Length = 932
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 298/608 (49%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ K G L LN + CI T L +++L
Sbjct: 359 -NAKELISLKCSIGKVPYIKKYLS-GFKSDL-----FLNME------QCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + ++ I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|168218088|ref|ZP_02643713.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
gi|182379897|gb|EDT77376.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
Length = 910
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L + L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLNDYYNNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|336464642|gb|EGO52882.1| hypothetical protein NEUTE1DRAFT_72957, partial [Neurospora
tetrasperma FGSC 2508]
Length = 505
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 231/436 (52%), Gaps = 43/436 (9%)
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL 420
G + LDEL+ + ++ L +V L Q+P + C + + ++G+L+ + L
Sbjct: 22 GASERLDELKDDFTQVYHILSDVKREILTQIPKWAVQYVQECTI-VPRLGFLIVV---AL 77
Query: 421 DDTTLE-QLQGFEFA---FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
+ T E G A + + + +R +Y ELD++ GD+ +I D E + +
Sbjct: 78 NPETGEGAFNGTGLADDEWHQVVKDEQRAYYKNRTMVELDDMYGDLTEEIADEEVEVIVE 137
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L + D L++A+ ELD L+LA A + N+ P +T E ++DI+ GRH LQE+
Sbjct: 138 LAGAVSEHEDALIRALELLGELDSLLALAFAAEKYNWAPPKMTSENIIDIEGGRHPLQEL 197
Query: 537 TVDTFIPNDTRI------DNDGRIN--------------IITGPNYSGKSIYIKQVALIV 576
V +FIPND + +N I+ ++TGPN SGKSIY+KQVALI+
Sbjct: 198 LVPSFIPNDCILRGGCASENGNEIDFVGVRDEPKEPSALVLTGPNNSGKSIYMKQVALII 257
Query: 577 FLSHIGSFVPADAATVGLTD------SKHMTA--EQSSFMIDLHQVGMMLRQATSQSLCL 628
+L+HIGS+VP AT+G+TD + TA ++S+FM DL Q + AT +SL L
Sbjct: 258 YLAHIGSYVPVTRATIGVTDRIFTRVATRETAMDDESAFMTDLKQAAFSINFATRRSLIL 317
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTM 687
DEFGKGT E G + +++F+ D P++LV TH ++ N G L E + + M
Sbjct: 318 ADEFGKGTTMEAGAAVFTAYLHHFLELDADRPRMLVSTHFHDVFNRGFLKPEEGVAYAHM 377
Query: 688 SV-LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
V L PE + E I +LYRLV G A S GL CA + + +V+KRA +L + ++
Sbjct: 378 EVRLNPEAEERE-EHITYLYRLVHGRAEHSLGLMCAAINHIEDDVLKRAGDILGMLERDE 436
Query: 747 HVE----RWSHENISA 758
+E SHE+I A
Sbjct: 437 DIEAVFASPSHEDIEA 452
>gi|154504380|ref|ZP_02041118.1| hypothetical protein RUMGNA_01884 [Ruminococcus gnavus ATCC 29149]
gi|153795309|gb|EDN77729.1| DNA mismatch repair protein MutS [Ruminococcus gnavus ATCC 29149]
Length = 895
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 300/612 (49%), Gaps = 84/612 (13%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R+LR +
Sbjct: 274 TTGKYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARMLRKYVE 325
Query: 228 RPILDLENLNSRLNAISFF----LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P+++ + + RL+A+ +C EE+ E L V D+ ++ K S
Sbjct: 326 QPLIEKKEILRRLDAVEELKEQAICREEI----REYLSPVYDLERLVTKITYGSA--NPR 379
Query: 284 DWTAFLKSICSLLHVNKIFE---VGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D TAF S+ L + I E + E ++E+L D +E ++ I +A L
Sbjct: 380 DLTAFGSSLTMLPPICCIMEDLRAPLLEEIKEEL-----DPLEDISALIKEAIAEEPPLA 434
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEM 398
+ KE G ++R+G+ +E+D LR+ E ++L ++ S E + +L
Sbjct: 435 M--------KE---GGIIRDGYSEEVDTLRRAKSEGKDWLAKLESEEREKTGIKNLK--- 480
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRE 454
I Y GY LE F+ D + L Y P+ +E
Sbjct: 481 ----IKYNKVFGYY------------LEVTNSFKDMVPDYYTRKQTLANAERYIIPELKE 524
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
L++ + K+ +E I D+ + I + + A++D F SLALVA ++NY+
Sbjct: 525 LEDTILGAEDKLYALEYEIYCDVRNQIAAQVERIQTTAKAIAKVDVFASLALVAERSNYV 584
Query: 515 RPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQ 571
RP + + ++DI++GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q
Sbjct: 585 RPKINEQGVIDIKDGRHPVVEKMIPNDMFISNDTYLDDKKQRISIITGPNMAGKSTYMRQ 644
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
ALIV ++ +GSFVPA +A +GL D S + + QS+FM+++ +V +LR ATS
Sbjct: 645 AALIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATS 704
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSER 681
+SL +LDE G+GT T DG+ + + Y + K L TH EL EG K
Sbjct: 705 KSLLILDEIGRGTSTFDGLSIAWAVVEYISDNKLLGAKTLFATHYHELTELEG---KIHN 761
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+ Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA ++E
Sbjct: 762 VNNYCIAV------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDVVITRAKEIVEE 815
Query: 742 AQNNKHVERWSH 753
+ R S
Sbjct: 816 LSDEDITTRVSE 827
>gi|255280936|ref|ZP_05345491.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
14469]
gi|255268384|gb|EET61589.1| DNA mismatch repair protein MutS [Marvinbryantia formatexigens DSM
14469]
Length = 875
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 294/601 (48%), Gaps = 94/601 (15%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ LD++ L++ +T + G S+ +++K T MG R+LR++ +P+
Sbjct: 259 KYMVLDSSTRRNLELCETLREKQRKG--------SLLWVLDKTKTAMGARMLRSFIEQPL 310
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+D++ + R A++ + + E L V D+ ++ K + + D AF
Sbjct: 311 IDIDEIELRQQAVAELKSNAIAREEIREYLNPVYDLERLISKISYQT--ANPRDLVAFKS 368
Query: 291 SICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
S+ L H+ I F+ + ++RE + D++E C E + + + I I +
Sbjct: 369 SLSMLPHIKYIMGDFKSALLCNIRE-----DIDVLEDL--CTLVEQSIIEDPPISIRE-- 419
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+R+GF +E+D LRQ E +L ++ + E + K M V Y
Sbjct: 420 -------GNLIRDGFHEEVDRLRQAKTEGKTWLADLEAKEREKTG--IKNMKVK---YNR 467
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIY 463
GY LE ++ D + L Y TP+ +EL++++
Sbjct: 468 VFGYY------------LEVTNSYKDMVPDYYTRKQTLANAERYITPELKELEDVILGAE 515
Query: 464 HKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+++ +E + RD ++ L KAV A +D F SLALVA QNNY+ P +
Sbjct: 516 DRLVSLEYELFCEVRDKIASEILRIQKTAKAV---AGIDVFASLALVAEQNNYVCPKMNS 572
Query: 521 EPLLDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
L+ I++GRH + E + D FI NDT +DN RI+IITGPN +GKS Y++Q ALIV
Sbjct: 573 RGLIQIRDGRHPVVEKMIKNDMFIANDTLLDNHKNRISIITGPNMAGKSTYMRQTALIVL 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVPA A +G+ D S + + QS+FM+++ +V +LR ATS SL +L
Sbjct: 633 MAQIGSFVPASEAKIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSDSLLIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTH---LTEL------LNEGCLPKS 679
DE G+GT T DG+ + + + + K L TH LTEL +N C+
Sbjct: 693 DEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGKLSSVNNYCIAVR 752
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
ER +DIVFL ++V G A SYG+ A LAGVP +I+RA ++
Sbjct: 753 ER-----------------GDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSIIERAKELV 795
Query: 740 E 740
+
Sbjct: 796 Q 796
>gi|168184856|ref|ZP_02619520.1| DNA mismatch repair protein MutS [Clostridium botulinum Bf]
gi|237795209|ref|YP_002862761.1| DNA mismatch repair protein MutS [Clostridium botulinum Ba4 str.
657]
gi|259511163|sp|C3KX35.1|MUTS_CLOB6 RecName: Full=DNA mismatch repair protein MutS
gi|182672081|gb|EDT84042.1| DNA mismatch repair protein MutS [Clostridium botulinum Bf]
gi|229263070|gb|ACQ54103.1| DNA mismatch repair protein MutS [Clostridium botulinum Ba4 str.
657]
Length = 932
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 298/608 (49%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ K S + L LN + CI T L +++L
Sbjct: 359 -NAKELISLKCSIGKVPYIKKYLS-----SFKSDL-FLNME------KCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + + I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|225378113|ref|ZP_03755334.1| hypothetical protein ROSEINA2194_03773 [Roseburia inulinivorans DSM
16841]
gi|225210114|gb|EEG92468.1| hypothetical protein ROSEINA2194_03773 [Roseburia inulinivorans DSM
16841]
Length = 822
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 300/606 (49%), Gaps = 74/606 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ S KF+ +D++ L++ +T + G S+ +++K T MG R
Sbjct: 249 ISAIHPYSTGKFMIIDSSTRRNLELVETMREKQKRG--------SLLWVLDKTKTAMGAR 300
Query: 221 LLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR++ +P++D + R +AI+ + EEL E L + D+ ++ +
Sbjct: 301 LLRSYVEQPLIDKAEIEKRQDAIADINRHMITREEL----REYLNPIYDLERLITRVTYM 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
S D AF SI L + + E +E L+E I T++ +
Sbjct: 357 SA--NPRDLIAFKNSIGMLPPIKTLLEDFDTELLKE----------------IQTDMDSL 398
Query: 337 YELVIGIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
EL +ID + +E G L+++G+ + +D+ R E +L E+ + E +
Sbjct: 399 EELY-QLIDASIMEEPPISVREGGLIKDGYNENVDKYRHAKTEGKTWLAELEAKEREKTG 457
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
K + I + GY + + D L F +R Y TP+
Sbjct: 458 --IKNL---KIKFNKVFGYYLEVTNSYRD------LVPDYFTRKQTLANAER--YITPEL 504
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+EL++++ K++++E + ++ + I + K A+LD F+SLA+VA QNN
Sbjct: 505 KELEDMILGAEDKLINLEYDLFCEVRNRIAAEVVRIQKTAKAVAKLDTFVSLAVVADQNN 564
Query: 513 YMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
Y RP + ++DI++GRH + E M D FI NDT +DN + RI+IITGPN +GKS Y+
Sbjct: 565 YCRPKINENGVIDIKDGRHPVVEKMMNNDMFIANDTYLDNGNNRISIITGPNMAGKSTYM 624
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q A+IV ++ IGSFVPA +A +G+ D S + + QS+FM+++++V +LR A
Sbjct: 625 RQTAIIVLMAQIGSFVPASSAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNA 684
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKS 679
TS SL +LDE G+GT T DG+ + + + + K L TH EL EG L
Sbjct: 685 TSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGKL--- 741
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ Y ++V +DIVFL ++V G A SYG+ A LAGVP VI+RA ++
Sbjct: 742 HNVNNYCIAV------KEKGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIERAKQIV 795
Query: 740 EAAQNN 745
E N
Sbjct: 796 EELSAN 801
>gi|168211840|ref|ZP_02637465.1| DNA mismatch repair protein MutS [Clostridium perfringens B str.
ATCC 3626]
gi|170710211|gb|EDT22393.1| DNA mismatch repair protein MutS [Clostridium perfringens B str.
ATCC 3626]
Length = 895
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISIVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|182626334|ref|ZP_02954089.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
gi|177908353|gb|EDT70898.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
Length = 909
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|166031820|ref|ZP_02234649.1| hypothetical protein DORFOR_01521 [Dorea formicigenerans ATCC
27755]
gi|166028273|gb|EDR47030.1| DNA mismatch repair protein MutS [Dorea formicigenerans ATCC 27755]
Length = 874
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 300/629 (47%), Gaps = 82/629 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDK 190
ASG LL L KE+ S++ + +I + K++ LD+ L++ +T +
Sbjct: 230 ASGALLIYL-----------KETQKTSLSHMSRLIPYAAGKYMLLDSATRRNLELCETLR 278
Query: 191 HPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE 250
G S+ +++K T MG R LR + +P++ ++ RL+A++ L +
Sbjct: 279 EKQKRG--------SLLWVLDKTKTAMGARNLRKYIEQPLVQKYDIEKRLDALNELLDNA 330
Query: 251 ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESL 310
+ E L + D+ ++ K S D AF S+ L H+ I S L
Sbjct: 331 ISREEIREYLSPIYDLERLVSKITYQSA--NPRDMIAFESSLSMLPHIKYILSEMTSPLL 388
Query: 311 REQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
+E + D +E + I + L + KE G ++R+G+ E+D+LR
Sbjct: 389 KELYE--DLDTLEDLCTLIKDAIQEDPPLAM--------KE---GGIIRDGYNPEVDKLR 435
Query: 371 QIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL 428
+ ++L ++ S E + +L I Y GY LE
Sbjct: 436 SAKSDGKDWLAKLESDEREKTGIKNLK-------IKYNKVFGYY------------LEVT 476
Query: 429 QGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
F+ D + L Y P+ +EL++ + K+ +E + D+ S +
Sbjct: 477 NSFKDLVPDYYTRKQTLANAERYIIPELKELEDTILGAEDKLYSLEYELYSDIRSRVAKD 536
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFI 542
+ K A++D SLALVA QNNY+RP + + ++DI++GRH + E + D FI
Sbjct: 537 VVRVQKTAKVIAQIDTLASLALVAEQNNYVRPKINEKGVIDIKDGRHPVVEKMIPNDMFI 596
Query: 543 PNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
NDT + D RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA A +GL D
Sbjct: 597 SNDTYLNDKKDRIAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPASKADIGLVDRIFTR 656
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+ + I +
Sbjct: 657 VGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHIS 716
Query: 654 TCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
+ K L TH EL EG K + + Y ++V EN +DI+FL ++V G
Sbjct: 717 NSKLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV--KENG----DDIIFLRKIVKG 767
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLE 740
A SYG+ A LAGVP V RA ++E
Sbjct: 768 GADKSYGIQVAKLAGVPESVTDRAKEIVE 796
>gi|422874017|ref|ZP_16920502.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
gi|380305012|gb|EIA17295.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
Length = 909
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 288/602 (47%), Gaps = 68/602 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISIVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LE 740
LE
Sbjct: 796 LE 797
>gi|270013873|gb|EFA10321.1| hypothetical protein TcasGA2_TC012537 [Tribolium castaneum]
Length = 800
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 317/645 (49%), Gaps = 75/645 (11%)
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
++NS+++ + V A+G L+ L+ T + V +VSL L +D
Sbjct: 178 HINSLLNFDYKCSVHAAGALVKYLDK-----TWAHFLPNKDELQFLQVTQVSLRGHLLID 232
Query: 177 ATAHEALQIFQTDKHPSHMGIG---RAKEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILD 232
T +ALQIFQ H + G +EG SV+ + + C + +G+ L+N +P+ D
Sbjct: 233 WTTLKALQIFQQCSHDASFKRGLQSSNREGLSVYRLFSSSCKSKLGQICLKNILHKPLND 292
Query: 233 LENLNSRLNAISFFL--CSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+ ++ RL+ ++F L +++ + SL + ++ + D+ I F+ + TA +
Sbjct: 293 IHEISKRLDFVTFVLHPSNQDFVESLQDNIRNLSDVSSIYHTV----FL---RELTAPYQ 345
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
C LL + + +T EL + + ID + SK
Sbjct: 346 DACELL--------------------------SEFYNSVTMELLGLENSMNNAIDFSDSK 379
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
+++ GF + LD + +++ + + A + QLP E IVY+ ++G
Sbjct: 380 NSSR-PVIKTGFDESLDAKKLRRQDIAQHVRAAAGVAAEQLPDYLNEC---SIVYLPEMG 435
Query: 411 YLMCIFEEK--LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+L+ I E K D L+ L GF+F F+ + G + Y P ELD LGDI +I+
Sbjct: 436 HLVAINEWKPNCDPEELKDL-GFQFMFT-LRG---TIHYKNPLCLELDENLGDINAEIIA 490
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
E I + L S I ++ + + + + D +++A V+ QNNY+RP L + + +I+
Sbjct: 491 HENRILQRLSSFILKYNKDIREPLRVLSLFDALIAIAKVSAQNNYVRPALNNQNMHEIRE 550
Query: 529 GRHVLQEMTVDTFIPND-TRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
RH L E+ V F PND ++ I IITGPN SGKS+Y+K+VAL+++ +HIGS+VPA
Sbjct: 551 CRHPLLEL-VSNFEPNDFCSGNHHSHIKIITGPNGSGKSVYLKEVALVIYFAHIGSYVPA 609
Query: 588 DAATVGLTDSKH--MTAEQ------SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A +G+ H M A + S+FMID Q + A SL LLDEFG+GT E
Sbjct: 610 RSANIGILHCIHSRMQATESAAVRLSAFMIDAIQATQAIHNARHNSLILLDEFGRGTTVE 669
Query: 640 DGIGLLGGTI-NYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ LL G + ++ + P +LV TH + LP+ +++ M+ E N T
Sbjct: 670 DGLALLVGFLADFHKQGNNCPHILVSTHHQSI--SDFLPEDGVVEYLKMA--HSEENGT- 724
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQ 743
++FLY++ G + S+ + A GV A +IKRA + E +
Sbjct: 725 ---LLFLYKVAKGVS-RSFAIKIAAEVGVDASIIKRANELFEKKK 765
>gi|336432331|ref|ZP_08612166.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018668|gb|EGN48405.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_58FAA]
Length = 883
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 300/612 (49%), Gaps = 84/612 (13%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R+LR +
Sbjct: 262 TTGKYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARMLRKYVE 313
Query: 228 RPILDLENLNSRLNAISFF----LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P+++ + + RL+A+ +C EE+ E L V D+ ++ K S
Sbjct: 314 QPLIEKKEILRRLDAVEELKEQAICREEI----REYLSPVYDLERLVTKVTYGSA--NPR 367
Query: 284 DWTAFLKSICSLLHVNKIFE---VGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D TAF S+ L + I E + E ++E+L D +E ++ I +A L
Sbjct: 368 DLTAFGSSLTMLPPICCIMEDLRAPLLEEIKEEL-----DPLEDISALIKEAIAEEPPLA 422
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEM 398
+ KE G ++R+G+ +E+D LR+ E ++L ++ S E + +L
Sbjct: 423 M--------KE---GGIIRDGYSEEVDTLRRAKSEGKDWLAKLESEEREKTGIKNLK--- 468
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRE 454
I Y GY LE F+ D + L Y P+ +E
Sbjct: 469 ----IKYNKVFGYY------------LEVTNSFKDMVPDYYTRKQTLANAERYIIPELKE 512
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
L++ + K+ +E I D+ + I + + A++D F SLALVA ++NY+
Sbjct: 513 LEDTILGAEDKLYALEYEIYCDVRNQIAAQVERIQTTAKAIAKVDVFASLALVAERSNYV 572
Query: 515 RPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQ 571
RP + + ++DI++GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q
Sbjct: 573 RPKINEQGVIDIKDGRHPVVEKMIPNDMFISNDTYLDDKKQRISIITGPNMAGKSTYMRQ 632
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
ALIV ++ +GSFVPA +A +GL D S + + QS+FM+++ +V +LR ATS
Sbjct: 633 AALIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATS 692
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSER 681
+SL +LDE G+GT T DG+ + + Y + K L TH EL EG K
Sbjct: 693 KSLLILDEIGRGTSTFDGLSIAWAVVEYISDNKLLGAKTLFATHYHELTELEG---KIHN 749
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+ Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA ++E
Sbjct: 750 VNNYCIAV------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDVVITRAKEIVEE 803
Query: 742 AQNNKHVERWSH 753
+ R S
Sbjct: 804 LSDEDITTRVSE 815
>gi|238924112|ref|YP_002937628.1| DNA mismatch repair protein MutS [Eubacterium rectale ATCC 33656]
gi|238875787|gb|ACR75494.1| DNA mismatch repair protein MutS [Eubacterium rectale ATCC 33656]
Length = 874
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 317/645 (49%), Gaps = 74/645 (11%)
Query: 160 TIDSVIEV---SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
++D+++E+ S+ K++ +D+++ L++ T + G S+ +++K T
Sbjct: 245 SLDNILELHPYSIGKYMIIDSSSRRNLELVDTLREKQKRG--------SLLWVLDKTRTA 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG RLLR + +P+++ + R I +E + E L + D+ ++ +
Sbjct: 297 MGARLLRTYVEQPLIEKAEIIKRQKLIEALNANEITRDEIREYLNPIYDLERLITRITYQ 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
S D AF S+ L +++QL + ++ ++ EL +
Sbjct: 357 SA--NPRDLIAFRDSLKML------------PPIKQQLSDIPCELTDEINEEFD-ELKDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
YEL++ I+ + G +++ G+ +E+D LR + +L E+ + E + K
Sbjct: 402 YELLLSSIEDEPPISQRDGDIIKAGYNEEVDRLRDAKTKGKTWLAELEAGEREKTG--IK 459
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKT 452
+ + Y GY LE F+ D + L Y TP+
Sbjct: 460 NLRIK---YNKVFGYY------------LEVTNSFKDMVPDYYVRKQTLTNAERYITPEL 504
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+EL++ + ++ +E + RD+ I + K A++D F SLALVA QNN
Sbjct: 505 KELEDTILGAEDRLTSLEYELFRDVRKQISCNVSRIQKTARAIAQIDVFASLALVASQNN 564
Query: 513 YMRPILTLEPLLDIQNGRH-VLQEM-TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYI 569
Y +P + ++DI+NGRH V+++M T D FI NDT +D + RI+IITGPN +GKS Y+
Sbjct: 565 YCKPKINESGIIDIKNGRHPVVEKMITNDMFIENDTYLDQHKNRISIITGPNMAGKSTYM 624
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV ++ IGSFVPA A +G+ D S + + QS+FM+++++V +LR A
Sbjct: 625 RQTALIVLMAQIGSFVPAQTANIGIVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNA 684
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKS 679
T++SL +LDE G+GT T DG+ + + + + K L TH EL EG L
Sbjct: 685 TAKSLLILDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGKL--- 741
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ + Y ++V +DIVFL ++V G A SYG+ A LAG+P VI+RA +
Sbjct: 742 DSVNNYCIAV------KEKGDDIVFLRKIVKGGADRSYGIQVAKLAGLPDSVIERAKEIA 795
Query: 740 EAAQNN---KHVERWSHENISAQDQQYKNAVE--KMLAFDVLKGD 779
E N V+ S +N +++ + V+ ++ FD +K D
Sbjct: 796 EQLLANDITDTVKSISVDNGHKHKKEHLDEVDMTQISLFDTVKDD 840
>gi|170755080|ref|YP_001781348.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
gi|189030762|sp|B1IM68.1|MUTS_CLOBK RecName: Full=DNA mismatch repair protein MutS
gi|169120292|gb|ACA44128.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
Length = 932
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 297/610 (48%), Gaps = 65/610 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAYVY 337
A + + SI + ++ K L NF D+ CI T L ++
Sbjct: 359 -NAKELISLKCSIGKVPYIKKY--------------LSNFKSDLFLNMEQCIDT-LEDIH 402
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 403 KLLDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIK 459
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ Y GY + I + L+ +G + + Y TP+ +E++
Sbjct: 460 SLK--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEE 510
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ K++D+E + + I D + K +++DC SLA VA +NNY++P
Sbjct: 511 KILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPN 570
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVAL 574
+ + + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVAL
Sbjct: 571 INAKNEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVAL 630
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
I ++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL
Sbjct: 631 ITIMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSL 690
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
LLDE G+GT T DG+ + I Y ++ K L TH EL E +K Y
Sbjct: 691 VLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNY 748
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
++SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+
Sbjct: 749 SVSVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ----- 797
Query: 746 KHVERWSHEN 755
H+E EN
Sbjct: 798 -HIEGDKEEN 806
>gi|220932004|ref|YP_002508912.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
gi|254766630|sp|B8CX98.1|MUTS_HALOH RecName: Full=DNA mismatch repair protein MutS
gi|219993314|gb|ACL69917.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
Length = 896
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 314/663 (47%), Gaps = 95/663 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ + +L ++ LD+ L++ T + H G S+ ++++ +T MG R
Sbjct: 254 INRITTYNLTDYMVLDSATRYNLELTSTIRGNKHKG--------SLLNVLDQTITSMGGR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L++ W +P++D + +RL+A+ + + L+ + E LK + D+ IL K + S
Sbjct: 306 LIKKWINQPLIDRNKIETRLDAVEELVNNYLLLQEIREHLKGIYDLERILGKVSYGS--A 363
Query: 281 TASDWTAFLKSICSLLHVNKIFE---VGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
A D A SI L + K E + +++ E FD + A + + + V
Sbjct: 364 NARDLAALKYSILKLPQIKKDLEQLNTKLFKNMHE-----TFDPLIDLAGLL--DRSIVD 416
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
E + + + G L+++G+ ELDELR+ E ++ +A+L+ +
Sbjct: 417 EPPVSVRE---------GGLIKDGYSSELDELRKARTEGKDW---IANLQKTERERTGIS 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ + GY + I + LD + + S+ + TP+ +E +
Sbjct: 465 SL--KVGFNKVFGYYIEITKANLDRVPDNYTRKQTLSNSER--------FITPELKEKEA 514
Query: 458 LLGDIYHKILDME-------RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
L+ KI D+E R I RD + I K ++LD SLA A +
Sbjct: 515 LVLGAEEKINDLEYKLFVKIRDIVRDNIKRIK-------KTAAIISKLDVLTSLAQNALE 567
Query: 511 NNYMRPILTLEPLLDIQNGRH-VLQEMTVDTFIPNDTRID-NDGRINIITGPNYSGKSIY 568
+Y RP + + +++I GRH V+++M F+PNDT +D + R IITGPN SGKS Y
Sbjct: 568 RDYNRPRINNDGVIEIIKGRHPVVEDMGKGAFVPNDTYLDLEEERFIIITGPNMSGKSTY 627
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVALIV ++ +GSFVPAD AT+G+ D S +T QS+FM+++++V ++
Sbjct: 628 MRQVALIVLMAQMGSFVPADKATIGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNN 687
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKS 679
AT SL +LDE G+GT T DG+ + Y D + + L TH EL L
Sbjct: 688 ATRNSLIILDEVGRGTSTYDGLSIAWAVSEYINNPDRIGARTLFATHYHELTQ---LENR 744
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+K Y + V D + + FL++++PG A SYG+ A LAG+P E+I RA +L
Sbjct: 745 PGIKNYNVLV------EEDEDGVHFLHKIIPGKASESYGIEVAQLAGLPMEIIIRAQEIL 798
Query: 740 EAAQN------------NKHVERWSH----ENISAQDQQY---KNAVEKMLAFDVLKGDL 780
+ NK++ + NI D++Y +N +K+ + K +
Sbjct: 799 AELEKKGKESTKTGKGENKNISHKTESDLINNIHESDKEYLTKRNTNDKVQQLPLFKSEY 858
Query: 781 RLF 783
R+
Sbjct: 859 RVI 861
>gi|435853699|ref|YP_007315018.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
gi|433670110|gb|AGB40925.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
Length = 878
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 313/628 (49%), Gaps = 76/628 (12%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
++A+G +L L V+T QK S N I+ + S ++ LDA L++ QT
Sbjct: 236 IQAAGAILDFL-----VET--QKRSLNH---INQLATYSTTDYMVLDANTRRNLELTQTM 285
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ S G S+ ++++ VT MG R L+ W +P+L+L+ + RL+A+ +
Sbjct: 286 RDKSKRG--------SLLWVLDQTVTAMGGRKLKKWVEQPLLELDRIEYRLDAVEEITKN 337
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
L E L V DI +L K IY +++ + S+ S LH+ + + +
Sbjct: 338 IFAKEELKELLTEVYDIERLLGKI-----IYGSANARDLI-SLKSSLHILPEVKEVLDQF 391
Query: 310 LREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
+L+ L N D +E A C L+ I + G+++++G+ ++LD
Sbjct: 392 KTPKLKKLQDNLDKLEDVA-C----------LIENSIKEDPPTTLTEGSIIKKGYDNQLD 440
Query: 368 ELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFEEKLDDTTL 425
EL + E +++ ++ E + + + H GY + + + LD
Sbjct: 441 ELLEAMENGKQWIIDLQKQE-------RERTGISSLKVGHNKVHGYYIEVTKANLDAVPE 493
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
+ ++ + S+ Y TP+ ++ ++++ ++E + ++ + +
Sbjct: 494 DYVRKQTLSNSER--------YITPELKDKESVILGAQENSKELEYKLFVEIRDKVAQET 545
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIP 543
+ + K+ A+LD LSLA VA N+Y +P L + +DI+ GRH V + M + F+P
Sbjct: 546 ERIQKSATILAQLDALLSLAEVALNNDYTKPQLNTDDQIDIEAGRHPVVEEMMEEEVFVP 605
Query: 544 NDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------ 596
NDT +D R IITGPN SGKS Y++QVALIV L+ IGSFVPAD A + + D
Sbjct: 606 NDTYLDQQSDRFGIITGPNMSGKSTYMRQVALIVLLAQIGSFVPADKAKLSIVDRIFTRV 665
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
S +T QS+FM+++++V +L AT+ SL +LDE G+GT T DG+ + Y
Sbjct: 666 GASDDLTTGQSTFMVEMNEVANILNNATANSLIILDEVGRGTSTYDGLSIAWAVTEYISN 725
Query: 655 CD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ + K L TH EL E LP ++ Y ++V + +D+VFL++++PG
Sbjct: 726 PEKIGAKSLFATHYHELTELEERLPG---VRNYNVAV------KEEGDDVVFLHKIIPGE 776
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLE 740
A SYG+ A LAGVP+EV R+ +L+
Sbjct: 777 ANQSYGIEVAKLAGVPSEVTNRSKEILD 804
>gi|390934967|ref|YP_006392472.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570468|gb|AFK86873.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 857
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 301/593 (50%), Gaps = 69/593 (11%)
Query: 170 NKFLKLDATAHEALQI-FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
N F+ LD L+I + ++ S G ++ ++++ VTPMG RLL+ W
Sbjct: 261 NSFMLLDNNTIRNLEIIYSINRDHSKSG--------TLLSVLDQTVTPMGGRLLKRWLEE 312
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++D+E +N RL+++S + + + + LK + D+ + S +Y +
Sbjct: 313 PLIDVEKINYRLDSVSELYNDYKGRSDIRDILKGIYDLERL-----SSKLVYQNINAKDL 367
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L S+ + K L++ L N + +++ + + T L +++L+ I +
Sbjct: 368 LSIKISIERLPK---------LKQLLNKYNSNYLKEIFTKLDT-LQDIHDLIDKSIKDDP 417
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
S G ++++GF +DELR+ + + +A+LE + + I Y
Sbjct: 418 SSNVKEGNIIKDGFDKNIDELRRASIDGKSW---IANLEAYEKEKTGIKTL--KIGYNKV 472
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD-NLLG------D 461
GY + + + + ++ A ++ Y TP+ ++++ +LG +
Sbjct: 473 FGYYIEVSKSYISSVPENYIRKQTLANAER--------YITPELKDIEEKILGAETKLVE 524
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
+ ++I D R ++ + I + S H+ A LD +SLA VA NNY++P++
Sbjct: 525 LEYEIFDSIREQIKNEIYRIQMTSRHI-------AILDVLVSLATVAETNNYVKPVVNGS 577
Query: 522 PLLDIQNGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+ I++GRH V++ + D+FI ND ID I IITGPN +GKS Y++QVALIV ++
Sbjct: 578 DRIVIKDGRHPVIETIMDDSFISNDIEIDGKKPIMIITGPNMAGKSTYMRQVALIVLMAQ 637
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPA A +G+ D S + + QS+FM+++++V ++L AT SL +LDE
Sbjct: 638 IGSFVPASYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEV 697
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
G+GT T DG+ + + Y + + K + TH EL N K + +K Y +SV
Sbjct: 698 GRGTSTYDGMSIACAILEY-IHDKIKAKTMFATHYHELTN--LEDKLDGIKNYNISV--- 751
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
TD ++I+FL +++PG A SYG+ A LAG+P EV++ A +L +N+
Sbjct: 752 --EETD-DEIIFLRKIIPGAADKSYGIQVAKLAGLPDEVVQNAKKILNNLENS 801
>gi|18310137|ref|NP_562071.1| DNA mismatch repair protein MutS [Clostridium perfringens str. 13]
gi|44888232|sp|Q8XL87.1|MUTS_CLOPE RecName: Full=DNA mismatch repair protein MutS
gi|18144816|dbj|BAB80861.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 909
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 288/602 (47%), Gaps = 68/602 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S LR L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLRNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P +VI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDDVINRAKEI 795
Query: 739 LE 740
LE
Sbjct: 796 LE 797
>gi|429246332|ref|ZP_19209662.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
gi|428756642|gb|EKX79184.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
Length = 882
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 297/610 (48%), Gaps = 65/610 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAYVY 337
A + + SI + ++ K L NF D+ CI T L ++
Sbjct: 359 -NAKELISLKCSIGKVPYIKKY--------------LSNFKSDLFLNMEQCIDT-LEDIH 402
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 403 KLLDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIK 459
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ Y GY + I + L+ +G + + Y TP+ +E++
Sbjct: 460 SLK--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEE 510
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ K++D+E + + I D + K +++DC SLA VA +NNY++P
Sbjct: 511 KILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPN 570
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVAL 574
+ + + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVAL
Sbjct: 571 INAKNEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVAL 630
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
I ++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL
Sbjct: 631 ITIMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSL 690
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
LLDE G+GT T DG+ + I Y ++ K L TH EL E +K Y
Sbjct: 691 VLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNY 748
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
++SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+
Sbjct: 749 SVSVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ----- 797
Query: 746 KHVERWSHEN 755
H+E EN
Sbjct: 798 -HIEGDKEEN 806
>gi|220929119|ref|YP_002506028.1| DNA mismatch repair protein MutS [Clostridium cellulolyticum H10]
gi|254766623|sp|B8I2Q5.1|MUTS_CLOCE RecName: Full=DNA mismatch repair protein MutS
gi|219999447|gb|ACL76048.1| DNA mismatch repair protein MutS [Clostridium cellulolyticum H10]
Length = 873
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 313/633 (49%), Gaps = 82/633 (12%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
++ V ASG LL LE+ + V+ L + N+ +L +++ LDA++ L++
Sbjct: 231 DIAVNASGALLKYLESTQKVN-LSHIQKFNS---------YALEEYMILDASSRRNLELT 280
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + S G S+ +++K +T MG RLLR W +P+++ +++ RL+A+
Sbjct: 281 ETMREKSKKG--------SLLWVLDKTMTSMGGRLLRKWIEQPLINHGDISLRLDAVEEL 332
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI---FE 303
+ E LK V DI ++ K S D A S+C + ++ + FE
Sbjct: 333 KNKFMVRVEARELLKRVYDIERLMGKVVLGSV--NCRDLIALKNSMCQIPYIKSLLNGFE 390
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
++ EQL L D+ C E++ + E + I + G ++++G+
Sbjct: 391 AEYIKNCGEQLDCLE-DV------CNLIEVSIIDEPPVTIKE---------GGIIKDGYN 434
Query: 364 DELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFEEK 419
E+D+LR + +++ E + E + +L K F Y ++ Y + EE
Sbjct: 435 PEVDKLRMASIQGKDWIAALEASQREKTGIKNL-KVGFNRVFGYYIEVTKSYFSLVPEEY 493
Query: 420 LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVS 479
+ TL + Y TP+ +E+++ + KI+ +E ++ ++
Sbjct: 494 IRKQTLSNCER----------------YITPELKEIEDTILGAEEKIIQLEYSLFVEIKE 537
Query: 480 HICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTV 538
I + AE+D SLA VA + Y +P ++L ++I GRH V+++MT
Sbjct: 538 KIAEQLSRIKSTARALAEIDVLASLAEVADREGYCKPEVSLSDKIEIIEGRHPVVEKMTD 597
Query: 539 DT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
+ F+PNDT +D + R+ IITGPN +GKS Y++Q ALIV ++ IGSFVPA A +GL D
Sbjct: 598 KSGFVPNDTVLDMEEDRLAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAATAKIGLVD 657
Query: 597 --------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
S + + QS+FM+++ +V +L AT +SL +LDE G+GT T DG+ +
Sbjct: 658 RIFTRVGASDDLASGQSTFMVEMSEVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAV 717
Query: 649 INYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
I Y V + + + L TH EL EG LP +K Y ++V ED++FL
Sbjct: 718 IEYIVNKEQLGCRTLFATHYHELTELEGKLPG---IKNYCITV------KEKGEDVIFLR 768
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+++ G A SYG+ A LAGVP VI RA +L
Sbjct: 769 KIIRGGADGSYGIQVAKLAGVPQSVIDRAKEIL 801
>gi|110803440|ref|YP_698493.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
gi|123047422|sp|Q0STR4.1|MUTS_CLOPS RecName: Full=DNA mismatch repair protein MutS
gi|110683941|gb|ABG87311.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
Length = 910
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNGEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|169342625|ref|ZP_02863669.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
gi|169299267|gb|EDS81336.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
Length = 909
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
Y+L+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YDLLEKSIKEDPSLTLKDGDLIKDGFNGEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN SGKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMSGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|308494160|ref|XP_003109269.1| CRE-MSH-5 protein [Caenorhabditis remanei]
gi|308246682|gb|EFO90634.1| CRE-MSH-5 protein [Caenorhabditis remanei]
Length = 1451
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 190/688 (27%), Positives = 329/688 (47%), Gaps = 67/688 (9%)
Query: 76 EAPTVKLVK--SSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRAS 133
E P L K ++ F +A RL L V D+ ++ +E+ + D+ + +R+
Sbjct: 178 EGPPATLCKLPNNFFKMPRALERLKML-VGSEDNKMTEEEKYTIVTMRFDIEAVNMMRSF 236
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G LL L+ R+ + E S I S+ ++L + +D +AL I + S
Sbjct: 237 GALLLFLDETRLG---VESEPLTVSPPIKSIKTITLENLVDIDYNTIQALDILPKEVE-S 292
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEE 251
G+ K S++ ++++C + +G++ LR WF P D E L SR + +F + E
Sbjct: 293 KKSTGQNK---SLYSLIDRCRSTVGKKCLRKWFRNPTTDREILVSRQKCVHYFKQDWNAE 349
Query: 252 LMASLHETLKYVKDIPHILKKFNSPS--FIYTASDWTAFLKSICSLLH-VNKIFEVGISE 308
+ + + L VK + ++ ++F S + I+ W F+ ++ +L+ V+ I + IS
Sbjct: 350 VTSKVASILGRVKALNNVFQRFQSGTAKLIH----WECFVSTVNALVEIVHIIRQTPISS 405
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L + LL E++ V + II+ SK +G T++ G ++LD
Sbjct: 406 ELSVENSLLR-------------EVSEVAIITGSIINFAESKIQGRVTVM-PGIDEDLDR 451
Query: 369 LRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLE 426
LR YE +P L +A E + +P + C VYI +G+++ + D +E
Sbjct: 452 LRDTYENMPMMLTAIAKQESARFGIPPYSN---LTC-VYIPLVGFVLSL----PIDFPIE 503
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
+ ++ D L T+ LD+ GDI K++D + AI L + +
Sbjct: 504 SYRDMSLVYATSD----ELRVRNETTQRLDDEYGDILMKLIDSQTAIILILKTRVMKKKR 559
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPND 545
+ K ++ AA D +S+ LVA ++ + P L E +++ H + + V F+PN
Sbjct: 560 SINKLLSLAARTDALVSMGLVAAEHGWNCPTLVDESVIEALELYHPISVLVVKKNFVPNQ 619
Query: 546 TRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMT 601
+G + +IITGPN GKS+Y+K + ++ FL+HIGSFVPA ATVG+ D ++ T
Sbjct: 620 VSSGRNGVKASIITGPNACGKSVYMKSIGILAFLAHIGSFVPARHATVGVVDRIVTRMFT 679
Query: 602 AEQ-----SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
+ S+F D+ QV + LR+ T SL ++DEFGKGT+TE G+ LL + Y++
Sbjct: 680 IDSVLDGMSTFAKDVEQVALALRKGTGNSLVIIDEFGKGTMTEVGLSLLASCMTYWMKKG 739
Query: 657 VP--PKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENNSTDVEDIVFLYRLVPGHA 713
P + + +H L +P + +F T +V R I +L+RL PG
Sbjct: 740 AQRCPHIFLSSHFHALPKH--IPNDNNIAEFLTFTVHREPGGK-----IRYLFRLTPGMV 792
Query: 714 LLSYGLHCALLAGVPAEVIKRAAYVLEA 741
S+ + A G+P ++ RA + +A
Sbjct: 793 DCSFAMAVAKEEGIPTSILGRACRIYKA 820
>gi|168214981|ref|ZP_02640606.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
gi|170713592|gb|EDT25774.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
Length = 909
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 288/602 (47%), Gaps = 68/602 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
YEL+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YELLEKSIKEDPSLTLKDGDLIKDGFNSEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QV++I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVSIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LE 740
LE
Sbjct: 796 LE 797
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 182/634 (28%), Positives = 312/634 (49%), Gaps = 69/634 (10%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S ++F+ LD+ L++ + + G GR ++ ++++ TPMG RLL+ W L
Sbjct: 265 SSSEFMILDSITLRNLEVVKNVR-----GEGRDT---TILQVLDETKTPMGSRLLQKWIL 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF---NSPSFIYTASD 284
+P+L++ ++N RL+A+ + L + L YVKD+ ++ + NS A D
Sbjct: 317 KPLLNVSHINKRLDAVEELSDNTLLRFDVRSHLSYVKDVERLVGRVVYGNS-----NARD 371
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
A KS+ ++ + + E G +++ ++ D E E A V E + +
Sbjct: 372 LVALKKSLQAIPSLLETLE-GEHKAMLARIVQGMKDFREIDTLTDLIERAIVEEPPLSVR 430
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+ G L++ G+ +ELDEL++I + +AS + + + +
Sbjct: 431 E---------GGLIKPGYSEELDELKEISSNAKSW---IASFQQKERDRTGIKSL--KVG 476
Query: 405 YIHQIGYLMCIFEEKL----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y IGY + + + + DD +Q T ++TP+ ++ + +
Sbjct: 477 YNKVIGYYLEVTKPNISQVPDDYIRKQTM------------TNAERFYTPQLKDWEGKIL 524
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K + +E + +++S + S L + ELD SLA VA NNY+RP +T
Sbjct: 525 SADEKRVALEYELFNEVISVVANHSKQLQEMAVLLGELDVLASLAEVAVNNNYVRPSITD 584
Query: 521 EPLLDIQNGRHVLQEMTVD-TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ + I+ GRH + E +VD FIPND +D +D + +ITGPN +GKS Y++QVALIV +
Sbjct: 585 DCRILIRQGRHPVVENSVDGGFIPNDVEMDCSDEQFLLITGPNMAGKSTYMRQVALIVIM 644
Query: 579 SHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ GSFVPA A+VG+ D + + QS+FM+++ ++ +L +T++SL LLD
Sbjct: 645 AQAGSFVPASHASVGIVDRIFTRVGAFDDLASGQSTFMVEMVELANILNNSTAKSLVLLD 704
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPP-KVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
E G+GT T DG + + Y + L TH +L +R+K Y ++V
Sbjct: 705 EIGRGTSTYDGYSIAKAVVEYIHNKGRQGVRSLFATHYHQLTE--IAESLKRVKNYHIAV 762
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D +D+VFL ++VPG SYG+H A LAGVP +V KRA +LE ++ +
Sbjct: 763 ------KEDGDDLVFLRKIVPGATDKSYGIHVARLAGVPHKVTKRAQSILEDIESESVIS 816
Query: 750 RWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLF 783
R S ++ ++ ++L D KGD + F
Sbjct: 817 RESE---GSRKRRSGAKYTQLLLVDPEKGDEKDF 847
>gi|189502159|ref|YP_001957876.1| DNA mismatch repair protein MutS [Candidatus Amoebophilus asiaticus
5a2]
gi|189497600|gb|ACE06147.1| hypothetical protein Aasi_0767 [Candidatus Amoebophilus asiaticus
5a2]
Length = 863
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 174/634 (27%), Positives = 304/634 (47%), Gaps = 70/634 (11%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V ASG +L R ++ E KE + I S+ + +K++ LD L+I Q
Sbjct: 230 VIASGAIL------RYLEETEHKEKKH----ITSIARIEEDKYVWLDKFTIRNLEILQ-- 277
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
P G G S+ +++K VTPMG RL++ W + P+ D++ + RL+ + F
Sbjct: 278 --PQQEG------GVSLIEVLDKTVTPMGARLMKKWLVLPLKDIQAIQRRLDIVDLFYQD 329
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
L S+ + LK + D+ ++ K + T D A K++ L + + +
Sbjct: 330 TNLWGSILQELKQISDLERLISKVSVGRA--TPRDLLALQKALQHTLPIQNYLQTSEHDL 387
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L + ++ +C Y+ + + G + N G L+REG ELDEL
Sbjct: 388 L--------IKLSQQLHNC-----EYLADKIRGTLQDNPPLSLTQGDLIREGIDSELDEL 434
Query: 370 RQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
R+I + ++L L+L Q + I Y GY + + ++
Sbjct: 435 RKIAYQGKDYL-----LQLQQKEIKNTGINSLKIAYNKVFGYYLEVTNVHKSKVPASWIR 489
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLL 489
++ Y T + + + + K+L++E+ + + L+ F +L
Sbjct: 490 KQTLVNAER--------YVTEELKTYEEKILQAESKMLEIEQRLYQQLLDSALEFVPQIL 541
Query: 490 KAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVD-TFIPNDT 546
+ A++DC+L+ A A ++ Y +PIL + I+NGRH + Q+++VD +++PND
Sbjct: 542 QNAKILAQIDCYLTFAQEARKHQYTKPILANHKKIIIKNGRHPVIEQQLSVDVSYVPNDI 601
Query: 547 RIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------S 597
+DN+ + + +ITGPN +GKS ++QVALIV ++ IGSFVPA A +GL D S
Sbjct: 602 YLDNETQQVIVITGPNMAGKSALLRQVALIVLMAQIGSFVPASQAEIGLVDKIFTRVGAS 661
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CD 656
++ +S+FM+++ + ++ + +SL ++DE G+GT T DGI + I Y
Sbjct: 662 DNLALGESTFMVEMTETASIMHNLSDRSLIVMDEIGRGTSTYDGISIAWSIIEYLHNHPK 721
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
K L TH EL + ER+K + ++V I+FL +L G + S
Sbjct: 722 YKAKTLFATHYHEL--NQLSDQLERVKNFNVAVKEVAGK------IIFLRKLREGGSEHS 773
Query: 717 YGLHCALLAGVPAEVIKRAAYVL-EAAQNNKHVE 749
+G+H A LAG+P +V++RA+ +L + KH+E
Sbjct: 774 FGIHVAQLAGMPTQVVERASEILGHLEHDKKHIE 807
>gi|226324941|ref|ZP_03800459.1| hypothetical protein COPCOM_02733 [Coprococcus comes ATCC 27758]
gi|225206289|gb|EEG88643.1| DNA mismatch repair protein MutS [Coprococcus comes ATCC 27758]
Length = 883
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 230/815 (28%), Positives = 374/815 (45%), Gaps = 131/815 (16%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ R G+S D + + V E+ +S L+D + Y+ P I + E
Sbjct: 127 YIMCIVYMADRYGLSVADVTTGEYLVTEL----DSQTKLMDEL-YKFMPSEIVCN---EA 178
Query: 63 SFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGL---SIKE--RICY 117
++S L D + +I+S E AW+ DD L +++E ++
Sbjct: 179 FYMSGLDLDDLKNR------LHMAIYSLE-AWY---------FDDALCRETLQEHFKVAS 222
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLD 176
L + E + ASG LL LE E+ S++ + + + ++ LD
Sbjct: 223 LEGIGLSDYECGMIASGALLKYLE-----------ETQKNSLSHMSRLTRYATGNYMVLD 271
Query: 177 ATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
+ L++ +T + G S+ +++K T MG R LR + +P++D E++
Sbjct: 272 SATRRNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRKYVEQPLIDKESI 323
Query: 237 NSRLNAISFF----LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
RL+A++ +C EE+ E L V D+ ++ K S D AF S+
Sbjct: 324 VKRLDAVAELKDNAICREEI----REYLNPVYDLERLVGKITYQSA--NPRDLIAFQSSL 377
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
L V I + S+ L+E L D +E+ + + L + KE
Sbjct: 378 SMLPSVKCILKDMESDLLKEIYEEL--DPLEELCDLVGRAIQEEPPLAM--------KE- 426
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIG 410
G ++++G+ +E+D LR+ E +L E E + +L I Y G
Sbjct: 427 --GGIIKDGYNEEVDRLRKAKSEGKNWLADLETKEREKTGIKNLR-------IRYNKVFG 477
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIYHKI 466
Y LE F+ D + L Y P+ +EL++ + K+
Sbjct: 478 YY------------LEVTNSFKDLVPDYYTRKQTLANAERYIIPELKELEDTILGAEDKL 525
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+E + ++ + I + + A+LD SLALVA +NNY+RP + + ++DI
Sbjct: 526 CALEYELYCEVRNTIAAELTRIQRTAKAVAKLDVIASLALVAERNNYVRPKINEKGVIDI 585
Query: 527 QNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
++GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q ALIV ++ +GS
Sbjct: 586 RDGRHPVVEKMIPNDMFIANDTYLDDKKQRISIITGPNMAGKSTYMRQAALIVLMAQLGS 645
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA +A +GL D S + + QS+FM+++++V +LR ATS+SL +LDE G+G
Sbjct: 646 FVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNATSKSLLILDEIGRG 705
Query: 636 TLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
T T DG+ + + Y + K L TH EL EG K + Y ++V
Sbjct: 706 TSTFDGLSIAWAVVEYISNSKLLGAKTLFATHYHELTELEG---KISNVNNYCIAV---- 758
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
+DIVFL ++V G A SYG+ A LAGVP VI RA ++E +
Sbjct: 759 --KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDPVINRAKEIVEELVTADITGKV-- 814
Query: 754 ENISAQDQQYKNAVEKMLA---------FDVLKGD 779
+NI+ Q + K +K L FD +K D
Sbjct: 815 KNIAVQGSETKKKTQKKLDEVDLTQFSLFDTVKDD 849
>gi|304316821|ref|YP_003851966.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778323|gb|ADL68882.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 857
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 170/590 (28%), Positives = 294/590 (49%), Gaps = 65/590 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD + L+I Q+ P+ +++G ++ ++++ VTPMG RLL+ W P
Sbjct: 261 NSFMLLDNNTIKNLEIVQS---PNR---NNSRDG-TLLSVLDQTVTPMGGRLLKRWIEEP 313
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY---TASDWT 286
++D+E +N RL+++ + + L LK + D+ + S +Y A D
Sbjct: 314 LIDIEKINLRLDSVDELFNDFKGRSDLRNALKGIYDLERL-----SSKLVYQNINAKDLL 368
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+ SI L + + S L+E L D ++ +Y+L+ I
Sbjct: 369 SIKVSIERLPKIKDLISKYNSIYLKEIF--LKLDTLQD-----------IYDLIDKSIKD 415
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
S G ++++GF +DELR+ + + +LEL + + + Y
Sbjct: 416 EPSTSVKEGNIIKDGFDKNVDELRKAATNGKSW---ITNLELNEKERTGIKTL--KVGYN 470
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + + ++ A ++ Y TP+ +E++ + K+
Sbjct: 471 KVFGYFIEVSKSYISSVPQNYIRKQTLANAER--------YITPELKEIEEKILGAETKL 522
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E I + I + + + A LD SLA+VA NNY++PI+ + I
Sbjct: 523 VELEYEIFNGIREQIKNEINRIQMTSKYIAVLDVLTSLAMVAESNNYVKPIVNDGDRILI 582
Query: 527 QNGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
++GRH V++ + D+FI ND ID I IITGPN +GKS Y++QVALIV ++ +GSFV
Sbjct: 583 KDGRHPVIETIVDDSFISNDIEIDEKKPIMIITGPNMAGKSTYMRQVALIVLMAQVGSFV 642
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A +G+ D S + + QS+FM+++++V ++L AT +SL +LDE G+GT
Sbjct: 643 PASYAEIGIVDRIFTRVGASDDLFSGQSTFMVEMNEVSVILNSATQKSLIILDEVGRGTS 702
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPEN 694
T DG+ + + Y + + K + TH LT+L N+ +K Y +SV E
Sbjct: 703 TYDGMSIACAILEY-IHDKIKAKTMFATHYHELTKLENQ-----LNGIKNYNISV--DET 754
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
N ++I+FL +++PG A SYG+ A LAG+P +VI A +L + +N
Sbjct: 755 N----DEIIFLRKIIPGSADKSYGIQVAKLAGLPNDVIDNAKKILNSLEN 800
>gi|238916921|ref|YP_002930438.1| DNA mismatch repair protein MutS [Eubacterium eligens ATCC 27750]
gi|238872281|gb|ACR71991.1| DNA mismatch repair protein MutS [Eubacterium eligens ATCC 27750]
Length = 884
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 204/704 (28%), Positives = 342/704 (48%), Gaps = 103/704 (14%)
Query: 105 MDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
M DGL IK+ V + A+G LL L + ++S + IT S+
Sbjct: 221 MLDGLGIKDY------------PVGIDAAGALLIYL--------TQTQKSDMSHIT--SI 258
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
+ + K++ +D+++ L++ +T + G S+ +++K T MG R LRN
Sbjct: 259 VPYTTGKYMLIDSSSRRNLELVETMREKQKKG--------SLLWVLDKTKTAMGARALRN 310
Query: 225 WFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
L+P+++ + + R +AI + + E L + D+ I+ K + S D
Sbjct: 311 LVLQPLINRDEIIRRQDAIEELSDNAIDREEIREYLGPIYDLERIMTKISCKS--ANPRD 368
Query: 285 WTAFLKSICSLLHV-NKI--FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVI 341
AF S+ + H+ N+I F+ + EQ+ +L +Y LV
Sbjct: 369 LIAFKNSLEMIPHIKNQIGHFKCDVFRQCFEQM----------------DDLKDLYNLVD 412
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
I + G ++++GF E DELR + E+L E+ S E + K + V
Sbjct: 413 TAIIDDPPITMRDGGMIKDGFSAEADELRNAKIKGKEWLAELESREKEKTG--IKNLKVK 470
Query: 402 CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
Y GY + + + + L E+ ++R Y T + + L++++
Sbjct: 471 ---YNKVFGYYLEVT------NSFKNLVPAEWVRKQTLTGSER--YTTDELKHLEDIILG 519
Query: 462 IYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
K+ +E + R+ V+ + + KAV A +D + SL++VA QNN++RP +
Sbjct: 520 AEDKLYSLEYDLFCEVRERVAAEVVRIQNTAKAV---AMIDVYASLSVVATQNNFIRPKI 576
Query: 519 TLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALI 575
+ ++DI+NGRH + E + D FI NDT +DN RI+IITGPN +GKS Y++Q ALI
Sbjct: 577 NEKGIIDIKNGRHPVVEKMISNDMFIANDTYLDNGMNRISIITGPNMAGKSTYMRQTALI 636
Query: 576 VFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V ++ GSFVPAD+A + + D S + + QS+FM+++ +V +LR AT +SL
Sbjct: 637 VLMAQTGSFVPADSANICIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATPKSLI 696
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
+LDE G+GT T DG+ + + Y + K L TH EL EG L + + Y
Sbjct: 697 ILDEIGRGTSTFDGLSIAWAVVEYIANTKYLGAKTLFATHYHELTELEGTL---DGVNNY 753
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL------ 739
++V EN +DIVFL ++V G A SYG+ A LAGVP V+ RA ++
Sbjct: 754 CIAV--KENG----DDIVFLRKIVKGGADKSYGIQVAKLAGVPDVVLNRAKELVVDLSDA 807
Query: 740 EAAQNNKHVERWSHENISAQDQQYKNA----VEKMLAFDVLKGD 779
+ +Q K + ++S + + + +Y+ V++M FD +K D
Sbjct: 808 DISQKAKDIAQYSKK-LDKMNDKYRKVNDLEVKQMSLFDTVKDD 850
>gi|422345812|ref|ZP_16426726.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
gi|373227477|gb|EHP49791.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
Length = 909
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
Y+L+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YDLLEKSIKEDPSLTLKDGDLIKDGFNGEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|110799241|ref|YP_695804.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
gi|123049875|sp|Q0TRD6.1|MUTS_CLOP1 RecName: Full=DNA mismatch repair protein MutS
gi|110673888|gb|ABG82875.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
Length = 910
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 289/605 (47%), Gaps = 68/605 (11%)
Query: 158 SITIDSVIEV-SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
S+T + IEV SL F+ +D ++ L++ + + S G S+ +++K T
Sbjct: 245 SLTNINDIEVYSLVDFMTIDLSSRRNLELTENLREKSKKG--------SLLWVLDKTETS 296
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG R+LR W P+++ E + RLNA+ L SL E L + DI IL K ++
Sbjct: 297 MGSRMLRRWIEEPLVNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNK 356
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D A SI + +V I E S L+ L+ +L +
Sbjct: 357 N--ANAKDLIALKTSIGKIPNVKGIIENCTSSLLKNYHHNLD-------------DLRDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHL 394
Y+L+ I + S G L+++GF E+DELR +++ E E + L
Sbjct: 402 YDLLEKSIKEDPSLTLKDGDLIKDGFNGEIDELRLAKTNGKDWISSLENREREFTGIKSL 461
Query: 395 CKEMFVPCIVY---IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K F Y I + Y + TL + F TP+
Sbjct: 462 -KVGFNKVFGYYIEISKANYSSIPEGRYIRKQTLANAERF----------------ITPE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E++ L K+ +E I D+ + + D L AELDC +LA VA +N
Sbjct: 505 LKEIEEKLLGASEKLCSLEYDIFLDIRNEVENHIDRLKTTAKIIAELDCISNLAFVALEN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIY 568
++++P + + I+NGRH + E + FIPNDT I+ +D ++ IITGPN +GKS Y
Sbjct: 565 DFIKPEINEDGETKIENGRHPVVEKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTY 624
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++QVA+I + IGSFVPA A + + D S + +S+FM+++ +V +L+
Sbjct: 625 MRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKN 684
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPK 678
AT SL LLDE G+GT T DG+ + I Y ++ K L TH EL EG +
Sbjct: 685 ATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCKTLFATHYHELTKLEGEI-- 742
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
++ Y+++V +NN I+FL +++ G A SYG+ A LAG+P EVI RA +
Sbjct: 743 -HGVRNYSVAVKEVDNN------IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEI 795
Query: 739 LEAAQ 743
LE +
Sbjct: 796 LETLE 800
>gi|347531827|ref|YP_004838590.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
gi|345501975|gb|AEN96658.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
Length = 874
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 310/637 (48%), Gaps = 77/637 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S K++ +D++ L++ +T + G S+ +++K T MG RLLR++
Sbjct: 256 STGKYMIIDSSTRRNLELVETLREKQKRG--------SLLWVLDKTKTAMGARLLRSYVE 307
Query: 228 RPILDLENLNSRLNAI----SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P++D + R +AI + EEL E L + D+ ++ +
Sbjct: 308 QPLIDKAEIEKRQDAICELNQHVITREEL----REYLNPIYDLERLITRVTY--LTANPR 361
Query: 284 DWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D AF SI L + + F+ + +RE + D +E+ C + A + E
Sbjct: 362 DLIAFRSSIAMLPPIKSLLGDFQCELLGEIREDM-----DTLEEL--CALIDRAIMEEPP 414
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + D G L+++G+ +++D+ R+ E +L E+ + E + K + +
Sbjct: 415 ISVRD---------GGLIKDGYNEDVDKYRKAKTEGKTWLAELEAKEREKTG--IKNLKI 463
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + + + + L F +R Y TP+ +EL++++
Sbjct: 464 K---YNKVFGYYLEVT------NSYKDLVPDYFMRKQTLANAER--YITPELKELEDMIL 512
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K++ +E + ++ S I + + A LD F+SLALVA QNNY RP +
Sbjct: 513 GAEDKLVTLEYDLFCEVRSTIAAEVVRIQRTAKAVAGLDVFVSLALVADQNNYCRPKINE 572
Query: 521 EPLLDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
++DI+ GRH + E + D FI NDT +DN + RI+IITGPN +GKS Y++Q ALIV
Sbjct: 573 NGIIDIKGGRHPVVEKMINNDMFIDNDTYLDNGNHRISIITGPNMAGKSTYMRQTALIVL 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA +A +G+ D S + + QS+FM+++++V +LR ATS SL +L
Sbjct: 633 MAQLGSYVPAASAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNATSNSLLIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + + + K L TH EL EG K + Y +
Sbjct: 693 DEIGRGTSTYDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEG---KLNNVNNYCV 749
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+V +DIVFL ++V G A SYG+ A LAGVP VI RA ++E N
Sbjct: 750 AV------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIARAKEIVEELSANDI 803
Query: 748 VERWSHENISAQDQQYKNAVE-----KMLAFDVLKGD 779
E + ++ ++ K ++ +M FD ++ D
Sbjct: 804 TEVARNISVDTGSKKKKEKLDEVDLTQMSLFDTVRDD 840
>gi|85111213|ref|XP_963830.1| hypothetical protein NCU09384 [Neurospora crassa OR74A]
gi|28925569|gb|EAA34594.1| predicted protein [Neurospora crassa OR74A]
Length = 506
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 239/461 (51%), Gaps = 54/461 (11%)
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF---- 416
G + L EL+ + ++ + L +V L Q+P + C + ++G+L+ +
Sbjct: 22 GTSERLGELKDDFTQVYQILADVKQEILTQIPKWAVQYVQECTT-VPRLGFLIVVALNPE 80
Query: 417 --EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
E + T L + + + + +R +Y ELD++ GD+ +I D E +
Sbjct: 81 SGEGAFNGTGLADDE-----WHQVVKDEQRAYYKNRTMVELDDMYGDLTEEIADEEIEVI 135
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQ 534
+L + D L++A+ ELD L+LA A + N+ P +T E ++DI+ GRH LQ
Sbjct: 136 VELAGAVSEHEDALIRALEVLGELDSLLALAFAAEKYNWAAPKMTSENIIDIEGGRHPLQ 195
Query: 535 EMTVDTFIPNDTRI------DNDGRIN--------------IITGPNYSGKSIYIKQVAL 574
E+ V +FIPND + +N I+ ++TGPN SGKSIY+KQVAL
Sbjct: 196 ELLVPSFIPNDCILRGGCASENGNEIDFVGVKDEPKEPSALVLTGPNNSGKSIYMKQVAL 255
Query: 575 IVFLSHIGSFVPADAATVGLTD------SKHMTA--EQSSFMIDLHQVGMMLRQATSQSL 626
I++L+HIGS+VP AT+G+TD + TA ++S+FM DL Q + AT +SL
Sbjct: 256 IIYLAHIGSYVPVTRATIGVTDRIFTRVATRETAMDDESAFMTDLKQAAFSINFATRRSL 315
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFY 685
L DEFGKGT E G + +++F+ D P++LV TH ++ N G L E + +
Sbjct: 316 ILADEFGKGTTMEAGAAVFTAYLHHFLELDADRPRMLVSTHFHDVFNRGFLKPEEGVAYA 375
Query: 686 TMSV-LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
M V L PE + E I +LYRLV G A S GL CA + + +V+KRA +L +
Sbjct: 376 HMEVRLNPEAEERE-EHITYLYRLVHGRAEHSLGLMCAAINHIEDDVLKRAGDILGMLER 434
Query: 745 NKHVE----RWSHENISAQDQQYKNA---VEKMLAFDVLKG 778
++ +E SHE+I A +K A + LA D+ +G
Sbjct: 435 DEDIEAVFASPSHEDIEA----FKAAELVARRFLATDIPQG 471
>gi|262340946|ref|YP_003283801.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272283|gb|ACY40191.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 803
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 277/557 (49%), Gaps = 58/557 (10%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
KEG + +M++ +TPMG RLL+NW L P++++ ++ R + + L + + L
Sbjct: 285 KEGVPLINIMDQTITPMGGRLLKNWILFPLINIFHIKKRHQIVQKLYSNHILRDFIKKKL 344
Query: 261 KYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
K + DI ++ K SP IYT KS+ S+ + K F L + ++
Sbjct: 345 KDIHDIERMISKMVIGKISPREIYTLH------KSLISISEIKKFF-------LSQDSQI 391
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVN--RSKEKGYGTLVREGFCDELDELRQIYE 374
L DI C + + ++ I N EKG G ++ +GF ELDE+R +Y
Sbjct: 392 LT-DIANSFQDC-----KMISDKIVNTIQENPPHQIEKGKGNVIIKGFSKELDEIRMLYF 445
Query: 375 ELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E+LE++ +E QL + I Y + GY + K +Q A
Sbjct: 446 SQKEYLEKLRKIE--QLNTGINNL---KIGYNNIFGYFFEVKASKKYKVPSHWIQKQTLA 500
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
S R K EL L + KIL +E+ I DL++ I HL K
Sbjct: 501 NSG------RYITEELKNYELKILNAE--QKILSLEKKIFNDLINQILEKIKHLQKNAKE 552
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPNDTRID-N 550
A+LD S + +A +NNY++P + + I GRH + Q ++ ++IPND ++ +
Sbjct: 553 IAKLDVLYSFSNLALENNYVKPEINHSLKIHIIKGRHPVIERQFISKISYIPNDIILNKS 612
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
D +I IITGPN SGKS ++Q A+I+ ++HIGSFVPA A +GL D S +++
Sbjct: 613 DQQIMIITGPNMSGKSAILRQTAIIILMAHIGSFVPAKYAEIGLIDKIFSRVGASDNISL 672
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++++ +L + +S +LDE G+GT T DGI + + + + P L
Sbjct: 673 GESTFMVEMNETASILNNISKRSFLILDEIGRGTSTYDGISIAKSIVEFLHENSLRPMTL 732
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH EL + K R+K Y +S + + +DI+F+ +L+ G + S+G+H A
Sbjct: 733 FATHYHELNEMSTIFK--RIKNYHVSAKQID------DDIIFMRKLMVGGSEHSFGIHVA 784
Query: 723 LLAGVPAEVIKRAAYVL 739
++G+P ++I RA +L
Sbjct: 785 KISGMPIKIINRAEEIL 801
>gi|406957924|gb|EKD85752.1| hypothetical protein ACD_37C00634G0002, partial [uncultured
bacterium]
Length = 602
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 166/574 (28%), Positives = 290/574 (50%), Gaps = 63/574 (10%)
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L++F T + + G S+ ++++ T MG R+LR W L+P++ E++ RLNA
Sbjct: 8 LELFSTIREGNKKG--------SLIHLLDRTKTSMGGRMLRQWLLKPLISKEHIERRLNA 59
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+S FL + + E L + DI ++ + + I + D SL V+KI
Sbjct: 60 VSEFLTKRQKRNEIEEVLLRIVDIERLISRLSVG--IGNSRDLVNLK---LSLGEVDKIK 114
Query: 303 EVGISESLREQLR-LLNFDIVEKAASCITTELAYVYELVIG--IIDVNRSKEKGYGTLVR 359
+ LR+ L D+V S + + V E ++ IDV G +++
Sbjct: 115 NL-----LRDNFEATLIGDLVSNINSDLDNVIKIVNESIVDEPPIDVKN------GGMIK 163
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI-GYLMCIFEE 418
+G +LDE++ ++ ++++E+ + E + V +Q+ GY + I +
Sbjct: 164 QGVDSDLDEIKDSIKDSKKWIQELEARER------ERTGINSLKVKFNQVFGYYIEITKS 217
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
LD + + ++ + TP+ + + ++ KI D+E + + V
Sbjct: 218 NLDSVPADYYRKQTLVNAER--------FITPELKHHEEIILTAEEKIKDLEYKLFLETV 269
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
+ F+ + +A A +DC +S AL++ QNNY RP + L I NGRH + E +
Sbjct: 270 HKVLEFTIEMQQASKSIASIDCLISFALLSEQNNYCRPEVVENGELKIVNGRHPVVEKLL 329
Query: 539 DT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+ F+PND ++ D +++IITGPN +GKS+YI+Q ALI ++ +GS+VPA++A V +
Sbjct: 330 EEKEFVPNDVELNQTDKQLSIITGPNMAGKSVYIRQTALITLMAQMGSYVPAESALVSIV 389
Query: 596 DSKH--------MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + +T+ S+FM+++ + +L AT +SL ++DE G+GT T DG+ +
Sbjct: 390 DKIYVRSGAADVITSGLSTFMVEMVETAHILNNATGKSLIIMDEIGRGTSTYDGVSIAWA 449
Query: 648 TINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
Y V + + PK + TH EL E P +++K + +S + E N ++ FL
Sbjct: 450 VAEYLVNNEKISPKTMFATHYHELQKLEDDYP--QKVKNFQVSAI--EQNG----ELTFL 501
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+++VPG A SYG+ A LAGVP EV +RA VL
Sbjct: 502 HKVVPGGASHSYGIAVANLAGVPKEVTERAMKVL 535
>gi|387817995|ref|YP_005678340.1| DNA mismatch repair protein MutS [Clostridium botulinum H04402 065]
gi|322806037|emb|CBZ03604.1| DNA mismatch repair protein MutS [Clostridium botulinum H04402 065]
Length = 932
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 296/610 (48%), Gaps = 65/610 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKSPIENRLNAVEELLNNISLQEDLKGDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAYVY 337
A + + SI + ++ K L NF D+ CI T L ++
Sbjct: 359 -NAKELISLKCSIGKVPYIKKY--------------LSNFKSDLFLNMEQCIDT-LEDIH 402
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 403 KLLDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIK 459
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ Y GY + I + L+ +G + + Y TP+ +E++
Sbjct: 460 SLK--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEE 510
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ K++D+E + + I D + K +++DC SLA VA +NNY++P
Sbjct: 511 KILGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPN 570
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVAL 574
+ + + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVAL
Sbjct: 571 INAKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVAL 630
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
I ++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL
Sbjct: 631 ITIMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSL 690
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
LLDE G+GT T DG+ + I Y ++ K L TH EL E +K Y
Sbjct: 691 VLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNY 748
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
++SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+
Sbjct: 749 SVSVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ----- 797
Query: 746 KHVERWSHEN 755
H+E EN
Sbjct: 798 -HIEGDKEEN 806
>gi|291536168|emb|CBL09280.1| DNA mismatch repair protein MutS [Roseburia intestinalis M50/1]
Length = 853
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 217/762 (28%), Positives = 359/762 (47%), Gaps = 100/762 (13%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ + G+S D S V EV +++ LID + A +II +E
Sbjct: 145 YIMCIVYLADKYGISLADISTGDYFVTEV----DTERKLIDEINKFAPSEIIC----NES 196
Query: 63 SFLSALKRSDGTTE-APTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLNS 120
++S + SD V +++ FS E A + L + +V ++ GL + + C
Sbjct: 197 FYMSGVDLSDMKNRLGIAVYSLEAWYFSDETAENTLKEHFKVQSLE-GLGLSDYAC---- 251
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
A+G LL R + ++ + GN S ++ S K++ +D++
Sbjct: 252 --------GTIAAGALL------RYLYETQKNDLGNLS----AIHPYSTGKYMIIDSSTR 293
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
L++ +T + G S+ +++K T MG R LR + +P++D + R
Sbjct: 294 RNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQ 345
Query: 241 NAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
AI + EEL L+ + I + + +P D AF SI L
Sbjct: 346 EAIGELNDHVITREELREYLNPIYDLERLITRVTYRTANPR------DLIAFKNSISMLP 399
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ + + E L+ + DI C + + + E I + + G
Sbjct: 400 PIKSLLD----EFDGALLKNIQNDIDAMEELCSLVDRSIMEEPPISVRE---------GG 446
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF 416
L++EG+ +++D+ R E +L E+ + E + K + I Y GY + +
Sbjct: 447 LIKEGYNEDVDKYRNAKTEGKTWLAELEAKEREKTG--IKNL---KIKYNKVFGYYLEV- 500
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
+ + L F +R Y TP+ +EL++++ K++ +E + +
Sbjct: 501 -----TNSYKDLVPDYFTRKQTLANAER--YITPELKELEDMILGAEDKLVSLEYDLFCE 553
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQE 535
+ + I + + A LD F+SLA+VA QNNY RP +T ++DI+ GRH V+++
Sbjct: 554 VRNKIAEEVVRIQRTAKAIANLDVFVSLAVVADQNNYCRPKMTNSGVIDIKGGRHPVVEK 613
Query: 536 M-TVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
M T D FI NDT +DN + RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +G
Sbjct: 614 MITNDMFIDNDTYLDNGNNRIAIITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKIG 673
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
+ D S + + QS+FM+++++V +LR ATS SL +LDE G+GT T DG+ +
Sbjct: 674 IVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIA 733
Query: 646 GGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
+ + + K L TH EL EG L + Y ++V +DIV
Sbjct: 734 WAVVEHISNPRLLGAKTLFATHYHELTELEGKL---NNVHNYCIAV------KEKGDDIV 784
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
FL ++V G A SYG+ A LAGVP VI+RA ++E N
Sbjct: 785 FLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEELSAN 826
>gi|257413988|ref|ZP_04744892.2| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257201595|gb|EEU99879.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 900
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 217/762 (28%), Positives = 359/762 (47%), Gaps = 100/762 (13%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ + G+S D S V EV +++ LID + A +II +E
Sbjct: 145 YIMCIVYLADKYGISLADISTGDYFVTEV----DTERKLIDEINKFAPSEIIC----NES 196
Query: 63 SFLSALKRSDGTTE-APTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLNS 120
++S + SD V +++ FS E A + L + +V ++ GL + + C
Sbjct: 197 FYMSGVDLSDMKNRLGIAVYSLEAWYFSDETAENTLKEHFKVQSLE-GLGLSDYAC---- 251
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
A+G LL R + ++ + GN S ++ S K++ +D++
Sbjct: 252 --------GTIAAGALL------RYLYETQKNDLGNLS----AIHPYSTGKYMIIDSSTR 293
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
L++ +T + G S+ +++K T MG R LR + +P++D + R
Sbjct: 294 RNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQ 345
Query: 241 NAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
AI + EEL L+ + I + + +P D AF SI L
Sbjct: 346 EAIGELNDHVITREELREYLNPIYDLERLITRVTYRTANPR------DLIAFKNSISMLP 399
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ + + E L+ + DI C + + + E I + + G
Sbjct: 400 PIKSLLD----EFDGALLKNIQNDIDAMEELCSLVDRSIMEEPPISVRE---------GG 446
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF 416
L++EG+ +++D+ R E +L E+ + E + K + I Y GY + +
Sbjct: 447 LIKEGYNEDVDKYRNAKTEGKTWLAELEAKEREKTG--IKNL---KIKYNKVFGYYLEVT 501
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
+ + L F +R Y TP+ +EL++++ K++ +E + +
Sbjct: 502 ------NSYKDLVPDYFTRKQTLANAER--YITPELKELEDMILGAEDKLVSLEYDLFCE 553
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQE 535
+ + I + + A LD F+SLA+VA QNNY RP +T ++DI+ GRH V+++
Sbjct: 554 VRNKIAEEVVRIQRTAKAIANLDVFVSLAVVADQNNYCRPKMTNSGVIDIKGGRHPVVEK 613
Query: 536 M-TVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
M T D FI NDT +DN + RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +G
Sbjct: 614 MITNDMFIDNDTYLDNGNNRIAIITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKIG 673
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
+ D S + + QS+FM+++++V +LR ATS SL +LDE G+GT T DG+ +
Sbjct: 674 IVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIA 733
Query: 646 GGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
+ + + K L TH EL EG L + Y ++V +DIV
Sbjct: 734 WAVVEHISNPRLLGAKTLFATHYHELTELEGKL---NNVHNYCIAV------KEKGDDIV 784
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
FL ++V G A SYG+ A LAGVP VI+RA ++E N
Sbjct: 785 FLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEELSAN 826
>gi|170758982|ref|YP_001787121.1| DNA mismatch repair protein MutS [Clostridium botulinum A3 str.
Loch Maree]
gi|189030710|sp|B1KSA3.1|MUTS_CLOBM RecName: Full=DNA mismatch repair protein MutS
gi|169405971|gb|ACA54382.1| DNA mismatch repair protein MutS [Clostridium botulinum A3 str.
Loch Maree]
Length = 932
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 298/608 (49%), Gaps = 61/608 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKIKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + +RLNA+ L + L L E LK + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKTPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ K S + L LN + CI T L +++L
Sbjct: 359 -NAKELISLKCSIGKVPYIKKYLS-----SFKSDL-FLNME------QCIDT-LEDIHKL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + N S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKALLDNPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L+ +G + + Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITKANLNLVP----EGRYIRKQTLSNAER---YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + ++ I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTEIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKEANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL + +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIKGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHEN 755
+E EN
Sbjct: 799 IEGDKEEN 806
>gi|346306310|ref|ZP_08848468.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
gi|345900115|gb|EGX69943.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
Length = 880
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 298/629 (47%), Gaps = 82/629 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDK 190
ASG LL L KE+ S++ + + + K++ LD+ L++ +T +
Sbjct: 236 ASGALLIYL-----------KETQKTSLSHMSRLTPYAAGKYMLLDSATRRNLELCETLR 284
Query: 191 HPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE 250
G S+ +++K T MG R LR + +P++ ++ RL+A++ L +
Sbjct: 285 EKQKRG--------SLLWVLDKTKTAMGARNLRKYIEQPLVQKYDIEKRLDALNELLDNA 336
Query: 251 ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESL 310
+ E L + D+ ++ K S D AF S+ L H+ I S L
Sbjct: 337 ISREEIREYLSPIYDLERLVSKITYQSA--NPRDMIAFESSLSMLPHIKYILSEMTSPLL 394
Query: 311 REQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
+E + D +E + I + L + KE G ++R+G+ E+D+LR
Sbjct: 395 KELYE--DLDTLEDLCTLIKDAIKEDPPLAM--------KE---GGIIRDGYNPEVDKLR 441
Query: 371 QIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL 428
+ ++L ++ S E + +L I Y GY LE
Sbjct: 442 SAKSDGKDWLAKLESDEREKTGIKNLK-------IKYNKVFGYY------------LEVT 482
Query: 429 QGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
F+ D + L Y P+ +EL++ + K+ +E + D+ S +
Sbjct: 483 NSFKDLVPDYYTRKQTLANAERYIIPELKELEDTILGAEDKLYSLEYELYSDIRSRVAKD 542
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFI 542
+ K A++D SLALVA QNNY+RP + + ++DI+ GRH + E + D FI
Sbjct: 543 VVRVQKTAKVIAQIDTLASLALVAEQNNYVRPKINEKGVIDIKEGRHPVVEKMIPNDMFI 602
Query: 543 PNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
NDT + D RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA A +GL D
Sbjct: 603 SNDTYLNDKKDRIAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAAKADIGLVDRIFTR 662
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+ + I +
Sbjct: 663 VGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHIS 722
Query: 654 TCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
+ K L TH EL EG K + + Y ++V EN +DI+FL ++V G
Sbjct: 723 NSKLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV--KENG----DDIIFLRKIVKG 773
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLE 740
A SYG+ A LAGVP V RA ++E
Sbjct: 774 GADKSYGIQVAKLAGVPESVTDRAKEIVE 802
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 282/577 (48%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+++ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ + + +
Sbjct: 271 IQRSRKN-SLLGILDQTKTSMGSRLLKKWIERPLIDIIEINKRLDSVEELKSNYSTLVQV 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + KSI L + + SE L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKKSIEVLPTLKQFLSSFDSELLKEIYEG 387
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ L +Y L+ I+ + G +++EGF +E+D LR I +
Sbjct: 388 LD-------------TLEDIYALIDSSINEDAPVSLKEGGIIKEGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L E E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVEYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K +
Sbjct: 488 NAER--------YITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASN 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + I+NGRH + E + FIPNDT +D +
Sbjct: 540 IANLDVLCSFARIAIDNEYVRPNVYLGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N I+FL ++V G SYG+H
Sbjct: 720 FATHYHELTELEERIPG---VKNYRVDVKEEGKN------IIFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K++ + E
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRRE 807
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
Length = 863
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 285/577 (49%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+K+ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ + ++ +
Sbjct: 271 IQRSKKN-SLLGILDRTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQI 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + +SI L + K+ ++ L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYEG 387
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ L +Y L+ I+ + G ++++GF +E+D LR I +
Sbjct: 388 LD-------------TLEDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L + E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVQYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K ++
Sbjct: 488 NAER--------YITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASY 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + I+NGRH + E + FIPNDT +D +
Sbjct: 540 IAILDVLCSFARIAIDNEYVRPNVCLGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N I+FL ++V G SYG+H
Sbjct: 720 FATHYHELTELEERIPG---VKNYRVDVKEEGKN------IIFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K++ + E
Sbjct: 771 ARLAGIPEEVLKRAGEILKQLEEADINRKNIRKLRKE 807
>gi|336426864|ref|ZP_08606872.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010504|gb|EGN40487.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 882
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 294/608 (48%), Gaps = 58/608 (9%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N+++ LD++ L++ +T + G S+ +++K T MG R+LR++ +P
Sbjct: 264 NRYMLLDSSTRRNLELTETLREKQKRG--------SLLWVLDKTKTAMGARMLRSFLEQP 315
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++ + RL+A+ F + L E L + D+ +L K + + D AF
Sbjct: 316 LIHKTEMEERLDAVEAFCNNPLARDELREYLNPIYDLERLLGKVSYKT--ANPRDLIAFR 373
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ L H+ + L+E N I E+ L ++ L+ I+
Sbjct: 374 NSMEMLPHIKTV--------LKELPGEANQKIEEEIDG-----LEDLFALIGESIEEEPP 420
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G ++REG+ +++D LR+ E +L ++ + E + K + V Y
Sbjct: 421 ITIREGGMIREGYNEDIDTLRRAKTEGKNWLADLENTERERTG--IKNLRVK---YNKVF 475
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + + L+ + ++ ++ Y TP+ +EL++ + + K+ +
Sbjct: 476 GYYLEVTKSYLNMVPEDYVRKQTLTNAER--------YTTPRLKELEDTILNAEDKLCTL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + ++ I + + A LD F S +LVA QN Y RP L + L+ I++G
Sbjct: 528 EYDLFCEIRDQIAGEIERIQTTAKAVARLDVFCSFSLVAEQNQYTRPKLNEKGLIHIKDG 587
Query: 530 RHVLQEMTV--DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E + D FIPNDT +DN+ R I +ITGPN +GKS Y++Q ALIV ++ IGSFVP
Sbjct: 588 RHPVVEKMIEHDMFIPNDTHLDNNTRQIAVITGPNMAGKSTYMRQTALIVLMAQIGSFVP 647
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D S + + QS+FM+++ +V +LR AT SL +LDE G+GT T
Sbjct: 648 ARQADIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATRNSLLILDEIGRGTST 707
Query: 639 EDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
DG+ + I + + K L TH EL EG K + Y ++V
Sbjct: 708 FDGLSIAWAVIEHISNRKLLGAKTLFATHYHELTELEG---KMSNVNNYCIAV------K 758
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
+DIVFL +++ G A SYG+ A LAGVP VI RA ++E +N E+ +I
Sbjct: 759 EKGDDIVFLRKIIKGGADKSYGIQVARLAGVPDLVIDRAKEIVEQLSDNDITEKVQSISI 818
Query: 757 SAQDQQYK 764
+ + K
Sbjct: 819 AENNAPSK 826
>gi|125973295|ref|YP_001037205.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|256003775|ref|ZP_05428763.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281417499|ref|ZP_06248519.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|385778793|ref|YP_005687958.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|419723190|ref|ZP_14250325.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
gi|419724906|ref|ZP_14251961.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|171769986|sp|A3DDI3.1|MUTS_CLOTH RecName: Full=DNA mismatch repair protein MutS
gi|125713520|gb|ABN52012.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|255992336|gb|EEU02430.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281408901|gb|EFB39159.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|316940473|gb|ADU74507.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|380771526|gb|EIC05391.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|380780957|gb|EIC10620.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
Length = 870
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 181/630 (28%), Positives = 313/630 (49%), Gaps = 74/630 (11%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ ASG LL + LEQ + N S I + + +++ LD L++ +T
Sbjct: 234 INASGALL---------EYLEQTQKVNLS-HIQNFNVYRIEEYMILDMATRRNLELTETM 283
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ + G S+ ++++ +T MG R LR W +P+++L ++ RL+A++ F
Sbjct: 284 REKNRKG--------SLLWVLDRTMTSMGGRTLRKWIEQPLINLHDIKDRLDAVNEFKER 335
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
+ + + E L+ V DI ++ K S A + + S+ H +G
Sbjct: 336 FMIRSEVRELLRAVYDIERLMTKVILGS---------ANCRDLISIKH-----SIGQVPY 381
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
++E LR L D+ + + + T L VYE++ I + G +++EGF +E+D L
Sbjct: 382 IKELLRDLKADLNVLSYNELDT-LTDVYEIIDKAIVDDPPVAVKEGGIIKEGFNEEVDRL 440
Query: 370 RQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFEEKLDDTTL 425
R ++ +++ + S E + +L K F Y ++ Y + ++ + TL
Sbjct: 441 RSASKDGKKWIAHLESKERERTGIKNL-KVGFNKVFGYYIEVTKSYYSQVPDDYIRKQTL 499
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
+ Y TP+ +E++N + +++++E I D+ + +
Sbjct: 500 ANCER----------------YITPELKEIENTVLGAEDRLVELEYQIFVDVRNKVAKEI 543
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIP 543
+ L A +D SLA VA + +Y P +T + ++I++GRH + E + + F+P
Sbjct: 544 NRLKTTARSLARIDVLCSLAEVADRESYTMPEVTDDDKIEIKDGRHPVVEKIIGQEAFVP 603
Query: 544 NDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------ 596
NDT +D D +I IITGPN +GKS Y++QVALIV ++ IGSFVPA +A +G+ D
Sbjct: 604 NDTYLDMDENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRV 663
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
S + A QS+FM+++ +V +L ATS+SL +LDE G+GT T DG+ + I Y +
Sbjct: 664 GASDDLAAGQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEY-IG 722
Query: 655 CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
+ + L TH EL + E +K Y +SV EDI+FL +++ G A
Sbjct: 723 EKIGARTLFATHYHELTE--LEERIEGIKNYCISV------EEKGEDIIFLRKILRGGAD 774
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
SYG+ A LAG+P VI RA +L+ ++
Sbjct: 775 NSYGVQVARLAGIPDPVIHRAKEILKKLED 804
>gi|384914572|ref|ZP_10015356.1| DNA mismatch repair protein mutS [Methylacidiphilum fumariolicum
SolV]
gi|384527457|emb|CCG91224.1| DNA mismatch repair protein mutS [Methylacidiphilum fumariolicum
SolV]
Length = 837
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 180/605 (29%), Positives = 288/605 (47%), Gaps = 89/605 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I +++++S ++ L LD+ A + L++ Q + +K G S+F ++K +TP G R
Sbjct: 262 IVTILQLSNSEVLWLDSIAQKTLEVIQAN----------SKSGKSLFHAIDKTLTPGGGR 311
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK----FNSP 276
LLR W P L + R AI+ ++ ++ L E LK + D+ +L K + +P
Sbjct: 312 LLRRWLSEPSRCLPVIQERQQAIALWINQQQKREQLREILKKIGDLERLLSKVSQGYVNP 371
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ + + L I LL S E+LR + DI + E V
Sbjct: 372 RELLSLKESLQRLPLITELL----------SSIQDEKLRAMAQDI--------SIEKDMV 413
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
EL + + N G ++++G+C++LDELR++ E+ + L ++ Q
Sbjct: 414 AELDKAL-EENPPFSIKEGGIIKKGYCEQLDELRELSEQGQKLL-----IDFEQQEREKT 467
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT---- 452
+ I Y GYL+ I S ++ +Y +T
Sbjct: 468 GIKTLKIKYNQVFGYLIEI--------------------SHAQAKSVPSYYERRQTLANV 507
Query: 453 -RELDNLLGDIYHKIL-------DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
R + L +I KIL ++E+ + L I L L K V+ +LD F SL
Sbjct: 508 ERFITRELKEIEQKILGSKNRANELEQELFSKLREKISLRIPVLQKTVDVINKLDVFSSL 567
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNY 562
A +A + Y RP + EP+++I+ GRH V Q + + F+PN T + D RI I+TGPN
Sbjct: 568 ASLAQEKRYCRPSMVDEPIIEIEEGRHPIVEQCLPSEDFVPNSTFLGPDSRILILTGPNM 627
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQV 614
+GKS YI+QVALI L+H GSFVPA A +GL D S ++ QS+F++++++
Sbjct: 628 AGKSTYIRQVALICLLAHTGSFVPAKRAKIGLLDRIFTRIGSSDDLSMGQSTFLVEMNET 687
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG 674
+L AT +SL +LDE G+GT T DG+ L + + L TH EL
Sbjct: 688 ANILHNATERSLVILDEVGRGTSTFDGLSLAWAIVEDLYKTN-KSLTLFATHYHELAKLA 746
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
+K Y+M+V+ E++VFL ++V G SYG+ A LAG+P VI++
Sbjct: 747 DF--YPEIKNYSMAVVE------TTENVVFLRKVVQGSMNKSYGIQVAKLAGIPERVIEK 798
Query: 735 AAYVL 739
A +L
Sbjct: 799 AKKIL 803
>gi|189485482|ref|YP_001956423.1| DNA mismatch repair protein MutS [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287441|dbj|BAG13962.1| DNA mismatch repair protein MutS [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 845
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 184/659 (27%), Positives = 303/659 (45%), Gaps = 102/659 (15%)
Query: 108 GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV 167
GL+ KE +C A G LLA + KE S++I S I+
Sbjct: 214 GLNKKEIVC---------------ACGALLAYI-----------KEMQPQSVSIFSEIKY 247
Query: 168 SLNK-FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
N F+ LD A + L++ + M G+ + S+ +M+ TPMG R +R W
Sbjct: 248 IRNSDFMYLDTAAIKNLELLNS------MTSGKTEN--SLLSVMDSTKTPMGARTIRQWL 299
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
++P+LD+ + +R N + FF+ + + + E LK V DI I + +S S D T
Sbjct: 300 IKPLLDISKIKNRQNIVRFFIKNPNVRKEIVEKLKTVSDIERITARVSSGS--ANPKDLT 357
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY--ELVIGII 344
A S+ ++ +++ I + L F+I E A IT +++ E + +
Sbjct: 358 ALKNSLKTINNISGIIK---------SAEGLGFNIPENAQ--ITNKISSYLSDEPPVSLK 406
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D G ++ G ELDELR++ + ++ + + E + I
Sbjct: 407 D---------GNAIKNGVNAELDELRKMSTDTKAYISNLEAKE-----RAASGINNLKIG 452
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + I + ++ + Y T + + L+ +
Sbjct: 453 YTSVFGYYIEISKSNAASAPKHYVRKQTVTAGER--------YITEELKILEEKILSAQE 504
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
K L +E ++ +LV I +F+ +LK +E+D F A A + NY+ P ++ L
Sbjct: 505 KTLRLENSLFNNLVQEISVFTADILKTSQIISEIDIFCGFAENATEYNYVCPKISEGREL 564
Query: 525 DIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I++GRH + E + F ND D + +I I+TGPN SGKS Y++Q ALIV ++ IG
Sbjct: 565 SIKDGRHPVVERILKNGEFTANDIAFDENSKIMILTGPNMSGKSTYLRQTALIVIMAQIG 624
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVP+ +A +GL D ++ +S+FM+++ + +L Q T +SL +LDE G+
Sbjct: 625 SFVPSQSAEIGLVDKIFTRIGAGDNLAGGESTFMVEMSETANILNQYTQRSLIILDEVGR 684
Query: 635 GTLTEDGIGLLGGTINYFV----TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
GT T DG+ + I + + K L TH EL SE LK
Sbjct: 685 GTSTYDGMSIAWAIIEFLADDKRKANTGAKTLFATHYFELTG-----LSETLKGVV---- 735
Query: 691 RPENNSTDVE----DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
N S D++ D++FL+++V G A SYG+H A +AG+P +VI+RA +L + N
Sbjct: 736 ---NYSVDIKEWNGDVIFLHKIVKGSADKSYGIHVAKIAGMPHQVIERAYEILSRLEKN 791
>gi|322697611|gb|EFY89389.1| DNA mismatch repair protein Msh5, putative [Metarhizium acridum
CQMa 102]
Length = 507
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 231/433 (53%), Gaps = 40/433 (9%)
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
L + EL+ +D +S+ +G T VR G LDELR+ Y+ + FL E+ +P
Sbjct: 19 LVAIGELISHTVDFEQSEYRGRAT-VRLGLDRNLDELRRHYDGMNSFLAEIVVSTTQTVP 77
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG---FEFAFSDMDGETK------ 443
CI ++ Q+G+L+ T L+ G F + D D +
Sbjct: 78 QWAVSHIRSCI-FLPQLGFLIV--------TDLDPRIGKGKFHGNWPDEDHWEQVFVADD 128
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
+Y R LD+ GD+Y KI D E I L + S+ L A + +++ L+
Sbjct: 129 SAYYKNDNMRHLDDQFGDVYCKIADREVEILHILSQEVLKSSESLSVASDACGDVNAILA 188
Query: 504 LALVAHQNNYMRPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRI-----------DND 551
LAL A + ++ P LT +L+I+ GRH LQE+ V +F+PND + +N
Sbjct: 189 LALTAEKYKWIVPKLTTRSGILEIKKGRHPLQELVVPSFVPNDCHLGGGGHNEDDSCENQ 248
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAE 603
R ++TGPN+SGKS+++KQV LIV+L+HIGSFVPA+ A + +TD + + E
Sbjct: 249 SRCMVLTGPNHSGKSVFLKQVGLIVYLAHIGSFVPAEMAVISVTDRILTRISTLESVRKE 308
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVL 662
+S+F IDL Q+ ++Q+TS+SL ++DEFGKGT ++DG GLL + + + V P+ L
Sbjct: 309 ESAFAIDLKQLLNSIKQSTSKSLLIIDEFGKGTNSDDGAGLLASFLEHLSSLAVRAPRSL 368
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
+ TH+ +L L + L+ M VL+ + + + I +L++L G++ +G +CA
Sbjct: 369 LATHMHDLFGCHQLFPASGLQIAHMDVLKAQCEGVNCDYITYLFKLRDGYSSDRFGGYCA 428
Query: 723 LLAGVPAEVIKRA 735
L GVP V++RA
Sbjct: 429 TLNGVPNLVVERA 441
>gi|210621373|ref|ZP_03292609.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
gi|210154797|gb|EEA85803.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
Length = 956
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 305/609 (50%), Gaps = 69/609 (11%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+++ LD L++ QT + G K+G S+ ++++ T MG RLLR + +P+
Sbjct: 263 EYMVLDMFTRTNLELTQTIR-------GGKKKG-SLLHVLDRTSTAMGGRLLRKYVEQPL 314
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
++ E + RLN I L L E LK + DI I K AF K
Sbjct: 315 INKEKIEYRLNIIEEINDDYILKEDLIEILKKIYDIERICGKI-------------AFEK 361
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTE-------LAYVYELVIGI 343
L + + S+ E+L LL + VE ++ I E L +Y+L+
Sbjct: 362 VTPKEL-------INLKHSI-EKLPLLK-ETVENSSCVILKEYINSMDTLEDIYQLIEDS 412
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
I + + G +++ G+ +ELDELR I + ++++ + E + K + I
Sbjct: 413 IKEDPAITIKDGNIIKSGYNNELDELRDISKNGANIIKDIEAKEKERTG--VKSL---KI 467
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
+ GY + I + L +++ + S+ + + TP+ +E++ + +
Sbjct: 468 GFNKVFGYYIEITKTNLAQANIDESYIRKQTLSNAER------FITPELKEIEEKILNAE 521
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
KI +E I ++ S + + + + + A +D + +LA A QN Y++P + E
Sbjct: 522 EKIKAIEYEIFTEIRSAVYKNINRIQEVAHIVANVDVYAALAETASQNGYVKPNINNENR 581
Query: 524 LDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSH 580
L+I+NGRH + E + ++ F+PNDT + + INIITGPN SGKS Y++Q A+I ++H
Sbjct: 582 LEIKNGRHPVVENIVGIENFVPNDTYLKTGENTINIITGPNMSGKSTYMRQTAIIALMAH 641
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPA+ A + + D S ++ QS+FM+++++V M+L+ AT +SL +LDE
Sbjct: 642 IGSFVPAEYADIPIMDRIFTRVGASDDLSQGQSTFMVEMNEVSMILKNATDKSLVILDEI 701
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
G+GT T DGI L + Y + ++ K L TH EL + + + +K Y++ V
Sbjct: 702 GRGTSTYDGISLAWSIVEY-IQKNIKCKTLFATHYHELTD--LEDEFDEVKNYSIGV--- 755
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWS 752
D D++FL +++P A SYG++ A LA +P EVI R++ +L + N HV S
Sbjct: 756 ---KEDGNDVIFLRKIIPQAADKSYGIYVAKLAKLPDEVINRSSEILSDLEKN-HVSNMS 811
Query: 753 HENISAQDQ 761
N + D
Sbjct: 812 VLNALSSDN 820
>gi|410657244|ref|YP_006909615.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|410660280|ref|YP_006912651.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
gi|409019599|gb|AFV01630.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|409022636|gb|AFV04666.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
Length = 850
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 272/560 (48%), Gaps = 59/560 (10%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
E ++F +N T G RLLRNW +P+ D E++N RL ++ + L + + L
Sbjct: 272 EKGTLFSTLNLTKTAFGARLLRNWVQQPLRDPESINERLASVEELTRNTFLRQDIQKALT 331
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF-- 319
V D+ +L K + + D A ++ L V S+ L + L L
Sbjct: 332 TVYDLERLLGKLSLGK--ASPRDLLALGSTLSCLPKVRDCITDNDSQKLAKYLPSLAGLD 389
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
D+ ++ + I E Y G +++ G+ E+D LR I E+
Sbjct: 390 DLAQELLAAINPEAPY---------------SPKDGNIIQNGYSAEIDSLRAISSGGKEW 434
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL----DDTTLEQLQGFEFAF 435
+ + + E + ++ I + GY + I DD +Q
Sbjct: 435 IARLENQERER-----TKIRSLKIGFNKNFGYFIEITNANAHLIPDDYQRKQ-------- 481
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
+ ++ E + TP+ +E + + K+ D+E + L + S ++ A
Sbjct: 482 TLVNAER----FITPELKEYEQRVLTAQDKLSDLEYQLFSVLRDKVLACSLLIINAAQSL 537
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN 555
AE+D F+SLA A QNNY++P + + ++ I GRH + E DTF+PNDT + + +
Sbjct: 538 AEIDVFVSLAGTAIQNNYVKPEIRSDGIIHIVEGRHPVVERICDTFVPNDTYLTRNKHLA 597
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN +GKS Y++QVALIV ++ IGSFVPA A + + D + ++ A QS+F
Sbjct: 598 LITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQKAAISIADCIFTRVGAADNLAAGQSTF 657
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTH 666
M+++++V +L+ AT+ SL +LDE G+GT T DG+ L Y V ++ K L TH
Sbjct: 658 MVEMNEVAHILKNATADSLIILDEVGRGTATFDGLSLAWAIAEYLVENTNIKAKTLFATH 717
Query: 667 LTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
EL E P + + + V E +D+VFL++++PG A SYGLH A +A
Sbjct: 718 YHELTELEERYP-----EVFNLHVAVREQG----DDVVFLHKILPGKADRSYGLHVAKIA 768
Query: 726 GVPAEVIKRAAYVLEAAQNN 745
G+P ++KRAA +L +N+
Sbjct: 769 GLPPHLLKRAAIILGELENS 788
>gi|350272990|ref|YP_004884298.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
gi|348597832|dbj|BAL01793.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
Length = 866
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 302/613 (49%), Gaps = 82/613 (13%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
F++LD TA L++ +T ++ G S+ +++K T MG R LR W RP+L
Sbjct: 271 FMELDLTARRNLELTETLRNKERRG--------SLLWVLDKTKTSMGGRCLRGWLERPLL 322
Query: 232 DLENLNSRLNAISFF----LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+ +N R +A++ + EEL A+++ + D+ ++ + + D A
Sbjct: 323 SVTAINKRNSAVAALVDNTIGREELCAAMNG----LGDLERLIGRITYGT--AGGRDLAA 376
Query: 288 FLKSICSLLHVNKIFEVGISESLRE---QLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+I L + L+E QL LL D+ E +S I E +
Sbjct: 377 LRSAIERLPAIADQLAAFSDRRLKELTDQLDLLQ-DVGELISSAICDEPPFSV------- 428
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+E G+ +REG+ E+D LR + + + + + E + + +
Sbjct: 429 -----REGGF---IREGYDAEVDRLRGVMDGGKGLIANIEAQEKEKTG-----IRTLKVG 475
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
+ GY + + + +D +G+ + ++GE Y T + ++L++ +
Sbjct: 476 FNKVFGYYIEVSKSMIDKVP----EGYVRKQTTVNGER----YITQELKDLEHEILTASE 527
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+++ +E + +L I + + + AE+D SLA VA ++ Y RP + ++
Sbjct: 528 RVVALEYQLFTNLREKIVAQAPRIQRTAAAVAEIDALDSLAAVAVRDGYCRPDVDESGVI 587
Query: 525 DIQNGRH-VLQEMTVDT-FIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
+I GRH V++ + D+ F+PNDT + + + R+ IITGPN +GKS Y++QVALIV L+ I
Sbjct: 588 EITAGRHPVVERVLKDSLFVPNDTFMGEKEQRVAIITGPNMAGKSTYMRQVALIVLLAQI 647
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA AA +G+ D S +TA QS+FM+++ +V +LR AT +SL +LDE G
Sbjct: 648 GSFVPATAAHIGVVDRIFTRIGASDDLTAGQSTFMVEMTEVADILRHATKKSLLILDEIG 707
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKV----LVCTHLTELLN-EGCLPKSERLKFYTMS 688
+GT T DG+ + + Y C P K+ L TH EL E LP + Y ++
Sbjct: 708 RGTSTFDGMSIARAVVEY---CADPKKLGAKTLFATHYHELTELENTLPGTVN---YNIA 761
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
V T EDI+FL ++VPG A SYG+ A LAG+P +V+ RA VLE +N V
Sbjct: 762 V------KTRGEDIIFLRKIVPGGADRSYGIEVARLAGLPDKVVARARTVLEQLENENGV 815
Query: 749 E----RWSHENIS 757
+ R E +S
Sbjct: 816 QYVKPRQEREQVS 828
>gi|270308389|ref|YP_003330447.1| DNA mismatch repair protein [Dehalococcoides sp. VS]
gi|270154281|gb|ACZ62119.1| DNA mismatch repair protein [Dehalococcoides sp. VS]
Length = 858
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 310/628 (49%), Gaps = 68/628 (10%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G LL LE + +L+Q ++ + +++ ++++D+ L+IF++
Sbjct: 227 VSAAGALLNYLEGTQ-KSSLKQ---------LERLSVYTISDYMQIDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L E++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGVLDQTKTAMGGRLLRKFLGQPLLRQEDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
ASL ++L + D+ I + T K + SL H + I +
Sbjct: 329 SLARASLAKSLGQIADMERIANRIR---------QKTILPKELISLKH-----SLEIVSA 374
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
+ Q L+ + + + L + +++ I + G G ++R GF E+D+L
Sbjct: 375 IHRQFGLMPPPRLVYFLNGLKP-LPEMLDIINEAISDDPPSTLGEGKVIRSGFNPEMDKL 433
Query: 370 RQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
+ + FL ++ + E Q K + + Y GY + + L D Q
Sbjct: 434 CSLAGDARTFLSQMEAREREQTG--IKSL---KLGYNRVFGYYIEVSNANLADIP----Q 484
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLL 489
+ + ++ E + TP+ +E +NL+ + ++L+ME + +++ + F LL
Sbjct: 485 NYIRKQTLVNAER----FITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSVLL 540
Query: 490 KAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTR 547
A LD + A VA +N Y+RP+ E L I GRH V Q + +F+ ND
Sbjct: 541 SNAAVLASLDVLSAFAEVAVRNGYVRPVFHPENSLAIHRGRHPMVEQGLGHGSFVANDIS 600
Query: 548 ID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+ D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LTD +
Sbjct: 601 LSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFSRIGARE 660
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDV 657
++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ + + Y + +
Sbjct: 661 DLSAGQSTFMVEMVETASILNSATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSL 720
Query: 658 PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
K L TH EL+ LP R+K Y ++V S D ++VFL+++VPG S
Sbjct: 721 NAKTLFATHYHELVEMANYLP---RVKNYNIAV------SEDRGEVVFLHKIVPGGVDKS 771
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQN 744
YG+H A LAG+P VIKRA VL +N
Sbjct: 772 YGIHVAKLAGMPKWVIKRAYEVLTELEN 799
>gi|424834369|ref|ZP_18259080.1| DNA mismatch repair protein MutS [Clostridium sporogenes PA 3679]
gi|365978715|gb|EHN14784.1| DNA mismatch repair protein MutS [Clostridium sporogenes PA 3679]
Length = 932
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 181/620 (29%), Positives = 299/620 (48%), Gaps = 63/620 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + RLNA+ L + L L E L+ + DI I+ K S
Sbjct: 300 RQLRRWIEQPLINKNPIEDRLNAVEELLNNISLQEDLKEDLRSIYDIERIVGKVACKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ +E L D+ I T L ++EL
Sbjct: 359 -NAKELISLKCSIGKIPYI------------KEYLANFKSDLFLNMEQNIDT-LEDIHEL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + + S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKSLLDSPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L + + +R Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITK-----ANLSSVPEGRYIRKQTLANAER--YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + + I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + IQ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIQEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 LMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHENI--SAQDQQYKN 765
+E + EN A ++YKN
Sbjct: 799 IEGSNEENSLNIAPSKEYKN 818
>gi|300855302|ref|YP_003780286.1| DNA mismatch repair protein MutS [Clostridium ljungdahlii DSM
13528]
gi|300435417|gb|ADK15184.1| predicted DNA mismatch repair protein MutS [Clostridium ljungdahlii
DSM 13528]
Length = 891
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 177/610 (29%), Positives = 300/610 (49%), Gaps = 67/610 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L+I ++ + + G S+ +++K T MG R LR W +P++
Sbjct: 261 YLTIDGNSRRNLEITESLRENNKKG--------SLLWVIDKTNTSMGGRQLRRWLEQPLI 312
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ + RL+++ + L E LK + DI ++ K +S S A + S
Sbjct: 313 NKVKIEERLDSVEEISNNISYHEDLKEALKNIYDIERLVGKISSKSV--NAKELNFLKNS 370
Query: 292 ICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
I + V I F + + + E L EL +Y L+ I N
Sbjct: 371 IEKIPEVKSILSNFHTKLLKYMYENL----------------DELKDIYVLLDKSILDNP 414
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYI 406
+ G L+++G+ ++DEL++I E++ E + E+ ++ L I Y
Sbjct: 415 AISLKEGNLIKKGYNSDIDELKEIKAHGKEWIASLENSEREVTKIKSLK-------IGYN 467
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + L+ E + T Y TP+ +E+++ + K+
Sbjct: 468 KVFGYYIEVTKSNLNLVP-------EGRYIRKQTLTNAERYITPELKEMEDKILGAEEKL 520
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E ++ ++ I + D + K+ +E+DC SLA VA +NNY +P +T + I
Sbjct: 521 INLEYSVFIEVRDKIEIEVDRMQKSAKIISEVDCLSSLARVAIENNYCKPKITNSDNIII 580
Query: 527 QNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH + E +D+ FI ND ID ++ +ITGPN +GKS Y++Q+ALIV ++ IGS
Sbjct: 581 EEGRHPVVEKMIDSGEFISNDINIDTGKNQLLLITGPNMAGKSTYMRQIALIVIMAQIGS 640
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA A++ + D S + + +S+FM+++ +V +L+ AT++SL LLDE G+G
Sbjct: 641 FVPAKNASISVCDKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRG 700
Query: 636 TLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
T T DG+ + I Y + K L TH EL EG K + +K Y +SV E
Sbjct: 701 TSTYDGLSIAWSVIEYICKNSKLKCKTLFATHYHELTKLEG---KIDGVKNYCVSVKEME 757
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
+N IVFL +++ G A SYG+ A LAG+P EV+KRA +L + ++ K E
Sbjct: 758 DN------IVFLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAGEILNSLESKKLKENKCA 811
Query: 754 ENISAQDQQY 763
+ A D +Y
Sbjct: 812 GSEIALDAEY 821
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 287/577 (49%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+K+ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ S ++ +
Sbjct: 271 IQRSKKN-SLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSSYSILVQI 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + +SI L + K+ ++ L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYE- 386
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+FD +E S I + + + + KE G ++++GF +E+D LR I +
Sbjct: 387 -DFDTLEDIHSLIDSSINEDAPVTL--------KECG---IIKDGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L + E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVQYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K ++
Sbjct: 488 NAER--------YVTEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASY 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + I+NGRH + E + FIPNDT +D +
Sbjct: 540 IAILDVLCSFARIAIDNEYVRPNVYLGDKIYIKNGRHPVVEKMIGRGNFIPNDTELDQVE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N +VFL ++V G SYG+H
Sbjct: 720 FATHYHELTELEEKIPG---VKNYRVDVKEEGKN------VVFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K + + E
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKSIRKLRKE 807
>gi|169830744|ref|YP_001716726.1| DNA mismatch repair protein MutS [Candidatus Desulforudis
audaxviator MP104C]
gi|169637588|gb|ACA59094.1| DNA mismatch repair protein MutS [Candidatus Desulforudis
audaxviator MP104C]
Length = 882
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 279/564 (49%), Gaps = 59/564 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++FG+++ VT MG R LR W +P+L +E + RL+A+ +L E LK +
Sbjct: 292 TLFGVLDHTVTAMGGRRLRQWLEQPLLVVEEIRERLDAVGRLAADRIKRETLRERLKGMY 351
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF--EVGISESLREQLRLLNFDIV 322
DI + + + A D A S+ ++ V + E G+ L L DI
Sbjct: 352 DIERLAGRVAYGT--AHARDLLALSSSLEAMFGVRDLLKGEPGL-------LGRLAADID 402
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
A + A + + + + G L+R G+ E+D LR+ E+L
Sbjct: 403 PPAELVDLLKRALADDPPLSLRE---------GGLIRAGYDPEVDRLREASTRAREWL-- 451
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQ---LQGFEFAFSDMD 439
A LE +E I + ++GY +F ++ T Q + + + ++
Sbjct: 452 -AGLE-------AQERERTGIRSL-KVGY-NRVFGYYIEVTRANQHLVPEDYRRRQTLVN 501
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
E Y TP+ +E ++L+ +++++E + +L + + ++ A LD
Sbjct: 502 AER----YITPELKEYESLILGARERMVELEYRLFVELRDRVHSELARIGRSARAVARLD 557
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINII 557
SLA A + NY P++ + I+NGRH + E + F+PND +D+D RI I+
Sbjct: 558 ALASLAEAAVRENYTAPVVDDADRIRIKNGRHPVVERVLGPGRFVPNDVLLDSDCRIMIL 617
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++QVALIV ++ IGSFVPA+AA +G+ D + ++ +S+FM+
Sbjct: 618 TGPNMAGKSTYMRQVALIVLMAQIGSFVPAEAAEIGVVDRIFTRVGAADNLAGGESTFMV 677
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++++ +L QAT SL ++DE G+GT T DG+ L I Y V K L TH E
Sbjct: 678 EMNECRAILEQATPSSLIVMDEVGRGTSTYDGMSLARALIEYL-HRRVGAKTLFSTHYHE 736
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L LP + +T++V + + ++IVFL+R+VPG A SYG+ A LAG+P
Sbjct: 737 LTTLDALPG---VVNHTVTV------AEEGDEIVFLHRVVPGKADRSYGIQVARLAGLPP 787
Query: 730 EVIKRAAYVLEAAQNNKHVERWSH 753
VI RA VLE +N + ERW
Sbjct: 788 AVIVRAREVLERLENGQAAERWKR 811
>gi|376261287|ref|YP_005148007.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
gi|373945281|gb|AEY66202.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
Length = 873
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 191/633 (30%), Positives = 318/633 (50%), Gaps = 82/633 (12%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
++ V ASG LL LE+ + V+ L ++ N+ +L +++ LDA++ L++
Sbjct: 231 DIAVNASGALLKYLESTQKVN-LSHIQNFNS---------YALEEYMILDASSRRNLELT 280
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + S G S+ +++K +T MG RLLR W +P+++ +++ RLNA+
Sbjct: 281 ETMREKSKKG--------SLLWVLDKTMTSMGGRLLRKWIEQPLINHGDISLRLNAVEEL 332
Query: 247 LCSEELMASL--HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ MA + E LK V DI ++ K S D A S+C + ++ + +
Sbjct: 333 --KNKFMARVEARELLKRVYDIERLMGKVILGSV--NCRDLIALKNSMCQIPYIKNLLDG 388
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
+E ++ L D +E + I I IID K G ++++G+
Sbjct: 389 FETEYIKNCYHQL--DSLEDVCNLID----------ISIIDDPPVTIK-EGGIIKDGYNS 435
Query: 365 ELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFEEKL 420
E+D+LR + +++ E + E + +L K F Y ++ Y + EE +
Sbjct: 436 EVDKLRMASIQGKDWIAALEASEREKTGIKNL-KVGFNRVFGYYIEVTKSYFSLVPEEYI 494
Query: 421 DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL-DNLLGDIYHKILDMERAITRDLVS 479
TL + Y TP+ +E+ DN+LG KI+ +E ++ +
Sbjct: 495 RKQTLANCE----------------RYITPELKEIEDNILG-AEEKIVQLEYSLFVQIKD 537
Query: 480 HICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTV 538
I + AE+D SLA VA + Y +P +++ ++I +GRH V+++MT
Sbjct: 538 KIAEQLSRIKSTARALAEIDVLASLAEVADREGYCKPDVSVSDKIEIVDGRHPVVEKMTD 597
Query: 539 DT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
+ F+PNDT +D + R+ IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +GL D
Sbjct: 598 KSGFVPNDTVLDMEEDRLAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAASAKIGLVD 657
Query: 597 --------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
S + + QS+FM+++ +V +L AT +SL +LDE G+GT T DG+ +
Sbjct: 658 RIFTRVGASDDLASGQSTFMVEMSEVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAV 717
Query: 649 INYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
I Y V+ + + + L TH EL EG LP +K Y ++V +D++FL
Sbjct: 718 IEYIVSKEQLGCRTLFATHYHELTELEGKLPG---IKNYCITV------KEKGDDVIFLR 768
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+++ G A SYG+ A LAGVP VI RA +L
Sbjct: 769 KIIRGGADGSYGIQVAKLAGVPHAVIDRAKEIL 801
>gi|331089571|ref|ZP_08338470.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438886|ref|ZP_08618507.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_1_57FAA]
gi|330404939|gb|EGG84477.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017376|gb|EGN47138.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_1_57FAA]
Length = 883
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 219/778 (28%), Positives = 369/778 (47%), Gaps = 113/778 (14%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ R GVS D S V E+ + + L+D + Y+ P I + E
Sbjct: 126 YIMCIVYIADRYGVSVADISTGDYFVTEIPDSAK----LLDEI-YRFSPSEIICN----E 176
Query: 63 SFLSALKRSDGTTE--APTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLN 119
+F + DG + T+ ++S F E +L+ + V+ GL + + C +
Sbjct: 177 AFYMSGVDMDGMKDRLGITIYSLESWYFDDEVCRKKLLEHFEVSSFA-GLGLADYDCGII 235
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S +G LL L LE +++ +++T + + KF+ +D++
Sbjct: 236 S------------AGALLQYL--------LETQKNSLSNLT--HITPYAAGKFMMIDSST 273
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
L++ +T + G S+ +++K T MG R LR + +P++D + R
Sbjct: 274 RRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARTLRKYVEQPLIDKTEIIRR 325
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF---LKSICSLL 296
L+A+ + E L V D+ ++ K S D TAF L+ + +LL
Sbjct: 326 LDAVQELKEQAISREEIREYLSPVYDLERLITKIAYGSA--NPRDLTAFRSSLEMLPALL 383
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
++ + E E L+ L D+ CI + A + I + KE G
Sbjct: 384 YI-------LQEMKAELLKDLAVDLDPLEDLCILVKKAIREDPPIAM------KE---GN 427
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
++ +G+ +E+D+LR+ + ++L ++ + E + +L I Y GY +
Sbjct: 428 IINDGYNEEVDKLRRAKSDGKDWLAKLENDEREKTGIKNLK-------IKYNKVFGYYLE 480
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+ + +++ + +R Y TP+ +EL++++ K+ +E +
Sbjct: 481 VT------NSYKEMVPEYYTRKQTLANAER--YITPELKELEDMILGAEDKLYALEYELY 532
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQ 534
++ I + + K A LD F SLALVA +NNY+RP + + ++DI+ GRH +
Sbjct: 533 SEVRDLIASQIERIQKTAKAVAALDAFASLALVAERNNYVRPKINEKGVIDIKEGRHPVV 592
Query: 535 EMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT 591
E + + FI NDT +D+ RI+IITGPN +GKS Y++Q ALI ++ IGSFVPA +A
Sbjct: 593 ERMIPNEMFISNDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMAQIGSFVPAKSAN 652
Query: 592 VGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIG 643
+GL+D S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+
Sbjct: 653 IGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLS 712
Query: 644 LLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ I Y + K L TH EL EG K + + Y ++V +D
Sbjct: 713 IAWAVIEYISDSRLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV------KEKGDD 763
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQ 759
IVFL ++V G A SYG+ A LAGVP VI RA + VE S E+I+A+
Sbjct: 764 IVFLRKIVKGGADKSYGIQVAKLAGVPELVIGRAKEI---------VEELSDEDITAR 812
>gi|331091141|ref|ZP_08339983.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405363|gb|EGG84899.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
Length = 883
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 307/645 (47%), Gaps = 80/645 (12%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
+I + K++ LD++ L++ +T + G S+ +++K T MG R L
Sbjct: 257 GIISYTTGKYMLLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARTL 308
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA 282
R++ +P+++ E++ +RL+A+ + + E L V D+ ++ K S
Sbjct: 309 RSYVEQPLINKEDILARLDAVGELKDNAIAREEIREYLTPVYDLERLISKITYQSA--NP 366
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAYVYELV 340
D TAF S+ L H+ I S L R L+ D+ E S I E
Sbjct: 367 RDLTAFQSSLAMLPHIKYILSDMTSPLLMSLYRELDTLEDLCELVQSAIKEEPPLAM--- 423
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
KE G ++++G+ E+D+LR E +L E+ + E + K +
Sbjct: 424 ---------KE---GGIIKDGYDAEVDKLRNAKTEGKTWLAELEAEEREKTG--IKNL-- 467
Query: 401 PCIVYIHQIGYLMCI---FEEKLDD--TTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
I Y GY + + ++E + D T + L E Y P+ +EL
Sbjct: 468 -KIKYNKVFGYYLEVTNSYKELVPDYYTRKQTLANAER-------------YIIPRLKEL 513
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++ + K+ +E I + I + K A++D F SLALVA +NNY+R
Sbjct: 514 EDTILGAEDKLYALEYEIYCKIRDKIADEVVRIQKTAKAIAKIDVFASLALVAERNNYVR 573
Query: 516 PILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQV 572
P + + ++DI+NGRH + E + D FI NDT +D+ R++IITGPN +GKS Y++Q
Sbjct: 574 PKINEKGVIDIKNGRHPVVEKMIPNDMFIANDTLLDDKKNRVSIITGPNMAGKSTYMRQT 633
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ IG+FVPA++A VG+ D S + + QS+FM+++ +V +LR AT++
Sbjct: 634 ALIVLMAQIGTFVPAESANVGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATNR 693
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERL 682
SL +LDE G+GT T DG+ + + + + K L TH EL EG K + +
Sbjct: 694 SLLILDEIGRGTSTFDGLSIAWAVVEHISNAKLLGAKTLFATHYHELTELEG---KIDSV 750
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA ++
Sbjct: 751 NNYCIAV------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVILRAKEIVSEL 804
Query: 743 QNNKHVERWSHENISAQDQQYKNAVEK--------MLAFDVLKGD 779
R I Q+ + + +K M FD +K D
Sbjct: 805 SEADITTRVKDIKIQGQESKARTKQKKYDEVDLAQMSLFDTVKDD 849
>gi|153814910|ref|ZP_01967578.1| hypothetical protein RUMTOR_01125 [Ruminococcus torques ATCC 27756]
gi|317500422|ref|ZP_07958646.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|145847941|gb|EDK24859.1| DNA mismatch repair protein MutS [Ruminococcus torques ATCC 27756]
gi|316898177|gb|EFV20224.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
Length = 877
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 219/778 (28%), Positives = 369/778 (47%), Gaps = 113/778 (14%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ R GVS D S V E+ + + L+D + Y+ P I + E
Sbjct: 120 YIMCIVYIADRYGVSVADISTGDYFVTEIPDSAK----LLDEI-YRFSPSEIICN----E 170
Query: 63 SFLSALKRSDGTTE--APTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLN 119
+F + DG + T+ ++S F E +L+ + V+ GL + + C +
Sbjct: 171 AFYMSGVDMDGMKDRLGITIYSLESWYFDDEVCRKKLLEHFEVSSFA-GLGLADYDCGII 229
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S +G LL L LE +++ +++T + + KF+ +D++
Sbjct: 230 S------------AGALLQYL--------LETQKNSLSNLT--HITPYAAGKFMMIDSST 267
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
L++ +T + G S+ +++K T MG R LR + +P++D + R
Sbjct: 268 RRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARTLRKYVEQPLIDKTEIIRR 319
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF---LKSICSLL 296
L+A+ + E L V D+ ++ K S D TAF L+ + +LL
Sbjct: 320 LDAVQELKEQAISREEIREYLSPVYDLERLITKIAYGSA--NPRDLTAFRSSLEMLPALL 377
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
++ + E E L+ L D+ CI + A + I + KE G
Sbjct: 378 YI-------LQEMKAELLKDLAVDLDPLEDLCILVKKAIREDPPIAM------KE---GN 421
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
++ +G+ +E+D+LR+ + ++L ++ + E + +L I Y GY +
Sbjct: 422 IINDGYNEEVDKLRRAKSDGKDWLAKLENDEREKTGIKNLK-------IKYNKVFGYYLE 474
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+ + +++ + +R Y TP+ +EL++++ K+ +E +
Sbjct: 475 VT------NSYKEMVPEYYTRKQTLANAER--YITPELKELEDMILGAEDKLYALEYELY 526
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQ 534
++ I + + K A LD F SLALVA +NNY+RP + + ++DI+ GRH +
Sbjct: 527 SEVRDLIASQIERIQKTAKAVAALDAFASLALVAERNNYVRPKINEKGVIDIKEGRHPVV 586
Query: 535 EMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT 591
E + + FI NDT +D+ RI+IITGPN +GKS Y++Q ALI ++ IGSFVPA +A
Sbjct: 587 ERMIPNEMFISNDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMAQIGSFVPAKSAN 646
Query: 592 VGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIG 643
+GL+D S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+
Sbjct: 647 IGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLS 706
Query: 644 LLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ I Y + K L TH EL EG K + + Y ++V +D
Sbjct: 707 IAWAVIEYISDSRLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV------KEKGDD 757
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQ 759
IVFL ++V G A SYG+ A LAGVP VI RA + VE S E+I+A+
Sbjct: 758 IVFLRKIVKGGADKSYGIQVAKLAGVPELVIGRAKEI---------VEELSDEDITAR 806
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis
OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis
OL]
Length = 863
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/605 (28%), Positives = 294/605 (48%), Gaps = 66/605 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ +L++D L++ ++ I R+K+ S+ G++++ T MG RLL+ W R
Sbjct: 250 IQNYLQIDINTKRNLELTESI-------IQRSKKN-SLLGILDQTKTSMGSRLLKKWIER 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++D+ +N RL+++ S ++ + E L + DI + KF + A D +
Sbjct: 302 PLIDVIEINRRLDSVEQLKSSYSILVQIEELLSRMYDIERLSSKFAYKNV--NAKDLLSL 359
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+SI L + K+ ++ L+E L+ L +Y LV I+
Sbjct: 360 KRSIEVLPALKKLLSSFSAQLLKEIYEGLD-------------TLEDIYALVDSSINEGA 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYI 406
G ++++GF +E+D LR I + E L + E L + +L I Y
Sbjct: 407 PVTLKEGGIIKDGFNEEVDRLRNISKNSKELLVQYEEKERNLTGIKNLR-------IGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + ++ A ++ Y T + ++L++ + K+
Sbjct: 460 KVFGYYIEVTKSNYSLVPDRYIRKQTLANAER--------YVTEELKKLEDEILGADQKL 511
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E + ++ I + + K ++ A LD S A +A N Y+RP + L + I
Sbjct: 512 IELEYQLFCEIRDRIEAQIERIQKTASYIAILDVLCSFARIAIDNEYVRPNVYLGDKIYI 571
Query: 527 QNGRHVLQEMTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+NGRH + E + FIPNDT +D + RI IITGPN +GKS Y++QVALIV ++ +G
Sbjct: 572 KNGRHPVVEKMIGRGNFIPNDTELDQVENRILIITGPNMAGKSTYMRQVALIVIMAQMGC 631
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD A +G+ D S +++ QS+FM+++ +V +L+ AT +SL + DE G+G
Sbjct: 632 FVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIIFDEVGRG 691
Query: 636 TLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
T T DG+ + + Y + K L TH EL E +P +K Y + V
Sbjct: 692 TSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPG---VKNYRVDVKEEG 748
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL----EAAQNNKHVE 749
N ++FL ++V G SYG+H A LAG+P +V+KRA +L EA N K +
Sbjct: 749 KN------VIFLRKIVRGGCDSSYGIHVARLAGIPEDVLKRAEEILKQLEEADINRKSIR 802
Query: 750 RWSHE 754
+ E
Sbjct: 803 KLRRE 807
>gi|433654964|ref|YP_007298672.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293153|gb|AGB18975.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 857
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 171/593 (28%), Positives = 295/593 (49%), Gaps = 62/593 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD + L+I Q+ P+ +++G ++ ++++ VTPMG RLL+ W P
Sbjct: 261 NSFMLLDNNTIKNLEIVQS---PNR---NNSRDG-TLLSVLDQTVTPMGGRLLKRWIEEP 313
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY---TASDWT 286
++D+E +N RL+++ + + L LK + D+ + S +Y A D
Sbjct: 314 LIDIEKINLRLDSVDELFNDFKGRSDLRNALKGIYDLERL-----SSKLVYQNINAKDLL 368
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+ SI L + + S L+E L D ++ + +L+ I
Sbjct: 369 SIKVSIERLPKIKDLISKYNSIYLKEIF--LKLDTLQD-----------ICDLIEKSIKD 415
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+ S G ++++GF +DELR+ + + +LEL + + + Y
Sbjct: 416 DPSTSVKEGNIIKDGFDKNVDELRKAATNGKSW---ITNLELNEKERTGIKTL--KVGYN 470
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + + ++ A ++ Y TP+ +E++ + K+
Sbjct: 471 KVFGYFIEVSKSYISSVPQNYIRKQTLANAER--------YITPELKEIEEKILGAETKL 522
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E I + I + + + A LD SLA+VA NNY++PI+ + I
Sbjct: 523 VELEYEIFNSIREQIKNEINRIQMTSKYIAVLDVLTSLAMVAESNNYVKPIVNDGDRILI 582
Query: 527 QNGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
++GRH V++ + D+FI ND ID I IITGPN +GKS Y++QVALIV ++ +GSFV
Sbjct: 583 KDGRHPVIETIVDDSFISNDIEIDEKKPIMIITGPNMAGKSTYMRQVALIVLMAQVGSFV 642
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A +G+ D S + + QS+FM+++++V ++L AT +SL +LDE G+GT
Sbjct: 643 PASYAEIGIVDRIFTRVGASDDLFSGQSTFMVEMNEVSVILNSATQKSLIILDEVGRGTS 702
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
T DG+ + + Y + + K + TH EL E L +K Y +SV E N
Sbjct: 703 TYDGMSIACAILEY-IHDKIKAKTMFATHYHELTKLEDQL---NGIKNYNISV--DETN- 755
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN-NKHV 748
++I+FL +++PG A SYG+ A LAG+P +VI A +L + +N N+ V
Sbjct: 756 ---DEIIFLRKIIPGSADKSYGIQVAKLAGLPNDVIDNAKKILNSLENSNREV 805
>gi|188586122|ref|YP_001917667.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350809|gb|ACB85079.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 869
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 176/604 (29%), Positives = 302/604 (50%), Gaps = 76/604 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S +L +D+ + L++ +T + + KEG S+ +++K +T MG R+LRNW
Sbjct: 267 STESYLVMDSNTRKNLELCETIRQ-------QRKEG-SLLWVLDKTLTAMGGRMLRNWIQ 318
Query: 228 RPILDLENLNSRLNAISFFLC---SEELMASLHETLKYVKDIPHILKKF----NSPSFIY 280
P+L+++ +N RL A+ FFL EEL TLK V D+ +L K +P +
Sbjct: 319 HPLLNVDAINHRLQAVEFFLNFMYREELA----RTLKNVYDLERVLGKIIYDRATPKDLI 374
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL-AYVYEL 339
S+ L + LL + E G L ++L L D+VE S I + A V E
Sbjct: 375 ALSNSLEILPDVKDLLKND---EDGTLNDLMDRLPDL-MDLVELINSAIVPDPPATVKE- 429
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
G ++++GF +ELD+++ + E+ +A+LE + +
Sbjct: 430 ---------------GGIIKDGFDEELDKIKDLSRGGKEW---IANLEAKEKERTGIKSL 471
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + ++ LD + ++ ++ + TP +E ++ +
Sbjct: 472 --KVRYNKVFGYYIEVTKKNLDLVPEDYIRKQTLVNAER--------FVTPDLKEYEDKI 521
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
++ D+E I + + S + + +A AELDC+ SLA A + +++ P +
Sbjct: 522 LKAEEEMTDLEYKIFQKIRSEVISRIKEIQEAAKILAELDCYRSLAASAAEYDFVPPQVD 581
Query: 520 LEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIV 576
++DI+ GRH + E + F+PNDT +DN +I +ITGPN +GKS Y++QVALI+
Sbjct: 582 NSDIIDIKEGRHPVVERVSQEEPFVPNDTYLDNGTEQIALITGPNMAGKSTYMRQVALII 641
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GS+VPA +A +G+ D + + + QS+FM+++++V +L ATS S +
Sbjct: 642 VMAQMGSYVPATSARIGIVDKIFTRVGAADDLVSGQSTFMVEMNEVANILNNATSNSFVI 701
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DGI + + Y D V K L TH EL+ + R+ Y++
Sbjct: 702 LDEIGRGTSTFDGISIARAVVEYLHQEDKVACKTLFATHFHELIE--LADEFARVVNYSV 759
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQN 744
SV + +D++FL + G SYG+ A LAG+P +VI RA + LE+ +
Sbjct: 760 SV------KEEGDDMIFLREIEKGGTDRSYGVQVARLAGIPRKVIGRAKEILSYLESRET 813
Query: 745 NKHV 748
N +
Sbjct: 814 NTEI 817
>gi|294675138|ref|YP_003575754.1| DNA mismatch repair protein MutS [Prevotella ruminicola 23]
gi|294472318|gb|ADE81707.1| DNA mismatch repair protein MutS [Prevotella ruminicola 23]
Length = 874
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 299/608 (49%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +P ++G S+ +++K V+PMG R
Sbjct: 256 ITSISRIEEDKYVRLDKFTIRSLELV----YPMQ------EDGKSLLDVIDKTVSPMGGR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D + +N RL+ + ++ E + + + + D+ I+ K SP
Sbjct: 306 LLRRWLVFPLKDEKPINERLDVVEYYYREPEFRECIDDQIHRIGDLERIISKAAVGRVSP 365
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ TA +K+ C + +G +L E LR D +EK +L
Sbjct: 366 REVVQLKTALQAIQPIKTACLYAKNPTLNRIGEQLNLCESLR----DRIEKEIQNDPPQL 421
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++R+G ELDELR I ++L ++ E
Sbjct: 422 V------------------AKGGVIRDGVNAELDELRSIAYSGKDYLLKIQERE------ 457
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E + I Y + GY + ++ +T EQ+ E+ + +R Y T +
Sbjct: 458 -AQETGIQSLKIGYNNVFGYYL-----EVRNTYKEQVPP-EWVRKQTLAQAER--YITQE 508
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DL+ + F + N A LDC LS A A +N
Sbjct: 509 LKEYEEKILGAEDKILSLEGKLFNDLIMSMQEFIPQIQINANIIARLDCLLSFAKAAEEN 568
Query: 512 NYMRPILTLEPLLDIQNGRH--VLQEMTV-DTFIPNDTRIDND-GRINIITGPNYSGKSI 567
Y+RP++ ++DI+ GRH + QE+ + + ++PND +DN+ +I IITGPN +GKS
Sbjct: 569 KYIRPVIDSSEVIDIRQGRHPVIEQELPLGEYYVPNDILLDNERQQIIIITGPNMAGKSA 628
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALIV L+ IG FVPA+AA +GL D S +++ +S+FM+++ + +L
Sbjct: 629 LLRQTALIVLLAQIGCFVPAEAARIGLVDKIFTRVGASDNISLGESTFMVEMTEASNILN 688
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y P+ L TH E LNE + K
Sbjct: 689 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYLHENAKGHPRTLFATHYHE-LNE--MEK 745
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
+ R+K Y +SV + ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 746 NFSRIKNYNVSVKEVDGK------VIFLRKLERGGSEHSFGIHVAEIAGMPRSIVKRANV 799
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 800 ILKQLESD 807
>gi|303248020|ref|ZP_07334286.1| DNA mismatch repair protein MutS [Desulfovibrio fructosovorans JJ]
gi|302490577|gb|EFL50482.1| DNA mismatch repair protein MutS [Desulfovibrio fructosovorans JJ]
Length = 879
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 197/670 (29%), Positives = 309/670 (46%), Gaps = 105/670 (15%)
Query: 120 SMMDMGSEVQ-VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+ +D+G + Q VRA G LL L + ++ D G+ + V+L + + +D
Sbjct: 218 AALDVGDKPQLVRAMGALLTYLASNQMRDI------GH----LAPFKPVNLGRHMLIDEV 267
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
L+IF+ GR +G +++ ++++ VTPMG RLL +W +P LDL +
Sbjct: 268 TERNLEIFRRLD-------GRKGQG-TLWHVLDRTVTPMGGRLLESWLRQPWLDLAPILE 319
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLL 296
+A+++ EE +L E L V D L++ + F+ A+ D+TA +S+ +L
Sbjct: 320 TQDAVAWLAGDEERRRALREALAGVYD----LERLTTRIFLNRAAPRDFTALRQSLAALP 375
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ + L +D ++ A ++ L +++ G
Sbjct: 376 RLRALAAASAEPPKAATDLLSGWDDLDDACELLSRALVDSPPVLVT-----------EGG 424
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHLCKEMFVPCIVYIHQIGYLMC 414
L + G+ +LDEL ++ E E + ++ + E +LP L ++GY
Sbjct: 425 LFKPGYNPDLDELMELTEHGEERIRQLLAEEREGCKLPKL-------------KLGY--- 468
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----------YHTPKTRELDNLLGDIY 463
++ G+ F S G F Y TP+ +EL+ L
Sbjct: 469 -----------NRVFGYYFELSKSAGYPPEHFERRQTLANCERYVTPRLKELEEKLMAAG 517
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K +E + L HI D ++ A LD + LA A N++ RP L P
Sbjct: 518 EKRKTLEYNLFVALRDHIAALRDRIMDTAARVARLDVWQGLAEAAVANDWTRP--ELRPD 575
Query: 524 LDIQ--NGRHVLQEMT--VDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLS 579
LDI+ GRH + E V +IPND +D R+ +ITGPN +GKS ++Q A+I L+
Sbjct: 576 LDIRIRAGRHPVIEAVQGVGNYIPNDVTLDEATRVLLITGPNMAGKSTVLRQTAIIALLA 635
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +GL D S ++ QS+FM+++ + +LRQA +SL +LDE
Sbjct: 636 QIGSFVPATKAEIGLVDRVFCRVGASDNLAQGQSTFMVEMMETARILRQAGRRSLVILDE 695
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKV--LVCTHLTELLN-EGCLPKSERLKFYTMS 688
G+GT T DG+ L + D V L TH EL EG LP RL+ ++
Sbjct: 696 IGRGTATFDGLALAWAVVEDLCGRDDGQGVRTLFATHYHELTALEGRLP---RLRNANIA 752
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK-- 746
V + DIVFL RL+PG A SYG+ A LAGVP V++RA +LE + ++
Sbjct: 753 VKEWKG------DIVFLRRLLPGPADRSYGVEVARLAGVPRNVVRRARQLLEELERSRDP 806
Query: 747 -HVERWSHEN 755
H R S E
Sbjct: 807 AHAARGSRER 816
>gi|157364284|ref|YP_001471051.1| DNA mismatch repair protein MutS [Thermotoga lettingae TMO]
gi|167012384|sp|A8F753.1|MUTS_THELT RecName: Full=DNA mismatch repair protein MutS
gi|157314888|gb|ABV33987.1| DNA mismatch repair protein MutS [Thermotoga lettingae TMO]
Length = 811
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 278/573 (48%), Gaps = 66/573 (11%)
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
H+ + ++G ++F ++N T MG RLL+NW L+P+ DL +N RL+ + F+ L+
Sbjct: 261 HLSLVGGEKGKNLFDVLNHTKTSMGSRLLKNWILQPLRDLYEINKRLDKVQAFVEDSILL 320
Query: 254 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS------ICSLLHVNKIF-EVGI 306
+ E L+ V+DI I + N + D A + I +L N+ F E +
Sbjct: 321 NEIREYLQAVRDIQRIANRINYGK--ASVKDLVALRSTLQVCPYIKEVLLTNEAFPEAAM 378
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
+ L + +LN I E+ +S I G G +++EG+ ++L
Sbjct: 379 VDCLHDICEILNDAIKEEPSSVI-----------------------GEGKVIKEGYDEQL 415
Query: 367 DELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
D+LR++ EFL E + +P+L + Y GY + I + L
Sbjct: 416 DQLRELVYHSQEFLNNFEQRERDRTGIPNLR-------VGYNSVFGYYIEITKSHLSKIP 468
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
++ ++ + T + +E + + + E+ I ++ + +
Sbjct: 469 PNYVRKQTLVNAER--------FITDELKEFEQKMLTAKENLERREKEIYDEICASLSSK 520
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPN 544
+++ F A++D +LA VA + Y +P + + L ++N RH + E VDTF+PN
Sbjct: 521 VGLIIELAEFLAQIDVLSTLAYVAIRYGYTKPSFSNDGKLLLRNSRHPVVERLVDTFVPN 580
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
D +D I+TGPN SGKS +I+QVAL+ ++ +GSFVPAD A + + D
Sbjct: 581 DLEMDRTKNFIILTGPNMSGKSTFIRQVALVSIMAQMGSFVPADEAILPVFDRIFAKMGI 640
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
+ + +S+F+I++++V ++ QAT SL LLDE G+GT T DGI + ++ ++
Sbjct: 641 RDDIASGKSTFLIEMNEVAKIVYQATENSLILLDEVGRGTSTFDGIS-IAWAVSEYLQNQ 699
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
+ K + TH TEL +E K Y V + + ++FL+R+V G A S
Sbjct: 700 ISCKCIFATHFTEL--------TELAKMYDGIVNKTVQVIEEKNQVIFLHRVVDGIADRS 751
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
YG+ A +AG+P E+I+RA VL+ N +E
Sbjct: 752 YGIEVAGIAGLPGEIIQRAREVLDVIANKSELE 784
>gi|390335922|ref|XP_791267.2| PREDICTED: mutS protein homolog 5-like [Strongylocentrotus
purpuratus]
Length = 681
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 186/328 (56%), Gaps = 27/328 (8%)
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD LGD + I D E I L + I L S +++AAELDC A + NY+
Sbjct: 338 LDVKLGDTHCDITDHETQIMHQLQNDILLRSQVFYAIMDYAAELDCG-----AAKEGNYV 392
Query: 515 RPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVA 573
RP LT LDI GRH LQE+ V F+PN+ D RI +ITGPN SGKSIY+KQV
Sbjct: 393 RPELTHGSQLDIIGGRHPLQELCVTPFVPNNAHFGGDHTRIKVITGPNASGKSIYLKQVG 452
Query: 574 LIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LI F++ IGSFVPA+ A++G+ D + ++ S+FMIDL+Q+ +R AT S
Sbjct: 453 LIAFMALIGSFVPAEKASIGMLDGIYTRVHTQESVSVGLSTFMIDLNQLSAAVRDATKNS 512
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYF----VTCDVPPKVLVCTHLTELLNEGCLPKSER 681
L ++DEFG+ T T DG+ LL I ++ C P ++V TH ++ EG LP S++
Sbjct: 513 LVIVDEFGRSTDTVDGLSLLVACIKHWEGKGSDC---PNLMVSTHFHAIVREGLLPASQQ 569
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
L + TM VL EN+ ++VFLY L GHA S+ H AL AG+P E++KR V +
Sbjct: 570 LSYQTMEVL--ENDG----ELVFLYELTDGHANYSHASHIALTAGLPEELVKRGTKVSKL 623
Query: 742 AQNNKHVERWSHENISAQDQQYKNAVEK 769
+ N+ + R + Q +YK + K
Sbjct: 624 LRENQPILRVDSSSSETQFDRYKEILAK 651
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 66/314 (21%)
Query: 128 VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQ 187
V +RA+GGLL LE +RI LE+ + + + I + SL+ + +D + +LQIFQ
Sbjct: 2 VMIRATGGLLKFLEKKRIGVELERSDVSSPVLNIKTF---SLSDMVSIDVNTYSSLQIFQ 58
Query: 188 TDKHPS--HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
+ HPS G AKEG S+FG N WFLRP +L+ L R A+SF
Sbjct: 59 KESHPSVYKSGGSGAKEGLSLFG--NAL-----------WFLRPSRNLDLLRERQEAVSF 105
Query: 246 FLCSE--ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
FL + E+ SL LK VK++P I K+ + +DW + K+ +
Sbjct: 106 FLNPKNAEVTGSLQNCLKNVKNVPRIFKQMQQAQ--ASMTDWQSLYKTAYN--------A 155
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
+ I+E R Q + I +K T ++ V + LVR
Sbjct: 156 IDIAEICRAQRA--DVPIFKKITEAFTDDIHQVAAAI--------------SQLVR---- 195
Query: 364 DELDELRQIYEELPEFLEEVASLELVQL-PHL--CKEMFVPCIVYIHQIGYLMCI-FEEK 419
++ Y LP + VA EL +L PH+ C I+Y+ Q+GYL+ + +
Sbjct: 196 ------KRTYSTLPSLMTTVAREELDRLGPHIEECS------IIYVPQLGYLLALPCTQH 243
Query: 420 LDDTTLEQLQGFEF 433
+ +T ++G +F
Sbjct: 244 MTETKDFTIEGLQF 257
>gi|187779607|ref|ZP_02996080.1| hypothetical protein CLOSPO_03203 [Clostridium sporogenes ATCC
15579]
gi|187773232|gb|EDU37034.1| DNA mismatch repair protein MutS [Clostridium sporogenes ATCC
15579]
Length = 931
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 299/620 (48%), Gaps = 63/620 (10%)
Query: 160 TIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGR 219
I+ + S+ +L +D + L+I + + + G S+ +++K T MG
Sbjct: 248 NINKIDYYSIVDYLTIDVNSRRNLEITENLREKTKKG--------SLLWVLDKTNTAMGG 299
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI 279
R LR W +P+++ + RLNA+ L + L L E L+ + DI I+ K S S
Sbjct: 300 RQLRRWIEQPLINKNPIEDRLNAVEELLNNISLQEDLKEDLRSIYDIERIVGKVASKSV- 358
Query: 280 YTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
A + + SI + ++ +E L D+ I T L ++EL
Sbjct: 359 -NAKELISLKCSIGKIPYI------------KEYLANFKSDLFLNMEQNIDT-LEDIHEL 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ + + S G +++EGF +E+D LR+ ++ +ASLE + +
Sbjct: 405 LDKSLLDSPSLSVKEGNIIKEGFNEEVDSLREAKSNGKKW---IASLEQKEKEETGIKSL 461
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + I + L + + +R Y TP+ +E++ +
Sbjct: 462 K--VSYNKVFGYFIEITK-----ANLSSVPEGRYIRKQTLANAER--YITPELKEMEEKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++D+E + + I D + K +++DC SLA VA +NNY++P +
Sbjct: 513 LGAEEKLIDIEYKLFTKIRDFIEENIDRMQKTARIISDIDCLCSLATVALENNYIKPNIN 572
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ + I+ GRH + E + FI ND+ ID + ++ +ITGPN +GKS Y++QVALI
Sbjct: 573 AKDEILIEEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALIT 632
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA A + + D S + A +S+FM+++ +V +L+ ATS+SL L
Sbjct: 633 IMAQIGSFVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVL 692
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
LDE G+GT T DG+ + I Y ++ K L TH EL E +K Y++
Sbjct: 693 LDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK--LEDNIEGVKNYSV 750
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV EN +IVFL +++ G A SYG+ A LAG+P+ VI RA +L+ H
Sbjct: 751 SVSELEN------EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQ------H 798
Query: 748 VERWSHENI--SAQDQQYKN 765
+E + EN ++YKN
Sbjct: 799 IEGDTEENSLNITTSREYKN 818
>gi|146297052|ref|YP_001180823.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046026|sp|A4XL47.1|MUTS_CALS8 RecName: Full=DNA mismatch repair protein MutS
gi|145410628|gb|ABP67632.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 863
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 293/604 (48%), Gaps = 64/604 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ +L++D + L++ ++ I R+K+ S+FG++++ T MG RL++ W R
Sbjct: 250 VQNYLQIDLSTKRNLELTES-------IIARSKKN-SLFGILDQAKTSMGSRLIKKWLER 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++D+ +N RL+A+ + L+ + L+ + DI + KF S A D +
Sbjct: 302 PLIDVVEINRRLDAVEELYNNFPLLMQIEGLLEGIYDIERLSSKFAYKSI--NAKDLLSL 359
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
KSI L + ++ S L+E L+ L VY L+ I+ +
Sbjct: 360 KKSIEVLPRLKELLGEFKSPLLKELYNELD-------------TLEDVYSLIDSSINEDA 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYI 406
G ++++GF D +D LR I + E L + E L + +L I Y
Sbjct: 407 PVGLKEGGIIKDGFNDHVDRLRNISKNSKELLIQYEEKERNLTGIKNLK-------IGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + ++ A ++ Y T + ++L++ + + K+
Sbjct: 460 KVFGYYIEVTKSNYSLVPERYIRKQTLANAER--------YVTEELKKLEDEIINAEQKL 511
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E + + I + + K + A +D S A +A N Y +PI+ L + I
Sbjct: 512 VELEYELFCQIRDKIESQIERIQKTASCIAIIDALCSFAHIAIDNRYTKPIVYLGDRIYI 571
Query: 527 QNGRHVLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+NGRH + E + F+PNDT +DND R+ IITGPN +GKS Y++QVALIV ++ +G
Sbjct: 572 KNGRHPVVEKMIGYSNFVPNDTELDNDQNRVLIITGPNMAGKSTYMRQVALIVIMAQMGC 631
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA+ A +G+ D S +++ QS+FM+++ +V +L+ AT +SL + DE G+G
Sbjct: 632 FVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANILKNATPKSLIIFDEVGRG 691
Query: 636 TLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ + + + + K L TH EL K +K Y + V
Sbjct: 692 TSTYDGLSIAWAVLEFVADKSKIGAKTLFATHYHELTE--LEEKISGVKNYRVDVKEEGK 749
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL----EAAQNNKHVER 750
N I+FL ++V G SYG+H A LAG+P EV++RA +L EA N K +R
Sbjct: 750 N------IIFLRKIVRGGCDSSYGIHVARLAGIPEEVLQRAEQILKKLEEADINRKEAKR 803
Query: 751 WSHE 754
E
Sbjct: 804 LRKE 807
>gi|291538969|emb|CBL12080.1| DNA mismatch repair protein MutS [Roseburia intestinalis XB6B4]
Length = 892
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 216/762 (28%), Positives = 358/762 (46%), Gaps = 100/762 (13%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ CI++ + G+S D S V EV +++ LID + A +II +E
Sbjct: 137 YIMCIVYLADKYGISLADISTGDYFVTEV----DTERKLIDEINKFAPSEIIC----NES 188
Query: 63 SFLSALKRSDGTTE-APTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLNS 120
++S + SD V +++ FS E A + L + +V ++ GL + + C
Sbjct: 189 FYMSGVDLSDMKNRLGIAVYSLEAWYFSDETAENTLKEHFKVQSLE-GLGLSDYAC---- 243
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAH 180
A+G LL R + ++ + GN S ++ S K++ +D++
Sbjct: 244 --------GTIAAGALL------RYLYETQKNDLGNLS----AIHPYSTGKYMIIDSSTR 285
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
L++ +T + G S+ +++K T MG R LR + +P++D + R
Sbjct: 286 RNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRAYVEQPLIDKTEIELRQ 337
Query: 241 NAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
AI + EEL L+ + I + + +P D AF SI L
Sbjct: 338 EAIGELNDHVITREELREYLNPIYDLERLITRVTYRTANPR------DLIAFKNSISMLP 391
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ + + E L+ + DI C + + + E I + + G
Sbjct: 392 PIKSLLD----EFDGALLKNIQNDIDAMEELCSLVDRSIMEEPPISVRE---------GG 438
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF 416
L++EG+ +++D+ R E +L E+ + E + K + I Y GY + +
Sbjct: 439 LIKEGYNEDVDKYRNAKTEGKTWLAELEAKEREKTG--IKNL---KIKYNKVFGYYLEVT 493
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
+ + L F +R Y TP+ +EL++++ K++ +E + +
Sbjct: 494 ------NSYKDLVPDYFTRKQTLANAER--YITPELKELEDMILGAEDKLVSLEYDLFCE 545
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQE 535
+ + I + + A LD F+SLA+VA QNNY RP +T ++DI+ GRH V+++
Sbjct: 546 VRNKIAEEVVRIQRTAKAIANLDVFVSLAVVADQNNYCRPKMTNSGVIDIKGGRHPVVEK 605
Query: 536 M-TVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
M T D FI NDT +DN + RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +
Sbjct: 606 MITNDMFIDNDTYLDNGNNRIAIITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKIS 665
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
+ D S + + QS+FM+++++V +LR ATS SL +LDE G+GT T DG+ +
Sbjct: 666 IVDRIFTRVGASDDLASGQSTFMVEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIA 725
Query: 646 GGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
+ + + K L TH EL EG L + Y ++V +DIV
Sbjct: 726 WAVVEHISNPRLLGAKTLFATHYHELTELEGKL---NNVHNYCIAV------KEKGDDIV 776
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
FL ++V G A SYG+ A LAGVP VI+RA ++E N
Sbjct: 777 FLRKIVQGGADKSYGIQVAKLAGVPDSVIERAKEIVEELSAN 818
>gi|337287987|ref|YP_004627459.1| DNA mismatch repair protein mutS [Thermodesulfobacterium sp. OPB45]
gi|334901725|gb|AEH22531.1| DNA mismatch repair protein mutS [Thermodesulfobacterium geofontis
OPF15]
Length = 865
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 174/594 (29%), Positives = 284/594 (47%), Gaps = 83/594 (13%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
FL LD + L++ + + E +S+F +++K TPMG RLL+ W L P+
Sbjct: 260 FLFLDESTKRNLELIR--------NLWDGSEKYSLFWVLDKTQTPMGARLLKEWILYPLK 311
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D++ + R + FF+ ++ L L + L+ + D+ L +
Sbjct: 312 DIKKIQERQEVVKFFVENKTLREELKKILRKISDLER--------------------LST 351
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASCI-----------TTELAYVYE 338
C+L N E+G+ LRE L+ L DI+EK + + +YE
Sbjct: 352 RCALKLANPK-EMGL---LRESLKYLPEIKDILEKENPLFFPKKLEELLKAIEDFSELYE 407
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCK 396
L+ + + G ++++G ELDEL + E +L E+ E + +P+L
Sbjct: 408 LLNAWLVEDPPTTLKEGGIIKKGVSQELDELLDLKENAVYYLSELEKREKEKTGIPNLR- 466
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
I Y GY + + L+ F T + TP+ +EL+
Sbjct: 467 ------IGYNKVFGYYF--------EVSKSYLKRVPVYFERKQTLTNVERFVTPELKELE 512
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
N + KI ++E + +L + L+ + L AELD FLSLA VA +N+Y P
Sbjct: 513 NKILSSEEKIRNLEYELFLELREKVALYKEKLKTTAKALAELDVFLSLASVAIENDYTMP 572
Query: 517 ILTLEPLLDIQNGRH-VLQEMT-VDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVA 573
+T EP+ ++ GRH VL+++ + F+PN ++ D + I+TGPN GKS +++Q A
Sbjct: 573 EITEEPIFIVEEGRHPVLEQIQGKEKFVPNSLEMNKEDATVLIVTGPNMGGKSTFLRQNA 632
Query: 574 LIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LI ++ +GSFVPA +A VG+ D + +S+FM+++ + +L+ ATS+S
Sbjct: 633 LIAIMAQMGSFVPAKSAKVGIFDKIFSRIGAGDELIKGRSTFMVEMSECAYILKNATSKS 692
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L +LDE G+GT T DG+ L V L+ TH EL L +K Y
Sbjct: 693 LVILDEVGRGTSTFDGMSLAWAIAENLYKKRV--FTLLATHYIELTELAKLYSG--IKNY 748
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++V E N +++FLY+++PG A SYG+ A LAG+P EV+ RA +L
Sbjct: 749 RVTV--KEWNG----EVIFLYKVLPGVANQSYGIEVAKLAGIPQEVVDRAKEIL 796
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 168/591 (28%), Positives = 288/591 (48%), Gaps = 67/591 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++FL LD+T + L++F+ + +G +E +++F +N CVTPMG RLL+ W RP
Sbjct: 242 DRFLILDSTTLKNLEVFK-----NFLG----EERYTLFFTINACVTPMGSRLLKRWMQRP 292
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ +++ + R +A+ + ++ S+ + L ++KD+ I + + D A
Sbjct: 293 LKNVDEIEKRQDAVEELTKKQMMLESIRDVLSHIKDLERIKTRISLGR--ARPKDLIALK 350
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+ + + FE I E++ L K I +A Y + G+I
Sbjct: 351 EGLKYAQDLKMNFESKILREESEKIEGLG-----KIVDLIERSIAGDYPIGDGVI----- 400
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G+ ELD LR + + + ++ E + K + I Y +
Sbjct: 401 ---------KRGYSRELDSLRDLTLHAQDLIGKMEERERRRTG--IKSL---KIGYNDVM 446
Query: 410 GYLMCIFEEKLDDTT--LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + L ++ Q + + + E K L Y +E KI
Sbjct: 447 GYYIEVSKANLSKVPDHYKRKQTLKNSERFITDELKDLEYRILSAKE----------KIN 496
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
D+E+A+ +++ + + + + A +D SLA VA + NY RPI+ + I+
Sbjct: 497 DIEQALYEEIIEKLKGETSRIARVAEAIAHIDTIQSLAKVALEWNYTRPIVDESMDIAIK 556
Query: 528 NGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
NGRH + E D F+PNDT I + R ++TGPN +GKS Y++QVALI L+ +GSFVPA
Sbjct: 557 NGRHPVVERYTD-FVPNDTNISGEARFIMLTGPNMAGKSTYMRQVALITILAQMGSFVPA 615
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
D A +G+ D S +T +S+FM+++ ++ +L AT +SL LLDE G+GT T
Sbjct: 616 DYAKIGVVDRIYTRVGASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGTSTY 675
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + +I + + + + TH L+ E L E ++ Y ++V +
Sbjct: 676 DGLA-IAWSITEHIHNKIKARTIFATHYHHLIELENVL---ENVRNYHIAVKETPDG--- 728
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+VF+ +++PG SYG+ A LAGVP +V+KRA VLE + K +E
Sbjct: 729 ---LVFVRKVMPGGMSKSYGIEVAKLAGVPEDVVKRAKNVLEMIEEEKVIE 776
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor
hydrothermalis 108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
hydrothermalis 108]
Length = 863
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 284/577 (49%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+K+ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ + + +
Sbjct: 271 IQRSKKN-SLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEELKSNYSTLVQV 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + +SI L + K+ ++ L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYEG 387
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ L +Y LV I+ + G ++++GF +E+D LR I +
Sbjct: 388 LD-------------TLEDIYALVDNSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L + E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVQYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K ++
Sbjct: 488 NAER--------YITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASY 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + I+NGRH + E + FIPNDT +D +
Sbjct: 540 IAILDVLCSFARIAIDNEYVRPNVYLGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIVFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N I+FL ++V G SYG+H
Sbjct: 720 FATHYHELTELEERIPG---VKNYRVDVKEEGKN------IIFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K++ + E
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKE 807
>gi|313114064|ref|ZP_07799616.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623473|gb|EFQ06876.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 871
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 309/659 (46%), Gaps = 114/659 (17%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ +VI + +F++L L++ +T + GR K G ++ +++K T MG+R
Sbjct: 258 LKTVITYNKAQFMRLSPVTRANLELTETLR-------GREKRG-TLLWVLDKTSTSMGKR 309
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSP 276
+LR+W +P++ +N RLNA+ + L E L Y+ D+ ++ + +P
Sbjct: 310 MLRSWIEQPLISSALINHRLNAVESLVKQTMARGDLTEELGYIADMERLMTRAVYGSATP 369
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
IYT L C L LR Q A +C ELA
Sbjct: 370 KEIYT-------LAQTCDRL-----------PGLRRQ-----------AEACGCPELA-- 398
Query: 337 YELVIGIIDVNRSKEKGY-------------GTLVREGFCDELDELRQIYEELPEFLEEV 383
EL + I + K + Y G ++ +G+ E+DELR I + L ++
Sbjct: 399 -ELAVQIDPLEDIKARIYAAVDPEAPSTLKDGGVIAKGYHAEVDELRSIRDNTKGVLAQL 457
Query: 384 ASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDM 438
+ L +E +P I Y H GY + + ++ + +T + + +
Sbjct: 458 EA-------RLRQETGIPKLKIGYNHVFGYFIEVSNSYKSMVPETYIRKQ-------TLT 503
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
GE Y T + +EL++ + + +++ +E + +L+ I D + + N A+L
Sbjct: 504 SGER----YITQELKELESKILGAHERLITLEHRLFSELLESISAQLDRIQRTANAVAQL 559
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRID-NDGRIN 555
D +LA VA +NNY RPI+ L I GRH V Q + F+PNDT ++ R
Sbjct: 560 DVLTALAQVAAENNYCRPIVDDSDELTITEGRHPVVEQMLKGSLFVPNDTTLNCGADRCL 619
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS Y++Q ALI ++ IGSFVPA + VG+ D S ++A QS+F
Sbjct: 620 IITGPNMAGKSTYMRQNALIALMAQIGSFVPASSCHVGVVDAIFTRIGASDDLSAGQSTF 679
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC--- 664
M+++ +V +L+ AT++SL +LDE G+GT T DG+ + + + P K L C
Sbjct: 680 MVEMTEVAEILKNATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIAD---PAKGLGCKTL 736
Query: 665 --THLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL EG + + +K Y ++V + EDI FL R+V G A SYG+
Sbjct: 737 FATHYHELTELEGGV---DGVKNYNIAVKK------RGEDITFLRRIVRGPADDSYGIEV 787
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAV-----EKMLAFDV 775
A LAG+P V +RA VL A + + + A + AV +K+ A DV
Sbjct: 788 AKLAGLPGSVTRRAHEVLRALEATAPKNKVEQMDFDALQEYNSPAVPSEMMDKLEALDV 846
>gi|153853167|ref|ZP_01994576.1| hypothetical protein DORLON_00561 [Dorea longicatena DSM 13814]
gi|149753953|gb|EDM63884.1| DNA mismatch repair protein MutS [Dorea longicatena DSM 13814]
Length = 876
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 319/677 (47%), Gaps = 89/677 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G L+ L V+T ++ S + +TI + K++ LD++ L++ +T
Sbjct: 228 VIAAGALMQYL-----VETQKRDLSHISHLTI-----YAAGKYMLLDSSTRRNLELCETL 277
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ G S+ +++K T MG R LR + +P++D + RL+A+ + +
Sbjct: 278 RDKQKRG--------SLLWVLDKTKTAMGARTLRKYIEQPLIDKNAIEKRLDAVDELMKN 329
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
+ E L V D+ ++ K S D AF S+ L H+ I +
Sbjct: 330 AISREEIREYLSPVYDLERLVCKITYQSA--NPRDLIAFQTSLAMLPHIKCILSDMQTPL 387
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L+E L D +E ++ + + + KE G ++++G+ E+D+L
Sbjct: 388 LKELYEEL--DTLEDLCKLVSDSIREDPPIAM--------KE---GGIIKDGYNAEVDKL 434
Query: 370 RQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQ 427
R + ++L E E + +L I Y GY LE
Sbjct: 435 RNAKSDGKDWLAKLETDEREKTGIKNLR-------IKYNKVFGYY------------LEV 475
Query: 428 LQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
F+ D + L Y P+ +EL++ + K+ +E + ++ I
Sbjct: 476 TNSFKDLVPDYYTRKQTLANAERYIIPELKELEDTILGAEDKLYALEYQLYSEVRDTIGK 535
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTF 541
+ K A+LD F SLALVA QNNY+RP + + L+DI++GRH + E + D F
Sbjct: 536 EVVRIQKTAKAIAKLDAFASLALVAEQNNYVRPKMNDKGLIDIKDGRHPVVEKMISNDMF 595
Query: 542 IPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
I NDT + D RI+IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +G+ D
Sbjct: 596 ICNDTYLNDKKDRISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPASSANIGVVDRIFT 655
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+ + I Y
Sbjct: 656 RVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEYI 715
Query: 653 VTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ K L TH EL EG K E + Y ++V +DI+FL ++V
Sbjct: 716 SNSKLLGAKTLFATHYHELTELEG---KIENVNNYCIAV------KEKGDDIIFLRKIVK 766
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLE------AAQNNKHVERWSHENISAQDQQYK 764
G A SYG+ A LAGVP V RA ++E K +E E+ S Q ++
Sbjct: 767 GGADKSYGIQVARLAGVPQSVTDRAKEIVEELVQADVTGRIKDIEVQGQES-SKQKTKHF 825
Query: 765 NAVE--KMLAFDVLKGD 779
+ V+ +M FD +K D
Sbjct: 826 DEVDLAQMSLFDTVKDD 842
>gi|68471372|ref|XP_720234.1| hypothetical protein CaO19.10228 [Candida albicans SC5314]
gi|46442092|gb|EAL01384.1| hypothetical protein CaO19.10228 [Candida albicans SC5314]
Length = 502
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 247/478 (51%), Gaps = 35/478 (7%)
Query: 331 TELAYVY--ELVIGIIDVNR---------SKEKGYGTLVREGFCDELDELRQIYEELPEF 379
TELA Y EL+I ++ + + E+ + G D LDELR Y L E
Sbjct: 18 TELALFYNQELMIAFNELEKLILSYAEPITSEEDNKLRIINGVDDTLDELRIQYNNLEEV 77
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
L+E + + +E+F VYI Q+G+L+ + D + ++
Sbjct: 78 LQETTR---IIAANFLEEVF--NTVYIPQLGFLVS----READVQTADSTFMPNEWQEVF 128
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
+ ++Y T + +LD GDIY I D E I + +++ + F+ +++ A ELD
Sbjct: 129 RTSTNIYYKTDEVWQLDEQYGDIYTSINDREIEIIQSMLAKVSEFNTVIIQVGEAAVELD 188
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITG 559
C SL+ V+ NY P +T L+I GRH L E + F+PNDT D++ +I ++TG
Sbjct: 189 CLCSLSEVSQFRNYSFPCITDTNELEIVQGRHPLVETFSNMFVPNDTIFDSEEKIMVVTG 248
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDL 611
N SGKS+Y+ Q ALIV ++ IG +PA+ AT+G+ D + + +QS+F ID+
Sbjct: 249 ANLSGKSVYLNQTALIVVMAQIGCAIPAENATLGIADKILTRISSRESLDKQQSTFAIDV 308
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTEL 670
+Q+ + AT +SL ++DEFGKG+ D + GGT++YF + P+ + TH +L
Sbjct: 309 YQLSKCISLATDRSLVIVDEFGKGSDPIDSTSMFGGTLSYFKKKSLDCPRCIFSTHFLDL 368
Query: 671 L--NEGC-LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E C + +S ++K + +L + ++ ++++ +LY++ PG A S+G++CA L G+
Sbjct: 369 FKDKEFCNMYQSPKIKMMSTEILLEKTTNSMLDNVTYLYKVKPGLATKSFGIYCAKLCGI 428
Query: 728 PAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQY---KNAVEKMLAFDVLKGDLRL 782
+VI+RA Y+ + N V + ++Q Y K V K L + +L +
Sbjct: 429 SEKVIQRAEYIAQMLDNGDDVAYELTKLSEEEEQNYSVAKTVVTKFLEIEFEDAELSI 486
>gi|442771149|gb|AGC71844.1| DNA mismatch repair protein MutS [uncultured bacterium
A1Q1_fos_1877]
Length = 815
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 168/624 (26%), Positives = 291/624 (46%), Gaps = 71/624 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++ + +D +L++ QT + + +++ G++++ TPMG RLL W P
Sbjct: 201 SRHMIIDEATRRSLELAQTLRD--------GRRDYTLLGILDETCTPMGSRLLAEWLSSP 252
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D E + R +AI FL L + E LK D+ + + + + D
Sbjct: 253 LTDPEQITQRQDAIEEFLQQLSLRDDVRELLKQTYDLQRLTSRIATGRC--SPRDLVCLA 310
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
+++ L + ++ +S R Q ++ +A IT +A V E + + D
Sbjct: 311 RTLEQLPRLRA--KLAERKSKRLQTLEQRIELCPQAHEAIT--MAVVDEPPMNVTD---- 362
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G ++R GF ELDE R + +++ + + E+ + + I +
Sbjct: 363 -----GGVIRPGFNAELDEFRDLMRGGRQWMAQYQAKEIER-----TGISSLKIGFNKVF 412
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + E ++ + Y TP+ +E ++ + + +
Sbjct: 413 GYYLEVTAANSSRVPPEYIRKQTLKNQER--------YITPELKEYEDKVLRAEDRAKAL 464
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E+ + L + F LL+ + AE+D LA +A + Y RP LT EP++DI++G
Sbjct: 465 EQELFTALRDQVATFVPLLLRTADSMAEIDVIAGLATLAGKAGYCRPTLTAEPIMDIRDG 524
Query: 530 RHVLQE--MTVDTFIPNDTRI-----DND----GRINIITGPNYSGKSIYIKQVALIVFL 578
RH + + + F+PND ++ ++D GR+ IITGPN +GKS YI+Q ALI +
Sbjct: 525 RHPVLDRLLPAGQFVPNDVKLGLPCPEDDKRAIGRVQIITGPNMAGKSTYIRQAALITIM 584
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +GSFVPA +A +G+ D S + QS+FM+++ + +L ATS+SL +LD
Sbjct: 585 AQMGSFVPAKSAMIGIADRVFARVGASDELARGQSTFMVEMTETARILNSATSRSLVILD 644
Query: 631 EFGKGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTM 687
E G+GT T DGI L + + C + + TH EL + K
Sbjct: 645 EIGRGTSTYDGISLAWAITEHLHDEIAC----RTMFATHYHELTDLTTTLK----HAANW 696
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+V E+N ED+VFL+R+V G A SYG+H A +AGVP V RAA +L+ +++ H
Sbjct: 697 NVAVQESN----EDVVFLHRIVEGAAGRSYGIHVAKIAGVPRLVTDRAATILQTLEDD-H 751
Query: 748 VERWSHENISAQDQQYKNAVEKML 771
V + ++ + +K L
Sbjct: 752 VNADGRPKVPQRETTKQRRQQKSL 775
>gi|291550404|emb|CBL26666.1| DNA mismatch repair protein MutS [Ruminococcus torques L2-14]
Length = 888
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 292/598 (48%), Gaps = 62/598 (10%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ +D++ L++ +T + G S+ +++K T MG R LR +P+
Sbjct: 270 KYMLIDSSTRRNLELCETLREKQKRG--------SLLWVLDKTRTAMGARTLRKNVEQPL 321
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+D +N RL+A+ + E L V D+ ++ K S D TAF
Sbjct: 322 IDKSEINRRLDAVEELKNQAIAREEIREYLSPVYDLERLITKITYGSA--NPRDLTAFKG 379
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
S+ L + I + + L+E + D +E +T + L + K
Sbjct: 380 SLEMLPPIRYILQDLQAPLLKEIYE--DLDALEDLCELVTKAIREDPPLAM--------K 429
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQ 408
E G ++R+G+ +E+D+LR+ + ++L ++ + E + +L I Y
Sbjct: 430 E---GNIIRDGYNEEVDKLRRAKSDGKDWLAKLENDEREKTGIKNLK-------IKYNKV 479
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + + + L + +R Y TP+ +EL++++ K+
Sbjct: 480 FGYYLEVT------NSYKDLVPDYYTRKQTLANAER--YITPELKELEDMILGAEDKLYA 531
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E + ++ I + + + A LD F SLALVA +NNY+RP + + +LDI+
Sbjct: 532 LEYELYSEVRETIAGQVERIQQTAKAVAALDAFSSLALVAERNNYVRPKINEKGILDIKE 591
Query: 529 GRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q ALI ++ IGSFV
Sbjct: 592 GRHPVVERMIPNDMFIANDTYLDDKKHRISIITGPNMAGKSTYMRQTALIALMAQIGSFV 651
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA++A + L+D S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT
Sbjct: 652 PAESANICLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTS 711
Query: 638 TEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ + + Y + K L TH EL EG K + + Y ++V
Sbjct: 712 TFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV------ 762
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
+DIVFL ++V G A SYG+ A LAGVP VI RA ++E + R S
Sbjct: 763 KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDLVISRAKEIVEELSDEDITNRVSE 820
>gi|332982487|ref|YP_004463928.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
gi|332700165|gb|AEE97106.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
Length = 882
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 289/585 (49%), Gaps = 58/585 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ +++ LDA L++ +T + SH G ++ +++ T MG R+L++W +
Sbjct: 262 IQQYMILDAATRRNLELCETMRSGSHKG--------TLMWVLDHTSTAMGGRMLKSWIEQ 313
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L++ LN R A+ + E L + DI ++ K + A D A
Sbjct: 314 PLLNINALNERQEAVEAMANQPLWKDDIKEALSGIYDIERLMSKAVYGNI--NARDLIAL 371
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+S+ L +N++ G + L+ + D+++ +Y L+ I +
Sbjct: 372 KQSLGRLPRLNELALQGKAARLKTLGQ--RIDVMDD-----------IYTLIDKAIADDP 418
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G ++++G+ +DELR I +++ + E + K + V Y
Sbjct: 419 PLSVKDGNIIKDGYDQSVDELRDISHNGRQWISRLEQQERDRTG--IKSLKVG---YNKV 473
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + + D + ++ A ++ Y TP+ +E++N + +++
Sbjct: 474 FGYYIEVTKSYYDMVPADYIRKQTLANAER--------YITPELKEMENKILSASERLVA 525
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I D+ + + + + AELDC SLA A +N+Y+RP+L + IQN
Sbjct: 526 LEYQIFADIRDTVVGHIKRVQQTASAIAELDCLCSLADAAIENHYVRPVLNEGQRIVIQN 585
Query: 529 GRHVLQEMTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH + E + TF+PNDT +DN + + IITGPN +GKS Y++QVALIV ++ IGSFV
Sbjct: 586 GRHPVVEKVLPPHTFVPNDTLLDNGEDMVCIITGPNMAGKSTYMRQVALIVLMAQIGSFV 645
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD A +G+ D S ++ QS+FM+++ +V +L AT++SL +LDE G+GT
Sbjct: 646 PADMAEIGIVDRIFTRVGASDDLSTGQSTFMVEMTEVAHILHNATAKSLLILDEIGRGTS 705
Query: 638 TEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ + I Y + K L TH EL EG L +K Y +SV
Sbjct: 706 TFDGLSIAWAVIEYVADPGRLGAKTLFATHYHELTELEGRLTG---VKNYYISV------ 756
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+D++FL +++ G + S+G+ A LAG+P +VI RA +L+
Sbjct: 757 REHGDDVIFLRKIMRGGSGRSFGIQVARLAGLPQDVIDRAREILD 801
>gi|333383386|ref|ZP_08475047.1| DNA mismatch repair protein mutS [Dysgonomonas gadei ATCC BAA-286]
gi|332827835|gb|EGK00570.1| DNA mismatch repair protein mutS [Dysgonomonas gadei ATCC BAA-286]
Length = 870
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 172/594 (28%), Positives = 286/594 (48%), Gaps = 61/594 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ T M G G S+ ++++ +PMG R
Sbjct: 253 ITSLSRIEEDKYVRLDKFTVRSLELIST------MNEG----GKSLLDILDRTTSPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W + P+ D + +NSRL+ + +F EL L E L + D+ I+ K
Sbjct: 303 MLRRWMVFPLKDAKPINSRLSVVEYFFKDLELKGLLEEQLSLIGDLERIISKVAVNRI-- 360
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
T + ++ ++ + + F SLRE I EK C + E +
Sbjct: 361 TPREVVQLKVALKAIEPIREAFLASSEPSLRE--------IGEKLNPC-----PIIRERI 407
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + G ++ +G ELDELR I ++L L++ Q +
Sbjct: 408 EKEIHPDPPTMLNRGNVINKGVNAELDELRDISYSGKDYL-----LKIQQRETEATGISS 462
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + + D E ++ ++ Y T + ++ + +
Sbjct: 463 LKISFNSVFGYYIEVRNAHKDKVPAEWIRKQTLVNAER--------YITQELKDYEEKIL 514
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KIL +E A+ DLV + + + N A+ DC LS A VA +N Y+RP +
Sbjct: 515 GAEEKILSLETALFNDLVLSLVEYIPTIQVNANLIAQTDCLLSFAKVAKENKYIRPEIND 574
Query: 521 EPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
L I+NGRH + E + +++I ND +D N +I IITGPN +GKS ++Q ALI
Sbjct: 575 TDALKIKNGRHPVIEKQLPLGESYITNDVFLDSNSQQIIIITGPNMAGKSALLRQTALIT 634
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ GSFVPA++A +GL D S +++ +S+FM+++++ +L + +SL L
Sbjct: 635 LMAQAGSFVPAESAQIGLVDKIFTRVGASDNISLGESTFMVEMNEAADILNNLSPRSLVL 694
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYT 686
DE G+GT T DGI + + Y K L TH E LNE + KS +R+K +
Sbjct: 695 FDELGRGTSTYDGISIAWAIVEYIHEHPKAKAKTLFATHYHE-LNE--MEKSFKRIKNFN 751
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+SV +N I+FL +LVPG + S+G+H A +AG+P ++KRA +L+
Sbjct: 752 VSVKEMDNR------IIFLRKLVPGGSEHSFGIHVAKMAGMPQSIVKRANNILK 799
>gi|300362260|ref|ZP_07058436.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
gi|300353251|gb|EFJ69123.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
Length = 857
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 172/589 (29%), Positives = 281/589 (47%), Gaps = 71/589 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-----NSPSFIYTASDW 285
L + +N R + L + ++LK V D+ + + N+ + A
Sbjct: 304 LSVTEINRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSL 363
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A + SLL N L NF A I L +++L++ I
Sbjct: 364 GAIPDILNSLLETNNP-------------HLQNF------AKQIDP-LKGIHDLIVNTIV 403
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCI 403
N G L+REG D+LD R ++L E+ S E+ + +L +
Sbjct: 404 DNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------V 456
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + D ++ ++ T Y TP+ +E ++L+ +
Sbjct: 457 GYNKVFGYYIEVTNSNKDKVPTDR-------YTRKQTLTNAERYITPELKEHESLILEAE 509
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K +E + L ++ + L K A LD + A V+ QNNY+RP T++
Sbjct: 510 AKSTGLEYDLFVKLRENVKKYIPALQKLAKQVASLDVLIDFATVSEQNNYVRPDFTVDKQ 569
Query: 524 -LDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+++ NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++
Sbjct: 570 EINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTDIFLITGPNMSGKSTYMRQMALIAIMAQ 629
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE
Sbjct: 630 IGCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLILFDEI 689
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLR 691
G+GT T DG+ L G + Y + V K L TH EL + + LK + V
Sbjct: 690 GRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTD-----LDQTLKHLKNIHVGA 743
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
E N ++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 744 TEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRKVLREATTMLK 788
>gi|261367034|ref|ZP_05979917.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282571152|gb|EFB76687.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
Length = 872
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 186/597 (31%), Positives = 295/597 (49%), Gaps = 70/597 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I +V + ++++L L++ +T + GR K G ++ +++K T MG+R
Sbjct: 264 IKTVDNYADAQYMRLSPVTRANLELTETMR-------GREKRG-TLLWVLDKTETSMGKR 315
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDI----PHILKKFNSP 276
LLR+W +P++D E +N+RL+A+ + A L E L +V DI IL +P
Sbjct: 316 LLRSWIEQPLVDAEAINARLSAVQALYTANIARADLKEALSHVFDIERLTTRILYGSATP 375
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ D A L + + + L +Q+ L+ D+++K ITT L
Sbjct: 376 REVKALGDTCARLPEVKTQASACG---APLLTQLADQIDPLD-DLLQK----ITTAL--- 424
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
+D + K G +R G+ E+DELR I +L A+LE L +
Sbjct: 425 -------VDDPPATLKD-GGAIRAGYNSEVDELRDIMHGGKGYL---ANLET----KLRE 469
Query: 397 EMFVP--CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
E +P I + GY + + D +F+ T Y TP+ +E
Sbjct: 470 ETGIPKLKIGFNKVFGYYIEVSRSYTDSVP--------DSFTRKQTLTTGERYITPELKE 521
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
L+N + ++L +E + DL+S I + + A+LD A VA QNNY+
Sbjct: 522 LENKILGANERLLVLEHQLFADLLSEISAQIVRIQRTALAVAQLDVLAGFAEVALQNNYV 581
Query: 515 RPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQ 571
P++ +++I+ GRH V+++M T F+PNDT +D + R+ +ITGPN +GKS Y++Q
Sbjct: 582 LPVVDQSGVIEIKEGRHPVIEQMLKGTLFVPNDTLLDEGENRMLLITGPNMAGKSTYMRQ 641
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
ALI ++ IG FVPA +A +G+ D S + A QS+FM+++ +V +LR A+
Sbjct: 642 NALIALMAQIGCFVPAASAHIGVVDAIFTRVGASDDLAAGQSTFMVEMTEVAEILRHASK 701
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERL 682
SL +LDE G+GT T DG+ + + Y CD + K L TH EL + +
Sbjct: 702 NSLVILDEIGRGTSTFDGMSIARAVVEYI--CDNIGCKTLFATHYHELTSMD--QDIYGV 757
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
K Y ++V + EDI FL R+V G A SYG+ A LAG+P+ V KRA VL
Sbjct: 758 KNYNIAVKKRG------EDITFLRRIVAGPADDSYGIEVAKLAGLPSSVTKRAHAVL 808
>gi|325295187|ref|YP_004281701.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065635|gb|ADY73642.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 842
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 178/587 (30%), Positives = 285/587 (48%), Gaps = 72/587 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ LD + L++ + I E S+FG++NK T MGRRLL+ W L P+
Sbjct: 245 KYIYLDPQTQKNLELIEP--------IAGKLESASLFGVLNKTKTGMGRRLLKFWILHPL 296
Query: 231 LDLENLNSRLNAI-----SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
D + + RL+A+ SFF+ E L E L V DI +L K S I + D
Sbjct: 297 KDKKEIEERLDAVEELKDSFFVADEIL-----ELLSKVYDIERLLSKITSG--IASPRDL 349
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
+F S+ L + K+ SL Q+ NFD +L +Y + ++
Sbjct: 350 ASFRNSLGVLPDLKKLL-ADFKSSLLSQI-YKNFD-----------DLYDIYCELERVLV 396
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLCKEMFVPCIV 404
N G L++EG ELDELR+I E + L+E+ E + K F
Sbjct: 397 ENPPFTSREGGLIKEGVNPELDELRRIKNEGEKILKEIEERERKRTGISSLKIGFNNVFG 456
Query: 405 YIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
Y ++ L + E + TL + F TP+ +E + +
Sbjct: 457 YYIEVSKANLHLVPENYIRRQTLVNAERF----------------ITPELKEFEEKILSA 500
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
+I +E + +L + +D + K A +D LS + +A++ Y +P +T
Sbjct: 501 QERIEKIEYQLFVELRKFVSKNADRISKTAEKIATIDVLLSFSKIANERGYTKPRVTEGY 560
Query: 523 LLDIQNGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
+ I+NG+H VL++ + FIPNDT + I I+TGPN GKS++++Q ALI ++ I
Sbjct: 561 SIKIKNGKHPVLEKFLEEDFIPNDTELTEKEFILIVTGPNMGGKSVFLRQTALITIMAQI 620
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA+ A +G+ D + +++ S+FM+++ + +L+ A +SL +LDE G
Sbjct: 621 GSFVPAEEAEIGIVDRIFSRVGAADNLSKGLSTFMMEMVETANILQNAGKRSLIILDEIG 680
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
+GT T DG+ + + Y ++ V K L TH EL EG K + +K + ++V
Sbjct: 681 RGTSTYDGMSIAKAVVEY-ISGKVGAKTLFATHYHELTELEG---KVKGVKNFHVTV--- 733
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
D E IVF ++++PG + SYG+H A LAG+P EVI RA +L
Sbjct: 734 --EEID-EKIVFTHKVLPGASEKSYGIHVAELAGLPKEVIDRAKEIL 777
>gi|336477855|ref|YP_004616996.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
gi|335931236|gb|AEH61777.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
Length = 881
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 297/594 (50%), Gaps = 64/594 (10%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S + F+ LD+ L++ + + G G++ ++ G+++ +TPMG R+L+ W L
Sbjct: 265 SDSDFMILDSITLRNLEVVRNVR-----GEGKSA---TILGVLDDTMTPMGSRILQKWIL 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF---NSPSFIYTASD 284
+P++ ++N RL+A+ F + L + L V+DI + + NS A D
Sbjct: 317 KPLISTSDINKRLDAVEEFTHNTLLRYDIRSHLSRVRDIERLTGRIVYGNS-----NARD 371
Query: 285 WTAFLKSICSLLHVNKIFEVGISE---SLREQLRLLNFDIVEKAASCITTELAYVYELVI 341
A KS+ ++ + + + SE SL Q L +F +E I + V E +
Sbjct: 372 LVALKKSLEAVPEIRSLQKEMDSEMIVSLTGQ--LYDFSQLESLIDLI--DCGIVDEPPV 427
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
+ D G L++ G+ ELDE+R + E+ +AS + + +
Sbjct: 428 SVRD---------GGLIKSGYSTELDEIRGMSRHGKEW---IASFQKRERERTGIKSL-- 473
Query: 402 CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
+ Y GY + + K + + + + ++ ++R ++TP+ ++ + +
Sbjct: 474 KVGYNKVFGYYIEV--TKANSSQVPE----DYIIKQTMANSER--FYTPELKKWEEAIIS 525
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
KI +E + ++ S I +S L K + ++D +LA +A NY RP +T +
Sbjct: 526 ADEKITTLEYELFSEINSKISDYSKQLQKTADVIGKMDVLSNLAEIAVNRNYTRPAVTAD 585
Query: 522 PLLDIQNGRHVLQEMTV-DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLS 579
+ +++GRH + E +V F+PNDT +D + + +ITGPN +GKS Y++QVALIV ++
Sbjct: 586 CRILVRDGRHPVVESSVPGGFVPNDTEMDCSKNQFALITGPNMAGKSTYMRQVALIVIMA 645
Query: 580 HIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
GSFVPA A++GL D + + QS+FM+++ ++ +L AT +SL LLDE
Sbjct: 646 QAGSFVPASHASIGLVDRIFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLILLDE 705
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
G+GT T DG + + Y D + + TH +L + + ER+ Y ++V
Sbjct: 706 IGRGTSTYDGYSIAKAVVEYIHNKDRAGVRSMFATHYHQLTD--LSERLERVNNYHIAV- 762
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
R E +D+VFL +++PG SYG+H A LAGVP V +RA +LE +N
Sbjct: 763 REEG-----DDLVFLRKIIPGATDKSYGIHVARLAGVPRRVTQRAKEILEGIEN 811
>gi|299145064|ref|ZP_07038132.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_23]
gi|336412923|ref|ZP_08593276.1| DNA mismatch repair protein mutS [Bacteroides ovatus 3_8_47FAA]
gi|423293750|ref|ZP_17271877.1| DNA mismatch repair protein mutS [Bacteroides ovatus CL03T12C18]
gi|298515555|gb|EFI39436.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_23]
gi|335942969|gb|EGN04811.1| DNA mismatch repair protein mutS [Bacteroides ovatus 3_8_47FAA]
gi|392677708|gb|EIY71124.1| DNA mismatch repair protein mutS [Bacteroides ovatus CL03T12C18]
Length = 872
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILILETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|448444644|ref|ZP_21589934.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
gi|445686057|gb|ELZ38398.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
Length = 935
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 196/671 (29%), Positives = 310/671 (46%), Gaps = 81/671 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEALQ 184
S++ +RA+G +L +E E+G + +I + + + +DAT L+
Sbjct: 235 SDLALRAAGAVLGYVE-----------ETGAGVLASITRLTAYGDDDHVAVDATTQRNLE 283
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + G G EG S+F ++ VT G RLLR W RP D L+ RL+A+
Sbjct: 284 LTETMR-----GDG---EG-SLFETIDHTVTAAGGRLLREWITRPRRDRAELDRRLDAVE 334
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHVNK 300
+ L ETL D+ + + S S + + D A + ++ +
Sbjct: 335 ALASAALARDRLRETLGDAYDLERLAARATSGSAGARELLSVRDSLALVPALADAVSGTA 394
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+ + ++ L R E+AAS +++ + + + K K G L+RE
Sbjct: 395 LADSPLAGVLERIDR-------ERAAS--------LHDELADALAEDPPKTKTQGGLLRE 439
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC--IF 416
G+ DELDEL +EE+ E+L+ +A E Q L H+ + YI Q+G +
Sbjct: 440 GYDDELDELIARHEEVNEWLDTLAEREKRQYGLSHVTVDRNKTDGYYI-QVGKSAADGVP 498
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
E + TL+ + F +D E +R + R GD+ +++ + +
Sbjct: 499 EHYREIKTLKNSKRF---VTDELEEREREVLRLEEAR------GDLEYELFE-------E 542
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L + ++ L A AE+D SL+ A N++ RP L+ E LD++ GRH + E
Sbjct: 543 LRERVAADAELLQDAGRAVAEIDALASLSTHAAGNDWTRPELSDERRLDVEAGRHPVVER 602
Query: 537 TVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AATVGL D
Sbjct: 603 TTD-FVPNDLRLDGERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAATVGLVD 661
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 662 GIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIAWAA 721
Query: 649 INYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
Y +V + L TH EL LP+ E + + D E + FL
Sbjct: 722 TEYL-HNEVRARTLFATHYHELTTLADHLPRVENVHVAV--------DERDGE-VTFLRT 771
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAV 767
+ G SYG+H A LAGVP V+ RA VL+ + K +E + +
Sbjct: 772 VRDGPTNRSYGVHVADLAGVPEPVVSRADTVLDRLREEKAIEAKGGGRGGGTGGEDLDGD 831
Query: 768 EKMLAFDVLKG 778
K + FD+ G
Sbjct: 832 TKQVVFDLSSG 842
>gi|336403364|ref|ZP_08584080.1| DNA mismatch repair protein mutS [Bacteroides sp. 1_1_30]
gi|335946537|gb|EGN08342.1| DNA mismatch repair protein mutS [Bacteroides sp. 1_1_30]
Length = 872
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILILETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|119953574|ref|YP_945784.1| DNA mismatch repair protein MutS [Borrelia turicatae 91E135]
gi|254766616|sp|A1R0M2.1|MUTS_BORT9 RecName: Full=DNA mismatch repair protein MutS
gi|119862345|gb|AAX18113.1| DNA mismatch repair protein MutS [Borrelia turicatae 91E135]
Length = 860
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 163/565 (28%), Positives = 276/565 (48%), Gaps = 74/565 (13%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
+S++ ++N C TPMG+RLLR + L P+LD+ +N+RL+ + F + L L + L V
Sbjct: 284 YSLYSVLNDCKTPMGKRLLREYILNPLLDIVAINNRLDHVEFLNNNINLSMKLRDILSNV 343
Query: 264 KDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNK----IFEVGISESLREQL 314
DI I +KK+ F+ TAF + LL+ + IF+V ++RE
Sbjct: 344 WDIERIISRLQMKKYVKKDFLLIKESLTAFFLA-KRLLNEHSFSYWIFDVNDENNIRE-- 400
Query: 315 RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYE 374
+ +ID + SKE L++ G+ E+D LR+I
Sbjct: 401 -------------------------IYSLIDCSISKEPD--ELIQHGYNFEIDRLREIKN 433
Query: 375 ELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
+++++ + E + + I +I FE + + Q+ F
Sbjct: 434 NASKYVDDYLNFE--------RNFSKISSLKIRRINVRGLFFE--VTKSYYGQVPS-HFI 482
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
S KR Y T K EL+ + D +L +E+ + D+ S I S + K NF
Sbjct: 483 ESQTLNSVKR--YKTNKLIELERDINDAEDNLLALEQEVFDDIASKIVKHSVVIKKIANF 540
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE---MTVDTFIPNDTRIDND 551
A +D A +A +N Y+RP LT + ++ RH + E V+ F N +IDND
Sbjct: 541 FAYVDVVSDFAYLAKKNEYVRPTLTNNKEIILECSRHPVVEHYMKGVEAFTKNSVKIDND 600
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+ITGPN +GKS Y++Q AL+V + HIGSFVPA+ A +G+TD S +++
Sbjct: 601 KYFCLITGPNMAGKSTYLRQTALVVLMGHIGSFVPANQAIIGITDKIFCRIGASDNISKG 660
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLV 663
+S+F++++++ +LR AT SL ++DE G+GT T DG+ + + Y + + + L
Sbjct: 661 ESTFLVEMNETANILRNATQNSLIIMDEVGRGTSTNDGLAIAYSIVEYILE-HIQARSLF 719
Query: 664 CTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH EL K + +M + R ++++FL + +L SYG++ A
Sbjct: 720 ATHFHEL----SAIKHDSFVNLSMKIERQG------DELIFLREVEEKPSLNSYGIYVAR 769
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHV 748
+AG+P +VI+RA +L++ + +H+
Sbjct: 770 IAGIPLKVIERANVILKSLTSREHL 794
>gi|262405774|ref|ZP_06082324.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_22]
gi|294648045|ref|ZP_06725590.1| DNA mismatch repair protein MutS [Bacteroides ovatus SD CC 2a]
gi|294810446|ref|ZP_06769102.1| DNA mismatch repair protein MutS [Bacteroides xylanisolvens SD CC
1b]
gi|345510287|ref|ZP_08789855.1| DNA mismatch repair protein mutS [Bacteroides sp. D1]
gi|229442989|gb|EEO48780.1| DNA mismatch repair protein mutS [Bacteroides sp. D1]
gi|262356649|gb|EEZ05739.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_22]
gi|292636552|gb|EFF55025.1| DNA mismatch repair protein MutS [Bacteroides ovatus SD CC 2a]
gi|294442333|gb|EFG11144.1| DNA mismatch repair protein MutS [Bacteroides xylanisolvens SD CC
1b]
Length = 872
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPPEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|160884834|ref|ZP_02065837.1| hypothetical protein BACOVA_02824 [Bacteroides ovatus ATCC 8483]
gi|156109869|gb|EDO11614.1| DNA mismatch repair protein MutS [Bacteroides ovatus ATCC 8483]
Length = 898
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 280 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 329
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 330 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 389
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 390 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 442
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 443 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 481
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 482 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 532
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 533 LKEYEEKILGAEDKILILETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 592
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 593 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 652
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 653 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 712
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 713 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 769
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 770 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 823
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 824 ILKQLESD 831
>gi|392393733|ref|YP_006430335.1| DNA mismatch repair protein MutS [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524811|gb|AFM00542.1| DNA mismatch repair protein MutS [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 850
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 282/572 (49%), Gaps = 59/572 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L E+++ RL+ + + L L
Sbjct: 267 GQGKKG-TLLSVLDFTKTAFGGRLLRRWIEQPLLLKEDIDKRLDYVEALVEDSFLRGDLI 325
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ V D+ ++ K + + A D + +++ L + + G SE L+ + L
Sbjct: 326 QLFSKVFDLERLMGKVSYGT--ANARDLLSLSQTLGVLPQLRALLAEGKSEPLQAFIPTL 383
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D + +T E A E I + D G L++ G+ +E+DELR I
Sbjct: 384 EGLDSL-----ALTLEQAINPEAPISLRD---------GNLLKAGYSEEIDELRSISSGG 429
Query: 377 PEFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
++ ++ S+E + L ++F I H +L I E + TL + F
Sbjct: 430 KAWVAKLESMEKDRTGIRSLKVGYNKVFGYYIEVTHANSHL--IPPEYIRKQTLANAERF 487
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
TP+ +E + + K+ +E + +L + + +L+A
Sbjct: 488 ----------------ITPELKEYEQKILGAEEKVTQLEYQLFLELREKVRQHAARILEA 531
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID 549
+ AE+D + SLA A +++Y RP++ +E L I GRH V++ M DT F+PNDT +
Sbjct: 532 AHSLAEIDVYTSLAEAAVRHHYSRPVMMMEGSLTIIEGRHPVVESMLQDTSFVPNDTLLT 591
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + +ITGPN +GKS Y++QVALIV ++ IG FVPA AT+ + D S +
Sbjct: 592 PDKHLALITGPNMAGKSTYMRQVALIVLMAQIGCFVPAQQATIPIADHIFTRVGASDDLA 651
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+ QS+FM+++++V +LR T SL +LDE G+GT T DG+ + Y + PK
Sbjct: 652 SGQSTFMVEMYEVAHILRHVTPHSLIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKT 711
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH EL + + + + V E+ E+IVFL++++PG A SYG+
Sbjct: 712 LFATHYHELTDL----EETHAGIFNLHVGVREHG----EEIVFLHKIIPGRADRSYGIQV 763
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
A LAG+PA +++RA +L +++ R +H
Sbjct: 764 AKLAGLPANLLQRAKIILHELESSSKESRQAH 795
>gi|237722019|ref|ZP_04552500.1| DNA mismatch repair protein mutS [Bacteroides sp. 2_2_4]
gi|298482523|ref|ZP_07000708.1| DNA mismatch repair protein MutS [Bacteroides sp. D22]
gi|229448888|gb|EEO54679.1| DNA mismatch repair protein mutS [Bacteroides sp. 2_2_4]
gi|298271230|gb|EFI12806.1| DNA mismatch repair protein MutS [Bacteroides sp. D22]
Length = 872
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLINVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPPEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 863
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 284/577 (49%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+++ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ + ++ +
Sbjct: 271 IQRSRKN-SLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQI 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + +SI L + K+ ++ L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYEG 387
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ L +Y L+ I+ + G ++++GF +E+D LR I +
Sbjct: 388 LD-------------TLEDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L + E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVQYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K ++
Sbjct: 488 NAER--------YITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASY 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + +NGRH + E + FIPNDT +D +
Sbjct: 540 IAILDVLCSFARIAIDNEYVRPNVCLGDRIYFKNGRHPVVEKMIGRGNFIPNDTELDQAE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N I+FL ++V G SYG+H
Sbjct: 720 FATHYHELTELEERIPG---VKNYRVDVKEEGKN------IIFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K++ + E
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKE 807
>gi|153954199|ref|YP_001394964.1| DNA mismatch repair protein MutS [Clostridium kluyveri DSM 555]
gi|219854807|ref|YP_002471929.1| hypothetical protein CKR_1464 [Clostridium kluyveri NBRC 12016]
gi|189030764|sp|A5N8I5.1|MUTS_CLOK5 RecName: Full=DNA mismatch repair protein MutS
gi|254766624|sp|B9E1Z0.1|MUTS_CLOK1 RecName: Full=DNA mismatch repair protein MutS
gi|146347080|gb|EDK33616.1| MutS [Clostridium kluyveri DSM 555]
gi|219568531|dbj|BAH06515.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 871
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 178/620 (28%), Positives = 300/620 (48%), Gaps = 76/620 (12%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L+I ++ + G S+ G+++K T MG R LR W +P++
Sbjct: 261 YLTIDINSKRNLEIVESLRESKKKG--------SLLGVIDKTNTSMGGRQLRKWIEQPLI 312
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + RL+++ L + L E LK + DI + K +S S A + + S
Sbjct: 313 DRNKIMERLDSVEEILNNICYHEDLKEALKNIYDIERLAGKISSKSV--NAKELNSLKSS 370
Query: 292 ICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
I + + I FE + +++ + L EL +Y L+ I N
Sbjct: 371 IEKIPDIKVILSNFETSLLKNMYKNL----------------DELKDIYMLLDKAILDNP 414
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYI 406
S G L++EG+ E+D L++ + +++ E + EL ++ L I Y
Sbjct: 415 SVSLKEGNLIKEGYDSEIDRLKEAKVKGKDWIASLESSERELTKIKSLK-------IGYN 467
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + ++ + L + + +R Y TP+ +E+++ + K+
Sbjct: 468 KVFGYYI-----EVTKSNLNLVPEHRYIRKQTLSNAER--YITPELKEMEDKILGAEEKL 520
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+ +E ++ + + + +E+DC SLA A +NNY +P +TL + I
Sbjct: 521 IYLEYNAFVEVRDKVEKEVTRIQNSARIISEVDCLTSLARAALENNYCKPEITLSDRVYI 580
Query: 527 QNGRHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH + E + T F+ NDT ID + ++ +ITGPN +GKS Y++QVAL+ ++ IGS
Sbjct: 581 EEGRHPVVENMLSTGEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGS 640
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA +A++ + D S + + +S+FM+++ +V +L+ AT++SL LLDE G+G
Sbjct: 641 FVPAKSASISICDKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRG 700
Query: 636 TLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
T T DG+ + I Y + K L TH EL EG K + +K Y +SV E
Sbjct: 701 TSTYDGLSIAWSVIEYICRESKLRCKTLFATHYHELTKLEG---KIKGVKNYCVSVKEVE 757
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
NN IVFL +++ G A SYG+ A LAG+P EV+KRA +L + + K E
Sbjct: 758 NN------IVFLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAREILNSLETEKTEESMEG 811
Query: 754 ENI---------SAQDQQYK 764
N+ S+Q +Q K
Sbjct: 812 TNLPKKKKEEKTSSQGEQLK 831
>gi|313149814|ref|ZP_07812007.1| DNA mismatch repair protein mutS [Bacteroides fragilis 3_1_12]
gi|423281378|ref|ZP_17260289.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 610]
gi|424665675|ref|ZP_18102711.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 616]
gi|313138581|gb|EFR55941.1| DNA mismatch repair protein mutS [Bacteroides fragilis 3_1_12]
gi|404573928|gb|EKA78679.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 616]
gi|404583082|gb|EKA87765.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 610]
Length = 871
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 182/637 (28%), Positives = 305/637 (47%), Gaps = 89/637 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D E + G+ I S+ + +K+++LD +L++ +
Sbjct: 234 ASGAILQYL------DMTEHTQVGH----ITSLARIEEDKYVRLDKFTVRSLELIGS--- 280
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG RLL+ W + P+ D + +N RLN + +F +
Sbjct: 281 ---MNDG----GSSLLNVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPD 333
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
+ + L + D+ I+ K SP + A +K C + +
Sbjct: 334 FRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACRQADNPSLNRI 393
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L I ++ I + + +N+ G ++++G
Sbjct: 394 G------EQLNLC-ISIRDRIEKEINNDPPLL---------INK------GGVIKDGVNP 431
Query: 365 ELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI ++L ++ E L +P L I Y GY + + D
Sbjct: 432 ELDELRQIAYSGKDYLLQIQQRESELTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 484
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 485 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 536
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC LS A VA +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 537 EFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDSDVLDIRQGRHPVIEKQLPIGE 596
Query: 540 TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +DN +I IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 597 KYIANDVMLDNATQQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKI 656
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 657 FTRVGASDNISVGESTFMVEMNEASDILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVE 716
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 717 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKL 767
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
G + S+G+H A +AG+P ++KRA +L+ +++
Sbjct: 768 ERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESD 804
>gi|253577912|ref|ZP_04855184.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850230|gb|EES78188.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 874
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 305/620 (49%), Gaps = 73/620 (11%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ +D+++ L++ +T + G S+ +++K T MG R LR++ +P+
Sbjct: 262 KYMLIDSSSRRNLELVETLREKQKRG--------SLLWVLDKTKTAMGARTLRSYVEQPL 313
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+D + + RL A+ + L + E L V D+ ++ + + S D AF
Sbjct: 314 IDRDEIEQRLEALEELNKNGMLRDEIREYLGPVYDLERLISRISYKS--ANPRDLIAFAS 371
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
S+ L ++ ++ L+E L I E S L V +L+ I +
Sbjct: 372 SLEMLPYIKQV--------LKEFKTPLLQKIYEDMDS-----LEDVTDLIKRAIVEDPPL 418
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
+ G +++EG+ +++D+ R+ + ++L E+ + E + K M I Y G
Sbjct: 419 AQKDGGIIKEGYNEDVDKFRRSRTDGKKWLSELEAKERERTG--IKTM---KIKYNRVFG 473
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + I T + L + +R Y T + +EL++L+ K+ +E
Sbjct: 474 YSLEIT------NTFKDLVPDNYIRKQTLTNAER--YITQELKELEDLILGAEDKLYALE 525
Query: 471 RAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
+ RD V + KAV A LD F SLALVA +N+++RP ++DI+
Sbjct: 526 YELFCDVRDAVGKEVMRIQKTAKAV---AALDVFASLALVAERNHFVRPKTNTTGVIDIK 582
Query: 528 NGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
NGRH + E + D FI NDT +DN R++IITGPN +GKS Y++Q ALIV ++ IGSF
Sbjct: 583 NGRHPVVEQMIENDMFIANDTYLDNHKKRVSIITGPNMAGKSTYMRQTALIVLMAQIGSF 642
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA+ A +G+ D S + + QS+FM+++ +V +LR AT++SL +LDE G+GT
Sbjct: 643 VPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATARSLLILDEIGRGT 702
Query: 637 LTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T DG+ + I + + K L TH EL EG +P + Y ++V
Sbjct: 703 STFDGLAIAWAVIEHISNTKLCGAKTLFATHYHELTELEGKIPG---VNNYCIAV----- 754
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
+DIVFL ++V G A SYG+ A LAGVP VI+RA + VE S
Sbjct: 755 -KEKGDDIVFLRKIVQGGADKSYGIQVAKLAGVPDSVIQRAKEL---------VEELSDA 804
Query: 755 NISAQDQQYKNAVEKMLAFD 774
+I+A + +A +K +D
Sbjct: 805 DITAAVKDLTSAKKKKPVYD 824
>gi|346225829|ref|ZP_08846971.1| DNA mismatch repair protein MutS [Anaerophaga thermohalophila DSM
12881]
Length = 873
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 172/605 (28%), Positives = 294/605 (48%), Gaps = 73/605 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +K++ LD L+IF P + G G S+ ++++ +TPMG R
Sbjct: 256 ISNISRIDEDKYVWLDRFTIRNLEIFA----PVNEG------GRSLIDIIDQTITPMGSR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W P+ D++ + R + + F + +L L L+ V D+ ++ K +P
Sbjct: 306 LLKRWVALPLKDVQPILDRQSVVEHFFRAPDLKMELEAHLRPVGDLERLVSKVAVGRITP 365
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ + L+SI + + + + L +QL +C T
Sbjct: 366 REMIQMRNA---LRSIGPVRELCMSADNVVLNHLGDQLN-----------ACDTIRERIE 411
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHL 394
E+V + G ++R+G +LDELR I ++L E+ E+ +P+L
Sbjct: 412 REIV-----PDPPNNINKGNVIRDGVSADLDELRNIAFSGKDYLNELQKREIGRTGIPNL 466
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
I + + GY + + D + ++ ++ Y T + +E
Sbjct: 467 K-------ISFNNVFGYYIEVRNTHKDKVPSDWIRKQTLVNAER--------YITEELKE 511
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
+N + ++L +E + L+S + F + N A LDC L A +A +NNY+
Sbjct: 512 YENKILGAEERMLVLEAELYSALISALTEFIPAIQLNSNLLARLDCLLGFATLAAENNYV 571
Query: 515 RPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIK 570
RP++ +DI+ GRH + E + + ++PND +DND + I IITGPN +GKS ++
Sbjct: 572 RPVVNDSEEIDIRGGRHPVIEKQLPVGEEYVPNDVFLDNDTQQIMIITGPNMAGKSALLR 631
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q ALIV L+ IGSFVPA++AT+G+ D S +++ +S+FM+++++ +L +
Sbjct: 632 QTALIVLLAQIGSFVPAESATIGVVDKIFTRVGASDNISLGESTFMVEMNEAASILNNLS 691
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS-E 680
S SL L DE G+GT T DGI + + Y K L TH E LNE + KS
Sbjct: 692 SGSLVLFDELGRGTSTYDGISIAWSIVEYIHENTKARAKTLFATHYHE-LNE--MEKSYS 748
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R + Y +SV +N ++FL +LVPG + S+G+H A +AG+P V+KRA +L
Sbjct: 749 RCRNYNVSVKEVDNK------VIFLRKLVPGGSEHSFGIHVARMAGMPPSVVKRANEILS 802
Query: 741 AAQNN 745
++N
Sbjct: 803 ELEDN 807
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kronotskyensis 2002]
Length = 863
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 284/577 (49%), Gaps = 59/577 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R+++ S+ G++++ T MG RLL+ W RP++D+ +N RL+++ + ++ +
Sbjct: 271 IQRSRKN-SLLGILDQTKTSMGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQI 329
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L + DI + KF + A D + +SI L + K+ ++ L+E
Sbjct: 330 EELLSRMYDIERLSSKFAYKNV--NAKDLLSLKRSIEVLPALKKLLSSFSAQLLKEIYEG 387
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ L +Y L+ I+ + G ++++GF +E+D LR I +
Sbjct: 388 LD-------------TLEDIYALIDSSINEDAPVTLKEGGIIKDGFNEEVDRLRNISKNS 434
Query: 377 PEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E L + E L + +L I Y GY + + + ++ A
Sbjct: 435 KELLVQYEEKERNLTGIKNLR-------IGYNKVFGYYIEVTKSNYSLVPDRYIRKQTLA 487
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + ++L++ + K++++E + ++ I + + K +
Sbjct: 488 NAER--------YITEELKKLEDEILGADQKLIELEYQLFCEIRDRIEAQIERIQKTASN 539
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-D 551
A LD S A +A N Y+RP + L + I+NGRH + E + FIPNDT +D +
Sbjct: 540 IAILDVLCSFARIAIDNEYVRPNVYLGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAE 599
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
R+ IITGPN +GKS Y++QVALIV ++ +G FVPAD A +G+ D S +++
Sbjct: 600 NRVLIITGPNMAGKSTYMRQVALIVIMAQMGCFVPADEAYIGVVDKIFSRIGASDDISSG 659
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++ +V +L+ AT +SL + DE G+GT T DG+ + + Y + K L
Sbjct: 660 QSTFMVEMSEVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTL 719
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL E +P +K Y + V N I+FL ++V G SYG+H
Sbjct: 720 FATHYHELTELEERIPG---VKNYRVDVKEEGKN------IIFLRKIVRGGCDSSYGIHV 770
Query: 722 ALLAGVPAEVIKRAAYVL----EAAQNNKHVERWSHE 754
A LAG+P EV+KRA +L EA N K++ + E
Sbjct: 771 ARLAGIPEEVLKRAEEILKQLEEADINRKNIRKLRKE 807
>gi|160945081|ref|ZP_02092307.1| hypothetical protein FAEPRAM212_02600 [Faecalibacterium prausnitzii
M21/2]
gi|158442812|gb|EDP19817.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
M21/2]
Length = 871
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 193/651 (29%), Positives = 316/651 (48%), Gaps = 98/651 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ +VI + +F++L L++ +T + GR K G ++ +++K T MG+R
Sbjct: 258 LKTVITYNEAQFMRLSPVTRANLELTETLR-------GREKRG-TLLWVLDKTSTAMGKR 309
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSP 276
+LR+W +P++ +N RLNA+ + + L E L Y+ D+ ++ + +P
Sbjct: 310 MLRSWIEQPLISSPLINHRLNAVEALVRQTMVRGDLTEELHYIADLERLMTRTVYGSATP 369
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF-DIVEKAASCITTELAY 335
IYT L C L LR+Q N ++ E AAS L
Sbjct: 370 KEIYT-------LAQTCDRL-----------PGLRKQAEGCNCPELAELAASI--DPLED 409
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
+ + +D + G ++ +G+ E+DELR I + L ++ + L
Sbjct: 410 IKARIYAAVDPDAPSTLKDGGVIAKGYHAEVDELRSIRDNTKGVLAQLEA-------RLR 462
Query: 396 KEMFVPC--IVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+E +P I Y H GY + + ++ + +T + + + GE Y T
Sbjct: 463 QETGIPKLKIGYNHVFGYFIEVSNSYKNLVPETYIRKQ-------TLTSGER----YITQ 511
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +EL++ + + +++ +ER + +L+ I D + + N A+LD +LA VA +
Sbjct: 512 ELKELESKILGAHERLISLERRLFDELLESIGAQLDRIQRTANAIAQLDVLAALAQVAAE 571
Query: 511 NNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRID-NDGRINIITGPNYSGKSI 567
NNY RP++ +L I GRH V Q + F+PNDT ++ R IITGPN +GKS
Sbjct: 572 NNYCRPVVDDSDVLTITEGRHPVVEQVLKGSMFVPNDTTLNCTTDRCLIITGPNMAGKST 631
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
Y++Q ALI ++ IGSFVPA + VG+ D S + A QS+FM+++ +V +L+
Sbjct: 632 YMRQNALIALMAQIGSFVPAASCHVGVVDAIFTRIGASDDLAAGQSTFMVEMTEVAEILK 691
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC-----THLTELLN-E 673
AT++SL +LDE G+GT T DG+ + + + P K L C TH EL E
Sbjct: 692 NATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIAD---PAKGLGCKTLFATHYHELTELE 748
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
G + E +K Y ++V + EDI FL R+V G A SYG+ A LAG+P V +
Sbjct: 749 GTV---EGVKNYNIAVKK------RGEDITFLRRIVRGPADDSYGIEVAKLAGLPGSVTR 799
Query: 734 RAAYV---LEAAQNNKHVERWSHENISAQDQQYKNA------VEKMLAFDV 775
RA V LEA+ VE+ + + Q+Y + +EK+ A DV
Sbjct: 800 RAHEVLRTLEASAPKNKVEQMDFDAL----QEYNSPAVPSEMMEKLEAVDV 846
>gi|374296085|ref|YP_005046276.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
gi|359825579|gb|AEV68352.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
Length = 872
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 189/680 (27%), Positives = 328/680 (48%), Gaps = 90/680 (13%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
++ + ASG LL + LEQ + N + I S + + +++ LDA L++
Sbjct: 231 DIYINASGALL---------EYLEQTQKVNLN-HIQSFNKYKIEEYMILDAATRRNLELT 280
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + + G S+ ++++ +T MG R LR W +P++++ ++ RLNA+ F
Sbjct: 281 ETMREKNRKG--------SLLWVLDRTMTSMGGRTLRKWIEQPLINIYDIRDRLNAVREF 332
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ + E LK V DI ++ K S D + S+ + ++ + + +
Sbjct: 333 KDKFMVRMEVRELLKRVYDIERLMGKIVLGS--ANCRDLISLKNSLGQIPYIKSLLK-DL 389
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
+ESL R + DI L VYE++ I + G +++EG+ E+
Sbjct: 390 NESLN---RECDRDI---------DSLDDVYEIIDRAICDDPPVSVKEGGIIKEGYNKEV 437
Query: 367 DELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI--GYLMCIFEEKLDD 422
DELR+ + +L E+ + E + + +L K F Y ++ Y + +
Sbjct: 438 DELRRASVDGKSWLVELENREREKTGIKNL-KVGFNKVFGYYIEVTKSYFSLVPPNYIRK 496
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
TL + Y T + +E++ + +++++E + ++ S +
Sbjct: 497 QTLANCER----------------YITEELKEIEEKVLGAEDRLVELEYQLFVEVRSKVA 540
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--T 540
+ + + A++D SLA VA + +Y P + E ++ I +GRH + E +D
Sbjct: 541 SEINRIKRTAKALAQIDVICSLAEVADRESYTMPEVNNEDVIHIIDGRHPVVEKVIDQGA 600
Query: 541 FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
F+PNDT +D + +I IITGPN +GKS Y++QVALIV ++ IGSFVPA +A +G+ D
Sbjct: 601 FVPNDTYLDMAENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIF 660
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
S + A QS+FM+++ +V +L ATS+SL +LDE G+GT T DG+ + I +
Sbjct: 661 TRVGASDDLAAGQSTFMVEMSEVANILNNATSKSLLILDEIGRGTSTYDGLSIAWSVIEH 720
Query: 652 FV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
+ + L TH EL EG + + +K Y +SV EDI+FL +++
Sbjct: 721 ISDKKKIGARTLFATHYHELTELEGSI---DGVKNYCISV------EEKGEDIIFLRKII 771
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQNNKHVERWSHE-----------N 755
G A SYG+ A LAGVPA VI RA + LE + NK R+ +
Sbjct: 772 RGGADNSYGVQVARLAGVPAPVINRAKEILKELEESDINKRDARFKRAMKPIEGQIDVFS 831
Query: 756 ISAQDQQYKNAVEKMLAFDV 775
+AQ + Y ++++ + DV
Sbjct: 832 FNAQQRSYDEVLKELRSIDV 851
>gi|448457199|ref|ZP_21595694.1| DNA mismatch repair protein MutS [Halorubrum lipolyticum DSM 21995]
gi|445810780|gb|EMA60795.1| DNA mismatch repair protein MutS [Halorubrum lipolyticum DSM 21995]
Length = 930
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 302/642 (47%), Gaps = 81/642 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEALQ 184
SE+ +RA+G +L +E E+G + +I + + + +DAT L+
Sbjct: 236 SELAMRAAGAVLGYVE-----------ETGAGVLASITRLTAYGDDDHVAVDATTQRNLE 284
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + S EG S+F +++ VT G RLLR W RP D L RL+A+
Sbjct: 285 LTETMRGES--------EG-SLFETVDRTVTAAGGRLLREWLTRPRRDGAELTRRLDAVE 335
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHVNK 300
+ L ETL D+ + + S S + + D A + ++ +
Sbjct: 336 ALASAALARDRLRETLGDAYDLERLAARATSGSAGARELLSVRDSLALVPALADAVSGTA 395
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+ + ++ L I + A+ + ELA + + K K G L+RE
Sbjct: 396 LADSPVAAVLDR--------IDRERAATLHDELAAA-------LAEDPPKAKTQGGLLRE 440
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC--IF 416
G+ DELDEL +EE E+L+ +A E Q L H+ + YI Q+G + +
Sbjct: 441 GYDDELDELIASHEEAAEWLDTLAEREKRQYGLSHVTVDRNKTDGYYI-QVGKSVADQVP 499
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
E + TL+ + F +D E +R + R G++ +++ + A+
Sbjct: 500 EHYREIKTLKNSKRF---VTDELEEREREVLRLEEAR------GELEYELFE---ALRER 547
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
+ + L D + +AV AE+D SLA A N++ RP LT E LD++ GRH + E
Sbjct: 548 VAADAELLQD-VGRAV---AEIDALASLATHAAGNDWTRPELTDERRLDVEAGRHPVVER 603
Query: 537 TVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA +ATVGL D
Sbjct: 604 TTD-FVPNDLRLDGERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARSATVGLVD 662
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ +S+FM+++ ++ +L AT +SL +LDE G+GT T DGI +
Sbjct: 663 GIYTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVGRGTATYDGISIAWAA 722
Query: 649 INYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
Y +V + L TH EL LP + + V E + ++ FL
Sbjct: 723 TEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTFLRT 772
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 773 VRDGPTNRSYGVHVADLAGVPEPVVSRADTVLDRLREEKAIE 814
>gi|293368547|ref|ZP_06615155.1| DNA mismatch repair protein MutS [Bacteroides ovatus SD CMC 3f]
gi|292636344|gb|EFF54828.1| DNA mismatch repair protein MutS [Bacteroides ovatus SD CMC 3f]
Length = 872
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 295/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPPEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D N +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSNTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|73748908|ref|YP_308147.1| DNA mismatch repair protein MutS [Dehalococcoides sp. CBDB1]
gi|115299207|sp|Q3ZYA0.1|MUTS_DEHSC RecName: Full=DNA mismatch repair protein MutS
gi|73660624|emb|CAI83231.1| DNA mismatch repair protein MutS [Dehalococcoides sp. CBDB1]
Length = 858
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 183/639 (28%), Positives = 311/639 (48%), Gaps = 90/639 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G LL LE E +L+Q E + T D ++++D+ L+IF++
Sbjct: 227 ISAAGALLNYLE-ETQKSSLKQLERLSVYTTAD---------YMQMDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L ++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGILDQTKTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV----- 304
SL ++L + D+ + + + + + + S+ ++ +++ F +
Sbjct: 329 SLARTSLAKSLGQIADMERMANRIRQKTIL--PRELISLKNSLETVSAIHRQFGLMPPPR 386
Query: 305 ------GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
G+ + L E L ++N I + S + G G ++
Sbjct: 387 LAYFLNGL-KPLPEMLDIINKTITDDPPSTL-----------------------GDGKVI 422
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
R GF E+D+L + + FL ++ + E + K + + Y GY + I
Sbjct: 423 RAGFDPEMDKLCSLAGDARTFLSQMETRERERTG--IKSL---KLGYNRVFGYYIEISNA 477
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
L D E ++ ++ + TP+ +E +NL+ + ++L+ME + ++
Sbjct: 478 NLGDVPPEFIRKQTLVNAER--------FITPELKEYENLILNAKERLLEMETGLYEQVL 529
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEM 536
+ + F LL A LD + A VA +N+Y+RP+ E LDI+ GRH V Q +
Sbjct: 530 NQLGGFYSALLANATALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGL 589
Query: 537 TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+ ND + D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LT
Sbjct: 590 GYGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLT 649
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ +
Sbjct: 650 DRIFTRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQA 709
Query: 648 TINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + + K L TH EL+ LP R+K Y ++V S D ++VFL
Sbjct: 710 VVEYIHSQPSLTAKTLFATHYHELVELASYLP---RVKNYNIAV------SEDRGEVVFL 760
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+++VPG SYG+H A LAG+P VIKRA VL +N
Sbjct: 761 HKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTELEN 799
>gi|423290954|ref|ZP_17269803.1| DNA mismatch repair protein mutS [Bacteroides ovatus CL02T12C04]
gi|392664819|gb|EIY58356.1| DNA mismatch repair protein mutS [Bacteroides ovatus CL02T12C04]
Length = 872
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 295/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLINVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPPEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D N +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSNTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|91773655|ref|YP_566347.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
gi|121691668|sp|Q12VC9.1|MUTS_METBU RecName: Full=DNA mismatch repair protein MutS
gi|91712670|gb|ABE52597.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
Length = 887
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 294/591 (49%), Gaps = 65/591 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ +++ TPMG RLL+ W L+P++++++++ RL+A+ L + L +VK
Sbjct: 294 SILKVLDDTNTPMGGRLLQKWLLKPLINVDSIDHRLDALECLANDTMLRFDVRSHLSFVK 353
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL-----RLLNF 319
DI ++ + +Y S+ + SL V +I E + E L LL F
Sbjct: 354 DIERLIGRV-----VYGNSNARDLIALKRSLGSVPQIVESMGDDPGCEMLINIRDGLLGF 408
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
+ +E I + A V E + + + G ++R G+ ++LDEL+ + +
Sbjct: 409 EQLENIVKLI--DDAIVDEPPVSVRE---------GGMIRSGYNEKLDELKGMSTGGKTW 457
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL----DDTTLEQLQGFEFAF 435
+AS + + + + Y GY + I + + DD +Q
Sbjct: 458 ---IASFQQKERDRTGIKSL--KVGYNRVFGYYIEITKSNIAQIPDDYIRKQTM------ 506
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
FY TP+ +E ++++ KI +E + ++ S I + L +
Sbjct: 507 -----RNAERFY-TPELKEWEDVILSADEKITALENELFTEITSRIASHASDLQRIAVLI 560
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPNDTRID-NDGR 553
+LDC SLA VA NN++RP +T + + I+ GRH + E TV F+PNDT +D D +
Sbjct: 561 GQLDCTASLAEVAVNNNFVRPNITSDCKILIREGRHPVVEKTVRGGFVPNDTEMDCVDEQ 620
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQS 605
+ITGPN +GKS Y++QV+LIV ++ GSFVPA A++G+ D + + QS
Sbjct: 621 FLLITGPNMAGKSTYMRQVSLIVIMAQAGSFVPASHASIGIVDRVFTRVGAFDDLASGQS 680
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVC 664
+FM+++ ++ +L AT +SL LLDE G+GT T DG + + Y V + L
Sbjct: 681 TFMVEMVELANILNNATPKSLVLLDEIGRGTSTYDGYSIAKAVVEYIHNKGRVGVRSLFA 740
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH +L N K R+K Y ++V D +D+VFL ++VPG SYG+H A L
Sbjct: 741 THYHQLTNISSSLK--RVKNYHIAV------KEDGDDLVFLRKIVPGATDKSYGIHVARL 792
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA-VEKMLAFD 774
AGVP +V +RA VL+ ++ + S E+ S + ++ K+A +++ FD
Sbjct: 793 AGVPHKVTQRAKEVLQDIEDESVI---SKESDSKRGRKKKSAQYTQLMLFD 840
>gi|326202164|ref|ZP_08192034.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
gi|325987959|gb|EGD48785.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
Length = 873
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 316/636 (49%), Gaps = 88/636 (13%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
++ V ASG LL LE+ + V+ L ++ N +L +++ LDA++ L++
Sbjct: 231 DIAVNASGALLTYLESTQKVN-LSHIQNFNL---------YALEEYMILDASSRRNLELT 280
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + S G S+ +++K +T MG RLLR W +P+++ +++ RLNA+
Sbjct: 281 ETMREKSKKG--------SLLWVLDKTMTSMGGRLLRKWIEQPLINHGDISLRLNAVEEL 332
Query: 247 LCSEELMASL--HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI--- 301
+ MA + E LK V DI ++ K S D A SI + ++ +I
Sbjct: 333 --KNKFMARVEARELLKRVYDIERLMGKVILGSV--NCRDLIALKNSISQIPYIKEILNG 388
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
FE S EQL D +E + I I IID K G ++++G
Sbjct: 389 FETEYISSCYEQL-----DSLEDVCNLID----------ISIIDDPPVTIK-EGGIIKDG 432
Query: 362 FCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFE 417
+ E+D+LR + +++ E + E + +L K F Y ++ Y + E
Sbjct: 433 YNPEVDKLRSASIQGKDWIAALEASEREKTGIKNL-KVGFNRVFGYYIEVTKSYFSLVPE 491
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL-DNLLGDIYHKILDMERAITRD 476
E + TL + Y TP+ +E+ DN+LG KI+ +E ++
Sbjct: 492 EYIRKQTLANCER----------------YITPELKEIEDNILG-AEEKIVLLEYSLFVQ 534
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQE 535
+ I + AE+D SLA VA + Y +P +++ ++I +GRH V+++
Sbjct: 535 IKDKIAEQLSRIKSTARALAEIDVLASLAEVADREGYCKPEISVSDKIEIVDGRHPVVEK 594
Query: 536 MTVDT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
MT + F+PNDT +D + R+ IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +G
Sbjct: 595 MTDKSGFVPNDTVLDMEEDRLAIITGPNMAGKSTYMRQSALIVLMAQIGSFVPASSAKIG 654
Query: 594 LTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D S + + QS+FM+++ +V +L AT +SL +LDE G+GT T DG+ +
Sbjct: 655 LVDRIFTRVGASDDLASGQSTFMVEMSEVANILTNATKRSLLVLDEIGRGTSTFDGLSIA 714
Query: 646 GGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
I Y V+ + + + L TH EL EG L +K Y ++V +D++
Sbjct: 715 WAVIEYIVSKEQLGCRTLFATHYHELTELEGKLSG---IKNYCITV------KEKGDDVI 765
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
FL +++ G A SYG+ A LAGVP VI RA +L
Sbjct: 766 FLRKIIRGGADGSYGIQVAKLAGVPQGVIDRAKEIL 801
>gi|423214488|ref|ZP_17201016.1| DNA mismatch repair protein mutS [Bacteroides xylanisolvens
CL03T12C04]
gi|392692903|gb|EIY86139.1| DNA mismatch repair protein mutS [Bacteroides xylanisolvens
CL03T12C04]
Length = 872
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/608 (28%), Positives = 295/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLINVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACMEADNASLNRIG------EQLNLC-ISIRDRIAKEIKNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIQDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPPEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D N +I IITGPN +GKS
Sbjct: 567 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSNTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|295696238|ref|YP_003589476.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
gi|295411840|gb|ADG06332.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
Length = 879
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 283/587 (48%), Gaps = 70/587 (11%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +DA A L++ QT + G S+ ++++ VT MG RLLR W +P++
Sbjct: 253 YMAVDAFARRNLELVQTVREGRRTG--------SLLWLLDETVTAMGGRLLRQWLEKPLI 304
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + R + I + L E L+ V D+ +L + + S L++
Sbjct: 305 DPVAIARRQDGIEELVGEWIRRNQLREDLRRVYDLERLLGR------VSYGSAGPRDLRA 358
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L G++ + L DI + C E+ + + + +KE
Sbjct: 359 VAQSLSQAPKLAAGLAGAGSSIL----ADIERRLDPC--EEVRDLLDRALADDPPATAKE 412
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++R+GF ELDELR+ E + +A+LE + + I Y GY
Sbjct: 413 PG---VIRDGFSPELDELRRASREGRSW---IAALEQQERERTGIKSL--KIGYNRVFGY 464
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + + L E + A S+ Y TP+ +E+++ + D + +E
Sbjct: 465 YIEVTKANLALVPREYERRQTLAASER--------YVTPELKEMESRILDAQERAEAIEY 516
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ +L S + L + AELD +LA VA + Y RP++ +++I+ GRH
Sbjct: 517 QLFVELRSTVVKALPRLQRLAGAMAELDVLCALAEVAAKRRYTRPVVDDSSVIEIRGGRH 576
Query: 532 VLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + TF+PNDT +D D R+ +ITGPN +GKS Y++QVALIV L+ +GSFVPAD
Sbjct: 577 PVVEAVLPDGTFVPNDTFLDGDHRRVALITGPNMAGKSTYMRQVALIVLLAQVGSFVPAD 636
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A +G+ D + + A QS+FM+++ ++ +LR AT +SL +LDE G+GT T D
Sbjct: 637 FARIGIVDRLFTRIGAADDLVAGQSTFMVEMVELATILRNATPRSLIILDEIGRGTSTYD 696
Query: 641 GIGLLGGTINYF-VTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNS 696
G+ + + Y V + L TH LT L +E LP N S
Sbjct: 697 GMSIARAAVEYIHDPTRVGARTLFATHYHELTGLADE--LPGV-------------HNFS 741
Query: 697 TDVED----IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
T+V + IVFL+RLV A SYG+H A LAG+P ++++RA +L
Sbjct: 742 TEVREDSGGIVFLHRLVDRPADRSYGIHVARLAGLPEDLLERAEAIL 788
>gi|303228559|ref|ZP_07315387.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
gi|302516806|gb|EFL58720.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
Length = 873
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 277/554 (50%), Gaps = 61/554 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ ++++ +TPMG RLL+ W P+ D+ + R A++ + + L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQSYLDCIY 347
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D I+ + + S + D+T+ +S+ L H+ + + SL
Sbjct: 348 DFERIVGRIETGSV--SPRDFTSLRESLQVLPHIKNLLKEFSGLSL-------------- 391
Query: 325 AASCITTEL---AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
S I T + A +Y+L+ I + G ++R+G+ +ELDELR + +L+
Sbjct: 392 --SSINTRIDNHADIYDLLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQ 449
Query: 382 --EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
E + E L K Y GY + + ++D F + ++
Sbjct: 450 KLEDKAREETGLKLKTK--------YNKVFGYFFEVSKSQIDKVPAY----FIRKQTTVN 497
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
E Y TP +E + + KI+ +E+ + +DL + I + + AELD
Sbjct: 498 AER----YITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKVQETARALAELD 553
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINI 556
SLA VA+++NY+ P + L ++I++GRH + E + + F+PND ++ +D +
Sbjct: 554 VLASLATVAYESNYICPNIVLNGQINIRDGRHPVIEKFLKREVFVPNDVVLNHDDEEFML 613
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN +GKS Y++QVA+++ ++ IGSF+PA AT+ D S ++ QS+FM
Sbjct: 614 ITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDISTGQSTFM 673
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++ +V +L ATS+SL +LDE G+GT T DG+ + + + + + K L TH
Sbjct: 674 VEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHAKTLFATHYH 732
Query: 669 ELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL+ E P RLK YT++V +DI FL R++ G A SYG+H A LAG+
Sbjct: 733 ELIPLEDVYP---RLKNYTVAV------KEKGKDIAFLRRIIRGGADRSYGIHVAKLAGL 783
Query: 728 PAEVIKRAAYVLEA 741
PA+V+KRA +LE+
Sbjct: 784 PAQVLKRAEVILES 797
>gi|193213813|ref|YP_001995012.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
gi|193087290|gb|ACF12565.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
Length = 880
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/557 (29%), Positives = 280/557 (50%), Gaps = 61/557 (10%)
Query: 200 AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHET 259
A+EG ++ +++K VT MG RLL+ W RP + + +RL+A+ FL ++L A+L E
Sbjct: 299 AREG-TLIDVIDKTVTAMGARLLKKWVGRPSRRMSQIQNRLDAVEVFLTRKDLKANLREA 357
Query: 260 LKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF 319
K + D+ +L + I T + S+ L F+ + E +
Sbjct: 358 FKSICDMERVLAR------IATGRANPKEVLSLGGSLAQVPDFKAALLE--------IET 403
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
+V + + +T + E + I+ G ++REG+ ELDELR + E
Sbjct: 404 PLVAELQNGLTA-TPELTEEIFRAINPETPATLNDGNVIREGYNAELDELRSLAGSAKEM 462
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQI-GYLMCIFE---EKLDDTTLEQLQGFEFAF 435
L++V Q K V +++ GY + + + EK+ D +E
Sbjct: 463 LQKV------QADERKKTGISSLKVQFNRVFGYYIEVSKANSEKVPDY-------YEKKQ 509
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
+ ++ E Y P +E + + + + +E+ + L I ++ +
Sbjct: 510 TLVNAER----YTIPILKEYEEKILTAEERRITLEQELFSALRQRIAEDAETIQADAEHI 565
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVD-TFIPNDTRIDNDG 552
A LDC S A +A ++NY++P + ++DI+NGRH + E M +D ++PND R+D +
Sbjct: 566 ATLDCLCSYAELAEKSNYVKPEIHENDVIDIKNGRHPVLEKIMPIDRKYVPNDCRLDVET 625
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
R+ IITGPN SGKS +++QV LIV L+ GS+VPA++A++GL D S ++ A +
Sbjct: 626 RVQIITGPNMSGKSSFLRQVGLIVLLAQAGSYVPAESASIGLVDKIFTRVGASDNLAAGE 685
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+F++++++ +L T+QSL LLDE G+GT T DG+ + + F+ + K L
Sbjct: 686 STFLVEMNEAANILNNGTAQSLILLDEIGRGTSTYDGMS-IAWAMTEFIHDAIGAKTLFA 744
Query: 665 THLTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH EL L E + R+K + +V E+ ++FL ++V G A SYG+ A
Sbjct: 745 THYHELAELEEQLV----RVKNFNATVEETEDT------VIFLRKIVRGAADNSYGIEVA 794
Query: 723 LLAGVPAEVIKRAAYVL 739
+AG+P +VI RA +L
Sbjct: 795 KMAGLPDKVISRAKAIL 811
>gi|409198043|ref|ZP_11226706.1| DNA mismatch repair protein MutS [Marinilabilia salmonicolor JCM
21150]
Length = 873
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/602 (28%), Positives = 288/602 (47%), Gaps = 62/602 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++ LD L+IF S + G G S+ +++ VTPMG R
Sbjct: 256 ISSLSRIDEDKYVWLDRFTIRNLEIF------SSVNEG----GRSLTDIIDHSVTPMGSR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D++ + R + + F +L L L+ V D+ ++ K S
Sbjct: 306 LLKRWIALPLKDVQPIKDRQSVVEHFFKDPQLKMDLESQLRPVGDLERLVSKVASGRI-- 363
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
T + ++ S+ V ++ L +LN I + C+T + E +
Sbjct: 364 TPREMIQMRNALNSIEPVREL-------CLHADNDVLNH-IGGQLNPCVT-----IKERI 410
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + + G ++REG ELDELR I ++L E+ E + +
Sbjct: 411 EKEIMPDPPNQLNKGNVIREGVSKELDELRHIAFSGKDYLNELLKRETERTGITSLK--- 467
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + + GY + + D + ++ ++ Y T + +E + +
Sbjct: 468 --ISFNNVFGYYIEVRNTHKDKVPDDWIRKQTLVNAER--------YITEELKEYEAKIL 517
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
++L +E + L + F + N A +DC + A +A QNNY+RP++T
Sbjct: 518 GAEERMLVLETELFNALTVALADFIPAIQLNSNLLARIDCLVGFASLAAQNNYVRPVITE 577
Query: 521 EPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIV 576
E LDI+ GRH + E + + ++PND +DND + I IITGPN +GKS ++Q ALIV
Sbjct: 578 EDSLDIKAGRHPVIEKQLPAGEEYVPNDVYLDNDKQQIIIITGPNMAGKSALLRQTALIV 637
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA++AT+G+ D S +++ +S+FM+++++ +L T +SL L
Sbjct: 638 LMAQIGSFVPAESATIGVVDKIFTRVGASDNISLGESTFMVEMNEASSILNNLTPRSLVL 697
Query: 629 LDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYT 686
DE G+GT T DGI + + Y K L TH EL E P R K +
Sbjct: 698 FDELGRGTSTYDGISIAWSIVEYIHENTRARAKTLFATHYHELNEMEKSFP---RCKNFN 754
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-EAAQNN 745
+SV +N ++FL +LVPG + S+G+H A +AG+P V+KRA +L E NN
Sbjct: 755 VSVKEVDNK------VIFLRKLVPGGSEHSFGIHVARMAGMPPSVVKRANEILGELETNN 808
Query: 746 KH 747
+
Sbjct: 809 RQ 810
>gi|270295058|ref|ZP_06201259.1| DNA mismatch repair protein MutS [Bacteroides sp. D20]
gi|270274305|gb|EFA20166.1| DNA mismatch repair protein MutS [Bacteroides sp. D20]
Length = 871
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 297/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + NK+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 VTSLARIEENKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K+ C SL H+ + ++ I +S+R++
Sbjct: 363 REVVALKVALQAIEPIKAACMDADNASLNHIGE--QLNICQSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELR+I ++L ++ E
Sbjct: 407 -IDREIDNDPPLLIN-----------KGGVIKSGVSAELDELRRIAYSGKDYLLQIQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L ++P L I Y + GY + + D E ++ A ++
Sbjct: 455 SELTEIPSLK-------IGYNNVFGYYIEVRNTHKDKVPAEWIRKQTLANAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYAELVQSLSEFIPAIQINANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPN 561
A +NNY+RP++ + +L+I GRH + E + + +I ND +D+ + I IITGPN
Sbjct: 560 TAARENNYIRPVIADDDVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSQTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L + +SL L DE G+GT T DGI + + + + L TH E LN
Sbjct: 680 AADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 790
Query: 732 IKRAAYVLE 740
+KRA +L+
Sbjct: 791 VKRANDILK 799
>gi|333377034|ref|ZP_08468770.1| DNA mismatch repair protein mutS [Dysgonomonas mossii DSM 22836]
gi|332886247|gb|EGK06491.1| DNA mismatch repair protein mutS [Dysgonomonas mossii DSM 22836]
Length = 870
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L+I T M G G S+ +++K V+PMG R
Sbjct: 253 ITSLSRIEEDKYVRLDKFTVRSLEIIST------MNEG----GKSLLDILDKTVSPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D++ +NSRL+ + +F EL L E L + D+ I+ K SP
Sbjct: 303 MLRRWLVFPLKDVKPINSRLSVVEYFFKDIELKTLLEEQLALIGDLERIISKVAVNRVSP 362
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN-----FDIVEKAASCITT 331
I LK+I + + F SLRE LN D +EK
Sbjct: 363 REIV---QLKVALKAIEPIRNA---FLASDEPSLREIGERLNPCPVIHDRIEKEVQPDPP 416
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
L +N+ G ++R+G ELDELR I ++L L++ Q
Sbjct: 417 SL------------INK------GNIIRKGVNPELDELRDIAYSGKDYL-----LKIQQR 453
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ I + + GY + + D +G+ + ++ E Y T +
Sbjct: 454 ETEATGISSLKISFNNVFGYYIEVRNTHKDKVP----EGWIRKQTLVNAER----YITQE 505
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KI +E + +LV I + + + A+ DC LS + VA +N
Sbjct: 506 LKEYEEKILGAEEKIQALESNLFNELVLSIVEYIPAIQANASLIAQTDCLLSFSKVAKEN 565
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSI 567
Y+RP + +L I+NGRH + E + +++I ND +D N +I IITGPN +GKS
Sbjct: 566 KYIRPEINDTDVLKIKNGRHPVIEKQLPLGESYIANDVSLDSNKQQIIIITGPNMAGKSA 625
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI ++ GSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 626 LLRQTALITLMAQAGSFVPAESAQIGLVDKIFTRVGASDNISVGESTFMVEMNEASDILN 685
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+ +SL L DE G+GT T DGI + + Y K L TH E LNE + K
Sbjct: 686 NLSPKSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKARAKTLFATHYHE-LNE--MEK 742
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K + +SV +N ++FL +LVPG + S+G+H A +AG+P ++KRA
Sbjct: 743 SFKRIKNFNVSVKEIDNK------VIFLRKLVPGGSEHSFGIHVAKMAGMPQSIVKRANS 796
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 797 ILKQLESD 804
>gi|210612717|ref|ZP_03289432.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
gi|210151410|gb|EEA82418.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
Length = 875
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 196/674 (29%), Positives = 321/674 (47%), Gaps = 88/674 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
A+G LL L E +++ A +T +I + K++ LD+++ L++ +T +
Sbjct: 230 AAGALLQYL--------YETQKTSLAHLT--GIISYTTGKYMLLDSSSRRNLELCETLRE 279
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
G S+ +++K T MG R LR++ +P++ E + RL+A+
Sbjct: 280 KQKRG--------SLLWVLDKTKTAMGARTLRSFVEQPLIHKEEVIKRLDAVGELKDDAI 331
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR 311
+ E L V D+ ++ K + S D AF S+ L H+ I + L+
Sbjct: 332 SREEIREYLTPVYDLERLISKISYQSA--NPRDLIAFKSSLEMLPHIKYILGDMKTPLLK 389
Query: 312 EQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQ 371
E L D +E+ I + L + KE G +++EG+ ++D+LR
Sbjct: 390 ELYEEL--DTLEELCQLIQHAICEEPPLAM--------KE---GGIIKEGYHPDVDKLRN 436
Query: 372 IYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
E +L E+ + E + +L I Y GY + + + ++L
Sbjct: 437 AKTEGKTWLAELETEEREKTGIKNLK-------IKYNKVFGYYLEV------TNSYKELV 483
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI---TRDLVSHICLFSD 486
+ +R Y P+ +EL++ + K+ +E + RD ++ +
Sbjct: 484 PDYYTRKQTLANAER--YIIPRLKELEDTILGAEDKLYALEYELYCNVRDTIADEVVRIQ 541
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPN 544
KA+ A++D F SLALVA +NNY+RP + + ++DI+NGRH + E + D FI N
Sbjct: 542 KTAKAI---AQIDVFASLALVAERNNYVRPKINEKGVIDIKNGRHPVVEKMIPNDMFIAN 598
Query: 545 DTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
DT +D+ R++IITGPN +GKS Y++Q ALIV ++ IGSFVPA+ A +G+ D
Sbjct: 599 DTYLDDKKNRVSIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAETANIGIVDRIFTRVG 658
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT T DG+ + + +
Sbjct: 659 ASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEHISNG 718
Query: 656 D-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHA 713
+ K L TH EL EG K + + Y ++V +DIVFL ++V G A
Sbjct: 719 KLLGAKTLFATHYHELTELEG---KIDSVNNYCIAV------KEKGDDIVFLRKIVKGGA 769
Query: 714 LLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEK---- 769
SYG+ A LAGVP VI RA ++ R +IS Q K ++K
Sbjct: 770 DKSYGIQVAKLAGVPESVIARAKEIVSELSEADITTRV--RDISVQSGDTKKKMKKYDEV 827
Query: 770 ----MLAFDVLKGD 779
M FD +K D
Sbjct: 828 DLAQMSLFDTVKDD 841
>gi|338733719|ref|YP_004672192.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
gi|336483102|emb|CCB89701.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
Length = 864
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 180/676 (26%), Positives = 308/676 (45%), Gaps = 97/676 (14%)
Query: 104 GMDDGLSIKERICY-----------LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQK 152
+ D + + R CY L+ G + A+G LL+ L++E
Sbjct: 196 NVKDDWNFEHRTCYNWLTNHFQVHNLDGFGLQGKVAAINATGALLSYLQDE--------- 246
Query: 153 ESGNASITIDSVIEVSLN---KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGM 209
S+++D + ++ L+ ++ +D L++ + P H R + ++ +
Sbjct: 247 ----LSLSVDHIKQIKLDHLSSYMSIDRATQRNLELTE----PLH----RGSKSCTLLKL 294
Query: 210 MNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHI 269
+++ VTPMG RLL++W + P+L + + R + I L ++ L E L+ ++D+ +
Sbjct: 295 LDRTVTPMGARLLKSWVIHPLLSPQKIQKRQDGIEELLNKQKEARLLREDLQNIRDLERL 354
Query: 270 LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCI 329
+ + ++ T D + S+ ++ S+RE L +++ S +
Sbjct: 355 IMRIST--GYSTPRDLSGLRFSLENI------------PSVREHLTPFQAILMQTLLSHL 400
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF-------LEE 382
+ + ++D K G G ++R GF ELDELR + + L+E
Sbjct: 401 PDPSEITHAIQTTLVDEPPIK-MGEGKVIRPGFNAELDELRSLKANSQSWIANYQAELKE 459
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET 442
++ ++ I Y GY CI + + Q +F
Sbjct: 460 ATGIKTLK------------ITYSKAFGY--CI------EVSRGQADKMPSSFQRRQTLI 499
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
+ +P+ + + + KI +E+++ + L I + K A LDC L
Sbjct: 500 NSERFISPELKAYEEKILTAEEKIQALEQSLYQTLRKMIAKHLPTVKKIAKAIANLDCLL 559
Query: 503 SLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINIITG 559
+L VA NNY RP++ L IQ GRH + E ++ D+FIPNDT + + ++ +ITG
Sbjct: 560 ALMHVARDNNYCRPLIDDSDTLYIQKGRHPVIEASLFDDSFIPNDTHLSQKECQLMLITG 619
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDL 611
PN +GKS YI+QVALI ++ IGS+VPA +A +G+ D S + QS+FM+++
Sbjct: 620 PNMAGKSTYIRQVALIAIMAQIGSYVPAHSARIGIIDKVFSRIGASDDLARGQSTFMVEM 679
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPP-KVLVCTHLTEL 670
+ +L A+ +SL +LDE G+GT T DGI + + +T K L TH E
Sbjct: 680 TETANILNNASPRSLVILDEIGRGTSTYDGISIAWAVAEHLLTLRGEGVKTLFATHYWE- 738
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
L E L ER +V E + + IVFL +++PG SYG+H A LAG+P
Sbjct: 739 LTELAL---ERKGILNFNVAVKETS----DSIVFLRKIIPGCTDKSYGIHVARLAGLPHS 791
Query: 731 VIKRAAYVLEAAQNNK 746
IKRA L +N +
Sbjct: 792 AIKRAQEKLRQLENKE 807
>gi|336397760|ref|ZP_08578560.1| DNA mismatch repair protein MutS [Prevotella multisaccharivorax DSM
17128]
gi|336067496|gb|EGN56130.1| DNA mismatch repair protein MutS [Prevotella multisaccharivorax DSM
17128]
Length = 891
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 165/600 (27%), Positives = 288/600 (48%), Gaps = 73/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K++++D +L++ Q + ++G S+ ++++ +TPMG R
Sbjct: 270 ITSLKRLEEEKYVRMDKFTIRSLELLQPMQ----------EDGKSLLDVIDRTITPMGGR 319
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ ++N RL+ + +F + + + E L V D+ I+ K +P
Sbjct: 320 LLRRWMVFPLKDVRHINDRLDVVEYFFKAPDFRQVIDEQLHRVGDLERIISKVAVGRVTP 379
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ TA +KS C + + +G +L E LR D +EK +L
Sbjct: 380 REVVQLKTALQAIQPIKSACLYANNGSLKRLGEQMNLCESLR----DRIEKEIQPDPPQL 435
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ EGF ELD+LR I ++L LE+ Q
Sbjct: 436 V------------------SKGDVIAEGFSTELDQLRHISRGGKDYL-----LEIQQREA 472
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ + Y + GY + + D + ++ A ++ Y TP+ +
Sbjct: 473 EKTGITSLKVGYNNVFGYYLEVRNTFKDHVPADWIRKQTLAQAER--------YITPELK 524
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+ + + KIL++E + +L+ + F + N A +DC LS A V+ N Y
Sbjct: 525 QYEEKILGADEKILELEAQLFSELIVDMQEFIPQIQINANILAHIDCVLSFAKVSEDNAY 584
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYI 569
+RP++ +LDI+ GRH + E + + ++PND +D + ++ +ITGPN +GKS +
Sbjct: 585 VRPVVDDTTVLDIRQGRHAVIETQMPLGERYVPNDVYLDTEKQQVMMITGPNMAGKSALL 644
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +G FVPA++A VGL D S +++ +S+FM+++ + +L
Sbjct: 645 RQTALIVLLAQMGCFVPAESARVGLVDKIFTRVGASDNLSLGESTFMVEMTEAADILNNV 704
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSE 680
+S SL L DE G+GT T DGI + + Y + L TH E LNE +
Sbjct: 705 SSHSLVLFDELGRGTSTYDGISIAWAIVEYLHEHRGSQARTLFATHYHE-LNE-MEKHFQ 762
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R+K Y ++V ++FL +L PG + S+G+H A +AG+P +++RA VL+
Sbjct: 763 RIKNYNVAVKEIGGK------VIFLRKLTPGGSEHSFGIHVAEIAGMPRSIVRRANEVLK 816
>gi|333978769|ref|YP_004516714.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822250|gb|AEG14913.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
Length = 868
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 167/619 (26%), Positives = 297/619 (47%), Gaps = 70/619 (11%)
Query: 133 SGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP 192
+GG+L L+ +++E G I+ V S +++ LD L++ + +
Sbjct: 234 AGGMLNYLK------ATQKRELGQ----INRVEIYSGGQYMHLDGVTRRNLELTSSLRDG 283
Query: 193 SHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL 252
S G ++ +++ VT MG RLL++W RP+LD++ + +R +A+ +
Sbjct: 284 SRWG--------TLLWVLDHTVTAMGGRLLKSWLERPLLDVQAIRARQDAVEELVNDSLA 335
Query: 253 MASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLLHVNKIFEVGISESL 310
L LK + D L++ +S TA D A S+ L V K+ L
Sbjct: 336 RQELQHLLKTIYD----LERLSSRVVYGTAGPRDLLALKNSLAVLPKVKKVL-CNKKAPL 390
Query: 311 REQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
+++ + D +E V +L+ ID + G ++REG+ E+D LR
Sbjct: 391 WQEI-AGDLDCLED-----------VVQLLDEAIDADPPAGSREGGIIREGYHPEVDRLR 438
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
Q E +L ++ + E + + + + GY + + LD + ++
Sbjct: 439 QASREGKNWLAQLEAREKERTGIRSLK-----VGFNKVFGYYLEVTRPNLDLVPADYIRK 493
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
A ++ + TP+ +EL+ + +++ +E + ++ + + +
Sbjct: 494 QTLAGAER--------FITPELKELEEQILGAEERLVQLEYRLFTEIREKVAAQVRRIQQ 545
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRI 548
A A D LSLA A + NY+RP + + I+ GRH + E ++ F+PND +
Sbjct: 546 AAGAVARTDALLSLAEAAVKGNYVRPEVNDGSRITIREGRHPVVEQVLEPGEFVPNDVDL 605
Query: 549 DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHM 600
D R+ ++TGPN +GKS Y++QVAL+V ++ +GSF+PA + +G+ D S +
Sbjct: 606 GGDTRLILLTGPNMAGKSTYMRQVALLVLMAQVGSFIPAASGEIGIVDRIFTRVGASDDL 665
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPK 660
A QS+FM+++ + +++ AT +SL ++DE G+GT T DGI + + Y V + +
Sbjct: 666 AAGQSTFMVEMSECQVIVSAATPRSLIIMDEVGRGTSTYDGISIARALVEYIVR-RIGAR 724
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH EL LP +K +T++V E ED+VFL R+ PG A SYG+
Sbjct: 725 TLFSTHYHELTELDVLPG---VKNFTVAV---EERG---EDVVFLRRVRPGRADRSYGIQ 775
Query: 721 CALLAGVPAEVIKRAAYVL 739
A LAG+P E+++RA +L
Sbjct: 776 VARLAGLPGEILQRAEEIL 794
>gi|218132528|ref|ZP_03461332.1| hypothetical protein BACPEC_00387 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992638|gb|EEC58640.1| DNA mismatch repair protein MutS [[Bacteroides] pectinophilus ATCC
43243]
Length = 884
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 185/635 (29%), Positives = 307/635 (48%), Gaps = 77/635 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ +D+++ L++ +T + G S+ +++K T MG R LR +P+
Sbjct: 265 KYMLIDSSSRRNLELVETLREKQKRG--------SLLWVLDKTKTAMGARRLRAMIEQPL 316
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
+D + + +R + I+ F + + E L V D+ ++ K + + D AF
Sbjct: 317 IDHDEIINRQDVIAEFNDNVITREEIREYLNPVYDLERLMSKISCRTA--NPRDLLAFRS 374
Query: 291 SICSLLHVN---KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
S+ L +V K F + + + E+L L DI + S I + V
Sbjct: 375 SLQMLPYVKDLIKPFNSVLMQKIYEKLDPLE-DIYQLIDSAIVDDPPIVLR--------- 424
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G +++EG+ + DELR+ + +L + E Q K + V Y
Sbjct: 425 ------EGGIIKEGYNAQADELRKAKTDGKTWLAGLEEREKEQTG--IKNLRVK---YNK 473
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + D ++ + ++ Y T + + L++++ K+
Sbjct: 474 VFGYYLEVTNSYKDLVPDNWVRKQTLSNAER--------YTTEELKNLEDVILGAEDKLY 525
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
+E + D+ I + AE+D F SLALVA QNNY+RP + + L+DI+
Sbjct: 526 ALEYDLFVDVRDKIASQVMRIQSTAKAIAEIDVFASLALVAEQNNYVRPKINDKGLIDIK 585
Query: 528 NGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+GRH + E + D FI NDT +DN+ RI+IITGPN +GKS Y++Q ALIV ++ +GSF
Sbjct: 586 DGRHPVVEKMISNDMFIANDTLLDNNANRISIITGPNMAGKSTYMRQTALIVLMAQVGSF 645
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +A +G+ D S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT
Sbjct: 646 VPASSANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDEIGRGT 705
Query: 637 LTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T DG+ + + + + + K L TH EL EG L + Y ++V
Sbjct: 706 STFDGLSIAWAVVEHISNKNLLGAKTLFATHYHELTELEGTLGG---VNNYCIAV----- 757
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL------EAAQNNKHV 748
+DIVFL ++V G A SYG+ A LAGVP VI RA ++ + +Q K +
Sbjct: 758 -KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIARAKELVNDLSDADISQKAKEI 816
Query: 749 ERWSHENISAQDQQY--KNAVE--KMLAFDVLKGD 779
++ + D++Y KN +E +M FD K D
Sbjct: 817 AQYDKKK---PDEKYIRKNELEVNQMSLFDTAKDD 848
>gi|255693596|ref|ZP_05417271.1| DNA mismatch repair protein MutS [Bacteroides finegoldii DSM 17565]
gi|260620662|gb|EEX43533.1| DNA mismatch repair protein MutS [Bacteroides finegoldii DSM 17565]
Length = 905
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 287 ITSLSRIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 336
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + ++ RLN + +F + A + E L + D+ I+ K SP
Sbjct: 337 LLKRWMVFPLKDKKPIDERLNVVEYFFRQPDFKAVIEEQLHLIGDLERIISKVAVGRVSP 396
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + ++G EQL L C+T
Sbjct: 397 REVVQLKVALQAIEPIKLACIQADNASLNQIG------EQLNL-----------CVT--- 436
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQL 391
+ + + I + G ++++G +LDELR+I ++L ++ E L +
Sbjct: 437 --IRDRIAKEIKNDPPLAVNKGGVIQDGVNADLDELRRISYSGKDYLLQIQQRESELTGI 494
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ ++ Y T +
Sbjct: 495 PSLK-------VAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 539
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 540 LKEYEEKILGAEDKILILETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 599
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RPI+ +LDI+ GRH + E + + +I ND +D+D +I IITGPN +GKS
Sbjct: 600 RYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSA 659
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 660 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 719
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 720 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 776
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 777 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 830
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 831 ILKQLESD 838
>gi|409912343|ref|YP_006890808.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens KN400]
gi|298505934|gb|ADI84657.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens KN400]
Length = 871
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 281/595 (47%), Gaps = 62/595 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+FL LD ++ L++ T IG K S+ G++++ VT MG R L+ W P
Sbjct: 265 QEFLVLDESSRRNLELNAT--------IGDGKRRGSLLGLLDRTVTAMGGRKLKQWINYP 316
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++ +E +N RL+A+ + E + L V D+ + + + S +A D A
Sbjct: 317 LVSIEKINERLDAVEELVADAEFRQGVRAALDGVYDLERLNGRISLAS--ASAKDLVALR 374
Query: 290 KSICSLLHVNKIFEVGIS---ESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
S+ L + + S LR+ + LL D+ E I + +V
Sbjct: 375 ASLVRLPSLIALLTPAASTLLARLRDGIDLLA-DVEELIGRGIVPDPPFVLR-------- 425
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G ++ +G+ ELDELR I E F+ + + E + + + Y
Sbjct: 426 -------EGGIIAQGYHSELDELRSISREGKGFIARLEAQEKAR-----TGISSLKVRYN 473
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + L + ++ A ++ + TP+ +E + + +I
Sbjct: 474 KVFGYYIEVTKSNLSAIPDDYIRRQTLANAER--------FITPELKEYEEKVLGAEDRI 525
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E A+ +D+ + + + + + A LD +LA VAH + Y+RP + + +
Sbjct: 526 VELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHDHRYVRPTVDEGDAIVV 585
Query: 527 QNGRHVLQEM--TVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
GRH + E + F+ ND ++DN + ++ IITGPN +GKS +++QVALIV ++ GS
Sbjct: 586 TGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQVALIVLMAQTGS 645
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD A++G+ D S ++ QS+FM+++ + +LR AT +SL +LDE G+G
Sbjct: 646 FVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPRSLVVLDEIGRG 705
Query: 636 TLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ + Y T K L TH EL R + +V E
Sbjct: 706 TSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELAVT----RNRVKNCNVAVKEW 761
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
N + ++FL ++V G A SYG+ A LAG+P EVI+RA +L + ++ E
Sbjct: 762 N----DQVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNLEKGEYAE 812
>gi|224537020|ref|ZP_03677559.1| hypothetical protein BACCELL_01896 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223186|ref|ZP_17209655.1| DNA mismatch repair protein mutS [Bacteroides cellulosilyticus
CL02T12C19]
gi|224521387|gb|EEF90492.1| hypothetical protein BACCELL_01896 [Bacteroides cellulosilyticus
DSM 14838]
gi|392639287|gb|EIY33112.1| DNA mismatch repair protein mutS [Bacteroides cellulosilyticus
CL02T12C19]
Length = 872
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 312/653 (47%), Gaps = 102/653 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDKTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D+ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWLVFPLKDVLPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIYT---ASDWTAFLKSIC---SLLHVNKIFE-VGISESLREQLRLLNFDIVEKAASCI 329
+ A +K C +N+I E + I +S+R++ I
Sbjct: 364 REVVALKVALQAIEPIKEACLEADNASLNRIGEQLNICKSIRDR---------------I 408
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-- 387
E+ L+I G +++ G ELDELRQI ++L ++ E
Sbjct: 409 EKEINNDPPLLIN-----------KGGVMKSGVNAELDELRQIAYSGKDYLLQIQQRESE 457
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
L ++P L I Y + GY + + D E ++ A ++ Y
Sbjct: 458 LTEIPSLK-------IGYNNVFGYYIEVRNTHKDKVPQEWIRKQTLANAER--------Y 502
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
T + +E + + KIL +E + +LV + F + N A LDC LS A V
Sbjct: 503 ITQELKEYEEKILGAEDKILILETQLYMELVQALSEFIPAIQVNANQIARLDCLLSFANV 562
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYS 563
A +NNY+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +
Sbjct: 563 ARENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVVLDSSSQQIIIITGPNMA 622
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 623 GKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAA 682
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEG 674
+L +S+SL L DE G+GT T DGI + + + + L TH E LNE
Sbjct: 683 DILNNLSSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE- 740
Query: 675 CLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
+ KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++K
Sbjct: 741 -MEKSFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVK 793
Query: 734 RAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRL-FFQ 785
RA +L + + A ++Q A + M +G ++L FFQ
Sbjct: 794 RANDIL--------------KQLEADNRQQGIASKPMAEVGETRGGMQLSFFQ 832
>gi|39996921|ref|NP_952872.1| DNA mismatch repair protein MutS [Geobacter sulfurreducens PCA]
gi|48428288|sp|P61667.1|MUTS_GEOSL RecName: Full=DNA mismatch repair protein MutS
gi|39983809|gb|AAR35199.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens PCA]
Length = 871
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 281/595 (47%), Gaps = 62/595 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+FL LD ++ L++ T IG K S+ G++++ VT MG R L+ W P
Sbjct: 265 QEFLVLDESSRRNLELNAT--------IGDGKRRGSLLGLLDRTVTAMGGRKLKQWINYP 316
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++ +E +N RL+A+ + E + L V D+ + + + S +A D A
Sbjct: 317 LVSIEKINERLDAVEELVADAEFRQGVRAALDGVYDLERLNGRISLAS--ASAKDLVALR 374
Query: 290 KSICSLLHVNKIFEVGIS---ESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
S+ L + + S LR+ + LL D+ E I + +V
Sbjct: 375 ASLVRLPSLIALLTPAASTLLARLRDGIDLLA-DVEELIGRGIVPDPPFVLR-------- 425
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G ++ +G+ ELDELR I E F+ + + E + + + Y
Sbjct: 426 -------EGGIIAQGYHSELDELRSISREGKGFIARLEAQEKAR-----TGISSLKVRYN 473
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + L + ++ A ++ + TP+ +E + + +I
Sbjct: 474 KVFGYYIEVTKSNLSAIPDDYIRRQTLANAER--------FITPELKEYEEKVLGAEDRI 525
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E A+ +D+ + + + + + A LD +LA VAH + Y+RP + + +
Sbjct: 526 VELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHDHRYVRPTVDEGDAIVV 585
Query: 527 QNGRHVLQEM--TVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
GRH + E + F+ ND ++DN + ++ IITGPN +GKS +++QVALIV ++ GS
Sbjct: 586 TGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQVALIVLMAQTGS 645
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD A++G+ D S ++ QS+FM+++ + +LR AT +SL +LDE G+G
Sbjct: 646 FVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPRSLVVLDEIGRG 705
Query: 636 TLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ + Y T K L TH EL R + +V E
Sbjct: 706 TSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELAVT----RNRVKNCNVAVKEW 761
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
N + ++FL ++V G A SYG+ A LAG+P EVI+RA +L + ++ E
Sbjct: 762 N----DQVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNLEKGEYAE 812
>gi|168186343|ref|ZP_02620978.1| DNA mismatch repair protein MutS [Clostridium botulinum C str.
Eklund]
gi|169295697|gb|EDS77830.1| DNA mismatch repair protein MutS [Clostridium botulinum C str.
Eklund]
Length = 908
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 298/609 (48%), Gaps = 57/609 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L++ +T + S G S+ +++K T MG RLLR W +P++
Sbjct: 259 YLSIDINSRRNLELTETLRDKSKKG--------SLLWVLDKTSTAMGARLLRKWVEQPLI 310
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
E + +R NA+ L + L+ L LK V DI + K +S + A + + S
Sbjct: 311 HKEIIENRQNAVEEILNNVPLLDDLRNALKDVYDIERLAGKISSKNV--NAKELLSLKNS 368
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
I +L + KI E + L+ +N D +E S + + L I KE
Sbjct: 369 IGNLPLIKKIIEYYNTNLLKNIH--VNLDCLEDIYSLLDNSILDSPALSI--------KE 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G+ +DELR E+ +ASLE + + + Y GY
Sbjct: 419 ---GGIIKDGYNSTIDELRMAKSHGTEW---IASLE--EQERNVTGIKSLKVKYNKVFGY 470
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + + LD Q+ + +R TP+ +E+++ + K++++E
Sbjct: 471 YIEVTKSNLD-----QVPENRYTRKQTLANCERFI--TPELKEVEDKILGAQEKLMELEY 523
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
I ++ I + A + +D SLA+VA +NNY +P + L+ L I+ GRH
Sbjct: 524 NIFIEIRELIEKEIYRIKNAAKLVSTIDVLQSLAIVALENNYSKPKIKLDGELLIKEGRH 583
Query: 532 VLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + D+F+ NDT +DN D ++ +ITGPN +GKS Y++QVALI LS IGSFVPA
Sbjct: 584 PVVEQMIPRDSFVSNDTILDNKDHQLLLITGPNMAGKSTYMRQVALITLLSQIGSFVPAK 643
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+ + D S + +S+FM+++ +V +L AT++SL LLDE G+GT T D
Sbjct: 644 EVEIVICDKIFTRIGASDDLARGKSTFMVEMWEVANILNNATNKSLILLDEVGRGTSTYD 703
Query: 641 GIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
G+ + I Y ++ K L TH EL + EG K +K Y++SV + +
Sbjct: 704 GLSIAWAVIEYICKNNNLKSKTLFATHYHELTSLEG---KIRGVKNYSISVKKVD----- 755
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
+DI+FL +++ G A SYG+ A LAGVP+ V RA +L + + + IS
Sbjct: 756 -DDIIFLRKIIEGGADESYGIEVAKLAGVPSVVTDRAKEILNTLEEDSPQNSNISKQISN 814
Query: 759 QDQQYKNAV 767
D K+++
Sbjct: 815 TDDTLKSSI 823
>gi|295105666|emb|CBL03210.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
SL3/3]
Length = 871
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 316/651 (48%), Gaps = 98/651 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ +VI + +F++L L++ +T + GR K G ++ +++K T MG+R
Sbjct: 258 LKTVITYNEAQFMRLSPVTRANLELTETLR-------GREKRG-TLLWVLDKTSTAMGKR 309
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSP 276
+LR+W +P++ + +N RLNA+ + + L E L Y+ D+ ++ + +P
Sbjct: 310 MLRSWIEQPLISSQLINHRLNAVEALVRQTMVRGDLTEELHYIADMERLMTRTVYGSATP 369
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF-DIVEKAASCITTELAY 335
IYT L C L LR+Q + ++ E AAS L
Sbjct: 370 KEIYT-------LAQTCDRL-----------PGLRKQAEGCSCPELAELAASI--DPLED 409
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
+ + +D G ++ +G+ E+DELR I + L ++ + L
Sbjct: 410 IKARIYAAVDPEAPSTLKDGGVIAKGYHAEVDELRSIRDNTKGVLAQLEA-------RLR 462
Query: 396 KEMFVPC--IVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+E +P I Y H GY + + ++ + +T + + + GE Y T
Sbjct: 463 QETGIPKLKIGYNHVFGYFIEVSNSYKNLVPETYIRKQ-------TLTSGER----YITQ 511
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +EL++ + + +++ +ER + +L+ I D + + N A+LD +LA VA +
Sbjct: 512 ELKELESKILGAHERLISLERRLFDELLESIGAQLDRIQRTANAIAQLDVLAALAQVAAE 571
Query: 511 NNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRID-NDGRINIITGPNYSGKSI 567
NNY RP++ +L I GRH V Q + F+PNDT ++ R IITGPN +GKS
Sbjct: 572 NNYCRPVVDDSDVLTITEGRHPVVEQVLKGSMFVPNDTTLNCTTDRCLIITGPNMAGKST 631
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
Y++Q ALI ++ IGSFVPA + VG+ D S + A QS+FM+++ +V +L+
Sbjct: 632 YMRQNALIALMAQIGSFVPAASCHVGVVDAIFTRIGASDDLAAGQSTFMVEMTEVAEILK 691
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC-----THLTELLN-E 673
AT++SL +LDE G+GT T DG+ + + + P K L C TH EL E
Sbjct: 692 NATAKSLVVLDEIGRGTSTFDGMSIARAVVEHIAD---PAKGLGCKTLFATHYHELTELE 748
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
G + E +K Y ++V + EDI FL R+V G A SYG+ A LAG+P V +
Sbjct: 749 GTV---EGVKNYNIAVKK------RGEDITFLRRIVRGPADDSYGIEVAKLAGLPGSVTR 799
Query: 734 RAAYV---LEAAQNNKHVERWSHENISAQDQQYKNA------VEKMLAFDV 775
RA V LEA+ VE+ + + Q+Y + +EK+ A DV
Sbjct: 800 RAHEVLRTLEASAPKNKVEQMDFDAL----QEYNSPAVPSEMMEKLEAVDV 846
>gi|57234006|ref|YP_181932.1| DNA mismatch repair protein MutS [Dehalococcoides ethenogenes 195]
gi|115299206|sp|Q3Z767.1|MUTS_DEHE1 RecName: Full=DNA mismatch repair protein MutS
gi|57224454|gb|AAW39511.1| DNA mismatch repair protein MutS [Dehalococcoides ethenogenes 195]
Length = 858
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 310/628 (49%), Gaps = 68/628 (10%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G LL LE E +L+Q ++ + +++ ++++D+ L+IF++
Sbjct: 227 VSAAGALLNYLE-ETQKSSLKQ---------LERLAAYTISDYMQIDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L E++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGVLDQTKTAMGGRLLRKFLGQPLLRQEDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
ASL + L + D+ I + + + + + S+ ++ +++ F
Sbjct: 329 SLARASLAKALGQIADMERIANRIRQKTIL--PKELISLKNSLETVSAIHRQF------G 380
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L RL F K L + ++V I+ + G G ++R GF E+D+L
Sbjct: 381 LMPPPRLAYFLNGLKP-------LPEMLDIVNEAINDDPPSTLGEGKVIRSGFNPEMDKL 433
Query: 370 RQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
+ + FL ++ + E Q K + + Y GY + + L D Q
Sbjct: 434 CSLAGDARTFLSQMEAREREQTG--IKSL---KLGYNRVFGYYIEVSNANLADIP----Q 484
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLL 489
+ + ++ E + TP+ +E +NL+ + ++L+ME + +++ + F LL
Sbjct: 485 NYIRKQTLVNAER----FITPELKEYENLILNAKERLLEMETGLYEQVLNQLGGFYSALL 540
Query: 490 KAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTR 547
A LD + A VA +N Y+RP+ E L I GRH V Q + +F ND
Sbjct: 541 SNAAALASLDVLSAFAEVAVRNGYVRPLFHSENSLVIHRGRHPMVEQGLGYGSFAANDIS 600
Query: 548 ID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+ D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LTD +
Sbjct: 601 LSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLTDRIFSRIGARE 660
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDV 657
++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ + + Y + +
Sbjct: 661 DLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQAVVEYIHSQPSL 720
Query: 658 PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
K L TH EL+ LP R+K Y ++V S D ++VFL+R+VPG S
Sbjct: 721 HAKTLFATHYHELVELANYLP---RVKNYNIAV------SEDRGEVVFLHRIVPGGVDKS 771
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQN 744
YG+H A LAG+P VIKRA VL +N
Sbjct: 772 YGIHVAKLAGLPGWVIKRAYEVLTELEN 799
>gi|335438997|ref|ZP_08561722.1| DNA mismatch repair protein MutS [Halorhabdus tiamatea SARL4B]
gi|334889304|gb|EGM27592.1| DNA mismatch repair protein MutS [Halorhabdus tiamatea SARL4B]
Length = 865
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 190/703 (27%), Positives = 319/703 (45%), Gaps = 98/703 (13%)
Query: 79 TVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLA 138
TV V++ F +E A R ++E + ++ S+ +VRA G LL+
Sbjct: 200 TVSPVEAGYFEHEAASQR--------------VREYFGAPDRLL--ASDAEVRACGALLS 243
Query: 139 VLENERIVDTLEQKESGNASITIDSVIEVSL---NKFLKLDATAHEALQIFQTDKHPSHM 195
E R G +D + +S ++ LDA A E+L+IF+
Sbjct: 244 YAEYAR----------GGQDGRLDYLNYLSRYDPRAYMVLDAVALESLEIFE-----RRS 288
Query: 196 GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS 255
G A ++ ++++ + +GRR L +W RP++D + + +R A+ +
Sbjct: 289 VTGGAD--LTLVDIVDETASALGRRRLTDWLRRPLIDRDRIEARHGAVEELVSDVRTRER 346
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV-NKIFEVGIS--ESLRE 312
L E L V D+ ++ + + A D + ++ L + +K+ E L E
Sbjct: 347 LQELLAAVYDLERLISRVSRSRA--DARDLRSLKDTLDVLPEIRSKLAEADAPLLADLHE 404
Query: 313 QLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
QL E+A V +L+ I + E G ++ EG+ D LDELR
Sbjct: 405 QL----------------DEMADVRDLIEDAIAADPPTEITEGGIISEGYHDRLDELRAT 448
Query: 373 YEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT--LEQLQG 430
E + +A LE + + +H GY + + + LD ++ Q
Sbjct: 449 EREGKAW---IADLEESERERTGIDSLKVGHNAVH--GYYIEVTDANLDRVPEDYQRRQT 503
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
+ A Y+TP+ +E ++ + + D+E + D+ + S+ +
Sbjct: 504 LKNAER----------YYTPELKEREDEIFRAAGRADDLEYELFADVRDQVAAESERVQA 553
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN 550
+ A LD + A VA + +Y RP + + + I+ GRH + E T D F+PNDTR+D+
Sbjct: 554 VADAVATLDVLVGFATVAAEYDYCRPSVDGDGI-HIEGGRHPVVERTEDRFVPNDTRLDD 612
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
D + +ITGPN SGKS +++QVALI L+ GSFVPA++A + + D S +
Sbjct: 613 DAFLAVITGPNMSGKSTHMRQVALIAILAQAGSFVPAESAVLRIVDRVFTRVGASDDIAG 672
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++ ++ +L QAT+ SL LLDE G+GT T DG+ + + FV +V L
Sbjct: 673 GRSTFMVEMSELATILDQATADSLVLLDEVGRGTSTTDGLA-IAQAVTEFVHDEVGATTL 731
Query: 663 VCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
TH LTE++ + L + L F R E DV F Y + PG A SYG+
Sbjct: 732 FATHHHELTEVVAD--LDGALNLHF------RTEREDGDVS---FPYDIAPGAAAASYGV 780
Query: 720 HCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQ 762
A +AGVP V+ R+ +L + ++ + + E A D
Sbjct: 781 EVAGVAGVPDPVVDRSRELLADSDHDDELGQLGDERHRAVDDH 823
>gi|150390307|ref|YP_001320356.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
gi|172052479|sp|A6TR79.1|MUTS_ALKMQ RecName: Full=DNA mismatch repair protein MutS
gi|149950169|gb|ABR48697.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
Length = 880
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 178/615 (28%), Positives = 301/615 (48%), Gaps = 65/615 (10%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S+++ + LD + L++ +T + S G S+ G+++K T MG R+LR W
Sbjct: 266 SIHEKMTLDINTRKNLELTETIRSKSKKG--------SLLGVLDKTSTAMGGRMLRKWIE 317
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
P++D +N RL A+ EL L E+LK + D+ + K + S T D A
Sbjct: 318 APLIDPVIINKRLEAVQLLKEQIELRQELKESLKKIYDLERLAGKISYGSV--TPRDLIA 375
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
S+ L + E E+ + ++ + D +++ S + EL+ + + + D
Sbjct: 376 LKNSLSYLPSIINGLEKIQGETFQSLVQ--SIDPLDEVHSLV--ELSILEDAPLSSKD-- 429
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G +++EG+ E+DEL+ E ++ +A LE Q + + I Y
Sbjct: 430 -------GGIIQEGYHKEVDELKNASTEGRQW---IAQLE--QKERVNSGIKSLKIKYNK 477
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + I + L E ++ A + Y TP+ +E+++ + K++
Sbjct: 478 IFGYYIEITKSNLSMVPTEYIRKQTLANCER--------YVTPELKEIESKILGAEEKVI 529
Query: 468 DMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+E + R+ ++H +A+ AELD S A +A +NN+++P + +
Sbjct: 530 LLEYHLFIEVREKIAHEITRIQQTARAI---AELDVLYSFAEIAAENNFIKPHINTSNEI 586
Query: 525 DIQNGRHVLQEMTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
I GRH + E+T + +F+PNDT +DN D ++IITGPN +GKS Y++QVALIV ++ I
Sbjct: 587 KIVEGRHPVVELTFNKESFVPNDTYMDNRDCSMSIITGPNMAGKSTYMRQVALIVLMAQI 646
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA A++G+ D S + S+FM+++ ++ +L AT+ SL +LDE G
Sbjct: 647 GSFVPASEASIGIVDRIFTRIGASDDLAQGHSTFMVEMSEMANILNNATANSLVILDEIG 706
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
+GT T DG+ + I Y K L TH EL EG K + +K Y + V
Sbjct: 707 RGTSTFDGLSIAWAVIEYMQQYK-KSKTLFSTHYHELTELEG---KIQGVKNYNILV--- 759
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-EAAQNNKHVERW 751
D E+IVFL ++V G SYG+ A LAG+P + RA +L + + N ++
Sbjct: 760 ---EEDGEEIVFLRKVVSGSTSKSYGIQVAKLAGLPLNTLIRAQEILSDLEKKNNEIKIP 816
Query: 752 SHENISAQDQQYKNA 766
+ E I+ + N+
Sbjct: 817 AEEEIALSRESEGNS 831
>gi|160947536|ref|ZP_02094703.1| hypothetical protein PEPMIC_01470 [Parvimonas micra ATCC 33270]
gi|158446670|gb|EDP23665.1| DNA mismatch repair protein MutS [Parvimonas micra ATCC 33270]
Length = 861
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 171/601 (28%), Positives = 295/601 (49%), Gaps = 73/601 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L+ +L++DA + L++ + + G S+ ++N TPMG RLL W +
Sbjct: 261 LSDYLRIDANSRINLELKKNNFSNDING--------SLLSVINHTKTPMGFRLLNKWLDQ 312
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++++E + R + + + + L L E L + DI I K + + A D
Sbjct: 313 PLIEIEKIQRRQSLVEDLVLNSNLRNKLEELLASISDIERINSKISFGNC--NARDLIHL 370
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
S+ ++ + K+F L+ + + + + Y+Y L+ I +
Sbjct: 371 KNSLSAVPKIKKLF--------------LDSNTLFSNIALNIPDTEYIYNLIDSAILEDV 416
Query: 349 SKEKGYGTLVREGFCDELDELRQIY----EELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
G L++ G+ +ELD +R E+L ++ EV + + +L ++
Sbjct: 417 GILLKEGNLIKIGYDEELDVIRNNKIVGKEKLIKY--EVDQRNITGIKNLR-------LI 467
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
+ + GY + + + + L F R Y T + ++N++
Sbjct: 468 FNKKTGYFFEVTK------SYQNLVPEYFELKQTLTNANR--YKTNELLTIENMIFGSEI 519
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
I++ E + + + I + L K + + +D SL++VA +NNY +P L E ++
Sbjct: 520 DIIEKEYELFISIRNTIKMNIKILQKLSDIISFIDSIFSLSIVAFKNNYCKPTLNSEGII 579
Query: 525 DIQNGRHVLQEM---TVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
DI+NGRH + E +++ FIPNDT I +D I IITGPN SGKS YI+Q+ALIV L+
Sbjct: 580 DIKNGRHPVIESFLSSINEFIPNDTNIGQSDNLIQIITGPNMSGKSTYIRQIALIVILAQ 639
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPAD+A + + D S ++ +S+FM+++ +V +LR AT SL +LDE
Sbjct: 640 IGSFVPADSANISIVDKIFTRIGASDNLYKGESTFMVEMKEVNNILRYATKNSLLILDEV 699
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNE----GCLPKSERLKFYTMS 688
G+GT T DG+ L + Y +T ++ K L TH EL++ C+ +
Sbjct: 700 GRGTSTFDGLSLAWAILEY-ITKNIKSKTLFATHYHELIDLEHTFACIKNKH------IQ 752
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
V+ + N ++IVFL +++ G A SYG+ A LAG+P EVI R+ +L++ + NK +
Sbjct: 753 VIEDKEN----DEIVFLRKIMDGGANKSYGIAVAKLAGLPMEVINRSKIILDSIE-NKEI 807
Query: 749 E 749
E
Sbjct: 808 E 808
>gi|154483535|ref|ZP_02025983.1| hypothetical protein EUBVEN_01239 [Eubacterium ventriosum ATCC
27560]
gi|149735445|gb|EDM51331.1| DNA mismatch repair protein MutS [Eubacterium ventriosum ATCC
27560]
Length = 897
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 296/604 (49%), Gaps = 78/604 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
+I S + F+ LD + L++ +T + G S+ +++K T MG R LR
Sbjct: 272 LIPYSTSTFMILDTSTRRNLELCETLREKQKKG--------SLLWVLDKTKTAMGARTLR 323
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
N+ +P++ E + +R I S L E L + D+ +L K + S
Sbjct: 324 NYIEQPLISKEEIINRQKVIEELNKSMITRDELREYLAPIYDLERLLSKISYRS--ANPR 381
Query: 284 DWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D AF S+ L H+ I F+ + + + +L D++E + I+ E +
Sbjct: 382 DLIAFKTSLSMLPHIKNIIMDFKSPLFKDIYNRL-----DVLEDITTLIS-------ESI 429
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV--ASLELVQLPHLCKEM 398
+ +N + G ++R G+ +E+D LR E +L E+ + E + +L
Sbjct: 430 MDDPPINIKE----GGIIRTGYNEEIDRLRNAKTEGKTWLAEMEASEKESTGIKNLK--- 482
Query: 399 FVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
I Y GY + + F++++ D + + T Y T K +EL
Sbjct: 483 ----IKYNKVFGYYIEVSNSFKDQVPDYYVRK-----------QTLTNAERYTTDKLKEL 527
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++++ K+ +E I + I + + + A++D F SLA VA +N+Y++
Sbjct: 528 EDVIMGAEDKLFSLEYNIFTAIRDEIFNQINRIQQTAKAVAQIDVFASLAFVADRNHYVK 587
Query: 516 PILTLEPLLDIQNGRH-VLQEMTVD-TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQV 572
P + + ++DI++GRH V+++M D TFI N+T +D N+ R+ IITGPN +GKS Y++Q
Sbjct: 588 PKINEKGVIDIKDGRHPVVEKMMPDNTFIANNTFLDMNNNRLAIITGPNMAGKSTYMRQT 647
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ IGSFVPA A + + D S + + QS+FM+++ +V +LR AT+
Sbjct: 648 ALIVLMAQIGSFVPAKYANISICDKIFTRVGASDDLASGQSTFMVEMTEVANILRNATAN 707
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD---VPPKVLVCTHLTELLN-EGCLPKSE 680
SL +LDE G+GT T DG+ + + + CD + K L TH EL EG LP
Sbjct: 708 SLLILDEIGRGTSTFDGLSIAWAVVEHI--CDKKLLGAKTLFATHYHELTELEGTLPG-- 763
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ Y +SV +DIVFL ++V G A SYG+ A LAGVP V+ RA ++
Sbjct: 764 -VNNYCISV------KEQGDDIVFLRKIVAGGADKSYGIQVAKLAGVPESVLNRAKELVN 816
Query: 741 AAQN 744
N
Sbjct: 817 ELSN 820
>gi|288800639|ref|ZP_06406096.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 299
str. F0039]
gi|288332100|gb|EFC70581.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 299
str. F0039]
Length = 873
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 174/626 (27%), Positives = 302/626 (48%), Gaps = 74/626 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++++LD +L++ + H G G S+ +++ +TPMG R
Sbjct: 255 ITSISRIEEDRYVRLDKFTIRSLELINS----MHEG------GSSLLNVIDSTITPMGSR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L+ W + P+ + + + RLN + SE+ L + L + D+ I+ + SP
Sbjct: 305 MLKRWLVFPLKEQKAIEQRLNVVEHIYNSEDFEQVLSDQLHRIGDLERIISRVAVGRVSP 364
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A D +K+ C + +G +L E +R + A IT++
Sbjct: 365 REVVQLRYALDAIEPIKAACVASKNESLVRMGEQITLCESIR-------ARIAKEITSDP 417
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ VN+ G ++ +G ELDELR I ++L + E+ Q
Sbjct: 418 PQL---------VNK------GGVIADGVNPELDELRAISHSGKDYLLHIQEREVEQTG- 461
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y + GY + + D E ++ A ++ Y T + +
Sbjct: 462 ----ISSLKIGYNNVFGYYLEVRNMHKDKVPQEWVRKQTLAQAER--------YITQELK 509
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E I DL++ + F + N A +DC S A VA N+Y
Sbjct: 510 EYEEKILGAEDKILALEAQIFNDLIAALQEFIPQIQINANIIARIDCLHSFASVAQSNHY 569
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP + +LDI+ GRH + EM + + ++PND +D++ + I +ITGPN +GKS +
Sbjct: 570 VRPEINNTEVLDIKAGRHPVIEMQLPIGERYVPNDILLDSEKQQIMMITGPNMAGKSALL 629
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +GSFVPA +A++G+ D S +++ +S+FM+++ + +L
Sbjct: 630 RQTALIVLLAQVGSFVPAHSASIGVVDKIFTRVGASDNISVGESTFMVEMTEAANILNNV 689
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSE 680
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + E
Sbjct: 690 SSRSLILFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFATHYHE-LNE-MEKRFE 747
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R+K + +SV E N ++F+ +LV G + S+G+H A +AG+P ++KRA +L+
Sbjct: 748 RIKNFNVSV--KEANGK----VMFMRKLVEGGSEHSFGIHVADIAGMPKSIVKRANVILK 801
Query: 741 A-AQNNKHVERWSHENISAQDQQYKN 765
+NN V S I+ D+ +N
Sbjct: 802 QLEKNNDQVGEVSKNAINKLDEPNEN 827
>gi|317478037|ref|ZP_07937219.1| DNA mismatch repair protein MutS [Bacteroides sp. 4_1_36]
gi|316905826|gb|EFV27598.1| DNA mismatch repair protein MutS [Bacteroides sp. 4_1_36]
Length = 871
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 297/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 VTSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K+ C SL H+ + ++ I +S+R++
Sbjct: 363 REVVALKVALQAIEPIKAACMDADNASLNHIGE--QLNICQSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELRQI ++L ++ E
Sbjct: 407 -IDREIDNDPPLLIN-----------KGGVIKSGVSAELDELRQIAYSGKDYLLQIQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L ++P L I Y + GY + + D E ++ A ++
Sbjct: 455 SELTEIPSLK-------IGYNNVFGYYIEVRNTHKDKVPAEWIRKQTLANAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYAELVQSLSEFIPAIQINANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPN 561
A +NNY+RP++ + +L+I GRH + E + + +I ND +D+ + I IITGPN
Sbjct: 560 TAARENNYIRPVIADDDVLEICQGRHPVIEKQLPIGEKYIANDVMLDSQTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L + +SL L DE G+GT T DGI + + + + L TH E LN
Sbjct: 680 AADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 790
Query: 732 IKRAAYVLE 740
+KRA +L+
Sbjct: 791 VKRANDILK 799
>gi|53715862|ref|YP_101854.1| DNA mismatch repair protein MutS [Bacteroides fragilis YCH46]
gi|81690525|sp|Q64MG7.1|MUTS_BACFR RecName: Full=DNA mismatch repair protein MutS
gi|52218727|dbj|BAD51320.1| DNA mismatch repair protein mutS [Bacteroides fragilis YCH46]
Length = 862
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 181/637 (28%), Positives = 305/637 (47%), Gaps = 89/637 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D E + G+ I S+ + +K+++LD +L++ +
Sbjct: 225 ASGAILQYL------DMTEHTQVGH----ITSLARIEEDKYVRLDKFTVRSLELIGS--- 271
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG RLL+ W + P+ D + +N RLN + +F +
Sbjct: 272 ---MNDG----GSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPD 324
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
+ + L + D+ I+ K SP + A +K C + +
Sbjct: 325 FRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRI 384
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L I ++ I + + +N+ G ++++G
Sbjct: 385 G------EQLNLC-ISIRDRIEKEINNDPPLL---------INK------GGVIKDGVDT 422
Query: 365 ELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI ++L ++ E L +P L I Y GY + + D
Sbjct: 423 ELDELRQIAYSGKDYLLKIQQRESELTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 475
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 476 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 527
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC LS A VA +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 528 EFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGE 587
Query: 540 TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +DN ++ IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 588 KYIANDVLLDNATQQVIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKI 647
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 648 FTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVE 707
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 708 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKL 758
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
G + S+G+H A +AG+P ++KRA +L+ +++
Sbjct: 759 ERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESD 795
>gi|265764729|ref|ZP_06093004.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_16]
gi|336407540|ref|ZP_08588037.1| DNA mismatch repair protein mutS [Bacteroides sp. 2_1_56FAA]
gi|383116359|ref|ZP_09937109.1| DNA mismatch repair protein mutS [Bacteroides sp. 3_2_5]
gi|423248028|ref|ZP_17229044.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL03T00C08]
gi|423252979|ref|ZP_17233910.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL03T12C07]
gi|423259659|ref|ZP_17240582.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL07T00C01]
gi|423263366|ref|ZP_17242369.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL07T12C05]
gi|423270088|ref|ZP_17249060.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL05T00C42]
gi|423272456|ref|ZP_17251403.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL05T12C13]
gi|423282672|ref|ZP_17261557.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 615]
gi|251948383|gb|EES88665.1| DNA mismatch repair protein mutS [Bacteroides sp. 3_2_5]
gi|263254113|gb|EEZ25547.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_16]
gi|335947444|gb|EGN09235.1| DNA mismatch repair protein mutS [Bacteroides sp. 2_1_56FAA]
gi|387775969|gb|EIK38072.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL07T00C01]
gi|392657506|gb|EIY51139.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL03T12C07]
gi|392660902|gb|EIY54500.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL03T00C08]
gi|392699633|gb|EIY92807.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL05T00C42]
gi|392707661|gb|EIZ00777.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL07T12C05]
gi|392708886|gb|EIZ01988.1| DNA mismatch repair protein mutS [Bacteroides fragilis CL05T12C13]
gi|404582240|gb|EKA86935.1| DNA mismatch repair protein mutS [Bacteroides fragilis HMW 615]
Length = 871
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 181/637 (28%), Positives = 305/637 (47%), Gaps = 89/637 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D E + G+ I S+ + +K+++LD +L++ +
Sbjct: 234 ASGAILQYL------DMTEHTQVGH----ITSLARIEEDKYVRLDKFTVRSLELIGS--- 280
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG RLL+ W + P+ D + +N RLN + +F +
Sbjct: 281 ---MNDG----GSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPD 333
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
+ + L + D+ I+ K SP + A +K C + +
Sbjct: 334 FRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRI 393
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L I ++ I + + +N+ G ++++G
Sbjct: 394 G------EQLNLC-ISIRDRIEKEINNDPPLL---------INK------GGVIKDGVDT 431
Query: 365 ELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI ++L ++ E L +P L I Y GY + + D
Sbjct: 432 ELDELRQIAYSGKDYLLKIQQRESELTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 484
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 485 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 536
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC LS A VA +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 537 EFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGE 596
Query: 540 TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +DN ++ IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 597 KYIANDVLLDNATQQVIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKI 656
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 657 FTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVE 716
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 717 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKL 767
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
G + S+G+H A +AG+P ++KRA +L+ +++
Sbjct: 768 ERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESD 804
>gi|336434947|ref|ZP_08614666.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002355|gb|EGN32466.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
Length = 888
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 297/611 (48%), Gaps = 68/611 (11%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R+LR +
Sbjct: 265 TTGKYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARMLRKFIE 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P+++ + + RL+A+ S + E L V D+ ++ + + D TA
Sbjct: 317 QPLIEKQEILRRLDAVEELKQSAISREEIREYLSPVYDLERLITRITYGTA--NPRDLTA 374
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
F S+ L + + E S L++ L D +E + + +A L +
Sbjct: 375 FAGSLSMLPPIRYLLEEMESSLLKDIYAEL--DPLEDLCTLVQNAIADEPPLAM------ 426
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
KE G ++R+G+ +E+D LR+ E ++L A LE + + I Y
Sbjct: 427 --KE---GGIIRDGYNEEVDTLRRAKSEGKDWL---AKLEQDEREKTGIKTLR--IKYNK 476
Query: 408 QIGYLMCI---FEEKLDD--TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
GY + + ++E + D T + L E Y TP+ +EL++ +
Sbjct: 477 VFGYYLEVTNSYKELVPDYYTRKQTLANAER-------------YITPELKELEDTILGA 523
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
K+ +E + + I + A LD F SLALVA +NNY+RP +
Sbjct: 524 EDKLYALEYELYCTIRDTIAAEVKRIQTTAKAIASLDVFSSLALVAERNNYVRPKINESG 583
Query: 523 LLDIQNGRH-VLQEMTVD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLS 579
+DI++GRH V+++M + TFI NDT +D+ R++IITGPN +GKS Y++Q ALIV ++
Sbjct: 584 KIDIKDGRHPVVEQMIPNGTFICNDTLLDDKKQRVSIITGPNMAGKSTYMRQAALIVLMA 643
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +GL D S + + QS+FM+++ +V +LR ATS+SL +LDE
Sbjct: 644 QIGSFVPAAKADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDE 703
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DG+ + + Y + K L TH EL EG K + + Y ++V
Sbjct: 704 IGRGTSTFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEG---KIDNVNNYCIAV 760
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+DIVFL ++V G A SYG+ A LAGVP VI RA ++E N
Sbjct: 761 ------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDLVIDRAKEIVEELVNEDITI 814
Query: 750 RWSHENISAQD 760
R S + +D
Sbjct: 815 RVSEIAVGGKD 825
>gi|449017890|dbj|BAM81292.1| mutS family DNA mismatch repair protein MSH5 [Cyanidioschyzon
merolae strain 10D]
Length = 902
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 271/551 (49%), Gaps = 49/551 (8%)
Query: 218 GRRLLRNWFLRPILDLENLNSRL---NAISFFLCSEELMASLHETLKYVKDIPHILKKFN 274
G+R +R +PI D + RL A++ L S +++ + LK V ++ ++
Sbjct: 272 GQRKIREILTQPICDPARIRERLEVVQALAGALASIDMIL-FRKLLKAVHHPQNLWRRLV 330
Query: 275 SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESL-------REQLRLLNFDIVEKAAS 327
S + TA DW A C++ V +F G S+ + RE+ L + E
Sbjct: 331 SGA--ATAEDWAALHG--CNVA-VAGLFN-GFSDLVQIVLPVWRERSAFLQENAQELTPV 384
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
V + ID++ SK G+ V+ GF + LD +R E L FLE VA E
Sbjct: 385 LDPEWYTSVATRIGACIDMSGSK-SGWNPAVKTGFDENLDNMRLALESLDSFLESVAQSE 443
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
+ C+ + ++GY+M I + D +E E A D D + +
Sbjct: 444 KSRYFGSSATERSICVQFHPRLGYVMKI--SRSDAAQMESDASLEHAL-DTDTDA---YV 497
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
+TR+LD LGD+ I D+E++I RDL + + L + + AE+DC+LS AL
Sbjct: 498 KNDRTRQLDEELGDLPGAINDLEKSIIRDLEAAVIPTIPVLSRTCDLLAEIDCWLSFALS 557
Query: 508 AHQNNYMRP-ILTLEPL--LDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSG 564
A + + P +L E +D+ + RH +QE+TVD+F+PN + G + ++TGPN SG
Sbjct: 558 AMRYEWTCPQVLGAESACHIDVIDARHPIQELTVDSFVPNSLSVRR-GDVCVVTGPNASG 616
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGM 616
KS+ ++QVALIV ++ +GS+VPA +A +G+TD E S+FM D Q+
Sbjct: 617 KSVLLRQVALIVHMAQVGSYVPARSARIGVTDRIFARVKSFDSTGRETSTFMNDCIQMAQ 676
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPK--VLVCTHLTELLNE- 673
LR ATS+SL ++DEFGKGT EDG L ++ T +V + VL TH E+
Sbjct: 677 TLRYATSRSLAIVDEFGKGTSDEDGRALAAAVLSELAT-NVTGQMTVLFATHFHEVTGTL 735
Query: 674 -GCLPKSERLKFYTMSVLRPENNST-DVED------IVFLYRLVPGHALL-SYGLHCALL 724
+ RL+F+ + VL EN T D D + LY+L G L SY L CA
Sbjct: 736 YAQAHANSRLRFFKLEVLVQENRQTGDAPDQNDDVVLTALYKLSEGAPCLDSYALACARA 795
Query: 725 AGVPAEVIKRA 735
G+P ++ RA
Sbjct: 796 NGMPDAILSRA 806
>gi|403214991|emb|CCK69491.1| hypothetical protein KNAG_0C03870 [Kazachstania naganishii CBS
8797]
Length = 862
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 173/605 (28%), Positives = 280/605 (46%), Gaps = 64/605 (10%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
+D +LQIF + + + KEG FS+F ++N + ++LL +W P+ D+
Sbjct: 211 IDEDTIASLQIFPSSHNFYSEKVN--KEGCFSIFQLLNHTSSNHSKKLLTSWLTAPLTDI 268
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKY-VKDIPHILKKFN----SPSFIYTASDWTAF 288
+ +R I L +E S + ++Y +K P + FN T + F
Sbjct: 269 NKIKARQAVIEILL--DEANGSQFQEIQYLIKKCPDMFSVFNQFCDGKETYRTWLNLELF 326
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ CSL +V ++ +++ L + L + + V I+D+
Sbjct: 327 LEICCSLFRTVHALDVTDYNNILSRIKALKY----------VKTLHSLSQHVSSIMDIEN 376
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS------LELVQLPHL-----CKE 397
+K+ T+ G +LD+ R IY EL L EVA+ ++V L L KE
Sbjct: 377 TKDTKQATIAY-GVDKKLDKYRTIYNELEGILVEVANNSEDTLTDVVPLGKLNEVRRLKE 435
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE-FAFSDMDGETKRLFYHTPKTRELD 456
+ VYI ++GYL+ LD E F+ + ++ + +++ T +T +LD
Sbjct: 436 NDIVNAVYIPELGYLVA-----LDILVEEHFVTFQDIMWEEVFRTSTHIYFKTEETSKLD 490
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
GDI KI D+ I L I ++ AELD S A V+ N+Y +P
Sbjct: 491 EAYGDICSKISDLRIEILYSLKVEILNVKTSAIEFYELIAELDVLQSFAQVSQTNDYTKP 550
Query: 517 ILTL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYS 563
+ L E + ++ RH L E TV +IPND +D + R+NI++G N S
Sbjct: 551 KMVLDESFISVKKARHPLYETTVSIYIPNDLTLDGGKYSDEHWFEHDKNRVNILSGANAS 610
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVG 615
GK+++I Q+AL+ +L+ IG +VPAD AT+G+ D + +T QSSF +D Q+
Sbjct: 611 GKTVFITQIALLCYLAQIGCYVPADNATIGIVDKILTRIRTEETVTKLQSSFELDSRQMS 670
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
L AT +SL L+DE+GKGT DG L G I + T P+VL TH EL
Sbjct: 671 KCLAFATPRSLVLIDEYGKGTDVIDGPALFGAIIKHLSTDKACPRVLATTHFHELFKPDL 730
Query: 676 LPKS-ERLKFYTMSVL----RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
L ++ Y +L P + + + FLY + G S+G++CA + G+
Sbjct: 731 LTTHIPGVQHYVTEILWDNTTPGSETEPNFGLTFLYTIKKGICDNSFGVYCAKICGLKKS 790
Query: 731 VIKRA 735
+++R
Sbjct: 791 IVERG 795
>gi|294102017|ref|YP_003553875.1| DNA mismatch repair protein MutS [Aminobacterium colombiense DSM
12261]
gi|293616997|gb|ADE57151.1| DNA mismatch repair protein MutS [Aminobacterium colombiense DSM
12261]
Length = 858
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 177/603 (29%), Positives = 281/603 (46%), Gaps = 90/603 (14%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
FL LD + + L++ D G +++ ++NKC PMGRRLLR W LRP+L
Sbjct: 261 FLHLDVASQQNLELVSGD-------------GPTLYSVLNKCKNPMGRRLLREWILRPLL 307
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTA 287
D + +N R N + F + + L L +DI + + +P + D
Sbjct: 308 DQDAINKRQNGVEFLVQDPVVRQKLQNLLGECRDIERASSRLSLGTGNPRDLAAIRDTLL 367
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+ + + + + S++ E L L AS + E+
Sbjct: 368 LIPLVYGYCKSSPLEKFISSDNSLETLSTL-------LASALCDEV-------------- 406
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEE----LPEFLE-EVASLELVQLPHLCKEMFVPC 402
+ G ++R GF ELD R++ E L ++LE E A ++ +L ++F
Sbjct: 407 -PRHLHNGDVIRTGFNSELDSWRELREHGDQWLDQYLEKEKAKTDIPKLKVGSNKIF--- 462
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
GY + I + LD ++ ++ + TP+ +E + +
Sbjct: 463 -------GYYLEISKGNLDKVPENYIRKQTLVSAER--------FITPELKEFEEKMAAS 507
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC---FLSLALVAHQNNYMRPILT 519
+I +E I DLV H +H+ K + AA L C SLA VA + NY+RP +
Sbjct: 508 EQEIASLESKIYADLVQHTL---EHVQKIQDGAAMLSCIDVLASLAQVAWERNYIRPQIN 564
Query: 520 LEPLLDIQNGRHVLQEMT-VD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIV 576
L I+ GRH + E T +D F+PND +D D RI +ITGPN +GKS Y++ AL+V
Sbjct: 565 NGLNLKIEGGRHPVIEATFLDLPFVPNDIVLDGDEERIALITGPNMAGKSTYLRMAALLV 624
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G+F+PA A++GL D ++ S+FM+++ + +L T +S+ +
Sbjct: 625 IMAQMGAFIPAAEASMGLMDRVFTRIGARDELSRGNSTFMVEMIETANILHNVTDRSIVV 684
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYT 686
LDE G+GT T DG+ + + Y C PKVL TH EL+ E L LK +
Sbjct: 685 LDEIGRGTSTYDGMSIAWAVLEYLDHGCGSKPKVLFATHYHELVALEDHL---NGLKNLS 741
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
M+V E I FLY++V G A SYG+ A LAG+P V+KRA ++LE +
Sbjct: 742 MAVHEGERG------ISFLYKVVDGPADRSYGIEVARLAGIPPAVLKRAFHLLETFERAD 795
Query: 747 HVE 749
V+
Sbjct: 796 EVK 798
>gi|258515354|ref|YP_003191576.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
gi|257779059|gb|ACV62953.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
Length = 897
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 186/671 (27%), Positives = 332/671 (49%), Gaps = 91/671 (13%)
Query: 88 FSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVD 147
F++ QA+ L+ +I E N +++M + V A+GGLL L
Sbjct: 204 FTFTQAYKSLVD----------NIGEEKLTENKLLEMTAAVC--AAGGLLTYL------- 244
Query: 148 TLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
KE+ ++ ++++ ++F+ LDAT + L++ ++ + + G S+
Sbjct: 245 ----KETQKTALQHLNAITVYKPSRFMVLDATTRKNLELTKSLREGTKWG--------SL 292
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDI 266
++++ VT MG RLL+NW +P+L +N RL+A++ + + L E L + D+
Sbjct: 293 LWVLDRTVTAMGGRLLKNWLEQPLLSAAKINLRLDAVAELIKDGFIRYDLKEILSKLYDL 352
Query: 267 PHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGIS---ESLREQLRLLN--FDI 321
+ + + A D A S+ L + +I S L EQ+ +L+ +D+
Sbjct: 353 ERLTGRIAYGT--AGARDLNAIKVSLAVLPQIKEILARTSSVLLSKLSEQIEILDELYDL 410
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
+E+A +ID N G +++ GF +++D LR ++ ++
Sbjct: 411 LERA-----------------VID-NPPVSVREGGMIKTGFNEKVDYLRSAGKDAKNWVA 452
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE 441
E+ + E + K + V + GY + + + + E ++ A ++
Sbjct: 453 EMEARERERTG--IKSLKVG---FNKVFGYYLEVTKSNIHLVPEEYIRKQTLANAER--- 504
Query: 442 TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCF 501
Y TP+ +E +N++ K+ ++E +I DL + + L K+ AA D
Sbjct: 505 -----YITPQLKEYENMILGARDKLNELEYSIFIDLRNIVADKIPALQKSARAAARADAL 559
Query: 502 LSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRI-DNDGRINIIT 558
++LA A + Y+RP + L+ I+ GRH + E + T F+PNDT I + D R+ ++T
Sbjct: 560 MALAETAVEERYLRPSINSNGLIKIKEGRHPVVERVLKTGEFVPNDTDINEQDRRLVLLT 619
Query: 559 GPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMID 610
GPN +GKS Y++QVALIV L+ +GSFVPAD A +G+ D + + QS+FM++
Sbjct: 620 GPNMAGKSTYMRQVALIVLLAQVGSFVPADYAEIGIVDRIFTRVGAADDLAGGQSTFMVE 679
Query: 611 LHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL 670
+++ +++ AT+QSL ++DE G+GT T DGI + I Y + D+ K L TH EL
Sbjct: 680 MNECKVIVENATAQSLIIMDEVGRGTSTYDGISIARALIEY-INRDLKAKTLFSTHYHEL 738
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
+ L + + +T++V + IVFL +++PG A SYG+H A LAG+P
Sbjct: 739 TD---LDQLHGVVNHTVAVQETGDG------IVFLRKVIPGKADRSYGIHVARLAGIPEN 789
Query: 731 VIKRAAYVLEA 741
++ RA VL +
Sbjct: 790 ILLRADEVLNS 800
>gi|29348530|ref|NP_812033.1| DNA mismatch repair protein MutS [Bacteroides thetaiotaomicron
VPI-5482]
gi|44888205|sp|Q8A334.1|MUTS_BACTN RecName: Full=DNA mismatch repair protein MutS
gi|29340435|gb|AAO78227.1| DNA mismatch repair protein mutS [Bacteroides thetaiotaomicron
VPI-5482]
Length = 862
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 244 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 293
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 294 LLKRWMVFPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 353
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 354 REVVQLKVALQAIEPIKQACLEADNASLNRIG------EQLNLC-ISIRDRIAKEINNDP 406
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--L 391
+ +N+ G ++++G +ELDELR+I ++L ++ E Q +
Sbjct: 407 PLL---------INK------GGVIKDGVNEELDELRRISYSGKDYLLQIQQRESEQTGI 451
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ +R K
Sbjct: 452 PSLK-------VAYNNVFGYYIEVRNIHKDKVPQEWIRKQTLV------NAERYITQELK 498
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
E + +LG KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 499 VYE-EKILG-AEDKILVLETQLYTDLVQALTEFIPQIQINANQIARLDCLLSFANVAREN 556
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 557 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSASQQIIIITGPNMAGKSA 616
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 617 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 676
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 677 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 733
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 734 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANT 787
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 788 ILKQLESD 795
>gi|60683780|ref|YP_213924.1| DNA mismatch repair protein MutS [Bacteroides fragilis NCTC 9343]
gi|375360684|ref|YP_005113456.1| putative DNA mismatch repair protein MutS [Bacteroides fragilis
638R]
gi|81313173|sp|Q5L7B7.1|MUTS_BACFN RecName: Full=DNA mismatch repair protein MutS
gi|60495214|emb|CAH10035.1| putative DNA mismatch repair protein MutS [Bacteroides fragilis
NCTC 9343]
gi|301165365|emb|CBW24937.1| putative DNA mismatch repair protein MutS [Bacteroides fragilis
638R]
Length = 879
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 181/637 (28%), Positives = 305/637 (47%), Gaps = 89/637 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D E + G+ I S+ + +K+++LD +L++ +
Sbjct: 242 ASGAILQYL------DMTEHTQVGH----ITSLARIEEDKYVRLDKFTVRSLELIGS--- 288
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG RLL+ W + P+ D + +N RLN + +F +
Sbjct: 289 ---MNDG----GSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPD 341
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
+ + L + D+ I+ K SP + A +K C + +
Sbjct: 342 FRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRI 401
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L I ++ I + + +N+ G ++++G
Sbjct: 402 G------EQLNLC-ISIRDRIEKEINNDPPLL---------INK------GGVIKDGVDT 439
Query: 365 ELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI ++L ++ E L +P L I Y GY + + D
Sbjct: 440 ELDELRQIAYSGKDYLLKIQQRESELTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 492
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 493 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 544
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC LS A VA +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 545 EFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGE 604
Query: 540 TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +DN ++ IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 605 KYIANDVLLDNATQQVIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKI 664
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 665 FTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVE 724
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 725 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKL 775
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
G + S+G+H A +AG+P ++KRA +L+ +++
Sbjct: 776 ERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESD 812
>gi|51892895|ref|YP_075586.1| DNA mismatch repair protein MutS [Symbiobacterium thermophilum IAM
14863]
gi|81692094|sp|Q67NK1.1|MUTS_SYMTH RecName: Full=DNA mismatch repair protein MutS
gi|51856584|dbj|BAD40742.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 875
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 287/581 (49%), Gaps = 61/581 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +M++ VT MG RLL++W RP+LDL +++R A+ + L A L L+ V
Sbjct: 296 TLLWVMDRTVTAMGARLLKSWLERPLLDLRQIHARHEAVGELVHRPVLRADLRALLQEVH 355
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISE---SLREQLRLLN--F 319
D+ + + S A D A +S+ +L + E +E LR+QL +L+
Sbjct: 356 DLERLAGRVAVGS--ANARDLVALKQSLVALPSIRVALEDVRAERLVELRDQLDMLDDVR 413
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
D++E A + E + + + G ++++GF E+DELR+I + +
Sbjct: 414 DLIEHAIAD---------EPPVALTE---------GGILKDGFHPEVDELRRIARDGKAW 455
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+ +V + E + K + I Y GY + + + L + ++ A +
Sbjct: 456 IAQVEARERERTG--IKSL---KIGYNKVFGYYLAVTKPNLPLVPPDYIRKQTLANEER- 509
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
+ TP+ +EL+ + +++D+E + ++ + + ++ AELD
Sbjct: 510 -------FITPELKELEEKVLHAAERVMDLEYELFVEIRQRVAAEVTRIQRSARAVAELD 562
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINI 556
S A VA Y RP++ +L+++ RH + E M F+PND +D + R+ +
Sbjct: 563 ALASFAEVASLYGYCRPLVDGSTVLELKGSRHPVLERVMEEGAFVPNDLLVDTGENRVLL 622
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN GKS ++Q AL V L+ GSFVPA++A +GL D S + +S+FM
Sbjct: 623 ITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVDRVFTRVGASDDLATGRSTFM 682
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++ +V +L AT +SL +LDE G+GT T DG+ + I + + + L TH
Sbjct: 683 VEMTEVANILHSATERSLVVLDEVGRGTATFDGLS-IAWAITEHIHQAIGCRTLFATHYH 741
Query: 669 ELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL EG LP +K Y+++V+ EDI+FL +LV G A SYG+ LAG+
Sbjct: 742 ELCELEGILPG---VKNYSVAVME------KGEDIIFLRKLVRGGADRSYGIQVGRLAGL 792
Query: 728 PAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVE 768
PA V++RA +L A + ER S +AQ + + AV+
Sbjct: 793 PASVVERAREIL-ATLEEQEGERKSRREAAAQRLRRQPAVQ 832
>gi|187918651|ref|YP_001884217.1| DNA mismatch repair protein MutS [Borrelia hermsii DAH]
gi|238689299|sp|B2S1E1.1|MUTS_BORHD RecName: Full=DNA mismatch repair protein MutS
gi|119861499|gb|AAX17294.1| DNA mismatch repair protein MutS [Borrelia hermsii DAH]
Length = 861
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 287/597 (48%), Gaps = 64/597 (10%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVT 215
N I ID++ S ++++ LD L++ + + + +S++ ++N C T
Sbjct: 245 NLLINIDTIYINSDSEYMFLDDVTQINLELVKNNNDLTAR--------YSLYSVLNDCKT 296
Query: 216 PMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNS 275
PMG+RLLR + L P+LD+ +N+RL+ + F + L L E L V DI I+ +
Sbjct: 297 PMGKRLLREYILNPLLDIAAINNRLDHVEFLNNNVNLSIKLREILSNVWDIERIISRLQM 356
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
Y D+ +++ + V ++ FD+ ++ ++
Sbjct: 357 RK--YAKKDFLFIRETLIAFFSVKRLLN-------EYSFNYWIFDVNDEG------DIRG 401
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
+Y L ID S E+ L+++G+ E+D LR++ +++++ E
Sbjct: 402 IYSL----IDCAISNEQD--ELIKQGYNSEIDRLRELKNNASKYVDDYLDFE-------- 447
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+ + I +I FE + + Q+ F S KR Y T K EL
Sbjct: 448 RNFSKINSLKIKRINVRGLFFE--VTKSYYGQVPS-HFIESQTLNSVKR--YKTNKLIEL 502
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
+ + D +L +E+ I ++ + +S + K F A +D + A +A +N Y+R
Sbjct: 503 ERDINDAEDNLLSLEQEIFDEIALKVVKYSTVIKKVAEFCAYIDVVSNFAYLAKKNEYVR 562
Query: 516 PILTLEPLLDIQNGRHVLQE---MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQV 572
P LT + ++ RH + E V+ F N RID + +ITGPN +GKS Y++Q
Sbjct: 563 PTLTNNKEIILECARHPVVEHYMKGVEAFTRNSVRIDGEKYFCLITGPNMAGKSTYLRQT 622
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
AL+V + HIGSFVPA+ A +G+TD S +++ +S+F++++++ +LR AT
Sbjct: 623 ALVVLMGHIGSFVPANKAIIGITDKIFCRIGASDNISKGESTFLVEMNETANILRNATQD 682
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
SL ++DE G+GT T DG+ + + Y + D+ + L TH EL +
Sbjct: 683 SLIIMDEVGRGTSTNDGLAIACSIVEYILE-DIKARSLFATHFHEL----SAINHDSFVN 737
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+M + R N +++FL + +L SYG++ A +AG+P +VIKRA +L++
Sbjct: 738 LSMKIERQGN------ELIFLREVEEKPSLNSYGIYVARIAGIPLKVIKRANIILKS 788
>gi|303232158|ref|ZP_07318861.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
gi|302513264|gb|EFL55303.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
Length = 873
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 276/554 (49%), Gaps = 61/554 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ ++++ +TPMG RLL+ W P+ D+ + R A++ + + L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQSYLDCIY 347
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D I+ + + S + D+T+ +S+ L H+ + + SL
Sbjct: 348 DFERIVGRIETGSV--SPRDFTSLRESLQVLPHIKNLLKEFSGLSL-------------- 391
Query: 325 AASCITTEL---AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
S I + A +Y+L+ I + G ++R+G+ +ELDELR + +L+
Sbjct: 392 --SSINNRIDNHADIYDLLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQ 449
Query: 382 --EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
E + E L K Y GY + + ++D F + ++
Sbjct: 450 KLEDKAREETGLKLKTK--------YNKVFGYFFEVSKSQIDKVPAY----FIRKQTTVN 497
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
E Y TP +E + + KI+ +E+ + +DL + I + + AELD
Sbjct: 498 AER----YITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKVQETARALAELD 553
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINI 556
SLA VA+++NY+ P + + ++I++GRH + E + + F+PND ++ +D +
Sbjct: 554 VLASLATVAYESNYICPNIVMNGQINIRDGRHPVIEKFLKREVFVPNDVVLNHDDEEFML 613
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN +GKS Y++QVA+++ ++ IGSF+PA AT+ D S ++ QS+FM
Sbjct: 614 ITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDISTGQSTFM 673
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++ +V +L ATS+SL +LDE G+GT T DG+ + + + + + K L TH
Sbjct: 674 VEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHAKTLFATHYH 732
Query: 669 ELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL+ E P RLK YT++V +DI FL R++ G A SYG+H A LAG+
Sbjct: 733 ELIPLEDVYP---RLKNYTVAV------KEKGKDIAFLRRIIRGGADRSYGIHVAKLAGL 783
Query: 728 PAEVIKRAAYVLEA 741
PA+V+KRA +LE+
Sbjct: 784 PAQVLKRAEVILES 797
>gi|219668762|ref|YP_002459197.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense
DCB-2]
gi|219539022|gb|ACL20761.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense
DCB-2]
Length = 850
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 278/572 (48%), Gaps = 59/572 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L E + RL+ + + L L
Sbjct: 267 GQGKKG-TLLSVLDFTKTAFGGRLLRRWIEQPLLLKEEIEKRLDYVEALVEDSFLRGDLI 325
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ V D+ ++ K + + A D + +++ L + + G S SL+ + L
Sbjct: 326 QLFNKVFDLERLMGKVSYGT--ANARDLLSLAQTLGVLPQLRALLAEGKSASLQAFIPAL 383
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D + +T E A E I + D G L++ G+ +E+DELR I
Sbjct: 384 EGLDPL-----AVTLEQAINPEAPISLKD---------GNLLKAGYSEEIDELRSISSGG 429
Query: 377 PEFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
++ ++ S+E + L ++F I H +L I E + TL + F
Sbjct: 430 KAWVAKLESMEKDRTGIRSLKVGYNKVFGYYIEVTHANSHL--IPAEYIRKQTLANAERF 487
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
TP+ +E + + K+ +E + +L + + +L+A
Sbjct: 488 ----------------ITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAARILEA 531
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID 549
+ AE+D + SLA A +++Y RP++ E L I GRH V++ M DT F+PNDT +
Sbjct: 532 AHALAEIDVYASLAEAAVRHHYSRPVMKGEGGLTIIEGRHPVVESMLQDTSFVPNDTILT 591
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + +ITGPN +GKS Y++QVALIV ++ IGSFVPA AT+ + D S +
Sbjct: 592 EDKHLALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLA 651
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+ QS+FM+++++V +LR T SL +LDE G+GT T DG+ + Y + PK
Sbjct: 652 SGQSTFMVEMYEVAHILRHVTPHSLIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKT 711
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH EL + + + + V E+ E+IVFL++++PG A SYG+
Sbjct: 712 LFATHYHELTD----LEETHAGIFNLHVGVREHG----EEIVFLHKIIPGRADRSYGIQV 763
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
A LAG+PA ++ RA +L +++ R H
Sbjct: 764 AKLAGLPANLLHRAKIILHELESSAKENRQEH 795
>gi|355704540|gb|AES02261.1| mutS-like protein 5 [Mustela putorius furo]
Length = 501
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 241/462 (52%), Gaps = 38/462 (8%)
Query: 310 LREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
LR+ R L + + + A + +L ++ L+ ++D S + T V ++D
Sbjct: 8 LRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPDID 66
Query: 368 ELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDTT 424
E ++ LP FL EVA EL L + +P ++YI IG+L+ I + + +
Sbjct: 67 EKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMAEAS 121
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+++G +F F ++L Y + +T+ELD LLGD++ I D E + L +
Sbjct: 122 DFEIEGLDFMFL----SEEKLHYRSARTKELDVLLGDLHCDIRDQETLLMYQLQCQVLAR 177
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-------LDIQNGRHVLQEMT 537
+ L + ++ A+ LD L+LA A Y RP + P + IQNGRH L E+
Sbjct: 178 ASVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPRPRYSPQLLGVRIQNGRHPLMELC 237
Query: 538 VDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
TF+PN D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D
Sbjct: 238 ARTFVPNSAECGGDRGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVD 297
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ + ++ S+FMIDL+QV + AT QSL L+DEFGKGT T DG+ LL
Sbjct: 298 AIFTRIHSCESISLGLSTFMIDLNQVAKAVNNATKQSLVLIDEFGKGTNTVDGLALLAAV 357
Query: 649 INYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
+ +++ V P + V T+ L+ LP+ L++ TM D +D+VF Y+
Sbjct: 358 LRHWLALGPVCPHIFVATNFLSLVQLQLLPQGPLLQYLTM------ETCEDGDDLVFFYQ 411
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ G A S+ H A AG+P +++ R V + ++ K ++
Sbjct: 412 VCEGIAKASHASHTAAQAGLPDQLLTRGKEVSDLIRSGKPIK 453
>gi|160887782|ref|ZP_02068785.1| hypothetical protein BACUNI_00185 [Bacteroides uniformis ATCC 8492]
gi|156862724|gb|EDO56155.1| DNA mismatch repair protein MutS [Bacteroides uniformis ATCC 8492]
Length = 871
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 172/609 (28%), Positives = 297/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 VTSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K+ C SL H+ + ++ I +S+R++
Sbjct: 363 REVVALKVALQAIEPIKAACMDADNASLNHIGE--QLNICQSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELR+I ++L ++ E
Sbjct: 407 -IDREIDNDPPLLIN-----------KGGVIKSGVSAELDELRRIAYSGKDYLLQIQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L ++P L I Y + GY + + D E ++ A ++
Sbjct: 455 SELTEIPSLK-------IGYNNVFGYYIEVRNTHKDKVPAEWIRKQTLANAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYAELVQSLSEFIPAIQINANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPN 561
A +NNY+RP++ + +L+I GRH + E + + +I ND +D+ + I IITGPN
Sbjct: 560 TAARENNYIRPVIADDDVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSQTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L + +SL L DE G+GT T DGI + + + + L TH E LN
Sbjct: 680 AADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 790
Query: 732 IKRAAYVLE 740
+KRA +L+
Sbjct: 791 VKRANDILK 799
>gi|116629083|ref|YP_814255.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238853826|ref|ZP_04644191.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282852792|ref|ZP_06262134.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
gi|122273919|sp|Q045Q5.1|MUTS_LACGA RecName: Full=DNA mismatch repair protein MutS
gi|116094665|gb|ABJ59817.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238833521|gb|EEQ25793.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282556534|gb|EFB62154.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
Length = 857
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 279/589 (47%), Gaps = 71/589 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-----NSPSFIYTASDW 285
L + + R + L + ++LK V D+ + + N+ + A
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSL 363
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A + SLL N L NF A I L +++L++ I
Sbjct: 364 GAIPDILNSLLETNNP-------------HLQNF------AKQIDP-LKGIHDLIVNTIV 403
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCI 403
N G L+REG D+LD R ++L E+ S E+ + +L +
Sbjct: 404 DNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------V 456
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + D ++ ++ T Y TP +E ++L+ +
Sbjct: 457 GYNKVFGYYIEVTNSNKDKVPTDR-------YTRKQTLTNAERYITPDLKEHESLILEAE 509
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K +E + L ++ + L K A LD + A V+ QNNY+RP T++
Sbjct: 510 AKSTGLEYDLFVKLRENVKKYIPALQKLAKQVASLDVLTNFATVSEQNNYVRPDFTVDKQ 569
Query: 524 -LDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+++ NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++
Sbjct: 570 EINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTDIFLITGPNMSGKSTYMRQMALIAIMAQ 629
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE
Sbjct: 630 IGCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEI 689
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLR 691
G+GT T DG+ L G + Y + V K L TH EL + + LK + V
Sbjct: 690 GRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTD-----LDQTLKHLKNIHVGA 743
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
E N ++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 744 TEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|325263900|ref|ZP_08130633.1| DNA mismatch repair protein MutS [Clostridium sp. D5]
gi|324030938|gb|EGB92220.1| DNA mismatch repair protein MutS [Clostridium sp. D5]
Length = 883
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 306/640 (47%), Gaps = 77/640 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R LR +
Sbjct: 262 TTGKYMMLDSSTRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARTLRKYVE 313
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P+++ E + RL+A+ + + E L V D+ ++ + S D TA
Sbjct: 314 QPLIEKEEILRRLDAVEELKGNAISREEIREYLTPVYDLERLITRITYGSA--NPRDLTA 371
Query: 288 FLKSICSLLHVNKIFEVGISE---SLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
S+ L HV I E S +R+ L D +E + I +I
Sbjct: 372 LCSSLEMLPHVKYILEEMQSPLLCGVRDDL-----DTLEDLCTLIKD----------AVI 416
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPC 402
D K G ++R+G+ +E+D LR + ++L ++ E + + +L
Sbjct: 417 DDPPLAMKE-GGIIRDGYSEEVDTLRHAKSDGKQWLAKLEEEEREKSGIKNLK------- 468
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y GY + + + + L + +R Y TP+ +EL++ +
Sbjct: 469 IKYNKVFGYYLEVT------NSYKDLVPDYYTRKQTLANAER--YITPELKELEDTILGA 520
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
K+ +E + + I + + K A LD F S+ALVA +NNY+RP + +
Sbjct: 521 EDKLYALEYELYSTVRDTIAGEVERIQKTAKAIAALDVFASIALVAERNNYVRPKINEKG 580
Query: 523 LLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLS 579
++DI++GRH + E + D FI NDT +D+ RI+IITGPN +GKS Y++Q ALIV ++
Sbjct: 581 IIDIKDGRHPVVEKMIPNDMFISNDTYLDDKKQRISIITGPNMAGKSTYMRQAALIVLMA 640
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
+GS+VPA A +GL D S + + QS+FM+++ +V +LR ATS+SL +LDE
Sbjct: 641 QLGSYVPASNANIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLLILDE 700
Query: 632 FGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DG+ + + Y T + K L TH EL EG K E + Y ++V
Sbjct: 701 IGRGTSTFDGLSIAWAVVEYISDTHLLGAKTLFATHYHELTELEG---KIENVNNYCIAV 757
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+DIVFL ++V G A SYG+ A LAGVP VI RA ++E +
Sbjct: 758 ------KEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDIVIDRAKEIVEELSDEDITT 811
Query: 750 RWS------HENISAQDQQYKNAVE--KMLAFDVLK-GDL 780
R S HE + + V+ +M FD +K GD+
Sbjct: 812 RVSEIAVKEHETKKKPKVKKYDEVDIAQMSLFDTVKDGDV 851
>gi|383124721|ref|ZP_09945383.1| DNA mismatch repair protein mutS [Bacteroides sp. 1_1_6]
gi|251841124|gb|EES69205.1| DNA mismatch repair protein mutS [Bacteroides sp. 1_1_6]
Length = 872
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACLEADNASLNRIG------EQLNLC-ISIRDRIAKEINNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--L 391
+ +N+ G ++++G +ELDELR+I ++L ++ E Q +
Sbjct: 417 PLL---------INK------GGVIKDGVNEELDELRRISYSGKDYLLQIQQRESEQTGI 461
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ +R K
Sbjct: 462 PSLK-------VAYNNVFGYYIEVRNIHKDKVPQEWIRKQTLV------NAERYITQELK 508
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
E + +LG KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 509 VYE-EKILG-AEDKILVLETQLYTDLVQALTEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANT 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|392398187|ref|YP_006434788.1| DNA mismatch repair protein MutS [Flexibacter litoralis DSM 6794]
gi|390529265|gb|AFM04995.1| DNA mismatch repair protein MutS [Flexibacter litoralis DSM 6794]
Length = 890
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 181/639 (28%), Positives = 306/639 (47%), Gaps = 83/639 (12%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
A+G +L LE T E E + I S+ V +K++ LD+ L++
Sbjct: 253 AAGAVLYYLE------TTEHHEKNH----IISLSRVEQDKYVWLDSFTTRNLELLV---- 298
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
P H G S+ +++K VTPMG RLLR W P+ D + + +RL ++ + +
Sbjct: 299 PMHAN------GCSLIEILDKTVTPMGARLLRKWVAFPLKDAKPIQNRLRNVATLVKKDA 352
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGIS 307
L L LK V D+ ++ K +P + D + I +L +K+ E+
Sbjct: 353 LQGELRSYLKEVGDLERLISKVAVARINPKELVKLRDSLEAIPPIKDILFKSKMNEL--- 409
Query: 308 ESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
E++ E++ +LN +I++K + EL + N GT ++ G ELD
Sbjct: 410 EAIGEKI-VLNNEILQK----LQNEL-----------EDNPPLNVQQGTTIKRGVNKELD 453
Query: 368 ELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQ 427
ELR I +FLE+V E++ + I + GY + + E
Sbjct: 454 ELRDISSSAKDFLEKVRQREII-----ATGITSLKISFNRVFGYYIEVSNAHKTKVPAEW 508
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
++ ++ Y TP+ +E + + KI +E A+ +LVS + +
Sbjct: 509 IRKQTLVNAER--------YITPELKEWEEKIVTAEDKISSIEYALYHNLVSEVAKYVRV 560
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPN 544
+ + + + LD LA VA QNNY P +T +L+I+ G+H + E + + ++PN
Sbjct: 561 IQQNAKYLSMLDALCGLAEVAMQNNYSEPEITDNNILEIREGKHPVIEKLLPIGEQYVPN 620
Query: 545 DTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D ++ + +I IITGPN +GKS ++Q ALIV ++ IGSFV A +A +G+ D
Sbjct: 621 DVIMNPESEQIFIITGPNMAGKSALLRQTALIVLMAQIGSFVSAKSAKIGVVDKVFTRVG 680
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S ++ +S+FM+++ + +L + +SL L+DE G+GT T DGI + + Y +
Sbjct: 681 ASDNIAKGESTFMVEMSETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWAIVEYLHSL 740
Query: 656 -DVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
+ PK L TH L EL N+ +R+K Y +SV I+FL +L G
Sbjct: 741 PNAKPKTLFATHYHELNELKND-----FDRIKNYNVSVKEVGGK------IIFLRKLKEG 789
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
+ S+G++ A LAG+P EV+ RA+ ++ + NK E+
Sbjct: 790 GSEHSFGINVASLAGMPKEVVLRASEMMHHFETNKFAEK 828
>gi|298385787|ref|ZP_06995344.1| DNA mismatch repair protein MutS [Bacteroides sp. 1_1_14]
gi|298261015|gb|EFI03882.1| DNA mismatch repair protein MutS [Bacteroides sp. 1_1_14]
Length = 872
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACLEADNASLNRIG------EQLNLC-ISIRDRIAKEINNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--L 391
+ +N+ G ++++G +ELDELR+I ++L ++ E Q +
Sbjct: 417 PLL---------INK------GGVIKDGVNEELDELRRISYSGKDYLLQIQQRESEQTGI 461
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ +R K
Sbjct: 462 PSLK-------VAYNNVFGYYIEVRNIHKDKVPQEWIRKQTLV------NAERYITQELK 508
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
E + +LG KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 509 VYE-EKILG-AEDKILVLETQLYTDLVQALTEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANT 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|317474657|ref|ZP_07933931.1| DNA mismatch repair protein MutS [Bacteroides eggerthii 1_2_48FAA]
gi|316909338|gb|EFV31018.1| DNA mismatch repair protein MutS [Bacteroides eggerthii 1_2_48FAA]
Length = 871
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 175/609 (28%), Positives = 296/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 253 ITSLARIEEDKYVRLDKFTVCSLELMGS------MNDG----GSSLLNVIDRTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWMVFPLKDVQPINERLNVVEYFFRKPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K C SL H+ + ++ I S+R++
Sbjct: 363 REVVALKVALQAVEPIKEACMDADNASLNHIGE--QLNICRSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELRQI ++L +V E
Sbjct: 407 -IDKEVNNDPPLLIN-----------KGGVIKSGVNAELDELRQIAYSGKDYLLQVQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L +P L I Y + GY + + D E ++ ++
Sbjct: 455 SELTGIPSLK-------IGYNNVFGYYIEVRNVHKDKVPQEWIRKQTLVNAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYTELVQSLSEFIPAIQINANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPN 561
A +NNY+RP+++ + +L+I GRH + E + + +I ND +D+ +I IITGPN
Sbjct: 560 TAARENNYIRPVISDDEVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSSTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI ++ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLMAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L +S+SL L DE G+GT T DGI + + Y + L TH E LN
Sbjct: 680 AADILNNLSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPRAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 790
Query: 732 IKRAAYVLE 740
+KRAA +L+
Sbjct: 791 VKRAADILK 799
>gi|448605562|ref|ZP_21658188.1| DNA mismatch repair protein MutS [Haloferax sulfurifontis ATCC
BAA-897]
gi|445741588|gb|ELZ93087.1| DNA mismatch repair protein MutS [Haloferax sulfurifontis ATCC
BAA-897]
Length = 919
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 211/774 (27%), Positives = 351/774 (45%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P + +
Sbjct: 117 QFLAAVVTAGDGVGLAFADITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPDL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFSTEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELIET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L RL+A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRLDAVESLASAALARERVREVLDGAYDLERLASRSASGSARASDLLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + ++ + ++E + R AA+ + ELA + + K
Sbjct: 372 LADAIEGTELADSPLAEVVARPDR--------DAAADLRAELADA-------LAEDPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L ++G+ D+LD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFQKGYDDDLDDLIERHESAKSWLDTLADREKRAHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRFV---------TEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + DL + ++ L AE+D SLA A N + RP LT L
Sbjct: 524 ELFE-------DLRERVARRAELLQDVGRTIAEIDALASLATHAAGNGWTRPELTDAGAL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND R+D+D I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLRMDDDRGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|149200634|ref|ZP_01877637.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
gi|149136283|gb|EDM24733.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
Length = 837
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/561 (28%), Positives = 276/561 (49%), Gaps = 61/561 (10%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I R + ++ ++++C TPMG RLLR W LRP+ ++E + R + +S F + L+ L
Sbjct: 283 IFRDSKNSTLISVLDECSTPMGSRLLREWLLRPLTNIEAITQRQDTLSSFCSDQMLLEEL 342
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLR 315
E+ + V+DI IL + N + A + ++ ++ + I S+ L + + R
Sbjct: 343 RESFRTVRDIERILTRLNLGT--ANARELQTIAWALKAIPDIESIISYVDSDLLSDIKSR 400
Query: 316 LLNF-DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYE 374
L NF ++ + +T E + G ++ +G+ D+LD R+
Sbjct: 401 LFNFPELTDTLLQALTDEPPATLK---------------DGGIISDGYNDQLDHFRKGSR 445
Query: 375 ELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
E +L E E + L +IGY +F ++ + + Q E
Sbjct: 446 EGKAWLARFEAQEKERTGIKKL-------------KIGY-NRVFGYYIELSKINSAQAPE 491
Query: 433 -FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
+ +R Y TP+ +E+++ + K +E + ++L + + +
Sbjct: 492 DYIRKQTLANAER--YITPELKEIEDSVLGAEEKAKALEYELFQELRLKVTEKTKEIQST 549
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRI- 548
AELDC +LA VA + +Y+RP L E ++I +GRH + E +D F+PNDT +
Sbjct: 550 AIALAELDCLANLAYVALKRSYIRPQLCEEKKINISDGRHPVVEAAMDAGIFVPNDTDMN 609
Query: 549 DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH--------M 600
D+ IN++TGPN +GKS YI+QVAL+ ++ +GSF+P A +G+TDS + +
Sbjct: 610 DHQASINLVTGPNMAGKSTYIRQVALLTIMAQMGSFIPCSKAEIGITDSIYTRIGAADDL 669
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPK 660
+ QS+FM+++ + +L A +SL +LDE G+GT T DG+ L + D
Sbjct: 670 SRGQSTFMVEMVETANILNNAGPRSLVILDEIGRGTSTYDGLSLAWAIAEHL--HDAGCL 727
Query: 661 VLVCTHLTELLNEGC-LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
L TH EL G LPK +K + ++V + I+FL+++ G A SYG+
Sbjct: 728 TLFATHYHELTKLGASLPK---VKNWCVAVHESKGK------IIFLHKIQAGAADRSYGI 778
Query: 720 HCALLAGVPAEVIKRAAYVLE 740
+ A LAG+P VIKRA +L+
Sbjct: 779 YVAKLAGIPKSVIKRADNILQ 799
>gi|212550741|ref|YP_002309058.1| DNA mismatch repair protein MutS [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548979|dbj|BAG83647.1| DNA mismatch repair protein MutS [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 883
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 285/577 (49%), Gaps = 87/577 (15%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G S+ +++K VT +G R+LR W + P+ +E + RL+ + +FL S + L + L
Sbjct: 288 GQSLLKVLDKTVTSVGARMLRKWIVFPLKKIEQIEGRLSIVEYFLKSSTVKDLLEKQLNQ 347
Query: 263 VKDIPHILKKFN----SP---SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
+ D+ ++ K + +P + I A D +K IC + + ++G EQL
Sbjct: 348 ISDLERLISKVSVGKANPYEVAQIKIALDAIIPIKEICLDCSIGSLKQIG------EQLN 401
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L + +I EK I EL+ +++ G ++ EG ELDELRQI
Sbjct: 402 LCS-EIREK----IQRELSADPPVLLS-----------KGNVIAEGINGELDELRQIVYS 445
Query: 376 LPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQG 430
+ L ++ E+ Q +P L + Y + GY + + +++K+ +
Sbjct: 446 GKDHLLKIQQREIFQTGIPSLK-------VGYNNVFGYYIEVRHSYKKKIPSNWIR---- 494
Query: 431 FEFAFSDMDGETKRLFYHTPK--TREL----DNLLGDIYHKILDMERAITRDLVSHICLF 484
K+ H + T EL + +LG +I++ME I LVS + +
Sbjct: 495 ------------KQTLVHAERYITEELKIYEEKILG-AEDRIIEMETDIFNSLVSKLSKY 541
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTF 541
+ AE+DC LS A +A QN+Y+RP + ++DI+ GRH + E + + +
Sbjct: 542 IIPIQINARLIAEIDCLLSFAKIAEQNHYVRPQIDASRIIDIKKGRHPVIETQLQPDELY 601
Query: 542 IPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
+PND +DND + I IITGPN +GKS ++Q ALI ++ IGSFVPAD+A +G D
Sbjct: 602 VPNDIYLDNDKQQIIIITGPNMAGKSALLRQTALITLMAQIGSFVPADSARIGWVDKIFA 661
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S +++ +S+FM+++ + +L + +SL + DE G+GT T DGI + + Y
Sbjct: 662 RVGASDNISLGESTFMVEMSEAADILNNLSDRSLIIFDELGRGTSTYDGISIAWAIVEYI 721
Query: 653 VTCDVP-PKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
PK L TH E LNE + K ER+K Y +SV +N ++FL +L
Sbjct: 722 HEHPTSHPKTLFSTHYHE-LNE--MEKYFERIKNYNISVKEIDNK------VIFLRKLAR 772
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
G + S+G+H A +AG+P V++R +L + N
Sbjct: 773 GGSKHSFGIHVAKMAGIPKNVVQRGHEILFQLETNNQ 809
>gi|393782642|ref|ZP_10370825.1| DNA mismatch repair protein mutS [Bacteroides salyersiae
CL02T12C01]
gi|392672869|gb|EIY66335.1| DNA mismatch repair protein mutS [Bacteroides salyersiae
CL02T12C01]
Length = 871
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 180/646 (27%), Positives = 311/646 (48%), Gaps = 89/646 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D + + G+ I ++ + +K+++LD +L++ +
Sbjct: 234 ASGAILQYL------DMTQHTQIGH----ITALSRIEEDKYVRLDKFTVRSLELIGS--- 280
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG R+L+ W + P+ D + +N RLN + +F E
Sbjct: 281 ---MNDG----GSSLLNVIDKTISPMGARMLKRWMVFPLKDEKPINDRLNVVEYFFREPE 333
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
+ E L + D+ I+ K SP + A +K+ C + +
Sbjct: 334 FKELIEEQLHLIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKAACMQADNASLNRI 393
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L CI+ + + + ++ + G ++++G
Sbjct: 394 G------EQLNL-----------CIS-----IRDRIDKEVNNDPPLLINKGGVIKDGVNA 431
Query: 365 ELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI +FL ++ E Q +P L I Y GY + + D
Sbjct: 432 ELDELRQIAYSGKDFLLKIQQRESEQTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 484
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 485 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 536
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC LSLA +A +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 537 EFIPAIQINANQIARIDCLLSLANIARENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGE 596
Query: 540 TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +D+ +I IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 597 KYIANDVMLDSTTQQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESARIGLVDKI 656
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 657 FTRVGASDNISVGESTFMVEMNEAADILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVE 716
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 717 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKL 767
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
G + S+G+H A +AG+P +++RA +L+ +++ + S++
Sbjct: 768 ERGGSEHSFGIHVAKMAGMPKSIVRRANEILKQLESDNRQQGISNK 813
>gi|339443299|ref|YP_004709304.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
gi|338902700|dbj|BAK48202.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
Length = 888
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 187/648 (28%), Positives = 307/648 (47%), Gaps = 86/648 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G LL L E +++G +T + S +++ +D++ L++ +T
Sbjct: 241 VTAAGSLLKYL--------YETQKNGMTQLT--KIEPYSTGRYMVIDSSTRRNLELTETL 290
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI----SF 245
+ + G S+ +++K T MG R LR++ +P++D + +N RL+A+
Sbjct: 291 REKNKRG--------SLLWVLDKTKTAMGARTLRSYIEQPLIDRKEINQRLDAVEELKKN 342
Query: 246 FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVG 305
+ EEL L+ + I I+ + +P D AF SI L + +I +
Sbjct: 343 MIGREELREYLNPIYDLERLISRIVYQNANPR------DLIAFRNSIAMLPPIREILKDF 396
Query: 306 ISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDE 365
E L++ + ++ +L+ ++ L+ I + ++REG+ +E
Sbjct: 397 SCELLQQINQRMD-------------DLSDLFSLIQASITEDPPVSVREAGIIREGYSEE 443
Query: 366 LDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT 423
D LR + +L + E + +L I Y GY + + D
Sbjct: 444 ADRLRSARSDGRSWLARIEQEEKEKTGIRNLR-------IKYNKVFGYYLEVTNSYRD-- 494
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
L F +R Y TP+ +EL+ + K+ +E + ++ S I
Sbjct: 495 ----LVPDYFIRKQTLTNAER--YITPELKELEETILGASDKLNALEYDLFCEIRSKIAG 548
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTF 541
+ + AELD F+SLA VA N Y+RP + + + I GRH + E + D F
Sbjct: 549 QVVRIQQTARAVAELDVFVSLAQVADSNGYVRPKINEKGSIRITEGRHPVVERMIRNDMF 608
Query: 542 IPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
IPND +DN RI IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A++G+ D
Sbjct: 609 IPNDMTLDNHSNRIAIITGPNMAGKSTYMRQNALIVLMAQIGSFVPAKSASIGIVDRIFT 668
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S + + QS+FM+++ +V +LR AT+ SL +LDE G+GT T DG+G+ + Y
Sbjct: 669 RVGASDDLASGQSTFMVEMTEVANILRNATASSLLILDEIGRGTSTIDGLGIAWAVVEYI 728
Query: 653 VTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ K L TH EL EG L + + Y ++V +DIVFL ++VP
Sbjct: 729 SNPKLLGAKTLFATHYHELTELEGKL---DAVHNYCVAV------REKGDDIVFLRKIVP 779
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G SYG+ A +AGVP VI+RA + E +E+ +NI+A
Sbjct: 780 GGTDRSYGIQVAKIAGVPDPVIRRAKEICE------ELEKSGLQNIAA 821
>gi|189464859|ref|ZP_03013644.1| hypothetical protein BACINT_01203 [Bacteroides intestinalis DSM
17393]
gi|189437133|gb|EDV06118.1| DNA mismatch repair protein MutS [Bacteroides intestinalis DSM
17393]
Length = 872
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 184/649 (28%), Positives = 307/649 (47%), Gaps = 94/649 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELVGS------MNDG----GSSLLNVIDKTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D+ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWLVFPLKDVLPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL +I + I E+
Sbjct: 364 REVVALKVALQAIEPIKEACMEADNASLNRIG------EQL-----NICKSIRDRIEKEI 412
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQL 391
L+I G +++ G ELDELRQI ++L ++ E L ++
Sbjct: 413 NNDPPLLIN-----------KGGVMKSGVNAELDELRQIAYSGKDYLLQIQQRESELTEI 461
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L I Y + GY + + D E ++ A ++ Y T +
Sbjct: 462 PSLK-------IGYNNVFGYYIEVRNTHKDKVPQEWIRKQTLANAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + +LV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILILETQLYTELVQALSEFIPAIQVNANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSSSQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+ +SL L DE G+GT T DGI + + + + L TH E LNE + K
Sbjct: 687 NLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRAND 797
Query: 738 VLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRL-FFQ 785
+L + + A ++Q A + M +G ++L FFQ
Sbjct: 798 IL--------------KQLEADNRQQGIASKPMAEVGETRGGMQLSFFQ 832
>gi|308271253|emb|CBX27862.1| DNA mismatch repair protein mutS [uncultured Desulfobacterium sp.]
Length = 875
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 204/745 (27%), Positives = 347/745 (46%), Gaps = 92/745 (12%)
Query: 10 HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALK 69
+ VG+S D S + E N L + ++ A +I+ + + FLS L
Sbjct: 135 YSDNVGISCIDISTGLFRLTE----GNDLLSLAEEIRRVAPSEILLPESSKNDRFLSGL- 189
Query: 70 RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQ 129
+G P L ++ F Y++ RLI L T +G +++ +
Sbjct: 190 -VNGLNGIPITYLDDNN-FDYKKCRERLIGLFRTFSLEGFGCEDK------------KAG 235
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G L+ ++ QK+S +I++ +L+K+L +D T+ + L+IF+
Sbjct: 236 ICAAGALVFYIKET-------QKQSAGHFSSIETY---NLDKYLLIDETSCQNLEIFKNI 285
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ S G ++ G+++ +TPMG RL+R+W P+ + E + RL+A+
Sbjct: 286 RTGSKHG--------TLLGVLDSTLTPMGGRLMRSWLRYPLQNREEILYRLDAVEELKND 337
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
++ E L V DI + K A D A S+ +L + I +E+
Sbjct: 338 VTSRRNIREQLNTVYDIERLGSKIVMGH--SNARDLVALKNSLLTLPSIKYI-----AEN 390
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L+ + + +I EL+ + +L+ I + G L++EGF +ELD L
Sbjct: 391 LKSSFFVWDSEI---------GELSVLAQLIDKAIREDAPPVINEGGLIKEGFSEELDIL 441
Query: 370 RQIYEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIF--EEKLDDTTLE 426
+ + +L ++ + E + + K F Y ++ F + TL
Sbjct: 442 IRAGSQGKGWLAKLEAKEKEETKINSLKVRFNKVFGYYIEVSKAQAKFVPSHYIRKQTLV 501
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
+ R K E D L IL+ E + + + +
Sbjct: 502 NAE--------------RYITDELKQYEKDILNSQDRRNILEYE--LFTQIRENAAKLNP 545
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEM-TVDTFIPN 544
+ + F A LDC + + VAH+NNY RP L E L+ I+ GRH V+++M T + F+PN
Sbjct: 546 LIQQVAGFIARLDCINAFSEVAHENNYSRPDLNDEGLISIEEGRHPVVEKMITGERFVPN 605
Query: 545 DTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS------ 597
+D+ + +I IITGPN +GKS ++QVALIV ++HIGSFVPA A++ +TD
Sbjct: 606 SIMMDDENNQILIITGPNMAGKSTVLRQVALIVLMAHIGSFVPAAKASINITDKIFTRVG 665
Query: 598 --KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
++++ QS+FM+++ + +L ++S+SL ++DE G+GT T DGI + Y
Sbjct: 666 ALDNLSSGQSTFMVEMQETANILNNSSSRSLVIMDEIGRGTSTFDGISIAWAVAEYLHDL 725
Query: 656 DVPP-KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
D K L TH EL++ ER+K + ++L E N ++IVFL +LV G
Sbjct: 726 DGKGVKTLFATHYHELIDLAL--TKERVKNF--NILVKEWN----DEIVFLRKLVDGGTN 777
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVL 739
SYG+ A LAG+P ++I RA +L
Sbjct: 778 RSYGIQVARLAGIPGKIIARAKKIL 802
>gi|289432904|ref|YP_003462777.1| DNA mismatch repair protein MutS [Dehalococcoides sp. GT]
gi|288946624|gb|ADC74321.1| DNA mismatch repair protein MutS [Dehalococcoides sp. GT]
Length = 858
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 184/639 (28%), Positives = 311/639 (48%), Gaps = 90/639 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G LL LE E +L+Q E + T D ++++D+ L+IF++
Sbjct: 227 ISAAGALLNYLE-ETQKSSLKQLERLSVYTTAD---------YMQMDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L ++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGILDQTKTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV----- 304
SL ++L + D+ + + + + + + S+ ++ +++ F +
Sbjct: 329 SLARTSLAKSLGQIADMERMANRIRQKTIL--PRELISLKNSLETVSAIHRQFGLMPPPR 386
Query: 305 ------GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
G+ + L E L ++N I + S + G G ++
Sbjct: 387 LAYFLNGL-KPLPEMLDIINKTITDDPPSTL-----------------------GDGKVI 422
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
R GF E+D+L + + FL ++ + E + K + + Y GY + I
Sbjct: 423 RAGFDPEMDKLCSLAGDARTFLSQMETRERERTG--IKSL---KLGYNRVFGYYIEISNA 477
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
L D E ++ ++ + TPK +E +NL+ + ++L+ME + ++
Sbjct: 478 NLGDVPPEFIRKQTLVNAER--------FITPKLKEYENLILNAKERLLEMETGLYEQVL 529
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEM 536
+ + F LL A LD + A VA +N+Y+RP+ E LDI+ GRH V Q +
Sbjct: 530 NQLGGFYSALLANAAALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGL 589
Query: 537 TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+ ND + D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LT
Sbjct: 590 GYGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLT 649
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ +
Sbjct: 650 DRIFTRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQA 709
Query: 648 TINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + + K L TH EL+ LP R+K Y ++V S D ++VFL
Sbjct: 710 VVEYIHSQPSLTAKTLFATHYHELVELASYLP---RVKNYNIAV------SEDRGEVVFL 760
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+++VPG SYG+H A LAG+P VIKRA VL +N
Sbjct: 761 HKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTELEN 799
>gi|336421688|ref|ZP_08601844.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000159|gb|EGN30312.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
5_1_57FAA]
Length = 882
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 288/595 (48%), Gaps = 76/595 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R LR +
Sbjct: 262 ATGKYMLLDSSTRRNLELCETLREKHKRG--------SLLWVLDKTKTAMGARCLRKFIE 313
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D ++ RL+A+ + + E L V D+ ++ K S D A
Sbjct: 314 QPLIDKNSIERRLDAVDELKQNAISREEIREYLTPVYDLERLVCKITYQSA--NPRDLIA 371
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
F S+ L H+ I E S L++ L D +E +L ++ E I
Sbjct: 372 FKSSLSMLPHIKYILEEMKSPLLKDLYERL--DTLE--------DLCHLVEKAIKEDPPL 421
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVY 405
KE G ++R+G+ +E+D LR + ++L E E + +L I Y
Sbjct: 422 AMKE---GGIIRDGYNEEVDRLRSAKSDGKDWLAKLETDEREKTGIKNLK-------IRY 471
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGD 461
GY LE F+ D + L Y P+ +EL++ +
Sbjct: 472 NKVFGYY------------LEVTNSFKHMVPDYYTRKQTLANAERYIIPELKELEDTILG 519
Query: 462 IYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
K+ +E + RD ++ L KA+ A+LD F S+ALVA Q+ Y+RP +
Sbjct: 520 AEDKLYALEYQLYCEARDKIAKEVLRIQTTAKAI---AQLDAFASMALVAEQSRYVRPKI 576
Query: 519 TLEPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALI 575
+ ++DI++GRH + E + D FI NDT + D RI+IITGPN +GKS Y++Q ALI
Sbjct: 577 NEKGVIDIKDGRHPVVEKMIPNDMFISNDTYLNDKKNRISIITGPNMAGKSTYMRQTALI 636
Query: 576 VFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V ++ IGSFVPA +A +GL D S + + QS+FM+++ +V +LR ATS+SL
Sbjct: 637 VLMAQIGSFVPAASADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLL 696
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
+LDE G+GT T DG+ + I + + + K L TH EL EG K + + Y
Sbjct: 697 ILDEIGRGTSTFDGLSIAWAVIEHISSSRLLGAKTLFATHYHELTELEG---KIDNVNNY 753
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++V +DI+FL ++V G A SYG+ A LAGVP V RA ++E
Sbjct: 754 CIAV------KEKGDDIIFLRKIVKGGADKSYGIQVARLAGVPESVTSRAREIVE 802
>gi|332881597|ref|ZP_08449246.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357045679|ref|ZP_09107314.1| DNA mismatch repair protein MutS [Paraprevotella clara YIT 11840]
gi|332680595|gb|EGJ53543.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355531541|gb|EHH00939.1| DNA mismatch repair protein MutS [Paraprevotella clara YIT 11840]
Length = 902
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 284/585 (48%), Gaps = 61/585 (10%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G S+ G++++ +TPMG RL+R W L P+ D + +N RL+ + +F E + + L
Sbjct: 315 GNSLLGVIDRTITPMGARLMRRWILFPLKDEKPVNERLDVVDYFFREPEFKELISDQLHL 374
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNF 319
+ D+ I+ K + + D ++ ++ + E E+L+ EQL L
Sbjct: 375 MGDLERIISKVSVGRV--SPRDVVQLKVALQAIEPIKTACEHASDETLKRIGEQLNLCA- 431
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
I ++ A + + + VN+ G ++ EG ELDELR I E ++
Sbjct: 432 SIRDRIAREVQNDPPLL---------VNK------GGVIAEGVDRELDELRHIAFEGKDY 476
Query: 380 LEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
L ++ EL +P L I Y + GY + + D + ++ ++
Sbjct: 477 LLKIQQRETELTGIPSLK-------ISYNNVFGYYLEVRNTHKDKVPADWIRKQTLVNAE 529
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y T + +E + + KIL +E + DLV + F+ + N A
Sbjct: 530 R--------YITQELKEYEEKIMGAQDKILVLETKLYNDLVLALAEFTPAIQINANLLAR 581
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTV-DTFIPNDTRIDNDG-R 553
LDC LS A VA N Y+RP++ + +LDI+ GRH + +E+ V + +I ND +D + +
Sbjct: 582 LDCLLSFAQVAQDNRYIRPVIQDDDVLDIKQGRHPVIEKELPVGEQYIANDVYLDTEKQQ 641
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I IITGPN +GKS ++Q ALI ++ IG FVPA++A +GL D S +++ +S
Sbjct: 642 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISMGES 701
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVC 664
+FM+++++ +L +S+SL L DE G+GT T DGI + + Y + L
Sbjct: 702 TFMVEMNEAANILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHENKKGRARTLFA 761
Query: 665 THLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH EL E P R+K Y +SV + + ++FL +L G + S+G+H A
Sbjct: 762 THYHELNEMEKLYP---RVKNYNVSVREVD------QKVIFLRKLERGGSEHSFGIHVAK 812
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVE 768
LAG+P ++ RA +L+ ++ + + + Q Q N V+
Sbjct: 813 LAGMPKSIVSRANTILKELESANSKDVMKNSRGAKQVMQADNGVQ 857
>gi|452205388|ref|YP_007485517.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi BTF08]
gi|452112444|gb|AGG08175.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi BTF08]
Length = 858
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 184/639 (28%), Positives = 311/639 (48%), Gaps = 90/639 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G LL LE E +L+Q E + T D ++++D+ L+IF++
Sbjct: 227 ISAAGALLNYLE-ETQKSSLKQLERLSVYTTAD---------YMQMDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L ++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGILDQTRTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV----- 304
SL ++L + D+ + + + + + + S+ ++ +++ F +
Sbjct: 329 SLARTSLAKSLGQIADMERMANRIRQKTIL--PRELISLKNSLETVSAIHRQFGLMPPPR 386
Query: 305 ------GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
G+ + L E L ++N I + S + G G ++
Sbjct: 387 LAYFLNGL-KPLPEMLDIINKTITDDPPSTL-----------------------GDGKVI 422
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
R GF E+D+L + + FL ++ + E + K + + Y GY + I
Sbjct: 423 RAGFDPEMDKLCSLAGDARTFLSQMETRERERTG--IKSL---KLGYNRVFGYYIEISNA 477
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
L D E ++ ++ + TPK +E +NL+ + ++L+ME + ++
Sbjct: 478 NLGDMPPEFIRKQTLVNAER--------FITPKLKEYENLILNAKERLLEMETGLYEQVL 529
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEM 536
+ + F LL A LD + A VA +N+Y+RP+ E LDI+ GRH V Q +
Sbjct: 530 NQLGGFYSALLANAAALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGL 589
Query: 537 TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+ ND + D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LT
Sbjct: 590 GYGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLT 649
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ +
Sbjct: 650 DRIFTRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQA 709
Query: 648 TINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + + K L TH EL+ LP R+K Y ++V S D ++VFL
Sbjct: 710 VVEYIHSQPSLTAKTLFATHYHELVELASYLP---RVKNYNIAV------SEDRGEVVFL 760
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+++VPG SYG+H A LAG+P VIKRA VL +N
Sbjct: 761 HKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTELEN 799
>gi|283797910|ref|ZP_06347063.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
gi|291074377|gb|EFE11741.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
Length = 881
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 298/629 (47%), Gaps = 76/629 (12%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
++ + +++ LD + L++ +T + G ++ +++K T MG R+L
Sbjct: 251 AITPYTTGQYMMLDTSTRRNLELTETLREKQKRG--------TLLWVLDKTKTAMGARML 302
Query: 223 RNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSF 278
R++ +P++D E + +R NAI ++ EE+ L+ + I I K +P
Sbjct: 303 RSFVEQPLIDREGILARQNAIEELNMNYISREEMAEYLNAIYDLERLIGRISYKTANPR- 361
Query: 279 IYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE 338
D AF S+ L H+ KI ++ LRE D +E+ + I E A V +
Sbjct: 362 -----DLIAFKNSLAMLPHIKKILGEFGADLLREVDS--GMDTLEELTALI--EHAIVDD 412
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCK 396
I + D G ++++G+ +E D LR E ++L E E + +L K
Sbjct: 413 PPISVRD---------GGIIKDGYSEEADRLRHAKTEGKDWLAALEAEEREKTGIKNL-K 462
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
F Y ++ F++++ D F T + T + +EL+
Sbjct: 463 IKFNKVFGYYFEV---TNSFKDQVPD-----------YFVRRQTLTNAERFTTDRLKELE 508
Query: 457 NLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+ ++ +E + RD KA+ A LD +SL+ VA ++NY
Sbjct: 509 GTILGAEDRLFSLEYDLFCQVRDTAGAQVEKIQQTAKAI---ALLDVLISLSTVATRHNY 565
Query: 514 MRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIK 570
++P + ++ I+NGRH V Q M D F+ NDT +DN RI+IITGPN +GKS Y++
Sbjct: 566 VKPKINERGVIHIKNGRHPVVEQMMRDDMFVSNDTYLDNGKNRISIITGPNMAGKSTYMR 625
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q ALI ++ IGSFVPAD A +GL D S + + QS+FM+++ +V +LR AT
Sbjct: 626 QTALITLMAQIGSFVPADEANIGLCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 685
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSE 680
SL +LDE G+GT T DG+ + + Y T + K L TH EL EG +
Sbjct: 686 RNSLLILDEIGRGTSTFDGLSIAWAVVEYISNTKTLGAKTLFATHYHELTELEGAISG-- 743
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ Y ++V +N IVFL ++V G A SYG+ A LAGVP +VI RA ++E
Sbjct: 744 -VNNYCIAVKEQGDN------IVFLRKIVKGGADKSYGIQVAKLAGVPEQVITRAKELVE 796
Query: 741 AAQNNKHVERWSHENISAQDQQYKNAVEK 769
+ R ++ Q K +VE+
Sbjct: 797 ELSDADITARAKEIASGSRTVQPKKSVER 825
>gi|167758190|ref|ZP_02430317.1| hypothetical protein CLOSCI_00528 [Clostridium scindens ATCC 35704]
gi|167664087|gb|EDS08217.1| DNA mismatch repair protein MutS [Clostridium scindens ATCC 35704]
Length = 876
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 288/595 (48%), Gaps = 76/595 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ K++ LD++ L++ +T + G S+ +++K T MG R LR +
Sbjct: 256 ATGKYMLLDSSTRRNLELCETLREKHKRG--------SLLWVLDKTKTAMGARCLRKFIE 307
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D ++ RL+A+ + + E L V D+ ++ K S D A
Sbjct: 308 QPLIDKNSIERRLDAVDELKQNAISREEIREYLTPVYDLERLVCKITYQSA--NPRDLIA 365
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
F S+ L H+ I E S L++ L D +E +L ++ E I
Sbjct: 366 FKSSLSMLPHIKYILEEMKSPLLKDLYERL--DTLE--------DLCHLVEEAIKEDPPL 415
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVY 405
KE G ++R+G+ +E+D LR + ++L E E + +L I Y
Sbjct: 416 AMKE---GGIIRDGYNEEVDRLRSAKSDGKDWLAKLETDEREKTGIKNLK-------IRY 465
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF----YHTPKTRELDNLLGD 461
GY LE F+ D + L Y P+ +EL++ +
Sbjct: 466 NKVFGYY------------LEVTNSFKHMVPDYYTRKQTLANAERYIIPELKELEDTILG 513
Query: 462 IYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
K+ +E + RD ++ L KA+ A+LD F S+ALVA Q+ Y+RP +
Sbjct: 514 AEDKLYALEYQLYCEARDKIAKEVLRIQTTAKAI---AQLDAFASMALVAEQSRYVRPKI 570
Query: 519 TLEPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALI 575
+ ++DI++GRH + E + D FI NDT + D RI+IITGPN +GKS Y++Q ALI
Sbjct: 571 NEKGVIDIKDGRHPVVEKMIPNDMFISNDTYLNDKKNRISIITGPNMAGKSTYMRQTALI 630
Query: 576 VFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V ++ IGSFVPA +A +GL D S + + QS+FM+++ +V +LR ATS+SL
Sbjct: 631 VLMAQIGSFVPAASADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSKSLL 690
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
+LDE G+GT T DG+ + I + + + K L TH EL EG K + + Y
Sbjct: 691 ILDEIGRGTSTFDGLSIAWAVIEHISSSRLLGAKTLFATHYHELTELEG---KIDNVNNY 747
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++V +DI+FL ++V G A SYG+ A LAGVP V RA ++E
Sbjct: 748 CIAV------KEKGDDIIFLRKIVKGGADKSYGIQVARLAGVPESVTSRAREIVE 796
>gi|427414199|ref|ZP_18904389.1| DNA mismatch repair protein MutS [Veillonella ratti
ACS-216-V-Col6b]
gi|425714575|gb|EKU77578.1| DNA mismatch repair protein MutS [Veillonella ratti
ACS-216-V-Col6b]
Length = 903
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/557 (29%), Positives = 276/557 (49%), Gaps = 59/557 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++K +TPMG RLL+ W P++D+ ++ R AI+ + L E LK +
Sbjct: 289 TLLQVLDKTLTPMGARLLKQWVESPLMDIHHIERRQRAITELIVKPTEQGRLRELLKLIF 348
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D IL + + S + D+T+ +S+ L + I G+ ES Q + D
Sbjct: 349 DFERILARVETGSV--SPRDFTSLRESLRILPDLVTI--AGVFESTLLQETVSQID---- 400
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL---- 380
C T VY+L+ I + G ++R+GF ELD+LR + E+L
Sbjct: 401 ---CHTD----VYDLLNRAIAEQPALTLKDGRVIRDGFNQELDDLRSMATNSQEWLHRLE 453
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
EE S ++L ++F GY + D ++ A ++
Sbjct: 454 EEARSKTGIRLKTGYNKVF----------GYYFEVSHANAADVPDYFIRKQTLANAER-- 501
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y TP+ +E + + KI+ +E+ + +++ + + A LD
Sbjct: 502 ------YITPELKEFEVNILSAKDKIISLEQKLYQEIRESVKAAVKPIQATARALANLDV 555
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGR-INII 557
LA VA++ NY+ P +T+ + I++GRH + E + + F+PND ++++G +I
Sbjct: 556 LSGLAQVAYEENYICPTMTMNGQITIRDGRHPVIEKFLKREVFVPNDVTLNHNGEEFLLI 615
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++QVA+++ ++ IGSF+PA A + D S ++ QS+FM+
Sbjct: 616 TGPNMAGKSTYMRQVAVLMIMAQIGSFIPAREAVISPVDRIFTRVGASDDISTGQSTFMV 675
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++ +V +L ATS SL +LDE G+GT T DG+ + + Y + + K L TH E
Sbjct: 676 EMKEVAYILNNATSNSLLILDEIGRGTSTFDGLSIAQAVVEY-ICKHIHGKTLFATHYHE 734
Query: 670 LLNEGCLPKSE-RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVP 728
L+ CL + +LK YT++V +D+VFL R+V G A SYG+H A LAG+P
Sbjct: 735 LI---CLEEQYVKLKNYTVAV------KEKGKDVVFLRRIVRGGADRSYGIHVAKLAGLP 785
Query: 729 AEVIKRAAYVLEAAQNN 745
V+KRA +L A + +
Sbjct: 786 NSVLKRAEVILAALEGS 802
>gi|218131725|ref|ZP_03460529.1| hypothetical protein BACEGG_03346 [Bacteroides eggerthii DSM 20697]
gi|217986028|gb|EEC52367.1| DNA mismatch repair protein MutS [Bacteroides eggerthii DSM 20697]
Length = 871
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 295/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 253 ITSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDRTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWMVFPLKDVQPINERLNVVEYFFRKPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K C SL H+ + ++ I S+R++
Sbjct: 363 REVVALKVALQAVEPIKEACMDADNASLNHIGE--QLNICRSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G LDELRQI ++L +V E
Sbjct: 407 -IDKEVNNDPPLLIN-----------KGGVIKSGVNAGLDELRQIAYSGKDYLLQVQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L +P L I Y + GY + + D E ++ ++
Sbjct: 455 SELTGIPSLK-------IGYNNVFGYYIEVRNVHKDKVPQEWIRKQTLVNAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYTELVQSLSEFIPAIQINANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPN 561
A +NNY+RP+++ + +L+I GRH + E + + +I ND +D+ +I IITGPN
Sbjct: 560 TAARENNYIRPVISDDEVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSSTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI ++ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLMAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L +S+SL L DE G+GT T DGI + + Y + L TH E LN
Sbjct: 680 AADILNNLSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPRAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 790
Query: 732 IKRAAYVLE 740
+KRAA +L+
Sbjct: 791 VKRAADILK 799
>gi|290968595|ref|ZP_06560133.1| DNA mismatch repair protein MutS [Megasphaera genomosp. type_1 str.
28L]
gi|290781248|gb|EFD93838.1| DNA mismatch repair protein MutS [Megasphaera genomosp. type_1 str.
28L]
Length = 866
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 179/632 (28%), Positives = 297/632 (46%), Gaps = 69/632 (10%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
L LDA L+I + + G ++ +++ T MG RLLR W P+L
Sbjct: 268 LVLDAACLHHLEITRNVRDGGRKG--------TLLAVLDHTCTAMGGRLLRKWLETPLLS 319
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
+ R ++ + L + + L+ + D IL + + + + D+ A +S+
Sbjct: 320 GTQIMRRQEGVAELVQHSVLRKDVTDILEKIYDFERILTRIETGTV--SPKDYVALRESL 377
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
G+ +L++ L+ + I+ + + T VY+L+ I +
Sbjct: 378 ------------GVLPTLKQALQQVTSPILRDLIAAVHTH-DEVYDLLCRSIKEVPGQVI 424
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
G ++REGF ELDE+R+I EFL+E+ + E + K + Y +I +
Sbjct: 425 RNGGVIREGFSSELDEIRRIGANSKEFLQELEAKERERTGIKMKIGYTKVFGYYFEISHA 484
Query: 413 MC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ E + TL ++ E Y TP +E + + ++L +E
Sbjct: 485 NTKPVPEYYIRKQTL------------VNAER----YITPALKEFEVKVLTAQERMLALE 528
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
A+ ++ I + + A+LDC SLA+ A +N Y+RP L E + I +GR
Sbjct: 529 YALYGEVRQRIQTHIHDMQETARALAQLDCLHSLAVAAQENRYIRPQLNGERQIRIVDGR 588
Query: 531 HVLQEMTVDT--FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E V F+PND +++D I IITGPN +GKS Y++QVA++V ++ IGSF+PA
Sbjct: 589 HPIMEHYVKNALFVPNDVVLNHDTHEILIITGPNMAGKSTYMRQVAVLVLMTQIGSFIPA 648
Query: 588 DAAT----------VGLTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
A+ +G TD + QS+FM+++ +V +L+ AT SL +LDE G+GT
Sbjct: 649 REASICPVDRIFTRIGATDD--ILTGQSTFMMEMEEVSHILQYATQNSLLILDEIGRGTS 706
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + I Y + V L TH EL + + S+++K YT++V
Sbjct: 707 TFDGMSIARAVIEYCLK-KVHALTLFATHYHELTDMSTM--SKKIKNYTVAV------KE 757
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI FL R++PG A SYGLH A LAG+P ++KRA +L+ + +H +S
Sbjct: 758 RGRDITFLRRIIPGGADRSYGLHVARLAGLPEGLLKRAEVILQELETAEH----RPCQVS 813
Query: 758 AQDQQYKNAVEKMLAFDVLKGDLRLFFQDLLP 789
+++ E + A VL L + L P
Sbjct: 814 PSEKRDTVGAEGLFANPVLTRLLEVDINGLTP 845
>gi|374581420|ref|ZP_09654514.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
gi|374417502|gb|EHQ89937.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
Length = 850
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 276/559 (49%), Gaps = 60/559 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G K+G ++ +++ T G RLL++W +P+L + + RLN++ + L L
Sbjct: 268 GAGKKG-TLLSVLDLTQTAFGGRLLKHWIDKPLLRQDEIEGRLNSVEELVSDSFLRKDLQ 326
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ L V D+ ++ K + + A D + +++ L + +F+ +ESL+ +RL
Sbjct: 327 KLLSEVYDLERLMGKVSYGT--ANAKDLLSLTQTLALLPEIRTLFDSSSAESLK--VRLP 382
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
+ D E + + + L + N G +++ G+ E+DELR I
Sbjct: 383 DLDGFEPFVTKLQSAL-----------NSNPPLSLKEGNIIKTGYSQEVDELRLISAGGK 431
Query: 378 EFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLM-CIFEEKLDDTTLEQLQGF 431
E+L ++ + E + L ++F I H +L+ ++ K + E+
Sbjct: 432 EWLAQLENSERERTGIRSLKIGYNKVFGYYIEITHANAHLIPSDYQRKQTLSNAER---- 487
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
+ TP+ +E + + K+ D+E + L + + +++A
Sbjct: 488 ---------------FITPELKEYELKIIGAEEKLKDLEYELILALREEVRRNTKRIIRA 532
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEM-TVDTFIPNDTRID 549
AE+D F+SLA A +N+Y+RP L + + I GRH V++EM F+PNDT +
Sbjct: 533 AQVLAEIDVFVSLAEAAVRNHYVRPQLKKDGQIIIIEGRHPVVEEMLEQGAFVPNDTHMS 592
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
+ +ITGPN +GKS Y++QVALIV ++H+GSFVPA+ A++ L D S +
Sbjct: 593 GSQHLALITGPNMAGKSTYMRQVALIVLMAHMGSFVPANKASIALVDRIFTRVGASDDLA 652
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPK 660
A QS+FM+++ +V +L A+ SL +LDE G+GT T DG+ + + V PK
Sbjct: 653 AGQSTFMVEMQEVAHILNYASKNSLIILDEIGRGTATYDGLSIAWAVAEHLVQDPQFNPK 712
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH EL + E + + V E EDIVFL++++PG A SYG+
Sbjct: 713 TLFATHYHELTQL----QDEFPGLFNLHVGVKERG----EDIVFLHKILPGRADRSYGIQ 764
Query: 721 CALLAGVPAEVIKRAAYVL 739
A LAG+P ++I+RA +L
Sbjct: 765 VARLAGLPHDLIQRAKTLL 783
>gi|403386461|ref|ZP_10928518.1| DNA mismatch repair protein MutS [Clostridium sp. JC122]
Length = 890
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 295/592 (49%), Gaps = 57/592 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID + ++N +L +D ++ L+I ++ + + G S+ +++K T MG R
Sbjct: 247 IDIIESYNINDYLVIDGSSRRNLEITESLRDKNKKG--------SLLWVLDKTSTAMGGR 298
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LRNW +P++D E + R +AI + + L + LK V DI ++ K +S S
Sbjct: 299 RLRNWVDQPLVDKEKIVLRQDAIEELVKNISKEEDLKDALKEVYDIERLVGKISSKSI-- 356
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A + + SI + + ++ S L + L L+ +L +YE++
Sbjct: 357 NAKELISLKNSIEKIPTIKQVLTNFKSNLLLKVLNELD-------------DLKDIYEIL 403
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I N + G ++++GF + +D+ R +++ + S E + + + V
Sbjct: 404 DKSITDNPAISVKEGNIIKDGFDERIDDFRNSKRCGKQWIANLESTEKEETG--IRSLKV 461
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + I + L + + +R + TP+ +E++ +
Sbjct: 462 G---YNKVFGYYIEITK-----ANLALVPEGRYIRKQTLSNAER--FITPELKEMEEKIL 511
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K++ +E I D+ + D + + +ELDC SLA VA +N Y++P +
Sbjct: 512 GAEDKLMSLEYEIFVDIRDMVENHVDRMKISSKLISELDCLCSLARVARENGYIKPNINT 571
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +L I++GRH + E + V+ F+ NDT++D + ++ +ITGPN +GKS Y++QVALI
Sbjct: 572 KGILKIEDGRHPVVEKMLDVNEFVANDTKLDTKNNQLLLITGPNMAGKSTYMRQVALITL 631
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVPA A + + D S + +S+FM+++ +V +LR AT++SL LL
Sbjct: 632 MAQIGSFVPAKFADISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILRNATNKSLILL 691
Query: 630 DEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + I Y ++ K L TH EL EG + E ++ Y++
Sbjct: 692 DEVGRGTSTYDGLSIAWSVIEYICKNSNMKCKTLFATHYHELTKLEGMV---EGVRNYSI 748
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+V +N+ I+FL +++ G A SYG+ A LAG+P VI RA +L
Sbjct: 749 AVKEIDNS------IIFLRKIIEGGADESYGIEVAKLAGIPEIVIDRAREIL 794
>gi|423300940|ref|ZP_17278964.1| DNA mismatch repair protein mutS [Bacteroides finegoldii
CL09T03C10]
gi|408472275|gb|EKJ90803.1| DNA mismatch repair protein mutS [Bacteroides finegoldii
CL09T03C10]
Length = 872
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 172/608 (28%), Positives = 295/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLSRIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + ++ RLN + +F + A + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDKKPIDERLNVVEYFFRQPDFKAVIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + ++G EQL L C+T
Sbjct: 364 REVVQLKVALQAIEPIKLACIQADNASLNQIG------EQLNL-----------CVT--- 403
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQL 391
+ + + I + G ++++G +LDELR+I ++L ++ E L +
Sbjct: 404 --IRDRIAKEIKNDPPLAVNKGGVIQDGVNADLDELRRISYSGKDYLLQIQQRESELTGI 461
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ ++ Y T +
Sbjct: 462 PSLK-------VAYNNVFGYYIEVRNVHKDKVPAEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILVLETRLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
+Y+RPI+ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 HYIRPIIEDSDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFNRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|335049302|ref|ZP_08542301.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 199-6]
gi|333763439|gb|EGL40888.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 199-6]
Length = 754
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 179/632 (28%), Positives = 297/632 (46%), Gaps = 69/632 (10%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
L LDA L+I + + G ++ +++ T MG RLLR W P+L
Sbjct: 156 LVLDAACLHHLEITRNVRDGGRKG--------TLLAVLDHTCTAMGGRLLRKWLETPLLS 207
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
+ R ++ + L + + L+ + D IL + + + + D+ A +S+
Sbjct: 208 GTQIMRRQEGVAELVQHSVLRKDVTDILEKIYDFERILTRIETGTV--SPKDYVALRESL 265
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
G+ +L++ L+ + I+ + + T VY+L+ I +
Sbjct: 266 ------------GVLPTLKQALQQVTSPILRDLIAAVHTH-DEVYDLLCRSIKEVPGQVI 312
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
G ++REGF ELDE+R+I EFL+E+ + E + K + Y +I +
Sbjct: 313 RNGGVIREGFSSELDEIRRIGANSKEFLQELEAKERERTGIKMKIGYTKVFGYYFEISHA 372
Query: 413 MC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ E + TL ++ E Y TP +E + + ++L +E
Sbjct: 373 NTKPVPEYYIRKQTL------------VNAER----YITPALKEFEVKVLTAQERMLALE 416
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
A+ ++ I + + A+LDC SLA+ A +N Y+RP L E + I +GR
Sbjct: 417 YALYGEVRQRIQTHIHDMQETARALAQLDCLHSLAVAAQENRYIRPQLNGERQIRIVDGR 476
Query: 531 HVLQEMTVDT--FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E V F+PND +++D I IITGPN +GKS Y++QVA++V ++ IGSF+PA
Sbjct: 477 HPIMEHYVKNALFVPNDVVLNHDTHEILIITGPNMAGKSTYMRQVAVLVLMTQIGSFIPA 536
Query: 588 DAAT----------VGLTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
A+ +G TD + QS+FM+++ +V +L+ AT SL +LDE G+GT
Sbjct: 537 REASICPVDRIFTRIGATDD--ILTGQSTFMMEMEEVSHILQYATQNSLLILDEIGRGTS 594
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + I Y + V L TH EL + + S+++K YT++V
Sbjct: 595 TFDGMSIARAVIEYCLK-KVHALTLFATHYHELTDMSTM--SKKIKNYTVAV------KE 645
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DI FL R++PG A SYGLH A LAG+P ++KRA +L+ + +H +S
Sbjct: 646 RGRDITFLRRIIPGGADRSYGLHVARLAGLPEGLLKRAEVILQELETAEH----RPCQVS 701
Query: 758 AQDQQYKNAVEKMLAFDVLKGDLRLFFQDLLP 789
+++ E + A VL L + L P
Sbjct: 702 PSEKRDTVGAEGLFANPVLTRLLEVDINGLTP 733
>gi|392300671|gb|EIW11762.1| Msh5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 901
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 291/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALNIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLTQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G +E +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSNEG-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY+ L L +VA L LP CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYDHLEGILLDVARETQLFLLNTLPQEDCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLDG--IPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
++ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 ENIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSRDIVERA 838
>gi|357421119|ref|YP_004928568.1| putative DNA mismatch repair protein MutS [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
gi|354803629|gb|AER40743.1| putative DNA mismatch repair protein MutS [Blattabacterium sp.
(Mastotermes darwiniensis) str. MADAR]
Length = 850
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 271/553 (49%), Gaps = 49/553 (8%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
K+G S+ +++K TPMG RLL++W P++D+ ++ R + + + L + L
Sbjct: 289 KQGVSLIDIIDKTNTPMGGRLLKHWIHFPLIDIIHIEKRHRIVEELFSNVSIRTFLQKEL 348
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K + DI I+ K + + + KS+ S++ + K F L Q + +
Sbjct: 349 KEIYDIERIISKMSIEKI--SPREVITLYKSLMSIVRIQKKF-------LSNQKSKIFLE 399
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
I C + + ++ I + G ++ +GF ELDE+R +Y E+L
Sbjct: 400 IGNSFQDC-----NIISKKIVNTIHQDPPHHIEKGNVIVKGFSKELDEIRHLYFSKKEYL 454
Query: 381 EEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
E++ S+E H K I Y + GY + K D ++ S+
Sbjct: 455 EQLCSIEQFNTGIHNLK------IGYNNIFGYFFEVRTSKKDKVPSHWIRKQTLTNSER- 507
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T K + + + + KIL +E+ I +L++ + + L + AELD
Sbjct: 508 -------YTTEKLKNYEAQILNAEQKILSIEKEIFHNLINQLLKYIKPLQENAKIIAELD 560
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPNDTRIDN-DGRIN 555
S ++ A +NNY++P + L I+ GRH + Q ++ ++IPND ++ + +I
Sbjct: 561 VLYSFSISALENNYVKPKVNHSFGLCIKKGRHPVIERQFLSTTSYIPNDIILNKLNQQIL 620
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN SGKS ++Q ALI+ ++HIGSFVPA A +GL D S +++ +S+F
Sbjct: 621 IITGPNMSGKSAILRQTALIILMAHIGSFVPAQYAEIGLIDKIFSRVGASDNISLGESTF 680
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++++ +L + +S +LDE G+GT T DGI + + + P L TH
Sbjct: 681 MVEMNETANILNNLSKRSFLILDEIGRGTSTYDGISIAWSIVEFLHKSHFQPLTLFATHY 740
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E LN+ +R+K Y + V + E+I+F+ +++ G + SYG+H A ++G+
Sbjct: 741 HE-LNKMSFS-FKRIKNYHVYVKEID------ENIIFMRKMIEGGSEHSYGIHVAKISGM 792
Query: 728 PAEVIKRAAYVLE 740
P VI RA +L+
Sbjct: 793 PIAVIHRAKEILK 805
>gi|375091619|ref|ZP_09737908.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
gi|374563141|gb|EHR34463.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
Length = 869
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 294/613 (47%), Gaps = 90/613 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID + + N F+K+DA+ + L+I H + + ++ +++ TPMG R
Sbjct: 259 IDELKYIENNNFVKIDASTRQNLEI--------HKNLYDNTKTNTLLNVLDNANTPMGSR 310
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+ +W P+LD +N RL + F + + +L + + + L + D+ IL K + +
Sbjct: 311 KINSWLEFPLLDKNKINERLECVDFLVQNTDLSSQISDILDEIYDLERILSKVSYQN--A 368
Query: 281 TASDWTAFLKSICS-------LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
D F SI LL+ N I E + L+ L+ D++EK+
Sbjct: 369 NGRDLLNFRNSISKLPLFKDLLLNTNNKHFSKIGERF-DALKDLH-DLIEKS-------- 418
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI----YEELPEFLEEVASLELV 389
+ +D N ++ G L++EG+ ELD+LR ++L E+ E + E
Sbjct: 419 ------IREDVDQNITE----GNLIKEGYNKELDDLRASSIIGNKKLIEY--EKSERERT 466
Query: 390 QLPHLCKEMFVPCIVYIHQIGY---LMCIFEEKLDDTTLEQ--LQGFEFAFSDMDGETKR 444
+P L + + +GY L + +K D + + L+ E +D
Sbjct: 467 GIPKL-------KVSFNKNVGYFIELTSSYRDKAPDNYIRRQTLKNSERFITD------- 512
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
+ E+ +++ ++ +D+E + ++ + S + ++ + A +D S
Sbjct: 513 ------ELNEIADMILSSSNETMDLEYQLFNEIRETVAHNSTRIKESTDIIATIDALNSF 566
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGR-INIITGPN 561
A VA +NNY RPI E + I GRH + E T+D FI NDT I + I IITGPN
Sbjct: 567 ARVALKNNYCRPIFNSENYISISKGRHPVVEQTMDENQFIANDTLIGRKNKTIQIITGPN 626
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS Y++QVALIV +S IGS+VPAD+ + ++D S ++ S+FM+++ +
Sbjct: 627 MAGKSTYMRQVALIVLMSQIGSYVPADSCDISISDAIFTRIGASDNLAKGDSTFMVEMKE 686
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN- 672
+ +++ AT S +LDE G+GT T DG + I Y ++ ++ K L TH EL +
Sbjct: 687 MSNIIKNATENSFVILDEVGRGTSTYDGYSIAKSIIEY-ISKNINCKTLFATHYHELTDL 745
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
E + E LK + + ++N IVFL ++V G SYG+ A L+G+P E++
Sbjct: 746 EDSMENVENLK---VEIYEEKDN------IVFLRKIVRGKTDRSYGIEVAKLSGLPDEIL 796
Query: 733 KRAAYVLEAAQNN 745
RA +L + N
Sbjct: 797 FRANVILSSLDKN 809
>gi|325661608|ref|ZP_08150232.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472135|gb|EGC75349.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
Length = 876
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 296/604 (49%), Gaps = 96/604 (15%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +++ LD+++ L++ +T + G S+ +++K T MG R+LR++
Sbjct: 256 ATGRYMLLDSSSRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARMLRSYIE 307
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D + RL A+ + E L V D+ ++ + S D +
Sbjct: 308 QPLIDRHEIEQRLEAVEELKDKAISREEIREYLSPVYDLERLISRVTYQSA--NPRDLIS 365
Query: 288 FLKSICSLLHVNKIFEVGISESLREQL-----------RLLNFDIVEKAASCITTELAYV 336
F S+ L H+ I + E L +Q+ +LLN I+E+ +
Sbjct: 366 FRNSLEMLPHIKYIL-TEMHEELLQQICEELDTLEDLYQLLNESIMEEPPLAM------- 417
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
KE G ++++G+ ++D LRQ E +L ++ E + +
Sbjct: 418 -------------KE---GGIIKDGYDADVDMLRQAKTEGKNWLAQLEEEEREKTG--IR 459
Query: 397 EMFVPCIVYIHQIGYLMCI---FEEKLDD--TTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ V Y GY + + ++E + D T + L E + TP+
Sbjct: 460 NLKVK---YNKVFGYYLEVTNAYKELVPDYYTRKQTLANAER-------------FITPR 503
Query: 452 TRELDNLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
+EL++ + K+ +E + RD ++ L KAV A++D F SLALVA
Sbjct: 504 LKELEDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAV---AKIDVFTSLALVA 560
Query: 509 HQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDND-GRINIITGPNYSGK 565
+NNY+RP + + L+DI+ GRH V+++MT D FI NDT +D+ R++IITGPN +GK
Sbjct: 561 ERNNYVRPKINEKGLIDIKGGRHPVVEKMTPDNMFIANDTLLDDKKNRVSIITGPNMAGK 620
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMM 617
S Y++Q ALIV ++ IGSFVPAD+A +G+ D S + + QS+FM+++ +V +
Sbjct: 621 STYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANI 680
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGC 675
LR ATS SL +LDE G+GT T DG+ + + + + K L TH EL EG
Sbjct: 681 LRNATSSSLLILDEIGRGTSTFDGLSIAWAVVEHISNKKLLGAKTLFATHYHELTELEG- 739
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
K + + Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA
Sbjct: 740 --KLDSVNNYCIAV------KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVIARA 791
Query: 736 AYVL 739
++
Sbjct: 792 KEIV 795
>gi|335047438|ref|ZP_08540459.1| putative DNA mismatch repair protein MutS [Parvimonas sp. oral
taxon 110 str. F0139]
gi|333761246|gb|EGL38801.1| putative DNA mismatch repair protein MutS [Parvimonas sp. oral
taxon 110 str. F0139]
Length = 561
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 273/551 (49%), Gaps = 61/551 (11%)
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG RLL W +P+L++E + R + + F+ + L L E L + DI I K +
Sbjct: 1 MGFRLLNKWLDQPLLEIEKIQRRQSLVEDFVSNSNLRNELEELLASISDIERINSKISFG 60
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D S+ ++ + ++F L+ + + + + Y+
Sbjct: 61 N--CNARDLIHLKNSLSAVPKIKRLF--------------LDSNTLFSNIALNIPDTEYI 104
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELR--QIYEELPEFLEEVASLELVQLPHL 394
Y L+ I + G L++ G+ DELD +R +I + EV + + +L
Sbjct: 105 YNLINSAILEDVGILLKEGNLIKIGYDDELDLIRNNKIVGKQKLIKYEVDQRNITGIKNL 164
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+++ + GY + + + + L F R Y T +
Sbjct: 165 R-------LIFNKKTGYFFEVTK------SYQNLVPEYFELKQTLTNANR--YKTNELLT 209
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
++N++ I++ E + + + I + L K + + +D SL++VA +NNY
Sbjct: 210 IENMIFGSESDIIEKEYELFISIRNTIKMNIKTLQKLSDIISFIDSIFSLSIVAFKNNYC 269
Query: 515 RPILTLEPLLDIQNGRHVLQEM---TVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIK 570
+P L LE ++DI+NGRH + E +++ FIPNDT I +D I IITGPN SGKS YI+
Sbjct: 270 KPTLNLEGIIDIKNGRHPVIESFLSSINEFIPNDTNIGQSDNLIQIITGPNMSGKSTYIR 329
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALIV L+ IGSFVPAD+A + + D S ++ +S+FM+++ +V +LR AT
Sbjct: 330 QIALIVILAQIGSFVPADSANISIVDKIFTRIGASDNLYKGESTFMVEMKEVNNILRYAT 389
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNE----GCLPK 678
SL +LDE G+GT T DG+ L + Y +T ++ K L TH EL++ C+
Sbjct: 390 KNSLLILDEVGRGTSTFDGLSLAWAILEY-ITKNIKSKTLFATHYHELIDLEHTFACIKN 448
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ V+ + N ++IVFL +++ G A SYG+ A LAG+P EVI R+ +
Sbjct: 449 KH------IQVIEDKEN----DEIVFLRKIMDGGANKSYGIAVAKLAGLPMEVINRSKII 498
Query: 739 LEAAQNNKHVE 749
L++ + NK +E
Sbjct: 499 LDSIE-NKEIE 508
>gi|392426160|ref|YP_006467154.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
gi|391356123|gb|AFM41822.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
Length = 850
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 270/573 (47%), Gaps = 72/573 (12%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
GR SV M T +G RLLR+W +P+L + RLN + L
Sbjct: 270 GRKGTLLSVLDMTQ---TALGGRLLRHWIDKPLLVEAEIEQRLNNVEELTSDSFSRQDLS 326
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ L V D+ ++ + + + A D + +++ L + ++ + + SL+ ++ LL
Sbjct: 327 KILAKVYDLERLMGRVSYGT--ANAKDLLSLAQTLALLPELREVLKASTAGSLKAKVPLL 384
Query: 318 NF--DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
+V K + I + D G +++ G+ E+DELR I
Sbjct: 385 EGLDPLVHKLLDALNPSPP------ISLRD---------GNIIKTGYSQEVDELRSIATG 429
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF--------EEKLDDTTLEQ 427
E+ VA LE + I Y GY + I E+ + TL
Sbjct: 430 GKEW---VAKLENAERERTGIRSL--KIGYTKVFGYYIEITHSNARLVPEDYIRKQTLSN 484
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
+ F TP+ +E + + ++ ++E + + L + ++
Sbjct: 485 AERFV----------------TPELKEYEQKILGAEERLKELEFELFQTLREEVRSYTQV 528
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPND 545
+L+A + AE+D ++SLA +A + Y RP +T + + I GRH + E + F+PND
Sbjct: 529 ILRAADSLAEIDVYVSLAEIAVRKRYTRPQITTDGQISITEGRHPVVEDMLEAGVFVPND 588
Query: 546 TRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------S 597
T++ D + +ITGPN +GKS Y++QVALIV ++HIGSFVPA A + L D S
Sbjct: 589 TQLSFDHHLAVITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKQAAISLVDRIFTRVGAS 648
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CD 656
+ A QS+FM+++H+V +L+ AT +SL +LDE G+GT T DG+ + Y V +
Sbjct: 649 DDLAAGQSTFMVEMHEVAHILKYATKKSLIILDEIGRGTATFDGLSIAWAVAEYLVQHPE 708
Query: 657 VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALL 715
PK L TH EL E P + + V E EDI+FL++++PG A
Sbjct: 709 FTPKTLFATHYHELTQLEDDFP-----GLFNLHVGVKERG----EDIIFLHKILPGRADR 759
Query: 716 SYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
SYG+ A LAG+P E+++RA +L + K V
Sbjct: 760 SYGIQVARLAGLPHELLQRAKTLLLELEATKSV 792
>gi|380692972|ref|ZP_09857831.1| DNA mismatch repair protein MutS [Bacteroides faecis MAJ27]
Length = 872
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 295/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKQACLEADNASLNRIG------EQLNLC-ISIRDRIAKEINNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--L 391
+ +N+ G ++++G +ELD+LR+I ++L ++ E Q +
Sbjct: 417 PLL---------INK------GGVIKDGVNEELDDLRRISYSGKDYLLQIQQRESEQTGI 461
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L + Y + GY + + D E ++ +R K
Sbjct: 462 PSLK-------VAYNNVFGYYIEVRNIHKDKVPQEWIRKQTLV------NAERYITQELK 508
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
E + +LG KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 509 VYE-EKILG-AEDKILVLETQLYTDLVQALTEFIPQIQINANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RPI+ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 NYIRPIIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA+ A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAERAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANA 797
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 798 ILKQLESD 805
>gi|383115628|ref|ZP_09936384.1| DNA mismatch repair protein mutS [Bacteroides sp. D2]
gi|382948312|gb|EFS31803.2| DNA mismatch repair protein mutS [Bacteroides sp. D2]
Length = 872
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 172/620 (27%), Positives = 299/620 (48%), Gaps = 79/620 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ +M G G S+ ++++ ++PMG R
Sbjct: 254 ITSLARIEEDKYVRLDKFTVRSLELI------GNMNDG----GSSLLNVIDRTISPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F E + E L + D+ I+ K SP
Sbjct: 304 LLKRWMVFPLKDEKPINERLNVVEYFFRQPEFKELIEEQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G EQL L I ++ A I +
Sbjct: 364 REVVQLKVALQAIEPIKEACLEADNASLNRIG------EQLNLC-IPIRDRIAKEINNDP 416
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELRQI ++L ++ E
Sbjct: 417 PLL---------INK------GGVIKDGVNADLDELRQISYSGKDYLLKIQQRE------ 455
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 456 -SESTGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 506
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + DLV + F + N A LDC LS A VA +N
Sbjct: 507 LKEYEEKILGAEDKILALETQLYTDLVQALTEFIPQIQVNANQIARLDCLLSFANVAREN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
Y+RP++ +LDI+ GRH + E + + +I ND +D+ +I IITGPN +GKS
Sbjct: 567 RYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPNMAGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + + + L TH E LNE + K
Sbjct: 687 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 744 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 797
Query: 738 VLEAAQNNKHVERWSHENIS 757
+L+ +++ + S + ++
Sbjct: 798 ILKQLESDNRQQGISRKPLT 817
>gi|451820042|ref|YP_007456243.1| DNA mismatch repair protein MutS [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786021|gb|AGF56989.1| DNA mismatch repair protein MutS [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 912
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 289/590 (48%), Gaps = 61/590 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + + G S+ +++K T MG R LR W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKNKKG--------SLLWVLDKSATAMGGRTLRKWIDEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ RLN ++ S L LK + DI I+ K ++ + A D + S
Sbjct: 310 IKTEIEKRLNGVNEAFSSVSFNEDLRIALKEIYDIERIVGKISNKNV--NAKDMLSLKSS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L V K+ E +S+ L+E L+ EL + +L+ I S
Sbjct: 368 LEKLPMVKKLLEDRLSDLLKEYHAELD-------------ELTDIKDLLDLSIKEEPSLS 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ E+DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 IKEGNIIKDGYNSEVDELRQSKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + I + D + + +R K E + +LG K++++E
Sbjct: 469 YYIEISKSNYD-----SIPEGRYVRKQTLSNAERYITEELKVME-EKILG-AEEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
A+ D+ +I L K+ + LD +LAL+A +N+Y++P + + ++DI +GR
Sbjct: 522 YALFSDIRDNIEKEISRLKKSARIISNLDGISTLALIALENDYIKPEINEDGIIDITDGR 581
Query: 531 HVLQEMTVD--TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ ND + +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 582 HPVVEKVIGRGEFVSNNTILNQNDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
A + + D S + +S+FM+++ +V +LR AT +SL LLDE G+GT T
Sbjct: 642 SKANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILRNATQKSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y D + K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITKNDKLRCKTLFATHYHELVKLEGILPG---VKNYSVAVKKMKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE--AAQNN 745
++FL ++V G A SYG+ A LAG+P VI RA +L+ +NN
Sbjct: 757 ----VIFLRKIVEGGADESYGIEVAKLAGLPEAVINRAKEILQNLEGENN 802
>gi|331084834|ref|ZP_08333922.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410928|gb|EGG90350.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 885
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 180/604 (29%), Positives = 296/604 (49%), Gaps = 96/604 (15%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +++ LD+++ L++ +T + G S+ +++K T MG R+LR++
Sbjct: 265 ATGRYMLLDSSSRRNLELCETLREKQKRG--------SLLWVLDKTKTAMGARMLRSYIE 316
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
+P++D + RL A+ + E L V D+ ++ + S D +
Sbjct: 317 QPLIDRHEIEQRLEAVEELKDKAISREEIREYLSPVYDLERLISRVTYQSA--NPRDLIS 374
Query: 288 FLKSICSLLHVNKIFEVGISESLREQL-----------RLLNFDIVEKAASCITTELAYV 336
F S+ L H+ I + E L +Q+ +LLN I+E+ +
Sbjct: 375 FRNSLEMLPHIKYIL-TEMHEELLQQICEELDTLEDLYQLLNESIMEEPPLAM------- 426
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
KE G ++++G+ ++D LRQ E +L ++ E + +
Sbjct: 427 -------------KE---GGIIKDGYDADVDMLRQAKTEGKNWLAQLEEEEREKTG--IR 468
Query: 397 EMFVPCIVYIHQIGYLMCI---FEEKLDD--TTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ V Y GY + + ++E + D T + L E + TP+
Sbjct: 469 NLKVK---YNKVFGYYLEVTNAYKELVPDYYTRKQTLANAER-------------FITPR 512
Query: 452 TRELDNLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
+EL++ + K+ +E + RD ++ L KAV A++D F SLALVA
Sbjct: 513 LKELEDTILGAEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAV---AKIDVFTSLALVA 569
Query: 509 HQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDND-GRINIITGPNYSGK 565
+NNY+RP + + L+DI+ GRH V+++MT D FI NDT +D+ R++IITGPN +GK
Sbjct: 570 ERNNYVRPKINEKGLIDIKGGRHPVVEKMTPDNMFIANDTLLDDKKNRVSIITGPNMAGK 629
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMM 617
S Y++Q ALIV ++ IGSFVPAD+A +G+ D S + + QS+FM+++ +V +
Sbjct: 630 STYMRQSALIVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANI 689
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGC 675
LR ATS SL +LDE G+GT T DG+ + + + + K L TH EL EG
Sbjct: 690 LRNATSSSLLILDEIGRGTSTFDGLSIAWAVVEHISNKKLLGAKTLFATHYHELTELEG- 748
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
K + + Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA
Sbjct: 749 --KLDSVNNYCIAV------KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVIARA 800
Query: 736 AYVL 739
++
Sbjct: 801 KEIV 804
>gi|291459239|ref|ZP_06598629.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418493|gb|EFE92212.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
Length = 900
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 290/582 (49%), Gaps = 60/582 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++F+ LD+ + L++ +T + G S+ ++++ T MG RLLR + +P
Sbjct: 265 SQFMILDSASQRNLELTETLREKKKRG--------SLLWVLDRTRTAMGARLLRRFLEQP 316
Query: 230 ILDLENLNSRLNAISFFLCSEEL-MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
++D+ + R +A+ LCS + L E L + D+ +L + + S D AF
Sbjct: 317 LIDVGEIRRRQDAVEE-LCSHYIEREELSEYLNTIYDLERLLGRISYQS--ANPRDLLAF 373
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+S+ L + + SE +RE I E+ EL+ +Y+L+ + +
Sbjct: 374 KQSLRLLPDIRQQISGFHSELIRE--------IYEE-----MDELSDLYQLIDEALVEDP 420
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G L+REG+ +E D R ++ E+L E+ S E + K + I Y
Sbjct: 421 PLSARDGGLIREGYHEEADHFRLARKKGKEWLAELESSEREKTG--IKSLR---IRYNRI 475
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY CI ++ ++ + + + G + Y T + EL N + K+
Sbjct: 476 FGY--CI---EVSNSFKNLVPDYFIRKQTLTGAER---YTTDRLEELQNEILGAEEKLNA 527
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I L I + K+ A LDC LSL+ VA + Y+RP + E + I+
Sbjct: 528 LEYGIFCQLRDRIAENIPRVQKSSREIALLDCMLSLSRVAAERGYVRPKINSEGRIRIRE 587
Query: 529 GRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH + E + F+ NDT +D + RI+IITGPN +GKS Y++QVALIV ++ IGSFV
Sbjct: 588 GRHPVVERLLREGMFVSNDTLLDKGEERISIITGPNMAGKSTYMRQVALIVLMASIGSFV 647
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA+ A + + D S + + QS+FM+++++V +LR A++ SL +LDE G+GT
Sbjct: 648 PAEEADIAVCDRIFTRVGASDDLASGQSTFMVEMNEVANILRNASADSLLILDEIGRGTS 707
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
T DG+ + + Y V K L TH EL EG LP + Y ++V S
Sbjct: 708 TFDGLSIAWAVVEYLSQM-VKAKTLFATHYHELTELEGRLPG---VNNYCVAV------S 757
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
EDI+FL +++PG A SYG+ A LAGVP+ VI+RA +
Sbjct: 758 KHDEDIIFLRKIIPGGADQSYGIDVAGLAGVPSPVIERAKEI 799
>gi|393785810|ref|ZP_10373956.1| DNA mismatch repair protein mutS [Bacteroides nordii CL02T12C05]
gi|392661429|gb|EIY55015.1| DNA mismatch repair protein mutS [Bacteroides nordii CL02T12C05]
Length = 862
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 180/637 (28%), Positives = 305/637 (47%), Gaps = 89/637 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L D + + G+ I S+ + +K++++D +L++ +
Sbjct: 225 ASGAILQYL------DMTQHTQIGH----ITSLARIEEDKYVRMDKFTVRSLELIGS--- 271
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
M G G S+ +++K ++PMG RLL+ W + P+ D + +N RLN + +F E
Sbjct: 272 ---MNDG----GSSLLNVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFREPE 324
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIYT---ASDWTAFLKSICSLLHVNKIFEV 304
+ E L + D+ I+ K SP + A +K C + +
Sbjct: 325 FKELIEEQLHLIGDLERIISKVAVGRVSPREVVQLKIALQAIEPIKEACLQADNASLNRI 384
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G EQL L I ++ + I + + +N+ G +++ G
Sbjct: 385 G------EQLNLC-ISIRDRISKEINNDPPLL---------INK------GGVIQSGVNT 422
Query: 365 ELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELDELRQI ++L ++ E Q +P L I Y GY + + D
Sbjct: 423 ELDELRQIAYSGKDYLLKIQQRESEQTGIPSLK-------IAYNSVFGYYIEVRNVHKDK 475
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
E ++ ++ Y T + +E + + KIL +E + +LV +
Sbjct: 476 VPQEWIRKQTLVNAER--------YITQELKEYEEKILGAEDKILVLETRLYTELVQALS 527
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---D 539
F + N A +DC L+ A VA +NNY+RP++ +LDI+ GRH + E + +
Sbjct: 528 EFIPAIQINANQVARIDCLLAFANVARENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGE 587
Query: 540 TFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+I ND +D+ + I IITGPN +GKS ++Q ALI L+ IGSFVPA++A +GL D
Sbjct: 588 KYIANDVMLDSTTQQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKI 647
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + +
Sbjct: 648 FTRVGASDNISVGESTFMVEMNEAADILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVE 707
Query: 651 YFVT-CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y + L TH E LNE + KS +R+K Y +SV +N ++FL +L
Sbjct: 708 YIHEHPKAKARTLFATHYHE-LNE--MEKSFKRIKNYNVSVKEVDNR------VIFLRKL 758
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
G + S+G+H A +AG+P ++KRA +L+ +++
Sbjct: 759 ERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESD 795
>gi|291519454|emb|CBK74675.1| DNA mismatch repair protein MutS [Butyrivibrio fibrisolvens 16/4]
Length = 814
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 293/587 (49%), Gaps = 58/587 (9%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K++ LD + L++ +T + G S+ +++K T MG R L+++ +P+
Sbjct: 210 KYMLLDNSTRRNLELTETMRDKQKRG--------SLLWVLDKTKTAMGARQLKSFVEQPL 261
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L ++ + R +AIS S L E L V D+ ++ K S D AF +
Sbjct: 262 LSVDEIIRRQDAISELNESLIDREELREYLSSVYDLERLITKITYQS--ANPRDLIAFKQ 319
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
SI G+ ++ L + +++ + I ++ +YEL+ ID
Sbjct: 320 SI------------GMLSPIKTLLASFHCHLLDDTNANID-DMKDLYELIDAAIDEEPPI 366
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
G +++ GF +E+D LR+ + ++L E+ + E + K + I + G
Sbjct: 367 SSRDGDIIKTGFNEEVDRLRRAKVDGKQWLAELEAKERDKTG--IKNL---KIKFNKVFG 421
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ + + D ++ A ++ Y+TP+ +EL++ + ++ +E
Sbjct: 422 FYLEVTNSYKDLVPDYYVRKQTLANAER--------YYTPELKELEDSILGAEDRLNTLE 473
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ + I D + A LD +SLA+VA +N+Y+RPI+ ++DI++GR
Sbjct: 474 YEYFKTVRDTIASNVDRIQITAKAIALLDAMISLAVVAEKNHYVRPIIDNRGIIDIKDGR 533
Query: 531 H--VLQEMTVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H V Q + D FI ND ++D D R I IITGPN +GKS Y++QVALIV ++ IGSFVPA
Sbjct: 534 HPVVEQMINADQFISNDCQLDLDSRTIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPA 593
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A +G+ D S ++ QS+FM+++++V +L AT++SL +LDE G+GT T
Sbjct: 594 SSAQIGVVDRIFTRVGASDDLSTGQSTFMVEMNEVANILHNATNKSLLILDEIGRGTSTY 653
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + + + + + K L TH EL EG + + + Y ++V
Sbjct: 654 DGLSIAWSVVEH-IAYKIGAKTLFATHYHELTELEGQI---KGVHNYCIAVQELG----- 704
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
EDI+FL +++PG A SYG+ A LAG+P EV+ RA ++ + N
Sbjct: 705 -EDIIFLRKIIPGGADQSYGIQVARLAGLPEEVLSRARTIVNSLNEN 750
>gi|423304374|ref|ZP_17282373.1| DNA mismatch repair protein mutS [Bacteroides uniformis CL03T00C23]
gi|423310512|ref|ZP_17288496.1| DNA mismatch repair protein mutS [Bacteroides uniformis CL03T12C37]
gi|392681683|gb|EIY75040.1| DNA mismatch repair protein mutS [Bacteroides uniformis CL03T12C37]
gi|392684703|gb|EIY78026.1| DNA mismatch repair protein mutS [Bacteroides uniformis CL03T00C23]
Length = 871
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 171/603 (28%), Positives = 291/603 (48%), Gaps = 79/603 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 VTSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K+ C + +G EQL + F I E+
Sbjct: 363 REVVALKVALQAIEPIKAACMDADNASLNHIG------EQLNICQF-----IRDRIDREI 411
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQL 391
L+I G +++ G ELDELR+I ++L ++ E L ++
Sbjct: 412 DNDPPLLIN-----------KGGVIKSGVSAELDELRRIAYSGKDYLLQIQQRESELTEI 460
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
P L I Y + GY + + D E ++ A ++ Y T +
Sbjct: 461 PSLK-------IGYNNVFGYYIEVRNTHKDKVPAEWIRKQTLANAER--------YITQE 505
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + +LV + F + N A LDC LS A A +N
Sbjct: 506 LKEYEEKILGAEDKILVLETQLYAELVQSLSEFIPAIQINANQIARLDCLLSFATAAREN 565
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSI 567
NY+RP++ + +L+I GRH + E + + +I ND +D+ + I IITGPN +GKS
Sbjct: 566 NYIRPVIADDDVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSQTQQIIIITGPNMAGKSA 625
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 626 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 685
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+ +SL L DE G+GT T DGI + + + + L TH E LNE + K
Sbjct: 686 NLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEK 742
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 743 SFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRAND 796
Query: 738 VLE 740
+L+
Sbjct: 797 ILK 799
>gi|50305947|ref|XP_452934.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642067|emb|CAH01785.1| KLLA0C16423p [Kluyveromyces lactis]
Length = 934
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 302/625 (48%), Gaps = 74/625 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFS-VFGMMNKCVTPMGR 219
++ V ++ L L LD AL IF+ + P H K G+S VF ++N + +G+
Sbjct: 263 VNIVRQLMLKDRLFLDDDTLAALHIFKPIQIPGHF-CEITKTGYSSVFDLLNHTTSELGK 321
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSPS 277
RLL++W P+ + + R I + + L L +LKY+ +I I+ + + +
Sbjct: 322 RLLKSWLASPLSNKILIEERQKVIRSLIDGKNAILFDDLSNSLKYMPNIFSIVNEMSKGA 381
Query: 278 FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
S W ++ + + + + S + RL N I +L
Sbjct: 382 V--KLSVWRKYISFCTKTVEIINLIHILYDSS--DNCRLFN---------TIKNDLDKSM 428
Query: 338 ELVI-----GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA-------- 384
L I ++D+ S + ++++ ELDE R Y EL L VA
Sbjct: 429 MLKILKKTESVLDLEGSLNQD-AIVIKDKVRIELDEARGTYFELEGVLNLVANEANNTLI 487
Query: 385 ----SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA---FSD 437
S E L + +Y+ Q+GYL+C+ D ++E + F+ A +++
Sbjct: 488 STLQSNEEKLFKKLNGRNALINAIYLPQLGYLLCV------DASIEDM--FDPAVLYWTE 539
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
+ E ++Y T+ +D GD++ I D+E I +L + + +L + AE
Sbjct: 540 IFREQNVIYYKNDDTKVMDEHYGDLHGIISDLELEILLELQNAVLNTKPAILLSGKCFAE 599
Query: 498 LDCFLSLALVAHQNNYMRPILT-LEPLLDIQNGRHVLQEMTVDTFIPNDTRI-----DND 551
L+ +S A A NY++P++ E +++I+NGRH L E VDT+IPND R+ DND
Sbjct: 600 LEVLVSFAKTAISQNYVQPVIEEKECVIEIENGRHPLYETLVDTYIPNDLRMLGGTFDND 659
Query: 552 ------GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTA 602
RI++ITG N SGKS+++ Q LIVFL+HIG FVPAD A +GL D ++ +T
Sbjct: 660 TWNNNFKRISVITGANASGKSVFLTQNGLIVFLAHIGCFVPADNARIGLVDKILTRVVTR 719
Query: 603 E-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
E QS+F ID +Q+ L AT +SL L+DEFGKGT DG+ + G I F
Sbjct: 720 ESVAKTQSTFEIDANQMSKCLSLATPRSLLLIDEFGKGTDVIDGLSMFGAIIKDFSRSSS 779
Query: 658 PPKVLVCTHLTELLNEGCLPKS-ERLKFYT----MSVLRPEN--NSTDVEDIVFLYRLVP 710
P+V+ TH E+ + L + FY + V+ EN N+ D E I FLY+L
Sbjct: 780 CPRVIASTHYNEVFSPNILTSEINGVVFYKTEILLQVMEKENKGNARD-EMITFLYKLST 838
Query: 711 GHALLSYGLHCALLAGVPAEVIKRA 735
G A S+G+ CA G+ +++RA
Sbjct: 839 GIATNSFGIFCAKNCGLRQSIVQRA 863
>gi|448434380|ref|ZP_21586190.1| DNA mismatch repair protein MutS [Halorubrum tebenquichense DSM
14210]
gi|445685296|gb|ELZ37651.1| DNA mismatch repair protein MutS [Halorubrum tebenquichense DSM
14210]
Length = 935
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 184/645 (28%), Positives = 293/645 (45%), Gaps = 83/645 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 234 LDSEIAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 282
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R ++F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 283 LEITET---------MRGDADGTLFDTVDHTVTAAGGRLLREWLTRPRRDRETLAARLDA 333
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D A L + +
Sbjct: 334 VEALSSAALARDRVREVLGDAYDLERLASRTTSGSAGARELLSVRDTLALLPDLADAIEG 393
Query: 299 NKIFEVGISESLREQLRLLNFDIVEK-AASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + FD V++ A+ + EL + + K K G L
Sbjct: 394 TPLADSPAA---------AVFDRVDRDGAAALRAELGEA-------LAEDPPKAKTGGGL 437
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++ G+ DELDEL + +E + +L+ +A E + L H+ + Y+ Q+G +
Sbjct: 438 LKRGYDDELDELIERHESVKSWLDGLAEREKRRHGLSHVTVDRNKTDGYYV-QVGKSVAD 496
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R L+ G++ +++ +
Sbjct: 497 QVPEHYREIKTLKNSKRF---VTDELAEKEREVLR------LEEARGELEYELFEA---- 543
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH +
Sbjct: 544 ---LRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTEERRLDVEAGRHPV 600
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T D F+PND R+D D I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VG
Sbjct: 601 VEGTTD-FVPNDLRLDPDREFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVG 659
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT SL +LDE G+GT T DGI +
Sbjct: 660 LVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIA 719
Query: 646 GGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y +V + L TH EL LP + + V E + ++ F
Sbjct: 720 WAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTF 769
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
L + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 770 LRTVRDGPTDRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 814
>gi|6320047|ref|NP_010127.1| MutS family protein MSH5 [Saccharomyces cerevisiae S288c]
gi|2497997|sp|Q12175.1|MSH5_YEAST RecName: Full=MutS protein homolog 5
gi|836681|gb|AAA67649.1| MSH5 [Saccharomyces cerevisiae]
gi|1321950|emb|CAA66337.1| MSH5 [Saccharomyces cerevisiae]
gi|1431243|emb|CAA98728.1| MSH5 [Saccharomyces cerevisiae]
gi|285810882|tpg|DAA11706.1| TPA: MutS family protein MSH5 [Saccharomyces cerevisiae S288c]
Length = 901
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 290/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALHIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLSQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G E+ +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSDEA-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY L L +VA L +P CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYNHLEGILLDVARETQIFLLNTMPQEDCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLD--GIPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
++ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 ENIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSRDIVERA 838
>gi|371776160|ref|ZP_09482482.1| DNA mismatch repair protein MutS [Anaerophaga sp. HS1]
Length = 872
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 294/604 (48%), Gaps = 66/604 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I + + K++ LD L+IF P + G G S+ +++K VTPMG R
Sbjct: 256 ISGISRIDEEKYVWLDRFTIRNLEIFS----PVNEG------GRSLTDIIDKTVTPMGSR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+L+ W P+ +L+ + R + + F +L + L V D+ ++ K +
Sbjct: 306 MLKRWVALPLKELKPILDRQSVVEHFFKDPQLKMDIEANLHPVGDLERLVSKVAAGRI-- 363
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ + ++ ++ + ++ +E L+ LN C T E+V
Sbjct: 364 SPREVMQLHNALRCIIPIRQLCMSANNEVLKRMGEQLN--------PCDTIRERIAKEIV 415
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEM 398
D S K G ++REG DELDE+R I +FL E+ E+ + +P L
Sbjct: 416 ---PDPPSSLNK--GNVIREGVSDELDEIRNIAFSGKDFLNELQKREIERTGIPSL---- 466
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + + GY + + D E ++ ++ Y T + +E ++
Sbjct: 467 ---KINFNNVFGYYIEVRNTHKDKVPPEWIRKQTLVNAER--------YITEELKEYESK 515
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ +IL +E I LV+ + + + N A LDC L A +A +++Y+RP++
Sbjct: 516 ILGAEERILVLETEIYNALVTALTEYIPAIQLNSNILARLDCLLGFAKLAAEHHYVRPVV 575
Query: 519 TLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVAL 574
+DI+ GRH + E + + ++PND +D++ ++ IITGPN +GKS ++Q AL
Sbjct: 576 HEGDEIDIRAGRHPVIETQLPAGEEYVPNDVYLDSETQQVMIITGPNMAGKSALLRQTAL 635
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IV L+ IGSFVPA++A+VGL D S +++ +S+FM+++++ +L + +SL
Sbjct: 636 IVLLAQIGSFVPAESASVGLVDKIFTRVGASDNISLGESTFMVEMNEASSILNNLSPRSL 695
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKF 684
L DE G+GT T DGI + + Y K L TH E LNE + KS R K
Sbjct: 696 VLFDELGRGTSTYDGISIAWSIVEYIHENARARAKTLFATHYHE-LNE--MEKSYSRCKN 752
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-EAAQ 743
Y +SV N ++FL +LV G + S+G+H A +AG+P V+KRA+ +L E +
Sbjct: 753 YNVSVKEVGNK------VIFLRKLVRGGSEHSFGIHVARMAGMPPSVVKRASEILAELEE 806
Query: 744 NNKH 747
NN+H
Sbjct: 807 NNRH 810
>gi|151941849|gb|EDN60205.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
gi|365766702|gb|EHN08197.1| Msh5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 901
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 290/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALNIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLTQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G +E +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSNEG-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY+ L L +VA L LP CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYDHLEGILLDVARETQLFLLNTLPQEDCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLDG--IPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYTEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
+ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 EHIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSRDIVERA 838
>gi|291522251|emb|CBK80544.1| DNA mismatch repair protein MutS [Coprococcus catus GD/7]
Length = 882
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 298/595 (50%), Gaps = 67/595 (11%)
Query: 160 TIDSVIEVSLNK---FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
T+D++ +++ + ++ +D+ + L++ +T + G S+ +++K T
Sbjct: 251 TLDNLTKITPYRSGGYMIIDSATNRNLELIETLREKQKKG--------SLLWVLDKTKTA 302
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG RL+RNW +P+++ + + +R +A+ + E L V D+ ++ + +
Sbjct: 303 MGARLMRNWIEQPLIEKKKITARQDAVEELYNDMITREEIREYLNAVYDLERLVTRISYR 362
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ D AF S+ + V ++ S L+E +++ C L +
Sbjct: 363 TA--NPRDLIAFKTSLGMIPPVKQLLSQAKSAELKE---------IDERMDC----LEDI 407
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
Y+L+ I G +++EG+ +++D+ R E +L E+ + E + K
Sbjct: 408 YDLIEKSIQDEPPIMIREGGMIKEGYNEDVDKFRLSRTEGKTWLAELEAREKEKTG--IK 465
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+ V Y GY + + + ++L ++ +R Y TP+ +EL+
Sbjct: 466 NLRVR---YNKVFGYYLEVT------NSYKELVPEDWTRKQTLANAER--YITPELKELE 514
Query: 457 NLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+++ K+ +E + RD + + KA+ A LD SLA VA N+Y
Sbjct: 515 DMILGAEDKLAALEYDLYCEVRDSIGEQVVRIQETAKAI---AHLDVLASLACVAQSNDY 571
Query: 514 MRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDNDG-RINIITGPNYSGKSIYIK 570
+RP + + ++DIQ GRH V+++M + FI NDT +DN RI+IITGPN +GKS Y++
Sbjct: 572 VRPSINTKGVIDIQGGRHPVVEKMNNNQMFIDNDTYLDNKNHRISIITGPNMAGKSTYMR 631
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q ALIV ++ IGSFVPA +A +G+ D S + + QS+FM+++ +V +LR AT
Sbjct: 632 QSALIVLMAQIGSFVPAKSANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 691
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSE 680
S+SL +LDE G+GT T DG+ + + + + K L TH EL EG L +
Sbjct: 692 SRSLLILDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGKL---D 748
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ Y ++V R + + DI+FL +++ G A SYG+ A LAGVP VI RA
Sbjct: 749 SVNNYCIAV-REQGD-----DIIFLRKIIRGGADKSYGIQVARLAGVPDSVIDRA 797
>gi|257439842|ref|ZP_05615597.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
A2-165]
gi|257197751|gb|EEU96035.1| DNA mismatch repair protein MutS [Faecalibacterium prausnitzii
A2-165]
Length = 871
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 307/656 (46%), Gaps = 108/656 (16%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ +VI + ++++L L++ +T + GR K G ++ +++K T MG+R
Sbjct: 258 LKTVISYNEAQYMQLSPVTRANLELTETLR-------GREKRG-TLLWVLDKTSTAMGKR 309
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSP 276
LLR W +P+L + +N RL+A+ + L E L Y+ D+ ++ + +P
Sbjct: 310 LLRTWIEQPLLSSDAINHRLDAVESLVNQTVQRGDLIEELHYIADLERMMTRTVYGSATP 369
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
IY + C L SLR+Q A SC EL+ +
Sbjct: 370 KEIYA-------MAQTCERL-----------PSLRQQ-----------AESCGCAELSEI 400
Query: 337 YELVIGIIDVNRSKEKGY-------------GTLVREGFCDELDELRQIYEELPEFLEEV 383
+ + D+ K+K Y G ++ +G+ E+DELR I + L ++
Sbjct: 401 VSRIDPLSDI---KDKIYAAVDPDAPSTLKDGGVIAKGYHPEVDELRSIRDNTKGVLAQL 457
Query: 384 ASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE 441
+ L +E +P I Y H GY F E + + + + + GE
Sbjct: 458 ET-------RLRQETGIPKLKIGYNHVFGY----FIEVSNSYKAQVPESYIRKQTLTTGE 506
Query: 442 TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCF 501
Y T + +EL+N + + +++ +E + +L+ I D + + N AELD
Sbjct: 507 R----YITQELKELENKILGAHERLIALEHRLFNELLESIGAQLDRIQRTANAVAELDVL 562
Query: 502 LSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRID-NDGRINIIT 558
+LA VA +NNY RP + L I GRH V Q + F+PNDT ++ + R IIT
Sbjct: 563 AALAQVAAENNYCRPAVDESDQLTIVEGRHPVVEQMLKGSLFVPNDTTLNCGEDRCLIIT 622
Query: 559 GPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMID 610
GPN +GKS Y++Q ALI ++ IGSFVPA VG+ D S ++A QS+FM++
Sbjct: 623 GPNMAGKSTYMRQNALIALMAQIGSFVPARECHVGVVDAIFTRIGASDDLSAGQSTFMVE 682
Query: 611 LHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC-----T 665
+ +V +L+ ATS+SL +LDE G+GT T DG+ + + + P K L C T
Sbjct: 683 MTEVAEILKNATSRSLVVLDEIGRGTSTFDGMSIARAVVEHISD---PAKGLGCKTLFAT 739
Query: 666 HLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
H EL + EG + +K Y ++V + EDI FL R+V G A SYG+ A L
Sbjct: 740 HYHELTDLEGTISG---VKNYNIAVKK------RGEDITFLRRIVRGPADDSYGIEVAKL 790
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAV-----EKMLAFDV 775
AG+P V +RA VL A + + + A + AV EK+ A DV
Sbjct: 791 AGLPGTVTRRAHEVLRALEATAPKNKVEQMDFDALQEYNSPAVPSEVLEKLDALDV 846
>gi|401679865|ref|ZP_10811789.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
gi|400218992|gb|EJO49863.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
Length = 873
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 280/553 (50%), Gaps = 59/553 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ ++++ +TPMG RLL+ W P+ D+ + R A++ + + L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDIPTIQRRQAAVAELISRNAERCEIQSYLDCIY 347
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE--VGISESLREQLRLLNFDIV 322
D I+ + + S + D+T+ +S+ L ++ + + G+S L +N I
Sbjct: 348 DFERIVGRIETGSV--SPRDFTSLRESLQVLPNIKTLLKEFSGLS------LTSINSRID 399
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE- 381
+ A +Y+L+ I + G ++R+G+ +ELDELR + +L+
Sbjct: 400 DHAD---------IYDLLSRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQK 450
Query: 382 -EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
E + E L K Y GY + + ++D ++ + F
Sbjct: 451 LEDKAREETGLKLKTK--------YNKVFGYFFEVSKAQVD-----KVPAY-FIRKQTTV 496
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
+R Y TP +E + + KI+ +E+ + +DL + I + + AELD
Sbjct: 497 NAER--YITPDLKEFEIKILSAKEKIVSLEQQLYQDLRNQIKGVIKKVQETARALAELDV 554
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINII 557
SLA VA+++NY+ P + + ++I++GRH + E + + F+PND ++ +D +I
Sbjct: 555 LASLATVAYESNYICPNIVMNGQINIRDGRHPVIEKFLKREVFVPNDVVLNHDDEEFMLI 614
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++QVA+++ ++ IGSF+PA AT+ D S ++ QS+FM+
Sbjct: 615 TGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDISTGQSTFMV 674
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++ +V +L ATS+SL +LDE G+GT T DG+ + + + + + K L TH E
Sbjct: 675 EMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHAKTLFATHYHE 733
Query: 670 LLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVP 728
L+ E P RLK YT++V +DI FL R++ G A SYG+H A LAG+P
Sbjct: 734 LIPLEEVYP---RLKNYTVAVKEKR------KDIAFLRRIIRGGADRSYGIHVAKLAGLP 784
Query: 729 AEVIKRAAYVLEA 741
A+V+KRA +LE+
Sbjct: 785 AQVLKRAEVILES 797
>gi|429759390|ref|ZP_19291889.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
gi|429179666|gb|EKY20905.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
Length = 873
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 275/554 (49%), Gaps = 61/554 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ ++++ +TPMG RLL+ W P+ D+ + R A++ + + L +
Sbjct: 288 TLLDVLDRTLTPMGARLLKQWLESPLTDISTIQRRQAAVAELISRNGERCEIQGYLDCIY 347
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D I+ + + S + D+T+ +S+ L + + + SL
Sbjct: 348 DFERIVGRIETGSV--SPRDFTSLRESLQVLPQIKNLLKEFSGLSL-------------- 391
Query: 325 AASCITTEL---AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
S I T + A +Y+L+ I + G ++R+G+ +ELDELR + +L+
Sbjct: 392 --SSINTRIDHHADIYDLLNRAIAEQPALTLKDGRVIRDGYNEELDELRSLATNSEVWLQ 449
Query: 382 --EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
E + E L K Y GY + + ++D F + ++
Sbjct: 450 KLEDKAREETGLKLKTK--------YNKVFGYFFEVSKSQIDKVPAY----FIRKQTTVN 497
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
E Y TP +E + + KI+ +E+ + +DL I + + AELD
Sbjct: 498 AER----YITPDLKEFEIKILSAKEKIVSLEQQLYQDLRDQIKGVIKKVQETARALAELD 553
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINI 556
SLA VA+++NY+ P + + ++I++GRH + E + + F+PND ++ +D +
Sbjct: 554 VLASLATVAYESNYICPNIVMNGQINIRDGRHPVIEKFLKREVFVPNDVVLNHDDEEFML 613
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN +GKS Y++QVA+++ ++ IGSF+PA AT+ D S ++ QS+FM
Sbjct: 614 ITGPNMAGKSTYMRQVAILMIMAQIGSFIPAREATISPVDRVFTRVGASDDISTGQSTFM 673
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++ +V +L ATS+SL +LDE G+GT T DG+ + + + + + K L TH
Sbjct: 674 VEMKEVAYILENATSKSLIILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHAKTLFATHYH 732
Query: 669 ELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL+ E P RLK YT++V +DI FL R++ G A SYG+H A LAG+
Sbjct: 733 ELIPLEDVYP---RLKNYTVAV------KEKGKDIAFLRRIIRGGADRSYGIHVAKLAGL 783
Query: 728 PAEVIKRAAYVLEA 741
PA+V+KRA +LE+
Sbjct: 784 PAQVLKRAEVILES 797
>gi|448482824|ref|ZP_21605595.1| DNA mismatch repair protein MutS [Halorubrum arcis JCM 13916]
gi|445821110|gb|EMA70906.1| DNA mismatch repair protein MutS [Halorubrum arcis JCM 13916]
Length = 931
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 296/645 (45%), Gaps = 83/645 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 225 LDSELAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 273
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 274 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDREALAARLDA 324
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D A L + +
Sbjct: 325 VEALASAALARDRVREVLGDAYDLERLAARTTSGSAGARELLSVRDTLALLPDLADAIGG 384
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + L D V++ A+ + ELA + + K K G L
Sbjct: 385 TALADSPAAAVL---------DRVDRERAAALREELAEA-------LAEDPPKAKTGGGL 428
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++ G+ +ELDEL + +EE+ +L+ +A E Q L H+ + YI Q+G +
Sbjct: 429 LKAGYDEELDELIERHEEVKSWLDGLAEREKRQHGLSHVTVDRNKTDGYYI-QVGKSVAD 487
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R + R G++ + + +
Sbjct: 488 QVPEHYREIKTLKNSKRF---VTDELAEKEREVLRLEEAR------GELEYDLFE----- 533
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH +
Sbjct: 534 --ELRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTTERRLDVEAGRHPV 591
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VG
Sbjct: 592 VEGTTD-FVPNDLRLDAERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVG 650
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 651 LVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIA 710
Query: 646 GGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y +V + L TH EL LP + + V E + ++ F
Sbjct: 711 WAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTF 760
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
L + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 761 LRTVRDGPTNRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 805
>gi|420147621|ref|ZP_14654896.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
gi|398400768|gb|EJN54299.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
Length = 857
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 278/589 (47%), Gaps = 71/589 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-----NSPSFIYTASDW 285
L + + R + L + ++LK V D+ + + N+ + A
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSL 363
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A + SLL N L NF A I L +++L++ I
Sbjct: 364 GAIPDILNSLLETNNP-------------HLQNF------AKQIDP-LKGIHDLIVNTIV 403
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCI 403
N G L+REG D+LD R ++L E+ S E+ + +L +
Sbjct: 404 DNPPLLTTEGGLIREGVSDQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------V 456
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + D ++ ++ T Y TP +E ++L+ +
Sbjct: 457 GYNKVFGYYIEVTNSNKDKVPTDR-------YTRKQTLTNAERYITPDLKEHESLILEAE 509
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K +E + L ++ + L K A LD + A V+ QNNY+RP ++
Sbjct: 510 AKSTGLEYDLFVKLRENVKKYIPALQKLAKQVASLDVLTNFATVSEQNNYVRPDFKVDKQ 569
Query: 524 -LDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+++ NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++
Sbjct: 570 EINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTDIFLITGPNMSGKSTYMRQMALIAIMAQ 629
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE
Sbjct: 630 IGCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEI 689
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLR 691
G+GT T DG+ L G + Y + V K L TH EL + + LK + V
Sbjct: 690 GRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTD-----LDQTLKHLKNIHVGA 743
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
E N ++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 744 TEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|448597191|ref|ZP_21654329.1| DNA mismatch repair protein MutS [Haloferax alexandrinus JCM 10717]
gi|445741072|gb|ELZ92577.1| DNA mismatch repair protein MutS [Haloferax alexandrinus JCM 10717]
Length = 924
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 210/774 (27%), Positives = 352/774 (45%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P++ +
Sbjct: 117 QFLAAVVTDGDGVGLAFSDITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPEL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFSTEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L R +A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRHDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASELLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + +++ + ++E + R AA+ + T+L + + K
Sbjct: 372 LADAIEGSELADSPLAEVVSRPDR--------DAAADLRTDLDDA-------LAEDPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L R G+ DELD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFRTGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRF---------VTEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + DL + ++ L AE+D SLA A N + RP LT +L
Sbjct: 524 ELFE-------DLRERVARHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTEAGVL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND R+D++ I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLRMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|1582703|prf||2119252A MSH5 gene
Length = 901
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 290/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALHIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLSQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G E+ +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSDEA-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY L L +VA L +P CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYNHLEGILLDVARETQIFLLNTMPQEDCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLDG--IPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
++ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 ENIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSPDIVERA 838
>gi|399577954|ref|ZP_10771706.1| DNA mismatch repair protein mut [Halogranum salarium B-1]
gi|399237396|gb|EJN58328.1| DNA mismatch repair protein mut [Halogranum salarium B-1]
Length = 899
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 300/629 (47%), Gaps = 66/629 (10%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
+ ++ ++ A GGLLA E + D L+ + V + L+LD+TA +L
Sbjct: 231 VANDAELSACGGLLAYAEYTQGGDRLDY---------VSRVTRYDPRESLRLDSTALRSL 281
Query: 184 QIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI 243
++F+T A G ++ ++++ +GRR L W RP++D E + +R +A+
Sbjct: 282 ELFETRG---------ASSGHALVDVLDETSCALGRRELTGWLRRPLVDRERIEARHDAV 332
Query: 244 SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
+ F + ++ E L V D+ ++ + + A D L+S+ + L V +
Sbjct: 333 AEFAEHALVREAVRELLTDVYDVERLIARVSRGR--ANARD----LRSLKTTLDVVPEVK 386
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
+++ +LR L+ + ELA V +L+ I + E G +VREGF
Sbjct: 387 SELADVECAKLRDLHGTL---------DELADVRDLIDRAIATDPPIEITEGGVVREGFD 437
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT 423
DELD+LR E E+ VA LE + + +H GY + + LD
Sbjct: 438 DELDDLRATEREGREW---VADLEASEKERTGIDSLDVGHNQVH--GYYIEVTNPNLDKV 492
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
+ + S+ ++TP+ ++ ++ + + +E + ++ S I
Sbjct: 493 PDDYQRRQTLKNSER--------FYTPELKQREDEIFGAAERADKLEYELFTEVRSTIAA 544
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL--TLEPLLDIQNGRHVLQEMTVDTF 541
S+ + AELD +LA VA N+Y+RP E +DI GRH + E T F
Sbjct: 545 ESERVQALAAALAELDVLATLAAVAVDNDYVRPEFHEEGERGIDIDGGRHPVVERTQSNF 604
Query: 542 IPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
+PNDTR+ +DG I IITGPN SGKS Y++QVAL+V L+ +GSFVPAD+A + L D
Sbjct: 605 VPNDTRLGGDDGSIAIITGPNMSGKSTYMRQVALVVVLAQMGSFVPADSAHLPLVDRVFT 664
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S + QS+FM ++ ++ +L AT SL LLDE G+GT T DG + T F
Sbjct: 665 RVGASDDIAGGQSTFMREMAELTDILHGATEDSLVLLDEVGRGTSTADGQAIARATTE-F 723
Query: 653 VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
V +V L TH EL ER + + +D+ FL+R+ G
Sbjct: 724 VDDEVGAYTLFATHYHEL----TAVADERDGVFNLHFTATRTG----DDVTFLHRVERGA 775
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+ SYG+ A +AGVP V+ R+ +++A
Sbjct: 776 SSSSYGVEVARMAGVPERVVTRSQELVDA 804
>gi|110667421|ref|YP_657232.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi DSM 16790]
gi|109625168|emb|CAJ51588.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi DSM 16790]
Length = 931
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 210/753 (27%), Positives = 347/753 (46%), Gaps = 101/753 (13%)
Query: 57 STKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
+ ++ + F+ L+ DGT TV +++ F+ +A H L T D L+I+
Sbjct: 176 TVRNADEFIRRLR--DGTD--ATVSSFETAAFALGRARHILSEQFGTTAIDSLNIE---- 227
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
++V ++A+G +L ++ E A+IT + + + L LD
Sbjct: 228 ---------TDVAIQAAGAILTYID--------ETDTGVRAAIT--RLQPLDSDTHLALD 268
Query: 177 ATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
T L++ +T H G G ++ G ++ T G R LR W +RP + +
Sbjct: 269 TTTRRNLELTET-MHGDRGGDG------TLLGTIDHTATSAGHRQLREWIMRPQREQTEI 321
Query: 237 NSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
RL+ I + + + ETL D+ + + I +D T L+ I L
Sbjct: 322 TRRLDCIEALVDAPLARERIAETLNGSYDLERLAARC-----ISERADATDLLR-IRETL 375
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY--ELVIGIIDVNRSKEKGY 354
+ + I+ES+ + L+ + + T + V EL ++D K
Sbjct: 376 EILPTLDEVITESILSESPLM------QVVTRPTEDTVKVVRDELTAALVD-EPPKTIRD 428
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELV--QLPHLCKEMFVPCIVYIHQIGYL 412
G L + G+ ELD LR+ +E E+++++A E L HL + YI Q+G
Sbjct: 429 GGLFQYGYDAELDSLRERHETAQEWMDKLAQRETETHNLNHLSVDRNKTDGHYI-QVGKS 487
Query: 413 MC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ + E + TL+ + F+ +D E +R ++R +ME
Sbjct: 488 VADQVPEHYREIKTLKNSKRFK---TDELAERERDILRLEESRG-------------EME 531
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ +L I ++ L AE+D SLA A +N++ RP L + +DI+ GR
Sbjct: 532 YELFCELREQIADYAAMLQTVGQVIAEIDALHSLATHAVENDWTRPTLRADHTVDIEAGR 591
Query: 531 HVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
H + E T + F+PND +++++ ++TGPN SGKS Y++QVALI L+H GSFVPA AA
Sbjct: 592 HPVVEQTTE-FVPNDLQLEDERNFLLVTGPNMSGKSTYLRQVALITLLAHAGSFVPAAAA 650
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
T+G D + +S+FM+++ ++ +L A+S+SL +LDE G+GT T DGI
Sbjct: 651 TIGAVDGIYTRVGALDELAQGRSTFMVEMQELSKILHSASSESLVILDEVGRGTATYDGI 710
Query: 643 GLLGGTINYFVTCD--VP-PKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLRPENNSTD 698
+ Y P P+VL TH EL ++R+ + V E N
Sbjct: 711 SIAWAATEYLSAAQSTAPSPRVLFATHYHELTT-----LADRIAGVSNVHVAAEERNG-- 763
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK--HVERWSHENI 756
D+ FL + G A SYG+H A LAGVP V+ RA VL + ++ VE +H +
Sbjct: 764 --DVTFLRTVESGPADRSYGIHVAELAGVPDPVLTRARDVLSTLRADEAIEVETQNHADT 821
Query: 757 SAQDQQY------KNA-VEKMLAFDVLKGDLRL 782
S +DQ+ K+A + + FDV GD+R+
Sbjct: 822 SKRDQEENMTGGDKSAETTQQVVFDVNSGDIRV 854
>gi|329956370|ref|ZP_08296967.1| DNA mismatch repair protein MutS [Bacteroides clarus YIT 12056]
gi|328524267|gb|EGF51337.1| DNA mismatch repair protein MutS [Bacteroides clarus YIT 12056]
Length = 862
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 295/609 (48%), Gaps = 91/609 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 244 ITSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 293
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 294 LLKRWMVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 353
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K C SL H+ ++ I ++R++
Sbjct: 354 REVVALKVALQAIEPIKEACMDADNASLNHIGG--QLDICRAIRDR-------------- 397
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELRQI ++L +V E
Sbjct: 398 -IDKEINNDPPLLIN-----------KGGVIKSGVNAELDELRQIAYSGKDYLLKVQQRE 445
Query: 388 LVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
Q +P L I Y + GY + + D E ++ ++
Sbjct: 446 SEQTGIPSLK-------IGYNNVFGYYIEVRNVHKDKVPQEWIRKQTLVNAER------- 491
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 492 -YITQELKEYEEKILGAEDKILVLETQLYTELVQSLNEFISAIQIDANQIARLDCLLSFA 550
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPN 561
A +NNY+RP+++ + +L+I+ GRH + E + + +I ND +D+ +I IITGPN
Sbjct: 551 TAARENNYIRPVISDDEVLEIRQGRHPVIEKQLPIGEKYIANDVMLDSSTQQIIIITGPN 610
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI ++ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 611 MAGKSALLRQTALITLMAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 670
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L +S+SL L DE G+GT T DGI + + Y + L TH E LN
Sbjct: 671 AADILNNLSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPRAKARTLFATHYHE-LN 729
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P +
Sbjct: 730 E--MEKSFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSI 781
Query: 732 IKRAAYVLE 740
+KRA +L+
Sbjct: 782 VKRADDILK 790
>gi|147669669|ref|YP_001214487.1| DNA mismatch repair protein MutS [Dehalococcoides sp. BAV1]
gi|189030713|sp|A5FQC0.1|MUTS_DEHSB RecName: Full=DNA mismatch repair protein MutS
gi|146270617|gb|ABQ17609.1| DNA mismatch repair protein MutS [Dehalococcoides sp. BAV1]
Length = 858
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 183/639 (28%), Positives = 311/639 (48%), Gaps = 90/639 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G LL LE E +L+Q E + T D ++++D+ L+IF++
Sbjct: 227 ISAAGALLNYLE-ETQKSSLKQLERLSVYTTAD---------YMQMDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L ++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGILDQTRTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV----- 304
SL ++L + D+ + + + + + + S+ ++ +++ F +
Sbjct: 329 SLARTSLAKSLGQIADMERMANRIRQKTIL--PRELISLKNSLETVSAIHRQFGLMPPPR 386
Query: 305 ------GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
G+ + L E L ++N I + S + G G ++
Sbjct: 387 LAYFLNGL-KPLPEMLDIINKTITDDPPSTL-----------------------GDGKVI 422
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
R GF E+D+L + + FL ++ + E + K + + Y GY + I
Sbjct: 423 RAGFDPEMDKLCSLAGDARTFLSQMETRERERTG--IKSL---KLGYNRVFGYYIEISNA 477
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
L D E ++ ++ + TP+ +E +NL+ + ++L+ME + ++
Sbjct: 478 NLGDMPPEFIRKQTLVNAER--------FITPELKEYENLILNAKERLLEMETGLYEQVL 529
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEM 536
+ + F LL A LD + A VA +N+Y+RP+ E LDI+ GRH V Q +
Sbjct: 530 NQLGGFYSALLANAAALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGL 589
Query: 537 TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+ ND + D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LT
Sbjct: 590 GYGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLT 649
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ +
Sbjct: 650 DRIFTRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQA 709
Query: 648 TINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + + K L TH EL+ LP R+K Y ++V S D ++VFL
Sbjct: 710 VVEYIHSQPSLTAKTLFATHYHELVELASYLP---RVKNYNIAV------SEDRGEVVFL 760
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+++VPG SYG+H A LAG+P VIKRA VL +N
Sbjct: 761 HKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTELEN 799
>gi|428779890|ref|YP_007171676.1| DNA mismatch repair protein MutS [Dactylococcopsis salina PCC 8305]
gi|428694169|gb|AFZ50319.1| DNA mismatch repair protein MutS [Dactylococcopsis salina PCC 8305]
Length = 869
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 199/767 (25%), Positives = 349/767 (45%), Gaps = 103/767 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFL 65
+ ++ G+ G++Y D S + + + N + +++++ ++ T+ S L
Sbjct: 151 SIVIAGNHWGLAYTDISTGEFYTTQ---SQNLESLALELLRLHPAEILLPTNAPDLGSML 207
Query: 66 SALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLI-YLRVTGMDDGLSIKERICYLNS 120
++SD E L + FS +A ++L+ Y RV ++ G+ C S
Sbjct: 208 RPGEKSDSIPDFLPENFCYTLRSQTQFSAGEARNQLLEYFRVRSLE-GMG-----C---S 258
Query: 121 MMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNA-SITIDSVIEVSLNKFLKLDATA 179
+ +G VRA+GGLL +E E+ A + + ++ +LN +L LD
Sbjct: 259 NLPLG----VRAAGGLLFYIE-----------ETQKAHQVPLQTLRTYTLNDYLILDPQT 303
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
L+I QT + ++ G S+ +++ T MG R LR W L+P+L+++ + +R
Sbjct: 304 RRNLEIIQTVRDGTYHG--------SLLWALDRTCTAMGGRALRRWLLQPLLEIKGITAR 355
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVN 299
+ I+ + L L + L+ + D+ + + + + A D S+ L +
Sbjct: 356 QDTIAELIQETNLRDELRQLLRQIYDLERLSGRAGAGT--ANARDLKGLAISLVRLQELA 413
Query: 300 KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
+ + G S LR A + ++L + + ++ I + + G G L+R
Sbjct: 414 TLAQKGNSPFLR-------------ALQSVPSDLEALGKKILDAIVESPPQHLGEGGLIR 460
Query: 360 EGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE 417
G ++LD++R+ +E+ ++L E + E + L + Y GY + I
Sbjct: 461 SGMDEQLDQMRETFEKDKQWLAHLETSERERTGISKLK-------VGYNKTFGYYLSIPR 513
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
K D ++ T Y T + +E + + + +E I DL
Sbjct: 514 SKADLAPEN--------YTRKQTLTNEERYITSELKERETRILTAKDDLNRLEYEIFADL 565
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
+ + + + A +D LA +A N+Y RP + L I+ GRH + E T
Sbjct: 566 RAEVGEKAQQIRDISRAVAAIDALAGLAELAVYNDYCRPEMVEGRCLSIKEGRHPVVEQT 625
Query: 538 VDT--FIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
+ T F+PN T + + + I+TGPN SGKS Y++QV LI ++ IGSFVPA AA
Sbjct: 626 LPTGFFVPNSTNMGYEEERDTPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFVPAQAA 685
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+G++D + QS+FM+++++ +L ATS SL LLDE G+GT T DG+
Sbjct: 686 KLGISDRVFTRVGAVDDLATGQSTFMVEMNETANILNHATSHSLILLDEIGRGTATFDGL 745
Query: 643 GLLGGTINYFVTCDVPPKVLVCTHLTELLNE--GCLPKSERLKFYTMSVLRPENNSTDVE 700
+ Y T ++ + + TH E LNE LP + Y ++V E +
Sbjct: 746 SIAWAVAEYLAT-EIKARTIFATHYHE-LNELASILPN---VANYQVTVKEME------Q 794
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+I+FL+++ PG A SYG+ LAG+P VI RA V+ Q KH
Sbjct: 795 EIIFLHQVQPGGADRSYGIEAGRLAGLPPSVISRAQQVM--GQIEKH 839
>gi|357043367|ref|ZP_09105062.1| DNA mismatch repair protein mutS [Prevotella histicola F0411]
gi|355368541|gb|EHG15958.1| DNA mismatch repair protein mutS [Prevotella histicola F0411]
Length = 886
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 171/623 (27%), Positives = 291/623 (46%), Gaps = 76/623 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ TPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGSSLLNVIDNTATPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D + +N RL+ + +F + ++ E + D+ I+ K SP
Sbjct: 318 LLRRWMVFPLKDAKPINERLDVVDYFFREPDFREAIDEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K+ C + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALKAIQPVKTACLYAKSEPLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
VN+ G ++ G+ ELDELR I + ++L E+ E+ Q
Sbjct: 434 ------------VNK------GDVIASGYNKELDELRSIRDNGKQYLLEIQEKEVEQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDRVPEDWIRKQTLAQAER--------YITPELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL ME + +L+ + F + N A LDC LS V+ Q++Y
Sbjct: 523 EYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQQHHY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + ++PND +D + +I +ITGPN +GKS +
Sbjct: 583 VRPVVDDSEVIDIKQGRHAVIETQLPIGEQYVPNDVLLDTEKQQIMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKS 679
T +SL L DE G+GT T DGI + + Y + L TH EL E P
Sbjct: 703 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRAQARTLFATHYHELNEMEKNFP-- 760
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV E I+FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 761 -RIKNYNVSVKEVEGK------IIFLRKLEQGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 -EAAQNNKHVERWSHENISAQDQ 761
E +N V + DQ
Sbjct: 814 KELEADNAQVGSVGKAAVDRLDQ 836
>gi|256273566|gb|EEU08499.1| Msh5p [Saccharomyces cerevisiae JAY291]
Length = 901
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 288/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALNIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLTQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G E +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSDEG-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY L L +VA L LP CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYNHLEGILLDVARETQIFLLNTLPQENCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLDG--IPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSRREQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
+ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 EHIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSRDIVERA 838
>gi|448427491|ref|ZP_21583806.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
gi|445678178|gb|ELZ30672.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
Length = 931
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 294/645 (45%), Gaps = 83/645 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 225 LDSELAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 273
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 274 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDREALAARLDA 324
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D A L + +
Sbjct: 325 VEALASAALARDRVREVLGDAYDLERLAARTTSGSAGARELLSVRDTLALLPDLADAIGG 384
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + L D V++ A+ + ELA + + K K G L
Sbjct: 385 TALADSPAAAVL---------DRVDRERAAALREELAEA-------LAEDPPKAKTGGGL 428
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++ G+ ELDEL + +EE+ +L+ +A E Q L H+ + YI Q+G +
Sbjct: 429 LKAGYDGELDELIERHEEVKSWLDGLAEREKRQHGLSHVTVDRNKTDGYYI-QVGKSVAD 487
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R + R G++ + + +
Sbjct: 488 QVPEHYREIKTLKNSKRF---VTDELAEKEREVLRLEEAR------GELEYDLFE----- 533
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH +
Sbjct: 534 --ELRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTTERRLDVEAGRHPV 591
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VG
Sbjct: 592 VEGTTD-FVPNDLRLDAERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVG 650
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT SL +LDE G+GT T DGI +
Sbjct: 651 LVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIA 710
Query: 646 GGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y +V + L TH EL LP + + V E + ++ F
Sbjct: 711 WAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTF 760
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
L + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 761 LRTVRDGPTNRSYGVHVADLAGVPGPVVSRADEVLDRLREEKAIE 805
>gi|254584246|ref|XP_002497691.1| ZYRO0F11330p [Zygosaccharomyces rouxii]
gi|238940584|emb|CAR28758.1| ZYRO0F11330p [Zygosaccharomyces rouxii]
Length = 847
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 284/609 (46%), Gaps = 81/609 (13%)
Query: 185 IFQTDKHPSHMGIGRAK----EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
+F + P +G+ K FSV+ ++ + ++ MG++ LR+W P+ + E + R
Sbjct: 197 LFSLNVLPQMQKMGQDKLVQNACFSVWELLGQDLSEMGKKKLRSWITGPLTNKEMIVKRY 256
Query: 241 NAISFFLCSEELMASLHETLKYV-KDIPHILKKFNS-PSFIYTASDWTAFLKSICSLLHV 298
+ I L ASL E L+ K +P+++ N T + W + L + L V
Sbjct: 257 DIIRTLL--NRTNASLFEELRTAAKRMPNVISTMNQLQEGKTTVNSWCSLLDFLTRSLQV 314
Query: 299 NKIFEVGISESLREQLRLLNFD-----IVEKAASCITTELAYVYELVIG-IIDVNRSKEK 352
++ + +L FD I + + +++ I +ID+ SKE
Sbjct: 315 YRL------------VSMLRFDRSNQNIFTRIQQTVNSKIVKRLSARINDVIDLETSKET 362
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFLEEVAS-LELVQLPHLCKEMF--------VPCI 403
+R+G LD R +Y L L VA E+ L L + +
Sbjct: 363 K-SIAIRDGVDSRLDHCRNVYNSLEAILCSVAKDAEITILNSLVGQGIDTDAIDESLVNA 421
Query: 404 VYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
VYI Q+GY++ + FE+ + + LQ E ++ + ++Y + ELDN G
Sbjct: 422 VYIPQLGYMVTLEIGFEQA--EWISQDLQWDEIFRTETN-----IYYKNYRVNELDNEFG 474
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
D++ I D+E I L +H+ + L + AEL+ LS A V+ NY+ P ++
Sbjct: 475 DVHTLIFDLEIDILHSLQNHVLEQREMLCFYRHLLAELEVLLSFAYVSESRNYVEPEISE 534
Query: 521 EP-LLDIQNGRHVLQEMTVDTFIPNDTRIDNDG----------------RINIITGPNYS 563
+ +L+++ GRH L E V+T+IPN + N G RI I+TG N S
Sbjct: 535 KSCILEVEEGRHALYETMVNTYIPNSISL-NGGPFHVSNPSAWFESGFERIAILTGANQS 593
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVG 615
GKS+++ Q LIV L+ IG FVPA A +G+ D + MT +QSSF +D Q+
Sbjct: 594 GKSVFLTQNGLIVLLAQIGCFVPAKRAKIGIVDKILTRIQTRETMTKDQSSFALDSLQMA 653
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
L AT +SL L+DEFGKGT DG L G I+ P+++ CTH EL G
Sbjct: 654 KCLSLATEKSLILVDEFGKGTDIADGPALFGSVISVSSKDQRCPRIIGCTHFHELFKNGI 713
Query: 676 LPKSE-RLKFYTMSVL----RPENNSTDVED----IVFLYRLVPGHALLSYGLHCALLAG 726
L + +K YT +L ++ + DV I FLY + G + S+G++CA + G
Sbjct: 714 LSEDVLGVKHYTTDILLLNQESQSQAIDVHKENFGITFLYSVQEGISRESFGIYCAKVCG 773
Query: 727 VPAEVIKRA 735
V ++ RA
Sbjct: 774 VDRPIVTRA 782
>gi|442804336|ref|YP_007372485.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740186|gb|AGC67875.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 870
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 175/644 (27%), Positives = 314/644 (48%), Gaps = 97/644 (15%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG L+ L+ + VD KE + + + ++ +D+++ L++ +T +
Sbjct: 235 ASGALIGYLKVTQKVDLNHIKE----------IQKYKIENYMIIDSSSRRNLELTETLRD 284
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
R K G ++ ++++ +T MG RLLR W +P+LD++ +N RL+A+
Sbjct: 285 -------RKKRG-TLLWVLDRTMTAMGGRLLRKWIEQPLLDVDEINRRLDAVEELKDKFM 336
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS---ICSLLHVNKIFEVGISE 308
+ + L E LK V D+ + K + A D A S I S+L + + +
Sbjct: 337 IRSELRELLKKVYDMERLASKLVVGNV--NARDLLALKASMGQIPSILDLMSDLKTELCV 394
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
+R+++ +N +YEL+ I + G ++R+G+ +++D
Sbjct: 395 GIRDEIDHMND----------------IYELIDKSIAEDPPVTIKDGGIIRDGYSEDVDT 438
Query: 369 LRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLE 426
R+ + E +++ E EL + +L + Y GY + + + L
Sbjct: 439 YRKAFTEGKQWIADLEAKERELTGIKNLK-------VRYNKVFGYYIEVTKANLSQVPDR 491
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
++ ++GE + T + ++L++ + K+ ++E + ++ I
Sbjct: 492 YIRKQTL----VNGER----FITEELKKLEDTILGAEEKVKNLEYELFCEIREKIAAEVH 543
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPN 544
+ + + A+LD SLA VA + NY++P++ +DI++GRH + E + + F+PN
Sbjct: 544 RIQRTADRLAQLDVLCSLAEVADRENYVKPVVHEGSEIDIKDGRHPVVEKVLGSSPFVPN 603
Query: 545 DTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D +++D R+ IITGPN +GKS Y++QVALIV ++ +GSFVPA AT+G+ D
Sbjct: 604 DAYLNDDTDRVIIITGPNMAGKSTYLRQVALIVLMAQMGSFVPASKATIGIVDRIFTRVG 663
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-T 654
S + + QS+FM+++ +V +L AT +SL +LDE G+GT T DG+ + I Y
Sbjct: 664 ASDDLASGQSTFMVEMTEVANILNNATPRSLLILDEIGRGTSTHDGLAIAWSVIEYINDK 723
Query: 655 CDVPPKVLVCTH---LTEL------LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ + L TH LTEL + C+ +R ++I+FL
Sbjct: 724 SRLGCRTLFATHYHELTELEDKLTGIKNCCIEVKKR-----------------GDEIIFL 766
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQNNK 746
+++PG A SYG+ A LAGVP VI+RA ++ L+AA NK
Sbjct: 767 RKIIPGGADQSYGIEVAGLAGVPELVIERAKHILNELDAADINK 810
>gi|407473973|ref|YP_006788373.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407050481|gb|AFS78526.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 900
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 175/598 (29%), Positives = 296/598 (49%), Gaps = 71/598 (11%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
SL ++ LD L++ +T + G++K+G S+ ++++ T MG RLL+ W
Sbjct: 269 SLESYMILDINTRRNLELTETIR-------GKSKKG-SLLSVLDRTSTSMGARLLKKWIE 320
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY---TASD 284
P++D E + RL+ + +F + LM + E LK V DI ++ + +Y D
Sbjct: 321 EPLIDKEKIEYRLDIVEYFTENIILMNDIKEILKNVYDIERLMGRI-----VYGNCNGRD 375
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+ SI + + I E S+ L + R D ++ I +LA V E I I
Sbjct: 376 LISLKSSISKVPELKSILETCDSKELIKLGR--EVDCLDDIHELI--DLAIVEEPPIAI- 430
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHLCKEMFVPC 402
KE G L++ + +EL L++ + E+L ++ E + +L
Sbjct: 431 -----KE---GNLIKPEYDEELSLLKEASIKGKEWLSKLEEKEKNNTGIKNLK------- 475
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I + GY + + + + +L F +R Y T + +E++ +
Sbjct: 476 IGFNRVFGYFIEVSKSNV------KLVPDYFIRKQTLANAER--YITDELKEMEEKILGS 527
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
K++++E I ++ I + +E+D SL+ A++N+Y RP +
Sbjct: 528 EEKMVELEYNIFLNIRDKIRANVIRIQNTSKIISEIDVMNSLSYSAYENDYKRPTINSNG 587
Query: 523 LLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLS 579
++DI+NGRH + E ++ ++F+PNDT +D +D R++IITGPN +GKS Y++QVALI ++
Sbjct: 588 VIDIRNGRHPVVEKVLSNESFVPNDTLLDCDDNRLSIITGPNMAGKSTYMRQVALITLMT 647
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
+GSFVPAD A + + D S ++ QS+FM+++ +V +L T SL +LDE
Sbjct: 648 QLGSFVPADEANISIVDRIFTRIGASDDLSQGQSTFMVEMSEVANILNNGTKNSLIILDE 707
Query: 632 FGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTM 687
G+GT T DG+ + Y + K L TH LTEL + K +K Y +
Sbjct: 708 IGRGTSTYDGLSIAWAVSEYISDKSKMGSKTLFATHYHELTELED-----KLSGVKNYKI 762
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
V EN +DI+FL ++V G A SYG+ A LAGV +V+KRA +L++ + N
Sbjct: 763 LVQENEN-----DDIIFLRKIVRGGADRSYGIEVAKLAGVREDVVKRAYEILQSLEEN 815
>gi|329963688|ref|ZP_08301134.1| DNA mismatch repair protein MutS [Bacteroides fluxus YIT 12057]
gi|328527698|gb|EGF54690.1| DNA mismatch repair protein MutS [Bacteroides fluxus YIT 12057]
Length = 863
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 296/609 (48%), Gaps = 93/609 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 244 ITSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 293
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + E L + D+ I+ K SP
Sbjct: 294 LLKRWLVFPLKDVQPINERLNVVEYFFRQPGFKELIEEQLHLIGDLERIISKVAVGRVSP 353
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQL-RLLNFDIVEKAA 326
+ A +K C SL H+ + ++ I +S+R+++ R +N D
Sbjct: 354 REVVALKVALQAIGPIKEACMGADNASLNHIGE--QLNICQSIRDRIDREINNDPP---- 407
Query: 327 SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
+ VN+ G +++ G ELDELRQI ++L +V
Sbjct: 408 -----------------LLVNK------GGVIKPGVNAELDELRQIAYSGKDYLLKVQQR 444
Query: 387 E--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
E L +P L I Y + GY + + + E ++ ++
Sbjct: 445 ESELTGIPSLK-------IGYNNVFGYYIEVRNVHKEKVPQEWIRKQTLVNAER------ 491
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
Y T + +E + + KIL +E + +LV + F + N A LDC LS
Sbjct: 492 --YITQELKEYEEKILGAEDKILILETQLYTELVQALNEFIPAIQMNANQIARLDCLLSF 549
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGP 560
A A +NNY+RP++ + +LDI+ GRH + E + + ++ ND +D+ ++ IITGP
Sbjct: 550 ATAARENNYIRPVIADDDVLDIRQGRHPVIEKQLPIGEKYVANDVMLDSGSQQVIIITGP 609
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLH 612
N +GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM++++
Sbjct: 610 NMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMN 669
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELL 671
+ +L + +SL L DE G+GT T DGI + + + + L TH E L
Sbjct: 670 EAADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-L 728
Query: 672 NEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
NE + KS +R+K Y +SV +N ++FL +L G + S+G+H A LAG+P
Sbjct: 729 NE--MEKSFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKLAGMPKS 780
Query: 731 VIKRAAYVL 739
++KRA +L
Sbjct: 781 IVKRADEIL 789
>gi|292654720|ref|YP_003534617.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
gi|448293205|ref|ZP_21483382.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
gi|291372283|gb|ADE04510.1| DNA mismatch repair protein mutS [Haloferax volcanii DS2]
gi|445571474|gb|ELY26024.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
Length = 924
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 210/774 (27%), Positives = 351/774 (45%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P++ +
Sbjct: 117 QFLAAVVTDGDGVGLAFSDITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPEL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFATEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L R +A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRHDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASELLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + ++ + ++E + R AA+ + T+LA + + K
Sbjct: 372 LADAIEGTELADSPLAEVVSRPDR--------DAAADLRTDLADA-------LAEDPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L + G+ DELD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFQTGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRF---------VTEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + DL + ++ L AE+D SLA A N + RP LT L
Sbjct: 524 ELFE-------DLRERVARHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTEAGAL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND R+D++ I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLRMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|363755954|ref|XP_003648193.1| hypothetical protein Ecym_8081 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891393|gb|AET41376.1| Hypothetical protein Ecym_8081 [Eremothecium cymbalariae
DBVPG#7215]
Length = 772
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 176/661 (26%), Positives = 314/661 (47%), Gaps = 80/661 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
NK D T H +LQIF + ++ I + S+F +++ T +RLL++W L P
Sbjct: 96 NKMFLDDDTFH-SLQIFPPYESSANDSISKNAH-LSIFELLDHTTTQTSKRLLKSWLLSP 153
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA----SDW 285
+ DL+ + +R I F E A+ + + +K +P+I NS YT + W
Sbjct: 154 LTDLKEIEARYQVIETF-HQEYNSATFEQLRRQLKGLPNISSIINS---FYTGRTKLNTW 209
Query: 286 TA---FLKSICSLLHVNKIFEVGISESLREQLR-LLNFDIVEKAASCITTELAYVYELVI 341
++ +L+S + H+ + + + +L +++ LL+ D++ + + +
Sbjct: 210 SSLRRYLESSIEIYHLVILIKAAGNVNLFQRITDLLDPDVLRTLLHSLDAAIDFAVSQ-- 267
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE---- 397
D+N +++ G +LD+ R++Y+EL + L VA + +L E
Sbjct: 268 ---DMN-------AIIIKNGVHQDLDDHRKVYDELEKILSVVAKEAEYIIVNLLDEEEKY 317
Query: 398 ---------MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL--QGFEFAFSDMDGETKRLF 446
F+ VY+ Q+GYL+ + D LE + + + +M + ++
Sbjct: 318 NFAKQNSNNNFINA-VYVPQLGYLITV------DIELESILNNNAQLRWREMFRTSTTIY 370
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ + +D GDIY I D+E I L + L+ + +EL+ S A
Sbjct: 371 FKNEEVTNMDQYYGDIYALISDLEIEILYSLQKEVLKHKKMLIDSCMCFSELEVLSSFAH 430
Query: 507 VAHQNNYMRPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGR 553
V+ + Y +P LT E +L I+ GRH L E VDT+I ND +D N R
Sbjct: 431 VSELHKYSKPELTEENCILKIKGGRHALYETIVDTYISNDFDLDGGSFSDKDWCSHNYNR 490
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QS 605
+ ++TG N SGKS+++ Q LI +++HIG +VPA +A +G+ D ++ T E QS
Sbjct: 491 VAVLTGANASGKSVFLTQNGLIAYMAHIGCYVPATSAKIGVVDKILTRIKTRETVLKTQS 550
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCT 665
+F +D Q+ + T +SL L+DEFGKGT DG L G I++ + P+ + CT
Sbjct: 551 TFQLDAQQMAKCIGLMTEKSLLLIDEFGKGTDIIDGPALFGAIISHLGKNERCPRTIACT 610
Query: 666 HLTELLNEGCLPKS--ERLKFYTMSVLRPENNSTDV------EDIVFLYRLVPGHALLSY 717
H EL L S + F T +L + S + E I FLY++ G A S+
Sbjct: 611 HYNELFGPAILTDSIPGVVHFQTQILLNSVSASGKIDATILNEGITFLYKVSKGLAKSSF 670
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS---AQDQQYKNAVEKMLAFD 774
G++CA + G+ ++ RA ++++ + + + + + A+ Q+ + V++ L++D
Sbjct: 671 GVYCAKICGLNENIVSRAEHLVKLINDGEDLVEYCGKPTPEELAKFQENQEVVKRFLSWD 730
Query: 775 V 775
+
Sbjct: 731 L 731
>gi|338176045|ref|YP_004652855.1| DNA mismatch repair protein MutS [Parachlamydia acanthamoebae UV-7]
gi|336480403|emb|CCB87001.1| DNA mismatch repair protein mutS [Parachlamydia acanthamoebae UV-7]
Length = 849
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 178/643 (27%), Positives = 298/643 (46%), Gaps = 85/643 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV---SLNKFLKLDATAHEALQIF 186
V A+G LL L++E S+ I+ + ++ + +++L LD L++
Sbjct: 242 VHAAGALLQYLQSE-------------LSLPIEHITDIQPYTTSQYLSLDRMTLRHLELI 288
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
H S ++ G+++ TPMG RLLR W +P+L + ++ R A+ F
Sbjct: 289 DPLNHGSRKN--------TLLGVLDHSNTPMGARLLRQWIKQPLLSIPEIHQRQEAVQAF 340
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ LM + L+ V+D+ ++ + +S T D A S+ L + +
Sbjct: 341 YDTPSLMQRIGAVLEQVRDLERLMMRISSG--YATPRDLVALRFSMEPLPEIKTLLLTLA 398
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
S+S D + + I A V + + I + G + R+G+ EL
Sbjct: 399 SQSALLATEAQRIDFLPEMTRLIAN--ALVDDPPVKITE---------GKIFRDGYHPEL 447
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE---EKLD 421
DELR+I + ++ + + E + + + GY + + + EK+
Sbjct: 448 DELREISRDSKSWIARYQT-------QIRDETGLKSLKVGFNRMFGYYIEVSKGQAEKMP 500
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
D+ F+ + ++ E + TP+ + + + + +I +E + + L I
Sbjct: 501 DS-------FQRRQTLVNAER----FITPELKNYEAKVLNAEERISAIENELFQTLRQQI 549
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT--VD 539
FS +L A +DC SL A N Y+RP++ L I +GRH + E +
Sbjct: 550 GQFSKQVLTTAQALARIDCLRSLGEAARTNQYIRPLVDDSAHLKIVDGRHPVIEAAHAGE 609
Query: 540 TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
FIPNDT +D +D R+ +ITGPN +GKS YI+QVALI ++ +GSF+PA A VGL D
Sbjct: 610 KFIPNDTLLDGSDNRLLLITGPNMAGKSTYIRQVALITIMAQMGSFIPAKEAHVGLIDKV 669
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S ++ QS+FM+++ + +L ATS+SL +LDE G+GT T DGI +
Sbjct: 670 FTRIGASDDLSRGQSTFMVEMVETANILHNATSRSLVILDEIGRGTSTYDGISIAWSVAE 729
Query: 651 Y-FVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
+ +T K L TH EL E +P + Y ++V + ++I+FL ++
Sbjct: 730 HLLITEGKMAKTLFATHYWELTKLEEKIPGAVN---YNVAV------QENADNIIFLRKI 780
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQNNKHV 748
+ G SYG+H LAG+P VI RA + LE N K V
Sbjct: 781 IKGGTDKSYGIHVGRLAGLPPSVITRAKEILVHLEENANQKSV 823
>gi|78043130|ref|YP_360229.1| DNA mismatch repair protein HexA [Carboxydothermus hydrogenoformans
Z-2901]
gi|90109842|sp|Q3ACA5.1|MUTS_CARHZ RecName: Full=DNA mismatch repair protein MutS
gi|77995245|gb|ABB14144.1| DNA mismatch repair protein HexA [Carboxydothermus hydrogenoformans
Z-2901]
Length = 841
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 284/586 (48%), Gaps = 64/586 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
++ +L D + + L+I + R S+ G+++ T MG R L+ +
Sbjct: 243 IDSYLYFDESTRKNLEILRN----------REDNSSSLLGIIDFTQTAMGARKLKEELTK 292
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+L+ + RL+A+ + EL +L E LK + D+ + K + D
Sbjct: 293 PLLNLKAIADRLDAVEILVNDYELRENLRENLKNLYDLERLSIKLVCGTI--NPKDLIKI 350
Query: 289 LKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+S+ + H+ N I V N ++ E+ VY L+ I +
Sbjct: 351 KQSLPQIWHIKNSINHVK------------NKSVLFAEIYKNLPEMREVYNLIDKSIVDD 398
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFL--EEVASLELVQLPHLCKEMFVPCIVY 405
G +++ G+ +DE R+ EE +++ E E + L + Y
Sbjct: 399 PPVSPKDGGIIKNGYNPTVDEYRKAREEGQDWIINYEKKERERTGIKSLK-------VNY 451
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + L L ++ +R T + + +NL+ K
Sbjct: 452 NKVFGYFIEVTKANL------HLVPADYQRKQTMVNAERFI--TEELKHYENLILGASEK 503
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
+ ++E + ++ S I + + L +A + A LD +SLA+ A + ++ RP++T EP+L+
Sbjct: 504 LANLEYELFCEIRSEILKYQEDLKRAASAVALLDFLISLAVAAIEYDFTRPVITAEPVLE 563
Query: 526 IQNGRHVLQEMTVD--TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I+NGRH + E +V F+PND +D + + +ITGPN +GKS Y++Q ALIV L+ IG
Sbjct: 564 IKNGRHPVVEKSVGRANFVPNDLYLDTKENSLLLITGPNMAGKSTYMRQAALIVILAQIG 623
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA+ A VGL D + + QS+FM+++ + +LR ATS+SL LLDE G+
Sbjct: 624 SFVPAEYARVGLVDKILTRIGATDDLAKGQSTFMVEMIECNNILRNATSRSLILLDEVGR 683
Query: 635 GTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
GT T DGI + I Y + + + L TH EL EG +P + +VL E
Sbjct: 684 GTSTYDGISIAEAIIEY-IQKKIKARTLFSTHYHELTGLEGEIPGVK-----NFTVLVQE 737
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
E++ FL+++VPG SYG++ A LAG+P EV++RA +L
Sbjct: 738 KG----EEVKFLHKVVPGKTDKSYGIYVAKLAGLPREVVERAYEIL 779
>gi|402572919|ref|YP_006622262.1| DNA mismatch repair protein MutS [Desulfosporosinus meridiei DSM
13257]
gi|402254116|gb|AFQ44391.1| DNA mismatch repair protein MutS [Desulfosporosinus meridiei DSM
13257]
Length = 850
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 176/596 (29%), Positives = 281/596 (47%), Gaps = 65/596 (10%)
Query: 196 GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS 255
GIG K+G ++ +++ T G RLLR+W +P+L + + RLN+I + L
Sbjct: 268 GIG--KKG-TLLSVLDATHTAFGGRLLRHWIDKPLLKQDEIEGRLNSIEELIADAFLRKD 324
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L + L V D+ ++ K + + A D +++ L ++ I +E+L+ ++
Sbjct: 325 LQKLLSEVYDLERLMGKVSYGT--ANAKDLLLLTQTLALLPDISTIITSSTAETLKVKVP 382
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L+ L E + I+ N G L++ G+ E+DELR I
Sbjct: 383 KLD-------------GLGSFVENLQKAINPNPPLSLREGNLIKTGYSQEVDELRIISSG 429
Query: 376 LPEFLEEV--ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
E+L ++ A E + L I Y GY + I L ++
Sbjct: 430 GKEWLAQLENAERERTGIRSLK-------IGYNKVFGYYIEITHAN------AHLVPGDY 476
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+R TP+ +E + + K+ D+E + L + + ++
Sbjct: 477 QRKQTLSNAERFI--TPELKEYELKIIGAEEKLKDLEYELLLALREQVRANAKKIISVAQ 534
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDND 551
AE+D F+SLA VA N+Y+RP + + + I GRH + E ++ TF+PNDT + +
Sbjct: 535 VLAEIDVFVSLAEVAVNNHYVRPQIKTDGQIQITEGRHPVVEKMIEQGTFVPNDTLMSEN 594
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+ +ITGPN +GKS Y++QVALIV ++HIGSFVPA A + L D S + A
Sbjct: 595 QHLALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKKANIALVDRIFTRVGASDDLAAG 654
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVL 662
QS+FM+++H+V +L+ A+ SL +LDE G+GT T DG+ + + V PK L
Sbjct: 655 QSTFMVEMHEVAHILKYASRNSLIILDEIGRGTATYDGLSIAWAVSEHLVQNPQFTPKTL 714
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH EL + P + V E EDIVFL++++PG A SYG+
Sbjct: 715 FATHYHELTQLQDNFP-----GLVNLHVGVKERG----EDIVFLHKILPGRADRSYGIQV 765
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLK 777
A LAG+P E+I RA +L +E S E + A D+ + + FDV K
Sbjct: 766 ARLAGLPQELIIRAKALL--------LELESSEPVHASDKS-AEVITQFSLFDVPK 812
>gi|123399612|ref|XP_001301506.1| MutS domain III family protein [Trichomonas vaginalis G3]
gi|121882695|gb|EAX88576.1| MutS domain III family protein [Trichomonas vaginalis G3]
Length = 768
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 199/736 (27%), Positives = 354/736 (48%), Gaps = 60/736 (8%)
Query: 29 LEVWEDSNSDFPL-IDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSI 87
+ + E ++++F + + + ++ P II + + + +K T +++++ +
Sbjct: 32 VSISESNSANFGMNFEKIIHRYNPSIICMQPNIDNAIATIIKDVKDTE----IQVLEQND 87
Query: 88 FSYEQAWHRLIYLRVT-GMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
F+Y+ + + T D+ S+++ + L+ ++++ S+ V A G L V
Sbjct: 88 FNYQNGIDSMAQILFTVPSDEQDSVRQSV--LSGIVNLQSKPIVAAIGAL---------V 136
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
+ +K +++ S++E+S L L + A LQI + + HPS + KEG S+
Sbjct: 137 NFTNKKYQSPPIVSVFSMMEIS--NGLVLSSKAMSDLQIIKQELHPSIHQMTSIKEGVSL 194
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVK 264
F ++N+C T MG+ L++ F D+ +N R + + F E ++ L +K V
Sbjct: 195 FTLLNRCSTKMGKDRLKDLFTNIPNDINQINQRHDILEEFTKPEFHPMVNELVNKMKNVT 254
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ +I++ N W++ KS+ + + K + +L E L +F I +K
Sbjct: 255 DVTNIIQ--NVKKGTMKTKLWSSLAKSLSAAANFCKF---TLQNTLPENLTR-HFSITDK 308
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
+ + + L+ E+ I D ++ E + + + EL LR+IY+ L L E A
Sbjct: 309 LVNLLES-LSQQIEMTI---DFSKVAE----VYINDDYDQELTRLRKIYKNLDNLLNEKA 360
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
+EL+ L + +VY+ QIG+L +E L L G+ +F ET
Sbjct: 361 -VELIDDLPLKSPILSLSVVYLPQIGFLTMCQKEGLKREDLPN--GYLLSF-----ETDS 412
Query: 445 LFY-HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
FY ELD GDIY + I L + I S L + F E+D + S
Sbjct: 413 HFYCKNEMMNELDRNYGDIYGDLQKRTIKIIVKLSNRILSHSHELSELYKFIGEVDLYCS 472
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDTFIPNDTRIDNDG-RINIITGPN 561
LA+V+ + +++RP + + + I GRH +L+++T FIPN +D +I +ITGPN
Sbjct: 473 LAVVSVEGHWIRPTFSDKNEMKIVGGRHPLLEKLTPTDFIPNTIEFGSDKPKIIVITGPN 532
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS------KHMTAE--QSSFMIDLHQ 613
SGKS+ +KQ A+IVFL+ IG FVP + D +E S F DL
Sbjct: 533 GSGKSVLLKQTAIIVFLASIGCFVPCQFCELPQIDKIIPVFHNGGASEPFSSGFYDDLKM 592
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN 672
+ +R++T+++L L+DEFGK + +DG LL G I ++ P V++ TH ++L
Sbjct: 593 LSESIRKSTNRTLILVDEFGKTSNKDDGASLLAGFIRSMSDRGEMSPFVIISTHFRDILK 652
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
E + ++ TMSV + ++++FLY+ V G S+G CA G P E++
Sbjct: 653 ENVIDNKLFIRM-TMSV----DCLLSKDELLFLYKAVLGEDEKSFGFECAKRGGYPPELV 707
Query: 733 KRAAYVLEAAQNNKHV 748
+RA V ++ + V
Sbjct: 708 ERAKIVCKSLKEGTDV 723
>gi|448513837|ref|ZP_21616768.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|448526653|ref|ZP_21619922.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
gi|445692990|gb|ELZ45153.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|445698880|gb|ELZ50918.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
Length = 931
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 295/645 (45%), Gaps = 83/645 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 225 LDSELAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 273
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 274 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDREALAARLDA 324
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D A L + +
Sbjct: 325 VEALASAALARDRVREVLGDAYDLERLAARTTSGSAGARELLSVRDTLALLPDLADAIGG 384
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + L D V++ A+ + ELA + + K K G L
Sbjct: 385 TALADSPAAAVL---------DRVDRERAAALREELAEA-------LAEDPPKAKTGGGL 428
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++ G+ ELDEL + +EE+ +L+ +A E Q L H+ + YI Q+G +
Sbjct: 429 LKAGYDGELDELIERHEEVKSWLDGLAEREKRQHGLSHVTVDRNKTDGYYI-QVGKSVAD 487
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R + R G++ + + +
Sbjct: 488 QVPEHYREIKTLKNSKRF---VTDELAEKEREVLRLEEAR------GELEYDLFE----- 533
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH +
Sbjct: 534 --ELRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTTERRLDVEAGRHPV 591
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VG
Sbjct: 592 VEGTTD-FVPNDLRLDAERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVG 650
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 651 LVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIA 710
Query: 646 GGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y +V + L TH EL LP + + V E + ++ F
Sbjct: 711 WAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTF 760
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
L + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 761 LRTVRDGPTNRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 805
>gi|282889672|ref|ZP_06298211.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500246|gb|EFB42526.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 849
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 178/643 (27%), Positives = 298/643 (46%), Gaps = 85/643 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV---SLNKFLKLDATAHEALQIF 186
V A+G LL L++E S+ I+ + ++ + +++L LD L++
Sbjct: 242 VHAAGALLQYLQSE-------------LSLPIEHITDIQPYTTSQYLSLDRMTLRHLELI 288
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
H S ++ G+++ TPMG RLLR W +P+L + ++ R A+ F
Sbjct: 289 DPLNHGSRKN--------TLLGVLDHSHTPMGARLLRQWIKQPLLSIPEIHQRQEAVQAF 340
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ LM + L+ V+D+ ++ + +S T D A S+ L + +
Sbjct: 341 YDTPSLMQRIGAVLEQVRDLERLMMRISSG--YATPRDLVALRFSMEPLPEIKTLLLTLA 398
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
S+S D + + I A V + + I + G + R+G+ EL
Sbjct: 399 SQSALLATEAQRIDFLPEMTRLIAN--ALVDDPPVKITE---------GKIFRDGYHPEL 447
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE---EKLD 421
DELR+I + ++ + + E + + + GY + + + EK+
Sbjct: 448 DELREISRDSKSWIARYQT-------QIRDETGLKSLKVGFNRMFGYYIEVSKGQAEKMP 500
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
D+ F+ + ++ E + TP+ + + + + +I +E + + L I
Sbjct: 501 DS-------FQRRQTLVNAER----FITPELKNYEAKVLNAEERISAIENELFQTLRQQI 549
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT--VD 539
FS +L A +DC SL A N Y+RP++ L I +GRH + E +
Sbjct: 550 GQFSKQVLTTAQALARIDCLRSLGEAARTNQYIRPLVDDSAHLKIVDGRHPVIEAAHAGE 609
Query: 540 TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
FIPNDT +D +D R+ +ITGPN +GKS YI+QVALI ++ +GSF+PA A VGL D
Sbjct: 610 KFIPNDTLLDGSDNRLLLITGPNMAGKSTYIRQVALITIMAQMGSFIPAKEAHVGLIDKV 669
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S ++ QS+FM+++ + +L ATS+SL +LDE G+GT T DGI +
Sbjct: 670 FTRIGASDDLSRGQSTFMVEMVETANILHNATSRSLVILDEIGRGTSTYDGISIAWSVAE 729
Query: 651 Y-FVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
+ +T K L TH EL E +P + Y ++V + ++I+FL ++
Sbjct: 730 HLLITEGKMAKTLFATHYWELTKLEEKIPGAVN---YNVAV------QENADNIIFLRKI 780
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQNNKHV 748
+ G SYG+H LAG+P VI RA + LE N K V
Sbjct: 781 IKGGTDKSYGIHVGRLAGLPPSVITRAKEILVHLEENANQKSV 823
>gi|373501469|ref|ZP_09591823.1| DNA mismatch repair protein mutS [Prevotella micans F0438]
gi|371948285|gb|EHO66166.1| DNA mismatch repair protein mutS [Prevotella micans F0438]
Length = 888
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 167/609 (27%), Positives = 287/609 (47%), Gaps = 74/609 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K+++LD +L++ P H EG S+ ++++ VTPMG R
Sbjct: 267 ITSLARIEEEKYVRLDRFTIRSLELVA----PMH------DEGTSLLNVLDRTVTPMGGR 316
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D++ +N RL+ + +F + + E V D+ I+ + SP
Sbjct: 317 MLRRWMVFPLKDVKTINERLDVVDYFFREPDFRICVDEQFHRVGDLERIISRVAAGRVSP 376
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + L KS CS + + +G +L E LR
Sbjct: 377 REVVQLKNALMALQPVKSACSSTNNEVLKRIGEQINLCESLR------------------ 418
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
E + I + + G ++ +GF ELDELR I ++L E+ E+ Q
Sbjct: 419 ----ERIENEIHPDPPQLVAKGDVIADGFNSELDELRAIRTGGKQYLIEIQQKEIEQTGI 474
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ + + + GY + + + + ++ A ++ Y TP+ +
Sbjct: 475 TSLK-----VGFNNVFGYYLEVRNTFRNKVPADWIRKQTLAQAER--------YITPELK 521
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A +DC LS A A Y
Sbjct: 522 EYEAKILGADEKILALEAKLFAELVQDMQTFIPQIQINANLIAHVDCLLSFAKTAEAQRY 581
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP++ E ++DI+ GRH + E + + ++PND +D++ +I IITGPN +GKS +
Sbjct: 582 VRPVIDEENVIDIRQGRHPVIETQLPIGEQYVPNDVLLDSEHQQIMIITGPNMAGKSALL 641
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ GSFVPA++A +GL D S +++ +S+FM+++ + +L
Sbjct: 642 RQTALIVLLAQAGSFVPAESARIGLVDKIFTRVGASDNISLGESTFMVEMTEAANILNNV 701
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSE 680
T +SL L DE G+GT T DGI + + + + L TH EL + K
Sbjct: 702 TPRSLVLFDELGRGTSTYDGISIAWAIVEHLHEQPRARARTLFATHYHELNEMEKIFK-- 759
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL- 739
R++ Y ++V E N ++F+ +L G + S+G+H A +AG+P ++KRA VL
Sbjct: 760 RIRNYNVAV--QEQNGR----VIFIRKLQRGGSEHSFGIHVAEIAGMPPSIVKRAGVVLR 813
Query: 740 EAAQNNKHV 748
E +N V
Sbjct: 814 ELEADNSQV 822
>gi|218439471|ref|YP_002377800.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7424]
gi|218172199|gb|ACK70932.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7424]
Length = 885
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 183/649 (28%), Positives = 306/649 (47%), Gaps = 76/649 (11%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
+ S+ +G E + +RA+GGLL E I DT + + + + + ++ +FL
Sbjct: 259 VKSLEGLGCEHLPLAIRAAGGLL-----EYIEDTQKAYQ-----VPLQPLKTYNIAEFLI 308
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD + L+I QT + S G S+ +++ VT MG R LR W + P+LD++
Sbjct: 309 LDYPSRRNLEITQTVRDNSFYG--------SLLWALDRTVTAMGGRALRRWLIEPLLDIK 360
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ +R N I + L L + L+ + D+ I + + + A D A +S+
Sbjct: 361 GITARQNTIEELKENPTLRQDLRQLLREIYDLERITGRVGAGTA--NARDLLALAQSLVK 418
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L ++++ +G S LR A + +EL + + VIG + +
Sbjct: 419 LTDLSQLASLGTSPYLR-------------ALQKVPSELEILGKEVIGHLVESPPLHLKE 465
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
G ++R+G +LDE+R++YEE ++L A+LE+ + + Y GY +
Sbjct: 466 GGVIRDGINFQLDEMRRLYEEDQQWL---ANLEVTERQRTGVSNL--KVGYNKTFGYYLS 520
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+ K EQ + E + Y TP+ +E ++ + + + +E I
Sbjct: 521 MPRSKA-----EQAPDNYIRKQTLTNEER---YITPELKERESRILNAKDDLNRLEYEIF 572
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--V 532
L + + + + + A +D LA +A +Y RP + L++I +GRH V
Sbjct: 573 AGLRTKVAEKAAEIRQVAKAVAAIDVLAGLAEIAVYQDYCRPEMVDGRLIEIVDGRHPVV 632
Query: 533 LQEMTVDTFIPNDTRI------DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
Q + F+PN T + N + I+TGPN SGKS Y++QV LI ++ IGSFVP
Sbjct: 633 EQSLGAGFFVPNSTYLGSLLEEQNYPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFVP 692
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +G+ D + QS+FM+++++ +L ATS+SL LLDE G+GT T
Sbjct: 693 AKTAKLGICDRIFTRVGAMDDLATGQSTFMVEMNETANILNHATSRSLVLLDEIGRGTAT 752
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y ++ + + TH EL NE S + Y ++V N
Sbjct: 753 FDGLSIAWAVAEYLA-AEIQSRTIFATHYHEL-NELASILSN-VANYQVTVKEMPN---- 805
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+I+FL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 806 --EIIFLHQVRPGGADKSYGIEAGRLAGLPAVVIDRAKQVM--TQIEKH 850
>gi|222055849|ref|YP_002538211.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
gi|221565138|gb|ACM21110.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
Length = 870
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 173/616 (28%), Positives = 289/616 (46%), Gaps = 63/616 (10%)
Query: 149 LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFG 208
L++ + G A+ + S+ + + L LD L++ T + K S+ G
Sbjct: 246 LQETQKGKAA-HVTSIKAYTNAEHLLLDEATRRNLELTAT--------LAEGKRKGSLLG 296
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
+M++ T MG R ++ W P++ + R +A+ L A + L V D+
Sbjct: 297 LMDRTTTAMGGRKIKQWINYPLVTNRGITDRQDAVEALLQDAGSRAEIAALLNGVYDLER 356
Query: 269 ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKA 325
+ + + S A D A S+ + + ++ F + L E L L +++E
Sbjct: 357 LNGRISLAS--AGAKDLVAMKDSLARIPAIKEVLVAFSSNLLAGLNEGLNPLP-ELIELI 413
Query: 326 ASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS 385
I +V G ++ +G+ ELDELR I E F +A
Sbjct: 414 ERGIVENPPFVLR---------------EGGIIADGYNAELDELRAISREGKGF---IAR 455
Query: 386 LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
LE + I Y GY + + LD + ++ A ++
Sbjct: 456 LEAQEKKRTGISSL--KIRYNKVFGYYIEVTRTNLDSIPADYIRKQTLANAER------- 506
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y TP+ +E ++ + +I D+E ++ +++ + + + + A +D +SLA
Sbjct: 507 -YITPELKEYEDKVLGAEDRIRDLEFSLFQEIREAAAGHGNLIARTADCLATVDVLVSLA 565
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEM--TVDTFIPNDTRIDND-GRINIITGPNY 562
+AH+NNY RP + L I +GRH + E + F+PNDT +DND +I +ITGPN
Sbjct: 566 ELAHENNYCRPKVDDGTNLAIVDGRHPVIEALNQGERFVPNDTLLDNDENQIIVITGPNM 625
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQV 614
+GKS +++QVALIV ++H+GSFVPA A +G+ D S ++ QS+FM+++ +
Sbjct: 626 AGKSTFMRQVALIVLMAHMGSFVPATEARIGMVDRIFTRVGASDNLARGQSTFMVEMMEA 685
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNE 673
+LR AT +SL +LDE G+GT T DG+ + Y + K L TH EL
Sbjct: 686 ANILRNATPKSLVILDEIGRGTSTFDGVSIAWAVAEYLHDNGEHAAKTLFATHYHELTEL 745
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
+ R+K + ++V E N E I+FL ++VPG A SYG+ A LAG+P EVI+
Sbjct: 746 SVTRR--RIKNFNIAV--KEWN----EQIIFLRKIVPGGASHSYGIQVARLAGLPLEVIE 797
Query: 734 RAAYVLEAAQNNKHVE 749
RA +L + ++ E
Sbjct: 798 RAKEILVNLEKGEYAE 813
>gi|374290235|ref|YP_005037288.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377027|gb|AEU09215.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 809
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 275/554 (49%), Gaps = 51/554 (9%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
K G S+ +++K +TPMG RLL++W P+ ++ ++ R + FF + + + + + L
Sbjct: 290 KNGVSLIDIIDKTITPMGGRLLKHWIHFPLTNIIHIQKRYEIVEFFFSNISIRSFIQKKL 349
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNF 319
K + DI I+ K + + +S+ +++ + KIF ++ E
Sbjct: 350 KEIYDIERIISKMTIGKI--SPHEIIRLHQSLTAIVQIQKKIFSNKKYKTFLE------- 400
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
IV +C + + ++ ID N G ++ +G ELD +R +Y E+
Sbjct: 401 -IVNSFQNC-----NIISQKILDTIDPNTPYHIEKGNVIAKGVSKELDNIRNLYFSKKEY 454
Query: 380 LEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
LE++ + E + H K I Y + GY + I + K + +Q S+
Sbjct: 455 LEKLCNNEKLNTGIHNLK------IGYNNIFGYFLEIKKTKKYNIPSHWIQKQTLTNSER 508
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
Y T + + + + + KIL +E+ I DL++ I + L K AEL
Sbjct: 509 --------YTTEELKNYELQILNSEQKILSIEKKIFYDLINQILKYIIPLQKNAKIIAEL 560
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPNDTRIDN-DGRI 554
D S +L A +N Y++P + L I+ GRH + Q ++ ++IPND ++ + +I
Sbjct: 561 DVLCSFSLSALENYYVKPEINHSFRLCIKKGRHPVIERQFISKKSYIPNDVILNKKNQQI 620
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
IITGPN SGKS ++Q A+I+ ++HIGSFVPA A +GL D S +++ +S+
Sbjct: 621 IIITGPNMSGKSAILRQTAIIILMAHIGSFVPAKHAEIGLVDKIFSRVGASDNISLGEST 680
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
FM++++++ +L + +S +LDE G+GT T DGI + + + P L TH
Sbjct: 681 FMVEMNEMANILNNFSKRSFLILDEIGRGTSTYDGISIAWSIVEFLHKSPFRPLTLFATH 740
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
EL +R++ Y +SV + E+I+F+ +++ G + SYG+H A ++G
Sbjct: 741 YHELNKISSF--FQRIQNYHISVKKI------YENIIFMRKMIKGGSEHSYGIHVAKISG 792
Query: 727 VPAEVIKRAAYVLE 740
+P E+I RA +L+
Sbjct: 793 IPIEIIHRAKEILK 806
>gi|320161475|ref|YP_004174699.1| DNA mismatch repair protein MutS [Anaerolinea thermophila UNI-1]
gi|319995328|dbj|BAJ64099.1| DNA mismatch repair protein MutS [Anaerolinea thermophila UNI-1]
Length = 858
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 182/643 (28%), Positives = 308/643 (47%), Gaps = 77/643 (11%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
++ L+ G +RA+G LL L E + S +T S SL++F+
Sbjct: 213 QVASLDGFGLRGMSRAIRAAGALLQYLS--------ETQPSALNLLTRLST--YSLSEFM 262
Query: 174 KLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LDA L++ +T ++ G S+ +++ VTPMG+RLLR W +P+LDL
Sbjct: 263 VLDAATRRNLELTETIRNGQVEG--------SLLSVLDYTVTPMGKRLLRQWVSKPLLDL 314
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ + R N + F+ + L A L T++ + D+ ++ + + T D A ++
Sbjct: 315 KTIQQRQNVVETFVQNGLLRAELRATMRSLADLERLVNRIIAGH--ATPRDLVALRATLR 372
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV----IGIIDVNRS 349
++ H+ L N I A I +A +++ GI D +
Sbjct: 373 TMPHL-----------------LQNLSIDYPALQPIVASIATFPDILDLLERGITDDPPA 415
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G ++R G+ ELD + E E +A+LE V+ + + Y
Sbjct: 416 TLQNTG-VIRAGYSAELD---HVIEASRHAREWIANLEKVERERTGIKTL--KVGYNKVF 469
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + E ++ ++GE + TP+ +E ++L+ + +I ++
Sbjct: 470 GYYIEVSRGNAHAVPPEYIRKQTL----VNGER----FITPEMKEYESLVLNAEERIREL 521
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + R++ I + LL+ AELD LSLA A N Y+RP + E +L+I +G
Sbjct: 522 ETRLFREICEQIHQQGNALLQTARGLAELDALLSLAEAAALNQYVRPEVVNEDVLEIHDG 581
Query: 530 RHVLQEMTV---DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E + + F+PND + + IITGPN SGKS +++Q ALIV ++ IGSFVP
Sbjct: 582 RHPVVERYLSGGERFVPNDAIFEPGEIVRIITGPNMSGKSTFLRQTALIVLMAQIGSFVP 641
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A +G+ D + A QS+FM+++ ++ +L AT +SL +LDE G+GT T
Sbjct: 642 ASSARIGVVDRIFTRIGAQDEIHAGQSTFMVEMIEMANILHHATRRSLLILDEIGRGTST 701
Query: 639 EDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEG-CLPKSERLKFYTMSVLRPENNS 696
DG+ + + Y D+ + + TH EL LP ++ Y ++V +
Sbjct: 702 YDGVSIAWAVVEYIHNNPDLRARTIFATHYHELTQLAEILPG---VRNYNVAVTEADGK- 757
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+VFL+++ PG A SYG+H A LAG+P +I+RA +L
Sbjct: 758 -----VVFLHKITPGGADRSYGIHVAQLAGLPKPLIQRANEIL 795
>gi|153807044|ref|ZP_01959712.1| hypothetical protein BACCAC_01321 [Bacteroides caccae ATCC 43185]
gi|149130164|gb|EDM21374.1| DNA mismatch repair protein MutS [Bacteroides caccae ATCC 43185]
Length = 862
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 244 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 293
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L V D+ I+ K SP
Sbjct: 294 LLKRWIVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLVGDLERIISKVAVGRVSP 353
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G E+L L I ++ A I +
Sbjct: 354 REVVQLKVALQAIEPIKQACLEADNASLNRIG------ERLNLC-VSIRDRIAREINNDP 406
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELR+I ++L ++ E
Sbjct: 407 PLL---------INK------GGVIKDGVNADLDELRRISYSGKDYLLQIQQRE------ 445
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 446 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 496
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + +LV + F + N A LDC LS A VA +N
Sbjct: 497 LKEYEEKILGAEDKILVLETQLYTNLVQALTEFIPQIQVNANQIARLDCLLSFANVAREN 556
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I N+ +D+ +I IITGPN +GKS
Sbjct: 557 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANNVMLDSSTQQIIIITGPNMAGKSA 616
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 617 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 676
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 677 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 733
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 734 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 787
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 788 ILKQLESD 795
>gi|423073923|ref|ZP_17062658.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
gi|361855336|gb|EHL07320.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
Length = 846
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 276/572 (48%), Gaps = 59/572 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L + RL+ + + L L
Sbjct: 263 GQGKKG-TLLSVLDFTKTAFGGRLLRRWIEQPLLLKGEIEKRLDYVEALVEDSFLRGDLI 321
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ V D+ ++ K + + A D + +++ L + + G SE L+ + L
Sbjct: 322 QLFGKVYDLERLMGKVSYGT--ANARDLLSLAQTLGVLPQLRALLAEGKSEPLQAFIPAL 379
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D + T E A E I + D G L++ G+ E+DELR I
Sbjct: 380 EGLDPL-----AATLEQAINPEAPISLKD---------GNLLKAGYSVEIDELRSISSGG 425
Query: 377 PEFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
++ ++ S+E + L ++F I H +L I E + TL + F
Sbjct: 426 KAWVAKLESMEKDRTGIRSLKVGYNKVFGYYIEVTHANSHL--IPAEYIRKQTLANAERF 483
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
TP+ +E + + K+ +E + +L + + +L+A
Sbjct: 484 ----------------ITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAAKILEA 527
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID 549
+ AE+D + SLA A +++Y RP++ E L I GRH V++ M DT F+PNDT +
Sbjct: 528 AHALAEIDVYTSLAEAAVRHHYSRPVMKGEGGLTIIEGRHPVVESMLQDTSFVPNDTILT 587
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + +ITGPN +GKS Y++QVALIV ++ IGSFVPA AT+ + D S +
Sbjct: 588 EDKHLALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLA 647
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+ QS+FM+++++V +LR T QSL +LDE G+GT T DG+ + Y + PK
Sbjct: 648 SGQSTFMVEMYEVAHILRHVTPQSLIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKT 707
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH EL + L ++ F +R E+IVFL++++PG A SYG+
Sbjct: 708 LFATHYHELTD---LEETHSGIFNLHVGVREHG-----EEIVFLHKIIPGRADRSYGIQV 759
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
A LAG+PA ++ RA +L +++ R H
Sbjct: 760 AKLAGLPANLLHRAKIILHELESSAKESRQEH 791
>gi|207347057|gb|EDZ73364.1| YDL154Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 753
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 287/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L+ W + P+ + +
Sbjct: 101 LDENTISALNIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYARRILKFWLINPLTNKK 159
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 160 RIETRYSIIRTLLDKQNAIIFSDLTQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 219
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G +E +L+ DI K E E VI D + S++
Sbjct: 220 GIAIFQLVSSLKLGSNEG-----NILH-DIKNKVDISALKECLRKVETVI---DFDTSRD 270
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY L L +VA L LP CK E V
Sbjct: 271 TKTLT-INTGVDNRLDECRNIYNHLEGILLDVARETQIFLLNNLPQENCKTTKSLEKLVN 329
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 330 A-VYIPQLGYLVTISVLMEPLLDG--IPNLQWEEIFRS-----SENIYFKNGRVLELDET 381
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 382 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 441
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 442 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 501
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 502 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 561
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 562 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 621
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
+ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 622 EHIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 681
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 682 LSRDIVERA 690
>gi|423219973|ref|ZP_17206469.1| DNA mismatch repair protein mutS [Bacteroides caccae CL03T12C61]
gi|392624236|gb|EIY18329.1| DNA mismatch repair protein mutS [Bacteroides caccae CL03T12C61]
Length = 902
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 296/608 (48%), Gaps = 79/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ ++++ ++PMG R
Sbjct: 284 ITSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDRTISPMGAR 333
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D + +N RLN + +F + + E L V D+ I+ K SP
Sbjct: 334 LLKRWIVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLVGDLERIISKVAVGRVSP 393
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + +G E+L L I ++ A I +
Sbjct: 394 REVVQLKVALQAIEPIKQACLEADNASLNRIG------ERLNLC-VSIRDRIAREINNDP 446
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++++G +LDELR+I ++L ++ E
Sbjct: 447 PLL---------INK------GGVIKDGVNADLDELRRISYSGKDYLLQIQQRE------ 485
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P + Y + GY + + D E ++ ++ Y T +
Sbjct: 486 -SEETGIPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAER--------YITQE 536
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + +LV + F + N A LDC LS A VA +N
Sbjct: 537 LKEYEEKILGAEDKILVLETQLYTNLVQALTEFIPQIQVNANQIARLDCLLSFANVAREN 596
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSI 567
NY+RP++ +LDI+ GRH + E + + +I N+ +D+ +I IITGPN +GKS
Sbjct: 597 NYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANNVMLDSSTQQIIIITGPNMAGKSA 656
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 657 LLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILN 716
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 717 NVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHE-LNE--MEK 773
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 774 SFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANE 827
Query: 738 VLEAAQNN 745
+L+ +++
Sbjct: 828 ILKQLESD 835
>gi|330997284|ref|ZP_08321137.1| DNA mismatch repair protein MutS [Paraprevotella xylaniphila YIT
11841]
gi|329571079|gb|EGG52786.1| DNA mismatch repair protein MutS [Paraprevotella xylaniphila YIT
11841]
Length = 873
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 283/584 (48%), Gaps = 59/584 (10%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G S+ G++++ +TPMG RL+R W L P+ D + +N RL+ + +F E + + L
Sbjct: 286 GNSLLGVIDRTITPMGARLMRRWILFPLKDEKPVNERLDVVDYFFREPEFKELVSDQLHL 345
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNF 319
+ D+ I+ K + + D ++ ++ + E E+L+ EQL L
Sbjct: 346 MGDLERIISKVSVGRV--SPRDVVQLKVALQAIEPIKIACEHASDETLKRIGEQLNLCA- 402
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
I ++ A I + + VN+ G ++ EG ELDELR I E ++
Sbjct: 403 SIRDRIAREIQNDPPLL---------VNK------GGVIAEGVDRELDELRHIAFEGKDY 447
Query: 380 LEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
L ++ EL +P L I Y + GY + + D + ++ ++
Sbjct: 448 LLKIQQRETELTGIPSLK-------ISYNNVFGYYLEVRNTHKDKVPADWIRKQTLVNAE 500
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y T + +E + + KIL +E + +LV + F+ + N A
Sbjct: 501 R--------YITQELKEYEEKIMGAQDKILVLETKLYNELVLALAEFTPAIQINANLLAR 552
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTV-DTFIPNDTRIDNDG-R 553
LDC LS A VA N Y+RP++ + +LDI+ GRH + +E+ V + +I ND +D + +
Sbjct: 553 LDCLLSFAQVAQDNRYIRPVIQDDDVLDIKQGRHPVIEKELPVGEQYIANDVYLDTEKQQ 612
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I IITGPN +GKS ++Q ALI ++ IG FVPA++A +GL D S +++ +S
Sbjct: 613 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISMGES 672
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVC 664
+FM+++++ +L +S+SL L DE G+GT T DGI + + Y + L
Sbjct: 673 TFMVEMNEAANILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHENKKGKARTLFA 732
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL L R+K Y +SV + + ++FL +L G + S+G+H A L
Sbjct: 733 THYHELNEMEKL--YSRVKNYNVSVREVD------QKVIFLRKLERGGSEHSFGIHVAKL 784
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVE 768
AG+P ++ RA +L+ ++ + + + Q Q N V+
Sbjct: 785 AGMPKSIVSRANTILKELESANSKDVMKNSRGAKQVMQADNGVQ 828
>gi|89894338|ref|YP_517825.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense Y51]
gi|122483100|sp|Q24X61.1|MUTS_DESHY RecName: Full=DNA mismatch repair protein MutS
gi|89333786|dbj|BAE83381.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 862
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 276/572 (48%), Gaps = 59/572 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L + RL+ + + L L
Sbjct: 279 GQGKKG-TLLSVLDFTKTAFGGRLLRRWIEQPLLLKGEIEKRLDYVEALVEDSFLRGDLI 337
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ V D+ ++ K + + A D + +++ L + + G SE L+ + L
Sbjct: 338 QLFGKVYDLERLMGKVSYGT--ANARDLLSLAQTLGVLPQLRALLAEGKSEPLQAFIPAL 395
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D + T E A E I + D G L++ G+ E+DELR I
Sbjct: 396 EGLDPL-----AATLEQAINPEAPISLKD---------GNLLKAGYSVEIDELRSISSGG 441
Query: 377 PEFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
++ ++ S+E + L ++F I H +L I E + TL + F
Sbjct: 442 KAWVAKLESMEKDRTGIRSLKVGYNKVFGYYIEVTHANSHL--IPAEYIRKQTLANAERF 499
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
TP+ +E + + K+ +E + +L + + +L+A
Sbjct: 500 ----------------ITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAAKILEA 543
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID 549
+ AE+D + SLA A +++Y RP++ E L I GRH V++ M DT F+PNDT +
Sbjct: 544 AHALAEIDVYTSLAEAAVRHHYSRPVMKGEGGLTIIEGRHPVVESMLQDTSFVPNDTILT 603
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + +ITGPN +GKS Y++QVALIV ++ IGSFVPA AT+ + D S +
Sbjct: 604 EDKHLALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLA 663
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+ QS+FM+++++V +LR T QSL +LDE G+GT T DG+ + Y + PK
Sbjct: 664 SGQSTFMVEMYEVAHILRHVTPQSLIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKT 723
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH EL + L ++ F +R E+IVFL++++PG A SYG+
Sbjct: 724 LFATHYHELTD---LEETHSGIFNLHVGVREHG-----EEIVFLHKIIPGRADRSYGIQV 775
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
A LAG+PA ++ RA +L +++ R H
Sbjct: 776 AKLAGLPANLLHRAKIILHELESSAKESRQEH 807
>gi|84784004|gb|ABC61967.1| Msh5-like protein [Trichomonas vaginalis]
Length = 768
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 200/736 (27%), Positives = 353/736 (47%), Gaps = 60/736 (8%)
Query: 29 LEVWEDSNSDFPL-IDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSI 87
+ + E ++++F + + + ++ P II + + + +K T +++++ +
Sbjct: 32 VSISESNSANFGMNFEKIIHRYNPSIICMQPNIDNAIATIIKDVKDTE----IQVLEQND 87
Query: 88 FSYEQAWHRLIYLRVT-GMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
F+Y+ + + T D+ S+++ + L+ ++++ S+ V A G L V
Sbjct: 88 FNYQNGIDSMAQILFTVPSDEQDSVRQSV--LSGIVNLQSKPIVAAIGAL---------V 136
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSV 206
+ +K +++ S++E+S L L + A LQI + + HPS + KEG S+
Sbjct: 137 NFTNKKYQSPPIVSVFSMMEIS--NGLVLSSKAMSDLQIIKQELHPSIHQMTSIKEGVSL 194
Query: 207 FGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVK 264
F ++N+C T MG+ L++ F D+ +N R + + F E ++ L +K V
Sbjct: 195 FTLLNRCSTKMGKDRLKDLFTNIPNDINQINQRHDILEEFTKPEFHPMVNELVNKMKNVT 254
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ +I++ N W++ KS+ + + K + +L E L +F I +K
Sbjct: 255 DVTNIIQ--NVKKGTMKTKLWSSLAKSLSAAANFCKF---TLXNTLPENLTR-HFSITDK 308
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
+ + + L+ E+ I D ++ E + + + EL LR+IY+ L L E A
Sbjct: 309 LVNLLES-LSQQIEMTI---DFSKVAE----VYINDDYDQELTRLRKIYKNLDNLLNEKA 360
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
+EL+ L + +VY+ QIG+L +E L L G+ +F ET
Sbjct: 361 -VELIDDLPLKSPILSLSVVYLPQIGFLTMCQKEGLKREDLPN--GYLLSF-----ETDS 412
Query: 445 LFY-HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
FY ELD GDIY + I L + I S L + F E+D + S
Sbjct: 413 HFYCKNEMMNELDRNYGDIYGDLQKRTIKIIVKLSNRILSHSHELSELYKFIGEVDLYCS 472
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDTFIPNDTRIDNDG-RINIITGPN 561
LA+V+ + +++RP + + I GRH +L+++T FIPN D +I +ITGPN
Sbjct: 473 LAVVSVEGHWIRPTFSDKNEKKIVGGRHPLLEKLTPTDFIPNTIEFGGDKPKIIVITGPN 532
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS------KHMTAE--QSSFMIDLHQ 613
SGKS+ +KQ A+IVFL+ IG FVP + D +E S F DL
Sbjct: 533 GSGKSVLLKQTAIIVFLASIGCFVPCQFCELPQIDKIIPVFHNGGASEPFSSGFYDDLKM 592
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN 672
+ +R++T+++L L+DEFGK + +DG LL G I ++ P V++ TH ++L
Sbjct: 593 LSESIRKSTNRTLILVDEFGKTSNKDDGASLLAGFIRSMSDRGEMSPFVIISTHFRDILK 652
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
E + ++ TMSV + ++++FLY+ V G S+G CA AG P E++
Sbjct: 653 ENVIDNKLFIRM-TMSV----DCLLSKDELLFLYKAVLGEDEKSFGFECAKRAGYPPELV 707
Query: 733 KRAAYVLEAAQNNKHV 748
+RA V ++ + V
Sbjct: 708 ERAKIVCKSLKEGTDV 723
>gi|118443496|ref|YP_878178.1| DNA mismatch repair protein MutS [Clostridium novyi NT]
gi|166232119|sp|A0Q0M6.1|MUTS_CLONN RecName: Full=DNA mismatch repair protein MutS
gi|118133952|gb|ABK60996.1| DNA mismatch repair protein MutS [Clostridium novyi NT]
Length = 909
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 293/587 (49%), Gaps = 57/587 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L++ +T + S G S+ +++K T MG RLLR W +P++
Sbjct: 259 YLSIDINSRRNLELTETLRDKSKKG--------SLLWVLDKTTTAMGARLLRKWVEQPLI 310
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
E + +R NA+ L + L+ L LK V DI + K +S + A + + S
Sbjct: 311 HKEIIENRQNAVEEILNNVPLLDDLRNNLKDVYDIERLAGKISSKTV--NAKELLSLKNS 368
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
I +L + KI E N D+++ S + L +Y L+ I + +
Sbjct: 369 IGNLPIIKKIIEN------------YNTDLLKNIYSSLDC-LEDLYSLLDNSILPSPALS 415
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G+ +DELR E+ +ASLE + + + Y GY
Sbjct: 416 IKEGGIIKDGYNKTIDELRMAKSHGTEW---IASLE--EQERNITGIKSLKVKYNKVFGY 470
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + + L Q+ + +R TP+ +E+++ + K++++E
Sbjct: 471 YIEITK-----SNLNQVPENRYIRKQTLANCERFI--TPELKEVEDKILGAQEKLMELEY 523
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ ++ I + + +D SLA+VA ++NY +PI+ L+ L I++GRH
Sbjct: 524 NVFVEIRELIEKEIYRIKNTAKLISSIDVLQSLAIVALESNYSKPIIKLDGELLIKDGRH 583
Query: 532 VLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + D+F+ NDT +DN D ++ +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 584 PVVEKMIPRDSFVSNDTILDNKDHQLLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAK 643
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A + + D S + +S+FM+++ +V +L AT++SL LLDE G+GT T D
Sbjct: 644 EAEIVICDKIFTRIGASDDLARGKSTFMVEMWEVANILNNATNKSLILLDEVGRGTSTYD 703
Query: 641 GIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
G+ + I Y ++ K L TH EL + EG K + +K Y+++V + +
Sbjct: 704 GLSIAWAVIEYICKDNNLKSKTLFATHYHELTSLEG---KIKGVKNYSIAVKKVD----- 755
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+DI+FL +++ G A SYG+ A LAG+P+ V RA +L + N
Sbjct: 756 -DDIIFLRKIIEGGADESYGIEVAKLAGIPSVVTNRAKEILNTLEEN 801
>gi|387907224|ref|YP_006337560.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582117|gb|AFJ90895.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blaberus
giganteus)]
Length = 857
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 174/617 (28%), Positives = 300/617 (48%), Gaps = 82/617 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + + + +D L+IF HP + KEG S+ +++ +TPMG R
Sbjct: 256 ISNIRRIKKEEHVSIDDFTFRNLEIF----HPLN------KEGVSLIKILDHTITPMGGR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+NW + P+ ++ + R + + + + LK V DI I+ K SP
Sbjct: 306 LLKNWIIFPLKNIFRIRKRHQIVEKLSTNNVIRIFIKTKLKNVYDIERIISKIAIGKISP 365
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN-FD----IVEKAASCITT 331
+YT SL+ +N+I + +S+ + + N F+ I EK A+ I
Sbjct: 366 REMYTLYK---------SLISINEIQKKCLSQGDKILTNIGNSFEDCNIICEKIANTIQE 416
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
+ EKG G ++ +GF ELDE+R +Y ++LE++ S+E
Sbjct: 417 NPPH-------------KIEKGKGNVINQGFSKELDEIRTMYFFQKKYLEKLCSIE---- 459
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
L + I Y + GY + K + L +Q T + Y T +
Sbjct: 460 -KLKTGINNLKIGYNNIFGYFFEVKISKKEKVPLHWIQK--------QTLTNSIRYITEE 510
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+ + + + KI +E+ I +L++H+ L K A+LD S + +A +N
Sbjct: 511 LKNYELKIFNAEQKIFSLEKEIFNNLINHMLDNIKSLQKNAKTIAKLDVLCSFSSLALEN 570
Query: 512 NYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPNDTRID-NDGRINIITGPNYSGKSI 567
NY++P + + I GRH + Q ++ ++IPND ++ ++ +I IITGPN SGKS
Sbjct: 571 NYIKPKVNDSLQISIIKGRHPVIERQFISKSSYIPNDIILNKSNQQILIITGPNMSGKSA 630
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q A+I+ ++H+GSFVPA A +GL D S +++ +S+FM+++++ +L
Sbjct: 631 ILRQTAIIILMAHVGSFVPAKYAEIGLIDKIFSRVGASDNISLGESTFMVEMNETASILN 690
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
+ +S +LDE G+GT T DGI + I + + P L TH E LNE L
Sbjct: 691 NLSKRSFIILDEIGRGTSTYDGISIAKSIIEFLHEKNFRPLTLFATHYHE-LNEMSLF-F 748
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N I+F+ +LV G + S+G++ A ++G+P E+I+RA +L
Sbjct: 749 KRIKNYHISVKEINDN------IIFMRKLVTGGSEHSFGIYVAKISGMPIEIIERAKKIL 802
Query: 740 EAAQ--------NNKHV 748
+ + NNK V
Sbjct: 803 NSLKLKKNKTEINNKKV 819
>gi|260893758|ref|YP_003239855.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
gi|260865899|gb|ACX53005.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
Length = 865
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 280/592 (47%), Gaps = 68/592 (11%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
F+ LDA L++ ++ S G ++ +++ +T MG R LR+W +P+L
Sbjct: 262 FMLLDAATRRNLELTRSLADGSRRG--------TLLEVLDYTLTGMGGRRLRDWIEQPLL 313
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + RL A+++ + + LK + DI + + + + ++ L
Sbjct: 314 DPAAIEERLEAVAYLVEQAVEREEIRARLKKMGDIERLASRLS-----FGLANARDLLSL 368
Query: 292 ICSLLHVNKIFEV-----GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
SL+ +I E G+ LR+QL L+ DI A I + +
Sbjct: 369 KDSLILAGEIKERLSGAEGLLGRLRDQLENLD-DIASLIAEAIAPDPPATLQ-------- 419
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G L+REG+ E+D LR I + ++L E+ + E + K + I Y
Sbjct: 420 -------EGGLIREGYHPEVDRLRAIRRDAHKYLAELEAKEKERTG--IKSL---KIGYN 467
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + T L + T+ + TP+ +E + ++ ++
Sbjct: 468 RVFGYYI--------EVTKPNLHLVPPDYQRRQTLTQAERFITPELKEYEEMILGAEERL 519
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+E + + + D +L+A ++D SLA+ A + NY+RP ++ ++ I
Sbjct: 520 YSLEYELFCQVRDQVQAHLDRILRAARAIGQIDALASLAVAALKGNYVRPRVSSSDIIRI 579
Query: 527 QNGRHVLQEMTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH + E + F+PNDT + D R+ IITGPN GKS Y++QVALIV ++ IGS
Sbjct: 580 KEGRHPVVERALGPGNFVPNDTWLGGPDKRVAIITGPNMGGKSTYMRQVALIVLMAQIGS 639
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA A +G+ D + ++ QS+FM+++ + +L QATS+SL ++DE G+G
Sbjct: 640 FVPAAEAEIGVVDRIFTRVGAADNLYGGQSTFMVEMGECRTILTQATSRSLVVMDEVGRG 699
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T T DG+ + + Y V + K L TH EL + LP F +R E
Sbjct: 700 TSTYDGMSIARAIVEYLVH-RIKAKTLFSTHYHELTDLARLPGV----FNLTVAVREEAG 754
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ FLYR++PG A SYGLH A LAG+P EVI+RA +LE + +
Sbjct: 755 R-----VSFLYRVLPGKADKSYGLHVAALAGLPKEVIERAKEILEELERRQE 801
>gi|402311024|ref|ZP_10829979.1| DNA mismatch repair protein MutS [Eubacterium sp. AS15]
gi|400366146|gb|EJP19182.1| DNA mismatch repair protein MutS [Eubacterium sp. AS15]
Length = 853
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 289/585 (49%), Gaps = 70/585 (11%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R ++F ++NK T MG R L+ L+P+ ++ RL +S F+ ++
Sbjct: 274 RRNSNNTLFDVLNKTNTSMGSRKLKQNLLKPLNSESDIKQRLEVLSCFVDEYSFTMNISS 333
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
LK + D+ I S +Y + L SL+ + K+ E + ++ N
Sbjct: 334 ILKEIYDLERI-----SNRIVYDSVSQKDLLNLKTSLICIKKL------EDIFKEKDNEN 382
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVN---RSKEKGYGTLVREGFCDELDELRQIYEE 375
F ++ K S + Y ++I +I+ + ++ Y ++ + ++L R++ +
Sbjct: 383 FTLIYKNISSVN------YAVIIDLIEKSIEEMGEDLKYKHKIKSSYDEKLAYYRKLMDN 436
Query: 376 LPEFL--EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
+ L E E + +L I Y GY + I + L + + +
Sbjct: 437 SSDILIKMEAEEREKTGIKNLK-------INYNKVFGYYIEISKGALQNAKIPE------ 483
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD-------MERAITRDLVSHICLFSD 486
D E ++ + R ++ L +I ++L +E ++ + I + D
Sbjct: 484 -----DYERRQTLVSSE--RFINQSLKEIEQEMLSARQSEVSLENSLYSQVKDEIKKYID 536
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPN 544
+++ + A++D + SL+ A +N+Y++P++ ++ L I+NGRH + E +T D F+PN
Sbjct: 537 RIMRLASIVADVDVYTSLSKTAIENDYVKPMIAVDNKLIIKNGRHPVIEKILTDDGFVPN 596
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
DT +D D + +IITGPN +GKS Y++QVALIV ++HIGS+VPA A++ + D
Sbjct: 597 DTIVD-DEKTHIITGPNMAGKSTYMRQVALIVLMAHIGSYVPASFASIPIIDGIYTRIGA 655
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
S ++ QS+FM+++ +V +L+ AT +SL +LDE G+GT T DG+ L + Y + +
Sbjct: 656 SDDLSMGQSTFMVEMSEVSNILKNATEKSLVILDEIGRGTSTYDGMSLAFAIVEY-IASN 714
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
+ K LV TH EL + + +K Y M V D +I FL ++V G A S
Sbjct: 715 IKAKTLVSTHYHELT--SLESRFDNIKNYCMLV-------DDTTEIKFLKKIVEGRADKS 765
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
YG+H A+LA +P EV++RA +L + + +++ S Q+Q
Sbjct: 766 YGIHVAMLADIPYEVLERANVILSRLETKEKKSVSNYKKNSPQEQ 810
>gi|261327153|emb|CBH10129.1| mismatch repair protein MSH5, putative [Trypanosoma brucei
gambiense DAL972]
Length = 790
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 181/646 (28%), Positives = 287/646 (44%), Gaps = 82/646 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCVTPMGR 219
+ V EV L +DA +LQI +T+ HP + GIG++KEG S+ ++++ P+G
Sbjct: 159 VADVAEVPPAGVLYVDADTLSSLQITRTEAHPMDYQGIGQSKEGLSLLSVVDRTSGPLGG 218
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPS 277
LLR WF P+ + L R + + FF + +M +L +LK ++ I K +
Sbjct: 219 ALLRQWFALPLQNERELQQRYSVVDFFTNRDNHSIMTNLRRSLKRLRQPGSIFTKMRASK 278
Query: 278 FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T D+ + L+S LL + + +E+ R L + ASC +L +
Sbjct: 279 --HTTGDYDSLLRSTLGLLQIASLLS---TEAHRFPL------FMRIVASCQAAQLEEMS 327
Query: 338 ELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL 394
+++ I + R G +R G ELDELR+ + L E L VA E LP
Sbjct: 328 DIITRSISLTREPRDTLGKTYVRIRPGCDPELDELREHFAHLDELLTRVAEEEKQGLPPH 387
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+ + C + Q G+++ + E + +E DG F+ T TR
Sbjct: 388 WRPGTLLC-AFAPQWGHVIVLPHCPPTLLETELPRDWELVLQTDDGP----FFKTSLTRR 442
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD +GD+ ILD E + R V H L L ++ AELDC + AL A + +
Sbjct: 443 LDEEVGDLRSAILDREGEVQRR-VDHRLLELSPALIPLHLCAELDCLIGFALCALEGQWS 501
Query: 515 RPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQV 572
RP + +P +L+I H + +P I R+ ++TG N SGKS++I +
Sbjct: 502 RPEIVPDPGVLEISRAVHPILARMSQPVVPCSLTIRRSADRVCVVTGANGSGKSVFITTI 561
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS---KHMTAE--------------QSSFMIDLHQVG 615
A VFL+HIGS+VP A +GL D+ H + SSF +L +
Sbjct: 562 AHTVFLAHIGSYVPCAHAAIGLIDTFIALHTPSACRGNEDLTFAVKELHSSFGNELASMS 621
Query: 616 MMLRQATSQS----------LCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVC 664
ML++ S+ L ++DEFGKGTL+ DG LL ++ F++ + P VL+
Sbjct: 622 RMLQRCGSRCRESDEGAARMLLVIDEFGKGTLSVDGAALLAASLRTFISMGNQRPLVLLA 681
Query: 665 THLTELLNEGCLPKSERLKFYTMSVL------RPENN-----STDVEDIV-FLYRLVPGH 712
TH E + +P+ E + ++ L RP + D D V Y LVP +
Sbjct: 682 THYMEAVQPNIVPRGEIILIEMLTTLLESSRKRPRDGVRAHLGADSTDFVGGSYELVPSY 741
Query: 713 ALL-----------------SYGLHCALLAGVPAEVIKRAAYVLEA 741
+ S LH A VP +++RA V+ +
Sbjct: 742 NAVPVRDVGEDGKLPDDEVSSRALHFAFQHSVPEVLLRRAWSVMTS 787
>gi|452203891|ref|YP_007484024.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi DCMB5]
gi|452110950|gb|AGG06682.1| DNA mismatch repair protein MutS [Dehalococcoides mccartyi DCMB5]
Length = 858
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 182/639 (28%), Positives = 310/639 (48%), Gaps = 90/639 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
+ A+G LL LE E +L+Q E + T D ++++D+ L+IF++
Sbjct: 227 ISAAGALLNYLE-ETQKSSLKQLERLSVYTTAD---------YMQMDSHTLSNLEIFRSS 276
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
S G S+ G++++ T MG RLLR + +P+L ++ RL+A+ +F
Sbjct: 277 GGNSLKG--------SLLGILDQTKTAMGGRLLRKFLGQPLLKQSDIEKRLSAVDYFFEE 328
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV----- 304
SL ++L + D+ + + + + + + S+ ++ +++ F +
Sbjct: 329 SLARTSLAKSLGQIADMERMANRIRQKTIL--PRELISLKNSLETVSAIHRQFGLMPPPR 386
Query: 305 ------GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
G+ + L E L ++N I + S + G G ++
Sbjct: 387 LAYFLNGL-KPLPEMLDIINKTITDDPPSTL-----------------------GDGKVI 422
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
R GF E+D+L + + FL ++ + E + K + + Y GY + I
Sbjct: 423 RAGFDPEMDKLCSLAGDARTFLSQMETRERERTG--IKSL---KLGYNRVFGYYIEISNA 477
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
L D E ++ ++ + TP+ +E +NL+ + ++L+ME + ++
Sbjct: 478 NLGDVPPEFIRKQTLVNAER--------FITPELKEYENLILNAKERLLEMETGLYEQVL 529
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEM 536
+ + F LL A LD + A VA +N+Y+RP+ E LDI+ GRH V Q +
Sbjct: 530 NQLGGFYSALLANAAALAALDVLSAFAEVAVRNSYVRPVFHPENRLDIRKGRHPMVEQGL 589
Query: 537 TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+ ND + D +I I+TGPN +GKS Y+KQ ALIV ++ IGS+VPA+ A + LT
Sbjct: 590 GYGSFVANDISLSAEDCQIIILTGPNMAGKSTYLKQTALIVLMAQIGSYVPAETAELCLT 649
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + ++A QS+FM+++ + +L ATS+SL +LDE G+GT T DG+ +
Sbjct: 650 DRIFTRIGAREDLSAGQSTFMVEMVETASILNTATSRSLLILDEIGRGTSTYDGLAIAQA 709
Query: 648 TINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + + K L TH EL+ LP R+ Y ++V S D ++VFL
Sbjct: 710 VVEYIHSQPSLTAKTLFATHYHELVELASYLP---RVTNYNIAV------SEDRGEVVFL 760
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
+++VPG SYG+H A LAG+P VIKRA VL +N
Sbjct: 761 HKIVPGGVDKSYGIHVAKLAGLPKWVIKRAYEVLTELEN 799
>gi|229829057|ref|ZP_04455126.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
gi|229792220|gb|EEP28334.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
Length = 895
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 174/585 (29%), Positives = 286/585 (48%), Gaps = 64/585 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ LDA L++ +T + G S+ +++K T MG R+LR+ +P++
Sbjct: 279 YMLLDAATRRNLELVETLREKEKRG--------SLLWVLDKTRTAMGARMLRSRIEQPLI 330
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D E + +R +A+ L + E L V D+ ++ + + D AF S
Sbjct: 331 DEEEIINRYDALDEMLSDMISREEIREYLNPVYDLERLITRITYQT--ANPRDLVAFASS 388
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + + S +++ L + D +E + I++ +A + S E
Sbjct: 389 VAVLPAIRALLADFSSRNMKRILD--DMDPLEDIKTLISSAIAEEPPI--------SSHE 438
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++R G+ E+D LR + ++L E+ + E + K + I Y GY
Sbjct: 439 ---GGIIRAGYNQEIDRLRAAATDGKQWLAELETREREKTG--IKNLR---IKYNRVFGY 490
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + T L F T ++TP+ +EL+N + ++L +E
Sbjct: 491 YL--------EVTNSYLNLVPDYFIRKQTLTNAERFYTPELKELENTILGSADRLLALEN 542
Query: 472 AI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+ RD V + +A+ A LD + SLA VA N + RP L +L+I+N
Sbjct: 543 ELFCQVRDRVGQEVVRIQKTARAI---ASLDFYQSLAKVAEDNRFCRPRLNKRGILEIKN 599
Query: 529 GRH-VLQEMTVD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH V+++M D FI NDT +DN R++IITGPN +GKS Y++Q A+IV ++ +GSFV
Sbjct: 600 GRHPVVEKMLRDGDFIANDTYLDNKSHRLSIITGPNMAGKSTYMRQNAIIVLMAQVGSFV 659
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA+AA + + D S + + QS+FM+++ +V +LR ATS+SL +LDE G+GT
Sbjct: 660 PAEAANISVVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATSKSLLILDEIGRGTS 719
Query: 638 TEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ + + Y + K L TH EL EG + + + Y ++V
Sbjct: 720 TFDGLSIAWAMVEYIANSRLIGAKTLFATHYHELTELEG---RIDGVNNYCVAV------ 770
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++IVFL ++VPG A SYG+ A LAGVP VI+RA + E
Sbjct: 771 KEKGDEIVFLRKIVPGGADRSYGIQVAKLAGVPDGVIERAKEISE 815
>gi|379011551|ref|YP_005269363.1| DNA mismatch repair protein MutS1 [Acetobacterium woodii DSM 1030]
gi|375302340|gb|AFA48474.1| DNA mismatch repair protein MutS1 [Acetobacterium woodii DSM 1030]
Length = 881
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 300/639 (46%), Gaps = 94/639 (14%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQI 185
E + A+G LL L+ E+ +T I +V + N F+ LD + L++
Sbjct: 237 EYAIAAAGALLQYLD-----------ETQKRVLTHIKTVRYYNSNDFMVLDLSTRRNLEL 285
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
QT + G S+ G+++K VT MG R LR W P+L+ + R +
Sbjct: 286 TQTLRTLDKKG--------SLLGVLDKTVTAMGGRTLRRWVEAPLLNRARILERQGCVEA 337
Query: 246 FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVG 305
F + + + + V D+ + K + + D A +S+ +L + E+
Sbjct: 338 FFTNAAHLPNFKNIMTRVYDLERLCGKLSFGTI--NPKDLLALKQSLSTLPLIKDFVELL 395
Query: 306 ISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDE 365
S+ LR L + D + L ++E + ID G +++ GF E
Sbjct: 396 DSDKLR---HLFDTDDL----------LTDIWEYIEKSIDDEAPMVIKDGHVIKTGFHHE 442
Query: 366 LDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL 425
+D R+ E+ +++ E+ E + K + V Y GY + + + +
Sbjct: 443 IDTFREAAEKGQDWIRELECQERERTG--IKNLKVK---YNRIFGYFIEVTKSNIAQVPE 497
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
+ ++ A ++ Y TP+ +E++N KIL + + R
Sbjct: 498 DYIRKQTLANAER--------YFTPELKEMEN-------KILGAQEGLLRCETQVFQEIR 542
Query: 486 DHLLKAV-------NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMT 537
D LLK + AELD SLA VA N+Y+ P +T + ++ I NGRH V+++M
Sbjct: 543 DELLKEIPRVQQKAREVAELDAIYSLASVAITNHYVCPQITEDKIVQIHNGRHPVVEDMV 602
Query: 538 VDT-FIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+ FI ND I D+D R+ IITGPN +GKS +I+QVA+I L+ IGSFVPAD+A++G+
Sbjct: 603 GNQHFIGNDCTINDDDQRMLIITGPNMAGKSTFIRQVAIITLLAQIGSFVPADSASIGVV 662
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S + + QS+FM+++ +V +L+ AT++SL +LDE G+GT T DGI +
Sbjct: 663 DRIFTRVGASDDLASGQSTFMVEMTEVANILKNATNRSLVILDEIGRGTSTFDGISIAWA 722
Query: 648 TINYFVTCD-VPPKVLVCTH---LTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ Y D + K L TH LTEL L G S RLK D D
Sbjct: 723 VVEYLHNEDSIGAKTLFATHYHELTELETLKPGIKNFSIRLK--------------DTPD 768
Query: 702 -IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++FL +++PG A SYG+ A LAG P V +RA +L
Sbjct: 769 GVIFLRKIIPGPADQSYGIEVAKLAGFPVAVTRRAQEIL 807
>gi|359405902|ref|ZP_09198629.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
gi|357557252|gb|EHJ38804.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
Length = 878
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/622 (27%), Positives = 295/622 (47%), Gaps = 78/622 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++++LD +L++ Q+ + +G S+ ++++ TPMG R
Sbjct: 259 ITSLARIDADRYVRLDRFTIHSLELLQSMQD----------DGVSLLSVIDRTCTPMGGR 308
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ +N RL+ + F + ++ E L + DI I+ K SP
Sbjct: 309 LLRRWTIFPLRDVATINKRLDVVETFFRKPDFRQTVDEHLHRIGDIERIISKVAVGRVSP 368
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ LK I + N E+ S+ +Q+ L +
Sbjct: 369 REVVQLKYALGALKPIKAACLTNDSAEI---RSIGDQINLCE----------------AL 409
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL----EEVASLELVQLP 392
YE + + + + G ++ GF ELDELR I ++L EE A +Q
Sbjct: 410 YERIDRELQQDPPQLVAKGGVIATGFSPELDELRSISRGGRDYLLKIQEEEAQKTGIQSL 469
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
+ Y + GY + + D E ++ A ++ Y T +
Sbjct: 470 K---------VGYNNVFGYYLEVRNTYKDQVPQEWIRKQTLANAER--------YITEEL 512
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
++ + + +IL +E + +LV+ + + + N A LDC LS A A ++
Sbjct: 513 KQYEQKIMGADEQILVLETRLFTELVTDMQAYIPQIQADANIVARLDCLLSFAKTAEEHR 572
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIY 568
Y+RP++ + +L+I+ GRH + E + + ++PND +D + + I IITGPN +GKS
Sbjct: 573 YVRPVVEDDNVLEIRAGRHPVIETQLPVGEEYVPNDIELDTEQQQIMIITGPNMAGKSAL 632
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++Q ALI ++ +G FVPAD+A VG+ D S +++ +S+FM+++ + +L
Sbjct: 633 LRQTALITLMAQMGCFVPADSAHVGVVDKIFTRVGASDNISLGESTFMVEMTEASNILNN 692
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS 679
T +SL L DE G+GT T DGI + + Y + L TH E LNE + K+
Sbjct: 693 VTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHQNPKAQARTLFATHYHE-LNE--MEKN 749
Query: 680 -ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
ER+K Y +SV + ++FL +L+ G + S+G+H A +AG+P V+KRA +
Sbjct: 750 FERIKNYNVSVKELDGK------VIFLRKLMRGGSEHSFGIHVAEIAGMPRSVVKRAENI 803
Query: 739 LEAAQ-NNKHVERWSHENISAQ 759
L+ + +N V S I +Q
Sbjct: 804 LKQLEADNASVGVESARQIVSQ 825
>gi|7404405|sp|P73769.2|MUTS_SYNY3 RecName: Full=DNA mismatch repair protein MutS
Length = 878
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/650 (27%), Positives = 296/650 (45%), Gaps = 75/650 (11%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
R+ L M G + +RA+GGLL +E+ + + I + L FL
Sbjct: 251 RVKSLEGMGCEGLPLAIRAAGGLLEYIEDTQKAHV----------VPIQPLKTYGLTDFL 300
Query: 174 KLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LD L+I QT + S G S+ +++ T MG R LR W L+P+LDL
Sbjct: 301 VLDHQTRRNLEINQTVRDGSFHG--------SLLWALDRTSTTMGSRALRRWLLQPLLDL 352
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ + +R + I L L + L+ + D+ + + + + +A D S+
Sbjct: 353 KGIQARQDTIQELYHHPALRQDLRQLLRQIYDLERLTGRIGANT--ASARDVYGLASSLV 410
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L + ++ + G S L KA + EL + + V+ I N
Sbjct: 411 RLTDLAELAQEGHSPYL-------------KALQTVPPELEELGKYVLAHIVENPPLHIR 457
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G L+R G LDE+RQ E+ ++L EV E + +L + Y GY
Sbjct: 458 EGNLIRSGVNPTLDEMRQSLEDDNQWLANLEVTEREKTGIANLK-------VGYNKAFGY 510
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + K EQ + E + Y TP+ +E + + + +E
Sbjct: 511 YLSLPRSKS-----EQAPDNYIRKQTLVNEER---YITPELKERETRILTAQADLNQLEY 562
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP-LLDIQNGR 530
I ++ + + + + A +D LA VA Y RPI+ +EP L+DI+ GR
Sbjct: 563 EIFTEVRATVAEKAQPIRDVAKAVAAIDVLAGLAEVAVYQGYCRPIMQMEPGLIDIEAGR 622
Query: 531 H--VLQEMTVDTFIPNDTRIDND---GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
H V Q + F+ NDT++ +D + I+TGPN SGKS Y++QV LI ++ GSF+
Sbjct: 623 HPVVEQSLGAGFFVANDTQLGHDHWHPDLVILTGPNASGKSCYLRQVGLIQLMAQTGSFI 682
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA AT+ + D + QS+FM+++++ +L AT++SL LLDE G+GT
Sbjct: 683 PAKTATLSICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATAKSLVLLDEIGRGTA 742
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + ++ ++ ++ + + TH EL L E + + ++V
Sbjct: 743 TFDGLA-IAWSVAEYLAGEIQARTIFATHYHELNELASL--LENVANFQVTV------KE 793
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
E+I+FL+++ PG A SYG+ LAG+P+ VI RA V+ AQ KH
Sbjct: 794 LPEEIIFLHQVTPGGADKSYGIEAGRLAGLPSSVITRARQVM--AQIEKH 841
>gi|410671188|ref|YP_006923559.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
gi|409170316|gb|AFV24191.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
Length = 887
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 185/628 (29%), Positives = 307/628 (48%), Gaps = 77/628 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++F+ LDA L+I + + G + ++ ++++ TPMG RLL+ W L+P
Sbjct: 267 SEFMVLDAITLRNLEIVKNVR-------GEGSDS-TLLNVLDETRTPMGGRLLQKWLLKP 318
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF---NSPSFIYTASDWT 286
++ ++++N RL+A+S L + + L L YVKD+ ++ + NS A D
Sbjct: 319 LVSVDDINYRLDAVSQLLGNTLVRFDLRSHLSYVKDMERLVGRVLYGNS-----NARDLV 373
Query: 287 AFLKSICSLLH-VNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A +S+ ++ V+ + G SE L DIV + +S TEL + EL+ I
Sbjct: 374 ALRRSMEAVPQIVDSMRGCGKSELLD--------DIVSQLSSF--TELEELTELIGRAIV 423
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
G +++ G+ + LDELR + + ++ E E + K + V Y
Sbjct: 424 DEPPVSVRDGGMIKSGYNERLDELRGLSKSGKHWIAEFQQKERDRTG--IKSLKVG---Y 478
Query: 406 IHQIGYLMCIFEEKL----DDTTLEQLQGFEFAFSDMDGETKRLFYHTP--KTRELDNLL 459
GY + I + + DD +Q T ++TP K RE D L
Sbjct: 479 NKVFGYYLEITKANISQVPDDYIRKQTM------------TNAERFYTPQLKERESDILS 526
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
D K++ +E + ++ + + S L LD + A VA NNY+RP +T
Sbjct: 527 AD--EKMVALEYELLCEVNAVVASHSKQLQDTAATIGMLDVLANFAEVAANNNYIRPGIT 584
Query: 520 LEPLLDIQNGRHVLQEMTV-DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVF 577
+ L I++GRH + E V F+PNDT +D + + +ITGPN +GKS Y++Q+A+IV
Sbjct: 585 NDCKLLIRDGRHPVVESAVRGGFVPNDTDMDCQNNQFMLITGPNMAGKSTYMRQIAMIVI 644
Query: 578 LSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ GSFVP A++G+ D + + QS+FM+++ ++ +L AT +SL LL
Sbjct: 645 MAQAGSFVPVSHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPRSLVLL 704
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG + + Y + V + L TH +L G L +R+K + +
Sbjct: 705 DEIGRGTSTYDGYSIAKAVVEYIHSKGRVGVRSLFATHYHQLTEIAGNL---KRVKNFHI 761
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+V + +D+VFL ++VPG SYG+H A +AGVP V KRA +LE +N
Sbjct: 762 AV------KEEGDDLVFLRKIVPGATDKSYGIHVARIAGVPLSVTKRAREILEDIENESA 815
Query: 748 VERWSHENISAQDQQYKNA-VEKMLAFD 774
+ S + A + NA +++ FD
Sbjct: 816 I---SMNDTKAGKKHRNNAKYTQLILFD 840
>gi|404496284|ref|YP_006720390.1| DNA mismatch repair protein MutS [Geobacter metallireducens GS-15]
gi|418064991|ref|ZP_12702367.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
gi|123572094|sp|Q39VR6.1|MUTS_GEOMG RecName: Full=DNA mismatch repair protein MutS
gi|78193891|gb|ABB31658.1| DNA mismatch repair ATPase MutS-1 [Geobacter metallireducens GS-15]
gi|373563264|gb|EHP89465.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
Length = 872
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 281/596 (47%), Gaps = 64/596 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+FL LD L++ T + K S+ G++++ T MG R LR W P
Sbjct: 266 QEFLVLDEATRRNLELTAT--------LSEGKRRGSLLGLLDRTATAMGGRKLRQWINYP 317
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++ +E + R +A+ L A + E L+ V D+ + + + S A D A
Sbjct: 318 LVIVEKIKERQDAVGELANDPALRAGIREALEGVYDLERLNGRISLAS--SGAKDLVALK 375
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID---- 345
S+ + + + E + L E + D +++ A I GI+D
Sbjct: 376 ASLQRIPPLLSLLESTGTALLGELCK--GIDPMDEVAELIGR----------GIVDDPPF 423
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
V R G ++ +G+ ELDELR I E F+ + + E + + I Y
Sbjct: 424 VLRE-----GGIIADGYHAELDELRAISREGKGFIARLEAKEKARTGITSLK-----IRY 473
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + L + ++ A ++ + TP+ +E + + +
Sbjct: 474 NKVFGYYIEVTKTNLGSIPEDYIRRQTLANAER--------FITPELKEYEEKVLGAEER 525
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
I+++E ++ + + + + L + + A LD SLA VAH+ NY RP + L
Sbjct: 526 IVELEYSLFQQIRQSVAAEGERLARTADRLATLDVLASLADVAHERNYCRPGIDDGDTLS 585
Query: 526 IQNGRH-VLQEMTV-DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I GRH V++ + V + F+PND +DN + ++ IITGPN +GKS +++QVALIV ++ +G
Sbjct: 586 ISEGRHPVVEALNVSERFVPNDVLLDNGENQLVIITGPNMAGKSTFMRQVALIVLMAQLG 645
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA A +G+ D S ++ QS+FM+++ + +LR AT +SL +LDE G+
Sbjct: 646 SFVPATEARIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPKSLVVLDEIGR 705
Query: 635 GTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
GT T DG+ + Y T K L TH EL R K +V E
Sbjct: 706 GTSTFDGVSIAWAVAEYLHDTARCAAKTLFATHYHELTELAVT----RGKIKNCNVAVKE 761
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
N + ++FL ++V G A SYG+ A LAG+P EVI+RA +L + ++VE
Sbjct: 762 WN----DQVIFLRKIVEGGASHSYGIQVARLAGLPIEVIERAKEILHNLEKGEYVE 813
>gi|407958334|dbj|BAM51574.1| DNA mismatch repair protein MutS [Bacillus subtilis BEST7613]
Length = 898
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/650 (27%), Positives = 296/650 (45%), Gaps = 75/650 (11%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
R+ L M G + +RA+GGLL +E+ + + I + L FL
Sbjct: 271 RVKSLEGMGCEGLPLAIRAAGGLLEYIEDTQKAHV----------VPIQPLKTYGLTDFL 320
Query: 174 KLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LD L+I QT + S G S+ +++ T MG R LR W L+P+LDL
Sbjct: 321 VLDHQTRRNLEINQTVRDGSFHG--------SLLWALDRTSTTMGSRALRRWLLQPLLDL 372
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ + +R + I L L + L+ + D+ + + + + +A D S+
Sbjct: 373 KGIQARQDTIQELYHHPALRQDLRQLLRQIYDLERLTGRIGANT--ASARDVYGLASSLV 430
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L + ++ + G S L KA + EL + + V+ I N
Sbjct: 431 RLTDLAELAQEGHSPYL-------------KALQTVPPELEELGKYVLAHIVENPPLHIR 477
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G L+R G LDE+RQ E+ ++L EV E + +L + Y GY
Sbjct: 478 EGNLIRSGVNPTLDEMRQSLEDDNQWLANLEVTEREKTGIANLK-------VGYNKAFGY 530
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + K EQ + E + Y TP+ +E + + + +E
Sbjct: 531 YLSLPRSKS-----EQAPDNYIRKQTLVNEER---YITPELKERETRILTAQADLNQLEY 582
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP-LLDIQNGR 530
I ++ + + + + A +D LA VA Y RPI+ +EP L+DI+ GR
Sbjct: 583 EIFTEVRATVAEKAQPIRDVAKAVAAIDVLAGLAEVAVYQGYCRPIMQMEPGLIDIEAGR 642
Query: 531 H--VLQEMTVDTFIPNDTRIDND---GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
H V Q + F+ NDT++ +D + I+TGPN SGKS Y++QV LI ++ GSF+
Sbjct: 643 HPVVEQSLGAGFFVANDTQLGHDHWHPDLVILTGPNASGKSCYLRQVGLIQLMAQTGSFI 702
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA AT+ + D + QS+FM+++++ +L AT++SL LLDE G+GT
Sbjct: 703 PAKTATLSICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATAKSLVLLDEIGRGTA 762
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + ++ ++ ++ + + TH EL L E + + ++V
Sbjct: 763 TFDGLA-IAWSVAEYLAGEIQARTIFATHYHELNELASL--LENVANFQVTV------KE 813
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
E+I+FL+++ PG A SYG+ LAG+P+ VI RA V+ AQ KH
Sbjct: 814 LPEEIIFLHQVTPGGADKSYGIEAGRLAGLPSSVITRARQVM--AQIEKH 861
>gi|349576926|dbj|GAA22095.1| K7_Msh5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 901
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 288/609 (47%), Gaps = 67/609 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD AL IF T H + R FSVF + N+ + RR+L++W + P+ + +
Sbjct: 249 LDENTISALNIFPTAHKLGHDKMMR-NGFFSVFELFNQVSSDYPRRILKSWLINPLTNKK 307
Query: 235 NLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTASDWTAFLKS 291
+ +R + I L + + + L +++K D + + S S + T S +FL+
Sbjct: 308 RIETRYSIIRTLLDKQNAIIFSDLTQSIKRCPDAFGFINQLRSGKSTLGTWSKVASFLEK 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
++ + ++G E +L+ DI K + L V +ID + S++
Sbjct: 368 GIAIFQLVSSLKLGSDEG-----NILH-DIKNKVD---ISALKECLRKVETVIDFDTSRD 418
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVAS----LELVQLPHL-CK-----EMFVP 401
T + G + LDE R IY L L +VA L LP CK E V
Sbjct: 419 TKTLT-INTGVDNRLDECRNIYNHLEGILLDVARETQIFLLNTLPQEDCKTTKSLEKLVN 477
Query: 402 CIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
VYI Q+GYL+ I E LD + LQ E S ++ +++ + ELD
Sbjct: 478 A-VYIPQLGYLVTISVLMEPLLD--GIPNLQWEEIFRS-----SENIYFKNGRVLELDET 529
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
GDIY I D E I L I L +EL+ LS A V+ + NY P L
Sbjct: 530 YGDIYGAISDFEIEILFSLQEQILRRKTQLTAYNILLSELEILLSFAQVSAERNYAEPQL 589
Query: 519 TL-EPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINIITGPNYSGK 565
E +L+I NGRH L E +D +IPN T ID N GRI ++TG N SGK
Sbjct: 590 VEDECILEIINGRHALYETFLDNYIPNSTMIDGGLFSELSWCEQNKGRIIVVTGANASGK 649
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFMIDLHQVGMM 617
S+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF++D Q+
Sbjct: 650 SVYLTQNGLIVYLAQIGCFVPAERARIGIADKILTRIRTQETVYKTQSSFLLDSQQMAKS 709
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLP 677
L AT +SL L+DE+GKGT DG L G + + P+++ CTH EL NE L
Sbjct: 710 LSLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSEKCPRIIACTHFHELFNENVLT 769
Query: 678 KS-ERLKFYTMSVLRPE----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
+ + +K Y +L + + E I FL+++ G + S+G++CA + G
Sbjct: 770 EHIKGIKHYCTDILISQKYNLLETAHVGEDHESEGITFLFKVKEGISKQSFGIYCAKVCG 829
Query: 727 VPAEVIKRA 735
+ ++++RA
Sbjct: 830 LSRDIVERA 838
>gi|332654851|ref|ZP_08420593.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332516194|gb|EGJ45802.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 866
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/635 (28%), Positives = 308/635 (48%), Gaps = 80/635 (12%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
G V+A+GGLL L + + D I + + +F++LD TA + L+
Sbjct: 233 GDTAAVQATGGLLRYLYDTQKTDLGH----------IAAFSYYTTGQFMELDLTARQTLE 282
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + G+ K+G S+ +M+K TPMG RL+R W RP+L + R A+
Sbjct: 283 LTETLR-------GKEKKG-SLLWVMDKTRTPMGHRLIRGWMERPLLSPVQIARRQQAVG 334
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS---DWTAFLKSICSLLHVNKI 301
+ L TL+ V D+ ++ + +Y + D TA + L + ++
Sbjct: 335 DLVEDIITREELTLTLREVTDLERLIGRV-----VYGTAGGRDLTALATGLGKLPRIREL 389
Query: 302 FE---VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
+ +SL EQL L ++ E + E + G +
Sbjct: 390 LSPCSSALLQSLAEQLDDLP-ELRELLQRALVDEPPFSVR---------------EGKFI 433
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
REG+ +E+D LR + + + L ++ + Q K M V Y GY + + +
Sbjct: 434 REGYSEEVDRLRNVMDHGADMLADLEARTKEQTG--IKNMKVG---YNKVFGYYIEVAKS 488
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
+ + +G+ + ++ E Y + + ++L++ + K++ +E + +L
Sbjct: 489 QTNLVP----EGWVRKQTTVNSER----YISQELKDLEHTILSAQDKVVALEYQLFCELK 540
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMT 537
+C + K+ A++D S A VA NY P + +L+I GRH V+++M
Sbjct: 541 DTVCRHVTQVQKSAATVAQVDVLNSFATVAAAGNYCMPQVDNSSVLNIVEGRHPVVEKML 600
Query: 538 VDT-FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
D+ F+PNDT +D+ D IITGPN +GKS Y++QVALI ++ +GSFVPA +A +G+
Sbjct: 601 KDSLFVPNDTHMDDGDDLCAIITGPNMAGKSTYMRQVALITLMAQMGSFVPAKSAHIGVV 660
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S ++A QS+FM+++ +V +L+ AT +SL +LDE G+GT T DG+ +
Sbjct: 661 DRVFTRIGASDDLSAGQSTFMVEMTEVAQLLKNATRRSLLILDEIGRGTSTYDGMAIARS 720
Query: 648 TINYFV-TCDVPPKVLVCTHLTEL-LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFL 705
+ Y + K L TH EL + EG +P +K Y ++ + ++ ++FL
Sbjct: 721 VLEYCADKRRLGCKTLFATHYHELTVLEGEIPG---VKNYNIAAKKRKDQ------VIFL 771
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++V G A SYG+ A LAGVP VIKRA +L+
Sbjct: 772 RKIVRGGADQSYGIEVAQLAGVPDRVIKRAREILK 806
>gi|296188728|ref|ZP_06857115.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
gi|296046655|gb|EFG86102.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
Length = 903
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 174/624 (27%), Positives = 310/624 (49%), Gaps = 69/624 (11%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ +T + S G S+ +M++ T MG R LR W +P++
Sbjct: 261 YMAIDINSRRNLELTETLRDKSKKG--------SLLWVMDRTNTAMGGRQLRKWIEQPLI 312
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ ++ RL+++ L + + L E LK + DI ++ K +S + A + + S
Sbjct: 313 NSSSIKLRLDSVEELLNNLSVHEDLKEALKEIYDIERLVGKISSKNV--NAKELISLKGS 370
Query: 292 ICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
I + + K+ FE + ++ +L EL +YE++ I
Sbjct: 371 IKKIPIIKKMLSNFETTLLHNMGVKL----------------DELQDIYEILDKAIIDTP 414
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYI 406
S G L++EG+ E+DEL+ +++ E + E+ + L + Y
Sbjct: 415 SISLKEGNLIKEGYNGEVDELKLAKAHGKDWIASLENSEREITGIKSLK-------VGYN 467
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + ++ + L + + +R Y TP +E+++ + K+
Sbjct: 468 KVFGYYI-----EVTKSNLSSIPEGRYIRKQTLANAER--YITPSLKEMEDKILGAEEKL 520
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E I D+ I D + + +E+DC SLA +A +NNY +P ++ + + I
Sbjct: 521 INLEYDIFIDVRDKIEKQVDRMQETAKIISEIDCLSSLATIALENNYCKPEISSKEDICI 580
Query: 527 QNGRH-VLQEM-TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH V+++M + +FI NDT I+ +D ++ IITGPN +GKS Y++QVALIV ++ IGS
Sbjct: 581 EEGRHPVVEKMISSGSFISNDTVINTSDEQLLIITGPNMAGKSTYMRQVALIVLMAQIGS 640
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA A + + D S + A +S+FM+++ +V +L+ AT++SL LLDE G+G
Sbjct: 641 FVPAKKAVISVCDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATNKSLILLDEVGRG 700
Query: 636 TLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN 694
T T DG+ + I Y + + K L TH EL + E +K Y++SV +
Sbjct: 701 TSTYDGLSIAWSVIEYICSSKKLKCKTLFATHYHELTKLESII--EGVKNYSVSVKEIGS 758
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH----VER 750
DIVFL +++ G A SYG+ A LAG+P +VI+RA +L + + K V
Sbjct: 759 ------DIVFLRKIIRGGADQSYGIEVAKLAGLPDKVIERAKEILNSIETEKSSDIDVNE 812
Query: 751 WSHENISAQDQQYKNAVEKMLAFD 774
S+ NI + ++ ++ ++ D
Sbjct: 813 ISNNNIQVNKEHIAHSQKEYISVD 836
>gi|42518561|ref|NP_964491.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|48428289|sp|P61668.1|MUTS_LACJO RecName: Full=DNA mismatch repair protein MutS
gi|41582846|gb|AAS08457.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 857
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/589 (28%), Positives = 278/589 (47%), Gaps = 71/589 (12%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-----NSPSFIYTASDW 285
L + + R + L + ++LK V D+ + + N+ + A
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSL 363
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A + + +LL N L NF A I L +++L++ I
Sbjct: 364 GAIPEILNALLETNNP-------------HLQNF------AKQIDP-LKGIHDLIVNTIV 403
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCI 403
N G L+REG ++LD R ++L E+ S E+ + +L +
Sbjct: 404 DNPPLPTTEGGLIREGVSEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------V 456
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + ++ ++ T Y TP +E + L+ +
Sbjct: 457 GYNKVFGYYIEVTNSNKSKVPTDR-------YTRKQTLTNAERYITPDLKEHEALILEAE 509
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEP 522
K +E + L + + L K A LD + A V+ QNNY+RP +T +
Sbjct: 510 AKSTGLEYDLFVKLREDVKKYIPALQKLAKQIASLDVLTNFATVSEQNNYVRPNFVTDKQ 569
Query: 523 LLDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+++ NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++
Sbjct: 570 EINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTNIFLITGPNMSGKSTYMRQMALIAIMAQ 629
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE
Sbjct: 630 IGSFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEI 689
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLR 691
G+GT T DG+ L G + Y + V K L TH EL + + LK + V
Sbjct: 690 GRGTATYDGMALAGAIVKY-LHDKVGAKALFATHYHELTD-----LDQTLKHLKNIHVGA 743
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
E N ++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 744 TEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|254495018|ref|ZP_01053401.2| DNA mismatch repair protein MutS [Polaribacter sp. MED152]
gi|213690600|gb|EAQ42829.2| DNA mismatch repair protein MutS [Polaribacter sp. MED152]
Length = 860
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 281/560 (50%), Gaps = 57/560 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++K ++PMG RLL+ W P+ +++ + +R + FF+ S+E ++ LK +
Sbjct: 277 TLLDVIDKTISPMGGRLLKRWLALPLKNIDEIKNRHELVKFFIDSDEFSQTVTYQLKQIS 336
Query: 265 DIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
D+ ++ K SP I D LK+I + + + + ++L +QL D
Sbjct: 337 DLERLISKVATGKASPREIVLLKDS---LKAILPIKNEAEKSKNKAVQNLGKQLHTCE-D 392
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
++ K + + E +++N+ G + ELD+LR I +FL
Sbjct: 393 LISKISETLFDEAP---------VNINK------GNAIANNVHQELDDLRAISSSGKQFL 437
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+++ + E + I + + GY + + D + ++ ++
Sbjct: 438 DDMLTRETE-----ATGITSLKIAFNNVFGYYIEVRNTHKDKVPEQWIRKQTLVSAER-- 490
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y T + +E + + KI +E+ I L+ +I F D + + A++DC
Sbjct: 491 ------YITEELKEYETKILGAEEKIAKLEQEIFSKLLQYIIQFVDVVQENAQIIAKIDC 544
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVD-TFIPNDTRID-NDGRINI 556
LS +++A NNY+RPI+ L+I+NGRH + +++ +D T+I ND ++ N +I +
Sbjct: 545 LLSFSVLAVDNNYVRPIMDESTDLEIKNGRHPVIEKQLPIDQTYIANDVVLNRNQQQIIM 604
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN SGKS ++Q ALIV L+ +G +VPA A +G+ D S +++ +S+FM
Sbjct: 605 ITGPNMSGKSAILRQTALIVLLAQMGCYVPAQNAKIGIVDKIFTRVGASDNISMGESTFM 664
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++++ +L + +SL LLDE G+GT T DGI + + K L TH
Sbjct: 665 VEMNETASILNNVSERSLILLDEIGRGTSTYDGISIAWAISEFLHEHPTKAKTLFATHYH 724
Query: 669 ELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVP 728
E LNE ER+K + +SV E+N I+FL +LV G + S+G+H A LAG+P
Sbjct: 725 E-LNE-MTTTFERIKNFNVSVKELEDN------IIFLRKLVSGGSNHSFGIHVAKLAGMP 776
Query: 729 AEVIKRAAYVL-EAAQNNKH 747
VI RA +L + +NNK+
Sbjct: 777 NMVIHRANKILAQLEKNNKN 796
>gi|303236244|ref|ZP_07322840.1| DNA mismatch repair protein MutS [Prevotella disiens FB035-09AN]
gi|302483558|gb|EFL46557.1| DNA mismatch repair protein MutS [Prevotella disiens FB035-09AN]
Length = 888
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/600 (27%), Positives = 286/600 (47%), Gaps = 73/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K+++LD +L++ + ++G S+ ++++ +TPMG R
Sbjct: 267 ITSLTRIEEEKYVRLDRFTIRSLELVAPMQ----------EDGTSLLNVVDRSITPMGGR 316
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L W + P+ D++ +N RL + ++ + +++ L + D+ I+ K SP
Sbjct: 317 MLHRWLIFPLKDVKPINERLEIVEYYFREPDFRQCINDQLHRIGDLERIISKVAVGRVSP 376
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ TA +KS C + + +G EQL L C
Sbjct: 377 REVVQLKTALCAIQPMKSACLSTNNEALKRIG------EQLNL-----------C----- 414
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
A + E + I + + G ++ G+ ELDELR I + + L E+ E +
Sbjct: 415 ASIRERIEQEIKPDPPQLVNKGDVIATGYNAELDELRAIRDNGKQVLLEIQEKEAEKTG- 473
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 474 ----INSLKIGFNNVFGYYLEVRNTFKDKVPEDWIRKQTLAQAER--------YITPELK 521
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC LS A VA +N Y
Sbjct: 522 EYEAKILGADEKILALEARLFSELVQDMQEFIPQIQINANLIARLDCLLSFAKVAEENKY 581
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + +T++PND +DN+ +I +ITGPN +GKS +
Sbjct: 582 VRPVVDDSTIIDIKKGRHPVIETQLPLGETYVPNDVYLDNEQQQIMMITGPNMAGKSALL 641
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +GSFVPA+ A VGL D S +++ +S+FM+++ + +L
Sbjct: 642 RQTALIVLLAQVGSFVPAEGARVGLVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 701
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSE 680
T +SL L DE G+GT T DGI + + Y + L TH EL + K
Sbjct: 702 TPRSLILFDELGRGTSTYDGISIAWAIVEYLHEQPRASARTLFATHYHELNEMAKIFK-- 759
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R+K + +SV + I+FL +L G + S+G+H A +AG+P ++KRA VL+
Sbjct: 760 RIKNFNVSVKELDGK------IIFLRKLEKGGSEHSFGIHVADIAGMPKSIVKRANVVLK 813
>gi|373456284|ref|ZP_09548051.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
gi|371717948|gb|EHO39719.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
Length = 884
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 291/593 (49%), Gaps = 57/593 (9%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
V+L++++ LD + L+I ++ I ++ ++ +TPMG RL + W
Sbjct: 266 VNLSRYMVLDESTRRNLEISES--------ISGGGVRNTLLHFIDFTITPMGARLFKQWI 317
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
+P+LD+E +N RL+ +S + L L LK + D +L K + A D
Sbjct: 318 QQPLLDMEEINHRLDIVSELVGDAPLREQLAAELKQIFDTERLLGKIVTNR--ANARDVL 375
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+S+ ++ + I + ++L+ + +F I++ I + A V I + +
Sbjct: 376 NLGQSLKQIVPIKAIIDQTTCDTLKAHFQ--SFQILDSLTEKI--DRAIVENPPITLQE- 430
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G ++R G+ ELDELR I E+ ++L L Q + + Y
Sbjct: 431 --------GGIIRAGYHAELDELRAISEQGKDWL-----LAYQQRERERTGISTLKVNYN 477
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + D E ++ ++ + T + +E ++ + KI
Sbjct: 478 KVFGYYIEVTNVHKDKIPPEYVRKQTLVNAER--------FITQELKEWEDKILGAEEKI 529
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
++E + +++ + + + + AELDCFLSLA A +NNY+RP + L+I
Sbjct: 530 NELEYRLFQEIREEVGRYVEPIQLNSRLIAELDCFLSLAQAAIENNYVRPEIDDSRALEI 589
Query: 527 QNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIG 582
+ GRH + E T+ + FI ND +D D +I IITGPN +GKS +++QV LIV ++ IG
Sbjct: 590 REGRHPVVEKTLPPGEDFIANDAYLDPDSEQIWIITGPNMAGKSTFLRQVGLIVLMAQIG 649
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
S+VPA A +G+ D S ++ + +S+F++++++ +L AT +SL LLDE G+
Sbjct: 650 SYVPAAKARIGIVDRIFTRVGASDNLASGESTFLVEMNETANILNNATPRSLILLDEIGR 709
Query: 635 GTLTEDGIGLLGGTINY-FVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
GT T DG+ + Y + + K L TH EL L R+K Y ++V +
Sbjct: 710 GTSTFDGLSIAWAVAEYIYREPRLRCKTLFATHYHELTELALL--YPRIKNYNVAVEEWK 767
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ ++FL ++VPG + SYG++ A +AG+PA +I RA +L + N+
Sbjct: 768 DQ------VIFLRKIVPGGSDNSYGIYVAQMAGLPAPLIARAKEILTNLEANE 814
>gi|16330413|ref|NP_441141.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|383322154|ref|YP_005383007.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325323|ref|YP_005386176.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491207|ref|YP_005408883.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436474|ref|YP_005651198.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|451814571|ref|YP_007451023.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|1652903|dbj|BAA17821.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|339273506|dbj|BAK49993.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|359271473|dbj|BAL28992.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274643|dbj|BAL32161.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277813|dbj|BAL35330.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|451780540|gb|AGF51509.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
Length = 912
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 180/650 (27%), Positives = 296/650 (45%), Gaps = 75/650 (11%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFL 173
R+ L M G + +RA+GGLL +E+ + + I + L FL
Sbjct: 285 RVKSLEGMGCEGLPLAIRAAGGLLEYIEDTQKAHV----------VPIQPLKTYGLTDFL 334
Query: 174 KLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LD L+I QT + S G S+ +++ T MG R LR W L+P+LDL
Sbjct: 335 VLDHQTRRNLEINQTVRDGSFHG--------SLLWALDRTSTTMGSRALRRWLLQPLLDL 386
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ + +R + I L L + L+ + D+ + + + + +A D S+
Sbjct: 387 KGIQARQDTIQELYHHPALRQDLRQLLRQIYDLERLTGRIGANT--ASARDVYGLASSLV 444
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L + ++ + G S L KA + EL + + V+ I N
Sbjct: 445 RLTDLAELAQEGHSPYL-------------KALQTVPPELEELGKYVLAHIVENPPLHIR 491
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G L+R G LDE+RQ E+ ++L EV E + +L + Y GY
Sbjct: 492 EGNLIRSGVNPTLDEMRQSLEDDNQWLANLEVTEREKTGIANLK-------VGYNKAFGY 544
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + K EQ + E + Y TP+ +E + + + +E
Sbjct: 545 YLSLPRSKS-----EQAPDNYIRKQTLVNEER---YITPELKERETRILTAQADLNQLEY 596
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP-LLDIQNGR 530
I ++ + + + + A +D LA VA Y RPI+ +EP L+DI+ GR
Sbjct: 597 EIFTEVRATVAEKAQPIRDVAKAVAAIDVLAGLAEVAVYQGYCRPIMQMEPGLIDIEAGR 656
Query: 531 H--VLQEMTVDTFIPNDTRIDND---GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
H V Q + F+ NDT++ +D + I+TGPN SGKS Y++QV LI ++ GSF+
Sbjct: 657 HPVVEQSLGAGFFVANDTQLGHDHWHPDLVILTGPNASGKSCYLRQVGLIQLMAQTGSFI 716
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA AT+ + D + QS+FM+++++ +L AT++SL LLDE G+GT
Sbjct: 717 PAKTATLSICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATAKSLVLLDEIGRGTA 776
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + ++ ++ ++ + + TH EL L E + + ++V
Sbjct: 777 TFDGLA-IAWSVAEYLAGEIQARTIFATHYHELNELASL--LENVANFQVTV------KE 827
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
E+I+FL+++ PG A SYG+ LAG+P+ VI RA V+ AQ KH
Sbjct: 828 LPEEIIFLHQVTPGGADKSYGIEAGRLAGLPSSVITRARQVM--AQIEKH 875
>gi|317472765|ref|ZP_07932077.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
gi|316899757|gb|EFV21759.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
Length = 872
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 175/625 (28%), Positives = 297/625 (47%), Gaps = 61/625 (9%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
SV ++++ +D+++ L++ +T + G S+ G+++K T MG RLL
Sbjct: 257 SVSPYETSEYMIIDSSSRRNLELCETLRDKKKKG--------SLLGVLDKTKTAMGARLL 308
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA 282
R+ +P++D + R +A++ + E L V D+ ++ K + +
Sbjct: 309 RSMIEQPLIDRVKIEERYDALTSLTKQAIAREEIREYLNPVYDLERLMTKVSYQTI--NP 366
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D A S+ L + I E +SL LR + D +E A + E A + E I
Sbjct: 367 RDMIALKVSLQWLPPIKTILE-ECGDSLLSGLRE-DLDTLEDVAGLL--EDAILEEPSIA 422
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
+ + G ++++GF +++D+L++ + ++L ++L + +
Sbjct: 423 VKE---------GGIIKDGFSEQIDQLKRAKTDGKQWL-----MQLEERERRATGIKTLK 468
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
+ + GY + + D ++ S+ Y T + +L + +
Sbjct: 469 VKFNKVFGYYLDVTNSYKDKVPEHYIRKQTLTNSER--------YTTEELNKLADTILGA 520
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
++ +E + + + + K A LD SLA VA QN Y+RP L +
Sbjct: 521 EDRLCALEYETFASIRETLAGEMERIKKTAGVIAYLDVLCSLACVAEQNGYVRPKLNTKG 580
Query: 523 LLDIQNGRH--VLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLS 579
L+DI+ GRH V Q M+ D FI NDT +D+ R++IITGPN +GKS Y++Q ALIV ++
Sbjct: 581 LIDIKEGRHPVVEQMMSNDMFISNDTYLDSKRHRVSIITGPNMAGKSTYMRQSALIVLMA 640
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +G+ D S + + QS+FM+++ +V +LR AT SL +LDE
Sbjct: 641 QIGSFVPAQKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATKDSLLILDE 700
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DG+ + + Y + K L TH EL EG K + Y ++V
Sbjct: 701 IGRGTSTYDGLSIAWAVVEYISNPKLLGAKTLFATHYHELTELEG---KIGSVNNYCIAV 757
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+N IVFL ++V G A SYG+ A LAGVP VI+RA ++ ++ V
Sbjct: 758 KEQGDN------IVFLRKIVKGGADKSYGIQVAKLAGVPDMVIQRAKEIVSELSDSDIVS 811
Query: 750 RWSHENISAQDQQ---YKNAVEKML 771
+ +S++ QQ + N E M+
Sbjct: 812 QAQKIQVSSEPQQLSLFANDSEPMM 836
>gi|385802864|ref|YP_005839264.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi C23]
gi|339728356|emb|CCC39502.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi C23]
Length = 934
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 210/753 (27%), Positives = 346/753 (45%), Gaps = 101/753 (13%)
Query: 57 STKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
+ ++ + F+ L+ DGT TV +++ F+ +A H L T D L+I+
Sbjct: 179 TVRNADDFIRRLR--DGTD--ATVSSFETAAFALGRARHILSEQFGTTAIDSLNIE---- 230
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLD 176
++V ++A+G +L ++ E A+IT + + + L LD
Sbjct: 231 ---------TDVAIQAAGAILTYID--------ETDTGVRAAIT--RLQPLDSDTHLALD 271
Query: 177 ATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENL 236
T L++ +T H G G ++ G ++ T G R LR W +RP +
Sbjct: 272 TTTRRNLELTET-MHGDRGGDG------TLLGTIDHTATSAGHRQLREWIMRPQRVQTEI 324
Query: 237 NSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLL 296
RL+ I + + + ETL D+ + + I +D T L+ I L
Sbjct: 325 TRRLDCIEALVDAPLARERIAETLNGSYDLERLAARC-----ISERADATDLLR-IRETL 378
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY--ELVIGIIDVNRSKEKGY 354
+ + I+ES+ + L+ + + T + V EL ++D K
Sbjct: 379 EILPTLDEVITESILSESPLM------QVVTRPTEDTVKVVRDELTAALVD-EPPKTIRD 431
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELV--QLPHLCKEMFVPCIVYIHQIGYL 412
G L + G+ ELD LR+ +E E+++++A E L HL + YI Q+G
Sbjct: 432 GGLFQYGYDAELDSLRERHETAQEWMDKLAQRETETHNLNHLSVDRNKTDGHYI-QVGKS 490
Query: 413 MC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ + E + TL+ + F+ +D E +R ++R +ME
Sbjct: 491 VADQVPEHYREIKTLKNSKRFK---TDELAERERDILRLEESRG-------------EME 534
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ +L I ++ L AE+D SLA A +N++ RP L + +DI+ GR
Sbjct: 535 YELFCELREQIADYAAMLQTVGQVIAEIDALHSLATHAVENDWTRPTLRADHTVDIEAGR 594
Query: 531 HVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
H + E T + F+PND +++++ ++TGPN SGKS Y++QVALI L+H GSFVPA AA
Sbjct: 595 HPVVEQTTE-FVPNDLQLEDERNFLLVTGPNMSGKSTYLRQVALITLLAHAGSFVPAAAA 653
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
T+G D + +S+FM+++ ++ +L A+S+SL +LDE G+GT T DGI
Sbjct: 654 TIGAVDGIYTRVGALDELAQGRSTFMVEMQELSKILHSASSESLVILDEVGRGTATYDGI 713
Query: 643 GLLGGTINYFVTCD--VP-PKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLRPENNSTD 698
+ Y P P+VL TH EL ++R+ + V E N
Sbjct: 714 SIAWAATEYLSAAQSTAPSPRVLFATHYHELTT-----LADRITGVSNVHVAAEERNG-- 766
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK--HVERWSHENI 756
D+ FL + G A SYG+H A LAGVP V+ RA VL + ++ VE +H +
Sbjct: 767 --DVTFLRTVESGPADRSYGIHVAELAGVPDPVLTRARDVLSTLRADEAIEVETQNHADT 824
Query: 757 SAQDQQY------KNA-VEKMLAFDVLKGDLRL 782
S +DQ+ K+A + + FDV GD+R+
Sbjct: 825 SKRDQEENMTGGDKSAETTQQVVFDVNSGDIRV 857
>gi|386392603|ref|ZP_10077384.1| DNA mismatch repair protein MutS [Desulfovibrio sp. U5L]
gi|385733481|gb|EIG53679.1| DNA mismatch repair protein MutS [Desulfovibrio sp. U5L]
Length = 880
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 295/647 (45%), Gaps = 94/647 (14%)
Query: 120 SMMDMGSEVQ-VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+ +D+G + Q VRA G LL L + +E G+ S V+L + + LD
Sbjct: 218 AALDLGDKPQLVRAMGALLTYLA------ATQMRELGHLS----PFRPVNLGRHMLLDEV 267
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
+ L+IF+ + G+G +++ ++++ +TPMG RLL + +P LDL +
Sbjct: 268 TEKNLEIFR--RLDGGKGVG------TLWHVLDRTMTPMGGRLLESRLRQPWLDLGPILE 319
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLL 296
A++ + E L E L V D L++ + F+ A+ D+TA +S+ +L
Sbjct: 320 TQAAVADLVTDEGRRTGLREALSGVYD----LERLTTRIFLNRAAPRDFTALRQSLGALP 375
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
+ ++ L +FD +E A+S ++ L L + G
Sbjct: 376 RLRELASTDDQAPKAVAELLADFDALEDASSLLSGALVDSPPLAVT-----------EGG 424
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF 416
L R G+ ELDEL ++ E +E L +E C + ++GY
Sbjct: 425 LFRPGYHPELDELMELTEHGEARIE-----------ALLQEEREACNLPRLKLGY----- 468
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----------YHTPKTRELDNLLGDIYHK 465
++ G+ F S G F Y TP ++L+ L K
Sbjct: 469 ---------NRVFGYYFELSKSAGSPPGHFERRQTLANCERYVTPALKDLEEKLLSAADK 519
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
+E + DL + + D ++ A LD + LA A + RP L + +
Sbjct: 520 RKTLEYNLFLDLRAEVAGLRDRIMGTAARVARLDVWQGLAEAAVIGEWTRPELRQDLGIT 579
Query: 526 IQNGRHVLQEMT--VDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
I+ GRH + E + +IPND +D+ R+ +ITGPN +GKS ++Q ALI L+ IGS
Sbjct: 580 IRAGRHPVIEAAQGIGNYIPNDVAVDDAARLLLITGPNMAGKSTVLRQTALIAILAQIGS 639
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA A +GL D S ++ QS+FM+++ + +LRQA +SL +LDE G+G
Sbjct: 640 FVPATQAVIGLVDRVFCRVGASDNLARGQSTFMVEMMETARILRQAGKRSLVILDEIGRG 699
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKV--LVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
T T DG+ L + + V L TH EL EG LP L+ + ++V
Sbjct: 700 TATFDGLALAWAVVEDLAGREGGQGVRTLFATHYHELTALEGRLPG---LRNFNIAVKEW 756
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ DI+FL RL+PG A SYG+ A LAGVP V+KRA +L
Sbjct: 757 KG------DIIFLRRLLPGPADRSYGVEVARLAGVPRNVVKRARELL 797
>gi|167771419|ref|ZP_02443472.1| hypothetical protein ANACOL_02785 [Anaerotruncus colihominis DSM
17241]
gi|167666059|gb|EDS10189.1| DNA mismatch repair protein MutS [Anaerotruncus colihominis DSM
17241]
Length = 871
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 205/760 (26%), Positives = 345/760 (45%), Gaps = 90/760 (11%)
Query: 4 YMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEES 63
Y+ACIL G++ DSS QL V + D+ + +++ + +II+ +++
Sbjct: 130 YIACILFDQGWGLACADSSTGQLFVSQFAADAQGE--VVNELGRYCPSEIIFNEGILDQT 187
Query: 64 FLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMD 123
++A + A L + F QA LI + L +
Sbjct: 188 EVTAFIQKKLHCVA---DLCDNDRFD-PQAAEDLIARHFSKPSGALGLD----------- 232
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEAL 183
G + RA G LLA L E ++ G IT + V+ + + LD TA L
Sbjct: 233 -GRPLASRALGALLAYL--------YETQQKGLERIT--DIAYVNPEQSMALDLTARRNL 281
Query: 184 QIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI 243
++ QT + G ++ ++++ T MG+RL+R W +P+++ +N RLNA+
Sbjct: 282 ELTQTMRTGEKRG--------TLLWVLDRTKTAMGKRLMRAWLDKPLVNPAVINKRLNAV 333
Query: 244 SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF--LKSICSLLHVNKI 301
L L ++L V D+ ++ + IY ++ + L+ C + K
Sbjct: 334 EELFSDTMLRCDLIDSLSGVFDLERLMTRI-----IYGSASPREYKALEGACRKMPALKA 388
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
G + + + R D +E + + A V E + D G ++REG
Sbjct: 389 RMEGCASAYLCEARDA-LDPLEDVSDLLAR--AIVDEPPAAVKD---------GGVIREG 436
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
+ LDELR + + + L + + E + K M I Y GY + + + L
Sbjct: 437 YSPALDELRALIHDSKKLLVGIETQEKEKTG--IKNMK---IGYNRVFGYYIEVSKSNLG 491
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
++ A + Y T + ++L+ + +I +E + + +
Sbjct: 492 LVPDTYIRKQTLANCER--------YITQELKQLEEKILSAGERIATLENETFEAVRAAV 543
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-- 539
+ + A LD + SLA VA N Y RP + L + I++GRH + E +D
Sbjct: 544 SAQLHRVQATASAVARLDVYCSLAAVASANGYCRPDVGLSDGILIRDGRHPVVEQLMDGA 603
Query: 540 TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
F+ NDT +D + +I IITGPN +GKS Y++Q ALIV ++ IGSFVPA +A +G+ D
Sbjct: 604 PFVSNDTTLDCGENQIAIITGPNMAGKSTYMRQTALIVLMAQIGSFVPAASACIGVVDGI 663
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S + + QS+FM+++ +V +++QATS+SL +LDE G+GT T DG+ + +
Sbjct: 664 YTRVGASDDLASGQSTFMVEMTEVAQIMKQATSKSLLILDEIGRGTSTFDGMSIARAVLE 723
Query: 651 YFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
Y V K L TH EL E L +K Y ++ + + +++FL R+
Sbjct: 724 YIADKKRVGAKTLFATHYHELTALEDTL---SNVKNYNIACKKRGD------ELIFLRRI 774
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
VPG A SYG+ + LAGVP +I+RA VLE + + V
Sbjct: 775 VPGGADDSYGIEVSKLAGVPDWIIRRARQVLEQLEQGREV 814
>gi|420155624|ref|ZP_14662482.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
gi|394758853|gb|EJF41689.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
Length = 871
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 170/607 (28%), Positives = 295/607 (48%), Gaps = 70/607 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+D++ S ++F+ LD +A L++ +T + G++K G S+ +++K T MG+R
Sbjct: 259 MDTIEMYSGSQFMGLDLSARRNLELLETMR-------GKSKRG-SLLWVLDKTKTAMGKR 310
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+R W RP+L+ + R NA+ ++ E L + D+ ++ + +Y
Sbjct: 311 LIRVWIERPLLNPAQILRRQNAVEELSMDSMFRDAVAEQLSGIHDLERLMTRI-----VY 365
Query: 281 TASDWTAFLKSICSLLHVNKIFEV-----GISESLREQLRLLNFDIVEKAASCITTELAY 335
+++ L+S+C+ L +++ E+ G+S +L ++R D +E A+ I E A
Sbjct: 366 GSANARE-LRSLCAAL--SRLPELKQLLGGVSSALLREIRE-KIDPLEDVAALI--ESAI 419
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPH 393
V E I + G ++R G+ +ELDELR E + E E +P
Sbjct: 420 VDEPPFSIRE---------GGMIRPGYHEELDELRTDMGSGKEIIAQLEAGEREKTGIPK 470
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L + Y GY + + D E ++ + + TP +
Sbjct: 471 LK-------VGYNRVFGYYIEVSNSYRDKVPDEYIRKQTLTNCER--------FITPDLK 515
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+L+ + + K + +E + + + + + + A+LD S A V+ N+Y
Sbjct: 516 QLEGRILGAHEKSVQLETQLFEQVRAEAASQLERVQATASAVAQLDVLTSFAAVSVANSY 575
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDND-GRINIITGPNYSGKSIYIK 570
RP + L + ++ RH + E +D F+PND +D + R+ IITGPN +GKS Y++
Sbjct: 576 QRPEVNLSGKIILKESRHPVVEQMLDGAPFVPNDVELDQEENRVAIITGPNMAGKSTYMR 635
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALIV ++ IG FVPA +A +G+ D S M + QS+FM+++ +V +L+ AT
Sbjct: 636 QIALIVLMAQIGCFVPAQSAEIGVVDAIFTRVGASDDMASGQSTFMVEMTEVADILKNAT 695
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSER 681
S+SL +LDE G+GT T DG+ + + + + K L TH EL L
Sbjct: 696 SRSLLILDEIGRGTSTFDGMSIARAVLEHVADKHSLGAKALFATHYHELTVLEELVSG-- 753
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+K + ++V + +DI FL R+V G A S+G+ A LAGVP V+ RA VL
Sbjct: 754 VKNFNIAVKK------RGDDITFLRRIVRGGADDSFGIEVAKLAGVPNSVVNRAKQVLRE 807
Query: 742 AQNNKHV 748
++ + V
Sbjct: 808 LESGRPV 814
>gi|425444955|ref|ZP_18824995.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
gi|389735159|emb|CCI01290.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
Length = 882
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 199/769 (25%), Positives = 335/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSVSEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ +E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNKLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAGLAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|288928738|ref|ZP_06422584.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 317
str. F0108]
gi|288329722|gb|EFC68307.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 317
str. F0108]
Length = 874
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 176/606 (29%), Positives = 290/606 (47%), Gaps = 75/606 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + +++++LD +L++ Q + ++G S+ ++++ VT MG R
Sbjct: 255 VTSLALIEEDRYVRLDKFTIRSLELIQPMQ----------EDGASLLDVVDRTVTAMGGR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ +++ + RL+ + + E L E L + D+ I+ K SP
Sbjct: 305 LLRRWLVFPLKEVKPIEQRLDVVDYIFRYPEFRTLLDEQLHRIGDLERIISKVAVGRVSP 364
Query: 277 -SFIYTASDWTAF--LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + A LK C I ++G +L E LR I E+
Sbjct: 365 REMVQLKNALLAIQPLKIACLEADNETIRQIGEQMNLCESLR-----------DRIENEI 413
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
LV VNR G ++ EGF ELDELR I +FL +++ Q
Sbjct: 414 QPDPPLV-----VNR------GNVIAEGFSPELDELRNISRGGRDFL-----IDIQQREA 457
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y + GY + + D E ++ A ++ Y T + +
Sbjct: 458 EATGISSLKIGYNNVFGYYLEVRNTYKDKVPEEWVRKQTLAQAER--------YITQELK 509
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KI +E + +LV+ F + N A LDC LS A A +N Y
Sbjct: 510 EYEERILGADEKIQSLEERLFNELVTATQEFIPQIQINANVVARLDCLLSFAKTAEENRY 569
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP++ LDI+ GRH + E + + ++PND ++D + +I IITGPN +GKS +
Sbjct: 570 VRPVIEDSDALDIRQGRHPVIETQLPLGEHYVPNDIQLDTERQQIIIITGPNMAGKSALL 629
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IGSFVPA++A VGL D S ++ +S+FM+++ + +L
Sbjct: 630 RQTALIVLLAQIGSFVPAESARVGLVDKIFTRVGASDNIAQGESTFMVEMTEASNILNNV 689
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS- 679
+ +SL L DE G+GT T DGI + + Y + L TH E LNE + K+
Sbjct: 690 SPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFATHYHE-LNE--MEKNF 746
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K + +SV E N ++F+ RL G + S+G+H A +AG+P ++KRA VL
Sbjct: 747 KRIKNFNVSV--KELNGK----VIFMRRLERGGSEHSFGIHVADIAGMPKSIVKRANTVL 800
Query: 740 EAAQNN 745
+ +N+
Sbjct: 801 KQLEND 806
>gi|448543491|ref|ZP_21625045.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-646]
gi|448550583|ref|ZP_21628886.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-645]
gi|448559187|ref|ZP_21633439.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-644]
gi|445706214|gb|ELZ58097.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-646]
gi|445711088|gb|ELZ62882.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-645]
gi|445711557|gb|ELZ63348.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-644]
Length = 924
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 209/774 (27%), Positives = 350/774 (45%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P + +
Sbjct: 117 QFLAAVVTGGDGVGLAFADITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPDL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFSAEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELIET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L R +A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRHDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASELLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + ++ + ++E + R AA+ + T+LA + + K
Sbjct: 372 LADAIEGTELADSPLAEVVSRPDR--------DAAADLRTDLADA-------LAEDPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L + G+ DELD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFQTGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRF---------VTEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + +L + ++ L AE+D SLA A N + RP LT L
Sbjct: 524 ELFE-------ELRERVARHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTDAGAL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND R+D++ I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLRMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|425455709|ref|ZP_18835422.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
gi|389803365|emb|CCI17705.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
Length = 882
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 201/774 (25%), Positives = 336/774 (43%), Gaps = 117/774 (15%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----YHTPKTRELDNLLGDIYHKILD 468
+ K D F+ D K+ Y T + +E +N++ ++
Sbjct: 518 SLPRSKAD-------------FAPKDYVRKQTLVNEERYITTELKEKENIILTAVDELNK 564
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I DL + FS + + A LD LA +A Y RP + L+DI++
Sbjct: 565 LEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAGLAEIAVYQGYCRPEIADGRLIDIKD 624
Query: 529 GRH--VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHI 581
GRH V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+
Sbjct: 625 GRHPVVEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQT 684
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA +A + + D + QS+FM+++++ +L AT +SL LLDE G
Sbjct: 685 GSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATERSLVLLDEIG 744
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + Y T + + + TH EL + E + Y ++V
Sbjct: 745 RGTATFDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELP 801
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ +IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 802 H------EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|171680309|ref|XP_001905100.1| hypothetical protein [Podospora anserina S mat+]
gi|170939781|emb|CAP65007.1| unnamed protein product [Podospora anserina S mat+]
Length = 873
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 168/580 (28%), Positives = 271/580 (46%), Gaps = 81/580 (13%)
Query: 199 RAKEGFSVFGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
RAKE SV ++ T G++ +R LRP L+L+ ++ R + I L E
Sbjct: 229 RAKENLSVADLLASLASTTQGKQKVRQMLLRPSLNLDVIHQRQSTIHMMLDPE------- 281
Query: 258 ETLKYVKDIPHILKKFNSPSFIY----------------TASDWTAFLKSICSLLHVNKI 301
+ VK + +LK+ SP + DW A ++ +V+
Sbjct: 282 -NVSIVKSMRKLLKRLKSPKTLLLHVKKGVDRVRGHLSLRMGDWKAVVRFATVAANVH-- 338
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTE-LAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+++ +R +I+ K I + + ++ D SK+ T++
Sbjct: 339 ------QAVTSLVRTSGLEIISKICDTIDPRPFLLLADKIMRTFDFEASKDSQR-TIILS 391
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL 420
G LD+LRQ E+ + L ++ + P + + C V + Q G+L+ + +
Sbjct: 392 GASPGLDQLRQELAEVCDMLPDIRDNIAREAPRWANKHILHCTV-MEQSGFLIGVAIKP- 449
Query: 421 DDTTLEQLQGFEFAFSDMDGETKRLF-------YHTPKTRELDNLLGDIYHKILDMERAI 473
DT + G + +D E + +F Y +LD+ GD+ I + E +
Sbjct: 450 -DTGV----GVYYGHDLLDDEWELVFVTEGVAYYKNKLMHDLDSQYGDLPSYITEEEMLL 504
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L H+ +L A ELD +LA A + N++ P +T ++DI +GRH L
Sbjct: 505 VMELSGHVREQEKAILAASEIYGELDSLSALASAAEKYNWVAPTMTTSNIIDIIDGRHPL 564
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
QE+ V +FIPN+ KS+Y+KQVALIV L+H+GSFVPA AT+G
Sbjct: 565 QELVVPSFIPNNC------------------KSVYMKQVALIVQLAHVGSFVPAGRATIG 606
Query: 594 LTD---SKHMTAE-----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
LTD ++ +T E QS+FMID+ Q L AT +SL ++DEFGKGT +G LL
Sbjct: 607 LTDRILTRILTRETVLDDQSAFMIDIKQAAFALNFATKRSLLVVDEFGKGTTASNGAALL 666
Query: 646 GGTINYFVTCDVP--PKVLVCTHLTELLNEGCLP--KSERLKFYTMSVLRPENNSTDVED 701
+++F+ PKVL TH E+ G L + + L M V R + +ED
Sbjct: 667 ASYLSHFIELGKSQQPKVLAATHFHEVFENGLLDGYQEDDLALAHMDV-RLNLGADAIED 725
Query: 702 -IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ +L+RL+PG S G+ CA + G+PA ++ RA ++E
Sbjct: 726 QVTYLHRLLPGRGPSSLGIKCAEMRGIPARILNRADEIVE 765
>gi|170076810|ref|YP_001733448.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
gi|169884479|gb|ACA98192.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
Length = 881
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 181/636 (28%), Positives = 291/636 (45%), Gaps = 79/636 (12%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNA-SITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
VRA+GGLLA +E E+ A + +S+ S++ FL+LD L+I QT
Sbjct: 272 VRAAGGLLAYVE-----------ETQQAYKVPFESLKTYSIDAFLQLDHQTRRNLEITQT 320
Query: 189 DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC 248
+ S G S+ ++ T MG R LR W L+P+LD + + RL++++ +
Sbjct: 321 VRDGSFYG--------SLLWALDVTCTNMGGRALRRWLLQPLLDPKAIAKRLDSVAELVE 372
Query: 249 SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISE 308
+ L + + LK + D+ I + S S A D A +S+ L ++ ++ G S
Sbjct: 373 NTNLRQDIRQLLKQIYDLERIAGRIGSGSA--NARDLYALAESLTKLTYLAELATEGRSP 430
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L +A EL + + V+ + + G L+R+G + LD
Sbjct: 431 YL-------------QAVKDFPPELEALGQHVLQYLVDSPPIHIKEGGLIRDGVDENLDF 477
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL 428
LR+ E E+L A+LE+ + + Y GY + + + D E L
Sbjct: 478 LRRSQVEDREWL---ANLEVTERERTGVSKLK--VGYNKTFGYYISLPRSQADKAPDEYL 532
Query: 429 QGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHL 488
+ A + Y TP+ +E ++ + I +E I L + + +D +
Sbjct: 533 RKQTLANEER--------YITPELKERESRILTAKDDICSLEYEIFTTLRAEVAEHTDQI 584
Query: 489 LKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDT 546
A LD S A A Y RP +T E L+I+ GRH V + + + F+PN T
Sbjct: 585 RTTAKAIAALDVLTSFAETAVYQGYCRPEITTEKTLEIEAGRHPVVEKSLGMGLFVPNST 644
Query: 547 RIDNDGRIN-------IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS-- 597
+ GR I+TGPN SGKS Y++Q LI ++ +GSFVPA +A + + D
Sbjct: 645 YL---GRTQNSYPDLIILTGPNASGKSCYLRQTGLIQLMAQVGSFVPAQSAVIPICDRIF 701
Query: 598 ------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
+ QS+FM+++++ +L AT +SL L+DE G+GT T DG+ + Y
Sbjct: 702 TRVGAVDDLATGQSTFMVEMNETANILNHATEKSLVLIDEIGRGTATFDGLSIAWSVSEY 761
Query: 652 FVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
T ++ K + TH EL L E + Y ++V E+I+FL+++ PG
Sbjct: 762 LAT-EIKAKTIFATHYHELNELASL--LENVANYQVTV------QEMPEEIIFLHQVRPG 812
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
A SYG+ LAG+P VI+RA V+ Q KH
Sbjct: 813 GADRSYGIEAGRLAGLPKSVIQRAKQVM--TQIEKH 846
>gi|395645811|ref|ZP_10433671.1| DNA mismatch repair protein mutS [Methanofollis liminatans DSM
4140]
gi|395442551|gb|EJG07308.1| DNA mismatch repair protein mutS [Methanofollis liminatans DSM
4140]
Length = 869
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 283/585 (48%), Gaps = 67/585 (11%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
+ LDA L+I +T + G KEG ++ ++++ T MG R LR+ + P++
Sbjct: 269 MMLDAITLRNLEITETIR-------GEGKEG-TLIHVLDRTRTAMGSRTLRSHLVNPLIS 320
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
+++RL+A+ + + + L + LK DI I + + T D S+
Sbjct: 321 AARIDARLDAVEYLCQNTAVRTDLRDLLKQCADIERIAGRIAYGN--ATPRDLVTLGASL 378
Query: 293 CSLLHVNKIFEVGISESLREQL-RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + +F E + + L RL +F A V +L+ I +
Sbjct: 379 GCVAGIRGLFPEEAPEEITDALGRLGDF--------------AGVIDLIDRAIADDPPAT 424
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G +REG+ ELDEL ++ ++ E E + + + Y GY
Sbjct: 425 LKNGGAIREGYSAELDELHRLSGSGRTWIAEFQQTERERTGIRSLK-----VKYNRVFGY 479
Query: 412 LMCIFEEKL----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
+ I + L DD Q + +GE + TP +E + L+ ++L
Sbjct: 480 TIEITKPNLHLVPDDYDRRQ--------TTANGER----FTTPALKEKEALIASADERLL 527
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
+E + +L+ + + LD +LA VA +N Y+RP L I+
Sbjct: 528 SLEAELFANLLGTLAASVAAFQETARAVGVLDLHAALADVALRNAYVRPELDDGLKTVIR 587
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+GRH V++E T TFIPNDT +D++G +I IITG N +GKS Y++ VALI ++ +GSFV
Sbjct: 588 DGRHPVVEEKTAGTFIPNDTLLDSEGDQILIITGANMAGKSTYMRAVALITVMAQMGSFV 647
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A++GL D S +++ +S+FM+++ ++ +L T +SL +LDE G+GT
Sbjct: 648 PASYASIGLVDRVFTRVGASDDLSSGRSTFMVEMQELANILNNVTERSLVILDEIGRGTS 707
Query: 638 TEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG + + Y T P+ L TH +L++ EG L +R+K Y +V E
Sbjct: 708 TIDGYSIAKAVLEYLHGTRGKGPRTLFATHFHQLIDVEGSL---KRVKNYHFAV--KETG 762
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
S D+VFL +++PG SYG+H A LAGVPA+V +RA +L+
Sbjct: 763 S----DVVFLRKIIPGATDKSYGIHVARLAGVPAKVTQRAEKILQ 803
>gi|431793806|ref|YP_007220711.1| DNA mismatch repair protein MutS [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784032|gb|AGA69315.1| DNA mismatch repair protein MutS [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 850
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 285/565 (50%), Gaps = 51/565 (9%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L E + RL+ + + L L
Sbjct: 267 GQGKKG-TLLSVLDFTKTAFGGRLLRRWLEQPLLVHEEIVKRLDNVESLMEDSFLRGDLI 325
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
+ V D+ ++ K + + A D + +++ L + F + S ++ + +
Sbjct: 326 QLFSKVYDLERLIGKVSYGT--ANARDLLSLSQTLGLLPQLR--FLLTESSAITLKRFIP 381
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
F ++ A+ T E A E I + + G L++ G+ E+DELR I
Sbjct: 382 AFAGLDSLAA--TLEQAINPEAPISLRE---------GNLLKAGYSQEIDELRSISSGGK 430
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT-TLEQLQGFEFAFS 436
+ VA LE + KE + ++GY IF ++ T T L E+
Sbjct: 431 AW---VAKLENTE-----KER---TGIRSLKVGY-NRIFGYYIEVTHTNSHLIPPEYIRK 478
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+R Y TP+ +E + + K++ +E + +L + + +L+A + A
Sbjct: 479 QTLANAER--YITPELKEYEQKILGAEEKVMQLEYQLFLELREKVRQLTPKILEAAHALA 536
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDNDGRI 554
E+D + SLA A + +Y+RP +TL L I GRH V++ M DT F+PNDT + + +
Sbjct: 537 EIDVYTSLAEAAVRYHYIRPEMTLGGDLKIIEGRHPVVESMLQDTSFVPNDTILRPEKHL 596
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
+ITGPN +GKS Y++QVALIV ++ IGSFVPA A + + D S +T+ QS+
Sbjct: 597 ALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQAIIPIADHIFTRVGASDDLTSGQST 656
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
FM+++H+V +LR T SL +LDE G+GT T DG+ + Y ++ PK L TH
Sbjct: 657 FMVEMHEVAHILRHVTPNSLIILDEVGRGTATYDGLSIAWAVAEYLAGQNIQPKTLFATH 716
Query: 667 LTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
EL + E P + + V E+ E+IVFL++++PG A SYG+ A LA
Sbjct: 717 YHELTDLEETHP-----GIFNLHVGVREHG----EEIVFLHKIIPGRADRSYGIQVAKLA 767
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVER 750
G+P+++++RA +L +++ H R
Sbjct: 768 GLPSQLLQRAKIILHELESSAHDSR 792
>gi|323343693|ref|ZP_08083920.1| DNA mismatch repair protein MutS [Prevotella oralis ATCC 33269]
gi|323095512|gb|EFZ38086.1| DNA mismatch repair protein MutS [Prevotella oralis ATCC 33269]
Length = 887
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 287/594 (48%), Gaps = 61/594 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++++LD +L++ Q P G G S+ ++++ TPMG R
Sbjct: 268 ITSLSRIEEERYVRLDKFTIRSLELIQ----PMQEG------GSSLLSVIDRTSTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W + P+ D + + RLN + FF + + E + D+ I+ + +
Sbjct: 318 MLRRWVVFPLRDEKAIERRLNVVDFFFREPQFRQLIDEKFHNIGDLERIISRVAAGRV-- 375
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ + ++ +L+ + +ESL+ LN + E+ + I E
Sbjct: 376 SPREVVQLKNALQALVPIKAACLETDNESLKRLGSQLN--LCEELSDRIAKE-------- 425
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + + G ++ +G+ +LDELR I +FL E+ E+ Q +
Sbjct: 426 ---IQPDPPQLLSKGDVIADGYSADLDELRHISRSGKDFLLEIQEREIAQTGIASLK--- 479
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
+ + + GY + + D E ++ A ++ Y T + +E + +
Sbjct: 480 --VGFNNVFGYYLEVRNTYKDKVPAEWIRKQTLAQAER--------YITQELKEYEEKIL 529
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI +E + +L++ + + ++ N A+LDC LS A A +N Y+RP++
Sbjct: 530 GADEKIQSLEERLFGELIADMQAYIPYIQTDANVVAQLDCLLSFAKTAEENRYVRPVVDD 589
Query: 521 EPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIV 576
+LDI+ GRH + E + +T++PND +D + + I IITGPN +GKS ++Q ALIV
Sbjct: 590 SDVLDIKQGRHPVIENQLPVGETYVPNDIYLDTEKQQIVIITGPNMAGKSALLRQTALIV 649
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
L+ +GS+VPA+ A VGL D S +++ +S+FM+++ + +L + +SL L
Sbjct: 650 LLAQMGSYVPAERAKVGLVDKVFTRVGASDNISLGESTFMVEMTEAASILNNVSQRSLVL 709
Query: 629 LDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYT 686
DE G+GT T DGI + + + + L TH E LNE + K+ R+K Y
Sbjct: 710 FDELGRGTSTYDGISIAWAIVEFLHEQPKARARTLFATHYHE-LNE--MEKNFARIKNYN 766
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+SV + ++FL +L G + S+G+H A +AG+P ++KRA VL+
Sbjct: 767 VSVKEIDGK------VIFLRKLEKGGSEHSFGIHVADIAGMPKSIVKRANTVLK 814
>gi|319900560|ref|YP_004160288.1| DNA mismatch repair protein MutS [Bacteroides helcogenes P 36-108]
gi|319415591|gb|ADV42702.1| DNA mismatch repair protein MutS [Bacteroides helcogenes P 36-108]
Length = 872
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 293/608 (48%), Gaps = 91/608 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 ITSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVQPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ A +K C SL H+ + ++ I S+R++
Sbjct: 363 REVVALKVALQAIEPIKEACVQADNASLNHIGE--QLNICRSIRDR-------------- 406
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I E+ L+I G +++ G ELDELR+I ++L +V E
Sbjct: 407 -IDKEIDNDPPLLIN-----------KGGVIKSGVSAELDELRRIAYSGKDYLLQVQQRE 454
Query: 388 --LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L +P L I Y + GY + + + E ++ ++
Sbjct: 455 SELTGIPSLK-------IGYNNVFGYYIEVRNVHKEKVPQEWIRKQTLVNAER------- 500
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + +E + + KIL +E + +LV + F + N A LDC LS A
Sbjct: 501 -YITQELKEYEEKILGAEDKILVLETQLYTELVQALSEFIPAIQIDANQIARLDCLLSFA 559
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPN 561
A +NNY+RP+++ + +L+I GRH + E + + +I ND +D+ + I IITGPN
Sbjct: 560 TAARENNYIRPVISDDEVLEIHQGRHPVIEKQLPIGEKYIANDVMLDSTTQQIIIITGPN 619
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 620 MAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNE 679
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN 672
+L + +SL L DE G+GT T DGI + + + + L TH E LN
Sbjct: 680 AADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LN 738
Query: 673 EGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
E + KS +R+K Y +SV +N ++FL +L G + S+G+H A LAG+P +
Sbjct: 739 E--MEKSFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKLAGMPKSI 790
Query: 732 IKRAAYVL 739
+KRA +L
Sbjct: 791 VKRADEIL 798
>gi|448451271|ref|ZP_21592754.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
gi|445810705|gb|EMA60721.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
Length = 931
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 295/645 (45%), Gaps = 83/645 (12%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 225 LDSELAVRAAGAVLSYVE-----------ETGAGVLASMTRLTADGADDRVDVDATTQRN 273
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 274 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDREALAARLDA 324
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D A L + +
Sbjct: 325 VEALASAALARDRVREVLGDAYDLERLAARTTSGSAGARELLSVRDTLALLPDLADAIGG 384
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + L D V++ A+ + ELA + + K K G L
Sbjct: 385 TALADSPAAAVL---------DRVDRERAAALREELAEA-------LAEDPPKAKTGGGL 428
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++ G+ ELDEL + +EE+ +L+ +A E + L H+ + Y+ Q+G +
Sbjct: 429 LKAGYDGELDELIERHEEVKSWLDGLAEREKRKHGLSHVTVDRNKTDGYYV-QVGKSVAD 487
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R + R G++ + + +
Sbjct: 488 QVPEHYREIKTLKNSKRF---VTDELAEKEREVLRLEEAR------GELEYDLFE----- 533
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH +
Sbjct: 534 --ELRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTTERRLDVEAGRHPV 591
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VG
Sbjct: 592 VEGTTD-FVPNDLRLDAERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVG 650
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 651 LVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIA 710
Query: 646 GGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y +V + L TH EL LP + + V E + ++ F
Sbjct: 711 WAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTF 760
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
L + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 761 LRTVRDGPTNRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 805
>gi|451982372|ref|ZP_21930688.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
gi|451760378|emb|CCQ91973.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
Length = 882
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 188/690 (27%), Positives = 325/690 (47%), Gaps = 96/690 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G L+ L+ E ++S IT S+ S + LD + +L++ Q+
Sbjct: 246 VSAAGALVQYLK--------ETQKSALQHIT--SLSTFSTQDSMMLDQSTINSLELVQSS 295
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ S+ G ++ TP+G R LR W L+P++ LE + RL+ + +
Sbjct: 296 D---------GQRKHSLLGHLDATCTPLGARRLREWILKPLIRLEAIEQRLDLVGHY--R 344
Query: 250 EELMA--SLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF---EV 304
E L+ L E LK++ D+ +L K + + T D A S+ +L + ++ +
Sbjct: 345 EHLLERNDLRERLKHIFDLERLLGKISMATC--TPRDLIALKNSLRALPEIQEMIGRCPL 402
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
++R+ +D L +Y+ + I+ + G L++ G
Sbjct: 403 PAMSAIRD-----GWD-----------NLDNLYQGIDEQIEDDPPLNIKDGGLIKPGCDQ 446
Query: 365 ELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELD L+ I ++ + + E E +P L + Y GY + + ++ LD
Sbjct: 447 ELDRLKSIMKDSNQAIANLEAREKERTGIPQLK-------VGYNKIYGYYLEVTKKNLDR 499
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
+ ++ ++ + +P+ ++ ++ + K+ +E+ + ++ +
Sbjct: 500 VPDDYIRKQSLVNAER--------FISPELKQYESEITGAEEKVQIIEQRLFHEVRQSVA 551
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM--TVDT 540
+ ELD L A +AHQ NY RP + L IQNGRH L E+
Sbjct: 552 AEGARIQAMAKRIGELDALLGFAQIAHQQNYCRPQMDDGDALRIQNGRHPLVELIDPNQP 611
Query: 541 FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
FIPNDT +D D ++ IITGPN +GKS Y++QVALIV ++ IG FVPA+ A +GL D
Sbjct: 612 FIPNDTHLDCDEHQVAIITGPNMAGKSTYLRQVALIVLMAQIGCFVPAEEAEIGLVDRIF 671
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
H+ QS+FM+++++ +L AT +SL +LDE G+GT T DGI + + +
Sbjct: 672 SRVGAQDHLQKGQSTFMVEMNETANILNNATRRSLIVLDEIGRGTSTFDGISIAWAIVEF 731
Query: 652 FV-TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED----IVFLY 706
+ K L TH EL + ERL F+++ +N + +++ I+FL
Sbjct: 732 LQGPGHIGAKTLFATHYHELT------ELERL-FHSV-----KNYNVQIKEWNDQIIFLR 779
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
++VPG A SYG+H A LAG+P +V++RA VL +N+++ E + + AQ Q +
Sbjct: 780 KIVPGGADKSYGIHVARLAGLPEQVLQRANEVLFNLENSEYDEVGTPK--LAQPQPPETG 837
Query: 767 VEKMLAFDVLKGDL-----RLFFQDLLPSK 791
+++ F + L RL DL P +
Sbjct: 838 PQQLGLFGEVPPPLIQMIKRLDLDDLTPRQ 867
>gi|289424089|ref|ZP_06425875.1| DNA mismatch repair protein MutS [Peptostreptococcus anaerobius
653-L]
gi|289155514|gb|EFD04193.1| DNA mismatch repair protein MutS [Peptostreptococcus anaerobius
653-L]
Length = 891
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 289/587 (49%), Gaps = 55/587 (9%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD L++ +T + + G S+ +++ TPMG R+LR + +P
Sbjct: 262 NDYMVLDLFTRVNLELTKTIRSSNKKG--------SLLQVIDSTSTPMGARMLRKFIEQP 313
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+++++ +N RL+ L L +L E+L+ + D+ I K D
Sbjct: 314 LMNVDLINRRLDITEAILSDFNLRENLRESLERIYDLERICAKVAYDKV--NPKDLINLK 371
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
SI L + S +L D + + C L +Y L+ I S
Sbjct: 372 NSIAKLPEIVTTIANSDSPAL---------DKFKSSIDC----LYDIYRLIDESILEEPS 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G +++ + +L ELR IY ++++ E + + I Y
Sbjct: 419 QGLKDGNIIKSQYSKDLYELRDIYNNGSSIIKDIEKREKERTGAKTLK-----IGYNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L L+ + + ++ E + TP+ +E+++ + + KI +
Sbjct: 474 GYYIEITKAAL--VQLDLDDSYIRKQTLVNAER----FITPELKEVEDKIINAEDKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E +I +D+ + I D + N AELD ++S A++A++N+Y RP ++ L+I +G
Sbjct: 528 EYSIFKDIRNTIYDNIDRIQVVANTIAELDVYVSNAIIANKNSYSRPYVSESGQLEIIDG 587
Query: 530 RH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
RH + Q M + FI N T ++++ +I+IITGPN SGKS Y++Q ALI ++HIGSFVPA
Sbjct: 588 RHPVIEQIMGQENFIANKTSMNDNNKIHIITGPNMSGKSTYMRQTALICLMAHIGSFVPA 647
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S ++ QS+FM+++ +V +L+ AT SL +LDE G+GT T
Sbjct: 648 SSARIPILDRIFTRVGASDDLSQGQSTFMVEMDEVSQILKNATKYSLIILDEVGRGTSTY 707
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
DGI L + Y + + K L TH EL + E + +K Y++ V +
Sbjct: 708 DGISLAWSIVEY-IHDRIGAKTLFATHYHELTDLENTY---DNIKNYSVDV------KEE 757
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+DI+FL ++V A SYG++ A LA +P ++IKRA +L+ + N
Sbjct: 758 GDDIIFLRKIVDRAADRSYGIYVAKLAKLPDDLIKRADSILKDLEKN 804
>gi|310828245|ref|YP_003960602.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
gi|308739979|gb|ADO37639.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
Length = 877
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 291/625 (46%), Gaps = 66/625 (10%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
E VRA+G LL R +D +++ I+ V ++++ LD + L++
Sbjct: 233 EHSVRAAGALL------RYIDETQKR----VLTHINHVSYYKNDEYMILDLSTRRNLELT 282
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + G S+ +++K VT MG R+LR W P+L+ + + +R + +
Sbjct: 283 ETIRSGEKKG--------SLLWVLDKTVTAMGGRMLRRWLEAPLLEKKAIEARQDMVEEL 334
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ L L V D+ I K SF LK S L + + F GI
Sbjct: 335 YRHPGALKDLKGVLGKVYDLERICGKI---SFGTCNPKDMLSLKQSVSALPLLQAFFAGI 391
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
+ + R D+ L +YEL+ ID N G +++ G+ +E+
Sbjct: 392 DAPVFRK-RYGEADL-----------LTDIYELIDASIDDNAPFALKDGKVIKRGYNEEI 439
Query: 367 DELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLE 426
D R+ E+ +++ + LEL + + + Y GY + I + LD T +
Sbjct: 440 DGYREASEKGKDWIRD---LELKERERTGIKSL--KVKYNRVFGYFIEITKTNLDQTPED 494
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
++ A ++ R F TP+ +E++ + ++ +E + +D+ I
Sbjct: 495 YIRKQTLANAE------RFF--TPELKEMETRILGSEERLAQLEYELFQDVREKIIAQIA 546
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPN 544
+ K AE+D SLA VA NY++P +T P L+I+NGRH + E + ++ F+ N
Sbjct: 547 RIQKRARDVAEIDALYSLAQVAIAGNYVKPEITNGPELEIENGRHPVVEEIIGINHFVTN 606
Query: 545 DTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D D R+ +ITGPN +GKS YI+QVA+I ++ IGSF+PAD+ +G+ D
Sbjct: 607 GCHFDGKDLRMMLITGPNMAGKSTYIRQVAVIALMAQIGSFIPADSGRIGIVDRIFTRVG 666
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S + QS+FM+++ +V +L+ AT SL +LDE G+GT T DGI + + Y
Sbjct: 667 ASDDLATGQSTFMVEMTEVSNILKNATQDSLVILDEIGRGTSTFDGISIAWAVVEYLWDE 726
Query: 656 D-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
+ K L TH EL L +K +++ V E +VFL ++ PG A
Sbjct: 727 QIIGAKTLFATHYHELTELEHLKPG--IKNFSIGV------RETPEGVVFLRKIKPGSAD 778
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVL 739
SYG+ A LAG P V RA +L
Sbjct: 779 QSYGIEVARLAGFPPAVTNRAREIL 803
>gi|167745632|ref|ZP_02417759.1| hypothetical protein ANACAC_00324 [Anaerostipes caccae DSM 14662]
gi|167654944|gb|EDR99073.1| DNA mismatch repair protein MutS [Anaerostipes caccae DSM 14662]
Length = 872
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 175/625 (28%), Positives = 297/625 (47%), Gaps = 61/625 (9%)
Query: 163 SVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLL 222
SV ++++ +D+++ L++ +T + G S+ G+++K T MG RLL
Sbjct: 257 SVSPYETSEYMIIDSSSRRNLELCETLRDKKKKG--------SLLGVLDKTKTAMGARLL 308
Query: 223 RNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA 282
R+ +P++D + R +A++ + E L V D+ ++ K + +
Sbjct: 309 RSMIEQPLIDRVKIEERYDALTSLTKQAIAREEIREYLNPVYDLERLMTKVSYQTI--NP 366
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D A S+ L + I E +SL LR + D +E A + E A + E I
Sbjct: 367 RDMIALKVSLQWLPPIKTILE-ECGDSLLSGLRE-DLDTLEDVAGLL--EDAILEEPPIA 422
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
+ + G ++++GF +++D+L++ + ++L ++L + +
Sbjct: 423 VKE---------GGIIKDGFSEQIDQLKRAKTDGKQWL-----MQLEERERRATGIKTLK 468
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
+ + GY + + D ++ S+ Y T + +L + +
Sbjct: 469 VKFNKVFGYYLDVTNSYKDKVPEHYIRKQTLTNSER--------YTTEELNKLADTILGA 520
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
++ +E + + + + K A LD SLA VA QN Y+RP L +
Sbjct: 521 EDRLCALEYETFASIRETLAGEMERIKKTAGVIAYLDVLCSLACVAEQNGYVRPKLNTKG 580
Query: 523 LLDIQNGRH--VLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLS 579
L+DI+ GRH V Q M+ D FI NDT +D+ R++IITGPN +GKS Y++Q ALIV ++
Sbjct: 581 LIDIKEGRHPVVEQMMSNDMFISNDTYLDSKRHRVSIITGPNMAGKSTYMRQSALIVLMA 640
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +G+ D S + + QS+FM+++ +V +LR AT SL +LDE
Sbjct: 641 QIGSFVPAQKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATKDSLLILDE 700
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DG+ + + Y + K L TH EL EG K + Y ++V
Sbjct: 701 IGRGTSTYDGLSIAWAVVEYISNPKLLGAKTLFATHYHELTELEG---KIGSVNNYCIAV 757
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+N IVFL ++V G A SYG+ A LAGVP VI+RA ++ ++ V
Sbjct: 758 KEQGDN------IVFLRKIVKGGADKSYGIQVAKLAGVPDMVIQRAKEIVSELSDSDIVS 811
Query: 750 RWSHENISAQDQQ---YKNAVEKML 771
+ +S++ QQ + N E M+
Sbjct: 812 QAQKIQVSSEPQQLSLFANDSEPMM 836
>gi|391335072|ref|XP_003741921.1| PREDICTED: mutS protein homolog 5-like [Metaseiulus occidentalis]
Length = 795
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 180/646 (27%), Positives = 298/646 (46%), Gaps = 71/646 (10%)
Query: 113 ERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLN-- 170
+++ +LNS++D E+ +R+ G LL + + + D+V+ +L
Sbjct: 147 DKLIFLNSILDFSQEISLRSMGALL-----QHVKSHFQNS---------DAVVIATLGMH 192
Query: 171 ---KFLKLDATAHEALQIFQTDKHPS--HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
L + + L I + HP RA+EG SV+ + + + +GR L++
Sbjct: 193 RGCGHLSVPSRTLRDLHILAEEAHPCAWQGDSRRAREGISVYSLFERNCS-IGRVRLKSL 251
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
F P D+ + L++I + L E L SLH+ L +K I IL N T +W
Sbjct: 252 FCAPYNDVRQIEQSLSSIEYLLDQECLAKSLHQNLARIKRIDRIL--VNMCQGQTTVPEW 309
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
+ LL V + + SL +E+A + + + ++ ID
Sbjct: 310 QVLRDTCHHLLVVQGLLSAAPNSSL--------CGAIERAREASYRDTSSILHMIERTID 361
Query: 346 VNRSKEK-GYGTLVREGFCDELDELR-QIYEELPEFLEEVASLELVQLPHLCKE---MFV 400
KE Y + V+ G CD LDE + Q++ + + L E+ E+ LP + +++
Sbjct: 362 FEAFKENPSYTSPVKAGICDYLDEKKKQLFGNIHKRLTELTLTEMTNLPADVSDGRIIYL 421
Query: 401 PCIVYIHQIGYLMCIFEEKLDDT-TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
PC ++ F +L++ T+ QLQ E MD E F+ T TR+LD
Sbjct: 422 PCWGFV---------FATRLENVGTMRQLQSVEHV-CKMDTEA---FFKTSITRDLDKQY 468
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
GD+ + I+ E I R L + S LLK ++ LD L+LA+ A + + RP +
Sbjct: 469 GDLRNIIIHRENRICRTLQIEVIERSWQLLKIIDKLCHLDAVLALAITARERGFKRPKII 528
Query: 520 LEPLLDIQNGRHVLQEM----TVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALI 575
+ ++NG H L E IPN +NI+TG N GKS+Y++Q ALI
Sbjct: 529 PRNRIIVKNGYHPLLEFHKAPGASHIIPNSYLSTESVPVNIVTGANSCGKSVYLRQNALI 588
Query: 576 VFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATS-QSL 626
V+L+H+GSFVPA+ + + L D+ + M + SSF + Q+ + R S ++L
Sbjct: 589 VYLAHVGSFVPAEDSRICLLDTIQTSFFIDETMRDQASSFALQCRQIASVERSVESVRAL 648
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYT 686
++DEFGKGT T +G L + F+ P V++ +H + L L +++F T
Sbjct: 649 VVIDEFGKGTNTAEGAALCVALVEKFMEWSNSPHVILASHYYKHLYY-FLKHRPKVEFLT 707
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
+ NN +V L+R+V G ++ S+G A A +P EVI
Sbjct: 708 FRYVIEGNN------LVQLHRVVDGVSVKSFGSFAAREADLPQEVI 747
>gi|383787109|ref|YP_005471678.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
gi|383109956|gb|AFG35559.1| DNA mismatch repair protein MutS [Fervidobacterium pennivorans DSM
9078]
Length = 829
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 181/654 (27%), Positives = 314/654 (48%), Gaps = 68/654 (10%)
Query: 148 TLEQKESGNASITIDSVIEV---SLNKFLKLDATA--HEALQIFQTDKHPSHMGIGRAKE 202
T+E E G A + + I+ +LNK KL A E++ + ++ + +
Sbjct: 226 TIEHFELGEAHYPLGATIKYLNYTLNKQAKLKAPRVLDESIYMVLDSSTIENLSLIPGER 285
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G ++F ++NK TPMG RLL+ L P+ D + + R + +S F L + E L
Sbjct: 286 GKNLFDVLNKTKTPMGARLLKWIILHPLKDRKAIEKRHDMVSAFFEDTLLTNEIREYLDG 345
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
V D+ I+ + S A K + SL + ++ E + E+L L++ +V
Sbjct: 346 VYDLERIINRLQYDS---------AKPKDLISLKNTLEVIE-PLREALESNENLIS--LV 393
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
E+ +L+ V E + ++ + G G ++REG ELDE R++ E L+E
Sbjct: 394 EELP-----DLSVVKEKIQNTLNDEIEGDLGEGKIIREGVSKELDEYRELLYHSNEKLKE 448
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL-----DDTTLEQLQGFEFAFSD 437
E ++ +++ V + + GY + I + + D T L+ L E
Sbjct: 449 FEETERIRTG--IQKLKVG---FNNVFGYYIEIPKGQTKNAPEDYTRLQTLVNAER---- 499
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y PK +E + + ++ ++E+ I +L + +++ L K A
Sbjct: 500 ---------YTNPKLKEFEQKILAAKERVEELEKLIFANLCDELKTYTEALRKTSETLAW 550
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINII 557
+D + S A +A Y+RP+L+ +I GRH + E V+ F+PNDT +D + R+ I+
Sbjct: 551 IDIYTSFAYIARLYGYIRPVLS-NGEFEILQGRHPVVERFVNEFVPNDTYMDENLRMYIL 609
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN SGKS YI+Q+ LI +S IGSFVPA+ A + + D ++ +S+F+
Sbjct: 610 TGPNMSGKSTYIRQIGLIALMSQIGSFVPANFAKIPVFDRIFTRMGARDDISTGKSTFLT 669
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++ +V ++L +AT SL LLDE G+GT T DGI + I+ ++ +V K + TH TE
Sbjct: 670 EMSEVALILNKATENSLVLLDEVGRGTSTFDGIS-IAWAISEYIYNEVKCKTVFATHFTE 728
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L + +K T+ V + ++FL+++V G A SYG+ A +AG+P
Sbjct: 729 LTELADMYPG--IKNLTIEVRETPDG------VIFLHKVVEGVADRSYGIEVAAIAGLPQ 780
Query: 730 EVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLF 783
+++RA +L +E+ Q ++ K+ + V +G LR+F
Sbjct: 781 SIVERAKEILNIIVEKSDIEKKVGILKEGQMKKIKSTKKT-----VPEGQLRMF 829
>gi|150017427|ref|YP_001309681.1| DNA mismatch repair protein MutS [Clostridium beijerinckii NCIMB
8052]
gi|189030761|sp|A6LWJ5.1|MUTS_CLOB8 RecName: Full=DNA mismatch repair protein MutS
gi|149903892|gb|ABR34725.1| DNA mismatch repair protein MutS [Clostridium beijerinckii NCIMB
8052]
Length = 928
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 287/582 (49%), Gaps = 59/582 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + S G S+ +++K T MG R +R W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKSKKG--------SLLWVLDKSATSMGGRTIRKWIEEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ RL+ +S S L +LK + DI I+ K ++ + A D + S
Sbjct: 310 IKSEIEKRLSGVSEAFSSISFNEDLRSSLKDIYDIERIVGKISNKNV--NAKDMLSLKAS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + ++ SE L+E N D EL+ + EL+ I S
Sbjct: 368 LDKLPSIKELLGTANSELLKEYYE--NLD-----------ELSDIRELLESSIKEEPSLS 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ E+DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 IKEGNIIKDGYNSEVDELRQSKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYNSIPEGRYVRKQTLANAERYITEELKIME-DKILG-AEEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
++ D+ I L K+ + LD +LAL+A +N+Y++P + + +++I +GR
Sbjct: 522 YSLFTDIRDSIEKEIARLKKSARIISNLDGISTLALIALENDYVKPEINEDGIIEIVDGR 581
Query: 531 HVLQEMTVD--TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ +D + +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 582 HPVVEKVIGRGEFVSNNTTLNQSDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS+SL LLDE G+GT T
Sbjct: 642 SSANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y ++ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITGNENLRCKTLFATHYHELVKLEGVLPG---VKNYSVAVKKMKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++FL ++V G A SYG+ A LAG+P +VI RA +L
Sbjct: 757 ----VIFLRKIVEGGADESYGIEVAKLAGLPDDVINRAKEIL 794
>gi|225012278|ref|ZP_03702715.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-2A]
gi|225003833|gb|EEG41806.1| DNA mismatch repair protein MutS [Flavobacteria bacterium MS024-2A]
Length = 863
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 297/621 (47%), Gaps = 78/621 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ ++ F+ LD L++FQ+ HP EG + +++ T MG R
Sbjct: 252 ITRILPIAQEGFVWLDRFTQRNLELFQS-THP---------EGIPLISIIDHTQTAMGGR 301
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W P+ + + + SR + F+ EE+ + L + DI ++ K SP
Sbjct: 302 LLRRWLAFPLKEQQQIESRHEIVEAFIEQEEISQYTEQALSNIIDIERVMAKIATEKISP 361
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+Y D S+ + + K E G + +++EQL+ + +SC A +
Sbjct: 362 RALYQLQD------SLSEVEGLKKQLEKGSNFTIKEQLKTI--------SSC-----AAI 402
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV--ASLELVQLPHL 394
L+ I G ++ EGF +LD LR + ++ L+ + E Q+P L
Sbjct: 403 ISLIQQTIHPEAPVLVSKGKVIAEGFSSDLDALRGLRDQSQSHLDAMLERETERSQIPSL 462
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
I + + GY + + D + ++ ++ R KT E
Sbjct: 463 K-------IAFNNVFGYYIEVRNTHKDKVPEDWIRKQTLVNAE------RYITEELKTFE 509
Query: 455 LDNL-LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+ L GD +I+ +E+ + +L+ H+ + L + N A+ D A A +NNY
Sbjct: 510 TEILQAGD---RIMALEQQLYAELIQHLQKDLEVLKQNANAVAQWDVLSCFAKTALKNNY 566
Query: 514 MRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
RP LT L+++ RH + Q++ + T +I ND +D + + I +ITGPN SGKS +
Sbjct: 567 CRPTLTQGTELELRGARHPVIEQQLPLGTPYIANDLELDRETQQIMMITGPNMSGKSAIL 626
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GS+VPA AT+G+ D S +++ S+FM+++++ +L
Sbjct: 627 RQTALISLLAQLGSYVPATQATLGVVDKIFTRVGASDNISMGASTFMVEMNETASILNNI 686
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSER 681
+ SL LLDE G+GT T DGI + Y PKVL TH E LNE + R
Sbjct: 687 SDHSLVLLDEIGRGTSTYDGISIAWAIAEYLHEHPFRPKVLFATHYHE-LNE-MTQRYSR 744
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA---YV 738
+K + +S+ +++ ++FL +L+PG + S+G+H A +AG+P V++ A V
Sbjct: 745 IKNFNVSIKEAKDS------VLFLRKLIPGGSAHSFGIHVAKMAGMPQHVLRSAQDKLKV 798
Query: 739 LEAA---QNNKHVERWSHENI 756
LEA+ + ++ E+ S EN+
Sbjct: 799 LEASHGLKKSEKAEKDSEENL 819
>gi|253682135|ref|ZP_04862932.1| DNA mismatch repair protein MutS [Clostridium botulinum D str.
1873]
gi|253561847|gb|EES91299.1| DNA mismatch repair protein MutS [Clostridium botulinum D str.
1873]
Length = 895
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 294/581 (50%), Gaps = 57/581 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L++ +T + +AK+G S+ +++K T MG RLLR W +P++
Sbjct: 259 YLSIDINSRRNLELTETLRD-------KAKKG-SLLWVLDKTTTAMGGRLLRKWVEQPLI 310
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ + R NA+ + + L + E L+ V DI + K +S + A + + S
Sbjct: 311 QKDIIEMRQNAVEEIINNVPLCDDIRENLRDVYDIERLAGKISSKNV--NAKELLSLKNS 368
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
I +L S++ L+ N ++++ I L +Y L+ I + S
Sbjct: 369 IGNL------------PSIKSLLKNFNSNLLKNIYDNIDC-LDDIYSLLDEAILASPSLS 415
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G+ +DELR ++ +ASLE + + + Y GY
Sbjct: 416 IKEGGIIKDGYNSTIDELRMAKSHGKQW---IASLE--EQERTLTGIKSLKVKYNKVFGY 470
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + LD Q+ + +R Y TP+ +E++ + K++++E
Sbjct: 471 YIEITKSNLD-----QVPENRYIRKQTLANCER--YITPELKEVEEKILGAQEKLMELEY 523
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ ++ + I + + +E+D SLA+VA +NNY +P + L I+ GRH
Sbjct: 524 NLFIEIRNLIEKEIYRIKGSAKLISEIDVLTSLAIVALENNYCKPEIKTTGELYIKEGRH 583
Query: 532 VLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + D+F+ NDT +DN D ++ +ITGPN +GKS Y++QVALI L+ IGSFVPA
Sbjct: 584 PVVEKMIPRDSFVSNDTVLDNKDHQLLLITGPNMAGKSTYMRQVALINVLAQIGSFVPAK 643
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A+V + D S + +S+FM+++ +V +L ATS+SL LLDE G+GT T D
Sbjct: 644 KASVVICDKIFTRIGASDDLAKGKSTFMVEMWEVANILNNATSKSLILLDEVGRGTSTYD 703
Query: 641 GIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
G+ + I Y ++ K L TH EL + EG K + +K Y+++V + +
Sbjct: 704 GLSIAWSVIEYICKNNNLKSKTLFATHYHELTSLEG---KIQGVKNYSIAVKKVD----- 755
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+DI+FL +++ G A SYG+ A LAG+P +VI RA +L
Sbjct: 756 -DDIIFLRKIIEGGADESYGIEVAKLAGIPKDVIDRAKEIL 795
>gi|313886368|ref|ZP_07820092.1| DNA mismatch repair protein MutS [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924183|gb|EFR34968.1| DNA mismatch repair protein MutS [Porphyromonas asaccharolytica
PR426713P-I]
Length = 879
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/616 (26%), Positives = 297/616 (48%), Gaps = 71/616 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + + +++D +L++ P + G G ++ ++++ VTPMG R
Sbjct: 262 ITRIVRIDEQRHVRIDGFTAHSLEL----TTPMNAG------GTTLRQILDQTVTPMGAR 311
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL W P+ +L+ + R + ++ + + +L L + +K + D+ ++ +
Sbjct: 312 LLDQWIAFPLKELQAIQQRQSIVANLVDNPQLRTQLTDQMKEIGDLQRLVGRV------- 364
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ ++ +G+S +L +R L D E+ + + + L +L
Sbjct: 365 -----------AMGRITPREVVRLGLSIALIAPIRQLALDEGEETLTALCSLLDPCAQLC 413
Query: 341 IGI---IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
I ++ ++ G G + EGFC+ELD+LR++ + ++L+++ + E H
Sbjct: 414 QQITFQLNPEAPQQIGKGETIAEGFCEELDQLRRLLKSGKQYLDDLLARET---EHTGIS 470
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
I + + GY + + + E ++ ++ Y T + +E +
Sbjct: 471 SL--KIGFNNVFGYYLEVRNTYKEQVPEEWIRKQTLVSAER--------YITQELKEYEE 520
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ +IL +E+ + L+ + F++ LL+ A+LD SLA VA +Y RP
Sbjct: 521 KILGAEDRILALEQELFAKLIGTLQQFANQLLQDAQILAQLDVLASLAAVAKSYDYCRPT 580
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVA 573
L L+I +GRH + E T+ +IPND R+ D +I IITGPN SGKS ++Q A
Sbjct: 581 LNEGYDLEIIDGRHPVIERTLPAGQPYIPNDVRLSPIDCQIMIITGPNMSGKSALLRQTA 640
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV ++ +GSFVPA +AT+G+ D S ++ +S+FM+++ + +L T +S
Sbjct: 641 LIVIMAQMGSFVPATSATIGIVDSVYTRVGASDNIAVGESTFMVEMQEAASILNNLTPRS 700
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
L L DE G+GT T DG+ + + Y T K L TH E LNE ER++
Sbjct: 701 LILFDELGRGTSTFDGVSIAWAIVEYLHSTTQGRAKTLFATHYHE-LNE-LADHLERVQC 758
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y +S + +++FL +LVPG + S+G+ A LAG+P ++ RA VL+
Sbjct: 759 YNVSAREIDG------EMLFLRKLVPGGSAHSFGIQVAKLAGMPTWIVARAGEVLQ---- 808
Query: 745 NKHVERWSHENISAQD 760
H+E + E+ A D
Sbjct: 809 --HLEAYRTESDQAPD 822
>gi|448573151|ref|ZP_21640735.1| DNA mismatch repair protein MutS [Haloferax lucentense DSM 14919]
gi|445718916|gb|ELZ70599.1| DNA mismatch repair protein MutS [Haloferax lucentense DSM 14919]
Length = 924
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 209/774 (27%), Positives = 350/774 (45%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P++ +
Sbjct: 117 QFLAAVVTDGDGVGLAFSDITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPEL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFSTEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L R +A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRHDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASELLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + +++ + ++E + R AA+ + T+L + + K
Sbjct: 372 LADAIEGSELADSPLAEVVSRPDR--------DAAADLRTDLDDA-------LAEDPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L R G+ DELD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFRTGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRF---------VTEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + DL + ++ L AE+D SLA A N + RP LT L
Sbjct: 524 ELFE-------DLRERVARHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTEAGAL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND +D++ I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLHMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|332299823|ref|YP_004441744.1| DNA mismatch repair protein mutS [Porphyromonas asaccharolytica DSM
20707]
gi|332176886|gb|AEE12576.1| DNA mismatch repair protein mutS [Porphyromonas asaccharolytica DSM
20707]
Length = 874
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/616 (26%), Positives = 297/616 (48%), Gaps = 71/616 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + + +++D +L++ P + G G ++ ++++ VTPMG R
Sbjct: 257 ITRIVRIDEQRHVRIDGFTAHSLEL----TTPMNAG------GTTLRQILDQTVTPMGAR 306
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL W P+ +L+ + R + ++ + + +L L + +K + D+ ++ +
Sbjct: 307 LLDQWIAFPLKELQAIQQRQSIVANLVDNPQLRTQLTDQMKEIGDLQRLVGRV------- 359
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ ++ +G+S +L +R L D E+ + + + L +L
Sbjct: 360 -----------AMGRITPREVVRLGLSITLIAPIRQLALDEGEETLTALCSLLDPCAQLC 408
Query: 341 IGI---IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
I ++ ++ G G + EGFC+ELD+LR++ + ++L+++ + E H
Sbjct: 409 QQITFQLNPEAPQQIGKGETIAEGFCEELDQLRRLLKSGKQYLDDLLARET---EHTGIS 465
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
I + + GY + + + E ++ ++ Y T + +E +
Sbjct: 466 SL--KIGFNNVFGYYLEVRNTYKEQVPEEWIRKQTLVSAER--------YITQELKEYEE 515
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ +IL +E+ + L+ + F++ LL+ A+LD SLA VA +Y RP
Sbjct: 516 KILGAEDRILALEQELFAKLIGTLQQFANQLLQDAQILAQLDVLASLAAVAKAYDYCRPT 575
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVA 573
L L+I +GRH + E T+ +IPND R+ D +I IITGPN SGKS ++Q A
Sbjct: 576 LNEGYDLEIVDGRHPVIERTLPAGQPYIPNDVRLSPIDCQIMIITGPNMSGKSALLRQTA 635
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV ++ +GSFVPA +AT+G+ D S ++ +S+FM+++ + +L T +S
Sbjct: 636 LIVIMAQMGSFVPATSATIGIVDSVYTRVGASDNIAVGESTFMVEMQEAASILNNLTPRS 695
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
L L DE G+GT T DG+ + + Y T K L TH E LNE ER++
Sbjct: 696 LILFDELGRGTSTFDGVSIAWAIVEYLHSTTQGRAKTLFATHYHE-LNE-LADHLERVQC 753
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y +S + +++FL +LVPG + S+G+ A LAG+P ++ RA VL+
Sbjct: 754 YNVSAREIDG------EMLFLRKLVPGGSAHSFGIQVAKLAGMPTWIVARAGEVLQ---- 803
Query: 745 NKHVERWSHENISAQD 760
H+E + E+ A D
Sbjct: 804 --HLEAYRTESDQAPD 817
>gi|429729021|ref|ZP_19263709.1| DNA mismatch repair protein MutS [Peptostreptococcus anaerobius VPI
4330]
gi|429146170|gb|EKX89230.1| DNA mismatch repair protein MutS [Peptostreptococcus anaerobius VPI
4330]
Length = 891
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 289/589 (49%), Gaps = 59/589 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N ++ LD L++ +T + + G S+ +++ TPMG R+LR + +P
Sbjct: 262 NDYMVLDLFTRVNLELTKTIRSSNKKG--------SLLQVIDSTSTPMGARMLRKFIEQP 313
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+++++ +N RL+ L L +L E+L+ + D+ I K D
Sbjct: 314 LMNVDLINRRLDITEAILSDFNLRENLRESLERIYDLERICAKVAYDKV--NPKDLINLK 371
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
SI L + S +L D + + C L +Y L+ I S
Sbjct: 372 NSIAKLPEIVTTIANSDSPAL---------DKFKSSIDC----LYDIYRLIDESILEEPS 418
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G +++ + +L ELR IY ++++ E + + I Y
Sbjct: 419 QGLKDGNIIKSQYSKDLYELRDIYNNGSSIIKDIEKREKERTGAKTLK-----IGYNKVF 473
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + I + L L+ + + ++ E + TP+ +E+++ + + KI +
Sbjct: 474 GYYIEITKAAL--VQLDLDDSYIRKQTLVNAER----FITPELKEVEDKIINAEDKIKSL 527
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E +I +D+ + I D + AELD ++S A++A++N+Y RP +T L+I +G
Sbjct: 528 EYSIFKDIRNTIYDNIDRIQVVAKTIAELDVYVSNAIIANKNSYSRPYVTESGQLEIIDG 587
Query: 530 RH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
RH + Q M + FI N+T ++++ +I+IITGPN SGKS Y++Q ALI ++HIGSFVPA
Sbjct: 588 RHPVIEQIMGQENFIANNTSMNDNNKIHIITGPNMSGKSTYMRQTALICLMAHIGSFVPA 647
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S ++ QS+FM+++ +V +L+ AT SL +LDE G+GT T
Sbjct: 648 SSARIPILDRIFTRVGASDDLSQGQSTFMVEMDEVSQILKNATKYSLIILDEVGRGTSTY 707
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNS 696
DGI L + Y + + K L TH LT+L N + +K Y++ V
Sbjct: 708 DGISLAWSIVEY-IHDRIGAKTLFATHYHELTDLEN-----TYDNIKNYSVDV------K 755
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
D +DI+FL ++V A YG++ A LA +P ++IKRA +L+ + N
Sbjct: 756 EDGDDIIFLRKIVDRAADRGYGIYVAKLAKLPDDLIKRADSILKDLEKN 804
>gi|217967464|ref|YP_002352970.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
gi|217336563|gb|ACK42356.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
Length = 853
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 166/604 (27%), Positives = 297/604 (49%), Gaps = 83/604 (13%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L LD+TA + L++ +T + G S+ +++K +T MG RLL+ W L+P+
Sbjct: 260 QYLILDSTAIKHLELLETVREGQRRG--------SLIWVLDKTLTSMGARLLKKWLLQPL 311
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPS---FIYTAS 283
L++ + R AI FL + + E LK + D+ I + N +P ++ A
Sbjct: 312 LNVNAIKKRQEAIKEFLDKDPWRREMEEILKEMPDLERINSRINYNTATPKELIYLRQAL 371
Query: 284 DWTAFLKSICSLLHVNKIFEVGIS----ESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
+ L+ N++ E+ + E L E+L + +VE S I
Sbjct: 372 SFLPLLRKSLEKAESNRLKELKENLPNLEPLYEEL---DRALVESPPSHI---------- 418
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
K+ GY +++G+ LDELR++ E ++L + + E + K +
Sbjct: 419 ----------KDGGY---IKDGYDPNLDELRKLLRESKDWLINLENRERERTG--IKSL- 462
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y GY + + + L+ + ++ ++ + TP+ +E +N +
Sbjct: 463 --KIGYNQVFGYYIEVTKANLNLVPSDYIRKQTLVNAER--------FITPELKEWENKI 512
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
I +E + ++L + S + AE+D ++SLA A + NY+ P +T
Sbjct: 513 LHAEDNIKKIEEELFQNLRKKVIKHSKDITTFAQTIAEIDVYISLAKAAREYNYVCPQIT 572
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ + I+ GRH + E + TF+PND ++ D I++ITGPN +GKS YI+Q+ALI+
Sbjct: 573 NDYEVIIREGRHPVIERMLPPGTFVPNDAYLNKDKFIDLITGPNMAGKSTYIRQIALIII 632
Query: 578 LSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ +GSF+PA A +G+ D +++ +S+F++++ +VG +L AT +SL +L
Sbjct: 633 LAQMGSFIPAKEAKIGVVDRIFTRIGAWDDISSGESTFLVEMKEVGNILSHATERSLIIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYT 686
DE G+GT T DGI + + Y + + K L TH LTEL E + LK +
Sbjct: 693 DEVGRGTSTYDGISIAWAIVEY-IHNKIKAKTLFATHYHELTELEKE-----LKHLKNLS 746
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
++V +DI+FL+++ A SYG++ A LA +P EVI+RA +L + +
Sbjct: 747 VAV------QEKGKDIIFLHKIAEKPADKSYGIYVAQLADLPKEVIERAEKILFELEKGR 800
Query: 747 HVER 750
+++
Sbjct: 801 EIKK 804
>gi|167764018|ref|ZP_02436145.1| hypothetical protein BACSTE_02401 [Bacteroides stercoris ATCC
43183]
gi|167698134|gb|EDS14713.1| DNA mismatch repair protein MutS [Bacteroides stercoris ATCC 43183]
Length = 871
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 171/610 (28%), Positives = 295/610 (48%), Gaps = 93/610 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 ITSLARIEEDKYVRLDKFTVRSLELMGS------MNDG----GSSLLDVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D++ +N RL+ + +F E + E L + D+ I+ K SP
Sbjct: 303 LLKRWMVFPLKDVKPINGRLDVVEYFFRKPEFKGVIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC------SLLHVNKIFEVGISESLREQL-RLLNFDIVEKAA 326
+ A +K C SL H+ ++ I S+R+++ R +N D
Sbjct: 363 REVVALKVALQAIEPIKEACMDADNASLNHIGG--QLDICRSIRDRIEREINNDPP---- 416
Query: 327 SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
+ VN+ G +++ G ELDELR+I ++L ++
Sbjct: 417 -----------------LLVNK------GGVIKSGVNAELDELRRIAYSGKDYLLQIQQR 453
Query: 387 E--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
E L +P L I Y + GY + + D E ++ ++
Sbjct: 454 ESELTGIPSLK-------IGYNNVFGYYIEVRNVHKDKVPQEWIRKQTLVNAER------ 500
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
Y T + +E + + KIL +E + +LV + F + N A LDC LS
Sbjct: 501 --YITQELKEYEEKILGAEDKILVLETQLYAELVQSLSEFIPAIQTDANQIARLDCLLSF 558
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGP 560
A A +NNY+RP+++ + +L+I GRH + E + + ++ ND +D+ +I IITGP
Sbjct: 559 ATAARENNYIRPVISDDEVLEIHQGRHPVIEKQLPIGEKYVANDVMLDSSTQQIIIITGP 618
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLH 612
N +GKS ++Q ALI ++ IG FVPA++A +GL D S +++ +S+FM++++
Sbjct: 619 NMAGKSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMN 678
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELL 671
+ +L + +SL L DE G+GT T DGI + + Y + L TH E L
Sbjct: 679 EAADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPHAKARTLFATHYHE-L 737
Query: 672 NEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
NE + KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P
Sbjct: 738 NE--MEKSFKRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKS 789
Query: 731 VIKRAAYVLE 740
++KRA +L+
Sbjct: 790 IVKRAGDILK 799
>gi|448497556|ref|ZP_21610509.1| DNA mismatch repair protein MutS [Halorubrum coriense DSM 10284]
gi|445699787|gb|ELZ51807.1| DNA mismatch repair protein MutS [Halorubrum coriense DSM 10284]
Length = 924
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 189/648 (29%), Positives = 293/648 (45%), Gaps = 89/648 (13%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ S + VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 224 LDSTLAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 272
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L RL+A
Sbjct: 273 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDRETLADRLDA 323
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNK-- 300
+ + L E L D+ + + S S A + + S+
Sbjct: 324 VEALASAALARDRLREVLGDAYDLERLAARTTSGS---------AGARELLSIRDTLALL 374
Query: 301 ------IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
+ + +++S + L D AA+ + ELA + + K K
Sbjct: 375 PALADAVDDTALADSPAAAV-LGRVD--RDAAAALRGELADA-------LAEDPPKAKTG 424
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYL 412
G L++EG+ DELD L + +E + +L+ +A E Q L H+ + YI Q+G
Sbjct: 425 GGLLKEGYDDELDGLIERHEAVNSWLDGLAEREKRQHGLSHVTVDRNKTDGYYI-QVGKS 483
Query: 413 MC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ + E + TL+ + F +D E +R + R G++ +++ +
Sbjct: 484 VADRVPEHYREIKTLKNSKRF---VTDELAEKEREVLRLEEAR------GELEYELFEA- 533
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
L + ++ L A AELD SLA A + ++ RP LT E LD++ GR
Sbjct: 534 ------LRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTEERRLDVEAGR 587
Query: 531 HVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
H + E T D F+PND R+D D I+TGPN SGKS Y++Q ALI L+ GSFVPA AA
Sbjct: 588 HPVVEATTD-FVPNDLRLDADRGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAA 646
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
VGL D + +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI
Sbjct: 647 EVGLVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGI 706
Query: 643 GLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ Y +V + L TH EL LP+ E + + D E
Sbjct: 707 SIAWAATEYL-HNEVRARTLFATHYHELTTLADHLPRVENVHVAV--------DERDGE- 756
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ FL + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 757 VTFLRTVRDGPTNRSYGVHVADLAGVPDPVVSRADGVLDRLREEKAIE 804
>gi|325859897|ref|ZP_08173027.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
gi|325482823|gb|EGC85826.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
Length = 887
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 169/623 (27%), Positives = 290/623 (46%), Gaps = 76/623 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ VTPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGASLLDVIDNTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + + E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDAKPINERLDVVDYLFREPDFRECIDEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K+ C + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTACLYAKSETLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
A G ++ G+ +LDELR I + ++L E+ E Q
Sbjct: 434 A------------------AKGNVIAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPEDWIRKQTLAQAER--------YITPELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL ME + +L+ + F + N A LDC LS V+ Q Y
Sbjct: 523 EYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQQQRY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP++ +LDI+ GRH + E + + ++PND +D + +I +ITGPN +GKS +
Sbjct: 583 VRPVVDGSEVLDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
T +SL L DE G+GT T DGI + + Y V + L TH E LNE + KS
Sbjct: 703 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRVQARTLFATHYHE-LNE--MEKSF 759
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R++ + +SV + I+FL +L PG + S+G+H A +AG+P ++KRA +L
Sbjct: 760 PRIRNFNVSVKEVDGK------IIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 -EAAQNNKHVERWSHENISAQDQ 761
E +N V + DQ
Sbjct: 814 KELETDNAQVGGVGKAAVERLDQ 836
>gi|365135104|ref|ZP_09343629.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613074|gb|EHL64598.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
Length = 868
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 288/604 (47%), Gaps = 70/604 (11%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
GR K+G ++ +++K T MG+RL+R W +P++++ +N+RL+ + + A +
Sbjct: 288 GREKKG-TLLWVLDKTQTAMGKRLMRAWIEQPLVNVAAINARLDGVEELVGDSVARADIA 346
Query: 258 ETLKYVKDIPHILKKF----NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
L + DI ++ + SP IY L + C L K + +
Sbjct: 347 AALSKIFDIERLMTRTVYGSASPREIYA-------LAATCEQLPRLKALARSFGSA---E 396
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
+ L DI EL+ + EL+ +D N G ++R G+ E+DELR I
Sbjct: 397 ITALLADI---------DELSDIKELIFAAVDENAPAMLKDGGVIRPGYNTEVDELRDIV 447
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
+L A+LE L +E + I Y GY + + + ++
Sbjct: 448 HGGKGYL---ATLE----AKLKEETGIRTLKIGYNRVFGYYIEVSRSFSNQVPANFVRKQ 500
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
A ++ Y T + L+N + ++ +ER + DL+ I + K
Sbjct: 501 TLANAER--------YITEDLKVLENKILGANERLAVLERQLFDDLLHKISAELPRIQKT 552
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID 549
+ A LD +LA VA +N Y +P++ L I+ GRH V+++M F+PNDT +D
Sbjct: 553 ASGMARLDVLTALAEVAVKNGYTKPVVDEGDELIIEEGRHPVIEQMLKGALFVPNDTVLD 612
Query: 550 -NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHM 600
D R+ IITGPN +GKS Y++Q ALI ++ IGSFVPA A +G+ D S +
Sbjct: 613 CGDNRMLIITGPNMAGKSTYMRQTALIALMAQIGSFVPARACRMGVVDAIFTRVGASDDL 672
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD--VP 658
A QS+FM+++ +V +L+ AT++SL +LDE G+GT T DG+ + + + D +
Sbjct: 673 AAGQSTFMVEMTEVAEILQYATAKSLVILDEIGRGTSTFDGMSIARAVVEHIADKDGGMG 732
Query: 659 PKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
K L TH EL + E + + +K Y ++V + + DI FL R+V G A SY
Sbjct: 733 CKTLFATHYHELTDLENAI---DGVKNYNIAVKKRGD------DITFLRRIVRGPADDSY 783
Query: 718 GLHCALLAGVPAEVIKRAAYVLE----AAQNNKHVERWSHENIS--AQDQQYKNAVEKML 771
G+ A LAG+P EV KRA VL+ A N V + N A V+K+
Sbjct: 784 GIEVAKLAGLPGEVTKRAKEVLKVLEATAPNADKVTQLDFGNFEKFAAAPVPSELVDKLT 843
Query: 772 AFDV 775
A DV
Sbjct: 844 AVDV 847
>gi|306821116|ref|ZP_07454732.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550809|gb|EFM38784.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 868
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 288/586 (49%), Gaps = 72/586 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R ++F ++NK T MG R L+ L+P+ + ++ RL +S F+ ++
Sbjct: 289 RRNSNNTLFDVLNKTNTSMGSRKLKQNLLKPLNNESDIKQRLEVLSCFVDDYSFTMNISS 348
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
LK + D+ I S +Y + L SL+ + K+ ++ E E L
Sbjct: 349 ILKEIYDLERI-----SNRIVYDSVSQKDLLNLKSSLICIKKLEDI-FKEKDNEYFAL-- 400
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG----YGTLVREGFCDELDELRQIYE 374
I E +S YE++I +I+ +E G Y ++ + ++L R++ +
Sbjct: 401 --IYENISSV-------NYEVIIALIE-KSIQEMGEDLKYKHKIKSSYDEKLAYYRKLMD 450
Query: 375 ELPEFL--EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
+ L E E + +L I Y GY + I + L + + +
Sbjct: 451 NSSDILIKMEAEEREKTGIKNLK-------INYNKVFGYYIEISKGALQNAKIPE----- 498
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD-------MERAITRDLVSHICLFS 485
D E ++ + R ++ L +I ++L +E ++ + I +
Sbjct: 499 ------DYERRQTLVSSE--RFINQSLKEIEQEMLSARQSEVSLENSLYSQVKDEIKKYI 550
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIP 543
D +++ + A++D + SL+ A +N+Y++P++ ++ L I+NGRH + E +T D F+P
Sbjct: 551 DRIMRLASIVADVDVYTSLSKTAIENDYVKPMIAVDNKLIIKNGRHPVIEKILTDDGFVP 610
Query: 544 NDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
NDT +D D +IITGPN +GKS Y++QVALIV ++HIGS+VPA A+V + D
Sbjct: 611 NDTIVD-DEMTHIITGPNMAGKSTYMRQVALIVLMAHIGSYVPASFASVPIIDGIYTRIG 669
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S ++ QS+FM+++ +V +L+ AT +SL +LDE G+GT T DG+ L + Y +
Sbjct: 670 ASDDLSMGQSTFMVEMSEVSNILKNATEKSLVILDEIGRGTSTYDGMSLAFAIVEY-IAS 728
Query: 656 DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALL 715
++ K LV TH EL + + +K Y M V D +I FL ++V G A
Sbjct: 729 NIKAKTLVSTHYHELT--SLESRFDNIKNYCMLV-------DDTTEIKFLKKIVEGRADK 779
Query: 716 SYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
SYG+H A+LA +P EV++RA +L + + +++ S Q+Q
Sbjct: 780 SYGIHVAMLADIPYEVLERANVILSRLETKEKKSVSNYKKNSPQEQ 825
>gi|307718809|ref|YP_003874341.1| DNA mismatch repair protein MutS [Spirochaeta thermophila DSM 6192]
gi|306532534|gb|ADN02068.1| DNA mismatch repair protein MutS [Spirochaeta thermophila DSM 6192]
Length = 867
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 268/574 (46%), Gaps = 95/574 (16%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
E F+++ ++N TPMG RLLR W L P++ ++ +RL A+ + L+ +L +
Sbjct: 287 EHFTLYRVLNHTTTPMGARLLRRWILYPLVTPADIEARLEAVEHLYRDQHLLQTLRKLFA 346
Query: 262 YVKDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
+ DI + L K ++ + A A+ ++ L + L
Sbjct: 347 SMLDIERLATRVALDKAHAKDLLAIAGTIEAYEEAFALLSGIEAFSSF-----------L 395
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L D+ E ++ + L+ ++D N S G ++REG+ E+D R + +
Sbjct: 396 LPMDLFETLSTLADS-------LLPALMD-NPSTSLNEGNIIREGYDPEVDRCRTLRDHS 447
Query: 377 PEFLEE----------VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEK------- 419
E L+ ++SL+L Y IGY +
Sbjct: 448 QEILDRYLQEERERSGISSLKL---------------KYNKVIGYFFEVTRANAHLVPSY 492
Query: 420 -LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
+ TL Q Q F T+RL EL++ L + +++++ER I DL
Sbjct: 493 FIPRQTLVQTQRF---------TTERLI-------ELESQLAEAEERLVELERKIFMDLR 536
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--M 536
+ LL A +DC SLA A + Y RP++T E +LD++ GRH + E +
Sbjct: 537 ERTKTHLEGLLALGKSVAAIDCLQSLAYAATRYGYTRPVVTTELVLDVKEGRHPVVEAHL 596
Query: 537 TVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+PND +D R + +ITGPN +GKS +++Q ALIV ++ +GSFVPA A +G+
Sbjct: 597 PTGSFVPNDLLLDPPRRTLAVITGPNMAGKSTFLRQNALIVLMAQMGSFVPAKEAVIGIA 656
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S ++ +S+F++++++ +L AT +S+ ++DE G+GT T DG+ +
Sbjct: 657 DRLFCRVGASDNIARGESTFLVEMNETAYILHHATPRSVIIMDEVGRGTGTIDGLSIAWA 716
Query: 648 TINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
+ Y + V + L TH EL K + +S+ E D + IVFL R
Sbjct: 717 VVEYLLE-RVKARTLFATHFHELT------KITHPAVFNLSMAVRE----DRDGIVFLKR 765
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+ G A SYG+H A LAGVP V+KRA + EA
Sbjct: 766 VRAGAAEKSYGIHVARLAGVPEAVVKRARAIEEA 799
>gi|222099881|ref|YP_002534449.1| DNA mismatch repair protein MutS [Thermotoga neapolitana DSM 4359]
gi|254766645|sp|B9K800.1|MUTS_THENN RecName: Full=DNA mismatch repair protein MutS
gi|221572271|gb|ACM23083.1| DNA mismatch repair protein mutS [Thermotoga neapolitana DSM 4359]
Length = 801
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 289/611 (47%), Gaps = 79/611 (12%)
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
+ +S F+ LD+ E L + +K G ++F ++N TPMG RLL+
Sbjct: 243 VTISRKNFMILDSATVENLSLIPGEK------------GKNLFDVLNHTETPMGARLLKK 290
Query: 225 WFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
W L P+ D + + RLNA+ + + L V+D+ I+ + I D
Sbjct: 291 WILHPLTDRQQIEDRLNAVEKLKEDRLKLEQIRNLLSRVRDVERIVSRVEYNRAI--PRD 348
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
A +++ + +N+ L NFD EK + +++L+ I
Sbjct: 349 LVALRETLSVVPELNE--------------ELSNFDFFEKLNFPDS-----LFDLLCKAI 389
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
+ + + G G +++ GF ELDE R + E E L+E E + +++ V
Sbjct: 390 EDDPAGSPGEGKVIKRGFSPELDEYRDLLEHSEEKLKEFEEREREKTG--IQKLKVG--- 444
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + + LD + +E + ++ E + TP+ +E + +
Sbjct: 445 YNQVFGYYIEVTKANLDKVP----EDYERKQTLVNSER----FTTPELKEFETKIMAAKE 496
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+I ++E+ + R++ + + LL+ A +D +LA A NY RP + E +
Sbjct: 497 RIEELEKELFRNVCEEVKKHKETLLEISEELARIDVLATLAYDAILYNYTRPTFS-EDRM 555
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+I GRH + E F+ ND +D++ R +ITGPN SGKS +I+QV LI ++ IGSF
Sbjct: 556 EIIGGRHPVVERFTRDFVENDLYMDDEKRFTVITGPNMSGKSTFIRQVGLISLMAQIGSF 615
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA A + + D + +S+F+++++++ ++L +AT +SL LLDE G+GT
Sbjct: 616 VPAKKAVLPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKATKKSLVLLDEVGRGT 675
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T+DGI + ++ KVL TH EL N E P+ + ++L E
Sbjct: 676 GTQDGISIAWAISEELISRGC--KVLFATHFIELTNLENSFPQVQ-----NKTILVKEEG 728
Query: 696 STDVEDIVFLYRLVPG------HALLSYGLHCALLAGVPAEVIKRAAYVLE------AAQ 743
S ++VF +R+V G A SYG+ A +AG+P VI+RA ++E + +
Sbjct: 729 S----NVVFTHRVVDGVADRSYGADRSYGIEVARIAGIPENVIRRAFEIMEKGFKTKSQR 784
Query: 744 NNKHVERWSHE 754
N V+++S +
Sbjct: 785 KNGKVKKFSQQ 795
>gi|423230556|ref|ZP_17216960.1| DNA mismatch repair protein mutS [Bacteroides dorei CL02T00C15]
gi|423244265|ref|ZP_17225340.1| DNA mismatch repair protein mutS [Bacteroides dorei CL02T12C06]
gi|392630700|gb|EIY24686.1| DNA mismatch repair protein mutS [Bacteroides dorei CL02T00C15]
gi|392642446|gb|EIY36212.1| DNA mismatch repair protein mutS [Bacteroides dorei CL02T12C06]
Length = 870
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 171/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 253 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 301
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 302 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 361
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 362 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 417
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 418 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 462
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 463 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 507
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A VA +NNY
Sbjct: 508 EYEEKILGAEDKILVLETKLYNELVIALAEFIPAIQINANQIARLDCLLAFANVARENNY 567
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS I
Sbjct: 568 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALI 627
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 628 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 687
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 688 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 744
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 745 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 798
>gi|160933107|ref|ZP_02080496.1| hypothetical protein CLOLEP_01950 [Clostridium leptum DSM 753]
gi|156868181|gb|EDO61553.1| DNA mismatch repair protein MutS [Clostridium leptum DSM 753]
Length = 873
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 176/648 (27%), Positives = 314/648 (48%), Gaps = 83/648 (12%)
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
D+G E Q +A L A+L + DT + + I+ + + +F+ +D
Sbjct: 226 DLGMEGQDQAVSALGALLNY--LKDTQRK-----VPLKINRIENYTQAQFMGIDLNTRRN 278
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L++ +T ++ G S+ ++++ T MG+RLLR W +P+L + R NA
Sbjct: 279 LELLETMRNKEKRG--------SLLWVLDQTKTAMGKRLLRTWIEQPLLSCGKIIRRQNA 330
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ C L +L + L V D+ ++ + +Y ++ L+S+ +
Sbjct: 331 VEELYCDPFLCGNLADQLTGVFDLQRLITRI-----VYGTANGRE-LRSLSAT------- 377
Query: 303 EVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGF 362
+G+ L++ L ++++ + T L V++L+ G I + G ++REG+
Sbjct: 378 -IGLLPELKKMLENRKSELLQSIYEDLDT-LEDVHDLIEGSIVDDPPFSVREGGIIREGY 435
Query: 363 CDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FE 417
E+DELR+ +++ E E +P L + Y GY + + ++
Sbjct: 436 NQEVDELRKDMTGGKDYVAAIEKREREKTGIPKLR-------VGYNRVFGYYLEVTNSYK 488
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK--TRELDNLLGDIY---HKILDMERA 472
+++ D+ + K+ + + T+EL +L G I + + +E
Sbjct: 489 DQVPDSYIR----------------KQTLTNCERYVTQELKDLEGRILGAKDRCVQLEYR 532
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHV 532
+ D+ + + + + K N A+LD S A VA +N Y RP + L + ++ RH
Sbjct: 533 LFDDIRTTVSAQQERVQKTSNAIAQLDVLCSFARVAVKNQYCRPEVNLSGKIVLKESRHP 592
Query: 533 LQEMTVDT--FIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
+ E+ D F+PND +D D R+ +ITGPN +GKS Y++Q+ALI ++ +GSFVPA +
Sbjct: 593 VVELLSDASPFVPNDALLDQDENRVLVITGPNMAGKSTYMRQIALIALMAQLGSFVPAAS 652
Query: 590 ATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +GL D S + + QS+FM+++++V +L++ATS SL +LDE G+GT T DG
Sbjct: 653 AEIGLVDQIFTRVGASDDLASGQSTFMVEMNEVADILKRATSNSLLVLDEIGRGTSTFDG 712
Query: 642 IGLLGGTINYFV-TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE 700
+ + + + V + K L TH EL L + +K Y+++V + +
Sbjct: 713 MSIARAVLEFVVDKRKLGAKTLFATHYHELTEMEEL--MDGVKNYSIAVKKRGD------ 764
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
DI FL R++ G A SYG+ A LAG+P VI RA VL+ + + V
Sbjct: 765 DITFLRRIIRGGADDSYGIEVAKLAGLPQPVINRAKQVLKELETGQEV 812
>gi|358396124|gb|EHK45511.1| hypothetical protein TRIATDRAFT_127936, partial [Trichoderma
atroviride IMI 206040]
Length = 722
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 195/744 (26%), Positives = 323/744 (43%), Gaps = 131/744 (17%)
Query: 49 AQPQIIYTSTKSEESFLSAL-KRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMD- 106
AQP I S + ES + + K ++ + + +LV S FS+ A L+ L + +
Sbjct: 66 AQPTTILVSRRVPESIFAFIEKHAEKSDKEIRSRLVSPSDFSHTLACEELMSLDTSSANV 125
Query: 107 ------------------DGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDT 148
D +K C +S D+ + + + +L L R + +
Sbjct: 126 ERHYTESSIQALQECDRQDSQCMKLVRC--SSSTDLDNVTSMGCASAILIYLRRRRSLVS 183
Query: 149 LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIG------RAKE 202
+ + + +L ++ + + +LQI + HP+ KE
Sbjct: 184 PSSNTNTGYMFDVRYITLFNLADYVFVSEESRLSLQIISHESHPNRPAWSVDSKSSAEKE 243
Query: 203 GFSVFGMMNKCV-TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
SV+G+ + V TP GR LR+ FLRP+ +L L+ R I+ L
Sbjct: 244 NLSVYGLFHPLVSTPQGRTHLRHMFLRPVSNLNILSQRQRTIALLL-------------- 289
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
PS T A L+ + ++ + I V ++ R +NFD
Sbjct: 290 -------------HPSNEETTKRAIAILRKMKNI--IGGIDPVSLALVGDMINRFINFDD 334
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
+ C VR G ELD L++ Y+ + L
Sbjct: 335 AKSQKYCS----------------------------VRPGVDTELDALKRQYDGMNSLLT 366
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE 441
V LP ++ C V+ Q+G+L + +E QL+ F +GE
Sbjct: 367 AVVERVAKGLPDWARQYIQSC-VFFPQLGFLTIVGQEP-------QLENDIF-----NGE 413
Query: 442 TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCF 501
+ +Y GD+Y KI D E + + L S + + LL+A + E D
Sbjct: 414 NR--YY------------GDMYSKISDKEVEVMQKLASDVIVHEKALLEAADLCGEFDAL 459
Query: 502 LSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRIN------ 555
L+LA+ A + N+ P +T ++ I+ G H LQE+ V +F+ ND I + +
Sbjct: 460 LALAIGAAKYNWQPPKMTDANVIHIKGGWHPLQELLVPSFVRNDCFIGEESLTHGQATQA 519
Query: 556 -IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--KHMTAEQ------SS 606
++TGPN SGKS+YIKQVA+IV+L+HIGS+VPA A +G D M +++ S+
Sbjct: 520 LVLTGPNQSGKSVYIKQVAIIVYLAHIGSYVPAKEAVIGTVDKILTRMPSQESVSRVGSA 579
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCT 665
F +DL QV ++ +TS+SL L+DEFG T + G GL ++YF++ PK++V T
Sbjct: 580 FALDLKQVFQAMKYSTSRSLVLMDEFGNRTAADGGAGLFTAMLDYFLSPATAIPKLVVAT 639
Query: 666 HLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALL 724
H E+ G L +L M V+ ++T+ ED + +L+ L G++ G CA+L
Sbjct: 640 HFYEVFLNGYLHDHSQLSLMHMDVM-INIDATNAEDKVTYLFHLATGYSSTGLGGQCAIL 698
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHV 748
G+P ++ RA + E + K++
Sbjct: 699 NGIPKDITDRAEIIGELIKQGKNL 722
>gi|313893371|ref|ZP_07826943.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
gi|313442012|gb|EFR60432.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
Length = 877
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/599 (27%), Positives = 293/599 (48%), Gaps = 58/599 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEIIHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A++ + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDVNQIQRRQAAVAELITRGAERSHMRSLLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ D TA +S+ L + + G SL L +N I + +Y+L+
Sbjct: 363 SPRDLTALRESLAVLPDMKDVL--GTCSSL--ALTSINDRIQDHKD---------IYDLL 409
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 410 CHAIADQPALTLKEGRVIKDGFNPDLDELRSLATNSEQWLAKMEA-DIKEATGLSKIK-- 466
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + K EQ+ + F +R Y TP+ +E + +
Sbjct: 467 --TGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEIKIL 516
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI+ +E + + L + I L + + AELD SLALV ++ NY+ P + +
Sbjct: 517 SAKDKIIALEHELYQQLRNDIKLVIKDVQETARALAELDVLCSLALVGYEENYICPTIVM 576
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVF 577
++I++GRH + E + + F+PND ++ +D +ITGPN +GKS Y++Q A+++
Sbjct: 577 NGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDDEEFLLITGPNMAGKSTYMRQAAILMI 636
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL +L
Sbjct: 637 MAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSLIIL 696
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMS 688
DE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK YT++
Sbjct: 697 DEIGRGTSTFDGLSIAQAVVEH-ICKHIHGKTLFATHYHELI---CLEESYSKLKNYTVA 752
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++ H
Sbjct: 753 V------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQSH 805
>gi|291294833|ref|YP_003506231.1| DNA mismatch repair protein MutS [Meiothermus ruber DSM 1279]
gi|290469792|gb|ADD27211.1| DNA mismatch repair protein MutS [Meiothermus ruber DSM 1279]
Length = 853
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 183/644 (28%), Positives = 295/644 (45%), Gaps = 73/644 (11%)
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVT 215
N + S + F++L L+IF+ PS +G E ++ G++ T
Sbjct: 250 NGLPQVRSFVRYDPGAFMQLSEATLRTLEIFE----PSF--VGDRSEERTLLGVLGLTRT 303
Query: 216 PMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-- 273
GRRLLR W P+++ L +RL+A+ + L A + + L + D+ + +
Sbjct: 304 APGRRLLRAWLRHPLVEEAPLQARLDAVEALVKDGVLRAEVRKVLYRMHDLERLAARLLA 363
Query: 274 --NSPSFIYTASDWTAFLKSICSLLH-VNKIFEVGISESLREQLRLLNFDIVEKAASCIT 330
SP + A L + LL V +F +SE L + + + E+ A+ +
Sbjct: 364 GRASPRDLAALQRSLALLPELAGLLAGVGPLF--SLSERLPQPV-----AVAEQIAAAL- 415
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLEL 388
V + + I D G L+REGF ELDELRQ EE ++ E + E
Sbjct: 416 -----VEDPPLKITD---------GGLIREGFDPELDELRQRAEEGRAWIARLEGEAREK 461
Query: 389 VQLPHLCKEMFVPCIVYIHQIGYLMCIFEE--KLDDTTLEQLQGFEFAFSDMDGETKRLF 446
+P+L + Y GY + + L LQ + R+
Sbjct: 462 TGIPNLK-------VGYNAVFGYYLEVTRPHYALVPKDWRALQTLK----------DRMR 504
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ TP+ +E + + + + E A+ +L + +D + +A AELD + +LA
Sbjct: 505 FSTPELKEQERKILQAETEAIKREYAVFLELREQVAQAADEVRQAAQVLAELDVYAALAE 564
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKS 566
A + Y RP + + L I GRH + E + FIPND + R+ I+TGPN +GKS
Sbjct: 565 AAVEYGYSRPRFSRDGTLQIVAGRHPVVERS-SPFIPNDLSMSPAARLLILTGPNMAGKS 623
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
Y++Q ALI L+ +GSFVPA++AT+ L D S + +S+FM+++ ++ +L
Sbjct: 624 TYLRQTALIALLAQVGSFVPAESATLPLFDRIYTRIGASDDIAGGRSTFMVEMDELAGIL 683
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPK 678
+ ATS+SL LLDE G+GT T DG+ L Y + V L TH EL LP
Sbjct: 684 QGATSKSLVLLDEIGRGTSTYDGLALAWAACEY-LHDQVRAYTLFATHYFELT---ALPL 739
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ E +VF ++++PG A SYGL A LAG+P V++RA V
Sbjct: 740 RMAAARNAHVAAKEEAGG-----LVFYHQVLPGPASQSYGLEVARLAGLPQAVLQRARSV 794
Query: 739 LEAAQ-NNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLR 781
L++ + + K + + E + D + +E +L L+ LR
Sbjct: 795 LDSLEASQKGLSKEILEELLQLDLARTSPLEALLFLRRLQDQLR 838
>gi|445116827|ref|ZP_21378658.1| DNA mismatch repair protein mutS [Prevotella nigrescens F0103]
gi|444839996|gb|ELX67040.1| DNA mismatch repair protein mutS [Prevotella nigrescens F0103]
Length = 932
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 283/600 (47%), Gaps = 73/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K+++LD +L++ + ++G S+ ++++ +TPMG R
Sbjct: 311 ITSLARIEEEKYVRLDRFTIRSLELVAPMQ----------EDGSSLLNVVDRTITPMGGR 360
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L W + P+ D++ +N RL+ + ++ + L + L + D+ I+ K SP
Sbjct: 361 MLHRWLVFPLKDVKPINERLDIVEYYFREPDFRQCLDDQLHRMGDLERIISKVAAGRVSP 420
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K+ C + + VG +L E +R D +E+ +L
Sbjct: 421 REVVQLKIALRAIQPMKTACLYANNEALKRVGEQLNLCESVR----DRIEQEIKPDPPQL 476
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ GF ELDELR I + + L ++ E Q
Sbjct: 477 V------------------AKGNVIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTGI 518
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 519 SSLK-----IGFNNVFGYYLEVRNTFKDKVPADWIRKQTLAQAER--------YITPELK 565
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A +A +N Y
Sbjct: 566 EYEAKILGADEKILALEARLFNELVQDMQEFIPQIQINANLVARLDCLLAFANIAEENKY 625
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +IPND +DN+ + I +ITGPN +GKS +
Sbjct: 626 VRPVVDDSMVIDIKKGRHPVIETQLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALL 685
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IGSFVPA+ A +GL D S +++ +S+FM+++ + +L
Sbjct: 686 RQTALIVLLAQIGSFVPAEGARIGLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNV 745
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSE 680
T +SL L DE G+GT T DGI + + Y + L TH E LNE
Sbjct: 746 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRAAARTLFATHYHE-LNE-MAKNFR 803
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R+K + +SV + I+F+ +L G + S+G+H A +AG+P ++KRA VL+
Sbjct: 804 RIKNFNVSVKEVDGK------IIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVLK 857
>gi|386346893|ref|YP_006045142.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
gi|339411860|gb|AEJ61425.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
Length = 867
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 268/574 (46%), Gaps = 95/574 (16%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
E F+++ ++N TPMG RLLR W L P++ ++ +RL A+ + L+ +L +
Sbjct: 287 EHFTLYRVLNHTTTPMGARLLRRWILYPLVAPADIEARLEAVEHLYRDQHLLQTLRKLFA 346
Query: 262 YVKDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
+ DI + L K ++ + A A+ ++ L + L
Sbjct: 347 SMLDIERLATRVALDKAHAKDLLAIAGTIEAYEEAFALLSGIEAFSSF-----------L 395
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L D+ E ++ + L+ ++D N + G ++REG+ E+D R + +
Sbjct: 396 LPVDLFETLSTLADS-------LLPALMD-NPATSLNEGNIIREGYDPEVDRCRTLRDHS 447
Query: 377 PEFLEE----------VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEK------- 419
E L+ ++SL+L Y IGY +
Sbjct: 448 QEILDRYLQEERERSGISSLKL---------------KYNKVIGYFFEVTRANAHLVPSY 492
Query: 420 -LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
+ TL Q Q F T+RL EL++ L + +++++ER I DL
Sbjct: 493 FIPRQTLVQTQRF---------TTERLI-------ELESQLAEAEERLVELERKIFMDLR 536
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--M 536
+ LL A +DC SLA A + Y RP+LT E +LD++ GRH + E +
Sbjct: 537 ERTKTHLEGLLALGKSVAAIDCLQSLAYAATRYGYTRPVLTTELVLDVKEGRHPVVEAHL 596
Query: 537 TVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+F+PND +D R + +ITGPN +GKS +++Q ALIV ++ +GSFVPA A +G+
Sbjct: 597 PTGSFVPNDLLLDPPRRTLAVITGPNMAGKSTFLRQNALIVLMAQMGSFVPAKEAVIGIA 656
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S ++ +S+F++++++ +L AT +S+ ++DE G+GT T DG+ +
Sbjct: 657 DRLFCRVGASDNIARGESTFLVEMNETAYILHHATPRSVIIMDEVGRGTGTIDGLSIAWA 716
Query: 648 TINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
+ Y + V + L TH EL K + +S+ E D + IVFL R
Sbjct: 717 VVEYLLE-RVKARTLFATHFHELT------KITHPAVFNLSMAVRE----DRDGIVFLKR 765
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+ G A SYG+H A LAGVP V+KRA + EA
Sbjct: 766 VRAGAAEKSYGIHVARLAGVPEAVVKRARAIEEA 799
>gi|72387191|ref|XP_844020.1| mismatch repair protein MSH5 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62358881|gb|AAX79333.1| mismatch repair protein MSH5, putative [Trypanosoma brucei]
gi|70800552|gb|AAZ10461.1| mismatch repair protein MSH5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 732
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 181/644 (28%), Positives = 285/644 (44%), Gaps = 82/644 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHMGIGRAKEGFSVFGMMNKCVTPMGR 219
+ V EV L +DA +LQI +T+ HP + GIG++KEG S+ ++++ P+G
Sbjct: 101 VADVAEVPPAGVLYVDADTLSSLQIIRTEAHPMDYQGIGQSKEGLSLLSVVDRTSGPLGG 160
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLHETLKYVKDIPHILKKFNSPS 277
LLR WF P+ + L R + + FF + +M +L +LK ++ I K +
Sbjct: 161 ALLRQWFALPLQNERELQQRYSVVDFFTNRDNHSIMTNLRRSLKRLRQPGSIFTKMRASK 220
Query: 278 FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY 337
+T D+ + L+S LL + + +E+ R L + ASC +L +
Sbjct: 221 --HTTGDYDSLLRSTLGLLQIASLLS---TEAHRFPL------FMRIVASCQAAQLEEMS 269
Query: 338 ELVIGIIDVNRSKEKGYGTL---VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL 394
+++ I + R G +R G ELDELR+ + L E L VA E LP
Sbjct: 270 DIITRSISLTREPRDTLGKTYVRIRPGCDPELDELREHFAHLDELLTRVAEEEKQGLPPH 329
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+ + C + Q G+++ + E + +E DG F+ T TR
Sbjct: 330 WRPGTLLC-AFAPQWGHVIVLPHCPPTLLETELPRDWELVLQTDDGP----FFKTSLTRR 384
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
LD +GD+ ILD E + R V H L L ++ AELDC + AL A + +
Sbjct: 385 LDEEVGDLRSAILDREGEVQRR-VDHRLLELSPALIPLHLCAELDCLIGFALCALEGQWS 443
Query: 515 RP-ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQV 572
RP I+ +L+I H + +P I R+ ++TG N SGKS++I +
Sbjct: 444 RPEIVPDAGVLEISRAVHPILARMSQPVVPCSLTIRRSADRVCVVTGANGSGKSVFITTI 503
Query: 573 ALIVFLSHIGSFVPADAATVGLTDS---KHMTAE--------------QSSFMIDLHQVG 615
A VFL+HIGS+VP A +GL D+ H + SSF +L +
Sbjct: 504 AHTVFLAHIGSYVPCAHAAIGLIDTFVALHTPSACRGNEDLTFAVKELHSSFGNELASMS 563
Query: 616 MMLRQATSQS----------LCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVC 664
ML++ S+ L ++DEFGKGTL+ DG LL ++ F++ + P VL+
Sbjct: 564 RMLQRCGSRCRESDEGAARMLLVIDEFGKGTLSVDGAALLAASLRTFISMGNQRPLVLLA 623
Query: 665 THLTELLNEGCLPKSERLKFYTMSVL------RPENN-----STDVEDIV-FLYRLVPGH 712
TH E + +P+ E + ++ L RP + D D V Y LVP +
Sbjct: 624 THYMEAVQPNIVPRGEIILIEMLTTLLESSRKRPRDGVRAHLGADSTDFVGGSYELVPSY 683
Query: 713 ALL-----------------SYGLHCALLAGVPAEVIKRAAYVL 739
+ S LH A VP +++RA V+
Sbjct: 684 NAVPVRNVGEDGKLPDDEVSSRALHFAFQHSVPEVLLRRAWSVM 727
>gi|340052893|emb|CCC47179.1| putative mismatch repair protein MSH [Trypanosoma vivax Y486]
Length = 795
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 200/729 (27%), Positives = 324/729 (44%), Gaps = 113/729 (15%)
Query: 80 VKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRA---SGGL 136
V + SIF + + WH YL ++ + + V+ + L
Sbjct: 106 VVVCAPSIFDHSRVWH---------------------YLGTLWEDVTRVEWCSRINPQKL 144
Query: 137 LAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHP-SHM 195
+ ++ ++ L++K S A I EV + L +D ALQ+ +++ HP
Sbjct: 145 VMLMSLSALLHNLQRKGSSVADIA-----EVPPHGVLYIDDHTLSALQLVRSESHPMDFQ 199
Query: 196 GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELM 253
GIGR+KEG S+ ++++ +P+G+ LLR WF+ P+ D E L RL+ ++FF S+ EL+
Sbjct: 200 GIGRSKEGLSLLAVVDRTCSPLGKSLLRQWFVTPVRDEEELRRRLDVVTFFTNSDSFELL 259
Query: 254 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
+ L +L+ ++ I K + +T D+ + ++ L + + +S +Q
Sbjct: 260 SQLRRSLRQLRQPGPIFTKMRAGK--HTRRDYESLFRTATGFLQIVYL----LSPFAHQQ 313
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDV----NRSKEKGYGTLVREGFCDELDEL 369
L SC T+ L+ + +++ I + N + K Y VR G+ LDEL
Sbjct: 314 SSFLRV-----VTSCQTSRLSEMRDIIDRAICLSKYSNETLNKTY-VEVRPGYDMTLDEL 367
Query: 370 RQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
R L E + VA E + LP C+ + C V+ Q+GY++ I + + E +
Sbjct: 368 RAHCTHLDEVMTRVACEEALSLPPQCQPCTLFC-VFAPQLGYVITISHDSVQTLDPESMP 426
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLL 489
+E + +G + TP TR +D LGDI +L+ E + R + + S L+
Sbjct: 427 EWELLLTTEEGP----LFKTPLTRRMDVELGDIRSAVLEREAEVRRHVDQRLLELSPALI 482
Query: 490 KAVNFAAELDCFLSLALVAHQNNYMRPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRI 548
+ AELDC AL A + + RP + P +L + G H + T +P +I
Sbjct: 483 PLCH-CAELDCLTGFALCALEGQWSRPEIVQTPGVLVVDRGVHPILSRTTHQVVPYSIQI 541
Query: 549 DNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAEQ 604
RI ++TG N SGKSI+I +A +VFL HIG +VP A VGL D S H +A
Sbjct: 542 RTPAQRICVVTGANGSGKSIFITAIAHLVFLVHIGCYVPCGHAIVGLMDSFMSLHGSATH 601
Query: 605 --------------SSFMIDLHQVGMMLRQATSQS----------LCLLDEFGKGTLTED 640
SSF +L + ML+ +S+ L +LDEFGKGTL D
Sbjct: 602 GSSSNHLGSLRELNSSFSSELVCMSRMLKCCSSRCKESADGASRVLLVLDEFGKGTLAAD 661
Query: 641 GIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS--- 696
G LL ++ + D P VL+ TH E+L+ LP + L ++ P + +
Sbjct: 662 GAALLAASLRTITSLSDGCPIVLLATHYVEILHPYLLPLQKILVIEMLTAFGPTDCTLCQ 721
Query: 697 ---------------TDVEDIVFLYRLVP-----------GHALLSYGLHCALLAGVPAE 730
+D+ D+V Y VP S LH A VP
Sbjct: 722 NTAETEEPVTDLDRLSDIGDLVHSYNAVPVGDEVGSENFASRRASSQALHFARQFSVPTV 781
Query: 731 VIKRAAYVL 739
+++RA +L
Sbjct: 782 LLERAHEIL 790
>gi|327312778|ref|YP_004328215.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
gi|326945312|gb|AEA21197.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
Length = 887
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/626 (27%), Positives = 294/626 (46%), Gaps = 82/626 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ VTPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGASLLDVIDNTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + + E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDAKPINERLDVVDYLFREPDFRECIDEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K+ C + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTACLYAKSETLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
A G ++ G+ +LDELR I + ++L E+ E Q
Sbjct: 434 A------------------AKGNVIAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ I + + GY + + F++K+ + + + + +R Y TP
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPENWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KIL ME + +L+ + F + N A LDC LS V+ Q
Sbjct: 520 ELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQQ 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKS 566
Y+RP++ +LDI+ GRH + E + + ++PND +D + +I +ITGPN +GKS
Sbjct: 580 QRYVRPVVDGSEVLDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLP 677
T +SL L DE G+GT T DGI + + Y V + L TH E LNE +
Sbjct: 700 NNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRVQARTLFATHYHE-LNE--ME 756
Query: 678 KS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
KS R++ + +SV + I+FL +L PG + S+G+H A +AG+P ++KRA
Sbjct: 757 KSFPRIRNFNVSVKEVDGK------IIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVKRAN 810
Query: 737 YVL-EAAQNNKHVERWSHENISAQDQ 761
+L E +N V + DQ
Sbjct: 811 VILKELETDNAQVGGVGKAAVERLDQ 836
>gi|410096844|ref|ZP_11291829.1| DNA mismatch repair protein mutS [Parabacteroides goldsteinii
CL02T12C30]
gi|409225461|gb|EKN18380.1| DNA mismatch repair protein mutS [Parabacteroides goldsteinii
CL02T12C30]
Length = 880
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 280/577 (48%), Gaps = 81/577 (14%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K V+PMG R+LR W L P+ D++ + R N + +F E+ L E ++
Sbjct: 283 EGTSLLDVIDKTVSPMGSRMLRRWVLFPLKDVKPIQERQNVVDYFFRHPEVKEILDEQIE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + V E ++ ++ L +
Sbjct: 343 QIGDLERIISKV--------------------------AVGRVSPREVVQLKVALRAIEP 376
Query: 322 VEKAASCITTE---LAYVYELVIGIIDVNRSKEK----------GYGTLVREGFCDELDE 368
+++A C+ ++ L+ V E + ++ EK G ++ +G ELDE
Sbjct: 377 IKEA--CMASDEPSLSRVGEQLNACTEIRDRIEKEINNDPPALLNKGGVIAKGINAELDE 434
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLE 426
LR I ++L +V E ++ +P I + + GY + + D E
Sbjct: 435 LRAIAYSGKDYLLKVQQRE-------SEKTGIPSLKIAFNNVFGYYIEVRNAHKDKVPAE 487
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
++ ++ Y T + +E + + KIL +E + +LV+ + F
Sbjct: 488 WIRKQTLVNAER--------YITEELKEYEEKILGAEEKILALENRLFTELVTCLAEFIP 539
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIP 543
+ N LDC LS A VA N Y+RP + ++DI++GRH + E + + +I
Sbjct: 540 PIQVNANQIGRLDCLLSFAKVAESNRYIRPNVDDSDVIDIKSGRHPVIEKQLPLGEAYIA 599
Query: 544 NDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------ 596
ND +D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D
Sbjct: 600 NDVYLDSEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESARIGMVDKIFTRV 659
Query: 597 --SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT 654
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + + Y
Sbjct: 660 GASDNISVGESTFMVEMNEASNILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHE 719
Query: 655 -CDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ K L TH E LNE + +S +R+K Y +SV N ++FL +LVPG
Sbjct: 720 HPNARAKTLFATHYHE-LNE--MERSFKRIKNYNVSVKEVSNK------VIFLRKLVPGG 770
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ S+G+H A +AG+P ++KR+ +L+ + + E
Sbjct: 771 SEHSFGIHVAKMAGMPKSIVKRSNEILKQLETDNRQE 807
>gi|238019355|ref|ZP_04599781.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
gi|237864054|gb|EEP65344.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
Length = 877
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/599 (27%), Positives = 291/599 (48%), Gaps = 58/599 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A++ + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDVNQIQRRQAAVAELITRGAERSHIRSLLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ D TA +S+ L + + S SL CI + +Y+L+
Sbjct: 363 SPRDLTALRESLAVLPDIKNVLSTCASLSL------------TSINDCIQ-DHKDIYDLL 409
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 410 CRAIADQPALTLKEGRVIKDGFNPDLDELRSLATNSEQWLAKMEA-DIKEATGLSKIK-- 466
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + K EQ+ + F +R Y TP+ +E + +
Sbjct: 467 --TGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEIKIL 516
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI+ +E + + L + I L + + AELD SLALV ++ NY+ P + +
Sbjct: 517 SAKDKIIALEYELYQQLRNDIKLVIKDVQETARALAELDVLGSLALVGYEENYICPTIVM 576
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVF 577
++I++GRH + E + + F+PND ++ +D +ITGPN +GKS Y++Q A+++
Sbjct: 577 NGQINIRDGRHPVIEKFLKREVFVPNDIFLNHDDEEFLLITGPNMAGKSTYMRQAAILMI 636
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL +L
Sbjct: 637 MAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSLIIL 696
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMS 688
DE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK YT++
Sbjct: 697 DEIGRGTSTFDGLSIAQAVVEH-ICKHIHGKTLFATHYHELI---CLEESYSKLKNYTVA 752
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++ H
Sbjct: 753 V------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQSH 805
>gi|189218126|ref|YP_001938768.1| Mismatch repair ATPase MutS [Methylacidiphilum infernorum V4]
gi|189184984|gb|ACD82169.1| Mismatch repair ATPase MutS [Methylacidiphilum infernorum V4]
Length = 834
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/594 (29%), Positives = 283/594 (47%), Gaps = 67/594 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++++ L +DA A + L+I T ++K G S+F +++ VTP G R
Sbjct: 259 IVKILQIVPQHILWIDAIAQKTLEINHT----------QSKSGKSLFEAIDRTVTPGGGR 308
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W P L + R AISF+L + L E L+ + D+ +L K + Y
Sbjct: 309 LLRRWLSEPSNQLGVIEERQQAISFWLNNPNKRKELREILEKIGDLERLLSKVSQG---Y 365
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQL--RLLNFDIVEKAASCITTELAYVYE 338
+ +K L V K G+ SL E L RL DI + E A
Sbjct: 366 VNPRELSSIKESLRQLPVVK----GLLSSLDEGLICRLCE-DIALENELVEELEKA---- 416
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
++ N G ++++G+C LDEL+++ E+ ++L ++ Q +
Sbjct: 417 -----LEENPPFSTKEGGIIKKGYCPALDELKEMSEQGKKWL-----IDFEQKEREKTGI 466
Query: 399 FVPCIVYIHQIGYLMCIF--EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
I Y GYL+ + + K E+ Q +R TP+ +E++
Sbjct: 467 KTLKIKYNQVFGYLIEVSHSQSKWVPQHYERRQTL--------ANVERFI--TPELKEIE 516
Query: 457 -NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
+LG ++ +++E+ + L I + K + +LD SLA +A + NY +
Sbjct: 517 LKILGS-KNRAIELEQNLFEVLKEKIASRIPSIQKTMEAINKLDVLTSLADLAQERNYCK 575
Query: 516 PILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P + EP+++I+ GRH V Q M F+PN T + D RI +ITGPN +GKS YI+QVA
Sbjct: 576 PTMVDEPVIEIEEGRHPIVEQCMASGDFVPNSTYLGPDQRILLITGPNMAGKSTYIRQVA 635
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
L+ L+H GSF+PA A +GL D + + QS+F++++++ +L ATS+S
Sbjct: 636 LLSLLAHTGSFIPAKKAKIGLLDRIFTRIGSNDDLAMGQSTFLVEMNETANILHNATSRS 695
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L +LDE G+GT T DG+ L + + L TH EL + +K Y
Sbjct: 696 LVILDEVGRGTSTFDGLSLAWAIVEELYKTNRSLS-LFATHYHELAKLADI--YPEIKNY 752
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+M+V+ N +VFL ++V G SYG+ A LAG+P VI++A +L
Sbjct: 753 SMAVVESGGN------VVFLRKVVKGSTDKSYGIQVAKLAGIPDRVIEKAKKIL 800
>gi|355677525|ref|ZP_09060428.1| DNA mismatch repair protein mutS [Clostridium citroniae WAL-17108]
gi|354813090|gb|EHE97703.1| DNA mismatch repair protein mutS [Clostridium citroniae WAL-17108]
Length = 888
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 179/645 (27%), Positives = 302/645 (46%), Gaps = 76/645 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ S +F+ +D + L++ +T + G ++ +++K T MG R
Sbjct: 257 ITTITPYSTGQFMVIDTSTRRNLELVETMREKQKRG--------TLLWVLDKTKTAMGAR 308
Query: 221 LLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR++ +P++ + + R A+ ++ EE+ L+ + I I K +P
Sbjct: 309 LLRSYIEQPLIHKDEIMKRQEAVEELNMNYISREEICEYLNPIYDLERLIGRISYKTANP 368
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
D AF S+ L H+ +I E LR L+ L +
Sbjct: 369 R------DLIAFKSSLEMLPHIKRILGEFTGELLRSLAEELD-------------SLQDI 409
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
YEL+ I + G ++++G+ +E D+LRQ E +L E+ S E +
Sbjct: 410 YELIGEAILEDPPVTVREGGIIKDGYNEEADKLRQAKTEGKNWLAELESKEKEKTGIKTL 469
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
K F Y ++ F++++ D F T + T + + L
Sbjct: 470 KVKFNKVFGYYFEV---TNSFKDQVPD-----------YFVRKQTLTNAERFTTDELKHL 515
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++++ K++ +E + + I + K A +D F SL++V+ + NY++
Sbjct: 516 EDIIMGAEDKLVSLEYDLFCQVRDSIAAQVVRIQKTAKAIAGVDVFCSLSVVSTRRNYVK 575
Query: 516 PILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQV 572
P++ + ++ I+NGRH V Q M D F+ NDT +DN R+++ITGPN +GKS Y++QV
Sbjct: 576 PMINEKGVIQIKNGRHPVVEQMMRDDLFVANDTFLDNGKNRLSVITGPNMAGKSTYMRQV 635
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ +GSFVPA A +G+ D S + + QS+FM+++ +V +LR AT
Sbjct: 636 ALIVLMAQLGSFVPAQEADIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRN 695
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERL 682
SL +LDE G+GT T DG+ + I + + + K L TH EL EG + +
Sbjct: 696 SLLVLDEIGRGTSTFDGLSIAWAVIEHISSTKLLGAKTLFATHYHELTELEGTIAG---V 752
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA + E
Sbjct: 753 KNYCIAV------KEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIARAKEIAEEL 806
Query: 743 QNNKHVERWSH-ENISAQDQQYKNA-------VEKMLAFDVLKGD 779
+ R IS+ Q+K ++++ FD +K D
Sbjct: 807 SDADITARAKEIAEISSNITQHKAVPKPDEVDMQQLTFFDTVKDD 851
>gi|296124289|ref|YP_003632067.1| DNA mismatch repair protein MutS [Planctomyces limnophilus DSM
3776]
gi|296016629|gb|ADG69868.1| DNA mismatch repair protein MutS [Planctomyces limnophilus DSM
3776]
Length = 891
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 265/564 (46%), Gaps = 62/564 (10%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
+EG S+ +++ VTPMG RLL W P+ + + +RLNA+S + SL E L
Sbjct: 304 REG-SLLWAIDQTVTPMGARLLLEWLSNPLKERTAIEARLNAVSELVVDLRTTQSLQEIL 362
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K DI + + + T D + +++ SLL K G +L +L D
Sbjct: 363 KTGYDIQRLTARIGTGR--ATPRDLVSLTRTL-SLLPQIKARLAGRRSTLLNELEA-KID 418
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
+ + I E A V E + + + G +R GF +LDE R + E++
Sbjct: 419 LHQDLREAI--EAALVDEPPLNLTE---------GGAIRPGFDPQLDEWRDLARGGKEWM 467
Query: 381 -----EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
EEV + L +F G+ + + D E ++
Sbjct: 468 AAYQAEEVRRTGIANLKVGFNRVF----------GFYLECSASQADKVPPEYIRKQTLKN 517
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
+ Y TP +E ++ + + + +E+ + DL + + L
Sbjct: 518 YER--------YITPALKEYEDKVLQAESRSIALEQQLFSDLRQKVSSRAAELRVTAESL 569
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL--QEMTVDTFIPNDTRID-NDG 552
A LD S A++A + Y+RP + EP+L+I+ GRH + Q + F+PND R+ ++G
Sbjct: 570 AVLDVLCSFAILATRRQYVRPEIASEPVLEIRQGRHPVLDQLLPTGGFVPNDIRLGGSNG 629
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
I +ITGPN +GKS YI+Q AL+ L+ IGSFVPA++A +GL D S + Q
Sbjct: 630 LIQLITGPNMAGKSTYIRQAALLTILTQIGSFVPAESARIGLADRIFARVGASDELGRGQ 689
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++ + +L AT+ SL +LDE G+GT T DGI L I F+ V +
Sbjct: 690 STFMVEMTETARILHSATASSLVILDEIGRGTSTYDGIS-LAWAITEFLHDAVGCRTFFA 748
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL KS +V E+N +D+VF++++VPG A SYG+H L
Sbjct: 749 THYHELTQLSASLKS----VMNWNVAVREHN----DDVVFMHQIVPGAADKSYGIHVGRL 800
Query: 725 AGVPAEVIKRAA---YVLEAAQNN 745
AG+P V+ RA VLEA Q +
Sbjct: 801 AGLPGVVLDRAREILKVLEAEQTD 824
>gi|333370923|ref|ZP_08462893.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332976873|gb|EGK13695.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 890
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 282/587 (48%), Gaps = 65/587 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+F+ LD +A + L++ ++ + GR KEG +++G++++ T MG RLL+ W +P
Sbjct: 281 EQFMVLDVSARQTLELTRSLRE------GR-KEG-TLYGLLDRTATAMGSRLLKKWLDKP 332
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+LDL + R I L+ + E LK V D+ + + S D +
Sbjct: 333 LLDLNEIRRRQEEIQALTDHLILLEEIREQLKGVYDLERLCARIAYGS--ANGRDLISLR 390
Query: 290 KSICSLLHVNK-IFEVGISE--SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+S+ + + + + E S S+ E L L ++VE A I E + V
Sbjct: 391 RSLEKIPDLKRCLSETNASALVSVAEGLDPLQ-EVVELTAKSIADEAP---------VSV 440
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G L+++G+ +ELD LR++ + ++ L Q + + +
Sbjct: 441 RE------GNLIKDGYDEELDRLREVQRDGRGWI-----TRLEQREREATGIRSLKVGFN 489
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + ++ L L + +R TP+ +E + L+ + K
Sbjct: 490 KVFGYYI-----EVTKANLRHLPEGRYQRKQTLANAERFV--TPELKERERLILEAEEKS 542
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+++E + + + + + A LD SLA V+ + Y+RP + E + I
Sbjct: 543 VELEYQLFTRVRERVAEEIPRIQMLADRVARLDALHSLAAVSGKYGYVRPDVNREGRIRI 602
Query: 527 QNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
GRH + E F+PNDTR+D + ++ +ITGPN +GKS Y++QVALI ++ IG
Sbjct: 603 TGGRHPVVEAATREGEFVPNDTRMDQEEHQLLLITGPNMAGKSTYMRQVALITLMAQIGC 662
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA A +G+ D + + +S+FM+++ + + L QATS+SL LLDE G+G
Sbjct: 663 FVPAQRAEIGIVDRIFTRIGAADDLVGGRSTFMVEMDETRLALAQATSRSLILLDEVGRG 722
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T T DG+ L + Y + V K L TH EL + E LP+ V+
Sbjct: 723 TSTYDGMALAHAIVEY-IHDHVGAKTLFSTHYHELTHLEADLPR----------VVNLHA 771
Query: 695 NSTDVE-DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ E ++VFL+R+ PG A SYG+H A LAG+PAEVI+RA +LE
Sbjct: 772 RCVEKEGEVVFLHRMEPGGADRSYGIHVAQLAGMPAEVIRRARSLLE 818
>gi|168702353|ref|ZP_02734630.1| DNA mismatch repair protein [Gemmata obscuriglobus UQM 2246]
Length = 861
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 177/612 (28%), Positives = 281/612 (45%), Gaps = 76/612 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ L LD +L++ +T + G S+ ++++ VTPMG RLL + L P
Sbjct: 252 DALLTLDEVTRRSLELTRTLRDNQRDG--------SLLSVLDRTVTPMGARLLHDSVLAP 303
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D +++RL+A+ L L S+ + L D+ + + ++ D A
Sbjct: 304 LTDATAISARLDAVEELLKDHALRQSVRDQLDACSDMQRLTTRVSTAK--AGPRDLAAIA 361
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITTELAYVYELVIGIIDVN 347
+++ L V S+ L++ + L DI E I + ++
Sbjct: 362 RTLRHLPAVKAKLTGRRSKLLQDLEKRLELCPDIRELLDKAIEDDPPHI----------- 410
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
+KE G ++R GF ELDELR + + ++ + E+ +
Sbjct: 411 -AKEGG---VIRPGFSAELDELRALTTDGKNWIARYQAQEITRT---------------- 450
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL----FYHTPKTRELDNLLGDIY 463
IG L + E +D LE E K L Y+TP RE + +
Sbjct: 451 GIGSLKVGYNE-IDGYYLEITNANETKTPPEYKHQKTLKNAKRYYTPALREYEEKVVTAQ 509
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K +E + L + + + LL A LD +LA +A NY+RP EP+
Sbjct: 510 DKSRALELQLFVTLRDQVAVQTPRLLNTAEVLAALDMLAALAELAAARNYVRPAFVEEPV 569
Query: 524 LDIQNGRHVL--QEMTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
LDI++GRH + Q + TF+PND +DG ++TGPN +GKS +++Q ALI ++H
Sbjct: 570 LDIRDGRHPVLDQILPPGTFVPNDVAFGPDDGMFWLVTGPNMAGKSTFLRQAALITLMAH 629
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
+GSFVPA +A VGLTD S ++ QS+FM+++ + +L AT++SL +LDE
Sbjct: 630 VGSFVPAKSAKVGLTDRIFTRVGASDELSRGQSTFMVEMTEAANILNNATARSLVILDEI 689
Query: 633 GKGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
G+GT T DG+ L Y + C + L TH EL LP RL+ Y +
Sbjct: 690 GRGTSTYDGVSLAWAMTEYLHDTLAC----RTLFATHYHELAQLAASLP---RLRNYNVL 742
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
V ++IVFL+++ PG+A SYG+H A LAGVP V+ RA VL + +
Sbjct: 743 V------RELADEIVFLHKIAPGNAERSYGIHVARLAGVPGSVLARATAVLGTLEKGHDL 796
Query: 749 ERWSHENISAQD 760
++A D
Sbjct: 797 SNVPAAPVAAPD 808
>gi|46446855|ref|YP_008220.1| DNA mismatch repair protein MutS [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697634|sp|Q6MBV4.1|MUTS_PARUW RecName: Full=DNA mismatch repair protein MutS
gi|46400496|emb|CAF23945.1| putative DNA mismatch repair protein mutS [Candidatus
Protochlamydia amoebophila UWE25]
Length = 858
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 195/716 (27%), Positives = 330/716 (46%), Gaps = 89/716 (12%)
Query: 47 YQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLI-YLRVTGM 105
Y+ P TS K +E S + T + V ++ F ++QA LI + +V +
Sbjct: 181 YRLHPAEFLTSEKFKEKHASLFEEMQQTY-SFLVNTLEDWQFEHQQAHDFLINHFKVQRL 239
Query: 106 DD-GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
D GLS G + A+G LL L+ E + ++ I S+
Sbjct: 240 DGFGLS--------------GMVAAINAAGALLNYLQ-ETLCLPIQH---------IQSI 275
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
S ++F+ LD L++ H G R ++ G++++ TPMG RL+ +
Sbjct: 276 RCYSSSQFMMLDRMTQRNLEL----THSLQDGSRR----HTLLGVIDQTQTPMGARLMHH 327
Query: 225 WFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
W +P+L + ++ R N I L E ++ L +KDI ++ K ++ T D
Sbjct: 328 WVKQPLLKVSEIHQRQNGIQALLNHEHIVDQLQNLFLQIKDIERLMMKVSA--CYATPRD 385
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
A S + + + SE + E + L D + K + I+ A V E + +
Sbjct: 386 LIALHFSFKPIAFIKSLLLNIPSEWINEHAQKL--DPLSKMNALISN--AIVEEPPLRL- 440
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC-- 402
G G R+GF ELDELR+I + ++ + + +E +
Sbjct: 441 --------GEGKTFRQGFHRELDELREISHDSKAWMARYQT-------QIREETGIKTLK 485
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
+ + GY + + ++D ++ ++ Y TP+ +E ++ +
Sbjct: 486 VGFNKMFGYFIEVSRGQIDKMPDHFIRRQTLVNAER--------YITPELKEYESKVLTA 537
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
+I +E + L + ++ ++L+ A++DC +SL VA + Y P++
Sbjct: 538 EERINSIESELFHQLRLEVASYTKNVLEVAQALAKIDCLISLTNVAKKYCYTCPVIDDSS 597
Query: 523 LLDIQNGRHVLQEMTV--DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLS 579
+L I+ GRH + E + FIPNDT +D+ R+ +ITGPN +GKS Y++QVALIV L+
Sbjct: 598 ILVIEEGRHPVIETVCRHEKFIPNDTYLDDQANRLLLITGPNMAGKSTYLRQVALIVILA 657
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +G+ D S ++ QS+FM+++ + +L ATSQSL +LDE
Sbjct: 658 QIGSFVPAAKAHIGIIDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATSQSLVILDE 717
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
G+GT T DGI + Y +T + K L TH EL E +P + Y ++V
Sbjct: 718 IGRGTSTYDGISIAWSVAEYLLTTEKRMAKTLFATHYWELTKLEEKVPGAVN---YNVAV 774
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+++ I FL +++ G SYG+H A LAG+P V+ R+ +LE + N
Sbjct: 775 HEADDH------ITFLRKIIKGGTDKSYGIHVARLAGLPQAVLNRSKEILEHLEEN 824
>gi|448624279|ref|ZP_21670352.1| DNA mismatch repair protein MutS [Haloferax denitrificans ATCC
35960]
gi|445750246|gb|EMA01685.1| DNA mismatch repair protein MutS [Haloferax denitrificans ATCC
35960]
Length = 930
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 208/774 (26%), Positives = 348/774 (44%), Gaps = 117/774 (15%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P + +
Sbjct: 117 QFLAAVVTAGDGVGLAFADITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPDL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
S++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 SDDETLSRLREA---TDA-SFSLFSTEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELIET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKS 291
L RL+A+ + + E L D+ + + S S + + D + L +
Sbjct: 312 LARRLDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASDLLSVRDTLSVLPA 371
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + ++ + ++E + R D+ + + LA + K
Sbjct: 372 LADAIEGTELADSPLAEVVSRPDRDAAADL----RADLDDSLAE-----------DPPKT 416
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI 409
G L + G+ D+LD+L + +E +L+ +A E L H+ + YI Q+
Sbjct: 417 VTQGGLFQTGYDDDLDDLIERHESAKSWLDTLADREKRAHGLSHVTVDRNKTDGYYI-QV 475
Query: 410 GYLMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
G + +++ D TL+ + F T+ L + L+ GD+ +
Sbjct: 476 GKSVA---DQVPDHYRQIKTLKNSKRFV---------TEELEEKEREILRLEEARGDLEY 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ + +L + ++ L AE+D SLA A N + RP LT L
Sbjct: 524 ELFE-------ELRERVAQHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTDAGAL 576
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T D F+PND R+D+D I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 577 DIEAGRHPVVETTTD-FVPNDLRMDDDRGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 635
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 636 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 695
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 696 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERD 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 750 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLREEKAIE 799
>gi|294793674|ref|ZP_06758811.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
gi|294455244|gb|EFG23616.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
Length = 877
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 292/602 (48%), Gaps = 64/602 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A+S + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDINQIQRRQAAVSELITRGAERSHIRNFLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---AYVY 337
+ D TA +S+ L + + G SL A + I + +Y
Sbjct: 363 SPRDLTALRESLAVLPDIKNVL--GTCSSL--------------ALTSINERMQDHKDIY 406
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 407 DLLCRAITEQPALTLKDGRVIKDGFNADLDELRSLATNSEQWLAKMEA-DIKEATGLSK- 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
Y GY + K EQ+ + F +R Y TP+ +E +
Sbjct: 465 ---IKTGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEI 513
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ KI+ +E + + L + I L + + A+LD SLALV ++ NY+ P
Sbjct: 514 KILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSLALVGYEENYICPT 573
Query: 518 LTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVAL 574
+ + ++I++GRH + E + + F+PND ++ +D +ITGPN +GKS Y++Q A+
Sbjct: 574 IVMNGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDDEEFLLITGPNMAGKSTYMRQAAI 633
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ ++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL
Sbjct: 634 LMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSL 693
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFY 685
+LDE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK Y
Sbjct: 694 IILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHSKTLFATHYHELI---CLEESYSKLKNY 749
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T++V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++
Sbjct: 750 TVAV------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQ 803
Query: 746 KH 747
H
Sbjct: 804 SH 805
>gi|187734854|ref|YP_001876966.1| DNA mismatch repair protein MutS [Akkermansia muciniphila ATCC
BAA-835]
gi|187424906|gb|ACD04185.1| DNA mismatch repair protein MutS [Akkermansia muciniphila ATCC
BAA-835]
Length = 823
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 285/590 (48%), Gaps = 64/590 (10%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R S+ G +++ TPMG R LR+W L P+ DLE L +R I+ L LM+ L E
Sbjct: 264 RGGVKLSLLGTLDRTSTPMGARKLRDWLLHPLCDLEKLLARQEVIAVLLQEPYLMSKLRE 323
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL- 317
+LK V+D+ + + + + A D A S+ + +LR+ L L
Sbjct: 324 SLKNVRDMERLTGRISQGAG--NARDLQALASSLARI------------PALRDDLESLP 369
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D++E S + V L ++D K G ++REG+ LDELR +
Sbjct: 370 GGGDMLESIRSRMGCFDELVDLLQRALVDEPPVTIK-EGGIIREGYHAGLDELRLASRDG 428
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
E+L + E K + I + + GY + + + D + ++
Sbjct: 429 KEWLARLQEKER-------KRTGIDSLKIRFNNVFGYYIEVTKSHYDKVPPD----YQRK 477
Query: 435 FSDMDGETKRLFYHTPKTRELDN--LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
+ ++ E + TP+ ++++N L D + ++ E+ + L + D +
Sbjct: 478 QTLVNAER----FITPELKQMENTILGADERSRQVEYEQFLL--LREEVGRHIDDIQITA 531
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRID- 549
+ A+LD L LA A Q Y RP+L L I NGRH + Q ++ D F+PND ++
Sbjct: 532 DAMADLDVLLGLAEGAQQYRYCRPVLDNSMTLRIVNGRHPVIEQNVSGDVFVPNDAFLEP 591
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
+ R+ ++TGPN +GKS YI+QVALI ++ IG++VPA++A +GL D S +
Sbjct: 592 EENRLILLTGPNMAGKSTYIRQVALITLMAQIGAYVPAESAHIGLVDRIFCRVGASDDLA 651
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
QS+FM+++ + ++L AT +SL +LDE G+GT T DG+ + Y ++ +
Sbjct: 652 RGQSTFMVEMSETSLILNNATERSLIILDEIGRGTATFDGLSIAWAVAEYLHD-ELKSRT 710
Query: 662 LVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
L TH LT+L N + ++ Y ++V + E+IVFL ++VPG A SYG
Sbjct: 711 LFATHYHELTDLAN-----SRQGVQNYNVAVREWK------EEIVFLRKIVPGAADKSYG 759
Query: 719 LHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVE 768
+ A LAG+PA ++ RA +L + N R + A+ + +E
Sbjct: 760 IQVARLAGMPAVIVDRAKAILSHLEMNSTRPRRKERSRLAEPRAKNTDME 809
>gi|298242708|ref|ZP_06966515.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
gi|297555762|gb|EFH89626.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
Length = 893
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/596 (28%), Positives = 289/596 (48%), Gaps = 68/596 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ ++ LDA L++ Q + S G S+ G++++ +TPMG R +R +P
Sbjct: 258 SSYMVLDAHTQRNLELLQGTRSGSVQG--------SLLGVLDRTITPMGAREMRKTITQP 309
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+LDL L++RL ++ S L + +L+ D+ I + + + L
Sbjct: 310 LLDLNELDARLGSVEELFESPALRSRFTMSLQVFSDMERIAGRIRQGTAV-----RNEVL 364
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID--VN 347
+L HV ++ E+ LR LL ++ E+ C + VI ++D +
Sbjct: 365 GLRDNLEHVPELREL-----LRGCEALLLRELAEEMQDC---------QEVIDLVDRALM 410
Query: 348 RSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
RS E+ G L+R+G+ ELDEL + + + + SLE + + +
Sbjct: 411 RSGEEDEHGDDGRLIRQGYDTELDEL---FASIRDSRRWMVSLEGRERERTGIKSL--KV 465
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
+ GY + ++ + L+ + G ++ +R TP+ +E + +
Sbjct: 466 GFNKVFGYYI-----EVSNANLKLVPG-DYMRKQTLVNAERFI--TPELKEHEARILSAV 517
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
+I +ME+ + +++ I ++ L A +D LS A+VA Y RP L
Sbjct: 518 ERIEEMEKGLYGEVLRQISVYYAQLAHTARLVARVDVLLSFAVVAVHQGYTRPQLEQGHG 577
Query: 524 LDIQNGRHVLQEMTVD--TFIPNDTRIDND--GRINIITGPNYSGKSIYIKQVALIVFLS 579
+DI++GRH + E +D FIPNDT+++ D RI ++TGPN +GKS Y++QVALI ++
Sbjct: 578 IDIRDGRHPVVEYALDGDVFIPNDTQMEADEGRRIMLLTGPNMAGKSTYLRQVALITLMA 637
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A +G+ D + A +S+FM+++ + G +L AT SL +LDE
Sbjct: 638 QIGSFVPARQARIGVVDRIFTRVGAEDDIAAGKSTFMVEMEETGTILHHATPHSLLILDE 697
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLR 691
G+GT T DG+ + + + + + L TH EL + L + M++
Sbjct: 698 IGRGTSTYDGLAIARAVVEHL-HSRLKARTLFATHYHEL--AALAEELPHLCVHAMAISD 754
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA---YVLEAAQN 744
+ +++ IVFL+++V G A SYG+H A LAG+P +++RA Y LE Q
Sbjct: 755 EDEHAS----IVFLHKVVEGSAGKSYGVHVARLAGMPMSIVERAEEILYQLEEGQQ 806
>gi|385825393|ref|YP_005861735.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii DPC 6026]
gi|417837009|ref|ZP_12483249.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii pf01]
gi|329666837|gb|AEB92785.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii DPC 6026]
gi|338762688|gb|EGP13955.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii pf01]
Length = 857
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 278/584 (47%), Gaps = 61/584 (10%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L + + R + L + ++LK V D+ + + + + + L+
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRI-----AFGSVNAREMLQ 358
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
SL + +I + S L N+ A I L +++L++ I N
Sbjct: 359 LAHSLGAIPEILNALLETS---NPHLQNY------AKQIDP-LKGIHDLIVNTIVDNPPL 408
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQ 408
G L+REG ++LD R ++L E+ S E+ + +L + Y
Sbjct: 409 PTTEGGLIREGVSEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------VGYNKV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + ++ ++ T Y TP +E + L+ + K
Sbjct: 462 FGYYIEVTNSNKSKVPTDR-------YTRKQTLTNAERYITPDLKEHEALILEAEAKSTG 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEPLLDIQ 527
+E + L + + L K A LD + A V+ QNNY+RP +T + +++
Sbjct: 515 LEYDLFVKLREDVKKYIPALQKLAKQIASLDVLTNFATVSEQNNYVRPNFVTDKQEINVV 574
Query: 528 NGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++ IGSFV
Sbjct: 575 NGRHPVVEQVMTAGSYIPNDVKMDQDTNIFLITGPNMSGKSTYMRQMALIAIMAQIGSFV 634
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 635 PADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTA 694
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLRPENNS 696
T DG+ L G + Y V K L TH EL + + LK + V E N
Sbjct: 695 TYDGMALAGAIVKYL-HDKVGAKTLFATHYHELTD-----LDQTLKHLKNIHVGATEENG 748
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 749 K----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|291542654|emb|CBL15764.1| DNA mismatch repair protein MutS [Ruminococcus bromii L2-63]
Length = 859
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 175/621 (28%), Positives = 303/621 (48%), Gaps = 92/621 (14%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N+++ LD L++ QT + + K+G S+ +++K T MG+RL+R+W P
Sbjct: 258 NQYMSLDYNTQRNLELTQT-------MLTKDKKG-SLLWVLDKTKTAMGKRLMRSWLEHP 309
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L++ ++N+R +AI + L + +TL + DI ++ + +Y +++ L
Sbjct: 310 LLNITSINNRQSAIEELVNDNMLRMDVTDTLSGIFDIERLMTRI-----VYGSANARD-L 363
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY------ELVIGI 343
+S+C G ++L + LL C + L Y+Y E + +
Sbjct: 364 RSLC-----------GAIQNLPQISDLL--------VDCKSVYLKYIYKSIDKLEDIHSL 404
Query: 344 IDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKE 397
ID +E + G +++ G+ +ELD + + L E ++ +P L K
Sbjct: 405 IDSAIVEEPPFTVREGGMIKRGYNEELDSVTGDMNDSKGILARIEAEQRDITGIPKL-KV 463
Query: 398 MFVPCIVYIHQIG--YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+ Y ++ Y + E + TL + + D+ R+ ++ L
Sbjct: 464 GYNRVFGYYIEVSNSYKSMVPETYIRKQTLTNCE--RYITQDLKDVEGRILGAKDRSVAL 521
Query: 456 D-NLLGDIYHKILD-MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
+ NL D+ + D +ER + K A LD SLA VA N Y
Sbjct: 522 EYNLFDDVRKTVSDNLER----------------IQKTAKAIANLDVITSLANVAADNRY 565
Query: 514 MRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRIDN-DGRINIITGPNYSGKSIYIK 570
+RP + L + I++ RH V++ + D F+PND +D+ + R+ IITGPN +GKS Y++
Sbjct: 566 IRPDVNLSTAIRIKDSRHPVVEALLKDAPFVPNDVSLDSANDRVAIITGPNMAGKSTYMR 625
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+A+IV ++ IGSFVPA +A +G+ D S + + QS+FM+++ +V +++ AT
Sbjct: 626 QIAIIVLMAQIGSFVPASSAEIGIVDSIFTRVGASDDLASGQSTFMVEMSEVANIIKNAT 685
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTEL-LNEGCLPKSE 680
S+SL +LDE G+GT T DG+ + + + + K L TH EL + E L +
Sbjct: 686 SKSLLILDEIGRGTSTFDGMSIARAVLEFCADRKKLGAKTLFATHYHELTVMEQLL---D 742
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+K Y ++V + +DI FL R+VPG A SYG+ A LAG+P VI RA +L+
Sbjct: 743 GVKNYNIAVKKRG------DDITFLRRIVPGGADDSYGIEVAKLAGIPQSVISRAKEILK 796
Query: 741 AAQNNKHVERWSHENISAQDQ 761
++ K+ + + NI QD
Sbjct: 797 DLEHGKY--KKENANIQKQDN 815
>gi|435852399|ref|YP_007313985.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
gi|433663029|gb|AGB50455.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
Length = 886
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 277/561 (49%), Gaps = 51/561 (9%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ ++++ TPMG R+L+ W L+P++ + +N RL+A+ + + L YVK
Sbjct: 294 SLLKILDQTSTPMGGRMLKKWLLKPLISVSEINERLDAVEELSGKTLVRFDVRSHLAYVK 353
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE-VGISESLREQLRLLNFDIVE 323
DI ++ + +Y S+ + S+ V + + VG S R L DI+E
Sbjct: 354 DIERLVGRV-----MYGNSNARDLVALKLSMEAVPLLIQCVGDDVSSR-----LIRDIIE 403
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
+ EL + EL+ I G ++R G+ ELD+L+ + +++ +
Sbjct: 404 ELQGF--EELNSLVELIGKAIAEEPPLSVREGGMIRPGYNTELDKLKDLSHNGKKWVADF 461
Query: 384 ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK 443
KE I + ++GY +F L+ T+ Q +
Sbjct: 462 QQ----------KERERTGIKSL-KVGY-NRVFGYYLEVTSSNSSQVPDDYIRKQTMVNA 509
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
FY TP+ +E++ + K +E + ++ + + +S L +A + D ++
Sbjct: 510 ERFY-TPELKEMETSILTADEKAHALEHELLNEVNATVASYSRQLQRAAFLIGQFDVLVN 568
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPNDTRID-NDGRINIITGPN 561
LA VA NN++RP +T + + I++GRH + E TV F+PNDT ID D + +ITGPN
Sbjct: 569 LAEVAVHNNFIRPAVTSDCRILIRDGRHPVVESTVPGGFVPNDTEIDCEDNQFLLITGPN 628
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQ 613
+GKS Y++Q ALIV ++ +GSFVPA A++G+ D + + QS+FM+++ +
Sbjct: 629 MAGKSTYMRQTALIVIMAQVGSFVPASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVE 688
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTH---LTE 669
+ +L +T +SL LLDE G+GT T DG + + Y V + + TH LTE
Sbjct: 689 LANILNNSTPKSLLLLDEIGRGTSTYDGYSIAKAVVEYIHNKSKVGVRSMFATHYHQLTE 748
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L EG L +R+K ++V + +D+VFL ++VPG SYG+H A LAGVP
Sbjct: 749 L--EGTL---KRVKNLHIAV------KEEGDDLVFLRKIVPGATDRSYGIHVARLAGVPH 797
Query: 730 EVIKRAAYVLEAAQNNKHVER 750
V RA VL ++ + R
Sbjct: 798 AVTSRAKEVLREIESESAINR 818
>gi|159900591|ref|YP_001546838.1| DNA mismatch repair protein MutS [Herpetosiphon aurantiacus DSM
785]
gi|159893630|gb|ABX06710.1| DNA mismatch repair protein MutS [Herpetosiphon aurantiacus DSM
785]
Length = 928
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 183/673 (27%), Positives = 311/673 (46%), Gaps = 81/673 (12%)
Query: 130 VRASGGLLAVL-ENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
RA+G L+ L E +R D++ Q + S+ +F+ LD L++ +
Sbjct: 269 TRAAGALIQYLHETQR--DSVAQ---------VRSLRVYDTTRFMFLDPQTRRNLELTE- 316
Query: 189 DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC 248
G G ++G S+ ++++ TPMG RLLR W +P+++L L R A+S F+
Sbjct: 317 -------GAGGQRKG-SLIAVLDQTRTPMGARLLRQWISQPLIELGPLTERQQAVSCFVE 368
Query: 249 SEELMASLHETLKYVKDIPH----ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ L K V DI +++ +P + + I S + +
Sbjct: 369 ETLVRGELRALFKGVGDIERTINRVVQGIATPRDLVRLREALRLTPDILSQIERTGLRST 428
Query: 305 GISESLREQLRLLN-------FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+E+ L + D + +A ++G D RS E +
Sbjct: 429 SPTEAAPSDDDLFDDEPTSNQIDACADICELLEQAIADDPPALLGTWDNARSDE----NV 484
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF- 416
+R+G E+D + + + ++ E+ + E Q K + V Y GY + +
Sbjct: 485 IRKGHAAEIDAIVEATRDAARWINELEAKE--QQRTGIKTLKVS---YNKVFGYYIEVTK 539
Query: 417 ---EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
E ++ D + + + ++ E Y TP+ +E ++L+ + + + ER
Sbjct: 540 ASGETRIPDDYIRKQ-------TLVNAER----YITPELKEYESLILNASEALNEKERQA 588
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
R ++ H+ + LL AE D + +LA VA + ++RP L L+ + IQ GRH +
Sbjct: 589 FRLILRHLANAGNRLLDLARAIAEFDVYSTLAEVAVRQRFVRPTLRLDDVFVIQGGRHPV 648
Query: 534 QEMTV-DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
E + + F PND D D +I ++TGPN SGKS +++QVALI ++ IGSFVPAD A +
Sbjct: 649 VEHNLNEPFTPNDAHFDADHQIIVLTGPNMSGKSTFLRQVALIGLMAQIGSFVPADYAEI 708
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
GL D + QS+FM+++ + +L + +SL +LDE G+GT T DG+ +
Sbjct: 709 GLLDRIFTRIGAQDDIATGQSTFMVEMIETANILHNGSPRSLIILDEIGRGTSTYDGLSI 768
Query: 645 LGGTINYF-VTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE 700
+ Y + K L TH LTEL N LP R+ +T++V + + +
Sbjct: 769 ARAVVEYIHNQPRLRAKTLFATHYHELTELAN--ILP---RVHNWTLAV------AEEGD 817
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQD 760
+VFL +++ G A SYG+H A +AG+P VIKRA VL + E+ E + +
Sbjct: 818 HVVFLRKVIEGAADRSYGIHVAQMAGLPPAVIKRATEVLSELEGKGDREQ-RREAMRRMN 876
Query: 761 QQYKNAVEKMLAF 773
+AV +M F
Sbjct: 877 AAGSSAVPQMSLF 889
>gi|345858097|ref|ZP_08810510.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
gi|344328902|gb|EGW40267.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
Length = 850
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 267/548 (48%), Gaps = 51/548 (9%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++ T G RLL++W +P+L + + RLNAI L L + L V
Sbjct: 274 TLLSVLDLTQTAFGGRLLKHWIDKPLLSQDEIERRLNAIEELTSDSFLRKDLFKLLSEVY 333
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ ++ K + + A D + +++ L + + +E+L+ + + + ++
Sbjct: 334 DLERLMGKVSYGT--ANAKDLLSLAQTLALLPEIRTLITASSAETLK--IHAPHLEGLDS 389
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
S + + L L + R G +++ G+ E+DELR I E+ VA
Sbjct: 390 FVSKLQSALNPTPPLSL------RD-----GNIIKTGYSQEVDELRYIASGGKEW---VA 435
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEK--LDDTTLEQLQGFEFAFSDMDGET 442
LE + I Y GY + I L T ++ Q A
Sbjct: 436 QLENAERERTGIRSL--KIGYNKVFGYFIEITHANAHLIPTDYQRKQTLSNA-------- 485
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
+R TP+ +E + + K+ D+E + L + + +L+ AE+D F+
Sbjct: 486 ERFI--TPELKEYEQKIIGAEEKLKDLEYELLLALREDVRTHTKAILQVAQVLAEVDVFV 543
Query: 503 SLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGP 560
SLA VA +N+Y+RP + + I GRH + E ++ F+PNDT++ + +ITGP
Sbjct: 544 SLAEVAVRNHYVRPQIKHNGEIVIIEGRHPVVEQMLEPGVFVPNDTQMSESHHLALITGP 603
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLH 612
N +GKS Y++QVALIV ++HIGSFVPA A++ D S + A QS+FM+++
Sbjct: 604 NMAGKSTYMRQVALIVLMAHIGSFVPAKKASIAQVDRIFTRVGASDDLAAGQSTFMVEMQ 663
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELL 671
+V +LR ATS+SL +LDE G+GT T DG+ + + + PK L TH EL
Sbjct: 664 EVAHILRYATSKSLIILDEIGRGTATFDGLSIAWAVAEHLIQSQGFNPKTLFATHYHELT 723
Query: 672 NEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
+ E + + + V E EDIVFL++++PG A SYG+ A LAG+P E+
Sbjct: 724 QL----QDEFPRLFNLHVGVKERG----EDIVFLHKILPGKADRSYGIQVARLAGLPPEL 775
Query: 732 IKRAAYVL 739
++RA +L
Sbjct: 776 LQRAKTLL 783
>gi|265752670|ref|ZP_06088239.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_33FAA]
gi|345514265|ref|ZP_08793778.1| DNA mismatch repair protein mutS [Bacteroides dorei 5_1_36/D4]
gi|229437245|gb|EEO47322.1| DNA mismatch repair protein mutS [Bacteroides dorei 5_1_36/D4]
gi|263235856|gb|EEZ21351.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_33FAA]
Length = 870
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 253 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 301
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 302 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 361
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 362 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 417
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 418 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 462
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 463 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 507
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A VA +NNY
Sbjct: 508 EYEEKILGAEDKILVLETKLYNELVIALAEFIPAIQINANQIARLDCLLAFANVARENNY 567
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ +I IITGPN +GKS +
Sbjct: 568 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 627
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 628 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 687
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 688 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 744
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 745 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 798
>gi|395240975|ref|ZP_10417997.1| DNA mismatch repair protein mutS [Lactobacillus gigeriorum CRBIP
24.85]
gi|394475483|emb|CCI87974.1| DNA mismatch repair protein mutS [Lactobacillus gigeriorum CRBIP
24.85]
Length = 868
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 279/586 (47%), Gaps = 61/586 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F ++++ T MG RLL+ W R
Sbjct: 250 VNQYLQMTHTVQNNLELVASAKTGKKMG--------SLFWVIDQTHTAMGARLLKQWLAR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+ E ++ R + L ++ ++LK V D+ + + + + +
Sbjct: 302 PLLNYEQISYRQEMVQALLDEYFTRETVIDSLKGVYDLERLTGRIS-----FGNVNAREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + +++S N D+++ A I L V E + I +
Sbjct: 357 LQLARSLNSVPAILQ-ALTDS--------NNDVLKNFAKEINP-LTGVAEQITSTIVADP 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYI 406
G L++ G +LD R ++L E+ + E + + +L + Y
Sbjct: 407 PVLTTEGGLIQTGVNSQLDRYRDAMNNGKKWLAEMEADERAKTGIDNLK-------VGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + L++ F+ T Y TP+ +E +NL+ + +
Sbjct: 460 KVFGYYIQVSNGNKNKVPLDR-------FTRKQTLTNAERYITPELKEHENLIMEAQTRS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL-EPLLD 525
D+E I +L I + L K A LD F A VA QNNY RPI +
Sbjct: 513 TDLEHGIFVNLRDEIKKYIPELQKLGGQLAALDIFAGFAQVAEQNNYCRPIFHRGRHDIK 572
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH + E M ++IPND +D D I +ITGPN SGKS Y++Q+ALI ++ +GS
Sbjct: 573 VVAGRHPVVEKVMPAGSYIPNDIEMDEDTNIYLITGPNMSGKSTYMRQMALIAVMAQVGS 632
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD A + + D + + + QS+FM+++ + L+ AT++SL L DE G+G
Sbjct: 633 FVPADEAELPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATNRSLVLFDEIGRG 692
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T T DG+ L G + Y + V K L TH EL E L +K + V E
Sbjct: 693 TATYDGMALAGAIVKY-LHDKVGAKTLFATHFHELTGLETSL-----IKLKNIHVGATEE 746
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 747 NG----KLIFLHKILPGPADQSYGIHVAQLAGLPNKVLREAEKLLK 788
>gi|237709143|ref|ZP_04539624.1| DNA mismatch repair protein [Bacteroides sp. 9_1_42FAA]
gi|423240802|ref|ZP_17221916.1| DNA mismatch repair protein mutS [Bacteroides dorei CL03T12C01]
gi|229456839|gb|EEO62560.1| DNA mismatch repair protein [Bacteroides sp. 9_1_42FAA]
gi|392643764|gb|EIY37513.1| DNA mismatch repair protein mutS [Bacteroides dorei CL03T12C01]
Length = 883
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 266 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 314
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 315 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 374
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 375 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 430
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 431 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 476 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 520
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A VA +NNY
Sbjct: 521 EYEEKILGAEDKILVLETKLYNELVIALAEFIPAIQINANQIARLDCLLAFANVARENNY 580
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ +I IITGPN +GKS +
Sbjct: 581 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 640
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 641 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 700
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 701 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 757
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 758 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 811
>gi|310778160|ref|YP_003966493.1| DNA mismatch repair protein MutS [Ilyobacter polytropus DSM 2926]
gi|309747483|gb|ADO82145.1| DNA mismatch repair protein MutS [Ilyobacter polytropus DSM 2926]
Length = 869
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 197/761 (25%), Positives = 343/761 (45%), Gaps = 114/761 (14%)
Query: 4 YMACI-LHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ C+ + G R G++Y D + + E+ D L ++ ++ P I KS E
Sbjct: 126 YLLCVYIKGDRAGIAYVDITTGEFKTTELEGDDIISKALNEV--HKISPNEIIVEEKSYE 183
Query: 63 SFLSALKRSDGTTE--APTVKLVKSSIFSYEQAWHRLIYLRVTGMDD-GLSIKERICYLN 119
++ K +E V VK+S E+ Y RV +D GL K+
Sbjct: 184 NYADKFKNYAAISELTMQKVSFVKNS----EEILKD--YFRVISLDSYGLQGKKEAVAAG 237
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
+M L +LE ++ + + I+ + + + ++L+ T
Sbjct: 238 AM-------------ALEYILELQKCNE-----------LPINKISYENSEEHMELNLTT 273
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
+ L++ + S++G ++ +++ C T MG R+L+++ P+L +E + R
Sbjct: 274 QKNLELIHNQREKSNLG--------TLLWVLDSCKTSMGTRMLKSYIKNPLLKVEEIEKR 325
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVN 299
I +F+ + + E LK + DI ++ K + D A KSI L +
Sbjct: 326 QEDIGYFIDEVLIREEIREILKNIYDIERLIGKVIMGT--ENGRDLIALKKSIRGALEIL 383
Query: 300 KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
KI +L + D+ +L VY L+ I+ G +++
Sbjct: 384 KILG---------NRQLFDSDL---------EKLIEVYNLIEKSINEEPPFSVREGGMIK 425
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLM------ 413
G+ ELD+L I + ++ ++ + E + K + V Y GY +
Sbjct: 426 GGYNSELDDLHDISKSGKNYILDIETREREKTG--IKNLKVK---YNKVFGYFIEVTRAN 480
Query: 414 --CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ EE + TL T Y TP+ ++ ++ + + KI +E
Sbjct: 481 SALVPEEYIRKQTL----------------TNAERYITPELKDYESKVLNAKEKIEALEY 524
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
I +D+ S I + + A LD SL+ VA +NNY++P + ++I+ GRH
Sbjct: 525 QIFKDISSEIKEENRVFQELAQNLAYLDVVTSLSDVAIKNNYVKPEVFEGFSMEIKGGRH 584
Query: 532 VLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
+ E V F+ ND +D+D I I+TGPN +GKS Y+KQ+ALI+ ++ IGS+VPA+
Sbjct: 585 PIVEKLVGPGEFVKNDILLDDDKSIIILTGPNMAGKSTYMKQLALIILMAQIGSYVPAEF 644
Query: 590 ATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +G+ D S + + QS+FM+++ +V ++ AT +S +LDE G+GT T DG
Sbjct: 645 AKIGIVDKIFTRVGASDDLVSGQSTFMVEMSEVANIVNNATEKSFVILDEVGRGTSTFDG 704
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVE 700
I + +I ++ + K + TH EL EG L K+E Y + V EN
Sbjct: 705 IS-IASSITEYIHDKIGSKTVFATHYHELTELEGKLEKAEN---YRIEVKETEN------ 754
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
D+VFL +V G A SYG+ A LAG+P E++ ++ L++
Sbjct: 755 DVVFLREIVKGGADKSYGIEVARLAGLPREILNKSKATLKS 795
>gi|452995322|emb|CCQ93092.1| DNA mismatch repair protein MutS [Clostridium ultunense Esp]
Length = 871
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 173/643 (26%), Positives = 323/643 (50%), Gaps = 60/643 (9%)
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G + ++L +++D L + + + I+ + + ++++ LD L+I +T
Sbjct: 234 GKMYSILSTGKLIDYLYETQKDSLK-HINGIEFYNTDEYMVLDINTRINLEIHET----- 287
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
+ R K+G ++ +++K T MG RLL++W +P+++++ + R N + F+ LM
Sbjct: 288 --IMTREKKG-ALIWLLDKTSTAMGGRLLKSWLEQPLINIKEIEKRQNMVQLFVNDIILM 344
Query: 254 ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
+ LK + D+ ++ K + + A D + SI + + K+ + ES +++
Sbjct: 345 DQVKNCLKNIYDLERLIGKISYGNC--NARDLFSLKISIGMIPKLKKL----LLESNKKE 398
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
L +I L VY+L+ I N G L++ GF LDEL++
Sbjct: 399 FIRLGMEI---------DPLKDVYQLLDSSIVDNPPISVKEGGLIKLGFDKTLDELKKAS 449
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
E ++L LE+ + + I + + GY FE + ++ + + +
Sbjct: 450 IEGKQWL---TKLEMEEKKKTGIKNL--KIGFNKKSGYF---FE--VTNSNINLVPNY-- 497
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
F T Y+T K +E++ + +I+++E I +++ + + ++ + +
Sbjct: 498 -FIRRQTLTNSERYYTDKLKEIETKILGAEDRIVEIEYNIFQEIRDKVKMQTNRIQRVSK 556
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT-VD-TFIPNDTRIDN- 550
+++D S A VA++NNY++P L + +++I GRH + E T VD TF+PNDT IDN
Sbjct: 557 LISKIDVLNSFAQVAYRNNYVKPRLNNKGIINIIEGRHPVVETTLVDGTFVPNDTYIDNK 616
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
D RI IITGPN +GKS Y++QVA+I ++ IGSF+PA A + + D S +++
Sbjct: 617 DNRIQIITGPNMAGKSTYMRQVAIITLMAQIGSFIPAKEADICIVDRIFTRIGASDNLSQ 676
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++++V ++ AT SL +LDE G+GT T DG+ + I + + ++ K L
Sbjct: 677 GESTFMVEMNEVANIIENATEDSLIILDEVGRGTSTYDGLSIAWSVIEH-IAENIRSKTL 735
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH EL+ K + +++L E ++++FL ++V G SYG+ A
Sbjct: 736 FATHYHELIELEDNIKGVK----NLTILVEEKG----DEVIFLRKIVKGSTNKSYGIQVA 787
Query: 723 LLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKN 765
LAG+ +I RA +L + N + S+ NI + Q N
Sbjct: 788 KLAGIDKRIINRANEILFQIEEN---HKSSNSNIPLDNNQQLN 827
>gi|416999073|ref|ZP_11939742.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
gi|333977226|gb|EGL78085.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
Length = 877
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 292/602 (48%), Gaps = 64/602 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A+S + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDINQIQRRQAAVSELITRGAERSHIRNFLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---AYVY 337
+ D TA +S+ L + + G SL A + I + +Y
Sbjct: 363 SPRDLTALRESLAVLPDIKNVL--GTCSSL--------------ALTSINERMQDHKDIY 406
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 407 DLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSEQWLAKMEA-DIKEATGLSK- 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
Y GY + K EQ+ + F +R Y TP+ +E +
Sbjct: 465 ---IKTGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEI 513
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ KI+ +E + + L + I L + + A+LD SLALV ++ NY+ P
Sbjct: 514 KILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSLALVGYEENYICPT 573
Query: 518 LTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVAL 574
+ + ++I++GRH + E + + F+PND +++D +ITGPN +GKS Y++Q A+
Sbjct: 574 IVMNGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDEEEFLLITGPNMAGKSTYMRQAAI 633
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ ++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL
Sbjct: 634 LMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSL 693
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFY 685
+LDE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK Y
Sbjct: 694 IILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHSKTLFATHYHELI---CLEESYSKLKNY 749
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T++V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++
Sbjct: 750 TVAV------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQ 803
Query: 746 KH 747
H
Sbjct: 804 SH 805
>gi|331269502|ref|YP_004395994.1| DNA mismatch repair protein MutS [Clostridium botulinum BKT015925]
gi|329126052|gb|AEB75997.1| DNA mismatch repair protein MutS [Clostridium botulinum BKT015925]
Length = 895
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 292/581 (50%), Gaps = 57/581 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
+L +D + L++ +T + +AK+G S+ +++K T MG RLLR W +P++
Sbjct: 259 YLSIDINSRRNLELTETLRD-------KAKKG-SLLWVLDKTTTAMGGRLLRKWVEQPLI 310
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ R NA+ + + L + E L+ V DI + K +S + A + + S
Sbjct: 311 QKYIIEMRQNAVEEIMNNVPLCDDVRENLRDVYDIERLAGKISSKNV--NAKELLSLKNS 368
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
I +L +++ L+ N D+++ + L +Y L+ I + S
Sbjct: 369 IGNL------------PAIKSLLKNFNSDLLKNIYDKLDC-LEDIYSLLDNAILASPSLS 415
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G+ +DELR ++ +ASLE + + + Y GY
Sbjct: 416 IKEGGIIKDGYNSIIDELRMAKSHGKQW---IASLE--EQERTLTGIKSLKVKYNKVFGY 470
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I + LD Q+ + +R Y TP+ +E++ + K++++E
Sbjct: 471 YIEITKSNLD-----QVPENRYIRKQTLANCER--YITPELKEVEEKILGAQEKLMELEY 523
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ ++ I + + +E+D SLA+VA +NNY +P + L I+ GRH
Sbjct: 524 NLFIEIRDRIEKEIYRIKGSAKLISEIDVLGSLAVVALENNYCKPEIKTIGELYIKEGRH 583
Query: 532 VLQEMTV--DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + D+F+ NDT +DN D ++ +ITGPN +GKS Y++QVALI L+ IGSFVPA
Sbjct: 584 PVVEKMIPRDSFVSNDTVLDNKDQQLLLITGPNMAGKSTYMRQVALINVLAQIGSFVPAK 643
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
A+V + D S + +S+FM+++ +V +L ATS+SL LLDE G+GT T D
Sbjct: 644 KASVVICDKIFTRIGASDDLAKGKSTFMVEMWEVANILNNATSKSLILLDEVGRGTSTYD 703
Query: 641 GIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
G+ + I Y + + K L TH EL + EG K E +K Y+++V + +
Sbjct: 704 GLSIAWSVIEYICKNNKLKSKTLFATHYHELTSLEG---KIEGVKNYSIAVKKVD----- 755
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+DI+FL +++ G A SYG+ A LAG+P +VI RA +L
Sbjct: 756 -DDIIFLRKIIKGGADESYGIEVAKLAGIPKDVIDRAKEIL 795
>gi|300727541|ref|ZP_07060932.1| DNA mismatch repair protein MutS [Prevotella bryantii B14]
gi|299775244|gb|EFI71845.1| DNA mismatch repair protein MutS [Prevotella bryantii B14]
Length = 835
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 278/585 (47%), Gaps = 67/585 (11%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
+EG S+ +++ +TPMG R+LR W + P+ ++ ++ RLN + +F E + + L
Sbjct: 246 EEGSSLLKVIDHTITPMGGRMLRRWVVFPLKSVKPIDERLNVVEYFFREPEFRECIDDQL 305
Query: 261 KYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
+ D+ I+ K SP + A D +K+ C + +G +L E
Sbjct: 306 HRIGDLERIISKVAVGRVSPREVVQLRVALDALRPIKTACLYAKNEDLKRIGEQLNLCES 365
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
L+ + +E+ +L VN+ G ++ +G+ ELDELR I
Sbjct: 366 LK----NRIEQEIQPDPPQL------------VNK------GDVIADGYNAELDELRSIS 403
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
++L ++ E + + + Y + GY + + D E ++
Sbjct: 404 RNGRDYLLKIQEQETEKTG-----ISSLKVGYNNVFGYYLEVRNTYKDKVPAEWIRKQTL 458
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
A ++ Y T + +E + + +IL +E + +L+ + F + N
Sbjct: 459 AQAER--------YITQELKEYEEKILGADERILSLEAKLFSELIVDMQAFIPQIQINAN 510
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN 550
A+LDC LS A ++ N+Y+RP++ ++DI+ GRH + E + + ++PND +DN
Sbjct: 511 LIAQLDCLLSFAAISELNHYVRPVVDDSEIIDIKQGRHPVIETQLPIGEQYVPNDVYLDN 570
Query: 551 DGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + + +ITGPN +GKS ++Q ALIV L+ IG FVPA+ A +GL D S +++
Sbjct: 571 DKQQVMMITGPNMAGKSALLRQTALIVLLAQIGCFVPAEGARIGLVDKIFTRVGASDNIS 630
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPK 660
+S+FM+++ + +L T +SL L DE G+GT T DGI + + Y +
Sbjct: 631 LGESTFMVEMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSSANAR 690
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH EL L R+K Y +SV + ++FL +L G + S+G+H
Sbjct: 691 TLFATHYHELNEMEKL--FSRIKNYNVSVKEVDGK------VIFLRKLERGGSNHSFGIH 742
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNK----HVERWSHENISAQDQ 761
A +AG+P ++KRA +L+ +N V R E I++ Q
Sbjct: 743 VAEIAGMPKSIVKRAHVILKQLENENSNVGSVGRPQVEKIASTQQ 787
>gi|260910738|ref|ZP_05917396.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 472
str. F0295]
gi|260635154|gb|EEX53186.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 472
str. F0295]
Length = 874
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 286/596 (47%), Gaps = 65/596 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++++LD +L++ Q + +G S+ ++++ VT MG R
Sbjct: 255 ITSLALIEEDRYVRLDKFTIRSLELIQPMQ----------DDGASLLNVVDRTVTAMGGR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W + P+ +++ + RL+ + + E A L E L + D+ I+ K +
Sbjct: 305 LLRRWLVFPLKEVKPIEQRLDVVDYIFRYPEYRALLDEQLHRIGDLERIISK------VA 358
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYE 338
+ + + L + ++ ES E +R + ++ E I E+
Sbjct: 359 VGRVSPREMVQLKNALQAIQPLKIACLESDNETIRQIGEQMNLCESLRDRIEHEIQPDPP 418
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
LV VNR G ++ EGF ELDELR I +FL +++ Q +
Sbjct: 419 LV-----VNR------GNVIAEGFSPELDELRNISRGGRDFL-----IDIQQREAESTGI 462
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + + D E ++ A ++ Y T + +E +
Sbjct: 463 SSLKIGYNNVFGYYLEVRNTYKDKVPEEWVRKQTLAQAER--------YITQELKEYEER 514
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ KI +E + +LV+ F + N A LDC LS A A +N Y+RP++
Sbjct: 515 ILGADEKIQSLEERLFNELVTATQEFIPQIQINANVVARLDCLLSFAKTAEENRYVRPVI 574
Query: 519 TLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVAL 574
LDI+ GRH + E + + ++PND ++D + +I IITGPN +GKS ++Q AL
Sbjct: 575 EDSDALDIRQGRHPVIETQLPPGEHYVPNDIQLDTERQQIIIITGPNMAGKSALLRQTAL 634
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IV L+ IG FVPA++A VGL D S ++ +S+FM+++ + +L + +SL
Sbjct: 635 IVLLAQIGCFVPAESARVGLVDKIFTRVGASDNIAQGESTFMVEMTEASNILNNVSPRSL 694
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKF 684
L DE G+GT T DGI + + Y + L TH E LNE + K+ +R+K
Sbjct: 695 VLFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFATHYHE-LNE--MEKNFKRIKN 751
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ +SV E N ++F+ RL G + S+G+H A +AG+P ++KRA VL+
Sbjct: 752 FNVSV--KELNGK----VIFMRRLERGGSEHSFGIHVADIAGMPKSIVKRANTVLK 801
>gi|255036742|ref|YP_003087363.1| DNA mismatch repair protein MutS [Dyadobacter fermentans DSM 18053]
gi|254949498|gb|ACT94198.1| DNA mismatch repair protein MutS [Dyadobacter fermentans DSM 18053]
Length = 864
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 263/551 (47%), Gaps = 52/551 (9%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G + +++ VTPMG R LR W + P+ D + RL+A+ FL SEEL SL K
Sbjct: 285 GVPLIDILDHTVTPMGARQLRKWMVLPLKDKAPIEERLSAVEHFLASEELHESLVGYFKQ 344
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
+ D+ ++ K + KS+ + V ++ GI + QL +V
Sbjct: 345 IGDLERLISKVAVRRI--NPRELVQLKKSLKQVAPVKQLLAGGILDKFASQLDACG-ALV 401
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
EK + + + G +V+ G ELDEL I E ++L +
Sbjct: 402 EKIDKELRDDAPVL---------------SNQGRMVQSGVDSELDELHAISYEGKDYLIK 446
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET 442
+ + E+ + + I Y GY + + + ++ ++
Sbjct: 447 LQNREIERTG-----ISSLKIAYNKVFGYYLEVTHAHQSKVPADWIRKQTLVNAER---- 497
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
Y TP+ +E + + + +I +E I +LV F + + + LD
Sbjct: 498 ----YITPELKEYEEKIMNAEDRISAIEFRIFSELVQKAAEFVGAIQQNALVISALDVLS 553
Query: 503 SLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTV-DTFIPNDTRIDNDGR-INIIT 558
S AL A +N Y +P+++ LDI+ GRH + Q++ V ++++PND +D+ + I IIT
Sbjct: 554 SFALAARKNKYAKPVISEGNELDIKEGRHPVIEQQLPVGESYVPNDVYLDDSSQQIIIIT 613
Query: 559 GPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMID 610
GPN +GKS ++Q ALIV ++ +GSFVPA +ATVG+ D S +++ +S+FM++
Sbjct: 614 GPNMAGKSALLRQTALIVLMAQMGSFVPARSATVGIVDKVFTRVGASDNLSRGESTFMVE 673
Query: 611 LHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTE 669
+ + +L +S+SL L+DE G+GT T DG+ + Y D PK L TH E
Sbjct: 674 MTETASILNNLSSKSLVLMDEIGRGTSTYDGVSIAWAITEYLHNQSDCRPKTLFATHYHE 733
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L R+K + ++V +N +VFL +L PG + S+G+H A +AG+P
Sbjct: 734 L--NQLAEDFPRIKNFNVAVKEVDNK------VVFLRKLKPGGSAHSFGIHVAQIAGMPQ 785
Query: 730 EVIKRAAYVLE 740
++ RA+ +++
Sbjct: 786 PIVLRASEIMQ 796
>gi|340350269|ref|ZP_08673265.1| DNA mismatch repair protein MutS [Prevotella nigrescens ATCC 33563]
gi|339608798|gb|EGQ13682.1| DNA mismatch repair protein MutS [Prevotella nigrescens ATCC 33563]
Length = 888
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 283/600 (47%), Gaps = 73/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K+++LD +L++ + ++G S+ ++++ +TPMG R
Sbjct: 267 ITSLARIEEEKYVRLDRFTIRSLELVAPMQ----------EDGSSLLNVVDRTITPMGGR 316
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L W + P+ D++ +N RL+ + ++ + L++ L + D+ I+ K SP
Sbjct: 317 MLHRWLVFPLKDVKPINERLDIVEYYFREPDFRQCLNDQLHRMGDLERIISKVAAGRVSP 376
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K+ C + + VG +L E +R D +E+ L
Sbjct: 377 REVVQLKIALRAIQPMKTACLYANNEALKRVGEQLNLCESIR----DRIEQEIKPDPPHL 432
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ GF ELDELR I + + L ++ E Q
Sbjct: 433 V------------------AKGDVIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTG- 473
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 474 ----ISSLKIGFNNVFGYYLEVRNTFKDKVPADWIRKQTLAQAER--------YITPELK 521
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A +A +N Y
Sbjct: 522 EYEAKILGADEKILALEARLFNELVQDMQEFIPQIQINANLVARLDCLLAFANIAEENKY 581
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +IPND +DN+ + I +ITGPN +GKS +
Sbjct: 582 VRPMVDDSMVIDIKKGRHPVIETQLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALL 641
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IGSFVPA+ A +GL D S +++ +S+FM+++ + +L
Sbjct: 642 RQTALIVLLAQIGSFVPAEGARIGLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNV 701
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSE 680
T +SL L DE G+GT T DGI + + Y + L TH E LNE
Sbjct: 702 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRAAARTLFATHYHE-LNE-MAKNFR 759
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
R+K + +SV + I+F+ +L G + S+G+H A +AG+P ++KRA VL+
Sbjct: 760 RIKNFNVSVKEVDGK------IIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVLK 813
>gi|212692537|ref|ZP_03300665.1| hypothetical protein BACDOR_02034 [Bacteroides dorei DSM 17855]
gi|212664822|gb|EEB25394.1| DNA mismatch repair protein MutS [Bacteroides dorei DSM 17855]
Length = 861
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 244 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 292
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 293 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 352
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 353 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 408
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 409 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 453
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 454 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 498
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A VA +NNY
Sbjct: 499 EYEEKILGAEDKILVLETKLYNELVIALAEFIPAIQINANQIARLDCLLAFANVARENNY 558
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ +I IITGPN +GKS +
Sbjct: 559 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 618
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 619 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 678
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 679 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 735
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 736 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 789
>gi|298676066|ref|YP_003727816.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
gi|298289054|gb|ADI75020.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
Length = 887
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/564 (28%), Positives = 280/564 (49%), Gaps = 61/564 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++ TPMG RLL+ W ++P++ ++ +N RL+A+ + L L YVK
Sbjct: 294 TILKVLDDTKTPMGGRLLQKWLVKPLISIDKINRRLDAVQNLKEETLVRFDLRSYLSYVK 353
Query: 265 DIPHILKKF---NSPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLRE-QLRLLNF 319
D+ ++ + NS A D A KS+ + + + E S+ L+E L +F
Sbjct: 354 DVERLIGRIVYGNS-----NARDLVALKKSLEVVPDIIGCLKECDQSDILKEIHNELSSF 408
Query: 320 DIVEKAASCITTELAYVYELV-IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
TEL + EL+ GI D + + G L++ G+ +ELDEL+ + E
Sbjct: 409 -----------TELGDITELIEKGITDEPPATVR-EGGLIKPGYSEELDELKDMSRHSKE 456
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
+ +AS + + + Y GY + + + + + ++ A ++
Sbjct: 457 W---IASFQKQERERTGINSL--KVGYNKVFGYYIEVTKPNIKYVPDDYIRKQTMANAER 511
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
++TP+ +E +N++ KI+ +E + D+ S + S +L + +L
Sbjct: 512 --------FYTPELKERENMIISADEKIVSLEYNLFTDINSKVASHSKNLQRTATLIGKL 563
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRID-NDGRINI 556
D +LA +A NNY+RP +T + + I+ GRH + E VD+ F+ ND ++ D + +
Sbjct: 564 DVLANLAEIAVNNNYVRPEVTDDCDITIREGRHPVVENKVDSGFVANDCEMNCTDNQFLL 623
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFM 608
ITGPN +GKS Y++Q +LI ++ GSFVPA A++G+ D + + QS+FM
Sbjct: 624 ITGPNMAGKSTYMRQNSLITIMAQAGSFVPASYASIGIVDRVFTRVGAFDDLASGQSTFM 683
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTH- 666
+++ ++ +L AT +SL LLDE G+GT T DG + + Y D V + L TH
Sbjct: 684 VEMVELANILNNATPKSLVLLDEIGRGTSTFDGYSIAKAVVEYIHKKDGVGVRSLFATHY 743
Query: 667 --LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
LT+L N K +R+ Y ++V +N +VFL ++VPG SYG+ A
Sbjct: 744 HQLTDLEN-----KLKRVSNYHIAVKEEGDN------LVFLRKIVPGATDKSYGIQVARY 792
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHV 748
AGVP +V RA +L+ + N +
Sbjct: 793 AGVPKKVTSRAREILKDIEKNASI 816
>gi|62089358|dbj|BAD93123.1| MSH5 protein variant [Homo sapiens]
Length = 489
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 222/418 (53%), Gaps = 38/418 (9%)
Query: 310 LREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
LR+ R L + + A + +L ++ L+ ++D S + T V E+D
Sbjct: 31 LRDACRSLPQSIQLFRDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFT-VLPNIDPEID 89
Query: 368 ELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFE-EKLDDTT 424
E ++ LP FL EVA EL L + +P ++YI IG+L+ I + + +
Sbjct: 90 EKKRRLMGLPSFLTEVARKELENL-----DSRIPSCSVIYIPLIGFLLSIPRLPSMVEAS 144
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
++ G +F F ++L Y + +T+ELD LLGD++ +I D E + L +
Sbjct: 145 DFEINGLDFMFL----SEEKLHYRSARTKELDALLGDLHCEIRDQETLLMYQLQCQVLAR 200
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIP 543
+ L + ++ A+ LD L+LA A Y RP + + L + IQNGRH L E+ TF+P
Sbjct: 201 AAVLTRVLDLASRLDVLLALASAARDYGYSRPRYSPQVLGVRIQNGRHPLMELCARTFVP 260
Query: 544 NDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS----- 597
N T D GR+ +ITGPN SGKSIY+KQV LI F++ +GSFVPA+ A +G D+
Sbjct: 261 NSTECGGDKGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRI 320
Query: 598 ---KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV- 653
+ ++ S+FMIDL+QV + AT+QSL L+DEFGKGT T DG+ LL + +++
Sbjct: 321 HSCESISLGLSTFMIDLNQVAKAVNNATAQSLVLIDEFGKGTNTVDGLALLAAVLRHWLA 380
Query: 654 ---TCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRL 708
TC P + V T+ L+ LP+ +++ TM D D+VF Y++
Sbjct: 381 RGPTC---PHIFVATNFLSLVQLQLLPQGPLVQYLTM------ETCEDGNDLVFFYQV 429
>gi|227888714|ref|ZP_04006519.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii ATCC
33200]
gi|227850741|gb|EEJ60827.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii ATCC
33200]
Length = 857
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 277/584 (47%), Gaps = 61/584 (10%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L + + R + L + ++LK V D+ + + + + + L+
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRI-----AFGSVNAREMLQ 358
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
SL + +I + S L N+ A I L +++L++ I N
Sbjct: 359 LAHSLGAIPEILNALLETS---NPHLQNY------AKQIDP-LKGIHDLIVNTIVDNPPL 408
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQ 408
G L+REG ++LD R ++L E+ S E+ + +L + Y
Sbjct: 409 PTTEGGLIREGVSEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------VGYNKV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + ++ ++ T Y TP +E + L+ + K
Sbjct: 462 FGYYIEVTNSNKSKVPTDR-------YTRKQTLTNAERYITPDLKEHEALILEAEAKSTG 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEPLLDIQ 527
+E + L + + L K A LD + A V+ QNNY+RP T + +++
Sbjct: 515 LEYDLFVKLREDVKKYIPALQKLAKQIASLDVLTNFATVSEQNNYVRPNFATDKQEINVV 574
Query: 528 NGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++ IGSFV
Sbjct: 575 NGRHPVVEQVMTAGSYIPNDVKMDQDTNIFLITGPNMSGKSTYMRQMALIAIMAQIGSFV 634
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 635 PADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTA 694
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLRPENNS 696
T DG+ L G + Y V K L TH EL + + LK + V E N
Sbjct: 695 TYDGMALAGAIVKYL-HDKVGAKALFATHYHELTD-----LDQTLKHLKNIHVGATEENG 748
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 749 K----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|228469425|ref|ZP_04054439.1| DNA mismatch repair protein MutS [Porphyromonas uenonis 60-3]
gi|228309109|gb|EEK17739.1| DNA mismatch repair protein MutS [Porphyromonas uenonis 60-3]
Length = 874
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 297/616 (48%), Gaps = 71/616 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + + +++D +L++ P + G G ++ ++++ VTPMG R
Sbjct: 257 ITRIVRIDEQRHVRIDGFTAHSLEL----TTPMNAG------GTTLRQILDQTVTPMGAR 306
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL W P+ +L+ + R + ++ + + +L L + +K + D+ ++ +
Sbjct: 307 LLDQWIAFPLKELQAIQQRQSIVANLVDNPQLRTKLTDQMKEIGDLQRLVGRV------- 359
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ ++ +G+S +L +R L D E+ + + + L +L
Sbjct: 360 -----------AMGRITPREVVRLGLSIALIAPIRQLALDEGEETLTTLCSLLDPCTQLC 408
Query: 341 IGI---IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
I ++ ++ G G + EGFC+ELD+LR++ + ++L+++ + E H
Sbjct: 409 QQITFQLNPEAPQQIGKGATIAEGFCEELDQLRRLLKSGKQYLDDLLARET---EHTGIS 465
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
I + + GY + + + E ++ ++ Y T + +E +
Sbjct: 466 SL--KIGFNNVFGYYLEVRNTYKEQVPEEWIRKQTLVNAER--------YITQELKEYEE 515
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ +IL +E+ + L+ + F++ LL+ A+LD SLA VA +Y RP
Sbjct: 516 KILGAEDRILALEQELFAKLIGTLQQFANQLLQDAQILAQLDVLASLAAVAEAYDYCRPT 575
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVA 573
L L+I +GRH + E T+ +IPND ++ D +I IITGPN SGKS ++Q A
Sbjct: 576 LNDGYDLEIVDGRHPVIERTLPAGQPYIPNDVKLSPIDCQIMIITGPNMSGKSALLRQTA 635
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV ++ +GSFVPA +AT+G+ D S ++ +S+FM+++ + +L T +S
Sbjct: 636 LIVIMAQMGSFVPATSATIGIVDSVYTRVGASDNIAVGESTFMVEMQEAASILNNLTPRS 695
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
L L DE G+GT T DG+ + + Y T K L TH E LNE ER++
Sbjct: 696 LILFDELGRGTSTFDGVSIAWAIVEYLHSTTQGRAKTLFATHYHE-LNE-LADHLERVQC 753
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y +S + +++FL +LVPG + S+G+ A LAG+P ++ RA VL+
Sbjct: 754 YNVSAREIDG------EMLFLRKLVPGGSAHSFGIQVAKLAGMPTWIVARAGEVLQ---- 803
Query: 745 NKHVERWSHENISAQD 760
H+E + E+ A D
Sbjct: 804 --HLEAYRTESDQAPD 817
>gi|448613581|ref|ZP_21663461.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
gi|445740478|gb|ELZ91984.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
Length = 903
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 185/647 (28%), Positives = 296/647 (45%), Gaps = 87/647 (13%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKLDATAHEA 182
+ SE+ RA+GG+LA +E E+G + + ++V + L+LDAT
Sbjct: 219 LDSELATRAAGGILAYVE-----------ETGAGVLRSMTRLQVYHASDLLELDATTQRN 267
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L++ +T H G S+F ++ VT G RLLR W RP D + L+ RL+A
Sbjct: 268 LELTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDELSRRLDA 318
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D L ++ +
Sbjct: 319 VQSLASAALARERVREVLDGAYDLERLASRAASGSAGANDLLSVRDTLDVLPALADAIDG 378
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
++ + ++E + R AA+ + TELA + + K G L
Sbjct: 379 TELADSPLAEVVSRPDR--------DAAASLQTELADA-------LAEDPPKTVTQGGLF 423
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIF 416
+ G+ DELD L + +E +L+ +A E Q L H+ + YI Q+G +
Sbjct: 424 QRGYDDELDGLIERHESAKSWLDTLADREKRQHGLSHVTVDRNKTDGYYI-QVGKSVA-- 480
Query: 417 EEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+++ D TL+ + F T+ L + L+ GD+ + +
Sbjct: 481 -DQVPDYYRQIKTLKNSKRF---------VTEELEEKEREVLRLEETRGDLEYDLF---- 526
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+DL + ++ L AE+D SLA A N + RP LT L I+ GRH
Sbjct: 527 ---QDLRERVADRAELLQNVGRTLAEVDALASLATHAAGNGWTRPELTDAGSLRIEAGRH 583
Query: 532 VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT 591
+ E T + F+PND +D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +AT
Sbjct: 584 PVVETTTE-FVPNDLHMDRERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARSAT 642
Query: 592 VGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIG 643
+G+ D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DGI
Sbjct: 643 IGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVGRGTATYDGIS 702
Query: 644 LLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENNSTDVEDI 702
+ Y +V K L TH EL ++ L + + V E + D+
Sbjct: 703 IAWAATEYL-HNEVRAKTLFATHYHELTT-----LADHLDRVANVHVAADERDG----DV 752
Query: 703 VFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
FL +V G SYG+H A LAGVP V+ RA VL+ ++ K +E
Sbjct: 753 TFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLRDEKAIE 799
>gi|268318972|ref|YP_003292628.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii FI9785]
gi|262397347|emb|CAX66361.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii FI9785]
Length = 857
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 277/584 (47%), Gaps = 61/584 (10%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
++L++ T L++ ++ K MG S+F +++K T MG RLL++W RP+
Sbjct: 252 QYLQMSHTVQTNLELIKSAKTSKKMG--------SLFWLLDKTSTAMGGRLLKSWIERPL 303
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L + + R + L + ++LK V D+ + + + + + L+
Sbjct: 304 LSVTEITRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRI-----AFGSVNAREMLQ 358
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
SL + +I + S L N+ A I L +++L++ I N
Sbjct: 359 LAHSLGAIPEILNALLETS---NPHLQNY------AKQIDP-LKGIHDLIVNTIVDNPPL 408
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQ 408
G L+REG ++LD R ++L E+ S E+ + +L + Y
Sbjct: 409 PTTEGGLIREGVSEQLDRYRDAMNNGKKWLSEMESHEREVTGINNLK-------VGYNKV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + ++ ++ T Y TP +E + L+ + K
Sbjct: 462 FGYYIEVTNSNKSKVPTDR-------YTRKQTLTNAERYITPDLKEHEALILEAEAKSTG 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEPLLDIQ 527
+E + L + + L K A LD + A V+ QNNY+RP T + +++
Sbjct: 515 LEYDLFVKLREDVKKYIPALQKLAKQIASLDVLTNFATVSEQNNYVRPNFATDKQEINVV 574
Query: 528 NGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
NGRH V Q MT ++IPND ++D D I +ITGPN SGKS Y++Q+ALI ++ IGSFV
Sbjct: 575 NGRHPVVEQVMTAGSYIPNDVKMDQDTNIFLITGPNMSGKSTYMRQMALIAIMAQIGSFV 634
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+AT+ + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 635 PADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEIGRGTA 694
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTMSVLRPENNS 696
T DG+ L G + Y V K L TH EL + + LK + V E N
Sbjct: 695 TYDGMALAGAIVKYL-HDKVGAKALFATHYHELTD-----LDQTLKHLKNIHVGATEENG 748
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P +V++ A +L+
Sbjct: 749 K----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLK 788
>gi|167630634|ref|YP_001681133.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
gi|167593374|gb|ABZ85122.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
Length = 910
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/581 (29%), Positives = 271/581 (46%), Gaps = 59/581 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ F++LD L++ +T + S G S+ G+++K VT MG RL++ W +P
Sbjct: 266 DHFMRLDPATRRNLELTRTMREGSRKG--------SLLGVIDKTVTAMGGRLIKRWIEQP 317
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D+E + R ++ + L + L+ V D+ + K S D A
Sbjct: 318 LTDVEAICKRQAVVAALVDDGLLRQDVRAGLRAVYDLERLAGKVAYGS--ANGRDLIALA 375
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L V G S ++EK AS I + ++D
Sbjct: 376 SSLEALPTVLDKLRQGPS-------------VLEKLASRIDALTPVARRITETLVDDPPV 422
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
+ G L+R GF E+DELR+I E+L + E + + + +
Sbjct: 423 SVRD-GGLIRSGFHPEVDELRKIAGSGKEWLAHIEQRERERTGIRSLK-----VGFNKVF 476
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + + + + ++ A +GE Y TP+ + + + K+ +
Sbjct: 477 GYFIEVSKANMTSVPADYIRRQTLA----NGER----YITPELKTYEEKILGAEEKLTQL 528
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + +L S I L K A LD F +LA VA + Y+ P + + IQ G
Sbjct: 529 EYRLFTELRSSIEALLPQLQKTAEQVAHLDVFAALAQVAVEQGYVCPDIHDGTEIHIQGG 588
Query: 530 RHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
RH + E + F+PNDTR + + +ITGPN +GKS Y++QVALIV L+ +GSFVPA
Sbjct: 589 RHPVVEAHLGPGVFVPNDTRFCDGETLLLITGPNMAGKSTYMRQVALIVLLAQVGSFVPA 648
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
AA +G+ D S + QS+FM+++ +V +L ATS+SL +LDE G+GT T
Sbjct: 649 TAAAIGVVDRIFTRVGASDDLATGQSTFMVEMTEVAHILHHATSRSLVVLDEVGRGTSTF 708
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + K L TH EL+ E LP ++ YT++V S D
Sbjct: 709 DGMAIAWAVAEAIQRLGA--KSLFATHYHELVRLEETLPG---VRCYTIAV----RESGD 759
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
DIVFL+++ PG SYG+ A LAG+P+ VI RA +L
Sbjct: 760 --DIVFLHQIRPGGVNKSYGIQVARLAGLPSSVILRAREIL 798
>gi|124485989|ref|YP_001030605.1| DNA mismatch repair protein MutS [Methanocorpusculum labreanum Z]
gi|124363530|gb|ABN07338.1| DNA mismatch repair protein MutS [Methanocorpusculum labreanum Z]
Length = 864
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/558 (29%), Positives = 268/558 (48%), Gaps = 66/558 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++FG +N+ TPMG R+LR+ RP+ E +N RL+A+ FF L++ L
Sbjct: 294 TLFGFLNRTKTPMGSRVLRSTITRPLTSPEKINHRLDAVGFFTRRPVLLSGTRTILSRFT 353
Query: 265 DIPHILKKF----NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL-RLLNF 319
DI I + SP + + A + + + L G L+++L ++ +F
Sbjct: 354 DIERIAGRIAYGNASPRDLLALASSLAAVPELTAEL-------CGAEGLLKDELEQIPSF 406
Query: 320 D-IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
D + + S I E VY+ G ++REG+ +LD++R I +
Sbjct: 407 DGVADLILSAIVDEPPLVYK---------------NGGVIREGYSSDLDQIRNIVTNGRD 451
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKL---DDTTLEQLQGFEFAF 435
++ E+ E + + I Y + GY + I + L DT +E
Sbjct: 452 WIAELQQTERERTGIRSLK-----IAYNNVFGYYIEITKANLHLVPDT-------YERKQ 499
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
+ +GE + P RE + ++ ++L +E ++ L++H+ F L +A
Sbjct: 500 TTANGER----FTIPALREREAVMAQADDRVLALEISLFESLLTHLSEFVPALQQASRSI 555
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPNDTRIDNDG-R 553
+D + A ++ NY+RP L L I++GRH + E TV ++PNDT + + G +
Sbjct: 556 GTIDMIAAFADLSLSGNYVRPELVPGTELLIRDGRHPIVENTVPGGYVPNDTEMSSIGQQ 615
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I I+TG N +GKS Y++ VALI ++ G FVPA A +G+ D S + QS
Sbjct: 616 ILILTGANMAGKSTYMRSVALICIMAQTGCFVPASFARIGIVDRVFTRVGASDDLAGGQS 675
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVC 664
+FM+++ ++ +L AT QSL LLDE G+GT T DG + + Y P+ L
Sbjct: 676 TFMVEMLELANILNNATDQSLILLDEIGRGTSTVDGYAIARAVLEYLHGKGGAGPRTLFA 735
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH +L+ G + R++ Y +V D DI FL +L+PG SYG+H A +
Sbjct: 736 THFHQLI--GMESELRRVRNYHFAV------KEDQHDITFLRKLIPGATDRSYGIHVAKI 787
Query: 725 AGVPAEVIKRAAYVLEAA 742
AGVP +V+ RA+ +L A
Sbjct: 788 AGVPKKVLVRASDLLREA 805
>gi|347968266|ref|XP_312286.5| AGAP002642-PA [Anopheles gambiae str. PEST]
gi|333468084|gb|EAA07673.5| AGAP002642-PA [Anopheles gambiae str. PEST]
Length = 816
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 178/658 (27%), Positives = 311/658 (47%), Gaps = 49/658 (7%)
Query: 67 ALKRSDGTTEAPT-VKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMG 125
++ +S G P+ VK+V+ + S QA RL+ ++ GM S +E +L S++
Sbjct: 96 SVDQSGGNASQPSNVKIVEYTAQSQAQARGRLLAHKLAGMPPESSERECRTFLESIVPFE 155
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
E+ V + G LL +L+ + DTL + + + V+ + L +D +EALQI
Sbjct: 156 QELLVTSVGNLLLLLDT--VGDTLSPAQ------LVTRINLVTPSTQLVIDGLTYEALQI 207
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
F +HPS G G SV+ + NKC + G L +PI D L R + + +
Sbjct: 208 FDASRHPSGFKCGTDTRGLSVYSLFNKCSSKNGEEWLSRLMTQPIRDRAELQHRHDTVQW 267
Query: 246 FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLLHVNKIFE 303
L + + LK++ ++ + +K TA DW K++ L + K+
Sbjct: 268 LLANVRYANQFDQCLKHLTNVGLLYRKL----LQGTARNVDWKMLKKNLYYLYSLCKLCA 323
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
+ + ++ Q+ + + T L +V + +D+ + E+ T +R G
Sbjct: 324 LTLEDA---QVAGTVVQELGQYTRNPTNALKHVLYTIDKCLDLEKGDEENKVT-IRAGLD 379
Query: 364 DELDELRQIYEELPEFLEEVA--SLELVQLPHLCKEMFVPCIVYIHQIGYLMCI-FEEKL 420
+D LR+ Y+ L E + E + LE +QL +M C+ Y+ G+++ +E+L
Sbjct: 380 PAVDRLREQYDGLREVVLESSRLGLETLQL-----DMANICVTYLPSFGFVISTQVDEQL 434
Query: 421 DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSH 480
+ + Q + F+ F ++ +EL++ G + +++ E A+ L +
Sbjct: 435 QRSGIFQHESFDLVFQ----ADNTAYFQISLCKELNDEFGQMVASMIEHELAVQTRLTTF 490
Query: 481 ICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT-LEPLLDIQNGRHVLQEMTVD 539
+ ++ A +LD LS A VA + Y+RP++ +L IQ GRHV+ E
Sbjct: 491 VGTKFPEVMGVFKLAGKLDALLSFATVAKMHRYVRPLVCDGAKVLQIQGGRHVVLEHR-R 549
Query: 540 TFIPNDTRID--NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS 597
T+ NDT + N +N+I GK+ Y+K+VA+I +L+H+GS+VPA A + L DS
Sbjct: 550 TYRANDTCVGETNHHLVNVIAADTSVGKTTYLKEVAIICYLAHVGSYVPAAYAKIPLLDS 609
Query: 598 --------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ + + +SSFM +L+Q+ +L+ AT+ SL L+DEFGKGT +G LL +I
Sbjct: 610 IYTRLDHPESIFSGRSSFMSELYQMASLLQNATASSLVLIDEFGKGTNYLEGKSLLIASI 669
Query: 650 NYFVT-CDVPPKVLVCTHLTELLNEGCLPKSER---LKFYTMSVLRPENNSTDVEDIV 703
+ + D P V T T + E LP R ++ + R +ST D +
Sbjct: 670 EHLLKRGDSAPITFVTTKFTGI--ERFLPTVHRNLLVRVHRTPTDRQSRSSTRTSDTL 725
>gi|317121911|ref|YP_004101914.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
gi|315591891|gb|ADU51187.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
Length = 1087
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 279/587 (47%), Gaps = 62/587 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L ++L +DA + L++ + + S G ++ +++ T MGRRLLR W R
Sbjct: 374 LGQWLAIDANSRRNLELVRRLRDGSRQG--------TLLDVLDLTETAMGRRLLRQWIER 425
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++D + + RL+A+ + L + L L V+D+P +L + A D
Sbjct: 426 PLVDRDAVEDRLDAVEALVADPFLRSDLRRLLAGVQDLPRLLGRVGYQQ--ANARDLLGI 483
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT-ELAYVYELVIGIIDVN 347
+S+ L + + ++ +L + + A T A V + + + +
Sbjct: 484 ARSLERLPELAARLDGALNGRRGGRLEAVRAGLDPDLAELGTRLRAALVDDPPVTVTE-- 541
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+R+GF E+DELR+ E ++ +A+LE + + + +
Sbjct: 542 -------GGLIRDGFHPEVDELRRATREGRDW---IAALEARERERTGIKSL--KVGFNK 589
Query: 408 QIGYLMCIFEE-----KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
GY + + D + L G E + TP+ +++++ +
Sbjct: 590 VFGYYIEVTRANRHLVPADYERRQTLAGAER-------------FVTPELKDVESRILGA 636
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
++ +E + +L + L A + AELD +LA A + Y+RP +T +
Sbjct: 637 EERLAALEHRLFIELRQEVAAAIPRLQVAADALAELDVLAALAEAAARYGYVRPKITTDR 696
Query: 523 LLDIQNGRH-VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSH 580
L I+ GRH VL F+PND +D D R+ +ITGPN +GKS +++QVALIV ++
Sbjct: 697 RLRIKAGRHPVLDRTLGGRFVPNDVDLDGQDERVMLITGPNMAGKSTFMRQVALIVIMAQ 756
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
+GSFVPA A +GL D S + + QS+FM+++ + + + AT +SL LLDE
Sbjct: 757 MGSFVPAAEAEIGLVDRIFCRVGASDDLASGQSTFMVEVAETALAVHNATPRSLILLDEI 816
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
G+GT T DGI + I Y V + + LV TH EL G ++ Y V+
Sbjct: 817 GRGTSTFDGIAIARAVIEY-VHDRIGARTLVSTHYHELT--GLAATRPGIRNYHARVV-- 871
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
E T + FL+R+VPG A SYG++ A LAG+P E+++RA +L
Sbjct: 872 EEGDT----VRFLWRIVPGGADRSYGINVARLAGLPVEIVERAKAIL 914
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 306/642 (47%), Gaps = 94/642 (14%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEAL 183
G + ASG LL L DTL N SI I+++ S N+++ LD L
Sbjct: 228 GMAAGINASGALLHYLR-----DTL------NLSIDHINTISTYSTNEYMTLDRMTQTNL 276
Query: 184 QIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI 243
++ ++ + ++ ++++ TPMG RL+ W RP+L ++ + +R +A+
Sbjct: 277 ELTRS--------LQDGTRKHTLLSILDQTCTPMGGRLILQWLKRPLLCMKTIQARQDAV 328
Query: 244 SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
F+ + L +L+ V+DI ++ K ++ A K I +L H I
Sbjct: 329 QSFIERDWTHDQLKASLEDVRDIERLMMKVSANY---------ASPKDIAALRH--SIEP 377
Query: 304 VG-ISESLREQLRLLNFDIVEKAASCITT---ELAYVYELVIGIID--VNRSKEK-GYGT 356
+G I LRE A+S I T +L + EL+ I + V+ +K G
Sbjct: 378 LGKIKSLLREP---------AAASSLIQTHEKQLNPLPELISLIANALVDEPPQKLSDGN 428
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVAS-----LELVQLPHLCKEMFVPCI-VYIHQIG 410
+ R+GF ELDE+R+I +L + L++ L MF I V Q G
Sbjct: 429 IFRKGFHQELDEIREISANSKSWLNNYQNKLREELDIKNLKVGFNRMFGYYIEVSKGQAG 488
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ FE + E+ + T +E + + KI +E
Sbjct: 489 KVPESFERRQTLVNAER-------------------FITKDLKEYEQKVLTAEEKISSIE 529
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ + + L + + ++D ++K A +DC +LA A + Y RP + L+I GR
Sbjct: 530 QELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLHGYQRPEIDQSQRLEITEGR 589
Query: 531 H-VLQEMTVD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H V++ + ++ F+PNDT +D++ R+ +ITGPN +GKS YI+QVALI ++ IGSFVPA
Sbjct: 590 HPVIEAVNMNEKFVPNDTLLDDENNRLLLITGPNMAGKSTYIRQVALITIMAQIGSFVPA 649
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
A +GL D S ++ QS+FM+++ + +L AT +SL +LDE G+GT T
Sbjct: 650 KTAHIGLVDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATDRSLVILDEIGRGTSTY 709
Query: 640 DGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DGI + + +T + + L TH EL E +P + Y ++V E++
Sbjct: 710 DGISIAWSVAEFLLTEEGSTARTLFATHYCELTKLEEKIPGAVN---YNVAVHESEDS-- 764
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
I+FL ++V G SYG+H A LAG+P VI+RA +L
Sbjct: 765 ----IIFLRKIVKGGTDKSYGIHVARLAGLPLPVIERAKEIL 802
>gi|448560973|ref|ZP_21634325.1| DNA mismatch repair protein MutS [Haloferax prahovense DSM 18310]
gi|445721205|gb|ELZ72873.1| DNA mismatch repair protein MutS [Haloferax prahovense DSM 18310]
Length = 912
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 211/772 (27%), Positives = 351/772 (45%), Gaps = 113/772 (14%)
Query: 2 QVYMACILHGHRVGVSYYDSSIRQLHVLEVW--EDSNSDFPLIDIVKYQAQPQIIYTSTK 59
Q A + G VG+++ D + Q V E +D+ ++ V+ P++ +
Sbjct: 117 QFLAAVVTDGDGVGLAFADITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPEL-----R 171
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
++ LS L+ + T+A + L + F+ +A H +++E+ +
Sbjct: 172 GDDETLSRLREA---TDA-SFSLFSTEAFAPGRARH--------------AVREQ--FGA 211
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + S++ RA+GG+LA +E E+G + + ++V + L+L
Sbjct: 212 STVDSVGLDSDLATRAAGGVLAYVE-----------ETGAGVLRSMTRLQVYHPSDLLEL 260
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 261 DATTQRNLELTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDE 311
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
L RL+A+ + A E ++ V D + L++ S S +A L
Sbjct: 312 LARRLDAVQSLASA----ALARERVREVLDGAYDLERLASRSASGSA--------GASDL 359
Query: 296 LHVNKIFEV--GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L V V +++++ E L + + E + A + + + + K
Sbjct: 360 LSVRDTLSVLPALADAI-EGTELADSPLAEVVSRPDRDAAADLRADLADALAEDPPKTVT 418
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGY 411
G L ++G+ DELD+L + +E +L+ +A E L H+ + YI Q+G
Sbjct: 419 QGGLFQQGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYI-QVGK 477
Query: 412 LMCIFEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
+ +++ D TL+ + F T+ L + L+ GD+ +++
Sbjct: 478 SVA---DQVPDHYRQIKTLKNSKRF---------VTEELEEKEREILRLEEARGDLEYEL 525
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+ +L + ++ L AE+D SLA A N + RP LT LDI
Sbjct: 526 FE-------ELRERVARRAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTDAGALDI 578
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+ GRH + E T D F+PND R+D++ I+TGPN SGKS Y++Q ALI L+ +GSFVP
Sbjct: 579 EAGRHPVVETTTD-FVPNDLRMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVP 637
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT T
Sbjct: 638 ARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTAT 697
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENNST 697
DGI + Y ++ K L TH EL ++ L + + V E +
Sbjct: 698 YDGISIAWAATEYL-HNEIRAKTLFATHYHELTT-----LADHLDRVANVHVAADERDG- 750
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RAA VL+ + K +E
Sbjct: 751 ---DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRAADVLDRLREEKAIE 799
>gi|427384825|ref|ZP_18881330.1| DNA mismatch repair protein mutS [Bacteroides oleiciplenus YIT
12058]
gi|425728086|gb|EKU90945.1| DNA mismatch repair protein mutS [Bacteroides oleiciplenus YIT
12058]
Length = 871
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 174/607 (28%), Positives = 294/607 (48%), Gaps = 87/607 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ S+ + +K+++LD +L++ + M G G S+ +++K ++PMG R
Sbjct: 253 VTSLARIEEDKYVRLDKFTVRSLELIGS------MNDG----GSSLLNVIDKTISPMGAR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ D+ +N RLN + +F + + E L + D+ I+ K SP
Sbjct: 303 LLKRWLVFPLKDVLPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSP 362
Query: 277 SFIYT---ASDWTAFLKSIC---SLLHVNKIFE-VGISESLREQLRLLNFDIVEKAASCI 329
+ A +K+ C +N+I E + I +S+R++ I
Sbjct: 363 REVVALKVALLAIEPIKAACMDADNASLNRIGEQLNICQSIRDR---------------I 407
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-- 387
E+ L+I G +++ G ELD+LRQI ++L ++ E
Sbjct: 408 EKEINNDPPLLIN-----------KGGVIKSGVNAELDDLRQIAYSGKDYLLQIQQRESE 456
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
L +P L I Y + GY + + D E ++ A ++ Y
Sbjct: 457 LTGIPSLK-------IGYNNVFGYYIEVRNLHKDKVPQEWIRKQTLANAER--------Y 501
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
T + +E + + KIL +E + +LV + F + N A LDC S A V
Sbjct: 502 ITQELKEYEEKILGAEDKILILETQLYMELVQALSEFIPAIQVNANQIARLDCLHSFANV 561
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYS 563
A +NNY+RPI+ +LDI+ GRH + E + + +I ND +D+ + I IITGPN +
Sbjct: 562 ARENNYIRPIIEDSDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSGSQQIIIITGPNMA 621
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS ++Q ALI L+ IGSFVPA++A +GL D S +++ +S+FM+++++
Sbjct: 622 GKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAA 681
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEG 674
+L + +SL L DE G+GT T DGI + + + + L TH E LNE
Sbjct: 682 DILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPRAKARTLFATHYHE-LNE- 739
Query: 675 CLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
+ KS +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++K
Sbjct: 740 -MEKSFKRIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVK 792
Query: 734 RAAYVLE 740
RA +L+
Sbjct: 793 RANDILK 799
>gi|307354004|ref|YP_003895055.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
gi|307157237|gb|ADN36617.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
Length = 881
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 279/566 (49%), Gaps = 55/566 (9%)
Query: 199 RAKEG-FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
R ++G S++ ++++ TPMG R+LR+W P++D +N+NSRLNA+ FF + + SL
Sbjct: 288 RTRQGKNSLYDILDETKTPMGSRVLRSWLTAPLVDRDNINSRLNAVEFFFNNLYIRESLR 347
Query: 258 ETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
L DI I + + P + T + A + I SL E G ++ +
Sbjct: 348 FLLHRYADIERIAARISYGNAGPRELVTLKNSLAKIPEIRSLFS-----EEG---AVTPE 399
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
L + +E C+ EL+ I+ G ++++G+ +LDELR
Sbjct: 400 LISCSLGSIESLDECV--------ELIERSIEDEPPVLARTGGVIKKGYNHDLDELRDSS 451
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
E++ + E + K + V Y GY + + + L Q ++
Sbjct: 452 GSAKEWIAQFQQDERDRTG--IKSLKVS---YNKVFGYYIEVTKSNLKLVP----QEYQR 502
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+ +GE + P+ +E ++L+ + + + +E+ + +++ + + +L+
Sbjct: 503 KQTTANGER----FTLPQLQEKESLIVNAEERFIALEQDLYDGILTELREKVEEILETAK 558
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDTFIPNDTRID-ND 551
LD A ++ NY+RP++ L I +GRH V++ F+PND ID +D
Sbjct: 559 MIGRLDVLADFAHLSSNFNYVRPVIEDSARLLISDGRHPVVERNQSSGFVPNDAGIDSSD 618
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAE 603
+I IITG N +GKS Y+++VAL+ ++ G FVPA A +G+ D +++
Sbjct: 619 NQILIITGANMAGKSTYMREVALLCIMAQAGCFVPASGAVIGIIDRIFTRVGAFDDLSSG 678
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVL 662
QS+FM+++ ++ +L T +SL +LDE G+GT T DG + I Y + P+ L
Sbjct: 679 QSTFMVEMLELANILNNVTDKSLVILDEIGRGTSTLDGYSIACAVIEYLHGSGSSGPRTL 738
Query: 663 VCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
TH E+++ EG K +R+K Y +V DIVFL +L+PG + SYG+H
Sbjct: 739 FATHFHEMVDIEG---KMKRVKNYHFAV------KDTGSDIVFLRKLIPGASDKSYGIHV 789
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKH 747
A LAG+P +V+KR+ +L Q ++
Sbjct: 790 AKLAGIPRKVLKRSEEILREEQEKEY 815
>gi|154497030|ref|ZP_02035726.1| hypothetical protein BACCAP_01323 [Bacteroides capillosus ATCC
29799]
gi|150273429|gb|EDN00557.1| putative DNA mismatch repair protein MutS [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 869
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 178/637 (27%), Positives = 305/637 (47%), Gaps = 74/637 (11%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
E+ V+A+GGLL+ L + D S A++T+ S + ++LD TA L++
Sbjct: 235 ELAVQAAGGLLSYLYETQKTDL-----SHIAALTVHSS---ASRPSMELDLTARRTLELT 286
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + G+ K G S+ +++K T MG RL+R W +P+L +N RL A+
Sbjct: 287 ETMR-------GKEKRG-SLLWVLDKTRTAMGHRLIRTWLEQPLLSPVAINRRLEAVKAL 338
Query: 247 ----LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ +E++ L E + I I+ + + L + +LL + F
Sbjct: 339 VDDPIARDEIVLCLREITDLERLIGRIVYGTAGGRDLAALAAGLGHLPDLRALL---EPF 395
Query: 303 EVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGF 362
G+ +LR++L +LA + L+ ID + G +R G+
Sbjct: 396 SAGLLPTLRQEL----------------DDLADLRGLITSAIDDDPPFSVREGGFIRAGY 439
Query: 363 CDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
++D LR I + EV + E + K + V Y GY + + + D
Sbjct: 440 NADVDYLRNIMTNGKGMVAEVEAREKEKTG--IKSLKVG---YNKVFGYYIEVSKSYYDQ 494
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
++ A + Y T + +++++ + +++ +E + D+
Sbjct: 495 VPDTYIRKQTLANCER--------YITQELKDMEHTILSAQDRVVALEYQLFCDVREKTA 546
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT- 540
+ ++ A LD S A VA N+Y P++ L LDI+ GRH V+++M +
Sbjct: 547 ARVQEIQRSARAVAALDVLTSFACVAADNHYCMPVVDLSDRLDIEEGRHPVVEKMLKNAL 606
Query: 541 FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
F+PND +D + + IITGPN +GKS Y++QVALI ++ +GSFVPA +A +G+ D
Sbjct: 607 FVPNDAHMDGGENLVAIITGPNMAGKSTYMRQVALIALMAQMGSFVPAKSAHIGIVDRVF 666
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
S ++A QS+FM+++ +V +L+ ATS+SL +LDE G+GT T DG+ + + Y
Sbjct: 667 TRIGASDDLSAGQSTFMVEMTEVAELLKNATSKSLLILDEIGRGTSTYDGMSIARAVLEY 726
Query: 652 FVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
+ K L TH E+ EG +P +K Y ++ + + D++FL ++V
Sbjct: 727 CADKKRLGAKTLFATHYHEITCLEGQIPG---VKNYNIAAKKRKG------DVIFLRKIV 777
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
G A SYG+ A LAGVP VI RA +LE ++ +
Sbjct: 778 RGGADQSYGVEVAKLAGVPERVITRAREILEELESGQ 814
>gi|294791813|ref|ZP_06756961.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
gi|294457043|gb|EFG25405.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
Length = 877
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 292/602 (48%), Gaps = 64/602 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A+S + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDINQIQRRQAAVSELITRGAERSHIRNFLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---AYVY 337
+ D TA +S+ L + + G SL A + I + +Y
Sbjct: 363 SPRDLTALRESLVVLPDIKNVL--GTCSSL--------------ALTSINERMQDHKDIY 406
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 407 DLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSEQWLAKMEA-DIKEATGLSK- 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
Y GY + K EQ+ + F +R Y TP+ +E +
Sbjct: 465 ---IKTGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEI 513
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ KI+ +E + + L + I L + + A+LD SLALV ++ NY+ P
Sbjct: 514 KILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSLALVGYEENYICPT 573
Query: 518 LTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVAL 574
+ + ++I++GRH + E + + F+PND +++D +ITGPN +GKS Y++Q A+
Sbjct: 574 IVMNGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDEEEFLLITGPNMAGKSTYMRQAAI 633
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ ++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL
Sbjct: 634 LMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSL 693
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFY 685
+LDE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK Y
Sbjct: 694 IILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHSKTLFATHYHELI---CLEESYSKLKNY 749
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T++V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++
Sbjct: 750 TVAV------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQ 803
Query: 746 KH 747
H
Sbjct: 804 SH 805
>gi|268611650|ref|ZP_06145377.1| DNA mismatch repair protein MutS [Ruminococcus flavefaciens FD-1]
Length = 871
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 294/616 (47%), Gaps = 81/616 (13%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ F+ LD A L++ +T ++ G S+ +++ T MGRRLL+NW +P
Sbjct: 273 DAFMGLDLNARRNLELTETLRNKEKKG--------SLLWVLDSTKTSMGRRLLKNWIEQP 324
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSPSFIYTASDW 285
+ + RL+A+ + +A L + L V D+ ++ K +P + + S
Sbjct: 325 LKSPARIIERLDAVDALYKNSVTLADLGDLLDRVYDLERLMTKVMYKSANPRDLKSLSAT 384
Query: 286 T---AFLKSICSLLHVNKIFEVGISE--SLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+K S L +K+ E +L E ++L+ E A + E
Sbjct: 385 ALQLPLIKQELSKLSGSKLLARCNEEIDTLEEMVKLV--------------ENAIMDEPP 430
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEM 398
+ + D G ++REGF ELDELR I E ++++ E + +L
Sbjct: 431 VSVKD---------GGVIREGFNQELDELRHIMGHGKEMIDDIEQREKEATGIKNLK--- 478
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y GY + + D ++ A ++ + T + + +N
Sbjct: 479 ----IGYNRVFGYYLEVTRSYYDLIPDGWIRKQTLANAER--------FITEELKNAENA 526
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K L +E I ++ + + + K + A +D S A VA +N Y++P +
Sbjct: 527 ILGAKDKALALEADIFAEVRDFLATKLESVQKTASAVATVDVLCSFADVALRNQYVKPDI 586
Query: 519 TLEPLLDIQNGRHVLQEM--TVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALI 575
++ +DI+ GRH + E+ T + F+PND IDN R++IITGPN SGKS Y++Q ALI
Sbjct: 587 AIDGAIDIKAGRHPVVELMLTEEMFVPNDIYIDNKADRMSIITGPNMSGKSTYMRQTALI 646
Query: 576 VFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLC 627
V ++ IGSFVPAD+A + + D S +TA QS+FM+++ +V +L+ AT SL
Sbjct: 647 VLMAQIGSFVPADSAKISVVDKIFTRVGASDDLTAGQSTFMVEMSEVSDILKNATPDSLV 706
Query: 628 LLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGCLPKSERLKFYT 686
+LDE G+GT T DG+ + + V + K L TH EL+ G + E +K Y+
Sbjct: 707 ILDEVGRGTSTFDGVSIARAVAEHIVNSKKLGCKTLFATHYHELI--GLENELEGVKNYS 764
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
++V + N I FL ++V G SYG+ A LAG+PA+V+ RA +L A
Sbjct: 765 IAVNKHGGN------IRFLRKIVRGGVDESYGIDVAKLAGLPAKVVSRARELL-AEMEAA 817
Query: 747 HVERWSHENISAQDQQ 762
H S + + A+++Q
Sbjct: 818 HA---SEKPVVAEERQ 830
>gi|433652396|ref|YP_007278775.1| DNA mismatch repair protein MutS [Prevotella dentalis DSM 3688]
gi|433302929|gb|AGB28745.1| DNA mismatch repair protein MutS [Prevotella dentalis DSM 3688]
Length = 878
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 292/611 (47%), Gaps = 95/611 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +K+++LD +L++ Q + +G S+ ++++ VTPMG R
Sbjct: 258 ITALQRIEEDKYVRLDRFTVRSLELLQPMQD----------DGLSLLDVIDRTVTPMGGR 307
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ + ++ R + + +F + ++ E L V D+ I+ K SP
Sbjct: 308 LLRRWLVFPLKETRSIADRQDVVDYFFRQPDFRMAVDEQLHRVGDLERIISKVAVGRVSP 367
Query: 277 SFIYTASDW---TAFLKSICSLLHVNKIFEVG----ISESLREQL-RLLNFDIVEKAASC 328
+ + +KS C + + +G + ESLRE++ R L D + A+
Sbjct: 368 REVMQLRNALMAVQPVKSDCQSAGNDSLKRLGEQLSLCESLRERIGRELQPDPPQLASK- 426
Query: 329 ITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL 388
G ++ EG+ ELDELR I ++L ++ E
Sbjct: 427 --------------------------GGVIAEGYSPELDELRAISRGGKDYLLQIQQRET 460
Query: 389 VQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
Q + + + + GY + + F ++ DT + + + +R
Sbjct: 461 EQTG-----ISSLKVGFNNVFGYYLEVRNTFRNRVPDTWIRK---------QTLAQAER- 505
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y TP+ +E + + KIL +E + +L++ + F + N A +DC LS A
Sbjct: 506 -YITPELKEYEEKILGAEEKILMLETRLFTELINDMQEFIPQIQINANVLAHIDCLLSFA 564
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPN 561
VA N Y+RPI+ +DI+ GRH + E + + ++PND R+D++ +I +ITGPN
Sbjct: 565 KVAEDNGYVRPIVDDGDAIDIRQGRHAVIETQMPLGERYVPNDVRLDSEKQQIMMITGPN 624
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALIV L+ IG FVPA+ A VG+ D S +++ +S+FM+++ +
Sbjct: 625 MAGKSALLRQTALIVLLAQIGCFVPAERAQVGVVDKIFTRVGASDNLSLGESTFMVEMTE 684
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP---PKVLVCTHLTEL 670
+L + +SL L DE G+GT T DGI + + Y + P + L TH E
Sbjct: 685 AADILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYL--HEQPRSRARTLFATHYHE- 741
Query: 671 LNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
LNE + K R+K Y +SV + ++FL L PG + S+G+H A +AG+P
Sbjct: 742 LNE--MEKHFARIKNYNVSVREVDGR------VIFLRTLQPGGSEHSFGIHVAEIAGMPR 793
Query: 730 EVIKRAAYVLE 740
++ R+ +L+
Sbjct: 794 SIVSRSKTILK 804
>gi|148270149|ref|YP_001244609.1| DNA mismatch repair protein MutS [Thermotoga petrophila RKU-1]
gi|166232148|sp|A5ILG0.1|MUTS_THEP1 RecName: Full=DNA mismatch repair protein MutS
gi|147735693|gb|ABQ47033.1| DNA mismatch repair protein MutS [Thermotoga petrophila RKU-1]
Length = 793
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/603 (26%), Positives = 287/603 (47%), Gaps = 69/603 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S ++ LD+ E L + D+ G ++F ++N TPMG RLL+ W
Sbjct: 244 ISQRDYMILDSATVENLSLIPGDR------------GKNLFDVLNNTETPMGARLLKKWI 291
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
L P++D + + RL + + + L + L V+D+ I+ + + D
Sbjct: 292 LHPLVDRKQIEERLETVEKLVSDRMNLEELRDLLSNVRDVERIVSRVEYNRSV--PRDLV 349
Query: 287 AFLKSICSLLHVNKIFEV-GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A +++ + +N+I G+ ++L RLL D++++A ++
Sbjct: 350 ALRETLEIIPKLNEILSTFGVFKNLAFPERLL--DLLQRA------------------VE 389
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
+ + G G +++ GF ELDE R + E E L+E E + +++ V Y
Sbjct: 390 DDPAGSPGEGKVIKRGFSPELDEYRDLLEHAEERLKEFEEKERKRTG--IQKLKVG---Y 444
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + LD +E + ++ E + TP+ +E + + +
Sbjct: 445 NQVFGYYIEVTKANLDKIP----DDYERKQTLVNSER----FITPELKEFETKIMAAKER 496
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
I ++E+ + +++ + + LLK A++D +LA A +Y +PI + E L+
Sbjct: 497 IEELEKELFKNVCEEVKKHKEILLKISEELAKIDVLSTLAYDAILYSYTKPIFS-EGRLE 555
Query: 526 IQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
I+ GRH + E F+ ND +DN+ R +ITGPN SGKS +I+QV LI ++ IGSFV
Sbjct: 556 IKGGRHPIVERFTQNFVENDIYMDNERRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFV 615
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A + + D + +S+F+++++++ ++L ++T +SL LLDE G+GT
Sbjct: 616 PAQKAILPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGTS 675
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
T+DG+ + + KVL TH TEL E P+ + ++L E
Sbjct: 676 TQDGVSIAWAISEELIKRGC--KVLFATHFTELTELEKHFPQVQ-----NKTILVKEEG- 727
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
++++F +++V G A SYG+ A +AG+P VI RA +LE N +
Sbjct: 728 ---KNVIFTHKVVDGVADRSYGIEVAKIAGIPDRVINRAYEILERNFKNNTKKNGKSNRF 784
Query: 757 SAQ 759
S Q
Sbjct: 785 SQQ 787
>gi|203288226|ref|YP_002223241.1| DNA mismatch repair protein [Borrelia recurrentis A1]
gi|201085446|gb|ACH95020.1| DNA mismatch repair protein [Borrelia recurrentis A1]
Length = 862
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 276/563 (49%), Gaps = 72/563 (12%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
+S++ ++N C TPMG+RLLR + L P+LD+ +N+RL + F + L L + L V
Sbjct: 289 YSLYSVLNDCKTPMGKRLLREYILNPLLDIGAINNRLFHVEFLSNNVNLSMQLRDILSDV 348
Query: 264 KDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLRLL 317
DI I +KK+ F++ AF + E L E +
Sbjct: 349 WDIERIISRLQMKKYVKKDFLFIKETLLAFF---------------SVKELLNEYSFKYW 393
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
FD+ ++ T + VY L ID + S E+ L++ G+ ++D LR+I
Sbjct: 394 IFDVNDE------TSIMEVYSL----IDSSISNEQE--ELIKHGYNVKIDRLREIKNNAS 441
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
+++++ + E ++ + I + FE + + Q+ F S
Sbjct: 442 KYIDDYLNFE--------RDFNKINSLKIKRTNIKGLFFE--VTKSYYGQVPS-HFIESQ 490
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
KR Y T K EL+ + D +L E+ I ++ + +S + K F A
Sbjct: 491 NLNSAKR--YKTNKLIELERDINDAEDNLLAFEQEIFDEIALRVVKYSVIIKKIAEFFAY 548
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE---MTVDTFIPNDTRIDNDGRI 554
+D + A +A +N Y+RPILT + ++ RH + E ++ F N +I+++
Sbjct: 549 IDVIANFAYLARKNEYVRPILTNNKEIILECARHPVVEHYMRGIEAFTKNSVKINSEKYF 608
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
+ITGPN +GKS Y++Q ALIV +SHIGSFVPA A +G+TD S +++ +S+
Sbjct: 609 CLITGPNMAGKSTYLRQTALIVLMSHIGSFVPASKAIIGITDKIFCRIGASDNISKGEST 668
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
F++++++ +LR AT SL ++DE G+GT T DG+ + + Y + + + L TH
Sbjct: 669 FLVEMNETANILRNATQNSLIIMDEVGRGTSTNDGLAIAYSIVEYILK-HIKARSLFATH 727
Query: 667 LTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
EL +N F +S ++ E ++++FL + +L SYG++ A +
Sbjct: 728 FHELSAINHDS--------FVNLS-MKIEQQG---DELIFLREVEEKPSLNSYGIYVAQI 775
Query: 725 AGVPAEVIKRAAYVLEAAQNNKH 747
AG+P EV+KRA +L++ + +H
Sbjct: 776 AGIPLEVVKRANIILKSLTSREH 798
>gi|317131677|ref|YP_004090991.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
gi|315469656|gb|ADU26260.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
Length = 871
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 182/637 (28%), Positives = 298/637 (46%), Gaps = 75/637 (11%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
G E VRA LLA L +I LE+ ++ + S +F++LD + L+
Sbjct: 230 GKEPAVRALNALLAYLRQTQITG-LER---------LNQLDVYSDAQFMRLDLSTRRNLE 279
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + GR K G ++ ++++ T MG+RLLR W +P+L + RL A+
Sbjct: 280 LCETLR-------GREKRG-TLLWVLDRTKTAMGKRLLRAWIEQPLLHPGPITRRLAAVD 331
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
L + E L V D+ ++ + +Y TA + + +L +
Sbjct: 332 ELFSDAVLREDVMEILDGVHDLERLMTRI-----VY----GTANARELRALAET-----I 377
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G L+E++ ++ A I L ++EL+ ++ + G L+R G+
Sbjct: 378 GRLPGLKERVAPCKARLLSDIARNIDP-LPDLFELITKAVEEDPPVSVREGGLIRPGYHA 436
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
E+D LR+I FL EV + E + K + I Y GY + + + +
Sbjct: 437 EIDSLREIMRGGKGFLAEVEAREKEKTG--IKNLK---IGYNRVFGYYIEVTKSNIAQVP 491
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+ ++ + Y T + +EL+ + +++ +E + + +
Sbjct: 492 EDYIRKQTLTNCER--------YITQELKELEGRVLGAQERVVQLEYDVFDGVRRQVAEQ 543
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFI 542
+ A LD S A A N Y RP L ++ + I++GRH + E + F+
Sbjct: 544 LHRIQSTAGALAGLDVLCSFAQAAAMNRYCRPDLGVDGRISIKDGRHPVVEAILSGVPFV 603
Query: 543 PNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
PNDT +D DG R+ IITGPN +GKS Y++QVALI ++ IGSFVPA AA +G+ D
Sbjct: 604 PNDTELDMDGDRVAIITGPNMAGKSTYMRQVALITLMAQIGSFVPASAAHIGVVDSIFTR 663
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S + + QS+FM+++ +V +L AT SL LLDE G+GT T DG+ + + +
Sbjct: 664 VGASDDLASGQSTFMVEMTEVASILENATQNSLVLLDEIGRGTSTFDGMSIARAVVEHVA 723
Query: 654 ---TCDVPPKVLVCTHLTEL-LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
C K L TH EL + E L ++ Y+++V E++ FL R++
Sbjct: 724 DLKRCGA--KTLFATHYHELTVLEDQLSG---VRNYSVAV------KKHGEELTFLRRII 772
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAAQ 743
PG A SYG+ A LAG+PA V+ RA + LEA Q
Sbjct: 773 PGGADDSYGIEVAKLAGIPARVVTRAREILRELEAGQ 809
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 306/642 (47%), Gaps = 94/642 (14%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEAL 183
G + ASG LL L DTL N SI I+++ S N+++ LD L
Sbjct: 229 GMAAGINASGALLHYLR-----DTL------NLSIDHINTISTYSTNEYMTLDRMTQTNL 277
Query: 184 QIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAI 243
++ ++ + ++ ++++ TPMG RL+ W RP+L ++ + +R +A+
Sbjct: 278 ELTRS--------LQDGTRKHTLLSILDQTCTPMGGRLILQWLKRPLLCMKTIQARQDAV 329
Query: 244 SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE 303
F+ + L +L+ V+DI ++ K ++ A K I +L H I
Sbjct: 330 QSFIERDWTHDQLKASLEDVRDIERLMMKVSANY---------ASPKDIAALRH--SIEP 378
Query: 304 VG-ISESLREQLRLLNFDIVEKAASCITT---ELAYVYELVIGIID--VNRSKEK-GYGT 356
+G I LRE A+S I T +L + EL+ I + V+ +K G
Sbjct: 379 LGKIKSLLREP---------AAASSLIQTHEKQLNPLPELISLIANALVDEPPQKLSDGN 429
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVAS-----LELVQLPHLCKEMFVPCI-VYIHQIG 410
+ R+GF ELDE+R+I +L + L++ L MF I V Q G
Sbjct: 430 IFRKGFHQELDEIREISANSKSWLNNYQNKLREELDIKNLKVGFNRMFGYYIEVSKGQAG 489
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ FE + E+ + T +E + + KI +E
Sbjct: 490 KVPESFERRQTLVNAER-------------------FITKDLKEYEQKVLTAEEKISSIE 530
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ + + L + + ++D ++K A +DC +LA A + Y RP + L+I GR
Sbjct: 531 QELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLHGYQRPEIDQSQRLEITEGR 590
Query: 531 H-VLQEMTVD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H V++ + ++ F+PNDT +D++ R+ +ITGPN +GKS YI+QVALI ++ IGSFVPA
Sbjct: 591 HPVIEAVNMNEKFVPNDTLLDDENNRLLLITGPNMAGKSTYIRQVALITIMAQIGSFVPA 650
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
A +GL D S ++ QS+FM+++ + +L AT +SL +LDE G+GT T
Sbjct: 651 KTAHIGLVDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATDRSLVILDEIGRGTSTY 710
Query: 640 DGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DGI + + +T + + L TH EL E +P + Y ++V E++
Sbjct: 711 DGISIAWSVAEFLLTEEGSTARTLFATHYCELTKLEEKIPGAVN---YNVAVHESEDS-- 765
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
I+FL ++V G SYG+H A LAG+P VI+RA +L
Sbjct: 766 ----IIFLRKIVKGGTDKSYGIHVARLAGLPLPVIERAKEIL 803
>gi|302874906|ref|YP_003843539.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|307690474|ref|ZP_07632920.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|302577763|gb|ADL51775.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
Length = 901
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 169/604 (27%), Positives = 300/604 (49%), Gaps = 62/604 (10%)
Query: 152 KESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMM 210
KE+ A ++ I+++ + FL +D + L++ +T + + G S+ ++
Sbjct: 238 KETQKADLSHINTLNIYEIEDFLSIDINTRKNLELTETQRDKTKKG--------SLLWVL 289
Query: 211 NKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHIL 270
+K T MG R LR W +P+++ + RL A++ + + L L LK + DI ++
Sbjct: 290 DKTSTAMGARELRKWIDQPLINKNAIELRLEAVAELVSNLSLQEELKVLLKDIYDIERLV 349
Query: 271 KKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCIT 330
K +S S A + + SI + + + + S L+E N D
Sbjct: 350 GKVSSKSV--NAKELLSIKSSISKIPAIKTLLKQCTSSYLQEIYN--NLD---------- 395
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ 390
EL+ + EL+ ID + + G L++EG+ E+D+L+ ++ +L E+ + E +
Sbjct: 396 -ELSDIEELLEKSIDESPAITLKEGNLIKEGYNSEIDQLKVAKKDGKLWLSELEARE--K 452
Query: 391 LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
K + V + GY + ++ T L + + +R Y T
Sbjct: 453 ETTGIKSLKVS---FNKVFGYYI-----EVTKTNLNMVPEHRYIRKQTLANCER--YITD 502
Query: 451 KTRELDNLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
+ +++++++ K++ +E + R+LV L + ++ A +DC SLA+V
Sbjct: 503 ELKKMEDIILGAEEKLISLEYDVFVEVRELVLKEVL---RMQQSARLIATIDCLNSLAIV 559
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDND-GRINIITGPNYSG 564
A +NNY RP + + +++I+ GRH + E + T FI N +D + ++ IITGPN G
Sbjct: 560 ALENNYTRPAIDVSGIINIKEGRHPVVEKLLPTGNFISNSISLDREENQLLIITGPNMGG 619
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS Y++Q ALI ++ IGSFVPA++AT+G+ D S + +S+FM+++ +V
Sbjct: 620 KSTYMRQCALITIMAQIGSFVPAESATIGICDKVFTRIGASDDLAGGKSTFMVEMWEVAN 679
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC-DVPPKVLVCTHLTELLNEGC 675
+L AT+ SL LLDE G+GT T DG+ + I + T +V K L TH EL
Sbjct: 680 ILNNATNNSLVLLDEVGRGTSTYDGLSIAWAVIEFLTTNKNVKCKTLFATHYHELTK--L 737
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ +K Y++ V + E+I+FL+++V G A SYG+ A LAG+P V+ R+
Sbjct: 738 EAEFSGVKNYSVGVKKIG------EEIIFLHKIVKGAADESYGIEVARLAGLPQAVLDRS 791
Query: 736 AYVL 739
+L
Sbjct: 792 KEIL 795
>gi|325268300|ref|ZP_08134933.1| DNA mismatch repair protein MutS [Prevotella multiformis DSM 16608]
gi|324989442|gb|EGC21392.1| DNA mismatch repair protein MutS [Prevotella multiformis DSM 16608]
Length = 887
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 287/604 (47%), Gaps = 81/604 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ VTPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGASLLDVIDNTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + + E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDAKPINERLDVVDYLFREPDFRECIDEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K+ C + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTACLYAKSETLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
A G ++ G+ +LDELR I + ++L E+ E Q
Sbjct: 434 A------------------AKGNVIAPGYDRQLDELRSIRDNGKQYLLEIQEKEAEQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ I + + GY + + F++K+ + + + + +R Y TP
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPENWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KIL ME + +L+ + F + N A LDC LS V+ Q
Sbjct: 520 ELKEYEEKILGADEKILAMEGQLFMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQQ 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKS 566
Y+RP++ +LDI+ GRH + E + + ++PND +D + +I +ITGPN +GKS
Sbjct: 580 QRYVRPVVDGSEVLDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLP 677
T +SL L DE G+GT T DGI + + Y + L TH E LNE +
Sbjct: 700 NNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRAQARTLFATHYHE-LNE--ME 756
Query: 678 KS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
KS R++ + +SV + I+FL +L PG + S+G+H A +AG+P ++KRA
Sbjct: 757 KSFPRIRNFNVSVKEVDGK------IIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVKRAN 810
Query: 737 YVLE 740
+L+
Sbjct: 811 VILK 814
>gi|334340541|ref|YP_004545521.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
gi|334091895|gb|AEG60235.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
Length = 869
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 166/593 (27%), Positives = 280/593 (47%), Gaps = 70/593 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + F+ LD A L+I + + G S+ G+++ T MG R
Sbjct: 254 ITSISRYTPGSFMVLDGVARRNLEISRDIRDGEKKG--------SLLGVLDATKTAMGGR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W +P++D+ +N RL+A++ + S L L ++LK++ D+ + K S
Sbjct: 306 MLRRWLEQPLIDINRINDRLDAVAELVHSALLRDELTQSLKHIYDLERLTAKAAYGS--A 363
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS---CITTELAYVY 337
D A L S+ L LR+ L+ ++ K C+T +
Sbjct: 364 NGRDMLALLASLEKL------------PLLRQALKDCQCSLLRKIYDRFDCLTD----LK 407
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
EL+ + N G L++ GF E+D+LR + +L ASLE + +
Sbjct: 408 ELLNVALAENPPVSLREGGLIKTGFHPEVDQLRSAARDGKNWL---ASLEAREREKTSIK 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
+ + GY + + L+ L + +R TP +E ++
Sbjct: 465 SL--KVGFNKVFGYYLEVTRANLN------LVPDYYQRRQTLANAERFI--TPDLKEYES 514
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
++ +++D+E + DL + + D + A +D ++LA VA + Y+RP
Sbjct: 515 MILGAEDRLVDLEYTLFVDLRNRVAAEVDRIQNTAILLATVDTLVALAEVASRQGYVRPE 574
Query: 518 LTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDND-GRINIITGPNYSGKSIYIKQVAL 574
+T + ++DI GRH + E+ + F+PNDT +D R+ +ITGPN GKS Y +QVA
Sbjct: 575 ITDDGVIDILEGRHPVVEIALGPGGFVPNDTLLDGGLNRLGLITGPNMGGKSTYQRQVAH 634
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IV ++ +GSFVPA A +G D S + + QS+FM+++ + ++ AT +SL
Sbjct: 635 IVLMAQVGSFVPAARAKIGTVDRIFARVGASDDLRSGQSTFMVEMQETKQIIDHATDKSL 694
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERL 682
++DE G+GT +G+ + I Y + C + L TH EL EG LP L
Sbjct: 695 VIIDELGRGTSNLEGMAIAQSVIEYLHDVIGC----RTLFSTHYHELAELEGILPG---L 747
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
K + +V R + + ++ FL +++ A SYG+HCA LAG+P E+I RA
Sbjct: 748 KNFATAV-REQGD-----EVTFLRKVIRAQASKSYGVHCAQLAGLPGEIISRA 794
>gi|385809871|ref|YP_005846267.1| MutS family mismatch repair protein [Ignavibacterium album JCM
16511]
gi|383801919|gb|AFH48999.1| MutS family mismatch repair protein [Ignavibacterium album JCM
16511]
Length = 864
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 281/593 (47%), Gaps = 81/593 (13%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ LD + L+I + + + G S+ +++K T MG RLL+ W P+
Sbjct: 257 YMILDYSTKRNLEIITSMQEGTREG--------SLISILDKTQTAMGGRLLKKWISAPLR 308
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSPSFIY---TASD 284
D+ +N RLNA+ + + L L LK + D+ ++ K +P I T+
Sbjct: 309 DVNAINQRLNAVENLIKEKSLRKDLINQLKEIGDLERLISKVCTGRANPREIIAVKTSLK 368
Query: 285 WTAFLKSICSLLHVNKIFEVGIS-ESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
+K + + L + + +VG S + L E + ++ I++ + +T
Sbjct: 369 KIPVVKELLNKLSDSTLKKVGDSLKDLTELVEKISDAIIDSPPASLTE------------ 416
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV--ASLELVQLPHLCKEMFVP 401
G +++ GF ELDELR+I E++ + E +P L
Sbjct: 417 -----------GGIIKSGFSPELDELREIAFHGKEWISNLQQKERERTGIPSLK------ 459
Query: 402 CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
+ + + GY + I + ++ S+ Y TP+ + + +
Sbjct: 460 -VGFNNVFGYYIDISNAHKSKVPADYIRKQTLVNSER--------YITPELKTFEEKILH 510
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
KI ++E + ++ + + L ++ + LD FLS A A + NY++P +
Sbjct: 511 AEEKIGELEYQLFNEIRNLVALEAESIQTNARLIGMLDVFLSFAECAEEYNYVKPEVDEG 570
Query: 522 PLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
++I GRH + E + + F PND +++N D +I ++TGPN +GKS+Y++QV LIV
Sbjct: 571 NEIEILQGRHPVVERILSPGEKFTPNDCKLNNSDQQIILLTGPNMAGKSVYLRQVGLIVL 630
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ IGSFVPA A +G+ D S ++TA +S+F++++ + +L ATS+SL LL
Sbjct: 631 LAQIGSFVPASKAKIGIVDRIFTRVGASDNITAGESTFLVEMQEAANILNNATSKSLILL 690
Query: 630 DEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNE--GCLPKSERLKFYT 686
DE G+GT T DGI + Y DV K L TH E LNE P R+K Y
Sbjct: 691 DEIGRGTSTFDGISIAWAITEYLHENPDVAAKTLFATHYHE-LNEMADLFP---RIKNYK 746
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ V ++ ++FL+R+ PG A SYG+ A++AG+P V RA +L
Sbjct: 747 VEVREYDDK------VIFLHRVNPGRADHSYGIQVAMMAGLPVFVTNRAKEIL 793
>gi|354557463|ref|ZP_08976721.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
gi|353550257|gb|EHC19694.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
Length = 849
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 268/555 (48%), Gaps = 51/555 (9%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G+ K+G ++ +++ T G RLLR W +P+L + + RLN IS L L
Sbjct: 268 GQGKKG-TLLSVLDFTKTAFGGRLLRRWIEQPLLSKQEIEHRLNIISDLTEDSFLRGDLA 326
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL-RL 316
+ L + D+ ++ K + + A D A +++ +L + SESL+ L L
Sbjct: 327 QFLTGIYDLERLMGKVSFGT--AHARDLLALKQTLSTLPKIRSSLFASHSESLKNYLAHL 384
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D EL E + I KE G L+++G+ E+D+LR
Sbjct: 385 TGLD-----------ELGEELENALNIEAPLSLKE---GNLLKDGYSPEIDQLRGTSSGG 430
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
++ VA LE + + Y GY + + QL E+
Sbjct: 431 KDW---VAQLEAQEKERTGIRSL--KVGYNKVFGYYIEVTHAN------AQLVPPEYIRK 479
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+R TP+ +E + + K++ +E + ++ + ++ A + A
Sbjct: 480 QTLANAERFI--TPELKEYEQKILGAEDKLIQLEYQLFLEIRETVRRHIPQIMDAAHALA 537
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRI 554
E+D F+SLA VA +++Y+RP +T + I GRH + E ++ TF+PNDT + +
Sbjct: 538 EIDVFVSLAEVAIRHHYVRPEITQGGKIQILEGRHPVVENMLENGTFVPNDTLLSRSKHL 597
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
+ITGPN +GKS Y++QVALIV ++ IGS++PA+ A++ + D S + + QS+
Sbjct: 598 ALITGPNMAGKSTYMRQVALIVLMAQIGSYIPAEKASISIVDHIFTRVGASDDLASGQST 657
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
FM+++ +V +L T SL +LDE G+GT T DG+ + Y V PK L TH
Sbjct: 658 FMVEMREVAYILHHVTEHSLVILDEVGRGTATFDGLSIAWAVTEYLADQKVKPKTLFATH 717
Query: 667 LTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
EL + E LP + + V E+ EDI+FL++++ G A SYG+ A LA
Sbjct: 718 YHELTSLEESLP-----GIFNLHVGVREHG----EDIIFLHKIISGRADRSYGIQVAKLA 768
Query: 726 GVPAEVIKRAAYVLE 740
G+PA +++RA +LE
Sbjct: 769 GLPAPLLQRARIILE 783
>gi|302386431|ref|YP_003822253.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
gi|302197059|gb|ADL04630.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
Length = 884
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 291/608 (47%), Gaps = 73/608 (12%)
Query: 153 ESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMN 211
E+ +S++ I ++ S +++ +D + L++ +T + G S+ +++
Sbjct: 246 ETQKSSLSHITTITPYSTGQYMIIDTSTRRNLELLETLREKQKRG--------SLLWVLD 297
Query: 212 KCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIP 267
+ T MG R+LR + +P++ + R NAI F+ EE+ L+ + I
Sbjct: 298 RTKTAMGARMLRTYIEQPLIHKPEITKRQNAIEELNMSFISREEICEYLNPIYDLERLIG 357
Query: 268 HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
I K +P D AF S+ L H+ + + S+ L++ L+
Sbjct: 358 RISYKTANPR------DLIAFKSSLEMLPHIKNLLKEFSSDMLKDLWGELD--------- 402
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
L V EL+ I + G ++R+GF +E D+LR E +L ++ S E
Sbjct: 403 ----PLEDVRELIGRAIIDDPPVTLRDGGIIRDGFHEEADKLRSAKTEGKNWLADLESQE 458
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
+ K + V + GY + + + L F +R Y
Sbjct: 459 KEKTG--IKNLKVK---FNKVFGYYFEV------TNSFKDLVPDYFIRKQTLANAER--Y 505
Query: 448 HTPKTRELDNLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
T + +EL+N++ K+ +E ++ RD V+ L + K A +D SL
Sbjct: 506 TTDQLKELENVILGAEDKLFSLEYSLFCQVRDSVADQVL---RIQKTARAIAGIDVLTSL 562
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPN 561
+ VA +NNY++P + + L+DI+NGRH + E M D F+ NDT +DN R++IITGPN
Sbjct: 563 SSVATRNNYVKPQINEKGLIDIKNGRHPVVEKMMRDDLFVSNDTYLDNGKNRVSIITGPN 622
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS Y++Q ALIV L+ IGSFVPA+ A +G+ D S + + QS+FM+++ +
Sbjct: 623 MAGKSTYMRQTALIVLLAQIGSFVPAEEANIGICDRIFTRVGASDDLASGQSTFMVEMTE 682
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN 672
V +LR AT SL +LDE G+GT T DG+ + + + + K L TH EL
Sbjct: 683 VANILRNATKNSLIVLDEIGRGTSTFDGLSIAWAVVEHISNPKILGAKTLFATHYHELTE 742
Query: 673 -EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
EG + + Y ++V +DIVFL +++ G A SYG+ A LAGVP V
Sbjct: 743 LEGTMSG---VNNYCIAV------KEQGDDIVFLRKIIKGGADKSYGVQVAKLAGVPDSV 793
Query: 732 IKRAAYVL 739
I RA +L
Sbjct: 794 IVRAKELL 801
>gi|383810732|ref|ZP_09966220.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 306
str. F0472]
gi|383356580|gb|EID34076.1| DNA mismatch repair protein MutS [Prevotella sp. oral taxon 306
str. F0472]
Length = 886
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 165/601 (27%), Positives = 288/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + G G S+ +++ +TPMG R
Sbjct: 268 ITSLTRIEEDKYVRMDRFTVRSLELVA----PMNEG------GSSLLNVIDNTITPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D+ +N RL+ + F + + ++ E + D+ I+ + SP
Sbjct: 318 MLRRWVVFPLKDVAVINERLDIVDHFFRASDFRNNIDEQFHQMGDLERIISRVAVGRVSP 377
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ + L + K E+ +E L + LN I E+ C A +
Sbjct: 378 -------------REVVQLKNALKAIELVKAECLSTNNKSLN-RIGEQLNLC-----ASL 418
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
+ + I+V+ + G ++ G+ ELD+LR I + ++L E+ E+ Q
Sbjct: 419 RDRIEKEINVDPPQLVAKGDVIASGYDKELDDLRSIRDNGKQYLLEIQEKEIAQTGISSL 478
Query: 396 KEMFVPCIVYIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
K F Y ++ + + E+ + TL Q + Y TP+ +
Sbjct: 479 KVGFNNVFGYYLEVRNTFKNKVPEDWIRKQTLAQAER----------------YITPELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL E + +L+ + F + N A LDC LS +A Q +Y
Sbjct: 523 EYEEKILGADEKILAREGQLFMELIQDMQSFIPQIQVNANLVAHLDCLLSFMKIALQQHY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP + +LDI GRH + E + + ++PND ++D + +I +ITGPN +GKS +
Sbjct: 583 VRPTVDESDVLDIHQGRHPVIETQLPIGEQYVPNDVKLDTEHQQIMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQIGCFVPAERARIGIVDKIFTRVGASDNISLGESTFMVEMTEAANILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
T++SL L DE G+GT T DGI + + Y + L TH E LNE + K+
Sbjct: 703 TTRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKAQARTLFATHYHE-LNE--MEKNF 759
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV + I+FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 760 SRIKNYNVSVKEVDGK------IIFLRKLTRGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 E 740
+
Sbjct: 814 K 814
>gi|340347197|ref|ZP_08670309.1| DNA mismatch repair protein MutS [Prevotella dentalis DSM 3688]
gi|339609767|gb|EGQ14630.1| DNA mismatch repair protein MutS [Prevotella dentalis DSM 3688]
Length = 888
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 292/611 (47%), Gaps = 95/611 (15%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +K+++LD +L++ Q + +G S+ ++++ VTPMG R
Sbjct: 268 ITALQRIEEDKYVRLDRFTVRSLELLQPMQD----------DGLSLLDVIDRTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ + ++ R + + +F + ++ E L V D+ I+ K SP
Sbjct: 318 LLRRWLVFPLKETRSIADRQDVVDYFFRQPDFRMAVDEQLHRVGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDW---TAFLKSICSLLHVNKIFEVG----ISESLREQL-RLLNFDIVEKAASC 328
+ + +KS C + + +G + ESLRE++ R L D + A+
Sbjct: 378 REVMQLRNALMAVQPVKSDCQSAGNDSLKRLGEQLSLCESLRERIGRELQPDPPQLASK- 436
Query: 329 ITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL 388
G ++ EG+ ELDELR I ++L ++ E
Sbjct: 437 --------------------------GGVIAEGYSPELDELRAISRGGKDYLLQIQQRET 470
Query: 389 VQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
Q + + + + GY + + F ++ DT + + + +R
Sbjct: 471 EQTG-----ISSLKVGFNNVFGYYLEVRNTFRNRVPDTWIRK---------QTLAQAER- 515
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y TP+ +E + + KIL +E + +L++ + F + N A +DC LS A
Sbjct: 516 -YITPELKEYEEKILGAEEKILMLETRLFTELINDMQEFIPQIQINANVLAHIDCLLSFA 574
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPN 561
VA N Y+RPI+ +DI+ GRH + E + + ++PND R+D++ +I +ITGPN
Sbjct: 575 KVAEDNGYVRPIVDDGDAIDIRQGRHAVIETQMPLGERYVPNDVRLDSEKQQIMMITGPN 634
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQ 613
+GKS ++Q ALIV L+ IG FVPA+ A VG+ D S +++ +S+FM+++ +
Sbjct: 635 MAGKSALLRQTALIVLLAQIGCFVPAERAQVGVVDKIFTRVGASDNLSLGESTFMVEMTE 694
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP---PKVLVCTHLTEL 670
+L + +SL L DE G+GT T DGI + + Y + P + L TH E
Sbjct: 695 AADILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYL--HEQPRSRARTLFATHYHE- 751
Query: 671 LNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
LNE + K R+K Y +SV + ++FL L PG + S+G+H A +AG+P
Sbjct: 752 LNE--MEKHFARIKNYNVSVREVDGR------VIFLRTLQPGGSEHSFGIHVAEIAGMPR 803
Query: 730 EVIKRAAYVLE 740
++ R+ +L+
Sbjct: 804 SIVSRSKTILK 814
>gi|348026753|ref|YP_004766558.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
gi|341822807|emb|CCC73731.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
Length = 857
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 173/603 (28%), Positives = 285/603 (47%), Gaps = 71/603 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+S+ + ++ L +DA + L+I Q + G ++ +++K T MG R
Sbjct: 246 INSLEHIDNDRRLVVDAASLRHLEITQNVRDGGRRG--------TLLDVLDKTQTAMGGR 297
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W P++ + ++ R +A+ F+ E + + L + D IL + + +
Sbjct: 298 LLRKWLEAPLIRIADITRRQDAVEDFVLHEIMRQDTADVLNRIYDFERILTRIETGTV-- 355
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQL--RLLNFDIVEKAASCITTELAYVYE 338
+ D A +S+ + + + G S L L RL D VY+
Sbjct: 356 SPKDLVALRESLAVIPQLKNVL-AGASADLLHNLNDRLQTHD--------------DVYD 400
Query: 339 LVI-GIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
L+ GI D E G G ++R+GF ELDE+R I FL+E+ E +
Sbjct: 401 LLCRGIKD-----EPGLVIRNGGVIRDGFSPELDEIRSIAANSHAFLQELEEKEKEKTGI 455
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
K I Y GY FE + + + + + + Y TP+ +
Sbjct: 456 KMK------IGYTKVFGYY---FE--ISHANTKPIPDYYVRKQTLVNAER---YITPELK 501
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + ++L +E + D+ I + A +DC SLA A+ N Y
Sbjct: 502 EFEVKVLTSQERMLALEYKLFGDIRRQIQGHIPAMQATARAIARIDCLYSLACAAYDNRY 561
Query: 514 MRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIK 570
+RP L + + I++GRH + E + + F+PND +++ D I +ITGPN +GKS Y++
Sbjct: 562 VRPSLNTKATISIKDGRHPIIEKYLKDELFVPNDVTLNHEDHEILVITGPNMAGKSTYMR 621
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
QVA++V ++ +GSF+PA ++ D S + QS+FM+++ +V +L+ AT
Sbjct: 622 QVAVLVLMAQVGSFIPAKEGSICPVDRIFTRIGASDDILTGQSTFMMEMKEVSYILKHAT 681
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
S+SL +LDE G+GT T DG+ + I Y + + L TH EL+ S ++
Sbjct: 682 SRSLLILDEIGRGTSTFDGMSIARAVIEYCLK-HIHALTLFATHYHELI--AMADDSPKI 738
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K YT++V N I FL R++PG A SYGLH A LAG+P ++KRA +LE
Sbjct: 739 KNYTVAVKERGKN------IKFLRRIIPGGADRSYGLHVARLAGLPESLLKRADVILEDL 792
Query: 743 QNN 745
+ N
Sbjct: 793 EKN 795
>gi|374995728|ref|YP_004971227.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
gi|357214094|gb|AET68712.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
Length = 850
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 279/564 (49%), Gaps = 70/564 (12%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G K+G ++ +++ T G RLLR+W +P+L + + RL++I + L L
Sbjct: 268 GVGKKG-TLLSVLDLTKTAFGGRLLRHWIDKPLLLQDEIEGRLDSIQELISDSFLRKDLL 326
Query: 258 ETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
+ L V D+ ++ K + + + + + A L +CSLL ++ +E+L+ +
Sbjct: 327 KLLSEVYDLERLMGKVSYGTANAKDLLSLTQTLALLPDLCSLLSSSR------AETLKTK 380
Query: 314 LRLLNF--DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQ 371
+ +L V K + I I + D G +++ G+ E+D+LR+
Sbjct: 381 VPMLGGLETFVAKLKNAINPAPP------ISLRD---------GNIIKTGYSREVDQLRE 425
Query: 372 IYEELPEFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLE 426
I E+L ++ + E + L ++F I H +L I +E TL
Sbjct: 426 IASGGKEWLAQLENAERERTGIRSLKIGYNKIFGYYIEVTHANAHL--IPKEYQRKQTLA 483
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
+ F TP+ ++ + + K+ D+E + L + L +
Sbjct: 484 NAERF----------------ITPELKDYELKIVGAEEKLKDLEYELFLALREEVRLQTK 527
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEM-TVDTFIPN 544
+++ AE+D F+SL+ VA +N+Y+RP + + + I GRH V++EM + F+PN
Sbjct: 528 RIIQVAQILAEIDVFVSLSEVAVRNHYVRPQIKNDGEILITEGRHPVVEEMLEQNLFVPN 587
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
DT + + +ITGPN +GKS Y++QVALIV ++HIGSFVPA A + L D
Sbjct: 588 DTHLSESQHLALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKNAGISLVDRIFTRVGA 647
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-C 655
S + A QS+FM+++ +V +L+ A+ +SL +LDE G+GT T DG+ + + V
Sbjct: 648 SDDLAAGQSTFMVEMQEVAHILKYASPKSLIILDEIGRGTATYDGLSIAWAVTEHLVKHP 707
Query: 656 DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALL 715
+ PK L TH EL + E + + V E EDIVFL++++PG A
Sbjct: 708 EFRPKTLFATHYHELTQL----QDEFAGLFNLHVGVKERG----EDIVFLHKILPGRADR 759
Query: 716 SYGLHCALLAGVPAEVIKRAAYVL 739
SYG+ A LAG+P E+++RA +L
Sbjct: 760 SYGIQVARLAGLPPELLQRAKTLL 783
>gi|281424692|ref|ZP_06255605.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
gi|281401062|gb|EFB31893.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
Length = 886
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 296/624 (47%), Gaps = 86/624 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K+++LD +L++ + ++G S+ ++++ VT MG R
Sbjct: 267 ITSLSRIEEDKYVRLDRFTIRSLELVAPMQ----------EDGSSLLNVIDRTVTAMGGR 316
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D+ +N RL+ + +F E + E L V D+ I+ K SP
Sbjct: 317 MLRRWLVFPLKDVAPINERLDIVDYFFQKPEFRQLIDEQLHRVGDLERIISKVAVGRVSP 376
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
I A D +K C + +G EQL L E + I E
Sbjct: 377 REIVQLKNALDAVRPIKEACLYSENEALKRIG------EQLNL-----CESIKTRIEKE- 424
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
I ++ + G ++ +G+ DELDELR++ ++L ++ E
Sbjct: 425 ----------IQLDPPQLITKGDVIADGYDDELDELREMSRNGKDYLLKIQEKE------ 468
Query: 394 LCKEMFVPC--IVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+E + + + + GY + + F++K+ + + + + +R Y
Sbjct: 469 -AEETGISSLKVGFNNVFGYYLEVRNTFKDKVPEGWIRK---------QTLAQAER--YI 516
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
TP+ +E + + KIL +E + +LV + F + N A +DC LS A +
Sbjct: 517 TPELKEYEEKILGAEEKILALEARLFSELVLAMQDFIPQIQINANLLARVDCLLSFAKTS 576
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSG 564
+N Y+RP + +LDI GRH + E + + ++PND +D + I +ITGPN +G
Sbjct: 577 EENGYIRPQIDDSEVLDISQGRHPVIETQLPLGERYVPNDVYLDTQKQQIMMITGPNMAG 636
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS ++Q ALIV L+ +G FVPA+ A +GL D S +++ +S+FM+++ +
Sbjct: 637 KSALLRQTALIVLLAQVGCFVPAERAKIGLVDKIFTRVGASDNLSLGESTFMVEMTEASN 696
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGC 675
+L +S+SL L DE G+GT T DGI + + Y + L TH E LNE
Sbjct: 697 ILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFATHYHE-LNE-- 753
Query: 676 LPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
+ K+ R+K Y +SV + ++FL +L+ G + S+G+H A +AG+P ++KR
Sbjct: 754 MEKNFSRIKNYNVSVKEVDGK------VIFLRKLMKGGSEHSFGIHVAEIAGMPRSIVKR 807
Query: 735 AAYVL-EAAQNNKHVERWSHENIS 757
A +L E +N V R N S
Sbjct: 808 ANAILKELEADNAGVGRAGKPNTS 831
>gi|288932103|ref|YP_003436163.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
gi|288894351|gb|ADC65888.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
Length = 820
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 174/600 (29%), Positives = 286/600 (47%), Gaps = 83/600 (13%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++++ LD+T + L+IF+ G ++ +++K VT MG RLL+ W RP
Sbjct: 247 SEYMVLDSTTIKNLEIFRNLVDGGRRG--------TLLDVIDKTVTAMGSRLLKKWLQRP 298
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+LD+ + RL+A+ + L ETL+ V D+ I+ + D A
Sbjct: 299 LLDVTEIERRLDAVEELKEKSFVRRVLRETLEDVYDLERIITRLELGK--ANPKDLVALK 356
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ ++ + K + ++LR L + + C E A V + + D
Sbjct: 357 NSLKAVGKIKKF------DFQSKKLRDLVYGMNPMEELCSLIEKAIVEDPPANVKD---- 406
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIH 407
G ++REGF +ELDELR+ +E EF++ + E + + +L + Y +
Sbjct: 407 -----GGVIREGFDEELDELRKAKKEQEEFIKRLEERERKRTGIDNL-------RVGYNN 454
Query: 408 QIGYLMCIFEEK--------LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
GY + I + K + TL + F ++ +++ + + R L+
Sbjct: 455 VFGYYIEIPKSKAKNLPRYYIRKQTL--VNAERFTIPELKDREEKILAYEERIRILEQ-- 510
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+I+ + I R++V H ++ + + AELD SLA VA NY RP +
Sbjct: 511 -EIFER-------IRREVVRH----AEKVKDSAERVAELDVLCSLAEVATLYNYTRPKVN 558
Query: 520 LEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLS 579
+ I++GRH E T F+PND + + RI IITGPN +GKS Y++QVALI L+
Sbjct: 559 EGFDIIIRDGRHPAVETTT-KFVPNDVNLTENSRILIITGPNMAGKSTYLRQVALITILA 617
Query: 580 HIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IGSFVPA A VG+ D +T +S+FM+++ ++G +L AT +SL LLDE
Sbjct: 618 QIGSFVPASYAVVGIVDKIFTRIGLVDDITRGRSTFMVEMLEIGRILNNATKRSLILLDE 677
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMS 688
GK T T++G+ L I Y ++ KVL TH L++L NE K+ +
Sbjct: 678 VGKSTGTKEGLSLAWAIIEYL--HELGAKVLFATHYHELSKLENELAGVKNYHFR----- 730
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
L+ EN + F ++ G + SYG+ A +A +P V++RA +L + N V
Sbjct: 731 -LKEENGKVE-----FDRKIRRGFSKESYGIKIAEMANLPKRVVERAYEILNSENVNGEV 784
>gi|157110106|ref|XP_001650955.1| hypothetical protein AaeL_AAEL005494 [Aedes aegypti]
gi|108878809|gb|EAT43034.1| AAEL005494-PA [Aedes aegypti]
Length = 777
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 174/686 (25%), Positives = 317/686 (46%), Gaps = 52/686 (7%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
V SYYD +++ ++ D + L+ + Q +P ++ +SFL + G
Sbjct: 25 VAASYYDVDQLEIYAIQQAADQGPQYALVGNLIRQYKP--LFYLVSGSKSFLEDVPELLG 82
Query: 74 TTEAPTVKLVKSSIFSYEQ--------------AWHRLIYLRVTGMDDGLSIKERICYLN 119
++ + S + E+ + +++ + + G+ + ER Y+
Sbjct: 83 LPNGTVLQHINSGKITCEEKARYCDFGPKAIKASISKVLSMNLPGIHQQATESERRLYME 142
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
S++ ++ + + G LL +++D+L S N + + + ++ L +D
Sbjct: 143 SVLPFSQDLLIHSVGCLL------KLLDSLA---SDNDELIVSKINVLAPETLLVIDELT 193
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
++ALQIF + HPS S++ + N+C + +GR L N +PI +L LN R
Sbjct: 194 YQALQIFDSRLHPSGFKRNMESSPCSLYNLYNRCSSRIGRIELINLMQKPIRNLTELNER 253
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD-WTAFLKSICSLLHV 298
L+ + + + +++ Y+ ++ I + + ++ W + ++I + +
Sbjct: 254 LDTVEWLITPHN-SNFVNQMKNYISNLSRIQPLYKKVTLKRAKNNEWKSLKRNIYYVYLL 312
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
K+ S + L + V + + + +L Y + V+ D+ R + T +
Sbjct: 313 GKLCTTVREPSNDKTTIALLAEFVSQPGNVLK-QLLYTLDEVL---DLERGERDNKFT-I 367
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
+ G ELD R +E L E + LE+ LP ++FV + GY
Sbjct: 368 KPGIDRELDGFRAQLDETQTALLETSRLEIENLPIDADDVFVTFLP-----GYGFVFSTT 422
Query: 419 KLDDTTLEQLQGFEFAFSDMDGET-KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
+ D LE E ++ ++ +++ R L+ G + I D E+AI L
Sbjct: 423 RTDG--LENPSSIESTTMNVVCQSDTTVYFQNDLCRLLNTKFGGLLASISDHEQAILEKL 480
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
V++I LL N +A+LD L+ A VA Y RP+L +L I+ GRH L E+
Sbjct: 481 VTYIDRIIPELLDIFNVSAKLDVMLAFASVAETQKYSRPVLCDRKVLQIKQGRHPLLEL- 539
Query: 538 VDTFIPNDTRIDNDGR--INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+ PNDT + + + I+ P+ SGK++Y+K++ALI +L+HIGSFVPA AA VGL
Sbjct: 540 YKPYHPNDTDLSSTSNCLVKILASPDPSGKTVYLKEIALICYLAHIGSFVPAQAAIVGLL 599
Query: 596 DS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
DS + + + +SSFM +L+Q+ +L TS+S+ L+DEFGKGT +G LL
Sbjct: 600 DSIYSRLDFPESVFSGKSSFMSELYQISNILSNTTSRSMVLIDEFGKGTTFSEGKSLLIS 659
Query: 648 TINYFVTCDVP-PKVLVCTHLTELLN 672
++ Y + ++ P V T T + N
Sbjct: 660 SVEYLLQKEIEVPMTFVATQFTAISN 685
>gi|386860036|ref|YP_006272742.1| DNA mismatch repair protein [Borrelia crocidurae str. Achema]
gi|384934917|gb|AFI31590.1| DNA mismatch repair protein [Borrelia crocidurae str. Achema]
Length = 857
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 275/563 (48%), Gaps = 72/563 (12%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
+S++ ++N C TPMG+RLLR + L P+LD+ +N+RL + F + L L + L V
Sbjct: 284 YSLYSVLNDCKTPMGKRLLREYILNPLLDIGAINNRLFHVEFLSNNVNLSMQLRDILSDV 343
Query: 264 KDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLRLL 317
DI I +KK+ F++ AF + E L E
Sbjct: 344 WDIERIISRLQMKKYVKKDFLFIKETLLAFF---------------SVKELLNEYSFNYW 388
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
FD+ ++ T + VY L ID + S E+ L++ G+ ++D LR+I
Sbjct: 389 IFDVNDE------TSIMEVYSL----IDSSISNEQE--ELIKHGYNVKIDRLREIKNNAS 436
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
+++++ + E ++ + I + FE + + Q+ F S
Sbjct: 437 KYIDDYLNFE--------RDFNKINSLKIKRTNIKGLFFE--VTKSYYGQVPS-HFIESQ 485
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
KR Y T K EL+ + D +L E+ I ++ + +S + K F A
Sbjct: 486 NLNSAKR--YKTNKLIELERDINDAEDNLLAFEQEIFDEIALRVVKYSVIIKKIAEFFAY 543
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT---VDTFIPNDTRIDNDGRI 554
+D + A +A +N Y+RPILT + ++ RH + E ++ F N +I+++
Sbjct: 544 IDVIANFAYLARKNEYVRPILTNNKEIILECARHPVVEYYMRGIEAFTKNSVKINSEKYF 603
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
+ITGPN +GKS Y++Q ALIV +SHIGSFVPA A +G+TD S +++ +S+
Sbjct: 604 CLITGPNMAGKSTYLRQTALIVLMSHIGSFVPASKAIIGITDKIFCRIGASDNISKGEST 663
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
F++++++ +LR AT SL ++DE G+GT T DG+ + + Y + + + L TH
Sbjct: 664 FLVEMNETANILRNATQNSLIIMDEVGRGTSTNDGLAIAYSIVEYILK-HIKARSLFATH 722
Query: 667 LTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
EL +N F +S ++ E ++++FL + +L SYG++ A +
Sbjct: 723 FHELSAINHDS--------FVNLS-MKIEQQG---DELIFLREVEEKPSLNSYGIYVAQI 770
Query: 725 AGVPAEVIKRAAYVLEAAQNNKH 747
AG+P EV+KRA +L++ + +H
Sbjct: 771 AGIPLEVVKRANIILKSLTSREH 793
>gi|281412509|ref|YP_003346588.1| DNA mismatch repair protein MutS [Thermotoga naphthophila RKU-10]
gi|281373612|gb|ADA67174.1| DNA mismatch repair protein MutS [Thermotoga naphthophila RKU-10]
Length = 793
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 163/606 (26%), Positives = 282/606 (46%), Gaps = 75/606 (12%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S ++ LD+ E L + D+ G ++F ++N TPMG RLL+ W
Sbjct: 244 ISQRDYMILDSATVENLSLIPGDR------------GKNLFDVLNNTETPMGARLLKKWI 291
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
L P++D + + RL A+ + + + L ++D+ I+ + + D
Sbjct: 292 LHPLVDRKQIEERLEAVERLVNDRVSLEEMRNFLSNMRDVERIVSRVEYNRSV--PRDLV 349
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +++ + +N+I L NF + K A EL +L+ I+
Sbjct: 350 ALRETLEIIPKLNEI--------------LSNFGVFNKLA--FPEELV---DLLRRAIED 390
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIV 404
+ G G +++ GF ELDE R + E E L+ E E + L +
Sbjct: 391 DPLGSPGEGKVIKRGFSSELDEYRDLLEHAEERLKKFEEKERERTGIQKLR-------VG 443
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + + LD +E + ++ E + TP+ +E + +
Sbjct: 444 YNQVFGYYIEVTKANLDKIP----DDYERKQTLVNSER----FITPELKEFETKIMAAKE 495
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+I +ME+ + +++ + + LLK A++D +LA A NY +P+ + E L
Sbjct: 496 RIEEMEKELFKNVCEEVKKHKEILLKISEDLAKMDVLSTLAYDAILYNYTKPVFS-EDRL 554
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+I+ GRH + E F+ ND +DN+ R +ITGPN SGKS +I+QV LI ++ IGSF
Sbjct: 555 EIKGGRHPVVERFTQNFVENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSF 614
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA A + + D + +S+F+++++++ ++L ++T +SL LLDE G+GT
Sbjct: 615 VPAQKAILPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGT 674
Query: 637 LTEDGIGLLGGTINYFVT--CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPE 693
T+DG+ + + C KVL TH TEL E P+ + ++L E
Sbjct: 675 STQDGVSIAWAISEELIKRGC----KVLFATHFTELTELEKHFPQVQ-----NKTILVKE 725
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
++++F +++V G A SYG+ A +AG+P VI RA +LE N +
Sbjct: 726 EG----KNVIFTHKVVDGVADRSYGIEVAKIAGIPDRVINRAYEILERNFKNNTKKNGKS 781
Query: 754 ENISAQ 759
S Q
Sbjct: 782 NRFSQQ 787
>gi|203284693|ref|YP_002222433.1| DNA mismatch repair protein [Borrelia duttonii Ly]
gi|201084136|gb|ACH93727.1| DNA mismatch repair protein [Borrelia duttonii Ly]
Length = 862
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 275/563 (48%), Gaps = 72/563 (12%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
+S++ ++N C TPMG+RLLR + L P+LD+ +N+RL + F + L L + L V
Sbjct: 289 YSLYSVLNDCKTPMGKRLLREYILNPLLDIGAINNRLFHVEFLSNNVNLSMQLRDILSDV 348
Query: 264 KDIPHI-----LKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE-QLRLL 317
DI I +KK+ F++ AF + E L E
Sbjct: 349 WDIERIISRLQMKKYVKKDFLFIKETLLAFF---------------SVKELLNEYSFNYW 393
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
FD+ ++ T + VY L ID + S E+ L++ G+ ++D LR+I
Sbjct: 394 IFDVNDE------TSIMEVYSL----IDSSISNEQE--ELIKHGYNVKIDRLREIKNNAS 441
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
+++++ + E ++ + I + FE + + Q+ F S
Sbjct: 442 KYIDDYLNFE--------RDFNKINSLKIKRTNIKGLFFE--VTKSYYGQVPS-HFIESQ 490
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
KR Y T K EL+ + D +L E+ I ++ + +S + K F A
Sbjct: 491 NLNSAKR--YKTNKLIELERDINDAEDNLLAFEQEIFDEIALRVVKYSVIIKKIAEFFAY 548
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE---MTVDTFIPNDTRIDNDGRI 554
+D + A +A +N Y+RPILT + ++ RH + E ++ F N +I+++
Sbjct: 549 IDVIANFAYLARKNEYVRPILTNNKEIILECARHPVVEHYMRGIEAFTKNSVKINSEKYF 608
Query: 555 NIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSS 606
+ITGPN +GKS Y++Q ALIV +SHIGSFVPA A +G+TD S +++ +S+
Sbjct: 609 CLITGPNMAGKSTYLRQTALIVLMSHIGSFVPASKAIIGITDKIFCRIGASDNISKGEST 668
Query: 607 FMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH 666
F++++++ +LR AT SL ++DE G+GT T DG+ + + Y + + + L TH
Sbjct: 669 FLVEMNETANILRNATQNSLIIMDEVGRGTSTNDGLAIAYSIVEYILK-HIKARSLFATH 727
Query: 667 LTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
EL +N F +S ++ E ++++FL + +L SYG++ A +
Sbjct: 728 FHELSAINHDS--------FVNLS-MKIEQQG---DELIFLREVEEKPSLNSYGIYVAQI 775
Query: 725 AGVPAEVIKRAAYVLEAAQNNKH 747
AG+P EV+KRA +L++ + +H
Sbjct: 776 AGIPLEVVKRANIILKSLTSREH 798
>gi|387791391|ref|YP_006256456.1| DNA mismatch repair protein MutS [Solitalea canadensis DSM 3403]
gi|379654224|gb|AFD07280.1| DNA mismatch repair protein MutS [Solitalea canadensis DSM 3403]
Length = 874
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 291/593 (49%), Gaps = 72/593 (12%)
Query: 206 VFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKD 265
+ ++++ TPMG RLLR W + P+ + + RL+ + F +EL + + LK + D
Sbjct: 290 LISILDQTATPMGARLLRKWMVMPLKEKVLIVERLSVVQHFFEQQELASDIQAKLKPIGD 349
Query: 266 IPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVE 323
+ ++ K + +++ ++ + + E ESL++ LN I E
Sbjct: 350 LERLISKVALQK--ANPRELVQLGRALAAIAEIKSVTENTKQESLQKIADQLNPCKLIRE 407
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
K + + E + + G ++ +G C+ELD+LR+I ++L ++
Sbjct: 408 KIENQLNPEPPVLVQ---------------KGGVIADGICEELDQLRKIAFSGKDYLLDM 452
Query: 384 ASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE 441
E +P L I + + GY + + D E ++ ++
Sbjct: 453 QRRESDATGIPSLK-------IAFNNVFGYYLEVTNAHKDKVPEEWIRKQTLVNAER--- 502
Query: 442 TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCF 501
Y TP+ +E + + KI +E + DL+ + + + A+LD
Sbjct: 503 -----YITPELKEYEEKILGAEEKIFALENKLYNDLLMGMLEYIRPIQLNALLVAQLDVQ 557
Query: 502 LSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INII 557
LS A VA +N+Y +P + + ++DI+ GRH + E ++ + +IPND +D++ + I +I
Sbjct: 558 LSFAQVAVKNHYSKPEIVDDNVIDIKAGRHPVIEKSLPLGEEYIPNDVFLDDETQQIIMI 617
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS ++Q ALIV ++ +GSFVPA AA +G+TD S ++++ +S+FM+
Sbjct: 618 TGPNMAGKSALLRQTALIVLMAQVGSFVPAKAARLGITDKIFTRVGASDNLSSGESTFMV 677
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD--VPPKVLVCTH- 666
++++ +L +++SL LLDE G+GT T DGI + +I ++ D K L TH
Sbjct: 678 EMNETASILNNLSNRSLVLLDEIGRGTSTYDGISI-AWSIAEYIHNDPKSKAKTLFATHY 736
Query: 667 --LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
L E+ NE ER+K + +S+ +N ++FL +LV G + S+G+H A +
Sbjct: 737 HELNEMENE-----FERIKNFNVSIKEVDNK------VIFLRKLVAGGSEHSFGIHVARM 785
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLK 777
AG+P +V+K+A VL + + E S KN V+K+ D ++
Sbjct: 786 AGMPPKVVKKAEEVLRKLEEERSSE-------SGTGAAIKNGVKKLKKSDQMQ 831
>gi|387132511|ref|YP_006298483.1| DNA mismatch repair protein MutS [Prevotella intermedia 17]
gi|386375359|gb|AFJ08283.1| DNA mismatch repair protein MutS [Prevotella intermedia 17]
Length = 924
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 163/601 (27%), Positives = 285/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + K+++LD +L++ + ++G S+ ++++ +TPMG R
Sbjct: 303 ITSLARIEEEKYVRLDRFTIRSLELVAPMQ----------EDGSSLLNVVDRTITPMGGR 352
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L W + P+ D++ +N RL+ + ++ + L++ L + D+ I+ K SP
Sbjct: 353 MLHRWLVFPLKDVKPINERLDIVEYYFREPDFRQCLNDQLHRMGDLERIISKVAAGRVSP 412
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K+ C + + VG +L E +R D +E+ L
Sbjct: 413 REVVQLKIALRAIQPMKTACLYANNEALKRVGEQLNLCESIR----DRIEQEIKPDPPHL 468
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ GF ELDELR I + + L ++ E Q
Sbjct: 469 V------------------AKGDVIAHGFNAELDELRSIRDNGKQVLLDIQEKEAAQTG- 509
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I + + GY + + D + ++ A ++ Y TP+ +
Sbjct: 510 ----ISSLKIGFNNVFGYYLEVRNTFKDKVPSDWIRKQTLAQAER--------YITPELK 557
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + N A LDC L+ A +A +N Y
Sbjct: 558 EYEAKILGADEKILALEARLFNELVQDMQEFIPQIQINANLVARLDCLLAFANIAEENKY 617
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +IPND +DN+ +I +ITGPN +GKS +
Sbjct: 618 VRPVVDDSMVIDIKKGRHPVIETQLPLGEPYIPNDVYLDNEQQQIMMITGPNMAGKSALL 677
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IG FVPA+ A +GL D S +++ +S+FM+++ + +L
Sbjct: 678 RQTALIVLLAQIGCFVPAEGARIGLVDKVFTRVGASDNISLGESTFMVEMTEASNILNNV 737
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKS- 679
T +SL L DE G+GT T DGI + + Y + L TH E LNE + K+
Sbjct: 738 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRAAARTLFATHYHE-LNE--MAKNF 794
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K + +SV + I+F+ +L G + S+G+H A +AG+P ++KRA VL
Sbjct: 795 RRIKNFNVSVKEVDGK------IIFVRKLERGGSEHSFGIHVADIAGMPKSIVKRANVVL 848
Query: 740 E 740
+
Sbjct: 849 K 849
>gi|269797932|ref|YP_003311832.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
gi|269094561|gb|ACZ24552.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
Length = 877
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 292/599 (48%), Gaps = 58/599 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A++ + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDVNQIQRRQAAVAELITRGAERSHIQSFLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ D TA +S+ L + + S +L +N I + +Y+L+
Sbjct: 363 SPRDLTALRESLAVLPDIKNVLSTCSSLALTS----INERIHDHKD---------IYDLL 409
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 410 CRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSEQWLAKMEA-DIKEATGLSK---- 464
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + K EQ+ + F +R Y TP+ +E + +
Sbjct: 465 IKTGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEIKIL 516
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
KI+ +E + + L + I L + + A+LD SLALV ++ NY+ P + +
Sbjct: 517 SAKDKIIALEHELYQQLRNDIKLVIKAVQETARALADLDVLCSLALVGYEENYICPTIVM 576
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVF 577
++I++GRH + E + + F+PND +++D +ITGPN +GKS Y++Q A+++
Sbjct: 577 NGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDEEEFLLITGPNMAGKSTYMRQAAILMI 636
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL +L
Sbjct: 637 MAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSLIIL 696
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMS 688
DE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK YT++
Sbjct: 697 DEIGRGTSTFDGLSIAQAVVEH-ICKHIHSKTLFATHYHELI---CLEESYSKLKNYTVA 752
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
V +D+ FL R++ G A SYG+H A LAG+P V+KRA +LE+ ++ H
Sbjct: 753 V------KEKGKDVAFLRRIIKGGADRSYGIHVARLAGLPNSVLKRAEVILESLEDQSH 805
>gi|302412313|ref|XP_003003989.1| DNA mismatch repair protein mutS [Verticillium albo-atrum VaMs.102]
gi|261356565|gb|EEY18993.1| DNA mismatch repair protein mutS [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 198/391 (50%), Gaps = 49/391 (12%)
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
E V ID S+ T VR G +ELD L++ Y + + L +V S +LP +
Sbjct: 6 EAVGSTIDFRDSRPNSRVT-VRWGVNEELDRLKRDYNGMEDLLSQVVSDLSNELPEWARN 64
Query: 398 MFVPCIVYIHQIGYLMCI-----FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
+ CI + Q+G+L + EE + D ++ FS ++ +Y +
Sbjct: 65 IVTSCIFW-PQLGFLTMVPLYPDTEEPMYDGQGLDCDNWQIMFS----AERKAYYKNRRM 119
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
RELD LGDI D+E I +L + + D LL A + ELD +++ L A +
Sbjct: 120 RELDAHLGDIK----DLEVEILHNLAVDVMVHEDALLAAADICGELDALVAMTLAAGKYG 175
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND--------------------- 551
+ P LT+ +L I+ GRH LQE+ + +IPND +
Sbjct: 176 WTAPKLTMSNVLSIRAGRHPLQELVLPLYIPNDCYLSGGEDYETPGLGHESRSSGHSPMS 235
Query: 552 ----GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KH 599
+ ++TGPN+SGKS+Y+KQVALI +L+H+GS+VPA+ A VGLTD +
Sbjct: 236 TSTCASMTVLTGPNHSGKSVYLKQVALITYLAHVGSYVPAEEAIVGLTDKILTRLSTRET 295
Query: 600 MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-P 658
++ +SSF +DL QV L+ A+ +SL L+DEFGKGT ++DG GL+ +N+FV+
Sbjct: 296 VSRNESSFAVDLKQVAFCLKSASRRSLVLVDEFGKGTTSDDGAGLMAALVNHFVSLRTKK 355
Query: 659 PKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
P+VL TH E+ + KS L M +
Sbjct: 356 PRVLAATHFHEIFEGRYVSKSPYLTLAHMDI 386
>gi|282850161|ref|ZP_06259540.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
gi|282579654|gb|EFB85058.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
Length = 877
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 291/602 (48%), Gaps = 64/602 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ L LD ++ L+I + G ++ ++++ +TPMG R
Sbjct: 253 INYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKG--------TLLDVLDRTLTPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ D+ + R A+S + + + L + D I+ + + S
Sbjct: 305 LLKQWLESPLTDINQIQRRQAAVSELITRGAERSHIRNFLDCIYDFERIVGRVETGSV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---AYVY 337
+ D TA +S+ L + + G SL A + I + +Y
Sbjct: 363 SPRDLTALRESLAVLPDIKNVL--GTCSSL--------------ALTSINERMQDHKDIY 406
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
+L+ I + G ++++GF +LDELR + ++L ++ + ++ + L K
Sbjct: 407 DLLCRAIAEQPALTLKDGRVIKDGFNADLDELRSLATNSEQWLAKMEA-DIKEATGLSK- 464
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
Y GY + K EQ+ + F +R Y TP+ +E +
Sbjct: 465 ---IKTGYNKVFGYYFEVSHSKS-----EQVPDY-FIRKQTLANAER--YITPELKEFEI 513
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ KI+ +E + + L + I L + + A+LD SLALV ++ NY+ P
Sbjct: 514 KILSAKDKIIALEHELYQQLRNDIKLVIKDVQETARALADLDVLCSLALVGYEENYICPT 573
Query: 518 LTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVAL 574
+ + ++I++GRH + E + + F+PND ++ +D +ITGPN +GKS Y++Q A+
Sbjct: 574 IVMNGQINIRDGRHPVIEKFLKREVFVPNDIVLNHDDEEFLLITGPNMAGKSTYMRQAAI 633
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ ++ IGSF+PA A++ D S ++ QS+FM+++ +V +L AT SL
Sbjct: 634 LMIMAQIGSFIPAREASISPVDRIFTRVGASDDISTGQSTFMVEMKEVAYILENATHNSL 693
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFY 685
+LDE G+GT T DG+ + + + + + K L TH EL+ CL +S +LK Y
Sbjct: 694 IILDEIGRGTSTFDGLSIAQAVVEH-ICKHIHSKTLFATHYHELI---CLEESYSKLKNY 749
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T++V +D+ FL R++ G A SYG+H A L G+P V+KRA +LE+ ++
Sbjct: 750 TVAV------KEKGKDVAFLRRIIKGGADRSYGIHVARLVGLPNSVLKRAEVILESLEDQ 803
Query: 746 KH 747
H
Sbjct: 804 SH 805
>gi|448655183|ref|ZP_21682035.1| DNA mismatch repair protein MutS [Haloarcula californiae ATCC
33799]
gi|445765632|gb|EMA16770.1| DNA mismatch repair protein MutS [Haloarcula californiae ATCC
33799]
Length = 921
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 218/782 (27%), Positives = 352/782 (45%), Gaps = 96/782 (12%)
Query: 4 YMACILH------GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
Y+A ++ G G++ D + Q V ++ +D+++ L ++ + +
Sbjct: 118 YLAAVVREASRDSGDTYGIAATDVTTGQFQVTQL-DDADAGEALTELYTFGPAEILPGPE 176
Query: 58 TKSEESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++++ FL L+ R+D + L S+ F +A H +++E+
Sbjct: 177 LRNDDEFLDRLRERTDAA-----LTLHDSASFEPGRASH--------------TVREQFG 217
Query: 117 --YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
++S+ V VRA+G +L+ +E+ I TL A++T + +
Sbjct: 218 SETVDSVGIGDQNVAVRAAGAVLSYVEDTGI-GTL-------AAVT--RLQAYGERDHVD 267
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDAT L++ +T + S S+F ++ VT G RLL+ W RP +
Sbjct: 268 LDATTQRNLELTETMQGDSS---------GSLFDTIDHTVTAAGGRLLQQWLQRPRRNRA 318
Query: 235 NLNSRLNAISFFLCSEELMAS--LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
L R + ++ SE MA + ETL D+ + + S S A D A +++
Sbjct: 319 ELQRRQSCVAAL--SEAAMARERIRETLSDAYDLERLAARATSGS--ADARDLRAVQETL 374
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEK-AASCITTELAYVYELVIGIIDVNRSKE 351
L V V +E L E D ++ AA + EL LV R
Sbjct: 375 ALLGRVADA--VTETERLAESPLADALDGADREAADSLAAELDSA--LVADPPGTVRQ-- 428
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQI 409
G L + G D+LD++ +E E+LE + E + HL + YI Q+
Sbjct: 429 ---GGLFKRGHDDDLDKIIDEHEAALEWLETLPDREKERTGITHLSVDRNKTDGYYI-QV 484
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
G D ++ Q + + +KR Y TP+ E + + + + DM
Sbjct: 485 GKSET-------DAVPDKYQHIKTLKN-----SKR--YTTPELDEKERDVLRLEERRHDM 530
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E ++L + + L AELD F SLA+ A +N++ RP + L I+ G
Sbjct: 531 EYERFQELRERVAQRATLLQDVGRTLAELDAFASLAVHAVENDWTRPAVVDGNELSIEAG 590
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E T + F+PND +D+D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +
Sbjct: 591 RHPVVEQTTE-FVPNDLYMDDDRQFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARS 649
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
ATVGL D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DG
Sbjct: 650 ATVGLVDGIFTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVGRGTATFDG 709
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG-CLPKSERLKFYTMSVLRPENNSTDVE 700
I + Y V + K L TH EL G LP E + P + +D
Sbjct: 710 ISIAWAATEYIVNS-IQSKTLFATHYHELTALGEELPTVENVHVAVDG--EPRSAGSDG- 765
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE-RWSHENISAQ 759
D+ FL + G SYG+H A LAGVP V+ R+ VL+ +++K +E R S +N
Sbjct: 766 DVTFLRTVRDGPTDRSYGVHVADLAGVPEPVVDRSQAVLDRLRDDKAIEIRGSEQNDGGT 825
Query: 760 DQ 761
Q
Sbjct: 826 TQ 827
>gi|239623741|ref|ZP_04666772.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521772|gb|EEQ61638.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 888
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 180/645 (27%), Positives = 303/645 (46%), Gaps = 76/645 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ S +F+ +D + L++ +T + G ++ +++K T MG R
Sbjct: 256 ITTITPYSTGQFMVIDTSTRRNLELVETMREKQKRG--------TLLWVLDKTKTAMGAR 307
Query: 221 LLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR + +P++ E + R A+ ++ EE+ L+ + I I K +P
Sbjct: 308 LLRTYIEQPLIHKEEIVKRQTAVEELNMNYISREEICEYLNPIYDLERLIGRISYKTANP 367
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
D AF S+ L H+ +I + E E LR L ++ L +
Sbjct: 368 R------DLIAFKNSLEMLPHIKQI----LGEFSGELLRGLAQEM---------DPLQDI 408
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
Y L+ I + G ++++G+ +E D LRQ E ++L E+ + E +
Sbjct: 409 YGLIDQAILEDPPVTVREGGIIKDGYHEEADRLRQAKTEGKDWLAELEAREKEKTGIKTL 468
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
K F Y ++ F++++ D F T + T + + L
Sbjct: 469 KIKFNKVFGYYFEV---TNSFKDQVPD-----------YFVRKQTLTNAERFTTDELKHL 514
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++++ K++ +E + + I + K A +D F SL++VA + NY++
Sbjct: 515 EDIIMGAEEKLVSLEYDLFCQVRDSIAAQVVRIQKTAKAIAGVDVFCSLSVVATRRNYVK 574
Query: 516 PILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQV 572
P++ + ++ I+NGRH V Q M D F+ NDT +DN R+++ITGPN +GKS Y++QV
Sbjct: 575 PMMNEKGVIQIKNGRHPVVEQMMRDDLFVANDTFLDNGKNRLSVITGPNMAGKSTYMRQV 634
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ +GSFVPA A +G+ D S + + QS+FM+++ +V +LR AT
Sbjct: 635 ALIVLMAQLGSFVPAQEADIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRN 694
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERL 682
SL +LDE G+GT T DG+ + I + + + K L TH EL EG + +
Sbjct: 695 SLLVLDEIGRGTSTFDGLSIAWAVIEHISSTKLLGAKTLFATHYHELTELEGTIAG---V 751
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA + E
Sbjct: 752 KNYCIAV------KEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIARAKEIAEEL 805
Query: 743 QNNKHVERWSH-ENISAQDQQYKNA-------VEKMLAFDVLKGD 779
+ R IS+ Q+K ++++ FD +K D
Sbjct: 806 SDADITARAKEIAEISSNITQHKAVPKPDEVDMQQLTFFDTVKDD 850
>gi|260591976|ref|ZP_05857434.1| DNA mismatch repair protein MutS [Prevotella veroralis F0319]
gi|260536260|gb|EEX18877.1| DNA mismatch repair protein MutS [Prevotella veroralis F0319]
Length = 886
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 286/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + G G S+ +++ +TPMG R
Sbjct: 268 ITSLTRIEEDKYVRMDRFTVRSLELVA----PMNEG------GSSLLNVIDNTITPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D+ +N RL+ + F + + ++ E + D+ I+ K SP
Sbjct: 318 MLRRWVVFPLNDVAVINERLDIVDHFFRASDFRNNIDEQFHQMGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ + L + K E +E L + LN I E+ C A +
Sbjct: 378 -------------REVVQLKNALKAIEPVKAECLSTNNKSLN-RIGEQLNLC-----ANL 418
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
+ + I+V+ + G ++ G+ ELD+LR I + ++L E+ E+ Q
Sbjct: 419 RDRIEKEINVDPPQLVAKGDVIASGYDKELDDLRSIRDNGKQYLLEIQEKEIAQTGISSL 478
Query: 396 KEMFVPCIVYIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
K F Y ++ + + E+ + TL Q + Y TP+ +
Sbjct: 479 KVGFNNVFGYYLEVRNTFKNKVPEDWIRKQTLAQAER----------------YITPELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL E + +L+ + F + N A LDC LS +A Q +Y
Sbjct: 523 EYEEKILGADEKILAREGQLFMELIQDMQPFIPQIQVNANLVAHLDCLLSFMKIALQQHY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
+RP + +LDI GRH + E + + ++PND ++D + +I +ITGPN +GKS +
Sbjct: 583 VRPTVDDSDVLDIHQGRHPVIETQLPIGEQYVPNDVKLDTEHQQIMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQIGCFVPAERARIGIVDKIFTRVGASDNISLGESTFMVEMTEAANILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
T +SL L DE G+GT T DGI + + Y + L TH E LNE + KS
Sbjct: 703 TPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKAQARTLFATHYHE-LNE--MEKSF 759
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV + I+FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 760 SRIKNYNVSVKEVDGK------IIFLRKLTRGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 E 740
+
Sbjct: 814 K 814
>gi|345517023|ref|ZP_08796503.1| DNA mismatch repair protein mutS [Bacteroides sp. 4_3_47FAA]
gi|254833801|gb|EET14110.1| DNA mismatch repair protein mutS [Bacteroides sp. 4_3_47FAA]
Length = 883
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 266 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 314
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 315 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 374
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 375 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 430
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 431 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 476 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 520
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + + A LDC L+ A VA +NNY
Sbjct: 521 EYEEKILGAEDKILVLETKLYNELVVALAEFIPAIQINASQIARLDCLLAFANVAKENNY 580
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS +
Sbjct: 581 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 640
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 641 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 700
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 701 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 757
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 758 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 811
>gi|150003763|ref|YP_001298507.1| DNA mismatch repair protein MutS [Bacteroides vulgatus ATCC 8482]
gi|319640015|ref|ZP_07994742.1| DNA mismatch repair protein mutS [Bacteroides sp. 3_1_40A]
gi|423313096|ref|ZP_17291032.1| DNA mismatch repair protein mutS [Bacteroides vulgatus CL09T03C04]
gi|189030698|sp|A6KZM1.1|MUTS_BACV8 RecName: Full=DNA mismatch repair protein MutS
gi|149932187|gb|ABR38885.1| putative DNA mismatch repair protein MutS [Bacteroides vulgatus
ATCC 8482]
gi|317388293|gb|EFV69145.1| DNA mismatch repair protein mutS [Bacteroides sp. 3_1_40A]
gi|392686310|gb|EIY79616.1| DNA mismatch repair protein mutS [Bacteroides vulgatus CL09T03C04]
Length = 870
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 253 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 301
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 302 RLLKRWVVFPLKDEKPVNERLDVVEYFFREPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 361
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL L I EK A + +
Sbjct: 362 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNLC-LSIREKIAKEVKNDPPL 417
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 418 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 462
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 463 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 507
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + + A LDC L+ A VA +NNY
Sbjct: 508 EYEEKILGAEDKILVLETKLYNELVVALAEFIPAIQINASQIARLDCLLAFANVAKENNY 567
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS +
Sbjct: 568 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 627
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 628 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 687
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 688 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 744
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 745 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 798
>gi|414155132|ref|ZP_11411447.1| DNA mismatch repair protein mutS [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453182|emb|CCO09351.1| DNA mismatch repair protein mutS [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 870
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 171/616 (27%), Positives = 294/616 (47%), Gaps = 81/616 (13%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S ++ LD A L+I ++ + G ++ G+++K T MG RLL++W
Sbjct: 262 SPRAYMMLDGIARRNLEITKSLRDGGTKG--------TLLGVLDKTRTAMGGRLLKSWLE 313
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DW 285
+P+++L ++ +RL+A+ + + L L LK + D L++ + + TA+ D
Sbjct: 314 QPLINLSDIQARLDAVEELVHALLLREELAGALKQIYD----LERLTARAAYGTANGRDL 369
Query: 286 TAFLKSI---CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
TA L S+ SL + + S+ Q L+ +AS A + +
Sbjct: 370 TALLGSLEKLPSLYQALQQSRSSLLRSISRQFDTLDDLRDLLSASLADNPPASLRD---- 425
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFV 400
G L+++G+ E+D LR + +L E E + +L
Sbjct: 426 ------------GGLIKDGYHPEVDRLRAAARDGKAWLAGLEAREKEKTGIKNLK----- 468
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
+ + GY + + T L + Y TP+ +E ++++
Sbjct: 469 --VGFNKVFGYYL--------EVTKANLHAVPDYYQRRQTLANAERYITPELKEYESMIL 518
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+++++E + ++ + + K A++D +SLA VA Y++P L+
Sbjct: 519 GAADRLVELEYDLFTEIRGRVADQVQRIQKTAALIAQIDVLVSLAEVATARGYVKPRLSD 578
Query: 521 EPLLDIQNGRHVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
E +++I GRH + EMT+ F+PNDT +D + R+ +ITGPN GKS Y +QVALIV
Sbjct: 579 EGVIEITEGRHPVVEMTLGPGRFVPNDTCLDTANRRLCLITGPNMGGKSTYQRQVALIVL 638
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ +GSFVPA A +G+ D S +++ QS+FM+++ + +L AT++SL ++
Sbjct: 639 LAQVGSFVPASMAKIGIVDRIFARVGASDDLSSGQSTFMVEMFETRQILDNATARSLVII 698
Query: 630 DEFGKGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
DE G+GT +G+ + I Y V C + L TH EL EG LP LK Y
Sbjct: 699 DELGRGTSNLEGMAIAQAVIEYLHDVVGC----RTLFSTHYHELAELEGLLPG---LKNY 751
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+V + +VFL ++V A SYG+HCA LAG+P VI+RAA E Q
Sbjct: 752 ATAV------QEQGDQVVFLRKVVRDKASKSYGVHCARLAGLPGHVIERAA---ELVQQL 802
Query: 746 KHVERWSHENISAQDQ 761
++ +R + E ++ ++Q
Sbjct: 803 EYRQRAAQEVVAGKNQ 818
>gi|367011629|ref|XP_003680315.1| hypothetical protein TDEL_0C02150 [Torulaspora delbrueckii]
gi|359747974|emb|CCE91104.1| hypothetical protein TDEL_0C02150 [Torulaspora delbrueckii]
Length = 878
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 183/636 (28%), Positives = 290/636 (45%), Gaps = 72/636 (11%)
Query: 154 SGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKC 213
S + S I + + L L +D +L IF P++ + R SVF + +
Sbjct: 197 SSSRSNMISHIESLQLKDRLFMDRDTLYSLNIFPESHRPNNEKVLRGG-SLSVFELFQQY 255
Query: 214 VTPMGRRLLRNWFLRPILDLENLNSRLNAISFF--LCSEELMASLHETLKYVKDIPHILK 271
++ MGRRLLR W P+ + + R + I+ + + +L T+K DI I+
Sbjct: 256 LSEMGRRLLRQWMFNPLSEYRLIKERHDIITILNDKTNSVIFENLRSTMKGFPDIFKIMD 315
Query: 272 KFNSPSFIY-TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCIT 330
+F + Y T T FLK H+ F +S + L D V A
Sbjct: 316 QFRTGKSTYNTWHSLTVFLKKGIESYHLISTFRF---DSETDNLFSKLGDRVNPLA---- 368
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA-SLELV 389
L + + V IID+ SKE ++ +G + LD+ +++Y L L +VA + E V
Sbjct: 369 --LQGLIDQVENIIDIETSKETKL-VVINDGIDENLDKYKKLYNNLENILSDVARNAERV 425
Query: 390 QLPHLCKEMFVPC---------IVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSD 437
+ + ++ V VYI Q+GYL+ + EE L D G+E F
Sbjct: 426 LVQLIERQRGVSAQIEIKDYVNAVYIPQLGYLVTLDVLIEEVLPDVNP---AGWEEIFR- 481
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
T +++ LD +GD++ I D+E + HI L + E
Sbjct: 482 ---TTTNIYFKNNSVLNLDEQVGDVFGIISDLEIEFLQAFQEHILEQRHVLTEYQKLLLE 538
Query: 498 LDCFLSLALVAHQNNYMRP-ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND----- 551
++ LS A V+ +Y+ P I E +L+I GRH + E V+++IPND ++
Sbjct: 539 VEVLLSFAYVSQIRSYVEPEISETECVLEITQGRHPIYETLVESYIPNDINLNGGYFSEK 598
Query: 552 --------------GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS 597
RI I+TG N SGK++++ Q ALIVFL+HIG FVPA+ A +GL D
Sbjct: 599 GQDYSNNVWSQKEFNRIAIVTGANQSGKTVFLTQNALIVFLAHIGCFVPAEKAKIGLVDK 658
Query: 598 --------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ ++ QSSF +D Q+ L T +SL LDEFGKGT DG + G I
Sbjct: 659 ILTRIKTRESVSKNQSSFALDSQQMAKCLSLMTERSLLFLDEFGKGTDVIDGPAIFGSII 718
Query: 650 NYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVL-------RPENNSTDVED 701
+ P+VL CTH EL + L S +K Y ++ P + + E+
Sbjct: 719 KFLAEPRSCPRVLACTHFHELFKKDVLTTSIPGVKHYATEIILDTSRLYSPFDFTKHEEN 778
Query: 702 --IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
I FL+++ G + S+G++CA + G+ ++++RA
Sbjct: 779 QGITFLFKIKEGISSQSFGVYCAKICGLNPKIVERA 814
>gi|444335455|ref|YP_007391824.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
gi|444299834|gb|AGD98071.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
Length = 836
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 196/788 (24%), Positives = 362/788 (45%), Gaps = 115/788 (14%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
+G+S+ D S + ++E +++ L+ +K+ +II+ + E+ + L ++
Sbjct: 145 LGLSFLDISTGEFFIVEDTKEN-----LLHYLKHFNPSEIIFQ--RKEKKYFDELFKNKY 197
Query: 74 TTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRAS 133
T L++ +F+Y A+ +LI T G I++ + +G + AS
Sbjct: 198 YTF-----LMEDWMFNYPFAYEKLISHFQTNSLKGFGIED--------LKLG----IIAS 240
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G +L+ L DT K I ++ + + + +D + L+IF
Sbjct: 241 GIILSYL-----YDTQHYKIKH-----ISNIKRIKKEEHMWIDDFTFQNLEIFH------ 284
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
G K+G S+ ++++ +TPMG RLL++W P++++ ++ R + + +
Sbjct: 285 ----GLNKQGVSLIDIIDQTLTPMGSRLLKHWIYFPLINVPSIQRRHQIVEELFSNISIR 340
Query: 254 ASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
+ + LK + DI ++ K SP I T KS+ ++ + KI
Sbjct: 341 DFIQKKLKEISDIERMISKMAIGRISPREIITLH------KSLTAIYEIKKIL------- 387
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L ++ ++L ++ +C + + + I + G ++ +GF ELD++
Sbjct: 388 LSQKSKIL-LELGNSFQNC-----HIISKKITETIHPDPPNHIEKGNVIVKGFSQELDKI 441
Query: 370 RQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQ 427
R +Y E+LE++ S+E +P+L I Y + GY + K
Sbjct: 442 RFLYFSKKEYLEKLRSIEQSNTGIPNLK-------IGYNNIFGYFFEVKNTKKHKVPSHW 494
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
++ S+ Y T K + + + + KI +E+ I +L++ + +
Sbjct: 495 IRKQTLTNSER--------YTTEKLKNYELQILNSEQKIFSLEKEIFHNLINKLLKYIKP 546
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPN 544
L + A+LD S ++ A +NNY++P + L I+ GRH + Q ++ ++IPN
Sbjct: 547 LQENAKIIAKLDVLCSFSISALENNYVKPKINHSFELCIKKGRHPVIERQFISKISYIPN 606
Query: 545 DTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D ++ D +I IITGPN SGKS ++Q A+I+ ++HIGSFVPA A +GL D
Sbjct: 607 DLFLNKTDQQIMIITGPNMSGKSAILRQTAIIILMAHIGSFVPAQYAKMGLVDKIFSRVG 666
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S +++ +S+FM+++++ +L + +S +LDE G+GT T DGI + + +
Sbjct: 667 ASDNISLGESTFMVEMNETANILNNLSKRSFIILDEIGRGTSTYDGISIAWSIVEFLHEN 726
Query: 656 DVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALL 715
P L TH EL K R+K Y +SV + E+I+F+ L+ G +
Sbjct: 727 SFRPLTLFATHYHELNKMSSFFK--RIKNYHISVKKIN------ENIIFMRTLIDGGSEH 778
Query: 716 SYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDV 775
S+G+H A ++G+P VI RA +L+ V Q+ + K AF +
Sbjct: 779 SFGIHVAKISGMPTRVIHRAKEILKTLDKKNQV-----------FQENPKILFKKKAFFI 827
Query: 776 LKGDLRLF 783
LK D LF
Sbjct: 828 LKKDYELF 835
>gi|448712106|ref|ZP_21701649.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
gi|445791191|gb|EMA41840.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
Length = 920
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 313/651 (48%), Gaps = 75/651 (11%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-----IDSVIEVSLNKFLKLDAT 178
+ S+ ++RA G LL E R ++ + E+ + + + + ++L LDA
Sbjct: 255 LASDPEIRACGALLEYAEYARGSESEAEAEADDERESDRLEYLTHLRRYDPREYLLLDAV 314
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
A +L++F+ P + +++ ++ G++++ + +G R LR+W RP+L+ + + +
Sbjct: 315 ALRSLELFE----PRAV---HSRDDATLVGVLDETASALGGRKLRDWLRRPLLEPDRIEA 367
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
RL+A+ S L E L+ V D+ ++ + + A D L+S+ L V
Sbjct: 368 RLDAVEELNGSVRAREKLQELLRDVYDLERLIGRISRER--ANARD----LRSLRDTLAV 421
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
+ ++ E+L L+ D+ LA V E++ I + E G ++
Sbjct: 422 VPDVRAQLEDADCERLEQLHADL---------DPLADVREVIDDAIVEDPPIEITEGGII 472
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
EG+ +LD+LR+ + ++++++A E + + + Y GY + +
Sbjct: 473 AEGYDGDLDDLRETARDGKQWIDDLAERERERTG-----IDSLKVGYNSVHGYYIEVTNP 527
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
LD + + S+ + TP+ +E ++ + + ++E + RD+
Sbjct: 528 NLDSVPEDYQRRQTLKNSER--------FVTPELKEREDEIVGAEERADELEYELFRDVR 579
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL----------TLEPLLDIQN 528
+ + + + A +D +SL+ VA Q +Y RP L LE +DI+
Sbjct: 580 KTVADEVERVQDLADALATVDALVSLSTVAAQYDYARPELLERDRERGERGLE--IDIEG 637
Query: 529 GRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
GRH + E T +F+PND R + R+ +ITGPN SGKS Y++QVA IV LS +GSFVPA
Sbjct: 638 GRHPVVERTQASFVPNDARFTDGQRLAVITGPNMSGKSTYMRQVAQIVLLSQVGSFVPAK 697
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A + D S + +S+FM+++ ++ +LR+A +SL LLDE G+GT T D
Sbjct: 698 SARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREADERSLVLLDEVGRGTSTAD 757
Query: 641 GIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNST 697
G+ + I + +V L TH LTE+ + L + L F E +
Sbjct: 758 GLA-IAQAITEHLHDEVGATTLFATHHHPLTEVTEQ--LADAFTLHF--------EVDQA 806
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
D E +VF + + PG A SYG+ A AGVP V++R+ ++ A+++ H
Sbjct: 807 DGE-VVFRHEVAPGAATGSYGVEVATAAGVPEPVVERSRELVAEAEDSPHA 856
>gi|388456103|ref|ZP_10138398.1| DNA mismatch repair protein MutS [Fluoribacter dumoffii Tex-KL]
Length = 848
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 291/640 (45%), Gaps = 100/640 (15%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
A+G LLA L+ T +Q ++T++ +L+LDA+ + L++F+
Sbjct: 231 AAGALLAYLQT-----TQKQTLPHLTTLTVEKS-----QDYLQLDASTQKHLELFE---- 276
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
+M G S+ +++K + MG RLLR W RP+ + SR NAI + ++
Sbjct: 277 --NMSGGHEN---SLLSLLDKTASSMGSRLLRRWLGRPLKQHNQIKSRQNAIKEIMHLQQ 331
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISE--- 308
+L+E L+ V D+ I + S D A ++ L +N + SE
Sbjct: 332 -GVTLYELLRQVCDVERIASRIALKS--ARPRDLVALNHTLALLPELNSVLAYNRSELTI 388
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L+E ++ L + +L+ I N G ++ GF +ELDE
Sbjct: 389 QLKENIK----------------PLPVLQQLLSSAIIENPPVLIRDGGVIASGFDEELDE 432
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQL 428
LR L A+ +L+QL K+ + G F +
Sbjct: 433 LR--------ILSTRANDKLLQLELEEKQ----------RTGLSTLKF-------GFNNV 467
Query: 429 QGFEFAFSDMDGETKRLFYH------------TPKTRELDNLLGDIYHKILDMERAITRD 476
QG+ S E YH TP+ ++ + + K L E+ + +
Sbjct: 468 QGYYIELSKSQAEKAPPHYHRKQTLKNVERYITPELKQFEEKVLSAQVKALAREKWLYEN 527
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQE 535
L+ I + + L A+LD ++LA A N+ P L E + I+ GRH V+++
Sbjct: 528 LLLEIQNYLNELTLLAQELAKLDVLVTLAERAQNFNWCCPALVPESQISIEAGRHPVIEQ 587
Query: 536 MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+ + FI ND + I +ITGPN GKS Y++Q ALIV L+H+GSFVPA + T+G
Sbjct: 588 LLQERFIANDLHLKPSQNILLITGPNMGGKSTYMRQTALIVLLAHMGSFVPAKSVTLGPI 647
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S + + +S+FM+++ + +LRQAT++SL L+DE G+GT T DG+ L
Sbjct: 648 DRIFTRIGASDDLASGRSTFMVEMTETAQILRQATNESLVLIDEIGRGTSTYDGMALAYA 707
Query: 648 TINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPEN--NSTDVEDIVFL 705
+ Y T + L TH EL + LP+ +R + S D I+FL
Sbjct: 708 SCTYLATT-IKAYTLFSTHYFELTH---LPQQ-------WPCIRNVHLQASLDTGRIIFL 756
Query: 706 YRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
YR+ PG A SYGL A LAG+PAEV+K A L+ QN
Sbjct: 757 YRVEPGPANRSYGLEVAELAGIPAEVLKIAHTQLKQIQNQ 796
>gi|206900896|ref|YP_002250799.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
gi|206739999|gb|ACI19057.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
Length = 853
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 297/595 (49%), Gaps = 63/595 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++L LD+TA + L++ +T + G S+ +++K +T MG RLL+ W L+P
Sbjct: 259 QQYLILDSTAIKHLELLETVREGQRRG--------SLIWVLDKTLTSMGARLLKKWILQP 310
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+L++ + R AI FL E + + LK + D+ I + N + T +
Sbjct: 311 LLNVNAIKKRQGAIKEFLEKEPWRREIEDILKEMPDLERINSRINYNTA--TPKELIYLR 368
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE-LVIGIIDVNR 348
+++ L + K E S+ L+E L +L +YE L +++
Sbjct: 369 QALSFLPLLRKSLEKAESDRLKELKENL-------------PDLEPLYEELDRALVESPP 415
Query: 349 S--KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
S K+ GY +++G+ LDELR++ E ++L + + E + K + I Y
Sbjct: 416 SHIKDGGY---IKDGYDPNLDELRRLLRESKDWLINLENRERERTG--IKSL---KIGYN 467
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + L+ + ++ ++ + TP+ +E +N + I
Sbjct: 468 QVFGYYIEVTKANLNLVPPDYIRKQTLVNAER--------FITPELKEWENKILHAEDNI 519
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+E + ++L + S + E+D ++SLA A + NY+ P +T + + I
Sbjct: 520 KKIEEELFQNLRKKVIEHSRDITTFAQIIGEIDVYISLAKAAREYNYVCPQVTNDYDVII 579
Query: 527 QNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+ GRH + E + TF+PND ++ + I++ITGPN +GKS YI+Q+ALI+ L+ +GSF
Sbjct: 580 REGRHPVIERMLPPGTFVPNDAYLNREKFIDLITGPNMAGKSTYIRQIALIIILAQMGSF 639
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
+PA A +G+ D +++ +S+F++++ +VG +L AT +SL +LDE G+GT
Sbjct: 640 IPAKEAKIGVVDRIFTRIGAWDDISSGESTFLVEMKEVGNILSHATERSLIILDEVGRGT 699
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSER-LKFYTMSVLRPENN 695
T DGI + + Y + + K L TH EL L K R LK +++V
Sbjct: 700 STYDGISIAWAIVEY-IHNKIKAKTLFATHYHELTE---LEKELRHLKNLSVAV------ 749
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
++I+FL+++V A SYG++ A LA +P EVI+RA +L + + +++
Sbjct: 750 QEKGKEIIFLHKIVDKPADKSYGIYVAQLADLPREVIERAEKILLELEKGREIKK 804
>gi|325289888|ref|YP_004266069.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
gi|324965289|gb|ADY56068.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
Length = 853
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 181/704 (25%), Positives = 325/704 (46%), Gaps = 90/704 (12%)
Query: 58 TKSEESFLSALKRSDGT----TEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE 113
T S+++ L+ L R + + V + K+ Y A + I+ + G +E
Sbjct: 150 TPSQQTLLNELNRINPAEIILPKEFAVSMSKALDGYYSNAADKTIFSSLAGF------RE 203
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVS---LN 170
R +++ V RA+G L ++ + I D+ ++ +VIE+ +
Sbjct: 204 RFHNYTGLLEQ-MPVSARAAGALWNYIK-KNIPDS-----------SLQNVIELKSCRQS 250
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+ + LD + L++ ++ + G ++F ++N T G R+LR+W +P+
Sbjct: 251 EVMVLDRWTRKNLELVESSRFGDERG--------TIFDVLNLTKTAFGARMLRHWIQQPL 302
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWT 286
L+ E + +RL+ + + L + L +V D+ + + + SP + +
Sbjct: 303 LNKEQIEARLDTVEELTKNTFARQELFKCLSHVYDLERLTARLSYGKASPRDMLALAATL 362
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A L + ++H +++ + E + L+ D+ K I +
Sbjct: 363 ACLPEVRKIIHQHQVLTL---TKYLEPISGLD-DLSAKLLKAINPDAPVTLH-------- 410
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G ++ G+ E+D LR + +++ + + E + ++ I Y
Sbjct: 411 -------EGNIINNGYIPEIDRLRAVASGGRDWIARLENQEREK-----TKIKSLKIGYN 458
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + I L ++ +R Y TP+ +E + + + K+
Sbjct: 459 KVFGYYIEITNAN------SHLVPEDYIRKQTLANCER--YITPELKEYEQQVLNAQEKL 510
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
D+E A+ +L + + +L A E+D FLSLA A +++Y+RP + E + I
Sbjct: 511 FDLEYAVYTELKDEVLSHTPPILNAAQAIGEIDVFLSLAEAAVRHHYVRPEINNEGTIHI 570
Query: 527 QNGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH V++++ D F+PNDT + + + +ITGPN GKS Y++QVALIV LS +GSFV
Sbjct: 571 VEGRHPVVEQVCNDLFVPNDTLLTSSKSLALITGPNMGGKSTYMRQVALIVLLSQVGSFV 630
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A + L D S ++ + QS+FM+++++V +L+ A S+SL +LDE G+GT
Sbjct: 631 PAQKAAIALRDCIYTRVGASDNLASGQSTFMVEMNEVAFILQNAASRSLIILDEVGRGTA 690
Query: 638 TEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ L + Y P L TH EL E P + + V E
Sbjct: 691 TYDGLSLAWAIVEYLAGNPTAQPLTLFATHYHELTALETMFP-----AVFNLHVAVREKG 745
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
S DI+FL++++PG A SYGLH A +AG+P +++KRA +L
Sbjct: 746 S----DILFLHKILPGKADRSYGLHVAKIAGLPLDLLKRAESIL 785
>gi|401840858|gb|EJT43504.1| MSH5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 903
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 180/618 (29%), Positives = 285/618 (46%), Gaps = 70/618 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+ L + LD AL + H + + SVF + N+ + +R+L++W
Sbjct: 244 IDLKDRMVLDENTISALNVLPAAHKLGHDNMMK-NGSLSVFELFNRVSSDYAKRMLKSWL 302
Query: 227 LRPILDLENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNS-PSFIYTAS 283
P+ + + + R I L + L L +++K D + + +S S + T S
Sbjct: 303 FNPLTNKKQIEQRYCIIRILLDRQNSVLFDELTQSIKRCPDAFGFINQLSSGKSTLGTWS 362
Query: 284 DWTAFL-KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
FL K I VN + + +L ++ N DI + L ++
Sbjct: 363 KVVNFLEKGINIFKLVNSLKLSPDNGNLFHDIKR-NVDI---------SALKQCLRKIMA 412
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA----SLELVQLPHLCKEM 398
+ID + S++ T + G + LDE R +Y+ L L+EVA + L L M
Sbjct: 413 VIDFDTSRDTKTVT-INTGVDERLDECRNVYDHLEGILQEVAREAQTFLLSALSQTDCRM 471
Query: 399 -----FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET-----KRLFYH 448
+ VYI Q+GYL+ T L+ F +D++ E + +++
Sbjct: 472 TRNLDVLINAVYIPQLGYLI---------TVSALLEPFLANITDLEWEEIFRSPEDVYFK 522
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
K ELD GDIY I D E + L I L +EL+ S A ++
Sbjct: 523 NDKVLELDETYGDIYGVISDYEIEVLFSLQEQILEKKAELTSYSVLLSELEILQSFARIS 582
Query: 509 HQNNYMRP-ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRIN 555
+ +Y+ P ++ +LDI NGRH L E +D +IPN T ID + RI
Sbjct: 583 VERDYIEPQLMENNCVLDIINGRHALYETFLDDYIPNSTMIDGGSFSDLSWYNHDKQRIV 642
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSF 607
IITG N SGKS+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF
Sbjct: 643 IITGANASGKSVYLTQNGLIVYLAQIGCFVPAERAKIGIVDKILTRIRTQETIYKTQSSF 702
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
++D Q+ L AT +SL L+DE+GKGT DG L G + + P++L CTH
Sbjct: 703 LLDSQQMAKSLTLATEKSLILIDEYGKGTDILDGPSLFGSIMLNMSKSERCPRILACTHF 762
Query: 668 TELLNEGCLPKS-ERLKFYTMSVLRPENN---STDVED------IVFLYRLVPGHALLSY 717
EL NE L + +K Y +L +N+ +T ++D I FL+++ G + S+
Sbjct: 763 HELFNENILTEHIPGIKHYCTDILINQNHVSGATQIKDDHENEGITFLFKIKEGISRQSF 822
Query: 718 GLHCALLAGVPAEVIKRA 735
G++CA + G+ ++KRA
Sbjct: 823 GIYCAKICGLNKSIVKRA 840
>gi|343521470|ref|ZP_08758438.1| MutS domain V protein [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396676|gb|EGV09213.1| MutS domain V protein [Parvimonas sp. oral taxon 393 str. F0440]
Length = 561
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 267/545 (48%), Gaps = 60/545 (11%)
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG RLL W +P++++E + R + + + + L L E L + DI I K +
Sbjct: 1 MGFRLLNKWLDQPLIEIEKIQRRQSLVEDLVLNSNLRNELEELLASISDIERINSKISFG 60
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
+ A D S+ ++ + ++F L+ + + + + Y+
Sbjct: 61 N--CNARDLIHLKNSLSAVPKIKRLF--------------LDSNTLFSNIALNIPDTEYI 104
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELR--QIYEELPEFLEEVASLELVQLPHL 394
Y L+ I + G L++ G+ DELD +R +I + EV + + +L
Sbjct: 105 YNLINSAILEDVGILLKEGNLIKIGYDDELDLIRNNKIVGKQKLIKYEVDQRNITGIKNL 164
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+++ + GY + + + + L F R Y T +
Sbjct: 165 R-------LIFNKKTGYFFEVTK------SYQNLVPEYFELKQTLTNANR--YKTNELLT 209
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
++N++ I++ E + + + I + L K + + +D SL++VA +NNY
Sbjct: 210 IENMIFGSESDIIEKEYELFISIRNTIKMNIKTLQKLSDIISFIDSIFSLSIVAFKNNYC 269
Query: 515 RPILTLEPLLDIQNGRHVLQEM---TVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIK 570
+P L E ++DI+NGRH + E +++ FIPNDT I +D I IITGPN SGKS YI+
Sbjct: 270 KPTLNSEGIIDIKNGRHPVIESFLSSINEFIPNDTNIGQSDNLIQIITGPNMSGKSTYIR 329
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALIV L+ IGSFVPAD+A + + D S ++ +S+FM+++ +V +LR AT
Sbjct: 330 QIALIVILAQIGSFVPADSANISIVDKIFTRIGASDNLYKGESTFMVEMKEVNNILRYAT 389
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNE----GCLPK 678
SL +LDE G+GT T DG+ L + Y +T ++ K L TH EL++ C+
Sbjct: 390 KNSLLILDEVGRGTSTFDGLSLAWAILEY-ITKNIKSKTLFATHYHELIDLEHTFACIKN 448
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
+ V+ + N ++IVFL +++ G A SYG+ A LAG+P EVI R+ +
Sbjct: 449 KH------IQVIEDKEN----DEIVFLRKIMDGGANKSYGIAVAKLAGLPMEVINRSKII 498
Query: 739 LEAAQ 743
L++ +
Sbjct: 499 LDSIE 503
>gi|365959941|ref|YP_004941508.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
gi|365736622|gb|AEW85715.1| DNA mismatch repair protein MutS [Flavobacterium columnare ATCC
49512]
Length = 874
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 269/562 (47%), Gaps = 58/562 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ ++++ ++PMG RLL+ W P+ D+ + R + +F +++L+ + + +K +
Sbjct: 290 TLLDVIDRTLSPMGGRLLKRWLALPLKDINKIKGRHEVVGYFKDNQDLLCQVQQQIKQIS 349
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ ++ K + + +LK + E ++ L ++
Sbjct: 350 DLERLISKVAAGR---VSPRELVYLKDSLDAI---------------EPVKTLALKSTQE 391
Query: 325 AASCITTEL---AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
A I L + E + ++ + G + G +ELDELR I EFLE
Sbjct: 392 AVKVIGDSLHACELLREKISNTLNPDAPVAINKGNAIALGVNEELDELRNISSSGKEFLE 451
Query: 382 EVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+ E ++ +P I + + GY + + D E ++ ++
Sbjct: 452 AIEKRE-------SEKTGIPSLKISFNNVFGYYIEVRNTHKDKVPSEWIRKQTLVNAER- 503
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E ++ + KI +E ++ LV+ + + + N A+LD
Sbjct: 504 -------YITEELKEYESKILGAEEKIHQLEMSLFEQLVTWVATYIKPVQHNANLIAQLD 556
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIP---NDTRIDND-GRIN 555
C S A A +NNY+ P + +LDI+NGRH + E + +P ND +D D ++
Sbjct: 557 CLTSFAQQAIENNYVCPEINDTYVLDIKNGRHPVIEKQLPIGVPYIANDVYLDRDLQQVV 616
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN SGKS ++Q ALIV L+ +GSFVPA+A T+G+ D S +++ +S+F
Sbjct: 617 MITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAVTMGVVDKIFTRVGASDNISMGESTF 676
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++++ +L +++SL LLDE G+GT T DG+ + + PK L TH
Sbjct: 677 MVEMNETASILNNISNRSLVLLDEIGRGTSTYDGVSIAWAIAEFLHENPAQPKTLFATHY 736
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E LNE R++ Y +SV ++N ++F+ +L G + S+G+H A +AG+
Sbjct: 737 HE-LNE-MTETLTRIQNYNVSVKELKDN------VLFIRKLEKGGSAHSFGIHVAKMAGM 788
Query: 728 PAEVIKRAAYVLEAAQNNKHVE 749
P VI+RA +L+ + N E
Sbjct: 789 PQTVIQRAGKILKKLEKNHSSE 810
>gi|448638283|ref|ZP_21676256.1| DNA mismatch repair protein MutS [Haloarcula sinaiiensis ATCC
33800]
gi|445763532|gb|EMA14719.1| DNA mismatch repair protein MutS [Haloarcula sinaiiensis ATCC
33800]
Length = 921
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 218/782 (27%), Positives = 353/782 (45%), Gaps = 96/782 (12%)
Query: 4 YMACILH------GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
Y+A ++ G G++ D + Q V ++ +D+++ L ++ + +
Sbjct: 118 YLAAVVREASRDGGDTYGIAATDVTTGQFQVTQL-DDADAGEALTELYTFGPAEILPGPE 176
Query: 58 TKSEESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++++ FL L+ R+D + L S+ F +A H +++E+
Sbjct: 177 LRNDDEFLDRLRERTDAA-----LTLHDSASFEPGRASH--------------TVREQFG 217
Query: 117 --YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
++S+ V VRA+G +L+ +E+ V TL A++T + +
Sbjct: 218 SETVDSVGIGDQNVAVRAAGAVLSYVEDTG-VGTL-------AAVT--RLQAYGERDHVD 267
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDAT L++ +T + S S+F ++ VT G RLL+ W RP +
Sbjct: 268 LDATTQRNLELTETMQGDSS---------GSLFDTIDHTVTAAGGRLLQQWLQRPRRNRA 318
Query: 235 NLNSRLNAISFFLCSEELMAS--LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
L R + ++ SE MA + ETL D+ + + S S A D A +++
Sbjct: 319 ELQRRQSCVAAL--SEAAMARERIRETLSDAYDLERLAARATSGS--ADARDLRAVQETL 374
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEK-AASCITTELAYVYELVIGIIDVNRSKE 351
L V V +E L E D ++ AA + EL LV R
Sbjct: 375 ALLGQVADA--VTEAERLAESPLADALDGADREAADSLAAELDSA--LVADPPGTVRQ-- 428
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQI 409
G L + G D+LD++ +E E+LE + E + HL + YI Q+
Sbjct: 429 ---GGLFKRGHDDDLDKIIDEHEAALEWLETLPDREKERTGITHLSVDRNKTDGYYI-QV 484
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
G D ++ Q + + +KR Y TP+ E + + + + DM
Sbjct: 485 GKSET-------DAVPDKYQHIKTLKN-----SKR--YTTPELDEKERDVLRLEERRHDM 530
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E ++L + + L AELD F SLA+ A +N++ RP + L I+ G
Sbjct: 531 EYERFQELRERVAQRATLLQDVGRTLAELDAFASLAVHAVENDWTRPAVVDGNELSIEAG 590
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E T + F+PND +D+D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +
Sbjct: 591 RHPVVEQTTE-FVPNDLYMDDDRQFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARS 649
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
ATVGL D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DG
Sbjct: 650 ATVGLVDGIFTRVGALDELAQGRSTFMVEMQELSNILHSATDESLVILDEVGRGTATFDG 709
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG-CLPKSERLKFYTMSVLRPENNSTDVE 700
I + Y V + K L TH EL G LP E + P + +D
Sbjct: 710 ISIAWAATEYIVNS-IQSKTLFATHYHELTALGEELPTVENVHVAVDG--EPRSAGSDG- 765
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE-RWSHENISAQ 759
D+ FL + G SYG+H A LAGVP V+ R+ VL+ +++K +E R S ++ S
Sbjct: 766 DVTFLRTVRDGPTDRSYGVHVADLAGVPEPVVDRSQAVLDRLRDDKAIEIRGSEQSDSGT 825
Query: 760 DQ 761
Q
Sbjct: 826 TQ 827
>gi|340351558|ref|ZP_08674470.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
gi|339617842|gb|EGQ22455.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
Length = 889
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 293/616 (47%), Gaps = 74/616 (12%)
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGF 204
I+ LEQ + + S I S+ + K+++LD +L++ + ++G
Sbjct: 252 IMQYLEQTQHTHIS-HITSLARIEEEKYVRLDRFTIRSLELVAPMQ----------EDGL 300
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ G++++ +TPMG R+L W + P+ D++ +N RL+ + ++ + L + L +
Sbjct: 301 SLLGVVDRTITPMGGRMLHRWLVFPLKDVKPINERLDIVEYYFREPDFRHCLDDQLHRMG 360
Query: 265 DIPHILKKFN----SPSFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLL 317
D+ I+ + SP + + + + KS C + VG +L E +R
Sbjct: 361 DLERIISRVAAGRVSPREVVQLKNALSAIQPIKSACLYSSNEALKRVGEQLNLCESIR-- 418
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
D +E+ +L G ++ GF ELDELR I E
Sbjct: 419 --DRIEQEIMSDPPQLV------------------AKGGVIAHGFNAELDELRSIRENGK 458
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
+ L ++ E + + I + + GY + + + + ++ A ++
Sbjct: 459 QVLLDIQEKEAAKTG-----INSLKIGFNNIFGYYLEVRNTFKNKVPQDWIRKQTLAQAE 513
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y TP+ +E + + KIL +E + +LV + + + N A
Sbjct: 514 R--------YITPELKEYEAKILGADEKILILEARLFNELVQDMQEYIPQIQINANLLAR 565
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR- 553
LDC LS A +A +N Y+RP++ ++DI+ GRH + E + + +IPND +DN+ +
Sbjct: 566 LDCLLSFANIAEENKYVRPMVDDSMVIDIKKGRHPVIETQLPLGEQYIPNDVYLDNEQQQ 625
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I +ITGPN +GKS ++Q ALIV L+ +G FVPA++A +GL D S +++ +S
Sbjct: 626 IMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARIGLVDKVFTRVGASDNISLGES 685
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVC 664
+FM+++ + +L T +SL L DE G+GT T DGI + + Y + L
Sbjct: 686 TFMVEMTEAANILNSVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRATARTLFA 745
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH E LNE R+K + +SV E N I+FL +L G + S+G+H A +
Sbjct: 746 THYHE-LNE-MAKNFHRIKNFNVSV--KEVNGK----IIFLRKLERGGSEHSFGIHVADI 797
Query: 725 AGVPAEVIKRAAYVLE 740
AG+P ++KRA VL+
Sbjct: 798 AGMPKSIVKRANIVLK 813
>gi|163848498|ref|YP_001636542.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222526432|ref|YP_002570903.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
gi|189030708|sp|A9WFZ9.1|MUTS_CHLAA RecName: Full=DNA mismatch repair protein MutS
gi|254766621|sp|B9LB04.1|MUTS_CHLSY RecName: Full=DNA mismatch repair protein MutS
gi|163669787|gb|ABY36153.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222450311|gb|ACM54577.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
Length = 966
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 278/570 (48%), Gaps = 59/570 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
GR S+ ++++ T MG RLLR W +P++ +E L R +A++ + E MA L
Sbjct: 352 GRQGAKASLIAVLDRTCTAMGARLLRRWITQPLIVIEPLQVRQHAVARLVA--ETMARL- 408
Query: 258 ETLKYVKDIPHILKKFNSPS---FIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
E + D+P + + N + + T D T ++ L V + + + + L ++
Sbjct: 409 EVRSALADLPDMERALNRIAQGITVATPRDMTQLRAALRKLPAVAQAVQALLPDLLAAEM 468
Query: 315 R---LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG---YGTLVREGFCDELDE 368
L FD+ + L ++G + R+ E+G ++R GF LD
Sbjct: 469 PGEPPLVFDVCADVLDLLERALDDDPPALLGSSNYLRAAEEGGERPRRVIRPGFDQRLDA 528
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTL 425
L + EF++ + S E + + + Y GY + I + KL
Sbjct: 529 LIRASRHAQEFIDRLESKERERTGIRSLK-----VGYNQVFGYYIEISRAVDAKLIPAHY 583
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
E+ Q ++ E Y T + + + LL D K++D+ER I + L +
Sbjct: 584 ERKQTL------VNAER----YVTEELKYYEGLLSDARLKLVDLERDIFQRLCDELQPHL 633
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPN 544
D L + A +D +LA VA + Y++P L + +L I+ GRH + E T+ + FI N
Sbjct: 634 DRLRATIAAVARIDALAALAEVAVRGRYVQPRLRTDRVLRIKQGRHPVVERTLSEPFIGN 693
Query: 545 DTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D +D + +I IITGPN +GKS +++QVALI ++ IGSFVPAD A +GL D
Sbjct: 694 DIDLDGEQAQILIITGPNMAGKSTFLRQVALITLMAQIGSFVPADEAEIGLVDRIFTRIG 753
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF--- 652
+ QS+FM+++ + +L Q+T +SL +LDE G+GT T DG+ + + Y
Sbjct: 754 AQDDIATGQSTFMVEMTETAALLMQSTPRSLIILDEVGRGTSTYDGMAIARAVVEYIHDH 813
Query: 653 --VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
+ C + L TH EL+ E LP R++ Y M+ + + +VFL+ L
Sbjct: 814 PRLGC----RTLFATHYHELIALERELP---RVRNYHMAAVERDGR------VVFLHELR 860
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
PG A SYG+H A LAG+P EVI+RA+ +L
Sbjct: 861 PGGADRSYGIHVAELAGIPPEVIRRASALL 890
>gi|222151137|ref|YP_002560291.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
gi|254766632|sp|B9EBI4.1|MUTS_MACCJ RecName: Full=DNA mismatch repair protein MutS
gi|222120260|dbj|BAH17595.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
Length = 846
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/608 (27%), Positives = 296/608 (48%), Gaps = 58/608 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
ID + +++LD A L++ ++ +H + G ++ + N+C TPMG R
Sbjct: 229 IDEAVYYEPVHYMRLDMYAKRNLELTESIRHKNKKG--------TLLSIFNQCKTPMGNR 280
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L++ W RP+L+ + + R N + F + L L E L +V DI + + +
Sbjct: 281 LVKEWIERPLLNRQEIEERHNGVELFNDNFILRHQLREALTHVYDIERLAGRVQFGNV-- 338
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL-NFDIVEKAASCITTELAYVYEL 339
+A D S+ L + + + E +R L N D ++ + E + + E
Sbjct: 339 SAKDLVQLKYSLEQLPMIQSLLK-----EHDEVIRTLDNIDALQPLYDML--EASLLDEA 391
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
I D G + ++GF +++DELR + ++L E+ + E + K +
Sbjct: 392 PTSIKD---------GGIFKDGFNNDVDELRYASKNGKQWLNELQAKERERTG--VKSL- 439
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y GY + I + L + ++ F + +R T + +E ++L+
Sbjct: 440 --KIGYNKVFGYYIEISKANLVNLDVD---AFGYTRKQTLSNAERFI--TEELKEKESLI 492
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K++++E + L + F +L + A LDC + + VA ++ Y++PI++
Sbjct: 493 LGAEEKLMNLEYELFIQLRDFVKTFILNLKQQAKNIAVLDCLQNFSEVATKHQYIKPIIS 552
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+L+I++ RH + E M D ++ ND ++D+ I +ITGPN SGKS Y++QVALI
Sbjct: 553 GTKVLNIEDARHPVVETVMERDQYVANDCKLDDHTFIYLITGPNMSGKSTYMRQVALISI 612
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +G+FVPA A V + D + + + QS+FM+++ + L+ AT SL +
Sbjct: 613 MAQMGAFVPASYAEVPIFDQIFTRIGAADDLVSGQSTFMVEMLEAKNALQNATDNSLIIF 672
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V + K L TH EL++ E L +
Sbjct: 673 DEIGRGTSTYDGLSLAQSMIEY-VHNKIGAKTLFSTHYHELVDLEQTLD-----GLNNIH 726
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
V E N +++FL++++PG SYG+H A LA +PAE+I+R++ +L+ ++N+ V
Sbjct: 727 VAAKEYNG----ELIFLHKVMPGAVEHSYGIHVAKLAQLPAEIIERSSELLDEFEHNEKV 782
Query: 749 ERWSHENI 756
+ I
Sbjct: 783 RKGDSNKI 790
>gi|406909772|gb|EKD49954.1| hypothetical protein ACD_63C00001G0002 [uncultured bacterium]
Length = 830
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 271/546 (49%), Gaps = 54/546 (9%)
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
+++ +T MG RLLRN L P++++E + +RL+++ F L + E LK V D+
Sbjct: 297 VLDDTLTSMGGRLLRNSVLSPLINVEKIKNRLDSVEEFCKDNILREEVGEKLKEVSDLER 356
Query: 269 ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASC 328
+ K S A D A S+ + + I + S+ L LN
Sbjct: 357 LAGKIGCMS--ANARDLLALKDSLKIIPALKSILKNVDSKRLIFLKNNLN---------- 404
Query: 329 ITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE- 387
E+ V +L+ +D + G L+++G+ +LD+++ E+++ + E
Sbjct: 405 ---EIKEVVDLIEKSVDESSPVTLKDGNLIKKGYDAKLDKIKDAAISGKEWIKTLQRKES 461
Query: 388 -LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
++P L + + GY + + + L + ++ ++
Sbjct: 462 ARAKIPSLK-------VKFNRVFGYYIEVSKTNLSQVPSDYIRKQTLVNAER-------- 506
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ TP+ +E ++L+ + +++++E I ++ + + + K AELD + A
Sbjct: 507 FITPELKEKEDLILNAEERMIELEFRIFVEIRDKVSEYIKDIQKVAKILAELDLLSNFAR 566
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEM--TVDTFIPNDTRIDNDG-RINIITGPNYS 563
+A NNY +P + + L+I+ GRH + E + +F+PND +DN ++ ++TGPN S
Sbjct: 567 IAINNNYTKPKVDTDDGLEIKEGRHPVVERIKSAGSFVPNDVSLDNKNCQLIVLTGPNMS 626
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS YI+Q ALI ++ IGSFVPA +G+ D S +T QS+FM+++ +
Sbjct: 627 GKSTYIRQNALITLMAQIGSFVPAAFVKIGVVDRIFTRVGASDALTRGQSTFMVEMQETA 686
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-E 673
+L ATS+SL +LDE G+GT T DG+ + Y V+ + + K L TH ELL E
Sbjct: 687 NILNNATSRSLIILDEIGRGTSTFDGVSIAWAVAEYIVSKEKLGAKTLFATHYHELLELE 746
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
LP R+K + ++V ++ ++FLY+++ G SYG++ LAG+P EV++
Sbjct: 747 KILP---RVKNFNVAVKESKDK------VIFLYKILRGGTNRSYGIYVGKLAGLPKEVVR 797
Query: 734 RAAYVL 739
RA VL
Sbjct: 798 RAEDVL 803
>gi|434391871|ref|YP_007126818.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 7428]
gi|428263712|gb|AFZ29658.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 7428]
Length = 852
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 204/768 (26%), Positives = 345/768 (44%), Gaps = 106/768 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFL 65
A ++ G+ G++Y D S + + +SN + ++++ Q ++ T+ L
Sbjct: 144 AVVIAGNHWGLAYADISTGEFLTTQ---ESNLEQLTQELMRLQPSEVLVPTNAPD----L 196
Query: 66 SALKRSDGTTE--------APTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY 117
+L R T+E A L + F+ +A RLI K R+
Sbjct: 197 GSLLRPGETSEHLPACLPPAFCYALRSHTAFTQSEARQRLIQ------------KFRV-- 242
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
S+ +G E + VRA+GGLL LE QKE+ I + ++ +++ +L
Sbjct: 243 -RSLEGLGCEHLPLAVRAAGGLLQYLEET-------QKEN---PIALQALRTYTISDYLI 291
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD + L+I QT + + G S+ +++ T MG R LR WFL+P++D++
Sbjct: 292 LDHQSRRNLEITQTVRDGTFHG--------SLLWALDRTSTAMGGRALRRWFLQPLIDIK 343
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+++R + I + L L L+ + D+ + + S S A D A S+
Sbjct: 344 GIHARQDTIEELIEDSSLRQDLRSCLRQIYDLERLTGRAGSGS--ANARDLVALADSLAR 401
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + +I E S LR ++ ++E+ A+ + L +++
Sbjct: 402 LPEIARIVETARSPYLRALQKVPA--VLEELAAKLRNYLVESPPILLS-----------E 448
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
G L+R G +LDE R E ++ +A+LE+ + L E+ + Y GY +
Sbjct: 449 GGLIRPGVHSQLDERRTTVEADQQW---IANLEVEE--RLKTEIPTLKVGYNKTFGYYIS 503
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
I K D Q+ + E + Y TP+ +E ++ + + + +E +
Sbjct: 504 ISRSKAD-----QVPQHYIRKQTLTNEER---YITPELKERESRILNARDDLNRLEYEVF 555
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--V 532
L S + ++ + A D LA VA Y RP + + I +GRH V
Sbjct: 556 AQLRSEVAEHAELIRNISRAVAAADVLCGLAEVAVYQGYCRPEMVEGREIHIVDGRHPVV 615
Query: 533 LQEMTVDTFIPNDTRI----DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
Q + F+PN T + D + I+TGPN SGKS Y++QV LI ++ +GSFVPA
Sbjct: 616 EQSLPAGFFVPNSTFLGSSDDQSPDLIILTGPNASGKSCYLRQVGLIQLMAQVGSFVPAS 675
Query: 589 AATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A +G+ D + QS+FM+++++ +L AT +SL LLDE G+GT T D
Sbjct: 676 SARLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATRRSLVLLDEIGRGTATFD 735
Query: 641 GIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE 700
G+ + Y T ++ + + TH E LNE L +V + ++
Sbjct: 736 GLSIAWAVAEYLAT-EIQARTIFATHYHE-LNE--------LASILTNVANYQVTVKELP 785
Query: 701 D-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
D I+FL+++ PG A SYG+ LAG+P VI+RA V+ Q KH
Sbjct: 786 DQIIFLHQVQPGGADKSYGIEAGRLAGLPTVVIQRAKQVM--GQIEKH 831
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 881
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 286/595 (48%), Gaps = 69/595 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
+DA +++F+T + G S+F +++ +T MG RLLR W P+LD+E
Sbjct: 272 IDAMTRRNMELFRTLRDGKREG--------SLFWALDRTLTGMGTRLLRYWLESPLLDIE 323
Query: 235 NLNSRLNAI-----SFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ +R A+ SFFL +E L E LK + D+ I+ + + + D
Sbjct: 324 EIEARQEAVEELAGSFFLRNE-----LQECLKKIYDLERIISRVDWQ--LAGPRDLLGLA 376
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
KS+ + + +I S+ LRE A +A + E++ + +
Sbjct: 377 KSLQVIPDLKEILGQAKSKMLRE-------------AGVELDPVADIKEMLFSALIDDPP 423
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G ++R G+ E+D+LR + E +++ ++ + E V+ K + I Y
Sbjct: 424 ANLKNGGIIRTGYHPEVDKLRNMIAEGEDWIRKLEARERVRTG--IKSL---KIDYNKVF 478
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + + L L ++ + +R T + +E + L ++ D+
Sbjct: 479 GYYIEVTKPNL------HLVPGDYIRKQTLTQAERFI--TTELKEQEALFLGATERLQDL 530
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E I D+ + S+ + + A +DC +S A A + +Y +P + ++ I+NG
Sbjct: 531 EYQIFLDIRRQVGEASEKIRRNAGIIARIDCLVSFAETAARYHYTKPKINNSGVIRIKNG 590
Query: 530 RH-VLQEMTVD-TFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH VL+++ + +F+PND I D RI I+TGPN +GKS Y++Q+ALIV ++ GS VP
Sbjct: 591 RHPVLEQLLPEGSFVPNDLEIGEDADRILILTGPNMAGKSTYMRQMALIVLMAQCGSLVP 650
Query: 587 ADAATVGLTDSKHMTA--------EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
AD A +G+ D + A QS+FM+++++V ++ AT +S +LDE G+GT T
Sbjct: 651 ADEAEIGIVDRVFVRAGAFDDLGKGQSTFMMEMNEVSYIVHHATERSFIVLDEIGRGTGT 710
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGIG+ I Y + + + + TH +L + SV E
Sbjct: 711 FDGIGIAWAIIEY-IHDKIGARTIFATHYHQLTQLADILHG----VANCSVAVQEEG--- 762
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA---AYVLEAAQNNKHVER 750
++IVFL+++VPG SYG+ A LA +P E+++RA A +E NK +R
Sbjct: 763 -QNIVFLHKVVPGGTDKSYGIQVARLAHLPEELVQRAQEVAASMEGGSGNKSGKR 816
>gi|441499742|ref|ZP_20981917.1| DNA mismatch repair protein MutS [Fulvivirga imtechensis AK7]
gi|441436482|gb|ELR69851.1| DNA mismatch repair protein MutS [Fulvivirga imtechensis AK7]
Length = 869
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/608 (26%), Positives = 295/608 (48%), Gaps = 75/608 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++++ LD L++ +P H G G + +++ VTPMG R
Sbjct: 255 ISSISRIDEDRYVWLDKFTIRNLELI----YPQHDG------GVPLIDVLDCTVTPMGSR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W + P+ ++ +N RL + F ++EL+ + + LK + D+ ++ K
Sbjct: 305 LLKKWMVLPLKEITAINQRLKTVKGFYENQELLDDIQQNLKQIGDLERLISKVAVGRI-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNFDIVEKAASCITTELAYVY 337
+ K++ + + + + E L+ +Q+ F ++EK I EL
Sbjct: 363 NPREMNQLKKALQNTAPIKQTLQASSFEELKKLADQINPCEF-LLEK----INKELKEEV 417
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLC 395
L + G L+R+G +ELDELR+I ++L ++ E+ + +P L
Sbjct: 418 PLTANV-----------GGLIRDGVNEELDELRKIAYSGKDYLIQIQKREVERTGIPSLK 466
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
I Y GY + + + E ++ ++ Y T + +
Sbjct: 467 -------IAYNKVFGYYLEVSNAHKEKVPSEWIRKQTLVNAER--------YITEELKIY 511
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++ + + K+ +E+ + +LV+ + + + A +DC S A++A N Y+
Sbjct: 512 EDKILNAEEKLFVIEQQLFMELVTSAADYVTQIQQNARVLATIDCLNSFAIIAKSNKYVM 571
Query: 516 PILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQ 571
P + +DI+ GRH + E + +++IPND +DND +I IITGPN +GKS ++Q
Sbjct: 572 PEVNDSTAIDIKEGRHPVIEKQLPLGESYIPNDVFLDNDHQQIMIITGPNMAGKSALLRQ 631
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
ALIV ++ +GSFVPA +A++G+ D S +++ +S+FM+++ + +L +
Sbjct: 632 TALIVLMTQMGSFVPAKSASIGIIDKVFTRVGASDNLSKGESTFMVEMTETASILNNLSD 691
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTEL--LNEGCLPKSE 680
+SL L+DE G+GT T DG+ + + + D K L TH EL L E P
Sbjct: 692 RSLVLMDEIGRGTSTYDGVSIAWSIVEFLHNHRDYRVKTLFATHYHELNQLTED-FP--- 747
Query: 681 RLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K + +SV +V D I+F+ +L G + S+G+H A LAG+P +V+ RA ++
Sbjct: 748 RIKNFNVSV-------KEVGDKIIFMRKLKEGGSEHSFGIHVAQLAGMPNKVVIRANEIM 800
Query: 740 EAAQNNKH 747
+ +KH
Sbjct: 801 HFLEKDKH 808
>gi|281352256|gb|EFB27840.1| hypothetical protein PANDA_021865 [Ailuropoda melanoleuca]
Length = 366
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 198/362 (54%), Gaps = 20/362 (5%)
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
++L Y + +T+ELD LLGD++ I D E L + + L + ++ A+ LD L
Sbjct: 6 EKLHYRSARTKELDALLGDLHCDIRDQETLWMYQLQCQVLARAAVLSRVLDLASRLDVLL 65
Query: 503 SLALVAHQNNYMRPILTLEPL-LDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGP 560
+LA A Y RP + + L + IQNGRH L E+ TF+PN D GR+ +ITGP
Sbjct: 66 ALASAARDYGYSRPRYSPQLLGVRIQNGRHPLMELCARTFVPNSAECGGDRGRVKVITGP 125
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLH 612
N SGKSIY+KQV LI F++ +GSFVPA+ A +G D+ + ++ S+FM+DL+
Sbjct: 126 NSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMLDLN 185
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELL 671
QV + AT QSL L+DEFGKGT T DG+ LL + +++ + P + V T+ L+
Sbjct: 186 QVAKAVNNATKQSLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPMCPHIFVATNFLSLV 245
Query: 672 NEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
LP+ +++ TM D +D+VF Y++ G A S+ H A AG+P ++
Sbjct: 246 QLQLLPQGPLVQYLTM------ETCEDGDDLVFFYQVCEGIAKASHASHTAAQAGLPDQL 299
Query: 732 IKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG--DLRLFF-QDLL 788
+ R V + ++ K ++ Q + + V+K L D+ DL LF Q++L
Sbjct: 300 LTRGKEVSDLIRSGKPIKPVKELLKEKQMENCQMLVDKFLKLDLEDPNLDLDLFMSQEVL 359
Query: 789 PS 790
P+
Sbjct: 360 PA 361
>gi|381180540|ref|ZP_09889379.1| DNA mismatch repair protein MutS [Treponema saccharophilum DSM
2985]
gi|380767528|gb|EIC01528.1| DNA mismatch repair protein MutS [Treponema saccharophilum DSM
2985]
Length = 881
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/614 (27%), Positives = 292/614 (47%), Gaps = 76/614 (12%)
Query: 151 QKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMM 210
QK + A+ I+S+ ++F+ +D ++ L+I +++ G A+ FS+ ++
Sbjct: 258 QKMTITATPHINSIKVYKDSQFVMMDDSSRRNLEIV------ANLRDGSAQ--FSLLEVI 309
Query: 211 NKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHIL 270
+ T MGRRLLR+W L P+ + ++ R + +SFF + + L + D+ +
Sbjct: 310 ARTRTAMGRRLLRSWLLYPLRSVGDIKMRQDDVSFFFGNGGMRDDAESLLSSILDVERLA 369
Query: 271 KKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI--VEKAASC 328
+ A D A S+ + + + E+L F +EKA
Sbjct: 370 GRIAMER--AHAKDLQALRASLDAWIR------------MAEKLSAAGFGTFELEKARE- 414
Query: 329 ITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE- 387
+ L+ I+ + S G G +V+ G+ ELD R + E LEE A+ E
Sbjct: 415 -------ISALISSSIEEDPSTTFGDGRVVKAGWSSELDGYRDMQENAGRILEEYAAEEQ 467
Query: 388 -LVQLPHLCKEMFVPCIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
L + +L + ++ I GY + I K+ + SD
Sbjct: 468 RLTGIQNLR--------IKVNSISGYYIEITRGKVSQVPPHFIMRRSLTNSDR------- 512
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
+ TP+ +E++ + + +I++ ERA+ ++ + I S ++L + A +D +LA
Sbjct: 513 -FTTPRLQEIERQMNEAASRIVETERALFAEIRAKIAAESSYILSVAHKIAYVDVVSALA 571
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRI----DNDGRINIITG 559
A N ++RP++ + + GRH + E + + F+PND + D +ITG
Sbjct: 572 SSAVLNRWVRPVVDDGDVFRVVGGRHPVVEAHLPSGEFVPNDIVVSSAGDGSASFGLITG 631
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDL 611
PN +GKS Y++Q AL+ ++ IGS+VPA+ A VG+ D S ++ +S+F++++
Sbjct: 632 PNMAGKSTYLRQNALLALMAQIGSYVPAEEAHVGVVDRIFCRVGASDNLARGESTFLVEM 691
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELL 671
+ +LR AT +SL ++DE G+GT TEDG+ + Y + + K L TH E L
Sbjct: 692 TETAYILRGATRKSLVIMDEVGRGTSTEDGLSIAWAVSEYLLNT-IQCKTLFATHYHE-L 749
Query: 672 NEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
P LK M VL D + +VFL ++ G + SYG+H A LAG+P V
Sbjct: 750 TRMVHPS---LKLMCMDVLE------DGDKVVFLRKMKEGASENSYGIHVASLAGIPQTV 800
Query: 732 IKRAAYVLEAAQNN 745
IKRA+ +L + Q++
Sbjct: 801 IKRASEILSSLQDS 814
>gi|389846000|ref|YP_006348239.1| DNA mismatch repair protein [Haloferax mediterranei ATCC 33500]
gi|448616384|ref|ZP_21665094.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
gi|388243306|gb|AFK18252.1| DNA mismatch repair protein [Haloferax mediterranei ATCC 33500]
gi|445751039|gb|EMA02476.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
Length = 909
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 192/683 (28%), Positives = 309/683 (45%), Gaps = 91/683 (13%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKLDATAHEALQ 184
SE+ RA+GG+LA +E E+G + + ++V + L+LDAT L+
Sbjct: 221 SELATRAAGGILAYVE-----------ETGAGVLRSMTRLQVYHPSDLLELDATTQRNLE 269
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T H G S+F ++ VT G RLLR W RP D + L+ RL+A+
Sbjct: 270 LTET-MHGDRSG--------SLFDTIDHTVTSPGGRLLREWLTRPRRDRDELSRRLDAVQ 320
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHVNK 300
+ + E L D+ + + S S + + D L ++ + +
Sbjct: 321 SLASAALARERVREVLDGAYDLERLASRAASGSAGANDLLSVRDTLDVLPALTDAIEGTE 380
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+ + ++E + + D AA+ + ELA + + K G L ++
Sbjct: 381 LADSPLAEVVSRP----DGD----AAAGLQAELADA-------LAEDPPKTVTQGGLFQK 425
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC--IF 416
G+ DELD L + +E +L+ +A E Q L H+ + YI Q+G + +
Sbjct: 426 GYDDELDGLIERHESAKSWLDTLADREKRQHGLSHVTVDRNKTDGYYI-QVGKSVADQVP 484
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
E TL+ + F T+ L + L+ GD+ +++ +D
Sbjct: 485 EHYRQIKTLKNSKRFV---------TEELEEKEREVLRLEEARGDLEYELF-------QD 528
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L + ++ L AE+D SLA A N + RP LT L I+ GRH + E
Sbjct: 529 LRERVAAHAELLQDVGRTIAEVDALASLATHAAGNGWTRPELTDAGPLRIEAGRHPVVET 588
Query: 537 TVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
T + F+PND +D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +AT+G+ D
Sbjct: 589 TTE-FVPNDLHMDRERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARSATIGVVD 647
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ +S+FM+++ ++ +L AT SL +LDE G+GT T DGI +
Sbjct: 648 GIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIAWAA 707
Query: 649 INYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENNSTDVEDIVFLYR 707
Y +V K L TH EL ++ L + + V E + D+ FL
Sbjct: 708 TEYL-HNEVQAKTLFATHYHELTT-----LADHLDRVANVHVAADERDG----DVTFLRT 757
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAV 767
+V G SYG+H A LAGVP V+ RA VL+ ++ K +E A+ V
Sbjct: 758 VVDGPTDRSYGIHVADLAGVPRPVVDRAGDVLDRLRDEKAIE--------AKGSGSAEPV 809
Query: 768 EKMLAFDVLKGDLRLFFQDLLPS 790
+ + FDV G +++ D P+
Sbjct: 810 QAV--FDVGSGQMKVAESDGSPA 830
>gi|332799274|ref|YP_004460773.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
gi|332697009|gb|AEE91466.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 869
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 282/569 (49%), Gaps = 70/569 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R K G S+ +M+K T MG RLLR W +P+LD+ + R +AI L + L E
Sbjct: 283 RKKTG-SLLWVMDKTSTAMGARLLRKWLEQPLLDILKIKQRQDAIEELFNDFFLRSDLKE 341
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLR 315
LK + DI + K + A D A +I SL + I S+ L EQL
Sbjct: 342 QLKNIYDIERLSGKLVCGN--ANARDLLAIKNTIKSLPQIKHILTRCNSKLLHQIYEQLD 399
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L DI C+ E + + + I + N ++++G+ E+D LR+ E
Sbjct: 400 PLE-DI------CLLLEKSIFEDPPLTIKEAN---------VIKDGYNSEIDMLRKASRE 443
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+ +A LE + + I + GY + + + L ++ A
Sbjct: 444 GKAW---IADLERKERESTGIKSLK--IGFNKVFGYYIEVTKSNLSMVPENYIRKQTLAN 498
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E ++L+ + K+ ++E + C D L+K +
Sbjct: 499 AER--------YITEELKEYESLILNANEKLQELEYNL-------FCEIRDQLIKEIPRL 543
Query: 496 AE-------LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDT 546
+ LD LSLA V++ NNY++P + L ++I +GRH + E+T + FIPNDT
Sbjct: 544 KQSAYNLSLLDVLLSLAEVSYSNNYIKPEVNLSDEINIIDGRHPVVELTQKEELFIPNDT 603
Query: 547 RID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------S 597
+ID +D I++ITGPN +GKS Y++QVALIV ++ IG F+PA A +G+ D S
Sbjct: 604 QIDCSDNLISVITGPNMAGKSTYMRQVALIVLMAQIGCFIPAKKAKIGIVDRIFTRIGAS 663
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
++ QS+FM+++ +V +L AT++SL +LDE G+GT T DG+ + I Y + ++
Sbjct: 664 DNLALGQSTFMVEMTEVADILNNATNKSLLILDEVGRGTSTFDGLSIAWAVIEY-IQKNL 722
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
K L TH EL L K + +K Y ++V +D++FL ++VPG A SY
Sbjct: 723 KAKTLFATHYHEL---TALKKLKGVKNYKITV------KEKGDDVIFLRKIVPGEADKSY 773
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
G+ A LAGVP VI RA +L + N+
Sbjct: 774 GIQVAKLAGVPNAVINRARKILVDLEQNQ 802
>gi|406927223|gb|EKD63285.1| hypothetical protein ACD_51C00302G0003 [uncultured bacterium]
Length = 870
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 273/551 (49%), Gaps = 52/551 (9%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
+EG S+ G+++ T MG R+L+ W LRP+L E +++RL+ + L L L
Sbjct: 280 REG-SLLGVIDSTATAMGGRMLKKWLLRPLLKKEEIDARLDGVLELTRKPTLRNDLRAKL 338
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
+ D+ ++ + + + A D A S+ ++ + KI SE L++ L F+
Sbjct: 339 GTMLDLERLIARLSCAT--GNARDLIALKISLQTVPEMKKILSSAESEILKKANERL-FE 395
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
I EK I + ++++ G L+++GF ELD+LR + E F+
Sbjct: 396 I-EKLTDLIEKAILDEPKMILR-----------EGGLIKKGFFRELDDLRNLSTEGKTFI 443
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+ + E+ + V +++ GY + + + L + ++ ++
Sbjct: 444 QNLQQREI------ARTGISSLKVRFNKVFGYYIEVSKANLSLVPPDYIRKQTLVNAER- 496
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
+ TP+ +E + + KI+++E I ++ S F + + LD
Sbjct: 497 -------FVTPELQEYEEKVLTAEEKIIELEYKIFLEVKSQALEFIEEIQADAEIIGILD 549
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMT-VDTFIPNDTRIDNDGR-INI 556
S A A +N Y RP +T + LL I+ GRH V+++MT TF+ ND+ +D++ R + +
Sbjct: 550 VIGSFAETAVKNRYCRPEVTNKQLLKIKEGRHPVVEQMTFARTFVSNDSFLDHENRQLLL 609
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN SGKS Y++QVALI ++HIGSFVPA +A +GLTD S ++ QS+FM
Sbjct: 610 ITGPNMSGKSTYLRQVALITLMAHIGSFVPAASAEIGLTDRIFTRVGASDNLVRGQSTFM 669
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+++ + ++ AT +SL +LDE G+GT T DG+ + Y + + K L TH
Sbjct: 670 VEMQETANIINNATERSLIILDEIGRGTSTYDGMSIAWAICEY-IHDKIKAKTLFATHYH 728
Query: 669 ELLNEGCLPKSERL-KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL +P ERL K V E+ + I+FLY+++ G SYG+ LAG+
Sbjct: 729 EL-----IPVVERLEKGVNCHVTAKEDKD---KGIIFLYKILEGGIDKSYGIEVGRLAGL 780
Query: 728 PAEVIKRAAYV 738
P E+ +A +
Sbjct: 781 PVEITSKAKQI 791
>gi|294777418|ref|ZP_06742869.1| DNA mismatch repair protein MutS [Bacteroides vulgatus PC510]
gi|294448486|gb|EFG17035.1| DNA mismatch repair protein MutS [Bacteroides vulgatus PC510]
Length = 883
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/600 (28%), Positives = 294/600 (49%), Gaps = 75/600 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +++++LD +L++ IG EG S+ ++++ ++PMG
Sbjct: 266 ITSLSRIEEDRYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDRTISPMGA 314
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D + +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 315 RLLKRWVVFPLKDEKPVNERLDVVEYFFRKPDFKEFIEEKLHLIGDLERIVSKAAVGRIS 374
Query: 276 PSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
P + L++I + + + G + EQL + I EK A + +
Sbjct: 375 PREVV---QLKVALQAIEPIKNACLNADNGSLRRIGEQLNIC-LSIREKIAKEVKNDPPL 430
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPH 393
+ VN+ G ++ +G ELDELRQI ++L +V E L +P
Sbjct: 431 L---------VNK------GGVIADGVNAELDELRQIAFSGKDYLLKVQQRESELTGIPS 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
L I Y + GY + + D + ++ ++ Y T + +
Sbjct: 476 LK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YITQELK 520
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KIL +E + +LV + F + + A LDC L+ A VA +NNY
Sbjct: 521 EYEEKILGAEDKILVLETKLYNELVIALAEFIPAIQINASQIARLDCLLAFANVAKENNY 580
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYI 569
+RP++ ++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS +
Sbjct: 581 IRPVVEDSEVIDIRQGRHPVIEKQLPVGEKYIANDVFLDSETQQIIIITGPNMAGKSALL 640
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI L+ +GSFVPA++A +G+ D S +++ +S+FM+++++ +L
Sbjct: 641 RQTALITLLAQMGSFVPAESARIGMVDKIFTRVGASDNISVGESTFMVEMNEAANILNNL 700
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKS- 679
+S+SL L DE G+GT T DGI + + + + L TH E LNE + KS
Sbjct: 701 SSRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKAKARTLFATHYHE-LNE--MEKSF 757
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 758 KRIKNYNVSVKEIDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANDIL 811
>gi|402302217|ref|ZP_10821337.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC9]
gi|400381204|gb|EJP34008.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC9]
Length = 869
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 171/596 (28%), Positives = 284/596 (47%), Gaps = 76/596 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N+ LDA A L + + + ++F +++ TPMG RLL++W
Sbjct: 250 INRLSFLDAAAGMQLDTYTLRNLEITRSLRDGGKKHTLFDVLDFTRTPMGTRLLKSWLEH 309
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L +++RL+A++ + + L A L E L+ + D +L + + + A D A
Sbjct: 310 PLLAPHRIDARLDAVAELVSASSLRAKLRELLRSIYDFERLLTRIETQA--ANARDLVAL 367
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
S+ +L V S RLL +AA I T L+ I+D
Sbjct: 368 RVSLAALPGVRAALSGAKS-------RLLT-----RAAEGIETFDDLRELLMAAIVD--- 412
Query: 349 SKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
E G G ++R G+ DELDEL + + L+E+ E + + I
Sbjct: 413 --EPGLSVRDGGIIRMGYSDELDELHRFSHDSKSLLQEMEERERDR-----TGIKTLKIG 465
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + D + ++ A ++ + T + +E + +
Sbjct: 466 YNKVFGYYIEVRHSGSDRVPADYIRKQTLANAER--------FITEELKEFETKILSAQE 517
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFA---AELDCFLSLALVAHQNNYMRPILTLE 521
KI+ +E ++ +L + + L+ N A A +D S+A A Y+RP++
Sbjct: 518 KIVALEYSLFAELRDRV---KERLVPIQNVARMIARVDVLQSMAEAAASYRYVRPVI--R 572
Query: 522 PLLD----IQNGRHVLQE--MTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVAL 574
P D I++GRH L E + D F+PNDT + + G +ITGPN +GKS Y++QVAL
Sbjct: 573 PASDGEIIIKDGRHPLVERLLERDLFVPNDTHLSHGGTETMLITGPNMAGKSTYMRQVAL 632
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
+ ++ +GSFVPA +A + D S + + QS+FM+++++V +LR+AT SL
Sbjct: 633 LTLMAQVGSFVPARSAEIAPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILREATRDSL 692
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLK 683
+LDE G+GT T DG+ + + + + + K L TH LTE+ N ER++
Sbjct: 693 VILDEIGRGTSTFDGMSIARAVVEH-IDTRIHAKTLFATHYHELTEMAN-------ERIR 744
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
Y ++V R + +VFL R+V G A SYG+H A LAG+P +V +RA +L
Sbjct: 745 NYCIAV-REKGRG-----VVFLRRIVAGAADKSYGIHVARLAGLPPKVTERAEEIL 794
>gi|429748845|ref|ZP_19282003.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429169535|gb|EKY11282.1| DNA mismatch repair protein MutS [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 862
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 283/565 (50%), Gaps = 52/565 (9%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G + + S+ +++K ++PMG R L+ W P+ +E + R +++FL + S+
Sbjct: 276 GSSAQSVSLLDVIDKTLSPMGSRTLKRWLALPLKKIEKIRQRHEVVAYFLKQLPELESIK 335
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
E + + DI ++ K + + ++ SL H+ +I ++ ++ S E L LL
Sbjct: 336 EHIARIGDIERLISKVATQKI-----NPREVVQLCSSLEHIPQIKQLCLT-SGNESLSLL 389
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
+ + C A + E + VN +K G + G+ ELDELR +
Sbjct: 390 GDKLHDCQQLC-----ARIRETLNEEAPVNIAK----GNAIAAGYSAELDELRGLSHSGK 440
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQ--IGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+L+++ E + +P + + GY + + D + ++
Sbjct: 441 SYLDDLLLRE-------TQRTGIPSLKIDNNNVFGYYLEVRNTHKDKVPADWVRKQTLVN 493
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E + + KI +E+A+ +L+++I + + +
Sbjct: 494 AER--------YITNELKEYEAKILGAEEKIGQLEQALYAELLNYIAEYIAPVQQNAILV 545
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDNDG 552
++DC A +A QNNY +P ++ + ++DI+ GRH + +++ +DT +I ND +D +
Sbjct: 546 GQIDCLAGFATLALQNNYQQPEMSDDYVIDIKEGRHPVIEKQLPIDTPYIANDVYLDREQ 605
Query: 553 R-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+ I +ITGPN SGKS ++Q ALIV L+ IGSFVPA +A +G+ D S +++
Sbjct: 606 QQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPATSAHIGIIDKIFTRVGASDNISLG 665
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLV 663
+S+FM+++++ ++L + +SL LLDE G+GT T DGI + Y K L
Sbjct: 666 ESTFMVEMNEAALILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPSRAKTLF 725
Query: 664 CTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH E LNE ER+K Y +SV +TD ++FL +LV G + S+G+H A
Sbjct: 726 ATHYHE-LNE-MTESFERIKNYNVSV----KETTD--SVLFLRKLVAGGSAHSFGIHVAK 777
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHV 748
+AG+P VI++A +L+ + N ++
Sbjct: 778 MAGMPQYVIQKANKMLQKLEENHNI 802
>gi|438002405|ref|YP_007272148.1| DNA mismatch repair protein MutS [Tepidanaerobacter acetatoxydans
Re1]
gi|432179199|emb|CCP26172.1| DNA mismatch repair protein MutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 843
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 282/569 (49%), Gaps = 70/569 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R K G S+ +M+K T MG RLLR W +P+LD+ + R +AI L + L E
Sbjct: 253 RKKTG-SLLWVMDKTSTAMGARLLRKWLEQPLLDILKIKQRQDAIEELFNDFFLRSDLKE 311
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLR 315
LK + DI + K + A D A +I SL + I S+ L EQL
Sbjct: 312 QLKNIYDIERLSGKLVCGN--ANARDLLAIKNTIKSLPQIKHILTRCNSKLLHQIYEQLD 369
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
L DI C+ E + + + I + N ++++G+ E+D LR+ E
Sbjct: 370 PLE-DI------CLLLEKSIFEDPPLTIKEAN---------VIKDGYNSEIDMLRKASRE 413
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+ +A LE + + I + GY + + + L ++ A
Sbjct: 414 GKAW---IADLERKERESTGIKSLK--IGFNKVFGYYIEVTKSNLSMVPENYIRKQTLAN 468
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E ++L+ + K+ ++E + C D L+K +
Sbjct: 469 AER--------YITEELKEYESLILNANEKLQELEYNL-------FCEIRDQLIKEIPRL 513
Query: 496 AE-------LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDT 546
+ LD LSLA V++ NNY++P + L ++I +GRH + E+T + FIPNDT
Sbjct: 514 KQSAYNLSLLDVLLSLAEVSYSNNYIKPEVNLSDEINIIDGRHPVVELTQKEELFIPNDT 573
Query: 547 RID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------S 597
+ID +D I++ITGPN +GKS Y++QVALIV ++ IG F+PA A +G+ D S
Sbjct: 574 QIDCSDNLISVITGPNMAGKSTYMRQVALIVLMAQIGCFIPAKKAKIGIVDRIFTRIGAS 633
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
++ QS+FM+++ +V +L AT++SL +LDE G+GT T DG+ + I Y + ++
Sbjct: 634 DNLALGQSTFMVEMTEVADILNNATNKSLLILDEVGRGTSTFDGLSIAWAVIEY-IQKNL 692
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
K L TH EL L K + +K Y ++V +D++FL ++VPG A SY
Sbjct: 693 KAKTLFATHYHEL---TALKKLKGVKNYKITV------KEKGDDVIFLRKIVPGEADKSY 743
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
G+ A LAGVP VI RA +L + N+
Sbjct: 744 GIQVAKLAGVPNAVINRARKILVDLEQNQ 772
>gi|168334525|ref|ZP_02692686.1| DNA mismatch repair protein MutS [Epulopiscium sp. 'N.t. morphotype
B']
Length = 846
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 290/604 (48%), Gaps = 51/604 (8%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
++K+G S+ +++K VTPMG+R ++NW L P+LD + R +A++ + + L + L E
Sbjct: 269 KSKKG-SLLSILDKAVTPMGKREIKNWILTPLLDKSQILLRQDAVAELVQNIFLASDLRE 327
Query: 259 TLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
LK + D+ I+ K + A D SI L + + S L R N
Sbjct: 328 YLKSIYDLEKIVAKIGYKTC--NAKDLIVLKDSILYLAAIQDLIATTTSXELSTISR--N 383
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
DI+E +Y L+ I+ + G ++++ + E+ +L+ I ++
Sbjct: 384 LDILED-----------IYTLINSAINEDAPLSIKDGGIIKKTYSSEVFKLKDIKDKGAS 432
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
+L E+ + E + K + + Y GY + + + L +
Sbjct: 433 WLVEIEARE--RESTGIKNLKIK---YNKVFGYFLEVTNSN------KNLVPEHYTRKQT 481
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+R Y T + ++++ + + I +E I ++V I +L+ A+L
Sbjct: 482 LVNCER--YITEELKDIEEQILNADSLICQLEYDIFMEVVQKIETNIKRILETSKNIAKL 539
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRI-DNDGRIN 555
D ++S + VA NY+RP +T ++I GRH + E + T FI NDT + D +I
Sbjct: 540 DAYISXSAVAISXNYVRPTITTNGEINIAAGRHPVAETIIGTQSFISNDTCLGQEDTQIA 599
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN GKS Y+KQV LIV L+ IGSFVPA +A + + D S + + +S+F
Sbjct: 600 LITGPNMGGKSTYMKQVGLIVILAQIGSFVPATSAEISVVDKIFTRVGASDDLISGKSTF 659
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++ +V +L ATS SL +LDE G+GT T DG+ + I Y V K L TH
Sbjct: 660 MVEMSEVSNILINATSNSLLILDEIGRGTSTLDGLSIAQAVIEYIAINKVGAKTLFSTHY 719
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL + + +K Y ++V + +N+ ++FL+++ G A S+GL A LAG+
Sbjct: 720 HEL--PQLVNQYANIKNYCVTVQQNKNS------LIFLHKIAEGVAGKSFGLEVAKLAGL 771
Query: 728 PAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFFQDL 787
P +V+ RA +L K + + E + A Q Y +E D++ + DL
Sbjct: 772 PVDVLHRAGQILSKLDAEK-LNATNSEVLPAFSQSYD--IESHDYDDLVNTINEINIMDL 828
Query: 788 LPSK 791
P+K
Sbjct: 829 TPAK 832
>gi|169334038|ref|ZP_02861231.1| hypothetical protein ANASTE_00431 [Anaerofustis stercorihominis DSM
17244]
gi|169258755|gb|EDS72721.1| DNA mismatch repair protein MutS [Anaerofustis stercorihominis DSM
17244]
Length = 891
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 189/663 (28%), Positives = 324/663 (48%), Gaps = 82/663 (12%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNK---FLKLDATAHE 181
+E+ VR++G LL L+ QK A I I+ E+ +N+ ++ LD
Sbjct: 232 NNEIIVRSAGALLKYLDET-------QKR---ALIHIN---EIKINEDKDYMHLDYNTKR 278
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
L+I + ++ K+ ++ +++ VT MG R L+ W L P+ + + + R +
Sbjct: 279 NLEIVE------NLRTNNKKD--TLLDVLDNTVTSMGARELKKWVLEPLTNKDKIILRQD 330
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
AI F+ ++ + LKYVKD+ I+ + + I D A +SI
Sbjct: 331 AIKLFIDDVMILEDITSNLKYVKDMERIISRLSLD--IANGRDLLALKESI--------- 379
Query: 302 FEVGISESLREQL-RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
G+ +R L +L+ + EL+ +Y+L+ ID + G +V+
Sbjct: 380 ---GVIPRIRILLSKLMKSSPLLSEIYTKLDELSDIYDLIESSIDDDCQVSLKNGGIVKL 436
Query: 361 GFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
G+ +E+DEL+ + + L + E + +L I Y GY + +
Sbjct: 437 GYNEEIDELKNLKNNSAQILANIEKDEKEKTGIKNLK-------IKYNKVFGYFLEV--- 486
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
++ L F ++R Y T + ++++ L + K+ + E I D+
Sbjct: 487 ---TSSYASLVPDYFIRKQTLANSER--YFTEELKDIEVKLLSVEEKLKEKEYKIYLDVK 541
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMT 537
+ I + A +D +SLA+VA +N+Y++P +T + I+ GRH V++++T
Sbjct: 542 NRILENIKRIQVTAKMIAVIDAVISLAIVAKKNHYVKPTITENGSIIIKEGRHPVVEKIT 601
Query: 538 -VDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
+D FI NDT +DN D RI IITG N +GKS YI+QVALI ++ IGSFVPA +A++ +
Sbjct: 602 GLDNFIHNDTLLDNEDNRILIITGANMAGKSTYIRQVALISIMAQIGSFVPATSASISIV 661
Query: 596 D--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D S + + QS+FM+++ +V +L+ AT SL +LDE G+GT T DG+ +
Sbjct: 662 DRVFTRVGASDDLASGQSTFMVEMSEVSNILKYATKNSLVILDEVGRGTSTFDGLSIAHA 721
Query: 648 TINYFV-TCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
I Y + + K L TH LTEL EG + +K Y+ +R E+N ++IV
Sbjct: 722 VIEYLLDKSKIGAKTLFATHYHELTEL--EG---EQNGVKNYS---IRLESNG---DEIV 770
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQY 763
FL ++ G SYG+ LAG+P EVIKR+ +L+ + N+ + + ++A +
Sbjct: 771 FLRKIERGGIDKSYGIEVGKLAGLPDEVIKRSMQILDVLEENEETYKSKIDAMNAHIRMN 830
Query: 764 KNA 766
N+
Sbjct: 831 SNS 833
>gi|164688070|ref|ZP_02212098.1| hypothetical protein CLOBAR_01715 [Clostridium bartlettii DSM
16795]
gi|164602483|gb|EDQ95948.1| DNA mismatch repair protein MutS [Clostridium bartlettii DSM 16795]
Length = 957
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 291/593 (49%), Gaps = 70/593 (11%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ LD L++ +T I K+ S+ +++K T MG R+LR + P++
Sbjct: 264 YMVLDMFTRSNLELTET--------IRTKKKKGSLLHVLDKTSTAMGGRMLRKYVEEPLV 315
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + + +RL+ I L L E LK V DI I K T + S
Sbjct: 316 DKKRIQNRLDVIEEIKDDYSLRIDLIEILKNVYDIERICGKIAFEKV--TPKELINLKNS 373
Query: 292 ICSLLHVNKIFEVGISESLRE---QLRLLN--FDIVEKAASCITTELAYVYELVIGIIDV 346
I L + + E +E L+ ++ L+ +D++++A + E I I D
Sbjct: 374 IEKLPELKRRIEDSDAEILKNYAGKMETLDDIYDLIDRAI---------LPEPSITIKD- 423
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G +++ + +EL ELR++ ++E+ + E + K + I +
Sbjct: 424 --------GNIIQSSYNEELRELREVSTNGAFMIKEIENREKEKTG--VKSL---KIGFN 470
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + I + L ++ + S+ + Y T + + +++ + KI
Sbjct: 471 KVFGYYIEITKANLATANIDDSYIRKQTLSNAER------YITEELKIIEDKILHAKEKI 524
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+E + + +I D + A +D F S A VA NNY++P + LDI
Sbjct: 525 GVLEYELFVQVRKYIYDNIDRIQNVAKIIANIDVFTSFATVADLNNYVKPNINDNNKLDI 584
Query: 527 QNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+NGRH + E V + F+PNDT + D++ INIITGPN +GKS Y++Q A+IV ++H+GS
Sbjct: 585 KNGRHPVVENIVGEENFVPNDTYLSDDENIINIITGPNMAGKSTYMRQSAIIVLMAHMGS 644
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD A + + D S +++ QS+FM+++++V +L+ ATS+S +LDE G+G
Sbjct: 645 FVPADFADIPICDRIFTRVGASDDLSSGQSTFMVEMNEVSQILKNATSKSFVILDEIGRG 704
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRP 692
T T DGI L + Y + ++ K L TH LT+L NE +K Y++SV
Sbjct: 705 TSTYDGISLAWAIVEY-IQSNIKCKTLFATHYHELTDLENE-----FREVKNYSISV--- 755
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
D E+I+FL ++V A SYG++ A LA +P +VI+R++ +L + N
Sbjct: 756 ---KDDGENIIFLRKIVEQPADKSYGIYVAKLAKLPDQVIERSSEILSDLEKN 805
>gi|389575732|ref|ZP_10165760.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
gi|389311217|gb|EIM56150.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
Length = 878
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 167/616 (27%), Positives = 287/616 (46%), Gaps = 71/616 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++++ LD++ L++ +T + G S+ G++++ T MG R+LR++ +P
Sbjct: 263 DRYMLLDSSTRRNLELVETLREKQKRG--------SLLGVLDRTKTAMGARMLRSFVEQP 314
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+++ + + RL A+ + + + E L+ V D+ + + S D AF
Sbjct: 315 LINKDEIEKRLTAVEELVKMPMIRDEIREYLQPVYDLERLASRITYQS--ANPRDLIAFK 372
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ L + ++ E +RE N D +E +Y+ V I +
Sbjct: 373 TSLEMLPFIRQLLSGFEGEQIREIRE--NLDPLED-----------LYDAVQAAIIDDPP 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G ++R+G+ + +D R+ + ++L ++ + E + K + V Y
Sbjct: 420 LAMKEGGIIRDGYNEMVDSFREAKKNGQKWLSDLEAEEREKTG--IKTLRVK---YSRVF 474
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
GY + + D E ++ S+ Y T + +E++ + ++ +
Sbjct: 475 GYCIEVTNSFKDKVPEEYMRKQTLTGSER--------YTTVRLKEIEEQIVGAEDRLGSL 526
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + ++ + I + K A LD F S A ++ +N Y+RP L LDI+ G
Sbjct: 527 EYELFSEVRNTIAQNVARVQKTAQAIAALDVFCSFAYISERNRYVRPKLNKSGKLDIKEG 586
Query: 530 RHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
RH + E + D FI NDT +D ND R+ +ITGPN +GKS Y++Q ALIV ++ IG FVP
Sbjct: 587 RHPVVERMIPDDLFIANDTYLDQNDHRVAVITGPNMAGKSTYMRQSALIVLMAQIGCFVP 646
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A +G+ D S + + QS+FM+++ +V +LR AT SL +LDE G+GT T
Sbjct: 647 AASANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATGNSLLILDEIGRGTST 706
Query: 639 EDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
DG+ + + T + K L TH EL EG K + Y ++V
Sbjct: 707 FDGLAIAWAVTEFVADTKKIGAKTLFATHYHELTELEG---KIAGVHNYCIAV------K 757
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA-------------AYVLEAAQ 743
+DIVFL ++V G A SYG+ A LAGVP V+ RA A V + A
Sbjct: 758 EKGDDIVFLRKIVQGGADKSYGIQVARLAGVPEPVLARAKDLVEQLSKADITAAVSDIAS 817
Query: 744 NNKHVERWSHENISAQ 759
K V++ ++ + Q
Sbjct: 818 TKKKVKKTHYDTVDMQ 833
>gi|342218674|ref|ZP_08711282.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
gi|341589370|gb|EGS32651.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
Length = 865
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 172/635 (27%), Positives = 296/635 (46%), Gaps = 75/635 (11%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
+I + K L LDA + L++ Q + G ++ +++ T MG RLLR
Sbjct: 259 LIAIDYTKQLVLDAASLRHLEVTQNVRDGGRKG--------TLLEVLDHTQTAMGGRLLR 310
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
W P+L + ++ R ++++ + L L L + D IL + +
Sbjct: 311 KWLESPLLSIGDITYRQDSVAELVQKVTLRQDLVNILSRIFDFERILTRIEIGTV--NPK 368
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY---VYELV 340
D A +S+ +L + + S L++ + T+++ +Y L+
Sbjct: 369 DMVALRESLAALPAIKQYLAQAQSRMLKQ----------------LATQISVHDDMYTLL 412
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ I+ N G ++R GF ELDE+R++ + L+E+ + E + K
Sbjct: 413 MRGINDNPGTVLRNGGVIRSGFSAELDEIRRLAADSQTILQELEATERERTGIKMK---- 468
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I Y GY FE + + + + + + Y TP +E + +
Sbjct: 469 --IGYTKVFGYY---FE--ISHANTKPIPDYYVRKQTLVNAER---YITPDLKEFEVKVL 518
Query: 461 DIYHKILDMERA----ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
++L +E A I DL I + A++DC +SLA+ A + Y+RP
Sbjct: 519 TAQERMLALETALFATIREDLQQQIAAMQE----TARALAQVDCLVSLAVAAQKYRYIRP 574
Query: 517 ILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVA 573
L E + I++GRH + E + + F+PND +++ ND I ++TGPN +GKS Y++QVA
Sbjct: 575 QLNTERTILIRDGRHPIIERFLKSEVFVPNDVQLNHNDHEILVLTGPNMAGKSTYMRQVA 634
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
++V ++ IG+F+PA A++ D S + QS+FM+++ +V +L+ AT S
Sbjct: 635 VLVLMTQIGAFIPAKEASICPVDRIFTRIGASDDILTGQSTFMVEMKEVAYILKHATMNS 694
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L + DE G+GT T DG+ + I Y V V L TH EL++ K+ ++K Y
Sbjct: 695 LLIFDEIGRGTSTFDGMSIARAVIEY-VESKVHALTLFATHYHELIDMS--DKTTKIKNY 751
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAA 742
T++V +DI FL R++ G A SYGLH A LAGVP ++ RA + LEAA
Sbjct: 752 TVAV------KERGKDITFLRRIIAGGADRSYGLHVARLAGVPESLLSRAEVILKDLEAA 805
Query: 743 QNNKHVERWSHENISAQDQQYKNA-VEKMLAFDVL 776
+ S E + + N ++ +++ DV+
Sbjct: 806 ETRPCRVAASKEVVERNIDLFTNPIIDALVSVDVM 840
>gi|194334404|ref|YP_002016264.1| DNA mismatch repair protein MutS [Prosthecochloris aestuarii DSM
271]
gi|194312222|gb|ACF46617.1| DNA mismatch repair protein MutS [Prosthecochloris aestuarii DSM
271]
Length = 875
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 170/604 (28%), Positives = 274/604 (45%), Gaps = 70/604 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I + V ++++ LD L+I + S G S+ ++++ PMG R
Sbjct: 266 ITRIATVDSHEYMTLDLQTRRNLEIIFSMHDGSMNG--------SLLHVIDRTRCPMGAR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LR W L P+ + + R +A+ ++ L E + + D+ L +
Sbjct: 318 QLRRWLLHPLKQMAPILQRHDAVDELSRHPDVRRELGEVIGSIHDLERALSRI------- 370
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASC-ITTELAYVY 337
A L+S+ EV + S EQL L FD E + C ++ L+ +
Sbjct: 371 ------ATLRSMPR--------EVRMLGSALEQLPRLQGLFDQSESSRLCFLSRRLSMLP 416
Query: 338 ELVIGI---IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL 394
EL I ID + G +REG+ ELD LR + E L LE+ Q
Sbjct: 417 ELARRIDEAIDPDAGATMRDGGYIREGYNAELDSLRSLSSTAKERL-----LEIQQQERA 471
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+ + Y GY + + D +E + ++ E Y P +E
Sbjct: 472 ATTISTLKVQYNKVFGYYIEVSRANSDKVPAY----YEKKQTLVNAER----YTIPALKE 523
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
+ + K L +E+ + R+L I + + AELDC S A+ A + Y
Sbjct: 524 YEETILTAEEKSLSLEQRLFRELCQAIASEAGQIQTNAESIAELDCLCSFAVNADEYRYC 583
Query: 515 RPILTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDNDGRINIITGPNYSGKSIYIKQ 571
+P++ EP+L IQNGRH + E VD ++ ND D R+ I+TGPN +GKS Y++Q
Sbjct: 584 KPVMVEEPVLRIQNGRHPVLERIVDVDEPYVSNDCLFDERQRMLIVTGPNMAGKSSYLRQ 643
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
+ LI L+ +GSFVPAD A +GL D S ++ + +S+FM+++++ +L AT
Sbjct: 644 IGLISLLAQVGSFVPADEAEIGLVDRIFTRVGASDNLASGESTFMVEMNEAASILNNATR 703
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK 683
SL LLDE G+GT T DG+ + ++ ++ + + L TH EL ERL
Sbjct: 704 SSLILLDEVGRGTSTYDGMS-IAWAMSEYIHSAIGARTLFATHYHELAE-----LEERLD 757
Query: 684 FYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
V T+ D +VFL ++V G + SYG+ A +AG+P+ VI+RA +L
Sbjct: 758 ----GVFNYNATVTETADRVVFLRKIVRGASDNSYGIEVARMAGMPSGVIQRAKEILSGM 813
Query: 743 QNNK 746
+ +
Sbjct: 814 EGRE 817
>gi|167754512|ref|ZP_02426639.1| hypothetical protein CLORAM_00013 [Clostridium ramosum DSM 1402]
gi|167705344|gb|EDS19923.1| DNA mismatch repair protein MutS [Clostridium ramosum DSM 1402]
Length = 836
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 289/616 (46%), Gaps = 53/616 (8%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E++ ++++D +AL++ + K G S+F ++++ T MG R+L+ W
Sbjct: 238 EINNEDYVRMDLYTKKALELTSSAKSNDKYG--------SLFWLLDQTKTAMGSRMLKQW 289
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP+++ E + RL+ + F S+ E LK + D+ + + + A D
Sbjct: 290 IERPLINQEQIEERLDIVEIFTNHFIQRESIKEILKDIYDLERLSSRIAFGNI--NARD- 346
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
LK I S L V L+ QL L+ ++ A T +L+++ L+ I
Sbjct: 347 ---LKWISSSLKV--------VPELKNQLLSLDEPLISALADHFT-DLSHITNLIDQAIV 394
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
N G L++EGF +ELDELR I + ++L + E + K + V Y
Sbjct: 395 DNPPLTVKEGNLIKEGFNEELDELRYIRDHGKQWLAQFEQNERDKTG--IKGLKVG---Y 449
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + L L EF ++ + + TP+ +E+++ L K
Sbjct: 450 NRVFGYYIEVTKGNL------SLVKDEFNYTRKQSLSNAERFVTPELKEMESKLLSAQDK 503
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
++ +E A+ ++ ++I + A++D F SLA+++ +N+Y+RP +
Sbjct: 504 MIKLEYALFTEIRNYIKKDVHAIQDVAKIIAKIDVFQSLAMISSENSYVRPTFNHNKVFK 563
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ +GRH + E M T++ ND ID + +ITGPN GKS Y++ +ALI + IG
Sbjct: 564 VVDGRHGVIERVMAQGTYVSNDVNIDAANPVMLITGPNMGGKSTYMRTIALIALMGQIGC 623
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVP A + + D S + + QS+FM+++ + LR AT SL + DE G+G
Sbjct: 624 FVPCSEACIPIFDQIFTRIGASDDLISGQSTFMVEMLEANNALRFATENSLIIFDEIGRG 683
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T T DG+ + I Y + + L TH EL + + L + +
Sbjct: 684 TATFDGMAIAQAMIEY-IAAKIKCITLFSTHYHEL----TFLEEKNLGIKNVHA----SA 734
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
S + +D+VFLYR+ PG + SYG++ A LA +P V+ RA +LEA + N S +
Sbjct: 735 SIENDDLVFLYRIKPGRSNKSYGVNVAKLAKLPDAVLNRANVLLEALEENNIEHHLSDDT 794
Query: 756 ISAQDQQYKNAVEKML 771
+ + VEK L
Sbjct: 795 LKEAPPVTVSVVEKYL 810
>gi|373108709|ref|ZP_09522991.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|423129619|ref|ZP_17117294.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
gi|371646826|gb|EHO12337.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|371648279|gb|EHO13769.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
Length = 865
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 171/603 (28%), Positives = 286/603 (47%), Gaps = 80/603 (13%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
++ +++K ++PMG RLL+ W P+ D + + R N + + EL+ +K
Sbjct: 288 AITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIVEILKENSELLTLFQTQIKK 347
Query: 263 VKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
+ D+ ++ K SP + +D S+ +++ + + + ++SL++
Sbjct: 348 ISDLERLISKIATGKVSPRELIYLND------SLDAIIPIKETAQKSSNDSLKQ------ 395
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
+ K C EL + E + G I + G + EG ELDELR+I E
Sbjct: 396 --MGNKLHGC---EL--LREKIRGTISEDAPVAIAKGNAIAEGVHPELDELRKISTSGKE 448
Query: 379 FLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
LE E+ E +P L I + + GY + + + E ++ +
Sbjct: 449 LLEAMEIRESEKTGIPSLK-------ISFNNVFGYYIEVRNTHKNKVPAEWIRKQTLVNA 501
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ Y T + +E + + KI +E + V+ + + N A
Sbjct: 502 ER--------YITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIA 553
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDN-DG 552
+LDC S A A +NNY+RP++ LDI++GRH + +++ DT +I ND ++N +
Sbjct: 554 QLDCLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVYLNNKEQ 613
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPA +G D S +++ +
Sbjct: 614 QIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISMGE 673
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++++ +L + +SL LLDE G+GT T DGI + Y PK L
Sbjct: 674 STFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTLFA 733
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + +K Y +SV ++N ++FL +LVPG + S+G+H A +
Sbjct: 734 THYHEL--NDMSQNFDGIKNYNVSVKELKDN------VLFLRKLVPGGSAHSFGIHVAKM 785
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFF 784
AG+P V+KRA +L K +E+ H A+DQQ AVE DL+L F
Sbjct: 786 AGMPTTVLKRAEKML------KQLEK-GH----AKDQQPLKAVE---------NDLQLSF 825
Query: 785 QDL 787
+L
Sbjct: 826 FNL 828
>gi|87310334|ref|ZP_01092464.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87286833|gb|EAQ78737.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 873
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 172/642 (26%), Positives = 310/642 (48%), Gaps = 68/642 (10%)
Query: 137 LAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMG 196
LAV +++ LE+ + + + I+ + + L++D +L++ +T M
Sbjct: 230 LAVCAAGAVLEYLEETQR-TSLLHIERLTPYRASSTLEIDEATRRSLELTRT------MR 282
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
GR ++G S+ +++CVT MG RLL +W P+ DLE ++ RL+ + + L L
Sbjct: 283 DGR-RDG-SLLAAIDRCVTVMGSRLLGDWLSNPLTDLEEIHRRLDGVEELVLEPALARDL 340
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E+LK V D+ +L + + T L IC L ++ + + R L
Sbjct: 341 RESLKEVYDLERLLAR------VMTGRASPRDLGYICKTLE--RLPHIKAKITSRRSSML 392
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+ S I ++LA + + + + G ++ GF +LD LR +
Sbjct: 393 RLLEERLDLCSEIRSQLAEALDDSLPLSPRD-------GGVICTGFNADLDHLRGLAAGG 445
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAF 435
+++ E E+ + V +++ GY + + + + ++
Sbjct: 446 KQWIAEYQKQEIE------RTGIANLKVGFNKVFGYYLEVTNVNRERIPTDYIRKQTLKN 499
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y TP+ +E + + K D+E + L + L + + + +
Sbjct: 500 AER--------YITPELKEYEEKVLSADEKAKDLEYELFGQLRDAVQLDAKRIQQTADVL 551
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDND-G 552
A LDC LSLA +A + NY RP + +L I +GRH + ++ F+PND ++D++ G
Sbjct: 552 ANLDCLLSLAELARERNYCRPQVGESAVLRILDGRHPVLDLKEIEGGFVPNDAQLDSESG 611
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
I +ITGPN +GKS YI+QVALI ++ +GSFVPA A +G+ D S ++ Q
Sbjct: 612 FIGLITGPNMAGKSTYIRQVALISLMAQMGSFVPAREADLGIVDRIFARVGASDELSRGQ 671
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF---VTCDVPPKV 661
S+FM+++ + +L AT++SL +LDE G+GT T DG+ L + Y + C +
Sbjct: 672 STFMVEMTETARILNTATNRSLVILDEIGRGTSTYDGVSLAWSIVEYLHDKIGC----RT 727
Query: 662 LVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH EL + LP ++V E + + ++FL+++VPG A SYG++
Sbjct: 728 LFATHYHELTDLRSSLP-----GVVNLNVAVKEWD----DKVIFLHKIVPGAADKSYGIY 778
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQ 762
A LAGVP EV +RA +L + ++H++ + I+++ ++
Sbjct: 779 VARLAGVPREVNERAKQILNQLE-SEHLDSGGNAKIASKKER 819
>gi|423328882|ref|ZP_17306689.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
gi|404604113|gb|EKB03753.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
Length = 865
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 285/603 (47%), Gaps = 80/603 (13%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
++ +++K ++PMG RLL+ W P+ D + + R N + + EL+ +K
Sbjct: 288 AITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIVEILKENSELLTLFQTQIKK 347
Query: 263 VKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
+ D+ ++ K SP + +D S+ +++ + + + ++SL++ L+
Sbjct: 348 ISDLERLISKIATGKVSPRELIYLND------SLDAIIPIKETAQKSSNDSLKQMGNTLH 401
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
C EL + E + G I + G + EG ELDELR+I E
Sbjct: 402 --------GC---EL--LREKIRGTISEDAPVAIAKGNAIAEGVHPELDELRKISTSGKE 448
Query: 379 FLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
LE E+ E +P L I + + GY + + + E ++ +
Sbjct: 449 LLEAMEIRESEKTGIPSLK-------ISFNNVFGYYIEVRNTHKNKVPTEWIRKQTLVNA 501
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ Y T + +E + + KI +E + V+ + + N A
Sbjct: 502 ER--------YITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIA 553
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDN-DG 552
+LDC S A A +NNY+RP++ LDI++GRH + +++ DT +I ND ++N +
Sbjct: 554 QLDCLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVYLNNKEQ 613
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPA +G D S +++ +
Sbjct: 614 QIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISMGE 673
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++++ +L + +SL LLDE G+GT T DGI + Y PK L
Sbjct: 674 STFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTLFA 733
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + +K Y +SV ++N ++FL +LVPG + S+G+H A +
Sbjct: 734 THYHEL--NDMSQNFDGIKNYNVSVKELKDN------VLFLRKLVPGGSAHSFGIHVAKM 785
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFF 784
AG+P V+KRA +L K +E+ A+DQQ AVE DL+L F
Sbjct: 786 AGMPTTVLKRAEKML------KQLEKG-----HAKDQQPLKAVE---------NDLQLSF 825
Query: 785 QDL 787
+L
Sbjct: 826 FNL 828
>gi|261749536|ref|YP_003257222.1| DNA mismatch repair protein MutS [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497629|gb|ACX84079.1| putative DNA mismatch repair protein MutS [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 840
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 190/759 (25%), Positives = 352/759 (46%), Gaps = 100/759 (13%)
Query: 14 VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRSDG 73
+G+S+ D S + ++E +++ L+ +K+ +II+ + E+ + L ++
Sbjct: 145 LGLSFLDISTGEFFIVEDTKEN-----LLHYLKHFNPSEIIFQ--RKEKKYFEELFQNKY 197
Query: 74 TTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRAS 133
T L++ +F+Y A+ +LI T G I++ + +G + AS
Sbjct: 198 YTS-----LMEDWMFNYPFAYEKLISHFQTNSLKGFGIED--------LKLG----IIAS 240
Query: 134 GGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS 193
G +L+ L DT K I ++ + + + +D + L+IF
Sbjct: 241 GVILSYL-----YDTQHYKIKH-----ISNIKRIKKEEHMWIDDFTFQNLEIFH------ 284
Query: 194 HMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELM 253
G K+G S+ ++++ +TPMG RLL++W P++++ ++ R + + +
Sbjct: 285 ----GLNKQGVSLIDIIDQTLTPMGSRLLKHWIYFPLINILSIQRRHQIVEELFSNISIR 340
Query: 254 ASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
+ + LK + DI ++ K SP I T KS+ ++ + KIF
Sbjct: 341 DFIQKKLKEIYDIERMISKMAIGKISPREIITLH------KSLTAIYEIQKIF------- 387
Query: 310 LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDEL 369
L +Q ++L ++ +C + + + I + G ++ +GF ELD++
Sbjct: 388 LSQQSKIL-LELGNSFQNC-----HIISKKITETIHPDPPNHIEKGNVIVKGFSQELDKI 441
Query: 370 RQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQ 429
R +Y E+LE++ S+E L + I Y + GY + K ++
Sbjct: 442 RFLYFSKKEYLEKLRSIEQSNTGILNLK-----IGYNNIFGYFFEVKSTKKHKIPSHWIR 496
Query: 430 GFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLL 489
S+ Y T + + + + + KI +E+ I +L++ + + L
Sbjct: 497 KQTLTNSER--------YTTEELKNYELQILNSEQKIFSLEKEIFHNLINKLLKYIKPLQ 548
Query: 490 KAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL---QEMTVDTFIPNDT 546
K A+LD S ++ A +NNY++P + L I+ GRH + Q ++ ++IPND
Sbjct: 549 KNAKIIAKLDVLCSFSISALENNYVKPEINHSFELCIKKGRHPVIERQFISKISYIPNDL 608
Query: 547 RIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------S 597
++ D +I IITGPN SGKS ++Q A+I+ ++HIGSFVPA A +GL D S
Sbjct: 609 FLNKTDQQIMIITGPNMSGKSAILRQTAIIILMAHIGSFVPAQYAKMGLVDKIFSRVGAS 668
Query: 598 KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV 657
+++ +S+FM+++++ +L + +S +LDE G+GT T DGI L + +
Sbjct: 669 DNISLGESTFMVEMNETANILNNLSKRSFLILDEIGRGTSTYDGISLAWSIVEFLHENSF 728
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
P L TH EL K R++ Y +SV + E+I+F+ L+ G + S+
Sbjct: 729 RPLTLFATHYHELNKMSSFFK--RIQNYHISVKKIN------ENIIFMRTLIDGGSEHSF 780
Query: 718 GLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENI 756
G+H A ++G+P VI RA +L+ V + H I
Sbjct: 781 GIHVAKISGMPTRVIHRAKEILKTLDKKNQVFQEEHPKI 819
>gi|430747225|ref|YP_007206354.1| DNA mismatch repair protein MutS [Singulisphaera acidiphila DSM
18658]
gi|430018945|gb|AGA30659.1| DNA mismatch repair protein MutS [Singulisphaera acidiphila DSM
18658]
Length = 865
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 175/589 (29%), Positives = 278/589 (47%), Gaps = 78/589 (13%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
L LD +L++ +T + K S+ ++++ TPMG RLL +W P+
Sbjct: 266 LALDEMTRRSLELTRTLRD--------GKRDGSLLQVIDRSCTPMGARLLADWLTSPLTH 317
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
LE + R A+ L L + L +L D+ + + + T D A +++
Sbjct: 318 LEPIAERHEAVGELLGDSLLRSDLRSSLGQAYDLERLAARVGTGR--ATPRDLAALARTL 375
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEK 352
L + S+ L QL ++ + S I L L I KE
Sbjct: 376 ALLPKIRARLTARSSKRL-NQLEA-ALELCPEVRSAIEAALVDDPPLTI--------KEG 425
Query: 353 GYGTLVREGFCDELDELRQIYEELPEFL-----EEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+REG+ +LDELR+I ++ E+V + L ++F
Sbjct: 426 G---LIREGYHPDLDELREIARGGKSWIAKFQSEQVRRTGIANLKVGFNKVF-------- 474
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF--YHTPKTRELDNLLGDIYHK 465
GY + I QG + + +T + Y TP+ +E ++ + +
Sbjct: 475 --GYYIEI----------SHAQGSKVPPDFIRKQTVKNAERYITPELKEYEDKVLRAEDR 522
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
++E + L + + L++A A++D +LA +A ++ Y RP + EP L+
Sbjct: 523 ANELEYELFTTLRDRVAAEAPRLIQAGAVLAQVDVLSALAELAARHGYCRPEMVAEPALE 582
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I+ GRH + + M F+PNDTR+ NDG I +ITGPN +GKS +I+QVAL+ L+ IG
Sbjct: 583 IEVGRHPVLDVLMPPGDFVPNDTRLSPNDGTIVVITGPNMAGKSTFIRQVALLTILAQIG 642
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA A +G+ D + ++ QS+FM+++ + +L AT+ SL +LDE G+
Sbjct: 643 SFVPARRARIGVVDRLFARVGATDELSRGQSTFMVEMTETANILNNATAHSLVILDEIGR 702
Query: 635 GTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVL 690
GT T DGI L + V C + L TH EL+ E P RL+ ++V
Sbjct: 703 GTSTFDGISLAWAITEHLHDVVGC----RTLFATHYHELVELEKTKP---RLRNANVAVR 755
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
E +IVFL+R+VPG A SYG+H A LAGVPA V++R+ +L
Sbjct: 756 ESEG------EIVFLHRIVPGGADQSYGIHVARLAGVPAPVLERSREIL 798
>gi|423133284|ref|ZP_17120931.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
gi|371649340|gb|EHO14821.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
Length = 865
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 285/603 (47%), Gaps = 80/603 (13%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
++ +++K ++PMG RLL+ W P+ D + + R N + + EL+ +K
Sbjct: 288 AITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIVEILKENSELLTLFQTQIKK 347
Query: 263 VKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
+ D+ ++ K SP + +D S+ +++ + + + ++SL++ L+
Sbjct: 348 ISDLERLISKIATGKVSPRELIYLND------SLDAIIPIKETAQKSSNDSLKQMGNTLH 401
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
C EL + E + G I + G + EG ELDELR+I E
Sbjct: 402 --------GC---EL--LREKIRGTISEDAPVAIAKGNAIAEGVHPELDELRKISTSGKE 448
Query: 379 FLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
LE E+ E +P L I + + GY + + + E ++ +
Sbjct: 449 LLEAMEIRESEKTGIPSLK-------ISFNNVFGYYIEVRNTHKNKVPTEWIRKQTLVNA 501
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ Y T + +E + + KI +E + V+ + + N A
Sbjct: 502 ER--------YITEELKEYETKILGAEEKIYKLENELFEQFVAWCAQYIKPVQLNANLIA 553
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDN-DG 552
+LDC S A A +NNY+RP++ LDI++GRH + +++ DT +I ND ++N +
Sbjct: 554 QLDCLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVYLNNKEQ 613
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPA +G D S +++ +
Sbjct: 614 QIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASDNISMGE 673
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++++ +L + +SL LLDE G+GT T DGI + Y PK L
Sbjct: 674 STFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHQHPGKPKTLFA 733
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + +K Y +SV ++N ++FL +LVPG + S+G+H A +
Sbjct: 734 THYHEL--NDMSQNFDGIKNYNVSVKELKDN------VLFLRKLVPGGSAHSFGIHVAKM 785
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDLRLFF 784
AG+P V+KRA +L K +E+ A+DQQ AVE DL+L F
Sbjct: 786 AGMPTTVLKRAEKML------KQLEKG-----HAKDQQPLKAVE---------NDLQLSF 825
Query: 785 QDL 787
+L
Sbjct: 826 FNL 828
>gi|325110084|ref|YP_004271152.1| DNA mismatch repair protein MutS [Planctomyces brasiliensis DSM
5305]
gi|324970352|gb|ADY61130.1| DNA mismatch repair protein MutS [Planctomyces brasiliensis DSM
5305]
Length = 925
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 200/792 (25%), Positives = 346/792 (43%), Gaps = 123/792 (15%)
Query: 4 YMACI-LHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+A + L+ G+++ + S + + EV D+ SD ++ + +I + +E
Sbjct: 173 YLAAVCLYKKTAGLAWLELSTGRFQLAEVDPDNLSD----ELSRLHPAELLINQEQRDDE 228
Query: 63 SFLSALKRSDGTTEAPTVKLVKSSIFSY--EQAWHRLI-YLRVTGMDDGLSIKERICYLN 119
SA + P + + + +S+ EQ + +L + RV ++ G I+
Sbjct: 229 RLASA------SLALPHMLMTERPPWSFAGEQPYEQLCKHFRVRSLE-GFDIE------- 274
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
G V A+G LL + Q+ A I + S + L +D
Sbjct: 275 -----GPSTAVTAAGVLLEYV----------QETQRTAIDHIRRIEPYSPEERLLIDEAT 319
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
+L++ T + G ++ ++++ VT MG RL+ W P+ + +++ R
Sbjct: 320 RRSLELTHTLREGKRQG--------TLLDVIDETVTAMGARLIGEWISNPLTNRQHITRR 371
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVN 299
+A+ + + L+ E L D+ + + + + D T K++ L
Sbjct: 372 ADAVEELVGNPLLLNEFREQLDNTYDLQRLATRVATGRC--SPRDLTWLAKTLSLLPATK 429
Query: 300 KIFEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
K + L E +LL+ D+ +SC+ V + I + D G L
Sbjct: 430 KSLSQCQAARLHELHQLLDECEDVCADISSCL------VEDPPINVAD---------GDL 474
Query: 358 VREGFCDELDELRQIYEELPEFL-----EEVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
VR G+ D LDELR + E++ EE+ + L ++F GY
Sbjct: 475 VRAGYNDRLDELRDLSRGGKEWIARYQAEEIERTGIQNLKVGFNKVF----------GYY 524
Query: 413 MCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
+ + T Q Q + + + TP+ +E + + + L +E
Sbjct: 525 L--------EVTAAQAQKVPEDYIRKQTLKNQERFITPQLKEHEEKVLSADQQSLALETE 576
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHV 532
I + L + L ++ AELD S A A N++ RP+LT P+L + +GRH
Sbjct: 577 IFQQLRERVADQLQRLQQSAETLAELDVLGSFAHTAANNDFCRPVLTESPVLRVVDGRHP 636
Query: 533 LQE--MTVDTFIPND--------------TRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + + F+PND + + + GR+ IITGPN +GKS YI+Q AL+
Sbjct: 637 VLDHILPRGQFVPNDIHLGQPEKAEADEESTLPDAGRVQIITGPNMAGKSTYIRQAALVT 696
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
L+ GSFVPA ATVGL D S ++ QS+FM+++ + +L AT++SL +
Sbjct: 697 LLAQAGSFVPAREATVGLVDRIFARVGASDELSKGQSTFMVEMTETARILNTATNRSLVI 756
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
LDE G+GT T DG+ L Y + + L TH EL E L ++ + +
Sbjct: 757 LDEIGRGTSTYDGLSLAWAVTEYLHDT-IGARTLFATHYHELTELEQTLSA---VRNWNV 812
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
SV + D++FL+++VPG A SYG+H A LAGVP +V++RA +L +++ H
Sbjct: 813 SVYEKDG------DVIFLHKIVPGAADRSYGIHVARLAGVPTDVLRRAGEILSTLESD-H 865
Query: 748 VERWSHENISAQ 759
V+ I +
Sbjct: 866 VDETGKPTIPPR 877
>gi|352684318|ref|YP_004896303.1| DNA mismatch repair protein MutS [Acidaminococcus intestini
RyC-MR95]
gi|350278973|gb|AEQ22163.1| DNA mismatch repair protein MutS [Acidaminococcus intestini
RyC-MR95]
Length = 871
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 292/598 (48%), Gaps = 70/598 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
++ + E++ ++ + LDATA L++ + K + G ++ +++ T MG R
Sbjct: 254 LNRLTEITTDRTMVLDATAIRNLELVRNMKDGTKKG--------TLLDILDYTATAMGAR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+R W P+ D + SR A+ + L L E LK + D+ IL + S
Sbjct: 306 LMRQWIESPLYDAARITSRQQAVGTLVGDSRLRTELGEALKKITDLERILSRIEVGS--A 363
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D + ++ ++ + ++ R+ L + K +S I + + EL
Sbjct: 364 NARDMASLRTALLAVPDLKRLLA-----PYRDGL-------LAKLSSRIDSHETVLDELR 411
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEM 398
GI+D + G ++R+G+ ELDEL I E +++ E+ E + +L K
Sbjct: 412 RGIVD-DPPFTVREGGMIRKGYNAELDELHDIAENNNAWMQDFELRIKEETGIKNL-KVG 469
Query: 399 FVPCIVYIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
F Y ++ G + + + + TL ++GE Y P+ + +
Sbjct: 470 FNKVFGYYIEVSKGQVSQVPDSFIRKQTL------------VNGER----YIVPELKAFE 513
Query: 457 NLLGDIYHKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
N + KI +E + RD V + +A+ ELD SLA+ A + NY
Sbjct: 514 NKILSAKEKIQQLEYYLFNEIRDCVRDELVTIQDTARAI---GELDAIYSLAMAAFKGNY 570
Query: 514 MRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIK 570
+ P L+ + + I++GRH + E + + F+PND ++ + R+ I+TGPN +GKS Y++
Sbjct: 571 VCPRLSDKGEIIIKDGRHPVVEKLLERELFVPNDVHLNGTNERLIILTGPNMAGKSTYMR 630
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
QVAL+V ++ +GSF+P A + D S + QS+FM+++++V +L+ AT
Sbjct: 631 QVALLVLMTQMGSFLPCREAVITPVDRIFTRVGASDDLATGQSTFMVEMNEVANILKNAT 690
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
S+SL +LDE G+GT T DG+ + + Y + + K L TH EL+ L + +
Sbjct: 691 SRSLIILDEVGRGTSTYDGMSIARAVVEY-INEKIKAKTLFATHYHELIELEDL--FDGI 747
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
K Y+++V N D+VFL R+VPG SYG+H A LAG+P +V+ RA +LE
Sbjct: 748 KNYSIAVKEKGN------DVVFLRRIVPGGTDRSYGIHVAKLAGLPKKVLDRADELLE 799
>gi|423342468|ref|ZP_17320182.1| DNA mismatch repair protein mutS [Parabacteroides johnsonii
CL02T12C29]
gi|409217385|gb|EKN10361.1| DNA mismatch repair protein mutS [Parabacteroides johnsonii
CL02T12C29]
Length = 879
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/609 (27%), Positives = 291/609 (47%), Gaps = 63/609 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++++LD +L++ T +EG S+ +++K V+PMG R
Sbjct: 252 ITSLSRIEEDRYVRLDKFTVRSLELVST----------MNEEGTSLLDVLDKTVSPMGSR 301
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W L P+ D++ ++ R + + +F E+ L E L+ + D+ I+ K +
Sbjct: 302 MLRRWILFPLKDVKPIHERQDVVEYFFRHPEVKELLEEKLEQIGDLERIISKV---AVGR 358
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ LK +L + I EV ++ R I E+ +C A + + +
Sbjct: 359 VSPREVVQLK--VALRAIEPIKEVCMASDEPSLCR-----IGEQLNAC-----ALIRDRI 406
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEM 398
I+ + G ++ G ELDELR I ++L +V + +EL + L
Sbjct: 407 EKEINNDPPSLLNRGGVIATGVNAELDELRAIAYSGKDYLLKVQAREIELTGISSLK--- 463
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + + GY + + D E ++ ++ Y T + +E +
Sbjct: 464 ----IGFNNVFGYYIEVRNAYKDKVPAEWIRKQTLVNAER--------YITEELKEYEEK 511
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ KIL +E + +LV + + + N LDC LS A VA N Y+RP +
Sbjct: 512 ILGAEEKILSLEARLFNELVLCLSEYIPPIQMNANLIGRLDCLLSFAKVAEINRYIRPDV 571
Query: 519 TLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVAL 574
++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS ++Q AL
Sbjct: 572 NDSQVIDIKAGRHPVIEKQLPIGEPYIANDVYLDDEKQQIIIITGPNMAGKSALLRQTAL 631
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
I +S IG FVPA+ A +G+ D S +++ +S+FM+++++ +L +S+SL
Sbjct: 632 ITLMSQIGCFVPAECAHIGIVDKIFTRVGASDNISVGESTFMVEMNEASDILNNMSSRSL 691
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L DE G+GT T DGI + + Y K L TH E LNE +R+K Y
Sbjct: 692 VLFDELGRGTSTYDGISIAWAIVEYIHEHPSARAKTLFATHYHE-LNE-METSFKRIKNY 749
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+SV N ++FL +LVPG + S+G+H A +AG+P ++KR+ +L+ +
Sbjct: 750 NVSVKEVNNK------VIFLRKLVPGGSEHSFGIHVAKMAGMPKSIVKRSNEILKQLETE 803
Query: 746 KHVERWSHE 754
E + E
Sbjct: 804 NRQEGIATE 812
>gi|302344788|ref|YP_003813141.1| DNA mismatch repair protein MutS [Prevotella melaninogenica ATCC
25845]
gi|302149251|gb|ADK95513.1| DNA mismatch repair protein MutS [Prevotella melaninogenica ATCC
25845]
Length = 886
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/626 (26%), Positives = 296/626 (47%), Gaps = 82/626 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ +TPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGSSLLNVIDNTITPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + ++E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDEKPINERLDVVDYLFREPDFRECINEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K++C + + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTVCLYTKSDTLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
VN+ G ++ GF ELD+LR I + ++L E+ E+ Q
Sbjct: 434 ------------VNK------GDVIALGFNQELDDLRSIRDNGKQYLLEIQEKEIAQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ I + + GY + + F++K+ + + + + +R Y TP
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPENWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KIL +E + +L+ + F + N A LDC LS V+
Sbjct: 520 ELKEYEEKILGADEKILALETQLYMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQL 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKS 566
Y+RP++ ++DI+ GRH + E + + ++PND +D + +I +ITGPN +GKS
Sbjct: 580 QRYVRPVVDDSEVIDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCL 676
T +SL L DE G+GT T DGI + + Y + L TH EL E
Sbjct: 700 NNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSRAQARTLFATHYHELNEMEKNF 759
Query: 677 PKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
P R+K + +SV + + I+F+ +L G + S+G+H A +AG+P ++KRA
Sbjct: 760 P---RIKNFNVSVKQVDGK------IIFVRKLEKGGSEHSFGIHVAEIAGMPRSIVKRAN 810
Query: 737 YVL-EAAQNNKHVERWSHENISAQDQ 761
+L E ++N V + DQ
Sbjct: 811 VILKELEKDNSQVGSVGKAAVERLDQ 836
>gi|410584485|ref|ZP_11321588.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
gi|410504420|gb|EKP93931.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
Length = 1038
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 281/589 (47%), Gaps = 64/589 (10%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+L ++L +DA + L++ + + S G ++ +++ T MGRRLLR W
Sbjct: 289 ALGQWLAIDANSRRNLELVRRLRDGSRQG--------TLLDVLDLTETAMGRRLLRQWIE 340
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
RP++D +++RL+A+ + L A L + L ++D+P +L + Y ++
Sbjct: 341 RPLVDPAAISARLDAVEALVRDPFLRAGLRQQLAGMQDLPRLLGRVG-----YQQANARD 395
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
L +L + ++ + L R +E + +LA + + G + +
Sbjct: 396 LLGIARALERLPEL-----AAQLEGAARAGPLGRLEAVRQALDPQLAGLAARLRGALVDD 450
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+R+GF E+D LRQ + + +A+LE + + + +
Sbjct: 451 PPTGITEGGLIRDGFHPEVDALRQAMAQGRHW---IAALEARERERTGIKSL--KVGFNK 505
Query: 408 QIGYLMCIFEEKL-----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
GY + + D + L G E + TP+ + +++ +
Sbjct: 506 VFGYFIEVTRANRHLVPPDYERRQTLAGAER-------------FVTPELKAMESRILGA 552
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
++ +E + +L + L + AELD +LA A + Y+RP L +
Sbjct: 553 EERLAALEHQLFLELRQEVAAAIPQLQATADALAELDVLAALAEAAARYGYVRPKLAADR 612
Query: 523 LLDIQNGRHVLQEMTVDT-FIPNDTRIDNDG---RINIITGPNYSGKSIYIKQVALIVFL 578
L I+ GRH + + T++ F+PND ID DG R+ +ITGPN +GKS +++QVALIV +
Sbjct: 613 RLRIKAGRHPVLDRTLEGRFVPND--IDLDGEEERVMLITGPNMAGKSTFMRQVALIVIM 670
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +GSFVPA A +GL D S + + QS+FM+++ + + + AT +SL LLD
Sbjct: 671 AQMGSFVPAAEAEIGLVDRIFCRVGASDDLASGQSTFMVEVAETALAVHHATPRSLILLD 730
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
E G+GT T DGI + I Y + + + LV TH EL G ++ Y V+
Sbjct: 731 EIGRGTSTFDGIAIARAVIEY-IHDRIGARTLVSTHYHELT--GLAATRPGIRNYHARVV 787
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ + I FL+R+ PG A SYG++ A LAG+P E+++RA +L
Sbjct: 788 ------EEGDGIRFLWRIAPGGADRSYGINVARLAGLPVEIVERAKAIL 830
>gi|423723128|ref|ZP_17697281.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL09T00C40]
gi|409241553|gb|EKN34321.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL09T00C40]
Length = 879
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 177/642 (27%), Positives = 302/642 (47%), Gaps = 82/642 (12%)
Query: 137 LAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMG 196
L V+ + I+ L+Q + + S I S+ + +++++LD +L++ T
Sbjct: 229 LGVVASGAILYYLDQTQHTHIS-HITSLSRIEEDRYVRLDKFTVRSLELVST-------- 279
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
+EG S+ +++K V+PMG R+LR W L P+ D++ ++ R + + +F E+ L
Sbjct: 280 --MNEEGTSLLDVLDKTVSPMGSRMLRRWILFPLKDVKPIHERQDVVEYFFRHPEVKELL 337
Query: 257 HETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISES 309
E L+ + D+ I+ K SP + A +K C+ + +G
Sbjct: 338 EEKLEQIGDLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACTASDEPSLCRIG---- 393
Query: 310 LREQLRL--LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
EQL L D +EK + L +NR G ++ G ELD
Sbjct: 394 --EQLNACALIRDRIEKEINNDPPSL------------LNR------GGVIATGVNAELD 433
Query: 368 ELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL 425
ELR I ++L +V + E L + L I + + GY + + D
Sbjct: 434 ELRAIAYSGKDYLLKVQAREIDLTGISSLK-------IGFNNVFGYYIEVRNAYKDKVPA 486
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
E ++ ++ Y T + +E + + KIL +E + +LV + +
Sbjct: 487 EWIRKQTLVNAER--------YITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYI 538
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFI 542
+ N LDC LS A VA N Y+RP + ++DI+ GRH + E + + +I
Sbjct: 539 PPIQMNANLIGRLDCLLSFAKVAESNRYIRPDVNDSQVIDIKAGRHPVIEKQLPIGEPYI 598
Query: 543 PNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
ND +D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA+ A +G+ D
Sbjct: 599 ANDVYLDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTR 658
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + + Y
Sbjct: 659 VGASDNISVGESTFMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIH 718
Query: 654 T-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ K L TH E LNE +R+K Y +SV N ++FL +LVPG
Sbjct: 719 EHPNARAKTLFATHYHE-LNE-MEASFKRIKNYNVSVKEVNNK------VIFLRKLVPGG 770
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
+ S+G+H A +AG+P ++KR+ +L+ + E + E
Sbjct: 771 SEHSFGIHVAKMAGMPKSIVKRSNEILKQLETENRQEGIATE 812
>gi|399923769|ref|ZP_10781127.1| DNA mismatch repair protein MutS [Peptoniphilus rhinitidis 1-13]
Length = 869
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 322/647 (49%), Gaps = 90/647 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I++V + + FL LD ++ L++ + G+ + S+ +++KC T MG R
Sbjct: 262 INTVKYYNSSDFLVLDESSKRTLELVR--------GLNTFTKKGSLLEVLDKCNTSMGSR 313
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
L+ W P+++L+ + R N I F + L + + LK V DI ++ K + +P
Sbjct: 314 KLKKWVESPLINLDKIIERQNIIESFTKNLILEDKIEKILKEVYDIERLVVKISKGSINP 373
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
IY+ LKS I + I LRE N +++ I +L Y+
Sbjct: 374 REIYS-------LKSTI-------INSIKIKNMLRESE---NKYLIKFTEDFI--DLTYI 414
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
Y + I+ + +++EG+ +LDEL ++ E +L + E + K
Sbjct: 415 YNKIDSILIEDPPVVIEENRIIKEGYSKDLDELFKVSLEGKNWLLDFEKRERERTG--IK 472
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDT-----TLEQLQGFEFAFS----DMDGETKRLFY 447
++ V + +GY + + + LDD + L G E FS DM+G+
Sbjct: 473 KLKVK---HNKILGYFIEVTKSYLDDVPDDYIRKQTLVGSERFFSVELKDMEGK------ 523
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC--LFSDHLLKAVNFAAELDCFLSLA 505
L+G + L ++ I +L +I +++ +L + LD LSL+
Sbjct: 524 ----------LIGS-KDRALTLQYGIYNELREYIAKEIYNIQILSEK--LSSLDALLSLS 570
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGR-INIITGPNY 562
VA NNY++P E ++ I++GRH + E M D F+PNDT +DN I+IITGPN
Sbjct: 571 KVASLNNYVKPQFNKEGIIKIKSGRHPIVESYMNDDFFVPNDTYLDNKKEMIHIITGPNM 630
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQV 614
+GKS Y++QVALI +SHIGSFVPA++A + L D S +++ QS+FM+++ +V
Sbjct: 631 AGKSTYMRQVALITIMSHIGSFVPAESADISLVDRIFTRIGASDNLSKGQSTFMVEMKEV 690
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG 674
++ ATS+SL +LDE G+GT T DG+ + + Y + ++ K L TH EL+N
Sbjct: 691 ADIIENATSKSLLILDEVGRGTSTFDGLAIANAIVEY-IAENIKAKTLFATHYHELVN-- 747
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
K + +K T++V R + +DI+FL +++ G SYG+ A LAG+ +I R
Sbjct: 748 LEEKYDCIKNLTIAVDRQD------DDIIFLRKIINGFTNNSYGIDVAKLAGIDNVIINR 801
Query: 735 AAYVLEAAQN-NKHVE-RWSHENISAQ--DQQYKNAVEKMLAFDVLK 777
A VL+ + NK + + E I + +Q+ N V K+ D+LK
Sbjct: 802 AKEVLDVIERENKDISIDVNKEYIRQESTNQEIINFVNKLKEIDILK 848
>gi|336252228|ref|YP_004595335.1| DNA mismatch repair protein mutS [Halopiger xanaduensis SH-6]
gi|335336217|gb|AEH35456.1| DNA mismatch repair protein mutS [Halopiger xanaduensis SH-6]
Length = 930
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 193/736 (26%), Positives = 331/736 (44%), Gaps = 117/736 (15%)
Query: 54 IYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKE 113
+ TS+ S ES + R D EA + +F E VT D+ +E
Sbjct: 171 LATSSASRESIADEVSRFD-PAEAVVGPDAPTDLFPAE--------CMVTPYDERTFDRE 221
Query: 114 RIC------YLNSMMDMGSEVQVRASGGLLAVLE--------NER--------IVDTLEQ 151
R + N + + ++RA G LL+ E ER D +
Sbjct: 222 RAGEKLATYFRNPDALLAGDAEIRACGALLSYAEYVRGGAHEGERGEDDGDTEARDPANE 281
Query: 152 KESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMN 211
+ GN I + ++L LDA A +L++F+ P + ++ ++ G+++
Sbjct: 282 PQDGNPLDYITHLTRYDPREYLLLDAVALRSLELFE----PRTV---HGRDDATLVGVLD 334
Query: 212 KCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILK 271
+ + +G R LR+W RP+L+ E + +RL+A+ + + LHE L+ V D+ ++
Sbjct: 335 ETSSALGGRKLRDWLRRPLLEPERIEARLDAVEELTSAVQTREELHELLREVYDLERLIG 394
Query: 272 KFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITT 331
+ + A D L+S+ L V I+++ E+LR L+ ++
Sbjct: 395 RISRER--ANARD----LRSLRDTLAVVPDIRAEIADADCERLRRLHENL---------D 439
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR-------QIYEELPEFLEEVA 384
L V EL+ + + E G ++ EG+ ++LD+LR Q + L E E
Sbjct: 440 PLVDVRELIDDAVVADPPIEITEGGIIAEGYDEDLDDLRSTARDGEQWIDNLEERERERT 499
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
++ +++ H +H GY + + LD + + S+
Sbjct: 500 GIDSLKVGHNS----------VH--GYYIEVTNPNLDSVPEDYQRRQTLKNSER------ 541
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
+ TP+ +E ++ + + D+E + R++ + + + + A LD +SL
Sbjct: 542 --FVTPELKEREDEIVGAKQRADDLEYELFREVRREVAEEVERVQHLADALATLDALVSL 599
Query: 505 ALVAHQNNYMRPIL--------------TLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN 550
A A Q +Y RP + L+I+ GRH + E T ++F+PND
Sbjct: 600 ATAAAQYDYCRPEILERGNGNEGGSNGDGTNRSLEIEGGRHPVVERTQESFVPNDAHFTG 659
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
D R+ +ITGPN SGKS Y++QVA IV L+ +GSFVPA +A + D S +
Sbjct: 660 DRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPAGSARLTPVDRIFTRVGASDDIAG 719
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++ ++ +LR+A +SL LLDE G+GT T DG+ + I + +V L
Sbjct: 720 GRSTFMVEMDELATILREADERSLVLLDEVGRGTSTADGMA-IAQAITEHLHDEVGATTL 778
Query: 663 VCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
TH LTEL ++ L + L F E + D E +VF + + PG A SYG+
Sbjct: 779 FATHHHPLTELADD--LEGAFTLHF--------EVDQEDGE-VVFHHEIAPGAATGSYGV 827
Query: 720 HCALLAGVPAEVIKRA 735
A AGVP +V++R+
Sbjct: 828 EVATAAGVPEDVVERS 843
>gi|325299350|ref|YP_004259267.1| DNA mismatch repair protein mutS [Bacteroides salanitronis DSM
18170]
gi|324318903|gb|ADY36794.1| DNA mismatch repair protein mutS [Bacteroides salanitronis DSM
18170]
Length = 873
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 292/605 (48%), Gaps = 85/605 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++++LD +L++ S M G G S+ +++ ++PMG R
Sbjct: 255 ITSLARIEEERYVRLDKFTVHSLELI------SSMNEG----GTSLLDVIDHTISPMGAR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ +++ +N+RL+ + +F + + E L + D+ I+ K SP
Sbjct: 305 LLKRWMVFPLKEVKPINARLDVVEYFFREPDFKDFIEEKLHRIGDLERIVSKAAVGRISP 364
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNFDIVEKAASCIT 330
+ A +K+ C L+ + +ESLR EQL L I +K A I
Sbjct: 365 REVVQLKVALQAIEPIKNAC--LNAD-------NESLRRIGEQLNLC-VSIRDKIAKEIV 414
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ 390
+ + VN+ G ++ +G ELDELR+I ++L ++ E+ Q
Sbjct: 415 NDPPLL---------VNK------GGVIADGVNAELDELRRISYSGKDYLLQIQQREIEQ 459
Query: 391 --LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+P L I Y + GY + + + E ++ ++ Y
Sbjct: 460 TGIPSLK-------IAYNNVFGYYIEVRNAHKEKVPAEWIRKQTLVNAER--------YI 504
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
T + +E + + KIL +E + DLV+ + F + A LDC LS A VA
Sbjct: 505 TQELKEYEEKILGAEDKILVLETKLYNDLVADLAEFIPAIQINATQIARLDCLLSFADVA 564
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSG 564
+N Y+RP++ + +LDI+ GRH + E + + +I ND +D + +I IITGPN +G
Sbjct: 565 RENKYIRPVVADDDVLDIKQGRHPVIEKQLPVGEKYIANDVYLDTESQQIIIITGPNMAG 624
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS ++Q ALI L+ IG FVPA++A +GL D S +++ +S+FM+++++
Sbjct: 625 KSALLRQTALITLLAQIGCFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAAN 684
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLN-EG 674
+L + +SL L DE G+GT T DGI + + + + L TH EL + E
Sbjct: 685 ILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHENKKAHARTLFATHYHELNDMEA 744
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
P R+K Y ++V N ++FL +L G + S+G+H A +AG+P ++KR
Sbjct: 745 LFP---RIKNYNVTVKEVNNK------VIFLRKLERGGSEHSFGIHVAKMAGMPQSIVKR 795
Query: 735 AAYVL 739
A +L
Sbjct: 796 ADEIL 800
>gi|386001033|ref|YP_005919332.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
gi|357209089|gb|AET63709.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
Length = 893
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 176/639 (27%), Positives = 289/639 (45%), Gaps = 81/639 (12%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL---NKFLKLDATAHEALQIF 186
RA G +L L++ R+ +D + EV L F+ LD T L+IF
Sbjct: 230 ARACGAVLTYLQSARLP-------------ALDHIAEVRLYSPEDFMVLDETTLRNLEIF 276
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+ + S G ++ +++ TP G R LR W P+L E++ RL+A+
Sbjct: 277 RNIRDRSKRG--------TLVDFLDETTTPGGSRTLRKWLQMPLLSHEDIERRLDAVEEL 328
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ L A L E L+ D+ ++ + + + + D A SI L + I
Sbjct: 329 VGDPLLRADLREALRGGGDLERVVGRTSCGT--ASPKDLRALKGSIEGLPRIVAILTAAR 386
Query: 307 SESL---REQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
SE L RE+L + L V +L+ I + G ++R+G+
Sbjct: 387 SEELVRLRERLEI--------------GPLGEVADLIGRAIADDPPSAIREGGIIRDGYD 432
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT 423
ELD LR + E + +A +E + + + Y + GY + + + L
Sbjct: 433 PELDGLRSLLREGRGW---IARMERQERDRTGIKSL--RVGYNNVFGYYIEVTKANLSAV 487
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
E ++ A + + TP+ +E+++ + + +E I +
Sbjct: 488 PPEYIRKQTLAGGER--------FITPELKEMESRVLSAQERSASLEEEIFISVRREAAA 539
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDTFI 542
S +L+ ELD ++LA VA ++RP L + ++ RH +L+ F+
Sbjct: 540 KSREILERGEALGELDVLVTLAAVAADGEFVRPQLNDRGEISMRASRHPILERAMRGGFV 599
Query: 543 PNDTRIDNDGRIN---IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS-- 597
ND +D DGR N I+TGPN +GKS Y++Q+AL + L+ IGSFVPA A++ D
Sbjct: 600 AND--VDLDGRSNRVIILTGPNMAGKSTYMRQIALAIILAQIGSFVPAAFASISPVDRIF 657
Query: 598 ------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
++A QS+FMI++ ++ +L ATS+SL LLDE G+GT T DG+ + ++
Sbjct: 658 TRVGAYDDLSAGQSTFMIEMTELAKILSSATSKSLILLDEIGRGTSTFDGLA-IAWSVTE 716
Query: 652 FVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ V K + TH +L G LP +K Y M+V + E ++FL +VP
Sbjct: 717 HIHNRVRGKAVFATHYHQLTQLAGVLPG---VKNYNMAV------KEEGETVLFLRTVVP 767
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
G SYG+H A LAGVP V+ RA +L + +E
Sbjct: 768 GATDRSYGIHVAKLAGVPEAVVARAKEILREIEGEAVIE 806
>gi|428774693|ref|YP_007166480.1| DNA mismatch repair protein MutS [Halothece sp. PCC 7418]
gi|428688972|gb|AFZ42266.1| DNA mismatch repair protein MutS [Halothece sp. PCC 7418]
Length = 871
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 297/651 (45%), Gaps = 81/651 (12%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNA-SITIDSVIEVSLNKFL 173
+ S+ MG E + VRA+GGLL +E E+ A + + ++ ++ +L
Sbjct: 253 VRSLEGMGCESLPLGVRAAGGLLFYIE-----------ETQKAHQVPLQTLKTYTITDYL 301
Query: 174 KLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LD L+I QT + ++ G S+ +++ T MG R LR W L+P+LD+
Sbjct: 302 ILDQQTRRNLEIVQTVRDGTYHG--------SLLWALDRTCTAMGGRALRRWLLQPLLDI 353
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
+ + +R I+ + L L + L+ + D+ + + + + A D +S+
Sbjct: 354 KGITARQETIAELIKQTSLRNDLRQLLRQIYDLERLSGRAGAGT--ANARDLRGLAESLV 411
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L + + + G S LR A + +L + E ++ I + +
Sbjct: 412 RLTELASLVQQGESPFLR-------------ALQTVPPDLKTLGEKILASIVESPPQHLT 458
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G L+R G ++LD+++ ++ E ++L E + E + L + Y GY
Sbjct: 459 EGGLIRSGVDEQLDQMQAVFAEDKQWLAHLETSERERTGIQKLK-------VGYNKTFGY 511
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I K D ++ T Y T + +E + + + +E
Sbjct: 512 YLSIPRSKADLAPEN--------YTRKQTLTNEERYITSELKERETRILTAKDDLNRLEY 563
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
I DL + + + + + A +D LA +A N+Y RP + L I+ GRH
Sbjct: 564 EIFADLRAEVGEQAQKIREISRAIAAIDVLGGLAELAVYNDYCRPEMVEGRCLSIREGRH 623
Query: 532 VLQEMTVDT--FIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+ E T+ T F+PN T + + + + I+TGPN SGKS Y++QV LI ++ IGSF
Sbjct: 624 PVVEQTLPTGFFVPNSTEMGYEKQRDTPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSF 683
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +A +G++D + QS+FM+++++ +L AT SL LLDE G+GT
Sbjct: 684 VPARSAKLGISDRVFTRVGAVDDLATGQSTFMVEMNETANILNHATPNSLILLDEIGRGT 743
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNS 696
T DG+ + Y T +V + + TH EL + + + Y ++V EN
Sbjct: 744 ATFDGLSIAWAVAEYLAT-EVQARTIFATHYHELNELASILSN--VANYQVTVKEMEN-- 798
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+I+FL+++ PG A SYG+ LAG+P VI RA V+ Q KH
Sbjct: 799 ----EIIFLHQVQPGGADRSYGIEAGRLAGLPPSVISRAQQVM--GQIEKH 843
>gi|448494497|ref|ZP_21609484.1| DNA mismatch repair protein MutS [Halorubrum californiensis DSM
19288]
gi|445689332|gb|ELZ41572.1| DNA mismatch repair protein MutS [Halorubrum californiensis DSM
19288]
Length = 923
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 187/646 (28%), Positives = 291/646 (45%), Gaps = 85/646 (13%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ S++ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 224 LDSDLAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 272
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R S+F ++ VT G RLLR W RP D E L +RL+A
Sbjct: 273 LEITET---------MRGDADGSLFDTVDHTVTAAGGRLLREWLTRPRRDRETLAARLDA 323
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHV 298
+ + + E L D+ + + S S + + D L +
Sbjct: 324 VEALASAALARDRIREVLGDAYDLERLAARTTSGSAGARELLSVRDTLGLLPDLA----- 378
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
+ + + +++S + D V++ A+ + ELA + + K K G L
Sbjct: 379 DAVDDTALADSPAAAV----LDRVDRERAAGLREELAEA-------LAEDPPKAKTGGGL 427
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC- 414
++EG+ ELDEL + +E + +L+ +A E L H+ + Y+ Q+G +
Sbjct: 428 LKEGYDAELDELIERHESVKSWLDGLAEREKRTHGLSHVTVDRNKTDGYYV-QVGKSVAD 486
Query: 415 -IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ E + TL+ + F +D E +R + R + ERA
Sbjct: 487 QVPEHYREIKTLKNSKRF---VTDELAEKERAVLRLEEARGELEYELFEELRERVAERA- 542
Query: 474 TRDLVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHV 532
LL+ A AELD SLA A + ++ RP LT E LD++ GRH
Sbjct: 543 -------------ELLQDAGRAIAELDALASLATHAARRDWTRPELTEERQLDVEAGRHP 589
Query: 533 LQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ E T D F+PND R+D D I+TGPN SGKS Y++Q ALI L+ GSFVPA AA V
Sbjct: 590 VVEGTTD-FVPNDLRLDADRGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEV 648
Query: 593 GLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
GL D + +S+FMI++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 649 GLVDGIYTRVGALDELAQGRSTFMIEMQELSNILHSATADSLVILDEVGRGTATYDGISI 708
Query: 645 LGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIV 703
Y +V + L TH EL LP + + V E + ++
Sbjct: 709 AWAATEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVT 758
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
FL + G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 759 FLRTVRDGPTNRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 804
>gi|86141815|ref|ZP_01060339.1| putative DNA mismatch repair protein MutS [Leeuwenhoekiella
blandensis MED217]
gi|85831378|gb|EAQ49834.1| putative DNA mismatch repair protein MutS [Leeuwenhoekiella
blandensis MED217]
Length = 875
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 162/614 (26%), Positives = 293/614 (47%), Gaps = 59/614 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ ++ + ++ LD L+++Q G + + ++ +++K ++PMG R
Sbjct: 255 ISSIGRIAEDAYVWLDRFTIRNLELYQ----------GTSAKAITLLDVIDKTISPMGGR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+ LE + R + F + + + +K + D+ ++ K +
Sbjct: 305 LLKRWLALPLKTLETIKERHAIVEFIINHTDFHEKIATHIKKIGDVERLISKVATGKV-- 362
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ + S+ +++ V + E +++L+ I+ + + + + E +
Sbjct: 363 SPREIILLKNSLEAMIPVKSLAENADNKALQ---------ILGEKINNLEHLRTKIKETI 413
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
VN K G + GF ELDELR + ++L+++ E Q +
Sbjct: 414 NEDAPVNVLK----GNSIASGFNQELDELRNLATSGKDYLDKMLERETEQTG-----ITS 464
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + + D ++ ++ Y T + +E + +
Sbjct: 465 LKIASNNVFGYYIEVRNTHKDKVPESWIRKQTLVNAER--------YITDELKEYEAKIL 516
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+IL +E+ + +LV+ I F + + A+LDC S A +A +NNY RP L
Sbjct: 517 GAEERILTIEQQLFAELVTWITQFIEPVQTNAYIIAQLDCLRSYATLAQENNYCRPELDD 576
Query: 521 EPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGRINI-ITGPNYSGKSIYIKQVALIV 576
L+I GRH + E + + +I NDT +D D + I ITGPN SGKS ++Q ALIV
Sbjct: 577 SFELEITEGRHPVIEKQLPISEPYIANDTYLDRDSQQMIMITGPNMSGKSAILRQTALIV 636
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
L+ +GSFVPA AA +G+ D S +++ +S+FM+++++ +L + +SL L
Sbjct: 637 LLAQMGSFVPAQAARIGIVDRIFTRVGASDNISMGESTFMVEMNETASILNNISERSLVL 696
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
LDE G+GT T DGI + Y PK L TH EL + G R+K Y +S
Sbjct: 697 LDEIGRGTSTYDGISIAWAISEYLHEHPARPKTLFATHYHELNDMG--ETFSRIKNYNVS 754
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-EAAQNNKH 747
V ++N ++FL +L+PG + S+G+H A +AG+P +V+ RA +L + ++N+
Sbjct: 755 VKELKDN------VLFLRKLIPGGSAHSFGIHVAKMAGMPQQVLHRANKMLAQLEKSNRK 808
Query: 748 VERWSHENISAQDQ 761
E+ + N + D+
Sbjct: 809 EEQKAALNQAEDDE 822
>gi|402307624|ref|ZP_10826646.1| DNA mismatch repair protein MutS [Prevotella sp. MSX73]
gi|400378336|gb|EJP31194.1| DNA mismatch repair protein MutS [Prevotella sp. MSX73]
Length = 879
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 160/601 (26%), Positives = 284/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +KF++LD +L++ Q + ++G S+ ++++ VTPMG R
Sbjct: 258 ITALARIEEDKFVRLDKFTARSLELLQPMQ----------EDGLSLLDVIDRTVTPMGSR 307
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ +N RL+ + +F + A + E + D+ I+ K SP
Sbjct: 308 LLRRWMVFPLKDVRPINERLDIVDYFFKKPDFRACVDEEFHRMGDLERIISKVAVGRVSP 367
Query: 277 SFIYTASDWTAFLKSI---CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + ++ + C + VG SL E LR D ++K +L
Sbjct: 368 REVVQLKNALTAIRPVKMACLSAGNEALKRVGEQLSLCESLR----DRIDKEIQPDPPQL 423
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+N+ G ++ + + ELDELR I ++L E+ E+ +
Sbjct: 424 ------------LNK------GDVIADNYSPELDELRSISRHGKDYLLEIQQREIEKTGI 465
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ + + + GY + + D E ++ A ++ Y T + +
Sbjct: 466 TSLK-----VGFNNVFGYYLEVRNTFKDKVPEEWVRKQTLAQAER--------YITQELK 512
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KI+ +E + +L+ + F + N A LDC LS A + ++ Y
Sbjct: 513 EYEEKILGADEKIIMLETKLFNELILAMQEFIPQIQIDANLVAHLDCLLSFAKTSEEHRY 572
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
+RP + +LDI+ GRH + E + + ++PND +D ++ +ITGPN +GKS +
Sbjct: 573 VRPTIDESEVLDIKQGRHAVIETQLPIGEQYVPNDVYLDTVKQQVMMITGPNMAGKSALL 632
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +G FVPA++A +GL D S +++ +S+FM+++ + +L
Sbjct: 633 RQTALIVLLAQVGCFVPAESARIGLVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 692
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKS 679
+ +SL L DE G+GT T DGI + + Y + L TH EL E P
Sbjct: 693 SGRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKARARTLFATHYHELNEMEKNFP-- 750
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV E N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 751 -RIKNYNVSV--KELNGK----VIFLRKLERGGSEHSFGIHVAEIAGMPRSIVKRANVIL 803
Query: 740 E 740
+
Sbjct: 804 K 804
>gi|448532901|ref|ZP_21621321.1| DNA mismatch repair protein MutS [Halorubrum hochstenium ATCC
700873]
gi|445706135|gb|ELZ58020.1| DNA mismatch repair protein MutS [Halorubrum hochstenium ATCC
700873]
Length = 935
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 290/642 (45%), Gaps = 77/642 (11%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEA 182
+ SE+ VRA+G +L+ +E E+G + ++ + + + +DAT
Sbjct: 234 LDSELAVRAAGAVLSYVE-----------ETGAGVLASMTRLTAYGADDRVDVDATTQRN 282
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I +T R ++F ++ VT G RLLR W RP D L RL+A
Sbjct: 283 LEITET---------MRGDADGTLFDTVDHTVTAAGGRLLREWLTRPRRDRGTLADRLDA 333
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ + + E L D+ + + S S L S+ L +
Sbjct: 334 VEALSSAALARDRVREVLDDAYDLERLASRTTS------GSAGARELLSVRDTLALLPAL 387
Query: 303 EVGISES-LREQLRLLNFDIVEKA-ASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
I S L + FD V++ A+ + EL + + K K G L++
Sbjct: 388 ADAIEGSPLADSPAAAVFDRVDRERAAALRAELDEA-------LAEDPPKAKTGGGLLKR 440
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC--IF 416
G+ DELDEL + +E + +L+ +A E + L H+ + YI Q+G + +
Sbjct: 441 GYDDELDELIERHESVKSWLDGLAEREKRRHGLSHVTVDRNKTDGYYI-QVGKSVADQVP 499
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
E + TL+ + F +D E +R L+ G++ +++ +
Sbjct: 500 EGYREIKTLKNSKRF---VTDELSEKEREVLR------LEEARGELEYELFEA------- 543
Query: 477 LVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM 536
L + ++ L A AELD SLA A + ++ RP LT E LD++ GRH + E
Sbjct: 544 LRERVAERAELLQDAGRAVAELDALASLATHAARRDWTRPELTEERRLDVEAGRHPVVEG 603
Query: 537 TVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
T D F+PND R+D D I+TGPN SGKS Y++Q ALI L+ GSFVPA AA VGL D
Sbjct: 604 TTD-FVPNDLRLDPDREFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAAEVGLVD 662
Query: 597 S--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
+ +S+FM+++ ++ +L AT SL +LDE G+GT T DGI +
Sbjct: 663 GIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIAWAA 722
Query: 649 INYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
Y +V + L TH EL LP + + V E + ++ FL
Sbjct: 723 TEYL-HNEVRARTLFATHYHELTTLADHLP-----RVANVHVAVDERDG----EVTFLRT 772
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 773 VRDGPTNRSYGVHVADLAGVPDPVVSRADEVLDRLREEKAIE 814
>gi|297617257|ref|YP_003702416.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
gi|297145094|gb|ADI01851.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
Length = 876
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 289/602 (48%), Gaps = 63/602 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++L LD L++ + K G S+ +++ C T MGRRLL+ W +P
Sbjct: 267 REYLGLDVNTRRNLELTRNLKDGKREG--------SLLAVIDCCRTAMGRRLLQRWLEQP 318
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
++D++ +N RL+A+ S L + E L V DI + + S + + + A
Sbjct: 319 LVDVKAINERLDAVEEMYNSFSLRERIREILGDVHDIERLAGRIGSG--VASPRELLALK 376
Query: 290 KSICSLLHVNKIFEVGISESLREQL--RLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
S+ +L F+ + E +R L ++L D +E VY L+ ++D N
Sbjct: 377 NSLINL----PAFKALLPE-VRTHLLKKILELDTLED-----------VYRLLDSVLDEN 420
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G +++ G E+DELR++ E E+L LE Q + + +
Sbjct: 421 APASIREGGIIKPGCNPEVDELRKLAFEGKEWL-----LEYEQGERERTGIKSLKLGFNR 475
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + + ++ ++ Y T + + + +++
Sbjct: 476 VFGYFIEVTKPNVHLVPSHYVRKQTLVNAER--------YITDDLKNYEEKVLSARERLV 527
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
+E+ + + L + L + A+LD LA A +++Y+RP++ ++ ++
Sbjct: 528 LLEQELFQVLREEVACHVSRLQEVAGALAKLDVIACLAETAFRHDYVRPLVDDSDVIFVK 587
Query: 528 NGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
NGRH + E + ++F+PNDT +D+ + R+ IITGPN GKS Y++QVALI L+ +GSF
Sbjct: 588 NGRHPVVERFLGSESFVPNDTYLDDKERRLAIITGPNMGGKSTYMRQVALITILAQVGSF 647
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA A +G+ D S + QS+FM+++ +V +L+ AT +SL +LDE G+GT
Sbjct: 648 VPATEARIGVVDQVFTRVGASDDLVGGQSTFMVEMVEVAHILKNATRKSLVILDEIGRGT 707
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ + + + + + K L TH EL + LP + +SV E+
Sbjct: 708 STFDGMSIAQAVLEH-ICSHIGAKTLFATHYHELTGLDEVLP-----GVFNLSVSVKESA 761
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
++FL +++PG A SYG+ A LAG+P VI+RA +L + ++ V++ N
Sbjct: 762 GA----VIFLKKVIPGRADKSYGIQVAGLAGLPVGVIQRAGEILRSLESKGGVDKVEAIN 817
Query: 756 IS 757
S
Sbjct: 818 AS 819
>gi|291394958|ref|XP_002713953.1| PREDICTED: mutS homolog 3 [Oryctolagus cuniculus]
Length = 1057
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 292/611 (47%), Gaps = 101/611 (16%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ ++ T L+I Q G S+F +++ T GRR L+ W +P+
Sbjct: 459 EFMTINGTTLRNLEILQNQTDMKTKG--------SLFWVLDHTKTSFGRRKLKKWVTQPL 510
Query: 231 LDLENLNSRLNAISFFLCSEE-LMASLHETLKYVKDIPHIL-----KKFNSPSFI----- 279
L L ++N+RL+A+S L SE + + L + DI L KK ++ F
Sbjct: 511 LKLRDINARLDAVSEVLHSESSVFGQIENHLNKLPDIERGLCSIYHKKCSTQEFFLIVKT 570
Query: 280 --YTASDWTAFLKSICSLLHVN--KIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
+ S++ A + ++ S +H + + + I E LR R L + E+AA ++
Sbjct: 571 LCHLKSEFQALVPAVNSQVHSDLLRTCALDIPELLRPAERYLQV-LNEQAA-----KIGD 624
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
EL + D K++ +E++++ E++ L+E+ +
Sbjct: 625 KTELFKDLSDFPLIKKRK-------------NEIQEVTEKIQVHLQEIRKI--------- 662
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-YHTPKTRE 454
+ P Y+ G I ++ +++L + G TK + +H+P
Sbjct: 663 --LKNPSAQYVTVSGQEFMI---EIKNSSLSCIPADWIKV----GSTKAVSRFHSP---- 709
Query: 455 LDNLLGDIYHKILDMERAITRDL----VSHICLFSDH---LLKAVNFAAELDCFLSLALV 507
+ + Y ++ + + D + + FS H L KAV+ A +DC SL V
Sbjct: 710 ---FIVENYRRLNQLREQLALDCGAEWLGFLETFSGHHDSLCKAVHHLATVDCIFSLTKV 766
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYS 563
A Q NY RP L E + I+NGRH + ++ + D ++PN T + D R+ IITGPN
Sbjct: 767 AKQGNYCRPALQEERKIIIKNGRHPVIDVLLGEQDQYVPNSTNLSGDAERVMIITGPNMG 826
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS YIKQVALI ++ IGS+VPA+ AT+G+ D + ++ +S+FM +L
Sbjct: 827 GKSSYIKQVALIAVMAQIGSYVPAEEATLGIVDGIFTRMGAADNIYKGRSTFMEELTDTA 886
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
++RQAT QSL +LDE G+GT T DGI + T+ YF+ DV L TH +
Sbjct: 887 EIIRQATPQSLVILDELGRGTSTHDGIAIAYATLEYFIR-DVQSLTLFVTHYPPVCE--- 942
Query: 676 LPK--SERLKFYTMSVLRPENNSTD-------VEDIV-FLYRLVPGHALLSYGLHCALLA 725
L K S+++ Y M L E+ S V D V FLY++ G A SYGL+ A LA
Sbjct: 943 LEKHYSQQVGNYHMGFLVTEDESKQDPGGEEPVPDFVTFLYQITQGVAARSYGLNVAKLA 1002
Query: 726 GVPAEVIKRAA 736
VP EV+++AA
Sbjct: 1003 DVPGEVLRKAA 1013
>gi|319936493|ref|ZP_08010909.1| DNA mismatch repair protein mutS [Coprobacillus sp. 29_1]
gi|319808608|gb|EFW05160.1| DNA mismatch repair protein mutS [Coprobacillus sp. 29_1]
Length = 830
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 281/596 (47%), Gaps = 57/596 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I + EV F+ +D+ ++L++ + + S+ ++ +++ + MG R
Sbjct: 231 IQVIQEVKTEDFIYMDSYTKKSLELVKNADNESYG---------TLQWLLDDTKSAMGGR 281
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W RP+++ E + R++ I + + ++ + + + DI + + +
Sbjct: 282 LLRQWIERPLINQEKIERRMDIIEILIDNFIERETIKDIINDIYDIEKLAGRIAFGNVNA 341
Query: 281 TASDW-TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
W A LK I L H + + SL EQL +L ++ +L
Sbjct: 342 RDLKWIAASLKVIPELKHQLLSLDNQYTHSLAEQL----------------LDLTHITDL 385
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
+ I N G L+++G+ +ELDELR I E ++L E E + K +
Sbjct: 386 IDQAIVDNPPLTIKEGGLIKDGYNEELDELRYIRENGKQWLSEFEQKERERTG--IKGL- 442
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y GY + + + L E FE+ +R TP+ +E++ +
Sbjct: 443 --KIGYNRVFGYYIEVTKSYLPMIKDE----FEYTRKQSISNAERFV--TPELKEMEAKI 494
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ K++ +E I + +I + + A++D + SLA A N Y+RP
Sbjct: 495 LSAHDKMVALEYEIFVQMREYIKKDVHSIQDVASVVAQVDVYQSLASKASHNGYVRPTFN 554
Query: 520 LEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ ++DI NGRH + Q ++ ++PND I+ND I +ITGPN GKS Y++Q+AL V
Sbjct: 555 DQHIVDITNGRHGVIEQVISRQNYVPNDLHIENDAPILLITGPNMGGKSTYMRQIALCVI 614
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVP + A + + D S + + QS+FM+++ + LR A+ SL +
Sbjct: 615 MAQIGSFVPCEHANLPVFDQIFTRIGASDDLISGQSTFMVEMLEANNALRYASQDSLIIF 674
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ + I Y T + L TH EL E+ K +
Sbjct: 675 DEIGRGTATFDGMAIAQAMIEYIATS-IRCVTLFSTHYHEL-----TMMDEKFKIQNVHA 728
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+ S + + IVFLY++ PG + SYG++ A LA +P EVI RA +L++ ++N
Sbjct: 729 ----SASVEGDHIVFLYKIKPGRSHRSYGINVAQLAKLPDEVIARAKIILKSLEDN 780
>gi|359412943|ref|ZP_09205408.1| DNA mismatch repair protein mutS [Clostridium sp. DL-VIII]
gi|357171827|gb|EHJ00002.1| DNA mismatch repair protein mutS [Clostridium sp. DL-VIII]
Length = 915
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 299/617 (48%), Gaps = 65/617 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + S G S+ +++K T MG R +R W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKSKKG--------SLLWVLDKSATSMGGRTIRKWIEEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ RLN ++ S L LK + DI I+ K ++ + A D + S
Sbjct: 310 IKSEIEKRLNGVNEAFSSISFNEDLRNALKEIYDIERIVGKISNKNV--NAKDMLSLKAS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + + + SE L+E L+ EL + +L+ I S
Sbjct: 368 LEKIPTIKGLLRNADSELLKEYYEDLD-------------ELIDIKDLLDLSIKEEPSLS 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ E+DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 IKEGNIIKDGYNSEVDELRQSKLHGKEW---IAALENQEREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYSSIPEGRYVRKQTLANAERYITEELKVME-DKILGS-EEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ ++ I L K+ + LD +LALVA +N+Y++P + E ++I +GR
Sbjct: 522 YRLFTEIRDTIEKEISRLKKSARIISNLDGISTLALVALENDYIKPQINEEGYIEIVDGR 581
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ D + +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 582 HPVVEKVIGKGEFVSNNTTLNQTDKELLLITGPNMAGKSTYMRQVALITIMAQIGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS+SL LLDE G+GT T
Sbjct: 642 SSANISICDKVFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y ++ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITKENNLRCKTLFATHYHELVKLEGILPG---VKNYSVAVKKMKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL--EAAQNNKHVERWSHEN 755
++FL ++V G A SYG+ A LAG+P VI RA +L +NN + + S
Sbjct: 757 ----VIFLRKIVEGGADESYGIEVAKLAGLPEAVINRAKEILLDLEGENNFDINKVS--- 809
Query: 756 ISAQDQQYKNAVEKMLA 772
+A++++ + AV+K ++
Sbjct: 810 -AAKNEESEIAVDKEIS 825
>gi|78357019|ref|YP_388468.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
gi|90109846|sp|Q30ZX3.1|MUTS_DESDG RecName: Full=DNA mismatch repair protein MutS
gi|78219424|gb|ABB38773.1| DNA mismatch repair protein MutS [Desulfovibrio alaskensis G20]
Length = 904
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 290/630 (46%), Gaps = 64/630 (10%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
VRA G LL L QK+ N + +LN+ L LD L++F+
Sbjct: 236 VRACGALLTYLSQT-------QKQDLNHLCQFKPL---NLNRHLLLDEITERNLELFRRL 285
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
GR +G +++ +++ VTPMG RLL+ P + ++ A+S F
Sbjct: 286 D-------GRKGKG-TLWHVLDHTVTPMGGRLLQERLKHPWREQAPIDETQEAVSHFFAH 337
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLLHVNKIFEV--- 304
L L E L V DI ++ ++ F+ A+ D+ A +S+ +L V ++ E
Sbjct: 338 NTLRRQLREALDTVYDI----ERLSTRIFLNRATPRDYVALRQSLKALPAVRELLEAPQT 393
Query: 305 --GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGF 362
G + EQL + + +LA ++L+ + N G L R+GF
Sbjct: 394 GDGRYATPEEQLGAALPPFLHRMLKSWD-DLADYHDLLEKALVDNPPHVITEGGLFRQGF 452
Query: 363 CDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
LDEL + E L ++ + E+ Q + K V+ + + EE L D
Sbjct: 453 HPALDELMDLSEHGASKLHDLLA-EVQQTTGISKIKLGNNRVFGYYFEVPKSVSEE-LPD 510
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
T F +R Y + + +EL+ L K ME + + L H+
Sbjct: 511 T---------FVRRQTLANAER--YTSERLKELEEKLFSAADKRKTMELKLFQQLREHVA 559
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-- 540
+L + A LD + LA A N++RP+L + I+ GRH + E
Sbjct: 560 QARPRVLFMADLLATLDHWQGLAEAARHWNWVRPVLHDGQDIVIREGRHPVVEAVQGPAG 619
Query: 541 FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
FIPND RID+ R+ +ITGPN +GKS ++Q A+I L+ IGSFVPA A +GL D
Sbjct: 620 FIPNDLRIDDQRRLLLITGPNMAGKSTVLRQAAIICILAQIGSFVPAREARIGLCDRIFS 679
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S ++ QS+FM+++ + +LRQAT +SL +LDE G+GT T DG+ L +
Sbjct: 680 RVGASDNLAQGQSTFMVEMMETARILRQATRRSLVILDEIGRGTSTFDGLALAWAVVEEL 739
Query: 653 VTCDVPP-KVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ + L TH EL + EG +P + M++ E +IVFL RLVP
Sbjct: 740 MKKQQAGIRTLFATHYHELTSLEGTIP-----GVHNMNIAIKEWGG----EIVFLRRLVP 790
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
G + SYG+ A LAGVP V++RA +LE
Sbjct: 791 GPSDRSYGVEVAKLAGVPQNVVQRARQILE 820
>gi|113477122|ref|YP_723183.1| DNA mismatch repair protein MutS [Trichodesmium erythraeum IMS101]
gi|123160394|sp|Q10YG4.1|MUTS_TRIEI RecName: Full=DNA mismatch repair protein MutS
gi|110168170|gb|ABG52710.1| DNA mismatch repair protein MutS [Trichodesmium erythraeum IMS101]
Length = 901
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 192/705 (27%), Positives = 321/705 (45%), Gaps = 99/705 (14%)
Query: 112 KERICY---LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVI 165
KER+ L S+ +G E + VRA+GGLL LE QKE+ + + +
Sbjct: 256 KERLLMKFQLASLEGLGCERLPLGVRAAGGLLEYLEET-------QKEN---QVPLQRLR 305
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
+L FL LD + L+I QT + S+ G S+ +++K T MG R LR W
Sbjct: 306 SYTLADFLILDHQSRRNLEITQTVRDGSYQG--------SLLSVVDKTSTAMGGRALRRW 357
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+P+L L+ + +R + I + + +L + L+ + D+ + + + + A D
Sbjct: 358 LQQPLLSLKGIRARHDTIDELIQNNDLRQDIQRVLRQIYDLERLTGRTGAGT--ANARDL 415
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
S+ L ++ G S L+ ++ I+++ I + L
Sbjct: 416 VFLADSLTKLPELSTFVSQGNSPYLKVLQKIP--PILQELGKKIHSNLVE---------- 463
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCI 403
+ S++ G L+R G + LDE+R++ EE +++ E E +P+L +
Sbjct: 464 -SPSQKLKEGGLIRPGINERLDEMRKLAEEDQKWIASLETTERERTGIPNLK-------V 515
Query: 404 VYIHQIGYLMCIFEEKL----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
Y GY + I + K DD T +Q E +R K RE+ L
Sbjct: 516 GYNKAFGYYISISKSKANLAPDDYTRKQTLTNE----------ERYITEELKEREVRILT 565
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ ++E I DL + + +++ + A LD LA VA NY+RP +
Sbjct: 566 AQ--DDLNELEYDIFVDLRNEVGEYAEEIRNVSRAVAALDILCGLADVAIYQNYVRPTMV 623
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPN-------DTRIDNDG-------RINIITGPNYS 563
L I GRH + E + F+PN + +N G + I+TGPN S
Sbjct: 624 DSRELKIIEGRHPVVEKYLPAGFFVPNTAILGSKNLEKNNSGITPYSAPDLIILTGPNAS 683
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVG 615
GKS Y++QV LI ++ IGSFVPA +A +G++D + QS+FM+++++
Sbjct: 684 GKSCYLRQVGLIQLMAQIGSFVPASSAVLGVSDRIFTRVGAVDDLATGQSTFMVEMNETA 743
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
+L AT +SL LLDE G+GT T DGI + Y T ++ + + TH EL
Sbjct: 744 NILNHATEKSLVLLDEIGRGTATFDGISIAWSVAEYLAT-EILSRTIFATHYHELNELSS 802
Query: 676 LPKSERLKFYTMSVLR-PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
+ + + Y ++V P+ IVFL+++ PG A SYG+ LAG+P VI R
Sbjct: 803 I--LDNVANYQVTVKELPDK-------IVFLHQVQPGGADKSYGIEAGRLAGLPDSVIAR 853
Query: 735 AAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGD 779
A V++ +N+ + + I+ ++++ VE++ F GD
Sbjct: 854 ARQVMQQIENHSKIAIGLRKGINKKEEEEIITVEQLDIFSEEFGD 898
>gi|307243914|ref|ZP_07526039.1| DNA mismatch repair protein MutS [Peptostreptococcus stomatis DSM
17678]
gi|306492736|gb|EFM64764.1| DNA mismatch repair protein MutS [Peptostreptococcus stomatis DSM
17678]
Length = 880
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 178/627 (28%), Positives = 300/627 (47%), Gaps = 65/627 (10%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E +LN + + AL +F I +K+ S+ +++ TPMG R+L+
Sbjct: 250 ETNLNTINIYQSGDYMALDLFTRINLELTKTIRTSKKKGSLLQVLDATSTPMGARMLKKH 309
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+P++ + ++ RLN L L ++ + D+ I K + D
Sbjct: 310 IEQPLIKKDMIDHRLNITHEIKDDYILRDELKTSVSSIFDLERICAKIAYDRV--SPKDL 367
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
S+ L ++ + L++ + L+ C L +Y L+ I
Sbjct: 368 VNLKNSLQVLPYIVDTISNSKASGLKDFIGSLD---------C----LKDIYILIKDSIK 414
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
S G +++E + ELD+LR I + + ++ E + K + I Y
Sbjct: 415 DEPSTGIKDGNIIKEAYSHELDQLRDISQNGAFMIRDIEQREREKTG--AKSL---KIGY 469
Query: 406 IHQIGYLMCIFEEKL-----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
GY + I + L DD+ + + Q A +R TP+ +E+++ +
Sbjct: 470 NKVFGYYIEITKASLLQIDIDDSYIRK-QTLVNA--------ERFI--TPELKEIEDKIL 518
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+ KI ME +++ + D + + A+LD ++S A++A++ NY+RP +
Sbjct: 519 NAEDKIKAMEYEFFKNISRQVYQNIDRIQIVASKIAQLDLYISNAIIANKYNYVRPNINQ 578
Query: 521 EPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+L I+ GRH + E + + FI NDT I D INIITGPN SGKS Y++QVALI +
Sbjct: 579 NGVLAIEGGRHPVIEQIIGEENFINNDTDIGYDNMINIITGPNMSGKSTYMRQVALITLM 638
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+HIGSFVPA A + + D S + QS+FM+++ +V +L A+S SL +LD
Sbjct: 639 AHIGSFVPATYANIPIVDRIFTRVGASDDLAQGQSTFMVEMDEVSQILSNASSDSLIILD 698
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
E G+GT T DGI L + Y + + K L TH EL + E P R+K Y+++V
Sbjct: 699 EIGRGTSTYDGISLAWSIVEY-IYKRIGAKTLFATHYHELTDLEDKYP---RIKNYSVAV 754
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ +DIVFL +++ G A SYG++ A LA +P +VI+RA +L + N H+
Sbjct: 755 ------QEEGDDIVFLRKIIAGAADRSYGIYVAKLAKLPGQVIERADQILVELEKN-HI- 806
Query: 750 RWSHENISAQDQQYKNAVEKMLAFDVL 776
EN ++ DQ + ++ L+FD++
Sbjct: 807 ----ENSASIDQSREKNIQ--LSFDMV 827
>gi|423346573|ref|ZP_17324261.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL03T12C32]
gi|409219724|gb|EKN12684.1| DNA mismatch repair protein mutS [Parabacteroides merdae
CL03T12C32]
Length = 879
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 177/642 (27%), Positives = 302/642 (47%), Gaps = 82/642 (12%)
Query: 137 LAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMG 196
L V+ + I+ L+Q + + S I S+ + +++++LD +L++ T
Sbjct: 229 LGVVASGAILYYLDQTQHTHIS-HITSLSRIEEDRYVRLDKFTVRSLELVST-------- 279
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
+EG S+ +++K V+PMG R+LR W L P+ D++ ++ R + + +F E+ L
Sbjct: 280 --MNEEGTSLLDVLDKTVSPMGSRMLRRWILFPLKDVKPIHERQDVVEYFFRHPEVKELL 337
Query: 257 HETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISES 309
E L+ + D+ I+ K SP + A +K C+ + +G
Sbjct: 338 EEKLEQIGDLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACTASDEPSLCRIG---- 393
Query: 310 LREQLRL--LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
EQL L D +EK + L +NR G ++ G ELD
Sbjct: 394 --EQLNACALIRDRIEKEINNDPPSL------------LNR------GGVIATGVNAELD 433
Query: 368 ELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL 425
ELR I ++L +V + E L + L I + + GY + + D
Sbjct: 434 ELRAIAYSGKDYLLKVQAREIDLTGISSLK-------IGFNNVFGYYIEVRNAYKDKVPA 486
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
E ++ ++ Y T + +E + + KIL +E + +LV + +
Sbjct: 487 EWIRKQTLVNAER--------YITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYI 538
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFI 542
+ N LDC LS A VA N Y+RP + ++DI+ GRH + E + + +I
Sbjct: 539 PPIQMNANLIGRLDCLLSFAKVAESNRYIRPDVNDSQVIDIKAGRHPVIEKQLPIGEPYI 598
Query: 543 PNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
ND +D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA+ A +G+ D
Sbjct: 599 ANDVYLDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTR 658
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + + Y
Sbjct: 659 VGASDNISVGESTFMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIH 718
Query: 654 T-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ K L TH E LNE +R+K Y +SV N ++FL +LVPG
Sbjct: 719 EHPNARAKTLFATHYHE-LNE-MEASFKRIKNYNVSVKEVNNK------VIFLRKLVPGG 770
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
+ S+G+H A +AG+P ++KR+ +L+ + E + E
Sbjct: 771 SEHSFGIHVAKMAGMPKSIVKRSNEILKQLETENRQEGIATE 812
>gi|237733849|ref|ZP_04564330.1| DNA mismatch repair protein mutS [Mollicutes bacterium D7]
gi|229383187|gb|EEO33278.1| DNA mismatch repair protein mutS [Coprobacillus sp. D7]
Length = 837
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 288/616 (46%), Gaps = 53/616 (8%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E++ ++ +D +AL++ + K G S+F ++++ T MG R+L+ W
Sbjct: 239 EINNEDYVTMDLYTKKALELTSSAKSNDKYG--------SLFWLLDQTKTAMGSRMLKQW 290
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP+++ E + RL+ + F S+ E LK + D+ + + + A D
Sbjct: 291 IERPLINQEQIEERLDIVEIFTNHFIQRESIKEILKDIYDLERLSSRIAFGNI--NARD- 347
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
LK I S L V L+ QL L+ ++ A T +L+++ L+ I
Sbjct: 348 ---LKWISSSLKV--------VPELKNQLLSLDEPLISALADHFT-DLSHITNLIDQAIV 395
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
N G L++EGF +ELDELR I + ++L + E + K + V Y
Sbjct: 396 DNPPLTVKEGNLIKEGFNEELDELRYIRDHGKQWLAQFEQNERDKTG--IKGLKVG---Y 450
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + L L EF ++ + + TP+ +E+++ L K
Sbjct: 451 NRVFGYYIEVTKGNL------SLVKDEFNYTRKQSLSNAERFVTPELKEMESKLLSAQDK 504
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
++ +E A+ ++ ++I + A++D F SLA+++ +N+Y+RP +
Sbjct: 505 MIKLEYALFTEIRNYIKKDVHAIQDVAKIIAKIDVFQSLAMISSENSYVRPTFNHNKVFK 564
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ +GRH + E M T++ ND ID + +ITGPN GKS Y++ +ALI + IG
Sbjct: 565 VVDGRHGVIERVMAQGTYVSNDVNIDAANPVMLITGPNMGGKSTYMRTIALIALMGQIGC 624
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVP A + + D S + + QS+FM+++ + LR AT SL + DE G+G
Sbjct: 625 FVPCSEACIPIFDQIFTRIGASDDLISGQSTFMVEMLEANNALRFATENSLIIFDEIGRG 684
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T T DG+ + I Y + + L TH EL + + L + +
Sbjct: 685 TATFDGMAIAQAMIEY-IAAKIKCITLFSTHYHEL----TFLEEKNLGIKNVHA----SA 735
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
S + +D+VFLYR+ PG + SYG++ A LA +P V+ RA +LEA + N S +
Sbjct: 736 SIENDDLVFLYRIKPGRSNKSYGVNVAKLAKLPDAVLNRANVLLEALEENNIEHHLSDDT 795
Query: 756 ISAQDQQYKNAVEKML 771
+ + VEK L
Sbjct: 796 LKEAPPVTVSVVEKYL 811
>gi|358372845|dbj|GAA89446.1| DNA mismatch repair protein Msh5 [Aspergillus kawachii IFO 4308]
Length = 463
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 215/408 (52%), Gaps = 37/408 (9%)
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
+L V ++ I+D++ S+E+G T+V+ G ELD ++ Y+ + L++VA
Sbjct: 49 AAQLYKVGRMIQEIVDIDSSEEQGR-TVVKPGIDRELDRIKDRYDGMNSLLKQVAIEIAT 107
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
+P ++ V ++Y Q+G+ + I L++ +G E + M R ++
Sbjct: 108 TIPE-SYDIDV-NVIYFPQLGFNIAI---PLNEAGDAAYRGVEDEWELMFFTENRAYFKD 162
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
+ RE+D LGDIY I + E I DL + + LL+A ++ D L++A A
Sbjct: 163 FRMREMDEKLGDIYGIICEKEIEIVYDLAQRVLHYETVLLEASDYLTG-DSLLAMAQAAS 221
Query: 510 QNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI--------------------- 548
+RP + ++ I+ GRH+LQE+TV +++PNDT +
Sbjct: 222 FYRLVRPKMVEGDVIKIRGGRHILQELTVSSYVPNDTFLVDRRTRGEPLGPLHLTPNPHE 281
Query: 549 -DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS---KHMTAE- 603
D + ++TGPNYSGKS+Y+KQVAL+V+L+ +GSFVPA++A +G+ D K T +
Sbjct: 282 SDYGPSMLLLTGPNYSGKSVYMKQVALVVYLAQVGSFVPAESAELGIVDKILVKSNTQDS 341
Query: 604 ----QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPP 659
QS+FM DL Q+ L+Q T +SL L+DEFGKGT DGIGL G + + + + P
Sbjct: 342 VSQIQSTFMNDLQQLSFDLKQVTGRSLLLIDEFGKGTNENDGIGLACGVLEHLLNREDAP 401
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
KV+ TH E+L G L +L+ M V E + I +LY+
Sbjct: 402 KVIAATHFHEILANGYLKPRPQLQLGHMEVRVHEEPGEAEDQITYLYK 449
>gi|283782023|ref|YP_003372778.1| DNA mismatch repair protein MutS [Pirellula staleyi DSM 6068]
gi|283440476|gb|ADB18918.1| DNA mismatch repair protein MutS [Pirellula staleyi DSM 6068]
Length = 869
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 171/633 (27%), Positives = 298/633 (47%), Gaps = 90/633 (14%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQT 188
+RA+GG+L L +E+ S+ ID ++ + L++D +L+I +T
Sbjct: 232 IRAAGGILEYL-----------RETQKTSLDHIDRLLPYRSGESLEIDEATRRSLEITRT 280
Query: 189 DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC 248
+ A+EG S+ ++++ +TP G RLL +W P+ +L + +R +A+
Sbjct: 281 FRSG-------AREG-SLLSVIDQTITPPGSRLLADWVGAPLTNLAAIGARQDAVELLRN 332
Query: 249 SEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLL-HVNKIFE 303
S + + E L V D+ ++ + SP + A L + +L+ H+
Sbjct: 333 SATVRRQIREELAGVYDLERLIARVTTLRASPRDLAFVGRTLARLPQLKALVAHLRAPLL 392
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
+ L E L + C + R G +R+GF
Sbjct: 393 DDLQTRLDESPALRDLLAAALEDDCPL---------------LARD-----GNFIRQGFH 432
Query: 364 DELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
ELD LR++ ++ + +E +P+L + + GY + I + +
Sbjct: 433 GELDRLREMAHGGKAWIARYQADQIEKTGIPNLK-------VAFNKVFGYYIEITNAQKE 485
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
T E ++ A ++ Y TP+ +E + + + ++E + +L
Sbjct: 486 KTPPEYIRKQTVASAER--------YITPELKEYEEKVLTADERSKELEYQLFVELRDKT 537
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVD 539
F+ L AELD +LA +A + +Y RP++T + +++I GRH + + +
Sbjct: 538 HQFARALRMTAAAIAELDVLAALAQLADRPDYCRPVMTEDQVVEIVEGRHPVLDAILPRG 597
Query: 540 TFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
TF+PNDT + DG + +ITGPN +GKS YI+QVA++ L+H+GSF+PA AT+G+ D
Sbjct: 598 TFVPNDTTLGTDGGLVMLITGPNMAGKSTYIRQVAVLSLLAHVGSFLPASRATIGICDRI 657
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S ++ QS+FM+++ + +L AT++SL +LDE G+GT T DGI L +
Sbjct: 658 FARVGASDELSRGQSTFMVEMTETARILNSATARSLVILDEIGRGTSTYDGISLAWAIVE 717
Query: 651 YF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+ + C + L TH EL + G L L +++V ++ +V L+
Sbjct: 718 HLHDQIGC----RTLFATHYHELTDLAGSLAGVRNL---SVAVREWQDQ------VVLLH 764
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++VPG A SYG+HCA LAGVP V +RA +L
Sbjct: 765 KIVPGAADKSYGIHCARLAGVPRSVNERAKQIL 797
>gi|315606965|ref|ZP_07881971.1| DNA mismatch repair protein MutS [Prevotella buccae ATCC 33574]
gi|315251346|gb|EFU31329.1| DNA mismatch repair protein MutS [Prevotella buccae ATCC 33574]
Length = 889
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/601 (26%), Positives = 284/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +KF++LD +L++ Q + ++G S+ ++++ VTPMG R
Sbjct: 268 ITALARIEEDKFVRLDKFTARSLELLQPMQ----------EDGLSLLDVIDRTVTPMGSR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ +N RL+ + +F + A + E + D+ I+ K SP
Sbjct: 318 LLRRWMVFPLKDVRPINERLDIVDYFFKKPDFRACVDEEFHRMGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFLKSI---CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + ++ + C + VG SL E LR D ++K +L
Sbjct: 378 REVVQLKNALTAIRPVKMACLSAGNEALKRVGEQLSLCESLR----DRIDKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+N+ G ++ + + ELDELR I ++L E+ E+ +
Sbjct: 434 ------------LNK------GDVIADNYSPELDELRSISRHGKDYLLEIQQREIEKTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ + + + GY + + D E ++ A ++ Y T + +
Sbjct: 476 TSLK-----VGFNNVFGYYLEVRNTFKDKVPEEWVRKQTLAQAER--------YITQELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KI+ +E + +L+ + F + N A LDC LS A + ++ Y
Sbjct: 523 EYEEKILGADEKIIMLETKLFNELILAMQEFIPQIQIDANLVAHLDCLLSFAKTSEEHRY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
+RP + +LDI+ GRH + E + + ++PND +D ++ +ITGPN +GKS +
Sbjct: 583 VRPTIDESEVLDIKQGRHAVIETQLPIGEQYVPNDVYLDTVKQQVMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +G FVPA++A +GL D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQVGCFVPAESARIGLVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKS 679
+ +SL L DE G+GT T DGI + + Y + L TH EL E P
Sbjct: 703 SGRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKARARTLFATHYHELNEMEKNFP-- 760
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV E N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 761 -RIKNYNVSV--KELNGK----VIFLRKLERGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 E 740
+
Sbjct: 814 K 814
>gi|444321270|ref|XP_004181291.1| hypothetical protein TBLA_0F02310 [Tetrapisispora blattae CBS 6284]
gi|387514335|emb|CCH61772.1| hypothetical protein TBLA_0F02310 [Tetrapisispora blattae CBS 6284]
Length = 911
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 167/613 (27%), Positives = 282/613 (46%), Gaps = 82/613 (13%)
Query: 191 HPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--C 248
+ S G + + ++ +++ T ++LL +W P+ D+ + R + + L
Sbjct: 256 NKSDQGKNKKDKSENILDLLDHTSTEAAKKLLISWLKYPLSDIRKIRKRHSVLKTLLEKT 315
Query: 249 SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISE 308
+ + +K + +I IL + S + + W K + S + + K+ E +
Sbjct: 316 NSNYFEDICSEIKNIINIQPILNQIFSGNISFIK--WKKLKKFLVSSIKLYKLIECLYLD 373
Query: 309 SLREQL--RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
+ + L +L + +E L + + + ID S+ + ++ E +L
Sbjct: 374 NATDSLFANILQYSQIEV--------LEIILDEIQRTIDFENSQNSNH-LVINEDINAQL 424
Query: 367 DELRQIYEELPEFLEEVAS------LELVQLPH----LCKEMFVPCIVYIHQIGYLMCIF 416
DE R IY +L L +A LE ++ H + +V I YI Q+GYL+ +
Sbjct: 425 DEFRNIYNQLENILGSLAEEVQMKLLEELEESHSFSNTLNDHYVNAI-YIPQLGYLLTV- 482
Query: 417 EEKLDDTTLEQL---QGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
D +LE+L F+ + ++ + ++Y T LDN GD+Y + D+E +
Sbjct: 483 -----DNSLEELLTKSSFQKEWKEIFRTSTNIYYKNEFTETLDNEYGDVYGNLSDLEIEV 537
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE-PLLDIQNGRHV 532
+ L I + L + +F ELD FLSLA V+ + NY P+L + L+DI+ GRH
Sbjct: 538 LQKLSDCIRNYRTILTQFSDFVIELDVFLSLARVSQERNYTEPLLVDDCCLIDIKKGRHP 597
Query: 533 LQEMTVDTFIPNDTRIDNDG-------------------------RINIITGPNYSGKSI 567
L E V+++I NDT I N G RI ++TG N SGKS+
Sbjct: 598 LYENFVESYITNDTYI-NGGTFNTSTNITENASNIQQTQNPSSYQRIVLLTGANASGKSV 656
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLR 619
++ Q+ LIVFL+ IG +VPA+ A + + D + + +S+F D Q+ L
Sbjct: 657 FLTQIGLIVFLAQIGCYVPAEMAKLSVVDKILTNIKSQETLYTFESTFERDSKQMSKCLH 716
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
AT +SL L+DE+GKGT DG + GG + P ++ TH EL L K+
Sbjct: 717 SATERSLVLIDEYGKGTDMVDGPAIFGGILKSLSKDKNCPLIIASTHFHELFKPSILGKN 776
Query: 680 -ERLKFYTMSVLRPE-----------NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
+KFY +L + N ST I FLYR++ G S+G++CA L G+
Sbjct: 777 IAGIKFYQTEILLQDISQNKHIYISSNISTLDIGITFLYRILEGITERSFGIYCAKLCGI 836
Query: 728 PAEVIKRAAYVLE 740
P +I+R +++
Sbjct: 837 PISIIQRGEKLMK 849
>gi|251796615|ref|YP_003011346.1| DNA mismatch repair protein MutS [Paenibacillus sp. JDR-2]
gi|247544241|gb|ACT01260.1| DNA mismatch repair protein MutS [Paenibacillus sp. JDR-2]
Length = 900
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 295/608 (48%), Gaps = 77/608 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N+++ LD L++ +T + R+K+G S+ ++++ T MG RLLR W +P
Sbjct: 254 NQYMILDHYTRRNLELTETVRD-------RSKKG-SLLWLLDRTQTSMGARLLRRWIDKP 305
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK--FNSPSFIYTASDWTA 287
+L+ + R A+ + + L +V D+ ++ + F S + D A
Sbjct: 306 LLNRSKIEERYEAVDALYRNLIARDDIRSELNHVYDLERLVGRVAFGSAN----GRDMNA 361
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
SI + ++ SE LR+ +V+ C ++LA + E VI
Sbjct: 362 LRSSIRRTPQLVELARQAGSERLRQ--------LVDGLDDC--SDLADLIETVIVDEPPV 411
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
+E G L+R G+ D LD+LR+ ++L E+ +E I I
Sbjct: 412 SIRE---GGLIRAGYDDYLDQLREASTNGKKWLAELER----------REREATGIKTI- 457
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----YHTPKTRELDNLLGDI 462
+IG+ K+ LE +G + E K+ + TP+ +E + L+ +
Sbjct: 458 KIGF------NKVFGYYLEVSKGALGLLPEGRYERKQTLANAERFVTPELKEKERLILEA 511
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
K++D+E A +L H+ L L + AELD + SLA V+ + ++RP++T +
Sbjct: 512 EDKMVDLEYARFIELRDHLALQLHRLQRLAEVVAELDVYQSLATVSAERRFVRPVITDQY 571
Query: 523 LLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLS 579
L I+ GRH + E +D FI N T + + + + +ITGPN +GKS Y++QVALI ++
Sbjct: 572 NLVIEEGRHPVVEAVMDGVPFINNATSLRQEEQSMLLITGPNMAGKSTYMRQVALICIMA 631
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
IG FVPA A + + D + + QS+FM+++ + +M +AT+ SL ++DE
Sbjct: 632 QIGCFVPAKTAEIPMIDRIFTRIGAADDLIGGQSTFMVEMKDIQLMTEKATASSLVIIDE 691
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVL 690
G+GT T +G+ + I FV + K LV TH EL + E LPK L M+V
Sbjct: 692 LGRGTSTSEGMSIAQAVIE-FVHHHIGCKALVSTHFHELSHLEASLPK---LANACMAV- 746
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
S D + FL +L+PG A SYG++CA LAG+P +I RA +LE H+E
Sbjct: 747 ---QESGD--HVTFLRKLIPGAASTSYGIYCARLAGLPNSIIDRAYVLLE------HLEE 795
Query: 751 WSHENISA 758
+ E + A
Sbjct: 796 EASEKLPA 803
>gi|154493322|ref|ZP_02032642.1| hypothetical protein PARMER_02659 [Parabacteroides merdae ATCC
43184]
gi|154086532|gb|EDN85577.1| DNA mismatch repair protein MutS [Parabacteroides merdae ATCC
43184]
Length = 870
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 177/642 (27%), Positives = 302/642 (47%), Gaps = 82/642 (12%)
Query: 137 LAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMG 196
L V+ + I+ L+Q + + S I S+ + +++++LD +L++ T
Sbjct: 220 LGVVASGAILYYLDQTQHTHIS-HITSLSRIEEDRYVRLDKFTVRSLELVST-------- 270
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
+EG S+ +++K V+PMG R+LR W L P+ D++ ++ R + + +F E+ L
Sbjct: 271 --MNEEGTSLLDVLDKTVSPMGSRMLRRWILFPLKDVKPIHERQDVVEYFFRHPEVKELL 328
Query: 257 HETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISES 309
E L+ + D+ I+ K SP + A +K C+ + +G
Sbjct: 329 EEKLEQIGDLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACTASDEPSLCRIG---- 384
Query: 310 LREQLRL--LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELD 367
EQL L D +EK + L +NR G ++ G ELD
Sbjct: 385 --EQLNACALIRDRIEKEINNDPPSL------------LNR------GGVIATGVNAELD 424
Query: 368 ELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL 425
ELR I ++L +V + E L + L I + + GY + + D
Sbjct: 425 ELRAIAYSGKDYLLKVQAREIDLTGISSLK-------IGFNNVFGYYIEVRNAYKDKVPA 477
Query: 426 EQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFS 485
E ++ ++ Y T + +E + + KIL +E + +LV + +
Sbjct: 478 EWIRKQTLVNAER--------YITEELKEYEEKILGAEEKILSLEARLFNELVLCLSEYI 529
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFI 542
+ N LDC LS A VA N Y+RP + ++DI+ GRH + E + + +I
Sbjct: 530 PPIQMNANLIGRLDCLLSFAKVAESNRYIRPDVNDSQVIDIKAGRHPVIEKQLPIGEPYI 589
Query: 543 PNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD----- 596
ND +D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA+ A +G+ D
Sbjct: 590 ANDVYLDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAECARIGIVDKIFTR 649
Query: 597 ---SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV 653
S +++ +S+FM+++++ +L +S+SL L DE G+GT T DGI + + Y
Sbjct: 650 VGASDNISVGESTFMVEMNEASDILNNMSSRSLVLFDELGRGTSTYDGISIAWAIVEYIH 709
Query: 654 T-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGH 712
+ K L TH E LNE +R+K Y +SV N ++FL +LVPG
Sbjct: 710 EHPNARAKTLFATHYHE-LNE-MEASFKRIKNYNVSVKEVNNK------VIFLRKLVPGG 761
Query: 713 ALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
+ S+G+H A +AG+P ++KR+ +L+ + E + E
Sbjct: 762 SEHSFGIHVAKMAGMPKSIVKRSNEILKQLETENRQEGIATE 803
>gi|357058861|ref|ZP_09119707.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
gi|355373207|gb|EHG20528.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
Length = 864
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 271/584 (46%), Gaps = 66/584 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++F +++ TPMG RLL+ W P+L +++RL A++ + + L SL E L+ V
Sbjct: 286 TLFDVLDFTRTPMGTRLLKAWLEHPLLTPHRIDARLGAVAELVENAPLRGSLREHLRSVY 345
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESL-REQLRLLNFDIVE 323
D +L + + + A D A S+ +L V +I + L R + FD +
Sbjct: 346 DFERLLTRIETQT--ANARDLVALRVSLAALPAVREILGTAATSLLTRAHASIETFDDLR 403
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
T E A V E + + D G ++R G+ LDEL + L+E+
Sbjct: 404 N-----TLERAIVDEPGLSVRD---------GGIIRAGYDAALDELHAFSHDSKALLQEM 449
Query: 384 ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK 443
E + + I Y GY + + D + ++ A T+
Sbjct: 450 EERE-----RMRTGIKTLKIGYNKVFGYYIEVRHSGRDQVPADYIRKQTLA------NTE 498
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA---AELDC 500
R K E +LG KI +E I +L + L+ N A A +D
Sbjct: 499 RFITEELKAFEA-KILG-AQEKITALEYHIFTELREQV---RAQLVPIQNVARAIARVDV 553
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDG-RINII 557
SLA A Y+RP +T + I++GRH L E + + F+PNDT + + G +I
Sbjct: 554 LQSLAKAAANYRYVRPQVTTNGAILIRDGRHPLVERLLQREVFVPNDTDLSHGGTETMLI 613
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++QVAL+ ++ IGSFVPA AA + D S + + QS+FM+
Sbjct: 614 TGPNMAGKSTYMRQVALLTLMAQIGSFVPARAAEIAPVDRIFTRIGASDDLVSGQSTFMV 673
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH--- 666
++++V +LR+AT SL +LDE G+GT T DG+ + + + + + K L TH
Sbjct: 674 EMNEVAQILREATKDSLVILDEIGRGTSTFDGMSIARAVVEH-IDKYIHAKTLFATHYHE 732
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
LTE+ N ER++ Y ++V N + FL R+V G A SYG+H A LAG
Sbjct: 733 LTEMEN-------ERIRNYCIAVREKGKN------VAFLRRIVAGAADKSYGIHVARLAG 779
Query: 727 VPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKM 770
+P +V RA +L A + + + I A + Q E M
Sbjct: 780 LPPKVTARAEEILHALEQKESASAGA--EIPAANTQEMPPAEGM 821
>gi|148264432|ref|YP_001231138.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
gi|189030727|sp|A5G447.1|MUTS_GEOUR RecName: Full=DNA mismatch repair protein MutS
gi|146397932|gb|ABQ26565.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
Length = 872
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 173/615 (28%), Positives = 293/615 (47%), Gaps = 61/615 (9%)
Query: 149 LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFG 208
L++ + G A ++S+I + ++L LD + L++ T + K S+ G
Sbjct: 246 LQETQKGRAG-HVNSIIPYTNREYLVLDESTRRNLELTAT--------LAEGKRKGSLLG 296
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
+M++ T MG R ++ W P++ ++++ R +AI F+ +L L V D+
Sbjct: 297 LMDRTTTAMGGRKMKQWINYPLVTIQSITERQDAIEEFVQDPSRRTALVFLLNGVYDLER 356
Query: 269 ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAA 326
+ + + S A D A +S+ + + ++ S LR LN D+V A
Sbjct: 357 LNGRISLAS--AGAKDLVAMKESLARIPGIKELLASSSSVLLRRLNEGLNPLPDLVGLIA 414
Query: 327 SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASL 386
I +V G ++ +G+ ELDELR I E F +A L
Sbjct: 415 GGIVENPPFVLR---------------DGGIIADGYNAELDELRAISREGKGF---IARL 456
Query: 387 ELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
E + I Y GY + + + L + ++ A ++
Sbjct: 457 EAQEKGRTGINSL--KIRYNKVFGYYIEVTKTNLTSIPADYIRKQTLANAER-------- 506
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
Y TP+ +E ++ + +I ++E ++ +++ + + + + + A LD SLA
Sbjct: 507 YITPELKEYEDKVLGAEDRIRELEFSLFQEIRETVTGHGEIVARTADCLATLDVLASLAE 566
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRH-VLQEM-TVDTFIPNDTRIDN-DGRINIITGPNYS 563
+AH+ NY RP++ L I GRH V++ M + F+PNDT +DN + ++ IITGPN +
Sbjct: 567 LAHERNYCRPLVDDGTTLFISEGRHPVIEAMHQGERFVPNDTLLDNGENQLIIITGPNMA 626
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS +++QVALI ++ +GSFVPA A + L D S ++ QS+FM+++ +
Sbjct: 627 GKSTFMRQVALITLMAQMGSFVPATEAHISLVDRIFTRVGASDNLARGQSTFMVEMMESA 686
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLNEG 674
+LR AT +SL +LDE G+GT T DG+ + + D K L TH EL
Sbjct: 687 NILRHATPKSLVILDEIGRGTSTFDGVSIAWAVAEFLHDNDKHAAKTLFATHYHELTELA 746
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
K R+K + ++V E N E I+FL ++V G A SYG+ A LAG+P EVI+R
Sbjct: 747 VTRK--RIKNFNIAV--KEWN----EQIIFLRKIVSGGASHSYGIQVARLAGLPLEVIER 798
Query: 735 AAYVLEAAQNNKHVE 749
A +L+ + + E
Sbjct: 799 AKEILQNLEKGEFAE 813
>gi|117924747|ref|YP_865364.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
gi|189083157|sp|A0L7L5.1|MUTS_MAGSM RecName: Full=DNA mismatch repair protein MutS
gi|117608503|gb|ABK43958.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
Length = 868
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 267/555 (48%), Gaps = 62/555 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMA--SLHETLKY 262
S+ G+M++C+TPMG RLL W RP+ L+ + +R ++S+ E L+A L E L+
Sbjct: 290 SLLGVMDRCITPMGSRLLAQWINRPLQSLDAIATRQESVSWL--RENLVAYQDLRERLRM 347
Query: 263 VKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLLHVNKIFEV--GISESLREQLRLL- 317
V D L++F S + AS D +++ L + I G S ++ LR+L
Sbjct: 348 VHD----LERFLSRIALRRASPRDLGGLRQTLQCLPQLYAILTPADGHSLAVPSLLRILA 403
Query: 318 -NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+F+ E + +LA EL + + + G +R GF LD LR + +
Sbjct: 404 DHFNGHEALTKQLEQQLAD--ELPLNLKE---------GETIRLGFDQTLDTLRSLSRDG 452
Query: 377 PEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
+L EV E +P L I Y GY M + + LD +Q
Sbjct: 453 KSYLTKLEVEEREKTGIPSLK-------IKYHRSFGYSMEVTKTHLDKVPPRYIQRQTM- 504
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
T + Y T + +E + L ++L+ E+ + L + ++ L +
Sbjct: 505 -------TNGVRYVTEELKEYEEQLLTAEERMLEREQLLFEALAEQVARQAETLQASARA 557
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRIDNDGR 553
A LD + A +A + NY RP+L +++I GRH + E DT F+ ND R+DN R
Sbjct: 558 IATLDVLANFAHIAEERNYCRPLLHEGAVIEINQGRHPVVEQFSDTPFVANDIRLDNRQR 617
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
+ITGPN +GKS ++QVALIV L+H G+ VPA +A +G D S + +S
Sbjct: 618 TGLITGPNMAGKSTLMRQVALIVLLAHTGACVPAGSAKIGRVDRIFTRVGASDDLAGGRS 677
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVC 664
+FM+++ + +L A+ +SL +LDE G+GT T DG+ + + T C + L
Sbjct: 678 TFMVEMTETAHILHHASERSLVILDEIGRGTSTYDGLSIAWAVAEHIHTQCQA--RTLFA 735
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL +S+ + ++V E + I+FL+ +V G A SYG+H A L
Sbjct: 736 THYHELTQL----ESQLDGVFNLTVEVKEWK----DQILFLHTIVRGAADRSYGIHVAQL 787
Query: 725 AGVPAEVIKRAAYVL 739
AG+P V +RA VL
Sbjct: 788 AGLPRAVTRRAREVL 802
>gi|120434623|ref|YP_860313.1| DNA mismatch repair protein MutS [Gramella forsetii KT0803]
gi|189030728|sp|A0LXZ7.1|MUTS_GRAFK RecName: Full=DNA mismatch repair protein MutS
gi|117576773|emb|CAL65242.1| DNA mismatch repair protein MutS [Gramella forsetii KT0803]
Length = 871
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 273/555 (49%), Gaps = 54/555 (9%)
Query: 200 AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHET 259
A ++ +++K ++PMG RLL+ W P+ D E + RL + F + + E++A++ +
Sbjct: 283 AANAVTLLDVIDKTISPMGGRLLKRWLALPLKDAEMIEKRLQVVDFLIKNPEILANIQDQ 342
Query: 260 LKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRL 316
++ + D+ ++ K + + + S+ +++ V ++ +E+L+ + L
Sbjct: 343 IREISDLERLISKVATQKI--SPREVNQLKNSLNAIIPVKELALKCNNEALKIIGDNLHS 400
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+ + EK + I+ + + + G ++ GF ELDELR +
Sbjct: 401 CDL-LREKISESISEDAPVLIQ---------------RGGVIASGFSSELDELRGLAFSG 444
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
++L+++ E + + VY GY + + D E + +
Sbjct: 445 KDYLDKMIQRE-TEKTGISSLKIGSNNVY----GYYIEVRNTHKDKVPEEWTRKQTLVNA 499
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ Y T + +E ++ + KIL +E+ + L++ + + D + + A
Sbjct: 500 ER--------YITEELKEYESKILGAEEKILHLEQELFGKLIAWMAEYIDPVQQNARLIA 551
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-G 552
LDC S A A NY +P +T +DI+ GRH + E + + ++ N+ +D +
Sbjct: 552 RLDCLCSFAQQAQAENYSKPEITDSYGMDIEEGRHPVIEKQLPPGEVYVTNNLHLDREEQ 611
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
+I +ITGPN SGKS ++Q ALIV ++ +GSFVPA +A +GL D S +++ +
Sbjct: 612 QIIMITGPNMSGKSAILRQTALIVLMAQMGSFVPARSAEIGLVDKIFTRVGASDNISMGE 671
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++++ +L + +SL LLDE G+GT T DGI + Y PK L
Sbjct: 672 STFMVEMNETASILNNISDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKPKTLFA 731
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH E LNE C ER+K + +SV ++N ++FL +LVPG + S+G+H A +
Sbjct: 732 THYHE-LNEMC-ETFERIKNFNVSVKELKDN------VLFLRKLVPGGSEHSFGIHVAKM 783
Query: 725 AGVPAEVIKRAAYVL 739
AG+P V+ RA +L
Sbjct: 784 AGMPQMVLHRANKIL 798
>gi|288801817|ref|ZP_06407259.1| DNA mismatch repair protein MutS [Prevotella melaninogenica D18]
gi|288335859|gb|EFC74292.1| DNA mismatch repair protein MutS [Prevotella melaninogenica D18]
Length = 886
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 165/626 (26%), Positives = 295/626 (47%), Gaps = 82/626 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ +TPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGSSLLNVIDNTITPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + ++E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDEKPINERLDVVDYLFREPDFRECINEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K+ C + + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTACLYAKSDTLKRIGEQLNLCESLR----DRIEKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
VN+ G ++ GF ELD+LR I + ++L E+ E+ Q
Sbjct: 434 ------------VNK------GDVIALGFNQELDDLRSIRDNGKQYLLEIQEKEIAQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ I + + GY + + F++K+ + + + + +R Y TP
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPENWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KIL +E + +L+ + F + N A LDC LS V+
Sbjct: 520 ELKEYEEKILGADEKILALETQLYMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQL 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKS 566
Y+RP++ ++DI+ GRH + E + + ++PND +D + +I +ITGPN +GKS
Sbjct: 580 QRYVRPVVDDSEVIDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCL 676
TS+SL L DE G+GT T DGI + + Y + L TH EL E
Sbjct: 700 NNVTSRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSRAQARTLFATHYHELNEMEKNF 759
Query: 677 PKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
P R+K + +SV + I+F+ +L G + S+G+H A +AG+P ++KRA
Sbjct: 760 P---RIKNFNVSVKEVDGK------IIFVRKLEKGGSEHSFGIHVAEIAGMPRSIVKRAN 810
Query: 737 YVL-EAAQNNKHVERWSHENISAQDQ 761
+L E ++N V + DQ
Sbjct: 811 IILKELEKDNSQVGSVGKAAVERLDQ 836
>gi|313204209|ref|YP_004042866.1| DNA mismatch repair protein muts [Paludibacter propionicigenes WB4]
gi|312443525|gb|ADQ79881.1| DNA mismatch repair protein MutS [Paludibacter propionicigenes WB4]
Length = 870
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 290/569 (50%), Gaps = 74/569 (13%)
Query: 198 GRAKEGF-SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
G EG ++ +++K ++PMG R+L+ W P+ D++ +N RL+ + F + +L L
Sbjct: 279 GSINEGARTLLDVIDKTISPMGARMLKRWIAFPLKDVKPINERLSVVEHFFKNPDLKLLL 338
Query: 257 HETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE 312
+ + + D+ I+ K +P + LK+I + ++ S+S +
Sbjct: 339 EQNVALIGDLERIISKVAVGRINPREVV---QLKVALKAIEPI-------KLACSQSDND 388
Query: 313 QLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
LR I ++ +C A + E + ID + G +++ G ELDELRQ+
Sbjct: 389 TLR----KIADQLNAC-----AVISEKIDKEIDNDPPNFIHRGGVLKSGVDAELDELRQL 439
Query: 373 YEELPEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI---FEEKLDDTTLEQ 427
+FL+++ E E +P I + + GY + + ++K+ +T + +
Sbjct: 440 AYSGKDFLQKIQERE-------SAETGIPSLKISFNNVFGYYIEVRNMHKDKVPETWIRK 492
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
Q A +R K E + +LG KIL +E + DLV + +
Sbjct: 493 -QTLVNA--------ERYITQELKVYE-EKILG-AEEKILSIEIRLFNDLVLSLVDYITA 541
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPN 544
+ N A+LDC LS V+ +N Y+RP +T +L+I+ GRH + E + +++I N
Sbjct: 542 IQLDSNLIAQLDCLLSFTRVSSENKYVRPQVTDTDVLEIKQGRHPVIEKQLPIGESYIAN 601
Query: 545 DTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
D +DN+ +I IITGPN SGKS ++Q A+I ++ IG FVPA++A++G+ D
Sbjct: 602 DVYLDNETQQIIIITGPNMSGKSALLRQTAIITLMAQIGCFVPAESASIGVVDKIFTRVG 661
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF--- 652
S +++ +S+FM+++++ +L +++SL L DE G+GT T DGI + + Y
Sbjct: 662 ASDNISQGESTFMVEMNEAASILNNLSNRSLVLFDELGRGTSTYDGISIAWAIVEYIHEQ 721
Query: 653 VTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPG 711
V+C K L TH E LNE + KS R+K Y +SV + + ++FL +LV G
Sbjct: 722 VSCKA--KTLFATHYHE-LNE--MEKSFHRIKNYNVSVKEVD------KKVIFLRKLVRG 770
Query: 712 HALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ S+G+H A +AG+P ++KR+ +L+
Sbjct: 771 GSEHSFGIHVAKMAGMPQSIVKRSEQILK 799
>gi|169350633|ref|ZP_02867571.1| hypothetical protein CLOSPI_01405 [Clostridium spiroforme DSM 1552]
gi|169292687|gb|EDS74820.1| DNA mismatch repair protein MutS [Clostridium spiroforme DSM 1552]
Length = 837
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 176/624 (28%), Positives = 299/624 (47%), Gaps = 69/624 (11%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E+ N++L +D +AL++ K G S++ ++++ T MG RLL+ W
Sbjct: 238 EIDNNEYLTMDIYTRKALELTANSKSNEKYG--------SLYWLLDQTKTAMGSRLLKQW 289
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP++ + + RL+ + F + S+ E LK + D+ + + + A D
Sbjct: 290 IERPLISQDKIEKRLDIVEIFTNNFIQRESIKEILKDIYDLERLSSRIAFGNI--NARD- 346
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
LK I + L V I E L+ QL +N ++++ A+ + +L ++ ELV I
Sbjct: 347 ---LKWISNSLKV-------IPE-LKGQLLSINEPLLDELANRLV-DLNHICELVDKAII 394
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCI 403
N G ++++GF +ELDELR I + ++L E E + L I
Sbjct: 395 DNPPLTVKDGGIIKDGFNEELDELRYIRDHGKQWLANFEQKEREKTGIKGLK-------I 447
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + + L L EF ++ + TP+ +E+++ L
Sbjct: 448 GYNRVFGYYIEVTKANL------SLVKDEFNYTRKQSLANAERFVTPELKEMESKLLSAQ 501
Query: 464 HKILDMERAI---TRDLVSHICLFSDHLLKAV-NFAAELDCFLSLALVAHQNNYMRPILT 519
K++ +E + RD + + H+L+ V A +D + S+A+++ +N+Y+RP+
Sbjct: 502 DKMIKLEYVLFTQIRDYIKNDV----HVLQDVAKIVAMVDVYQSMAVLSSENSYVRPVFN 557
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
E L I +GRH + E M+ T++ ND ID + + +ITGPN GKS Y++Q+ALI
Sbjct: 558 QEKTLKIVDGRHGIIEKVMSQRTYVSNDIDIDKESPVLLITGPNMGGKSTYMRQIALIAL 617
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
+ IG FVP A + + D S + + QS+FM+++ + LR AT SL +
Sbjct: 618 MGQIGCFVPCSMANIPIFDQIFTRIGASDDLISGQSTFMVEMLEANNALRYATENSLIIF 677
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTM 687
DE G+GT T DG+ + I Y T + L TH EL L E L +K
Sbjct: 678 DEIGRGTATFDGMAIAQSMIEYIATS-IKCITLFSTHYHELTFLEEKNLG----IKNVHA 732
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
S S + +++VFLYR+ PG + SYG++ A LA +P ++ RA +L++ + N
Sbjct: 733 SA------SIENDNLVFLYRIKPGRSNKSYGINVAKLAKLPDAILNRANTLLKSLEENNI 786
Query: 748 VERWSHENISAQDQQYKNAVEKML 771
S + + ++ VEK L
Sbjct: 787 EHHLSSDKVKEAPIVTRSEVEKYL 810
>gi|365830823|ref|ZP_09372386.1| DNA mismatch repair protein MutS [Coprobacillus sp. 3_3_56FAA]
gi|374627242|ref|ZP_09699649.1| DNA mismatch repair protein MutS [Coprobacillus sp. 8_2_54BFAA]
gi|365262833|gb|EHM92705.1| DNA mismatch repair protein MutS [Coprobacillus sp. 3_3_56FAA]
gi|373913265|gb|EHQ45103.1| DNA mismatch repair protein MutS [Coprobacillus sp. 8_2_54BFAA]
Length = 836
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 288/616 (46%), Gaps = 53/616 (8%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E++ ++ +D +AL++ + K G S+F ++++ T MG R+L+ W
Sbjct: 238 EINNEDYVTMDLYTKKALELTSSAKSNDKYG--------SLFWLLDQTKTAMGSRMLKQW 289
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP+++ E + RL+ + F S+ E LK + D+ + + + A D
Sbjct: 290 IERPLINQEQIEERLDIVEIFTNHFIQRESIKEILKDIYDLERLSSRIAFGNI--NARD- 346
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
LK I S L V L+ QL L+ ++ A T +L+++ L+ I
Sbjct: 347 ---LKWISSSLKV--------VPELKNQLLSLDEPLISALADHFT-DLSHITNLIDQAIV 394
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
N G L++EGF +ELDELR I + ++L + E + K + V Y
Sbjct: 395 DNPPLTVKEGNLIKEGFNEELDELRYIRDHGKQWLAQFEQNERDKTG--IKGLKVG---Y 449
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + + + L L EF ++ + + TP+ +E+++ L K
Sbjct: 450 NRVFGYYIEVTKGNL------SLVKDEFNYTRKQSLSNAERFVTPELKEMESKLLSAQDK 503
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
++ +E A+ ++ ++I + A++D F SLA+++ +N+Y+RP +
Sbjct: 504 MIKLEYALFTEIRNYIKKDVHAIQDVAKIIAKIDVFQSLAMISSENSYVRPTFNHNKVFK 563
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ +GRH + E M T++ ND ID + +ITGPN GKS Y++ +ALI + IG
Sbjct: 564 VVDGRHGVIERVMAQGTYVSNDVNIDAANPVMLITGPNMGGKSTYMRTIALIALMGQIGC 623
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVP A + + D S + + QS+FM+++ + LR AT SL + DE G+G
Sbjct: 624 FVPCSEACIPIFDQIFTRIGASDDLISGQSTFMVEMLEANNALRFATENSLIIFDEIGRG 683
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T T DG+ + I Y + + L TH EL + + L + +
Sbjct: 684 TATFDGMAIAQAMIEY-IAAKIKCITLFSTHYHEL----TFLEEKNLGIKNVHA----SA 734
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
S + +D+VFLYR+ PG + SYG++ A LA +P V+ RA +LEA + N S +
Sbjct: 735 SIENDDLVFLYRIKPGRSNKSYGVNVAKLAKLPDAVLNRANVLLEALEENNIEHHLSDDT 794
Query: 756 ISAQDQQYKNAVEKML 771
+ + VEK L
Sbjct: 795 LKEAPPVTVSVVEKYL 810
>gi|260102903|ref|ZP_05753140.1| DNA mismatch repair protein HexA [Lactobacillus helveticus DSM
20075]
gi|417015925|ref|ZP_11946959.1| DNA mismatch repair protein MutS [Lactobacillus helveticus MTCC
5463]
gi|260083292|gb|EEW67412.1| DNA mismatch repair protein HexA [Lactobacillus helveticus DSM
20075]
gi|328462816|gb|EGF34683.1| DNA mismatch repair protein MutS [Lactobacillus helveticus MTCC
5463]
Length = 865
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 168/592 (28%), Positives = 283/592 (47%), Gaps = 73/592 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 249 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L ++ + LK V D+ + +
Sbjct: 301 PLLNVDIINHREKMVQALLDGYFTRENIIDALKGVYDLERLTGRI--------------- 345
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI---ID 345
+ +VN + +S SL+ +L D + ++ S + T+ A + + G+ I
Sbjct: 346 -----AFGNVNARELLQLSRSLQAVPVIL--DALNQSDSDVLTDFAKKIDPLKGVAELIS 398
Query: 346 VNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
K+ G L+R+G +LD R ++L ++ + E K
Sbjct: 399 TTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDER------QKTGIEN 452
Query: 402 CIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
V +++ GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 453 LKVGFNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLIL 505
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-T 519
+ + D+E + L + + L K N A LD + S A VA QNNY RP T
Sbjct: 506 EAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCSFATVAEQNNYCRPSFHT 565
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+D+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI
Sbjct: 566 DSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAI 625
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 626 MAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLF 685
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY-TMS 688
DE G+GT T DG+ L G + Y + V K L TH EL + E L + +
Sbjct: 686 DEIGRGTATYDGMALAGAIVKY-LHDKVGAKALFATHYHELTS-----LDETLDYLKNIH 739
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 740 VGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRTVLREATKLLK 787
>gi|333923601|ref|YP_004497181.1| DNA mismatch repair protein mutS [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749162|gb|AEF94269.1| DNA mismatch repair protein mutS [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 873
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 188/727 (25%), Positives = 337/727 (46%), Gaps = 100/727 (13%)
Query: 67 ALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLI----YLRVTGMDDGLSIKERICYLNSMM 122
+K+S E T+ + IF+ EQA L + T +D C+ + +
Sbjct: 185 GVKKSFQELEGTTITSLADQIFTQEQAQQALTEHFGQAKTTALD---------CWQSPAV 235
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
A+GGLL L LE ++ IT + ++ LD A
Sbjct: 236 -------CGAAGGLLHYL--------LETQKRKLQHIT--EITSYFTQSYMILDGIARRN 278
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I ++ + G S+ +++ + MG R+L+ W +P++D++ +N RL+A
Sbjct: 279 LEICKSLRDGGKKG--------SLLSVLDLTRSAMGGRMLKAWLEQPLIDIKAINERLDA 330
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ + S L L LK V D+ + + S A D A L S+ L + +
Sbjct: 331 VQELVDSVLLRDELATALKNVYDMERLTARAAYGS--ANARDMLALLASLQMLPPLRQAL 388
Query: 303 EVGISESLREQLRLLN-FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
S+ L+ R+ + FD +E + + +A + I + D G L++ G
Sbjct: 389 TNCQSKLLK---RIYDQFDTLEDLKGLLESSIAE--DAPITLRD---------GGLIKAG 434
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
+ E+D+LR + + +L + S E + K + V + GY + + + L+
Sbjct: 435 YSQEVDQLRAVARDGKSWLAGLESREKEKTG--IKSLKVG---FNKVFGYYLEVTKANLN 489
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
L + +R TP+ +E ++++ +++++E + D+ + +
Sbjct: 490 ------LVPEYYQRRQTLANAERFI--TPELKEYESMILGAEDRLVELEYNLFVDVRNQV 541
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT- 540
+ A++D ++LA VA + Y+RP + +++I GRH + E+ +
Sbjct: 542 AAEVSRIQHTALLVAQVDVLVALAEVAARQGYVRPEVNNSGVIEITEGRHPVVEINLGPG 601
Query: 541 -FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
F+PNDT ID D R+ +ITGPN GKS Y +QVALIV ++ +GSFVPA A++G+ D
Sbjct: 602 CFVPNDTYIDTDRHRLALITGPNMGGKSTYQRQVALIVLMAQVGSFVPASKASIGIVDRI 661
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +T+ QS+FM+++ + ++ ATSQSL ++DE G+GT +G+ + I
Sbjct: 662 FARVGASDDLTSGQSTFMVEMLETKQIMDHATSQSLVIIDELGRGTSNLEGMAIAQAVIE 721
Query: 651 YF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+ V C + L TH EL EG L LK Y +V +++ FL
Sbjct: 722 FLHDVVGC----RTLFSTHYHELAELEGRLAG---LKNYATAV------KEQGDEVTFLR 768
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
+++ A SYG+HCA LAG+P ++I+RA +++ + N+ + + + A Q +
Sbjct: 769 KVIRDQASKSYGIHCARLAGLPGQIIQRANQLVQQLEFNQR----AAQEVVAGKTQVAAS 824
Query: 767 VEKMLAF 773
VE++ F
Sbjct: 825 VEQLALF 831
>gi|224023432|ref|ZP_03641798.1| hypothetical protein BACCOPRO_00132 [Bacteroides coprophilus DSM
18228]
gi|224016654|gb|EEF74666.1| hypothetical protein BACCOPRO_00132 [Bacteroides coprophilus DSM
18228]
Length = 878
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/582 (27%), Positives = 279/582 (47%), Gaps = 59/582 (10%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G S+ +++ ++PMG RLL+ W + P+ D++ +N RL+ + +F + + E L
Sbjct: 287 GTSLLDVIDHTISPMGARLLKRWIVFPLKDVKPINERLDVVEYFFREPDFKDFIEEKLHL 346
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNF 319
+ D+ I+ K + + ++ ++ + + +ESLR EQL L
Sbjct: 347 IGDLERIVSKAAVGRI--SPREVVQLKVALQAIEPIKNACQNAENESLRRIGEQLNLC-V 403
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
I +K A I + + VN+ G ++ +G +ELDELR+I ++
Sbjct: 404 SIRDKIAREIKNDPPLL---------VNK------GGVIADGVNEELDELRRIAYSGKDY 448
Query: 380 LEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
L ++ E+ Q +P L I Y + GY + + D E ++ ++
Sbjct: 449 LLQIQQREIEQTGIPSLK-------IAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVNAE 501
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y T + +E + + KIL +E + +LV + F + A
Sbjct: 502 R--------YITQELKEYEEKILGAEDKILILETRLYNELVMALSEFIPAIQINATQIAR 553
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GR 553
LDC LS A VA N Y+RP++ + +LDI+ GRH + E + + +I ND +D + +
Sbjct: 554 LDCLLSFASVAKANRYIRPVVADDDVLDIRQGRHPVIEKQLPLGEKYIANDVYLDTEEQQ 613
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I IITGPN +GKS ++Q ALI ++ IG FVPA++A +GL D S +++ +S
Sbjct: 614 IIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISVGES 673
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVC 664
+FM+++++ +L + +SL L DE G+GT T DGI + + + + L
Sbjct: 674 TFMVEMNEAADILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHKRARARTLFA 733
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + +R+K Y ++V +N ++FL +L G + S+G+H A +
Sbjct: 734 THYHEL--NDMEAQFKRIKNYNVTVKEVDNK------VIFLRKLERGGSEHSFGIHVAKM 785
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
AG+P ++KRA +L + E S +NI + + A
Sbjct: 786 AGMPKTIVKRADEILHQLEAENRQEGISAQNIHTKSKSNATA 827
>gi|323703567|ref|ZP_08115212.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
gi|323531470|gb|EGB21364.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
Length = 873
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 188/727 (25%), Positives = 337/727 (46%), Gaps = 100/727 (13%)
Query: 67 ALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLI----YLRVTGMDDGLSIKERICYLNSMM 122
+K+S E T+ + IF+ EQA + + T +D C+ + +
Sbjct: 185 GVKKSFQELEGTTITSLADQIFTQEQAQQAITEHFGQAKTTALD---------CWQSPAV 235
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
A+GGLL L LE ++ IT + ++ LD A
Sbjct: 236 -------CGAAGGLLHYL--------LETQKRKLQHIT--EITSYFTQSYMILDGIARRN 278
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I ++ + G S+ +++ + MG RLL+ W +P++D++ +N RL+A
Sbjct: 279 LEICKSLRDGGKKG--------SLLSVLDLTRSAMGGRLLKAWLEQPLIDIKAINERLDA 330
Query: 243 ISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF 302
+ + S L L LK V D+ + + S A D A L S+ L + +
Sbjct: 331 VQELVDSVLLRDELATALKNVYDMERLTARAAYGS--ANARDMLALLASLQMLPPLRQAL 388
Query: 303 EVGISESLREQLRLLN-FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
S+ L+ R+ + FD +E + + +A + I + D G L++ G
Sbjct: 389 TNCQSKLLK---RIYDQFDTLEDLKGLLESSIAE--DAPITLRD---------GGLIKAG 434
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD 421
+ E+D+LR + + +L + S E + K + V + GY + + + L+
Sbjct: 435 YSQEVDQLRAVARDGKSWLAGLESREKEKTG--IKSLKVG---FNKVFGYYLEVTKANLN 489
Query: 422 DTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHI 481
L + +R TP+ +E ++++ +++++E + D+ + +
Sbjct: 490 ------LVPEYYQRRQTLANAERFI--TPELKEYESMILGAEDRLVELEYNLFVDVRNQV 541
Query: 482 CLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT- 540
+ A++D ++LA VA + Y+RP + +++I GRH + E+ +
Sbjct: 542 AAEVSRIQHTALLVAQVDVLVALAEVAARQGYVRPEVNNSGVIEITEGRHPVVEINLGPG 601
Query: 541 -FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
F+PNDT ID D R+ +ITGPN GKS Y +QVALIV ++ +GSFVPA A++G+ D
Sbjct: 602 CFVPNDTYIDTDRHRLALITGPNMGGKSTYQRQVALIVLMAQVGSFVPASKASIGIVDRI 661
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S +T+ QS+FM+++ + ++ ATSQSL ++DE G+GT +G+ + I
Sbjct: 662 FARVGASDDLTSGQSTFMVEMLETKQIMDHATSQSLVIIDELGRGTSNLEGMAIAQAVIE 721
Query: 651 YF---VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+ V C + L TH EL EG L LK Y +V +++ FL
Sbjct: 722 FLHDVVGC----RTLFSTHYHELAELEGRLAG---LKNYATAV------KEQGDEVTFLR 768
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNA 766
+++ A SYG+HCA LAG+P ++I+RA +++ + N+ + + + A Q +
Sbjct: 769 KVIRDQASKSYGIHCARLAGLPGQIIQRANQLVQQLEFNQR----AAQEVVAGKTQVAAS 824
Query: 767 VEKMLAF 773
VE++ F
Sbjct: 825 VEQLALF 831
>gi|89092115|ref|ZP_01165070.1| DNA mismatch repair protein [Neptuniibacter caesariensis]
gi|89083850|gb|EAR63067.1| DNA mismatch repair protein [Oceanospirillum sp. MED92]
Length = 854
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 276/584 (47%), Gaps = 74/584 (12%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGF--SVFGMMNKCVTPMGRRLLRNWFL 227
N + LDA + L+I Q GF ++ +++KC TPMG RLLR W
Sbjct: 263 NDCVALDAATRKNLEIDQN-----------LSGGFDNTLAKVIDKCRTPMGSRLLRRWLH 311
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
RPI D L +R +I + L + + + LK + DI IL + S D
Sbjct: 312 RPIQDRATLLARQASIQW-LQNNYKFEEIQKPLKNIGDIERILARIALRS--ARPRDLER 368
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
++ SL L+ QL+ + ++ + A I+ + + +L++ I N
Sbjct: 369 LKSALASL------------PELQSQLKTTDAPLISELAIQIS-QFPELSDLLLKAIIDN 415
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G ++ EGF +ELDELR I E +L E+ + E + + + Y
Sbjct: 416 PPVVIRDGGVIAEGFDEELDELRGISENAGAYLIELETRERER-----TGIATLKVGYNR 470
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + I + + + E ++ ++ Y TP+ +E ++ + L
Sbjct: 471 VHGYFIEIGKAQNAELPAEYIRRQTLKNAER--------YITPELKEFEDKALSAKSRAL 522
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
E+A+ L+ + L + AELD +LA A +Y+ P LT EP + IQ
Sbjct: 523 AREKALYEQLLETLAAELSPLQDSSAAIAELDVLNNLAERASTLDYVPPTLTEEPQIKIQ 582
Query: 528 NGRH-VLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH V++ + D F+ ND +DN+ ++ IITGPN GKS Y++Q ALI L+HIGS+VP
Sbjct: 583 RGRHPVVETVLDDPFVANDLDLDNERKMLIITGPNMGGKSTYMRQAALITLLAHIGSYVP 642
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A AAT+G+ D S + +S+FM+++ + ++ AT++SL L+DE G+GT T
Sbjct: 643 ASAATIGIVDKIFTRMGSSDDLAGGRSTFMVEMTETANIMHNATARSLVLMDEVGRGTST 702
Query: 639 EDGIGL-------LGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLR 691
DG+ L L N F L TH EL + LP + + + +
Sbjct: 703 FDGLSLAWACAENLARETNAF--------TLFATHYFELTS---LP-DQAANVFNVHLTA 750
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
E+N + IVFL+ + G A SYGL A LAGVP VI++A
Sbjct: 751 VEHN----DHIVFLHEVKDGPASQSYGLQVAQLAGVPLNVIEQA 790
>gi|375084995|ref|ZP_09731788.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
gi|374567644|gb|EHR38853.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
Length = 912
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 270/550 (49%), Gaps = 57/550 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
+++ +++ T MG RLLR W P+L + +N RL+A++ + + L +L E LK +
Sbjct: 284 TLYDVLDFTKTAMGSRLLRKWLEYPLLSPKKINDRLDAVANLVSNFSLRNNLREQLKEIY 343
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D +L + + A D A S+ L I +SL + L +I +K
Sbjct: 344 DFERLLTRMEVGTA--NARDMNALKSSLYVL--------PAIKKSLSKATAKLLANIHQK 393
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFL 380
++ Y+ ++ +ID ++ + G +++G+ ELDE R I + L
Sbjct: 394 IST---------YDDLVVLIDKAIVEDPSFSIREGGFIKDGYNQELDEYRNIAKNSKRLL 444
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+++ E + K + I Y GY + + + ++ A ++
Sbjct: 445 QQMEEDEKNKTG--IKSL---KIGYNKVFGYYIEVRHSSTEMVPENYIRKQTLANAER-- 497
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y TP+ +E + + KI+ +E + +L + + + A LD
Sbjct: 498 ------YITPELKEFETKILGAQEKIVQLEYNLFTELRDILKTQISSIQNTAHEIAILDV 551
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINII 557
+SLA + NY+RP L + + I++GRH L E + D F+PNDT +DN I II
Sbjct: 552 LVSLAQAGDEYNYIRPKLLDDGTIHIKDGRHPLVERILNRDLFVPNDTHLDNAQNEIMII 611
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++Q AL+ ++ +GSF+PA A++ D S + + QS+FM+
Sbjct: 612 TGPNMAGKSTYMRQSALLTLMTQVGSFIPAREASISPVDKIFTRIGASDDLVSGQSTFMV 671
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++++V +L+ AT++SL +LDE G+GT T DG+ + I + + + K L TH E
Sbjct: 672 EMNEVSHILKYATNKSLVILDEIGRGTSTYDGMSIARAVIEH-IRDHIGAKTLFATHYHE 730
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L + L +K Y ++V E S D+ FL R++ G A SYG+H A LAG+P
Sbjct: 731 LTD---LEDDVHVKNYCIAV--KEKGS----DVTFLRRIIRGSADKSYGIHVAKLAGLPQ 781
Query: 730 EVIKRAAYVL 739
EV+KRA +L
Sbjct: 782 EVVKRAETIL 791
>gi|313896675|ref|ZP_07830223.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974592|gb|EFR40059.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 137
str. F0430]
Length = 869
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 284/596 (47%), Gaps = 76/596 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N+ LDA A L + + + ++F +++ TPMG RLL++W
Sbjct: 250 INRLSFLDAAAGMQLDTYTLRNLEITRSLRDGGKKHTLFDVLDFTRTPMGTRLLKSWLEH 309
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L +++RL+A++ + + L A L E L+ + D +L + + + A D A
Sbjct: 310 PLLAPHRIDARLDAVAELVSASSLRAKLRELLRSIYDFERLLTRIETQA--ANARDLVAL 367
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
S+ +L V S RLL +AA I T L+ I+D
Sbjct: 368 RVSLAALPGVRAALSGAKS-------RLLT-----RAAEGIETFDDLRELLMAAIVD--- 412
Query: 349 SKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
E G G ++R G+ DELDEL + + L+E+ E + + I
Sbjct: 413 --EPGLSVRDGGIIRMGYSDELDELHRFSHDSKSLLQEMEEHERDR-----TGIKTLKIG 465
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + D + ++ A ++ + T + +E + +
Sbjct: 466 YNKVFGYYIEVRHSGSDRVPADYIRKQTLANAER--------FITEELKEFETKILSAQE 517
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFA---AELDCFLSLALVAHQNNYMRPILTLE 521
KI+ +E ++ +L + + L+ N A A +D S+A A Y+RP++
Sbjct: 518 KIVALEYSLFAELRDRV---KERLVPIQNVARMIARVDVLQSMAEAAASYRYVRPVI--R 572
Query: 522 PLLD----IQNGRHVLQE--MTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVAL 574
P D I++GRH L E + D F+PNDT + + G +ITGPN +GKS Y++QVAL
Sbjct: 573 PASDGEIIIKDGRHPLVERLLERDLFVPNDTHLSHGGTETMLITGPNMAGKSTYMRQVAL 632
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
+ ++ +GSFVPA +A + D S + + QS+FM+++++V +LR+AT SL
Sbjct: 633 LTLMAQVGSFVPARSAEIAPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILREATRDSL 692
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLK 683
+LDE G+GT T DG+ + + + + + K L TH LTE+ N ER++
Sbjct: 693 VILDEIGRGTSTFDGMSIARAVVEH-IDTRIHAKTLFATHYHELTEMAN-------ERIR 744
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
Y ++V R + ++FL R+V G A SYG+H A LAG+P +V +RA +L
Sbjct: 745 NYCIAV-REKGRG-----VMFLRRIVAGAADKSYGIHVARLAGLPPKVTERAEEIL 794
>gi|170288906|ref|YP_001739144.1| DNA mismatch repair protein MutS [Thermotoga sp. RQ2]
gi|238688840|sp|B1LAW3.1|MUTS_THESQ RecName: Full=DNA mismatch repair protein MutS
gi|170176409|gb|ACB09461.1| DNA mismatch repair protein MutS [Thermotoga sp. RQ2]
Length = 793
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 285/602 (47%), Gaps = 68/602 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S ++ LD+ E L + D+ G ++F ++N TPMG RLL+ W
Sbjct: 244 ISQRDYMILDSATVENLSLIPGDR------------GKNLFDVLNNTETPMGARLLKKWI 291
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
L P++D + + RL A+ + + + L V+D+ I+ + + D
Sbjct: 292 LHPLVDRKQIEERLEAVERLVNDRVSLEEMRNFLSNVRDVERIVSRVEYNRSV--PRDLV 349
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +++ + +N+I L NF + K A EL +L+ I+
Sbjct: 350 ALRETLEIIPKLNEI--------------LSNFGVFNKLA--FPEELV---DLLRRAIED 390
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+ G G +++ GF ELDE R + E E L+E E + +++ V Y
Sbjct: 391 DPLGSPGEGKVIKRGFSPELDEYRDLLEHAEERLKEFEEKERERTG--IQKLRVG---YN 445
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + LD +E + ++ E + TP+ +E + + +I
Sbjct: 446 QVFGYYIEVTKANLDKIP----DDYERKQTLVNSER----FITPELKEFETKIMAAKERI 497
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+ME+ + + + + + LLK A++D +LA A NY +P+ + E L+I
Sbjct: 498 EEMEKELFKSVCEEVKKHKEVLLKLSEDLAKMDVLSTLAYDAILYNYTKPVFS-EDRLEI 556
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+ GRH + E F+ ND +DN+ R +ITGPN SGKS +I+QV LI ++ IGSFVP
Sbjct: 557 KGGRHPVVERFTQNFVENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVP 616
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A + + D + +S+F+++++++ ++L ++T +SL LLDE G+GT T
Sbjct: 617 AQKAILPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGTST 676
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
+DG+ + + KVL TH TEL E P+ + ++L E
Sbjct: 677 QDGVSIAWAISEELIKRGC--KVLFATHFTELTELEKHFPQVQ-----NKTILVKEEG-- 727
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
++++F +++V G A SYG+ A +AG+P VI RA +LE N H ++ N
Sbjct: 728 --KNVIFTHKVVDGVADRSYGIEVAKIAGIPDRVINRAYEILERNFKN-HTKKNGKSNRF 784
Query: 758 AQ 759
+Q
Sbjct: 785 SQ 786
>gi|373956737|ref|ZP_09616697.1| DNA mismatch repair protein mutS [Mucilaginibacter paludis DSM
18603]
gi|373893337|gb|EHQ29234.1| DNA mismatch repair protein mutS [Mucilaginibacter paludis DSM
18603]
Length = 869
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 281/595 (47%), Gaps = 83/595 (13%)
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
+++ +PMG R+LR W + P+ + + + RLN + + + EEL L + ++ + D+
Sbjct: 292 VLDHTCSPMGARMLRRWIVMPLKERKPIEDRLNVVEYLIAHEELKEELKQQIRQIGDLER 351
Query: 269 ILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLR--LLNF 319
++ K +P + A T +K ICS + +G EQL +L
Sbjct: 352 LISKIGLQKANPREVVQLKKALAATNVIKGICSQSESAALRTIG------EQLNPCVLIR 405
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
+ +EK + + II G ++ EG +ELD LR+I +
Sbjct: 406 EKIEKELQA---------DPPVMIIK---------GGVIAEGINEELDRLRKIAFGGKGY 447
Query: 380 LEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
L E+ E+ ++P L + + + GY + + D E ++ ++
Sbjct: 448 LLEIQKREAEITRIPSLK-------VAFNNVFGYYLEVSNAHKDKVPTEWIRKQTLVNAE 500
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
Y TP+ +E + + KIL +E + +L+ + + + A+
Sbjct: 501 R--------YITPELKEYEEQILGAEEKILALETRLYNELLYELTQYIKPIQLNAQLVAQ 552
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR- 553
LD L+ A +A +N Y++P + ++DI+ GRH + E + + +I ND +D+D +
Sbjct: 553 LDVLLNFATIAIKNYYVKPDINEGSIIDIKGGRHPVIEKNLPLGEEYITNDVYLDSDSQQ 612
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I IITGPN +GKS ++Q LIV ++ +GSFVPA ATVGL D S ++++ +S
Sbjct: 613 IIIITGPNMAGKSALLRQTGLIVLMAQMGSFVPAKEATVGLVDKIFTRVGASDNLSSGES 672
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVC 664
+FM+++++ +L + +SL LLDE G+GT T DGI + Y K L
Sbjct: 673 TFMVEMNETASILNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEYLHNHPSAKAKTLFA 732
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED----IVFLYRLVPGHALLSYGLH 720
TH E LNE T S R +N + V++ I+FL +LVPG + S+G+H
Sbjct: 733 THYHE-LNE-----------LTNSFHRIKNFNVTVKEVGHKIIFLRKLVPGGSEHSFGIH 780
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDV 775
A LAG+P V+ RA +L+ + ER E+I ++ + +M F +
Sbjct: 781 VAKLAGMPPRVLSRANEILKKLE----AERTGGESIKESIKKVQKQAVQMQMFSI 831
>gi|163753136|ref|ZP_02160260.1| DNA mismatch repair protein [Kordia algicida OT-1]
gi|161326868|gb|EDP98193.1| DNA mismatch repair protein [Kordia algicida OT-1]
Length = 869
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 282/558 (50%), Gaps = 64/558 (11%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
++ +++K ++PMG RLL+ W P+ + + + R ++F L EE + + + +++
Sbjct: 286 AITLLDVIDKTISPMGGRLLKRWLALPLKNSQQIKQRHEVVNFLLHQEEELGKIQQHIRH 345
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
+ DI ++ K + + + S+ +++ + +I S+S E L+++ I
Sbjct: 346 ISDIERLISKVATGKI--SPREVIQLKNSLEAIVPIKQI----TSKSTNEALKVIGDTIH 399
Query: 323 EKAASCITTEL--AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
E C EL + + E + VN K G + G+ D+LDELR I ++L
Sbjct: 400 E----C---ELLRSKIKETLNEEAPVNILK----GNAIASGYSDKLDELRGIAFSGKDYL 448
Query: 381 EEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCI---FEEKLDDT-TLEQLQGFEFA 434
+++ E C+ +P I + GY + + + K+ +T T +Q
Sbjct: 449 DKMLERE-------CEATGIPSLKIASNNVFGYYIEVRNTHKAKVPETWTRKQ------- 494
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
+ ++ E Y T + +E + + KI+ +E+ + DLV I + + + N
Sbjct: 495 -TLVNAER----YITEELKEYETKILGAEEKIMQIEQELFADLVVWINQYIKAVQQNANI 549
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-N 550
+LDC A +A NNY P + L+I+NGRH + E + +++I ND +D N
Sbjct: 550 IGKLDCLCGFATLAKANNYSYPKIDDSFDLEIKNGRHPVIEKQLPIGESYIANDVYLDRN 609
Query: 551 DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPAD+A +GL D S +++
Sbjct: 610 TQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPADSARIGLVDKIFTRVGASDNISM 669
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++++ +L + +SL LLDE G+GT T DGI + Y K L
Sbjct: 670 GESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPSRAKTL 729
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH E LNE +R+K Y +SV ++N ++FL +LV G + S+G+H A
Sbjct: 730 FATHYHE-LNE-MTEIFDRIKNYNVSVKELKDN------VLFLRKLVKGGSEHSFGIHVA 781
Query: 723 LLAGVPAEVIKRAAYVLE 740
+AG+P +VI +A +L+
Sbjct: 782 KMAGMPQQVIHKANKILK 799
>gi|291288723|ref|YP_003505539.1| DNA mismatch repair protein MutS [Denitrovibrio acetiphilus DSM
12809]
gi|290885883|gb|ADD69583.1| DNA mismatch repair protein MutS [Denitrovibrio acetiphilus DSM
12809]
Length = 854
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 170/630 (26%), Positives = 290/630 (46%), Gaps = 92/630 (14%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD+ A L++ + + S E +++ ++N T MG R L+ W L P+ +
Sbjct: 253 LDSVAISTLELVKNSRDGS--------EKDTLYSVLNHTNTTMGARTLKKWLLSPLRNTN 304
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF-----NSPSFIYTASDWTAF- 288
+ R I FF+ ++ +L + L+ V DI I + N+ ++ + F
Sbjct: 305 TILRRQEIIEFFINNQTTADALRDQLERVYDIERITTRLSANRCNARDLVWLKNSTETFP 364
Query: 289 ----LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+ S C H+ L E+ LN DI + E A E + I
Sbjct: 365 TIKYMLSSCENPHI---------ADLTEEFDDLN-DI------TVLIESAIEDEPPVTIT 408
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLCKEMFVPCI 403
+ G L+++GF E+DEL+ I E + L ++ S + + K F
Sbjct: 409 E---------GGLIKKGFNPEVDELKDIKENSRQILLKIESEQRAKTGISSLKVKFNKVF 459
Query: 404 VYIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
Y +I YL + EE TL + F P+ +EL+ +
Sbjct: 460 GYYIEISKAYLNRVPEEYTRKQTLVNAERFII----------------PELKELEEKILH 503
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
+++++E I ++ + + L + +ELDC LSLA A QN+Y +P++
Sbjct: 504 ADSRLVNLEYEIFSEIRRQVSESAARLRSSAATISELDCLLSLAKTAVQNDYRKPLVGDF 563
Query: 522 PLLDIQNGRHVLQEMTVDT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLS 579
+ I GRH + E +++ ++PND +D N ++ IITGPN +GKS Y++ ALI ++
Sbjct: 564 DDIKITEGRHPVVEKNINSAYVPNDIEMDINRNKLTIITGPNMAGKSTYLRMCALITLMA 623
Query: 580 HIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
HIGS+VPA A +G+ D S ++ +S+FM+++ + +L AT +SL +LDE
Sbjct: 624 HIGSYVPASEAEIGIVDRIFTRVGASDNLAGGESTFMVEMVEAANILNNATDKSLIILDE 683
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLR 691
G+GT T DG+ + ++ ++ + K L TH EL + + T V
Sbjct: 684 LGRGTSTFDGVS-IAWSVAEYIADHINAKTLFATHYHELTD---------ISLTTQGV-- 731
Query: 692 PENNSTDV----EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
N +T+V +++F+ ++ PG A SYG+H A LAG+P EVI RA +L + N+
Sbjct: 732 -RNCATEVVEHEGELIFMRKVRPGTADKSYGIHVAELAGLPKEVITRANDILRNLEKNEL 790
Query: 748 VERW---SHENISAQDQQYKNAVEKMLAFD 774
+ + + Q + V+ ML FD
Sbjct: 791 SPQGIANTPKKEKKQKSHERGVVQTMLVFD 820
>gi|269122808|ref|YP_003305385.1| DNA mismatch repair protein MutS [Streptobacillus moniliformis DSM
12112]
gi|268314134|gb|ACZ00508.1| DNA mismatch repair protein MutS [Streptobacillus moniliformis DSM
12112]
Length = 848
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 196/755 (25%), Positives = 354/755 (46%), Gaps = 112/755 (14%)
Query: 4 YMACILHGHR-VGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE 62
Y+ACI + ++ +SY D + + VLE ED+ LI + Y+ +P+ I + +E
Sbjct: 124 YLACIYYSNQNYAMSYLDITTGEFKVLECDEDN-----LISEI-YKIEPKEILLTQSLKE 177
Query: 63 SFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMM 122
F S + + D + SI + +V + L I L+S
Sbjct: 178 KFGSIIDKLD----------INISIVT-----------KVNDAEKFLKDYFNIVSLDSYG 216
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEA 182
G + + A +L + + N +TI + ++ +KF+++ ++
Sbjct: 217 IFGKKAMIDACACILDYVLAMQF----------NNELTIRKIEVINKSKFVEISSSTLRN 266
Query: 183 LQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNA 242
L+I + + + G S+ +++KC + G R L+ P+L+L+ +N R +
Sbjct: 267 LEIVKNQRDKTTYG--------SLLWVLDKCKSSTGSRKLKQLLQSPLLELDEINKRYDD 318
Query: 243 ISFFLCSEELM-ASLHETLKYVKDIPHILKK--FNSPSFIYTASDWTAFLKSICSLLHVN 299
I + LC E + + L V DI +L K F++ + D A +I S +
Sbjct: 319 IEY-LCKEIIKREEIRNLLDNVYDIERLLGKVIFSNEN----GKDINALKNTIYSSFKIR 373
Query: 300 KIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVR 359
++ E+ + ++F+I+++ + I I + D S +G +++
Sbjct: 374 DLWP--------EKFKNIDFNILQEIHTKIDN---------ILLEDAPFSVREG--NMIK 414
Query: 360 EGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEK 419
G ELDELR I L E+ S E + K + I Y + GY + + +
Sbjct: 415 SGVNSELDELRNIMNNGTGILLEIESREREKTG--IKNL---KIKYNNIFGYFIEVSKSN 469
Query: 420 LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVS 479
++ ++ + ++ Y T + + ++ + + KI ++E I ++L S
Sbjct: 470 MNMVPETYIRKQTLSNAER--------YITEEIKSYEDKIINSKAKITELEYIIFKNLSS 521
Query: 480 HICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV- 538
+I F + ++ N A +D +S A+ A +NNY+RP E +I++ RH + E +
Sbjct: 522 YIKEFKNVFIELSNTLAYIDILISFAITALENNYVRPNFN-EEYFEIKDARHPVVEKLIG 580
Query: 539 -DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD- 596
+TFI N+ D+ R I+TGPN SGKS Y+KQ+ALI ++ IGSFVPA +A + + D
Sbjct: 581 DNTFISNNVYFDDKNRFIILTGPNMSGKSTYMKQIALISIMAQIGSFVPASSANLNMVDK 640
Query: 597 -------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
S + + QS+FM+++ +V ++ AT+ SL +LDE G+GT T DG+ + +I
Sbjct: 641 ILTRIGASDDILSGQSTFMVEMSEVASIINSATTNSLIILDEVGRGTSTYDGLA-IASSI 699
Query: 650 NYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
+ ++ ++ K + TH LTEL NE E +K Y + V E N + FL
Sbjct: 700 SKYIVENINAKSIFATHYHELTELENE-----YETIKNYRIEV--EEKNGK----VNFLR 748
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
+V G A SYG+ A LAG+P +I+ + +L++
Sbjct: 749 TIVKGGADRSYGIEVAKLAGLPKTIIRESTKLLKS 783
>gi|322371551|ref|ZP_08046097.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
gi|320548842|gb|EFW90510.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
Length = 888
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 167/632 (26%), Positives = 309/632 (48%), Gaps = 67/632 (10%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITID---SVIEVSLNKFLKLDATAH 180
+ ++ ++RA G LL+ E R + + + ++ + +D + ++ LDA A
Sbjct: 243 LATDAEIRACGALLSYAEYVRGGEGVTEDDTDDTDTRLDYLNHLTRYDPRSYMLLDAVAL 302
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
+L++F + H ++ ++ G++++ +G R L +W RP+L+ + + +RL
Sbjct: 303 TSLELFSS--RAVH-----GQDDATLVGVLDETACALGSRKLTDWLRRPLLERDRIEARL 355
Query: 241 NAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNK 300
+A+ + + + +HE L+ V DI ++ + + A D L+S+ + L V
Sbjct: 356 DAVEEWTTTVQAREEVHELLRNVYDIERLISRVSRGRA--NARD----LRSLKATLDVVP 409
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+ +LR L+ ++ E+A V + + I E G +++
Sbjct: 410 DIAEAMEGVESPKLRRLHENL---------DEMADVRDRIGRAIPEEPPIEITEGGVIKS 460
Query: 361 GFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
G+ DELD+LR+ +++ E + E + L + Y GY + + +
Sbjct: 461 GYDDELDDLRETERSGKAWIDDLEASERERTGIGSLK-------VGYNQVHGYYIEVTDP 513
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
LD + + S+ ++TP+ +E ++ + + ++E + ++
Sbjct: 514 NLDKVPEDYTRRQTLKNSER--------FYTPELKEREDEIVRAEQRADELEYDLFCEVR 565
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
+ S+ + AELD ++LA VA ++ Y RP + E + +I+NGRH + E T
Sbjct: 566 EAVAEESERVQSLAETLAELDTLVALAEVAAKHGYSRPEIVPEGI-EIRNGRHPVVERTQ 624
Query: 539 DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-- 596
+F+PNDTR+D+D + +ITGPN +GKS Y++QVALI L+ +GSFVPAD A + L D
Sbjct: 625 SSFVPNDTRLDHD-TLAVITGPNMAGKSTYMRQVALITILAQVGSFVPADEARLELVDRV 683
Query: 597 ------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
S + +S+FM+++ ++ +L AT +SL LLDE G+GT T DG + ++
Sbjct: 684 FTRVGASDDIAGGRSTFMVEMTELADILGNATDRSLILLDEVGRGTSTTDGFA-IARSVT 742
Query: 651 YFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
V ++ K L TH LT + ++ LP + L F E + ++VF +
Sbjct: 743 EHVHDEIGAKTLFATHHHDLTAVADD--LPNAINLHFGAT-----ERDG----EVVFDHH 791
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ G + SYG+ A LAGVP VI+R+ +L
Sbjct: 792 ISEGATMASYGVEVAQLAGVPESVIRRSKDLL 823
>gi|312143591|ref|YP_003995037.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
gi|311904242|gb|ADQ14683.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
Length = 868
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 177/672 (26%), Positives = 312/672 (46%), Gaps = 91/672 (13%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
+NS+ G E V A+G +LA L+ + T++Q I ++ L ++
Sbjct: 218 INSLEGFGCEDMETAVYAAGQILAYLKQTQ-KRTVKQ---------ITTLHPYYLEDYMV 267
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDA L++ +T I K S+ ++++ +T MG R ++ W +P+++ +
Sbjct: 268 LDAATRRNLELTKT--------IRDNKTSGSLLSIVDQTITSMGGRTIKKWINQPLINQK 319
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ R ++I L + ++ + + + D+ I+ K S D A S+
Sbjct: 320 EIVKRHDSIEELLDNFRILNKCRDLMADIYDLERIMSKITYQS--ANGRDLIALRNSLAK 377
Query: 295 LLHVNKIFEVGISE----------SLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
L + K+ +E SL + +L++ I+++ + IT
Sbjct: 378 LPGLEKLIADFKTELFSEIQDGFDSLEDIFKLIDDSIIDEPPTTITE------------- 424
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
G ++++ + +LDELR + + +++ +Q K V
Sbjct: 425 ----------GGIIKDNYNKKLDELRSLANQGKDWIS------ALQKEEREKTGINTLKV 468
Query: 405 YIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
+++ GY + + LD + +E + + E Y PK +E + +
Sbjct: 469 GFNKVFGYYLEVTNSHLDKVP----ERYERKQTLSNSER----YIIPKLKEKEAEVLGAE 520
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
KI D+E + ++ I D + K + AE+D +S A +A +NNY RP +
Sbjct: 521 EKINDLEYKLFVEIRDEIAQEVDRINKTASLIAEIDVLMSFAFLAIENNYNRPEINSGEE 580
Query: 524 LDIQNGRH-VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
+ I+NGRH V+++M + F+ ND +D R IITGPN SGKS Y++Q+ALIV L+ +
Sbjct: 581 IIIKNGRHPVVEKMFSEQFVANDCYLDQTKQRFIIITGPNMSGKSTYMRQIALIVLLAQV 640
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPAD AT+GLTD S +T QS+FM+++++V ++ +T +SL +LDE G
Sbjct: 641 GSFVPADEATIGLTDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNNSTDRSLIILDEVG 700
Query: 634 KGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
+GT T DG+ + Y + + + L TH EL + + +K Y + V
Sbjct: 701 RGTSTYDGVSIAWAVSEYLNNPERIGARTLFATHYHELTR--LEDEYDGIKNYNVLV--- 755
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWS 752
D + + FL+R+ G A SYG+ A LAG+P E+I A +L + N +
Sbjct: 756 ---KEDSDGVHFLHRIGEGRADDSYGIEVARLAGLPEEIIISAQKILSRLEENNKMPLRK 812
Query: 753 HENISAQDQQYK 764
E S QD +++
Sbjct: 813 REK-SLQDSKHQ 823
>gi|418628482|ref|ZP_13191027.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU127]
gi|374837328|gb|EHS00894.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU127]
Length = 873
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 170/612 (27%), Positives = 295/612 (48%), Gaps = 60/612 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLK-FYTM 687
DE G+GT T DG+ L I Y V K L TH EL P + LK +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHEL-----TPLDQMLKCLKNV 732
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 733 HVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKP 787
Query: 748 VERWSHENISAQ 759
+ SHEN Q
Sbjct: 788 SYQLSHENTDDQ 799
>gi|262383129|ref|ZP_06076266.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_33B]
gi|262296007|gb|EEY83938.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_33B]
Length = 870
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 278/582 (47%), Gaps = 73/582 (12%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
+ D+ I+ K SP + A +K C + +G EQL
Sbjct: 343 QIGDLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASEEPSLCRIG------EQL 396
Query: 315 RL--LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ L D +EK + L VN+ G ++ +G +ELD+LR I
Sbjct: 397 NVCALIRDRIEKEINNDPPSL------------VNK------GGIIAKGVNEELDDLRAI 438
Query: 373 YEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
++L +V +EL +P L I + + GY + + D ++
Sbjct: 439 AYSGKDYLLKVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRK 491
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
++ Y T + +E + + KIL +E + +LV + + +
Sbjct: 492 QTLVNAER--------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQM 543
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTR 547
N +DC LS A A N Y+RP+++ +DI+ GRH + E + + +I ND
Sbjct: 544 NANLIGRIDCLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVY 603
Query: 548 IDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S
Sbjct: 604 LDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASD 663
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDV 657
+++ +S+FM+++++ +L TS+SL L DE G+GT T DGI + + Y +
Sbjct: 664 NISVGESTFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNA 723
Query: 658 PPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
K L TH E LNE + ++ +R+K Y +SV N ++FL +L+PG + S
Sbjct: 724 KAKTLFATHYHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHS 774
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
+G+H A +AG+P ++KR+ +L+ ++ E + + + A
Sbjct: 775 FGIHVAKMAGMPKSIVKRSNEILKQLESENRQEGITGKPVKA 816
>gi|260665334|ref|ZP_05866182.1| DNA mismatch repair protein MutS [Lactobacillus jensenii SJ-7A-US]
gi|260560838|gb|EEX26814.1| DNA mismatch repair protein MutS [Lactobacillus jensenii SJ-7A-US]
Length = 854
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 171/599 (28%), Positives = 291/599 (48%), Gaps = 65/599 (10%)
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
A + I EVS ++L++ L++ + K MG S+F +++K T
Sbjct: 232 AHLQIAKSYEVS--QYLQMSHVVQNNLELVASAKTGKKMG--------SLFWLLDKTNTA 281
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK--FN 274
MG RLL+ W RP+L + + R + L + + ++ + LK V D+ + + F
Sbjct: 282 MGGRLLKQWLARPLLSISEIEKRQKIVQAMLDNYFIREAVKDALKGVYDLERLTGRIAFG 341
Query: 275 SPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
S + A + +S+ ++ + + +FE G + L NF A I +L
Sbjct: 342 SAN----ARELLQLSRSLDAIPQIQSALFESGDED-------LANF-----ADQII--DL 383
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ + + + I N G L+REG ++LD R +L ++ + E
Sbjct: 384 SELAKKIKDTIVENPPILTTDGGLIREGINEQLDRYRDAMNNGKTWLAQLQAQE-----R 438
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y GY + + + + +G + G + Y TP+ +
Sbjct: 439 TATGIENLKIGYNKVFGYFIQVSKGNIAKVP----EGRYIRKQTLTGSER---YITPELK 491
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E +NL+ + +K D+E I DL +I F L + N A LD S A VA +NNY
Sbjct: 492 EHENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNTIASLDALTSFATVAEENNY 551
Query: 514 MRPILTLEPL-LDIQNGRH-VLQEMTVD-TFIPNDTRIDNDGRINIITGPNYSGKSIYIK 570
RP + + + GRH V++++ D ++IPND ++ +D + +ITGPN SGKS Y++
Sbjct: 552 CRPSFHQDSQEIKVIAGRHPVVEKVLADGSYIPNDIQMADDTSVFLITGPNMSGKSTYMR 611
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALI ++ +GSFVPA A++ + D + + + QS+FM+++ + L+ AT
Sbjct: 612 QMALIAVMAQVGSFVPATEASLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQNAT 671
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSER 681
+SL L DE G+GT T DG+ L G + Y + V K L TH EL + E L +
Sbjct: 672 KRSLVLFDEIGRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTDMEKTL---DH 727
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
LK + + EN ++FL++++PG A SYG+H A LAG+P +V++ A+ +L+
Sbjct: 728 LKNIHVGATQ-ENGK-----LIFLHKILPGPADQSYGIHVAQLAGLPNKVLREASKMLK 780
>gi|238855606|ref|ZP_04645907.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 269-3]
gi|313473091|ref|ZP_07813575.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 1153]
gi|238831750|gb|EEQ24086.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 269-3]
gi|313448795|gb|EEQ67673.2| DNA mismatch repair protein MutS [Lactobacillus jensenii 1153]
Length = 860
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 171/599 (28%), Positives = 291/599 (48%), Gaps = 65/599 (10%)
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
A + I EVS ++L++ L++ + K MG S+F +++K T
Sbjct: 238 AHLQIAKSYEVS--QYLQMSHVVQNNLELVASAKTGKKMG--------SLFWLLDKTNTA 287
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK--FN 274
MG RLL+ W RP+L + + R + L + + ++ + LK V D+ + + F
Sbjct: 288 MGGRLLKQWLARPLLSISEIEKRQKIVQAMLDNYFIREAVKDALKGVYDLERLTGRIAFG 347
Query: 275 SPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
S + A + +S+ ++ + + +FE G + L NF A I +L
Sbjct: 348 SAN----ARELLQLSRSLDAIPQIQSALFESGDED-------LANF-----ADQII--DL 389
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ + + + I N G L+REG ++LD R +L ++ + E
Sbjct: 390 SELAKKIKDTIVENPPILTTDGGLIREGINEQLDRYRDAMNNGKTWLAQLQAQE-----R 444
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y GY + + + + +G + G + Y TP+ +
Sbjct: 445 TATGIENLKIGYNKVFGYFIQVSKGNIAKVP----EGRYIRKQTLTGSER---YITPELK 497
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E +NL+ + +K D+E I DL +I F L + N A LD S A VA +NNY
Sbjct: 498 EHENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNTIASLDALTSFATVAEENNY 557
Query: 514 MRPILTLEPL-LDIQNGRH-VLQEMTVD-TFIPNDTRIDNDGRINIITGPNYSGKSIYIK 570
RP + + + GRH V++++ D ++IPND ++ +D + +ITGPN SGKS Y++
Sbjct: 558 CRPSFHQDSQEIKVIAGRHPVVEKVLADGSYIPNDIQMADDTSVFLITGPNMSGKSTYMR 617
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALI ++ +GSFVPA A++ + D + + + QS+FM+++ + L+ AT
Sbjct: 618 QMALIAVMAQVGSFVPATEASLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQNAT 677
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSER 681
+SL L DE G+GT T DG+ L G + Y + V K L TH EL + E L +
Sbjct: 678 KRSLVLFDEIGRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTDMEKTL---DH 733
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
LK + + EN ++FL++++PG A SYG+H A LAG+P +V++ A+ +L+
Sbjct: 734 LKNIHVGATQ-ENGK-----LIFLHKILPGPADQSYGIHVAQLAGLPNKVLREASKMLK 786
>gi|58336745|ref|YP_193330.1| DNA mismatch repair protein MutS [Lactobacillus acidophilus NCFM]
gi|75507645|sp|Q5FLX5.1|MUTS_LACAC RecName: Full=DNA mismatch repair protein MutS
gi|58254062|gb|AAV42299.1| DNA mismatch repair [Lactobacillus acidophilus NCFM]
Length = 856
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 169/586 (28%), Positives = 278/586 (47%), Gaps = 61/586 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 242 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 293
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + + + LK V D+ + + AF
Sbjct: 294 PLLNVDEINHREEMVQALFDGYFTRENAIDALKGVYDLERLTGRI-------------AF 340
Query: 289 LK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+ LL +++ E ++ + L + D++++ A I L V EL+ I +
Sbjct: 341 GNVNARELLQLSRSLEA--VPTILDALDQSDSDVLKEFAQKIDP-LKGVAELITTTIVKD 397
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+REG +LD R ++L A +E + E + Y
Sbjct: 398 PPLLTTEGGLIREGVDKQLDRYRDAMNNGKKWL---AQMEADERQKTGIENL--KVGYNK 452
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + L++ ++ T Y TP+ +E +NL+ + +
Sbjct: 453 VFGYYIQVSNGNKNKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRST 505
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLDI 526
D+E + L + + L K + A LD F A VA QNNY RP T +D+
Sbjct: 506 DLEYDLFVRLREEVKKYIPALQKLGSQLAALDVFCGFASVAEQNNYCRPSFHTDNQDIDV 565
Query: 527 QNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
NGRH + E MT ++IPN +D+ I +ITGPN SGKS Y++Q+ALI ++ +GSF
Sbjct: 566 VNGRHPVVEKVMTAGSYIPNSVEMDSSTNIYLITGPNMSGKSTYMRQMALIAIMAQVGSF 625
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 626 VPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGT 685
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPEN 694
T DG+ L G + Y + V K TH EL L+E + LK + V E
Sbjct: 686 ATYDGMALAGAIVKY-LHDKVGAKAFFATHYHELTDLDETL----DHLK--NIHVGATEE 738
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 739 NGK----LIFLHKILPGPADQSYGIHVAQLAGLPKSVLREATKLLK 780
>gi|374308280|ref|YP_005054711.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
gi|291166608|gb|EFE28654.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
Length = 870
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 168/622 (27%), Positives = 293/622 (47%), Gaps = 57/622 (9%)
Query: 144 RIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG 203
RI+ + Q + ++S+ + +K+L LD ++ L++ ++ + +
Sbjct: 242 RILLSYIQYTQKTVANNLNSIHWIYQDKYLHLDYSSISNLELMES--------FLQKNKK 293
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
+S+FG+++K T MG R+LR W P+ D + + RL+ + + L L E L V
Sbjct: 294 YSLFGVLDKTKTSMGARMLRKWIEHPLRDKKEIEQRLDIVEECISDYSLREDLREYLDSV 353
Query: 264 KDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
D+ I K + + T D +S+ L +LRE++ L + ++
Sbjct: 354 YDMERICAKISYDTV--TVRDLLNLKESLYDL------------PNLREKIELSDKKLLI 399
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
+ + T L +Y L+ I G ++REG+ ELDE+R I + L ++
Sbjct: 400 QIFEQMDT-LEDIYHLLDDSISDRPIGTIKDGEVIREGYSKELDEMRSIEKNAASILSQM 458
Query: 384 ASLELVQLPHLCKEMFVPC-IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET 442
+L F I Y GY + I L L + +
Sbjct: 459 ------ELQERASTGFKTLKIGYNKVFGYYIEITHAALKSGELPE----SYVRKQTLANC 508
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
+R Y + +EL+ + + LD++ + ++ + + + + LD L
Sbjct: 509 ER--YINQELKELEIKILTSRQRALDLQNELYAEVKTQVKHAVFRIQTTADKIGSLDALL 566
Query: 503 SLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGP 560
SLA ++QN+Y++P + E L+I +GRH + E V+ F+PNDT + D IITGP
Sbjct: 567 SLAETSYQNDYVKPSINKEKRLEIADGRHPVVERLVEEQIFVPNDTNLLKDKNFMIITGP 626
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH--------MTAEQSSFMIDLH 612
N GKS Y++QVALI ++HIG ++PA + + L D+ + ++ QS+FM++++
Sbjct: 627 NMGGKSTYMRQVALICIMAHIGCYIPAKSGDIPLLDAIYTRVGAADDLSQGQSTFMVEMN 686
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN 672
+V +L AT SL +LDE G+GT T DG+ + I F+ + L TH E+ +
Sbjct: 687 EVSHILEHATEHSLVILDEVGRGTSTYDGMS-IAWAIVAFICRKIQCMTLFSTHYHEITD 745
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
+ + + Y ++V + E+++FL +LV G A SYG+H A LA +P EV+
Sbjct: 746 --IAERFDNVVNYCVAVEEKK------EEVLFLRKLVQGKADKSYGIHVAKLAHLPKEVL 797
Query: 733 KRAAYVLEAAQNNKHVERWSHE 754
A + L Q+ K + WS E
Sbjct: 798 SLAEHKLNQLQSQK--QEWSRE 817
>gi|256852232|ref|ZP_05557618.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260661736|ref|ZP_05862647.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
gi|256615278|gb|EEU20469.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260547483|gb|EEX23462.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
Length = 854
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 169/597 (28%), Positives = 285/597 (47%), Gaps = 61/597 (10%)
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
A + I EVS ++L++ L++ + K MG S+F +++K T
Sbjct: 232 AHLQIAKSYEVS--QYLQMSHVVQNNLELVASAKTGKKMG--------SLFWLLDKTNTA 281
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
MG RLL+ W RP+L + + R + L + + + LK V D+ + +
Sbjct: 282 MGGRLLKQWLARPLLSISEIEKRQKIVQAMLDNYFTREGVKDALKGVYDLERLTGRIAFG 341
Query: 277 SFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY 335
S A + +S+ ++ + + +FE G + L NF A I +L+
Sbjct: 342 S--ANARELLQLSRSLDAIPQIQSALFESGDED-------LANF-----AEQII--DLSE 385
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
+ + + I N G L+REG ++LD R +L ++ + E
Sbjct: 386 LAKKIKDTIVENPPILTTDGGLIREGINEQLDRYRDAMNNGKTWLAQLQAQE-----RKA 440
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+ I Y GY + + + + +G + G + Y TP+ +E
Sbjct: 441 TGIENLKIGYNKVFGYFIQVSKGNVAKVP----EGRYIRKQTLTGSER---YITPELKEH 493
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
+NL+ + +K D+E I DL +I F L + N A LD S A VA +NNY R
Sbjct: 494 ENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNAIASLDALTSFATVAEENNYCR 553
Query: 516 PILTLEPL-LDIQNGRH-VLQEMTVD-TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQV 572
P + + + GRH V++++ D ++IPND ++ +D + +ITGPN SGKS Y++Q+
Sbjct: 554 PSFHQDSQEIKVVAGRHPVVEKVLADGSYIPNDIQMADDTSVFLITGPNMSGKSTYMRQM 613
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALI ++ +GSFVPA A + + D + + + QS+FM+++ + L+ AT +
Sbjct: 614 ALIAVMAQVGSFVPATEAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQNATKR 673
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLK 683
SL L DE G+GT T DG+ L G + Y + V K L TH EL + E L + LK
Sbjct: 674 SLVLFDEIGRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTDMEKTL---DHLK 729
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ + N ++FL++++PG A SYG+H A LAG+P +V++ A+ +L+
Sbjct: 730 NIHVGATQENGN------LIFLHKILPGPADQSYGIHVAQLAGLPNKVLREASKMLK 780
>gi|85818143|gb|EAQ39303.1| DNA mismatch repair protein MutS [Dokdonia donghaensis MED134]
Length = 863
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 270/558 (48%), Gaps = 64/558 (11%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
+ ++ +++K + MG RLL+ W P+ ++ + R +SF + + + +K
Sbjct: 274 KAITLIDIIDKTTSAMGGRLLKRWLALPLKRVDEIKRRHEVVSFLSDNGNIFDKMQGHIK 333
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLN 318
+ D+ ++ K + + + S+ +++ + + +ESL+ EQL+ N
Sbjct: 334 QIGDLERLISKVATAKI--SPREVIQLKNSLEAIVPIKTLASGTDNESLKIIGEQLQ--N 389
Query: 319 FDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
+++ E E + I+ G + GF ELD+LR + + +
Sbjct: 390 CEVLRSKIKETLRE-----EAPVSIVK---------GGAIAPGFHKELDDLRALSQGGKD 435
Query: 379 FLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
+LE++ E + L +F GY + + D E ++
Sbjct: 436 YLEKMLERETERTGITSLKIASNNVF----------GYYIEVRNTHKDKVPEEWIRKQTL 485
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
++ Y T + +E + + +I +E+ + +LVS + F +
Sbjct: 486 VNAER--------YITDELKEYEGKILGAEERIQGIEQQLFAELVSWVGGFIPQVQANAT 537
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN 550
A+LDC L +A +NNY+RP L ++DI+ GRH + E + + ++ ND +D+
Sbjct: 538 QIAQLDCLLGFTQLARENNYVRPTLDESQVIDIKEGRHPVIEKQLPLGEAYVTNDVYLDS 597
Query: 551 -DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D ++ +ITGPN SGKS ++Q ALIV L+ +GSFVPA AA +GL D S +++
Sbjct: 598 ADQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAAHIGLVDKIFTRVGASDNIS 657
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+S+FM+++++ +L + +SL LLDE G+GT T DGI + Y PK
Sbjct: 658 MGESTFMVEMNETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWAISEYLHEHRGRPKT 717
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH E LNE C ER+K Y +SV ++N ++FL +LVPG + S+G+H
Sbjct: 718 LFATHYHE-LNEMC-ETFERIKNYNVSVKELKDN------VLFLRKLVPGGSAHSFGIHV 769
Query: 722 ALLAGVPAEVIKRAAYVL 739
A +AG+P +V++RA ++
Sbjct: 770 AKMAGMPQQVLRRATKMM 787
>gi|421276331|ref|ZP_15727154.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
gi|395878284|gb|EJG89351.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
Length = 844
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 176/631 (27%), Positives = 289/631 (45%), Gaps = 82/631 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDFATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++DL+ + R + FL + L E+LK V DI + + SF +
Sbjct: 293 SWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTESLKGVYDIERLASRV---SFGKSNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + + I+ +A
Sbjct: 350 KDLLQLATTLGSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELENLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
VI G ++R GF + LD+ R++ E ++ E+ E +
Sbjct: 404 HVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEVKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 NTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
G++ K ++E I + + + L A +D LA+VA + + +R
Sbjct: 497 EGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIAAVDVLQGLAVVAEKQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P E +DIQNGRH + E M T+IPN ++D D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGQESRIDIQNGRHAVVEKVMGAQTYIPNSIQMDEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 ITAVMAQMGSYVPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLEASLEHLVNVHV 735
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
T+ E N + FL+++ PG A SYG+H A +AG+PA+++KRA +L
Sbjct: 736 ATL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPADLLKRADAIL----- 781
Query: 745 NKHVERWSHENISAQDQQYKNAV-EKMLAFD 774
+E S EN + +Q +N V E+M FD
Sbjct: 782 -TQLESQSQENPISINQ--RNIVNEQMSLFD 809
>gi|298373253|ref|ZP_06983242.1| DNA mismatch repair protein MutS [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274305|gb|EFI15857.1| DNA mismatch repair protein MutS [Bacteroidetes oral taxon 274 str.
F0058]
Length = 896
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 157/568 (27%), Positives = 276/568 (48%), Gaps = 72/568 (12%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++F ++++ TPMG RL+R W P+ +++ + RL+ ++ F + E + + E+L +
Sbjct: 310 TLFAVLDRNKTPMGSRLMRRWLTFPLKEVKPITDRLSVVTHFYRNPEQRSIIEESLDKIG 369
Query: 265 DIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
D+ IL K +P ++ TA +K+ C+ N I S EQL
Sbjct: 370 DLERILSKVAVGRINPREMWQLMTALKAIKPIKATCTETTDNLIMA-----SFGEQLNEC 424
Query: 318 NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
N ++EK I + G ++ G ELDELR+I
Sbjct: 425 N-TLIEKIKREIVEDPPATL---------------AKGGVIASGVDAELDELRKISSSGK 468
Query: 378 EFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+L+++ E +P + I Y GY + + D ++
Sbjct: 469 SYLQQILERESAATGIPSMK-------INYNQVFGYYIEVTNAHKDKVPQTWIRRQTLTS 521
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E + + KIL +E+ I L+S + F + N
Sbjct: 522 AER--------YITEELKEYETKILGAEEKILSLEQRIFNALISSVSQFIATIQLDCNIL 573
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG 552
A++DC LS ++ +N Y PI+ +DI+ GRH + E + ++++PND +D++
Sbjct: 574 AQIDCLLSFTRISQENRYNCPIVNDSTTIDIRQGRHPVIEKNLPIGESYVPNDILLDDEN 633
Query: 553 R-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+ I IITGPN +GKS ++Q ALIV ++ IG +VPA++A++G+ D S ++ +
Sbjct: 634 QQIIIITGPNMAGKSALLRQTALIVLMAQIGCYVPAESASIGIVDKIFTRVGASDNIASG 693
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP---PK 660
+S+FM+++++ +L + +SL L DE G+GT T DGI + + Y ++P K
Sbjct: 694 ESTFMVEMNEAASILNNISDRSLILFDELGRGTSTYDGISIAWAIVEYI--HEMPKCRAK 751
Query: 661 VLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGL 719
L TH E LNE + +S R+K Y +SV + ++F+ +LV G + S+G+
Sbjct: 752 TLFATHYHE-LNE--MERSYRRIKNYNVSVREVDGK------VLFIRKLVRGGSEHSFGI 802
Query: 720 HCALLAGVPAEVIKRAAYVLEAAQNNKH 747
H A +AG+P VIKRA +L +N++
Sbjct: 803 HVAKIAGMPPSVIKRADEILLQLENSQR 830
>gi|313125313|ref|YP_004035577.1| DNA mismatch repair protein muts [Halogeometricum borinquense DSM
11551]
gi|448287091|ref|ZP_21478307.1| DNA mismatch repair protein MutS [Halogeometricum borinquense DSM
11551]
gi|312291678|gb|ADQ66138.1| DNA mismatch repair protein MutS [Halogeometricum borinquense DSM
11551]
gi|445572837|gb|ELY27367.1| DNA mismatch repair protein MutS [Halogeometricum borinquense DSM
11551]
Length = 941
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 183/639 (28%), Positives = 306/639 (47%), Gaps = 69/639 (10%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQ 184
+E ++RA GGLL D E + + + + V + L+LDATA +L+
Sbjct: 249 NESEMRAVGGLL---------DYAEYTQGDDGPLEYVSRVRRYDPERSLQLDATAIRSLE 299
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+F++ + PS G ++ G++++ +GRR L W RP +D + R +A+
Sbjct: 300 LFES-RSPSG--------GRTLVGVLDETACALGRRRLTAWLRRPSVDEREIRRRHDAVG 350
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ ++ + L V D+ ++ + + A D A ++ ++ V
Sbjct: 351 ELIDRPLARETVRDHLSEVYDLERLVSRVSRERA--NARDLRALKTTLDAVPEVKS---- 404
Query: 305 GISESLREQLRLLNFDIVEKAASCIT-TELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
+SE + L+ L C + ELA V +L+ I + +E G ++REGF
Sbjct: 405 ALSEMETDPLQRL----------CDSLDELADVRDLIGEAIRPDPPQEITEGGVIREGFD 454
Query: 364 DELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDT 423
DELDE+R E E+ V++LE + + +H GY + + LD
Sbjct: 455 DELDEIRATEREGREW---VSNLEEQEQERTGIDSLEVGYNQVH--GYYIEVTNPNLDSV 509
Query: 424 TLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICL 483
+ + S+ ++TP+ + ++ + K +E + ++ + +
Sbjct: 510 PDDYTRRQTLKNSER--------FYTPELKRREDEILSASEKADALEYEVFTNVRADVAE 561
Query: 484 FSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIP 543
+ L + A LD + A VA N+Y+RP + + ++I+ GRH + E T F+P
Sbjct: 562 EVERLQSLADSLATLDVLATFAAVAAANDYVRPEMGTD-TVEIEAGRHPVVERTQGEFVP 620
Query: 544 NDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD------- 596
N +DG + +ITGPN SGKS Y++QVALI L+ GSFVPA AA + + D
Sbjct: 621 NPADF-SDGHVAVITGPNMSGKSTYMRQVALIAILAQAGSFVPARAARLPILDRIFTRVG 679
Query: 597 -SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
S + QS+FM ++ ++ +L AT SL LLDE G+GT T DG+ + T FV
Sbjct: 680 ASDDIAGGQSTFMREMAELTDILHNATEDSLVLLDEVGRGTSTTDGLAIARATTE-FVHD 738
Query: 656 DVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHA 713
+V L TH +L L+E LP++ L F +V + E S + D+ FL+R+ G +
Sbjct: 739 EVGATTLFATHYHDLTALSE-RLPEAFNLHF---TVEKTERESGE-PDVTFLHRVADGPS 793
Query: 714 LLSYGLHCALLAGVPAEVIKRA-AYVLEA-AQNNKHVER 750
SYG+ A LAGVP+ V++RA Y+ EA +N +R
Sbjct: 794 SSSYGVEVAKLAGVPSTVVERAREYIREADGADNGQADR 832
>gi|288925895|ref|ZP_06419825.1| DNA mismatch repair protein MutS [Prevotella buccae D17]
gi|288337319|gb|EFC75675.1| DNA mismatch repair protein MutS [Prevotella buccae D17]
Length = 889
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/601 (26%), Positives = 283/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +KF++LD +L++ Q + ++G S+ ++++ VTPMG R
Sbjct: 268 ITALARIEEDKFVRLDKFTSRSLELLQPMQ----------EDGLSLLDVIDRTVTPMGSR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ +N RL+ + +F + + E + D+ I+ K SP
Sbjct: 318 LLRRWMVFPLKDVRPINERLDIVDYFFKKPDFRVCVDEEFHRMGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFLKSI---CSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + ++ + C + VG SL E LR D ++K +L
Sbjct: 378 REVVQLKNALTAIRPVKMACLSAGNEALKRVGEQLSLCESLR----DRIDKEIQPDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+N+ G ++ + + ELDELR I ++L E+ E+ +
Sbjct: 434 ------------LNK------GDVIADNYSPELDELRSISRHGKDYLLEIQQREIEKTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ + + + GY + + D E ++ A ++ Y T + +
Sbjct: 476 TSLK-----VGFNNVFGYYLEVRNTFKDKVPEEWVRKQTLAQAER--------YITQELK 522
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + KI+ +E + +L+ + F + N A LDC LS A + ++ Y
Sbjct: 523 EYEEKILGADEKIIMLETKLFNELILAMQEFIPQIQIDANLVAHLDCLLSFAKTSEEHRY 582
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
+RP + +LDI+ GRH + E + + ++PND +D ++ +ITGPN +GKS +
Sbjct: 583 VRPTIDESEVLDIKQGRHAVIETQLPIGEQYVPNDVYLDTVKQQVMMITGPNMAGKSALL 642
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV L+ +G FVPA++A +GL D S +++ +S+FM+++ + +L
Sbjct: 643 RQTALIVLLAQVGCFVPAESARIGLVDKIFTRVGASDNISLGESTFMVEMTEASNILNNV 702
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCLPKS 679
+ +SL L DE G+GT T DGI + + Y + L TH EL E P
Sbjct: 703 SGRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPKARARTLFATHYHELNEMEKNFP-- 760
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
R+K Y +SV E N ++FL +L G + S+G+H A +AG+P ++KRA +L
Sbjct: 761 -RIKNYNVSV--KELNGK----VIFLRKLERGGSEHSFGIHVAEIAGMPRSIVKRANVIL 813
Query: 740 E 740
+
Sbjct: 814 K 814
>gi|327402833|ref|YP_004343671.1| DNA mismatch repair protein MutS [Fluviicola taffensis DSM 16823]
gi|327318341|gb|AEA42833.1| DNA mismatch repair protein MutS [Fluviicola taffensis DSM 16823]
Length = 874
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 272/559 (48%), Gaps = 55/559 (9%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G ++F ++N TPMG RLL+ W + P+ E +N R++A++ L A + L
Sbjct: 288 GKTLFNVINGTKTPMGDRLLKRWIVMPLKHEEQINLRIDAVADLTDKHSLRAEIEHELNE 347
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
+ D+ ++ K + L+ + +L S S+ L+ L+
Sbjct: 348 IGDMERLISK------VAVGKIHPKELRVLSRILEHMVPLRDACSHSVSNLLQQLS---- 397
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
++ C +LV ++ + + G G ++ G ELDELR I E ++LE
Sbjct: 398 QRLEPC-----EEFIQLVERMLLKDPAVMLGKGPVIANGVHSELDELRAISESGKDYLEA 452
Query: 383 VASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+ E ++ +P I + + GY + + D E ++ ++
Sbjct: 453 MQERE-------SEKTGIPSLKIAFNNVFGYYLEVRNTHKDKVPEEWIRKQTLVSAER-- 503
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y TP+ +E + + KI +E + +LV + F + + A+LDC
Sbjct: 504 ------YITPELKEYETKILGAEDKISAIEAKLYFELVQKLSAFVGAIQRNAFLIAQLDC 557
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDND-GRINI 556
A +A +NNY +P + ++DI+NGRH + E + ++PND +D + +I +
Sbjct: 558 LTGFADLAIRNNYSKPTINDSYVIDIKNGRHPVIEGQLKAGVEYVPNDVYLDKEEQQIIM 617
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
ITGPN SGKS ++Q ALIV ++ +GSF+PADAA +G+ D S ++++ +S+FM
Sbjct: 618 ITGPNMSGKSALLRQTALIVLMAQMGSFIPADAAILGIVDKVFTRVGASDNISSGESTFM 677
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT--CDVPPKVLVCTH 666
+++++ +L + +SL LLDE G+GT T DGI + I F+ K L TH
Sbjct: 678 VEMNETSSILNNLSDRSLILLDEIGRGTSTYDGIS-IAWAIAEFIHEFPQAKGKTLFATH 736
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
E LNE + + R+ Y +SV + I+FL +LV G + S+G+H A LAG
Sbjct: 737 YHE-LNEMAV-QFPRIHNYNVSV------KEVGQKIIFLRKLVEGGSEHSFGIHVAKLAG 788
Query: 727 VPAEVIKRAAYVLEAAQNN 745
+P +VI+RA +LE + N
Sbjct: 789 MPTKVIQRAELMLEQLELN 807
>gi|301311772|ref|ZP_07217697.1| DNA mismatch repair protein MutS [Bacteroides sp. 20_3]
gi|423337430|ref|ZP_17315174.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL09T03C24]
gi|300830332|gb|EFK60977.1| DNA mismatch repair protein MutS [Bacteroides sp. 20_3]
gi|409237259|gb|EKN30059.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL09T03C24]
Length = 870
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 277/582 (47%), Gaps = 73/582 (12%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
+ D+ I+ K SP + A +K C + +G EQL
Sbjct: 343 QIGDLERIISKVAVGRVSPREVVQLKVALRAIEPIKEACMASEEPSLCRIG------EQL 396
Query: 315 RL--LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ L D +EK + L VN+ G ++ +G +ELD+LR I
Sbjct: 397 NVCALIRDRIEKEINNDPPSL------------VNK------GGIIAKGVNEELDDLRAI 438
Query: 373 YEELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
++L +V +EL +P L I + + GY + + D ++
Sbjct: 439 AYSGKDYLLKVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRK 491
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
++ Y T + +E + + KIL +E + +LV + + +
Sbjct: 492 QTLVNAER--------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQM 543
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTR 547
N +DC LS A A N Y+RP+++ +DI+ GRH + E + + +I ND
Sbjct: 544 NANLIGRIDCLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVY 603
Query: 548 IDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+D++ + I IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S
Sbjct: 604 LDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASD 663
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDV 657
+++ +S+FM+++++ +L TS+SL L DE G+GT T DGI + + Y +
Sbjct: 664 NISVGESTFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNA 723
Query: 658 PPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
K L TH E LNE + ++ +R+K Y +SV N ++FL +L+PG + S
Sbjct: 724 KAKTLFATHYHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHS 774
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
+G+H A +AG+P ++KR+ +L+ ++ E + + A
Sbjct: 775 FGIHVAKMAGMPKSIVKRSNEILKQLESENRQEGIGGKPVKA 816
>gi|227894650|ref|ZP_04012455.1| MutS protein [Lactobacillus ultunensis DSM 16047]
gi|227863545|gb|EEJ70966.1| MutS protein [Lactobacillus ultunensis DSM 16047]
Length = 866
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 275/585 (47%), Gaps = 59/585 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 250 VNQYLQMSHTVQNNLELIASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + + + +
Sbjct: 302 PLLNVDEINHREEMVQALLDGYFTRENAIDALKGVYDLERLTGRI-----AFGNVNAREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + L + D++E A I L V E++ + +
Sbjct: 357 LQLSRSLQAVPVILDA---------LNQSDSDVLEDFAKKIDP-LKGVAEMISTTLVKDP 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G L+R+G +LD R ++L A +E + E + Y
Sbjct: 407 PLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWL---AQMEADERQKTGIENL--KVGYNKV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + L++ ++ T Y TP+ +E +NL+ + + D
Sbjct: 462 FGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRSTD 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLDIQ 527
+E + L + + L K + A LD + A VA QNNY RP T +D+
Sbjct: 515 LEYDLFVKLREEVKKYIPALQKLGSQLAALDVYCGFATVAEQNNYCRPHFHTDNQDIDVV 574
Query: 528 NGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI ++ IGSFV
Sbjct: 575 NGRHPVVEKVMTAGSYIPNDVKMDTGTDIFLITGPNMSGKSTYMRQMALIAIMAQIGSFV 634
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 635 PADSADLPVFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGTA 694
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENN 695
T DG+ L G + Y V K L TH EL L+E + LK + V E N
Sbjct: 695 TYDGMALAGAIVKYL-HDKVGAKALFATHYHELTDLDETL----DHLK--NIHVGATEEN 747
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 748 GK----LIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLK 788
>gi|121533677|ref|ZP_01665504.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
gi|121307668|gb|EAX48583.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
Length = 861
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 290/604 (48%), Gaps = 84/604 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
++ ++ + +F+ +D A L+I + ++ G K+ ++ +++ T MG R
Sbjct: 252 VNRLMRYNAAEFMTIDTAALRNLEITR------NLRDGGRKD--TLLSILDFTQTAMGGR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W P+L + + R +A+ L + + L E L ++ D+ I+ + +
Sbjct: 304 LLKKWLEYPLLSVHEIIRRQDAVDELLTNPGVRQVLQEKLGHIYDLERIVTRAEVGT--A 361
Query: 281 TASDWTAFLKSICSL----LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
D A +S+ SL LHV + Q LL E A T
Sbjct: 362 NGRDLIALKQSLSSLPTIKLHVQSM-----------QSALLG----EIGAKMET------ 400
Query: 337 YELVIGIIDV----NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQ 390
YE ++ +ID N G +++ G+ ELDELR+I ++ ++L E E
Sbjct: 401 YEDIVALIDRAIVDNPPHSVRDGGIIKTGYNQELDELREIAQDSQQWLMAFEAREKERTG 460
Query: 391 LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ L + Y GY + + E ++ ++ Y TP
Sbjct: 461 IKSLK-------VGYNKVFGYYIEVTNANRAAVPSEYIRKQTLTSAER--------YITP 505
Query: 451 KTRELDNLLGDIYHKILDMER---AITRDLVS-HICLFSDHLLKAVNFAAELDCFLSLAL 506
+ +E + + KI+ +E I RD V HI L + A +DC +SL+
Sbjct: 506 ELKEFETKVLGAQEKIVQLEYYLFTIVRDCVKKHI----PRLQETARQLAVIDCLVSLSE 561
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDN-DGRINIITGPNYS 563
A + NY RP +T + I++GRH + E +D F+PNDT +++ D + IITGPN +
Sbjct: 562 AAARYNYRRPAITNNREIIIRDGRHPVVERLLDREVFVPNDTELNHHDCEVMIITGPNMA 621
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS Y++QVAL+V ++ +GSF+PA A + D S + QS+FM+++++V
Sbjct: 622 GKSTYMRQVALLVLMAQVGSFIPAREAAITPVDRIFTRVGASDDLATGQSTFMVEMNEVA 681
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
+L+ AT+ SL +LDE G+GT T DG+ + I Y + + K L TH EL
Sbjct: 682 HILKHATTNSLVILDEIGRGTSTFDGMSIARAVIEY-IKDRIKAKTLFATHYHELTE--L 738
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ + +K +T++V E S ++VFL R+VPG A SYG+H A LAG+P +VI+RA
Sbjct: 739 AEQKKGIKNFTVAV--KERGS----EVVFLRRIVPGGADKSYGIHVARLAGLPKKVIERA 792
Query: 736 AYVL 739
+L
Sbjct: 793 QTIL 796
>gi|417646303|ref|ZP_12296164.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU144]
gi|329728032|gb|EGG64476.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU144]
Length = 873
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 295/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V+ K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VSQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDNQ 799
>gi|88801798|ref|ZP_01117326.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
gi|88782456|gb|EAR13633.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
Length = 870
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 157/572 (27%), Positives = 281/572 (49%), Gaps = 73/572 (12%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
++ +++K ++PMG RLL+ W P+ +++++ R + FF+ S+E ++ LK
Sbjct: 287 AITLLDVIDKTISPMGGRLLKRWLALPLKNIKDIKKRHELVKFFIDSDEFSKTVTYQLKQ 346
Query: 263 VKDIPHILKKF----NSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN 318
+ D+ ++ K +SP I D S+ ++L + E + +++E L+
Sbjct: 347 ISDLERLISKVATAKSSPREIVLLKD------SLKAILPIKSAAEKSKNSTVKELGNQLH 400
Query: 319 F--DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
D++EK + +++N+ G + G ELDELR I
Sbjct: 401 HATDLIEKITETLFENAP---------VNINK------GNAIATGVHGELDELRAISTSG 445
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIV-----YIHQIGYLMCIFEEKLDDTTLEQLQGF 431
++L+ + L +E + I + + GY + + D ++
Sbjct: 446 KDYLDAM----------LARETEITGITSLKISFNNVFGYFIEVRNAHKDKVPETWIRKQ 495
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
++ Y T + +E + + KI +E+ I L+ +I F + +
Sbjct: 496 TLVNAER--------YITEELKEYETKILGAEDKIQKLEQEIFSKLLQYIIQFVQIVQEN 547
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVD-TFIPNDTRI 548
A++DC LS +++A NNY+RP + L+I+NGRH + +++ +D T++ ND +
Sbjct: 548 AQIIAKIDCLLSFSVLAIDNNYVRPSMDESTDLEIKNGRHPVIEKQLPIDQTYVANDVVL 607
Query: 549 D-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKH 599
+ +I +ITGPN SGKS ++Q ALIV L+ +GS+VPA A +G+ D S +
Sbjct: 608 NRKQQQIIMITGPNMSGKSAILRQTALIVLLAQMGSYVPAQNAKIGIVDKIFTRVGASDN 667
Query: 600 MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPP 659
++ +S+FM+++++ +L + +SL LLDE G+GT T DGI + +
Sbjct: 668 ISMGESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISIAWAITEFLHEHPSKA 727
Query: 660 KVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHALLSYG 718
K L TH E LNE ER+K + +SV +++D I+FL +LV G + S+G
Sbjct: 728 KTLFATHYHE-LNE-MTTTFERIKNFNVSV-------KELKDTIIFLRKLVSGGSNHSFG 778
Query: 719 LHCALLAGVPAEVIKRAAYVL-EAAQNNKHVE 749
+H A LAG+P VI RA +L + +NNK+ E
Sbjct: 779 IHVAKLAGMPNMVIHRANKILMQLEKNNKNAE 810
>gi|357419712|ref|YP_004932704.1| DNA mismatch repair protein MutS [Thermovirga lienii DSM 17291]
gi|355397178|gb|AER66607.1| DNA mismatch repair protein MutS [Thermovirga lienii DSM 17291]
Length = 862
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 271/605 (44%), Gaps = 83/605 (13%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
L +D + + L++ + DK ++F ++N+C TPMG+RLL+ W L P++D
Sbjct: 263 LIMDYSTQKNLELIEGDK-------------LTLFSVLNRCGTPMGKRLLKEWLLHPLVD 309
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAF 288
E + R + + L + + L E L D L + +P + D
Sbjct: 310 HEQIRKRHDGVEKLLQNWTELQRLREVLSSCGDAEKALSRLGMGLGAPRDLGVIRDTLGV 369
Query: 289 LKSICSLLHVNKIFEV----GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
L + ++ I EV G LR +L E A EL I
Sbjct: 370 LPGVMEVVRGAFIDEVLDIPGDPRDLRAKL-----------------ESALCDELPKNIK 412
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D G ++REGF ELD LR + E L A LE + K M I
Sbjct: 413 D---------GNVIREGFDQELDSLRYLRSHSGEELN--AILEREREKTGIKNM---KIG 458
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
+ GY + I + LD Q + + + GE R K E + DI
Sbjct: 459 FNKVFGYYLEISKSYLDKVP----QNYIRKQTLVGGE--RFITEELKELEEKLMTLDI-- 510
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+I E+ + LV + S + +F A LD S A+ A + NY+RP + ++
Sbjct: 511 QIEAREKVLYESLVQEVLENSSTIQDISDFIATLDVLCSFAVKARECNYVRPAINDGYVI 570
Query: 525 DIQNGRHVLQEMTVDT---FIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSH 580
+++ RH + E + + F PND +D+ G RI I+TGPN +GKS Y++ AL+V ++
Sbjct: 571 ALRDARHPVVEEALGSRAPFTPNDVLLDSYGKRIAIVTGPNMAGKSTYLRMAALLVIMAQ 630
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
GSFVPA A +G+ D + +S+FM+++ + +LR T +SL +LDE
Sbjct: 631 AGSFVPASKAEIGIIDRIFSRIGAKDELARGKSTFMVEMVETANILRNVTPRSLVILDEI 690
Query: 633 GKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVL 690
G+GT T DGI + + Y CD PKVL TH EL + LP + +S+
Sbjct: 691 GRGTSTYDGISIAWAVLEYLHKVCDGMPKVLFATHYHELASLADSLP-----GLFNLSLA 745
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
E + IVFLY+L P A SYG+ A LAGVP VIKR+ +L + ++ +
Sbjct: 746 VEETE----KGIVFLYKLEPQPADKSYGVEVAKLAGVPEAVIKRSMELLRRFEEERNFKE 801
Query: 751 WSHEN 755
E
Sbjct: 802 LGGEG 806
>gi|335045167|ref|ZP_08538190.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
gi|333758953|gb|EGL36510.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
Length = 907
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 292/616 (47%), Gaps = 76/616 (12%)
Query: 165 IEVSLNK-FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
IE NK ++ +D+ + L++++T + G ++ +++ T MG R+LR
Sbjct: 259 IEYFQNKDYMIVDSYSQRNLELWETLREKKKRG--------TLLWVLDYTKTAMGSRMLR 310
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
++ RP+ D + + +RL+A+ F M L E L + DI +L + + + A
Sbjct: 311 HFLERPLRDKKKIEARLDAVEEFNGHYIDMEELREYLDSIYDIERLLSRISLST--ANAR 368
Query: 284 DWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D A S+ L + K F+ + +RE+L L DI K I E
Sbjct: 369 DLLALKLSLQYLPDIKKALLPFQSSLLSKMREELDCLE-DIYRKIEEEIVEEPP------ 421
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-----LVQLPHLC 395
+ V G L++ F ++++ R E+L+E+ + E + L
Sbjct: 422 ---LSVKE------GGLIKASFSKDVEDYRNAGVNGKEWLQELEAREREKTGIKNLKIKY 472
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+F C + Y I + + TL Q GE Y T + EL
Sbjct: 473 NRIFGYC--FEVSKAYQGEIPDYFIRRQTLAQ------------GER----YITTELEEL 514
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
N + K+ D+E A+ L I + K A LD +LSLA +A + NY+R
Sbjct: 515 QNRILGAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYLSLAKLAIKENYVR 574
Query: 516 PILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P L+ L I+ GRH + E ++ FIPNDT ++ + I IITGPN +GKS Y++QVA
Sbjct: 575 PRLSEGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIAIITGPNMAGKSTYMRQVA 634
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LIV LS IGSFVPA A + + D S + QS+FM+++ +V +LR AT QS
Sbjct: 635 LIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATKQS 694
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L +LDE G+GT T DG+ + + Y + + K L TH EL EG L +K
Sbjct: 695 LLILDEIGRGTSTFDGLSIAWAVVEY-IARHIQAKTLFATHYHELTELEGKL---NNVKN 750
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y ++V + + +I FL +++PG A SYG+ A LAGVP V+ RA + +
Sbjct: 751 YCIAVSKKDG------EISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAFLSD 804
Query: 745 NKHVERWSHENISAQD 760
N ++ ++NI A++
Sbjct: 805 NDFMQ--ENKNIVAKE 818
>gi|189460181|ref|ZP_03008966.1| hypothetical protein BACCOP_00817 [Bacteroides coprocola DSM 17136]
gi|189433042|gb|EDV02027.1| DNA mismatch repair protein MutS [Bacteroides coprocola DSM 17136]
Length = 874
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 172/626 (27%), Positives = 296/626 (47%), Gaps = 86/626 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGR 219
I S+ + +K+++LD +L++ IG EG S+ +++ ++PMG
Sbjct: 255 ITSLARIEEDKYVRLDKFTVRSLEL-----------IGSMNEGGTSLLDVIDHTISPMGA 303
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
RLL+ W + P+ D++ +N RL+ + +F + + E L + D+ I+ K S
Sbjct: 304 RLLKRWIVFPLKDVKPINERLDVVEYFFREPDFKDFIEEKLHLIGDLERIVSKAAVGRIS 363
Query: 276 PSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCIT 330
P + A +K+ C L+ + +ESLR+ LN I +K A I
Sbjct: 364 PREVVQLKVALQAIEPIKNAC--LNAD-------NESLRKIGEQLNLCASIRDKIAKEIN 414
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--L 388
+ + VN+ G ++ +G ELDELR I ++L +V E L
Sbjct: 415 NDPPLL---------VNK------GGVIADGVNQELDELRHIAYSGKDYLLQVQQRESEL 459
Query: 389 VQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
+P L I Y + GY + + D + ++ ++ Y
Sbjct: 460 TGIPSLK-------IAYNNVFGYYIEVRNTHKDKVPADWIRKQTLVNAER--------YI 504
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
T + +E + + KIL +E + +LV+ + F + A LDC LS A A
Sbjct: 505 TQELKEYEEKILGAEDKILILETRLYNELVAELADFIPAIQINATQIARLDCLLSFANAA 564
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSG 564
N Y+RP++ + +LDI+ GRH + E + + +I ND +D + + I IITGPN +G
Sbjct: 565 RANKYIRPVVADDDILDIKQGRHPVIEKQLPAGEKYIANDVYLDTETQQIIIITGPNMAG 624
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS ++Q ALI ++ IG FVPA++A +GL D S +++ +S+FM+++++
Sbjct: 625 KSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAAD 684
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EG 674
+L + +SL L DE G+GT T DGI + + + + L TH EL + E
Sbjct: 685 ILNNLSPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHKRARARTLFATHYHELNDMEE 744
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
P R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KR
Sbjct: 745 SFP---RIKNYNVSVKEVDNK------VIFLRKLERGGSEHSFGIHVAKMAGMPKTIVKR 795
Query: 735 AAYVL-EAAQNNKHVERWSHENISAQ 759
A +L + + N+ SH + +
Sbjct: 796 ADEILHQLEKENRQEGMSSHHKVEPK 821
>gi|417913342|ref|ZP_12557009.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU109]
gi|341655624|gb|EGS79348.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU109]
Length = 715
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 77 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 128
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 129 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 186
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 187 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 239
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 240 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 288
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 289 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 340
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 341 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 400
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 401 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 460
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 461 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 520
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 521 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 579
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 580 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 630
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 631 YQLSHENTDNQ 641
>gi|418622020|ref|ZP_13184776.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU123]
gi|374827395|gb|EHR91257.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU123]
Length = 873
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 295/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + ++ +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKKGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|322388728|ref|ZP_08062325.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|419844218|ref|ZP_14367517.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
gi|321140347|gb|EFX35855.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|385702104|gb|EIG39255.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
Length = 844
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 175/631 (27%), Positives = 288/631 (45%), Gaps = 82/631 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDFATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++DL+ + R + FL + L E+LK V DI + + SF +
Sbjct: 293 SWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTESLKGVYDIERLASRV---SFGKSNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + + I+ +A
Sbjct: 350 KDLLQLATTLGSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELENLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 404 HVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 NTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
G++ K ++E I + + + L A +D LA+VA + +R
Sbjct: 497 EGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVLQGLAVVAENQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P E +DIQNGRH + E M T+IPN ++D D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGQESRIDIQNGRHAVVEKVMGAQTYIPNSIQMDEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 ITAVMAQMGSYVPAESAQLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLEASLEHLVNVHV 735
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
T+ E N + FL+++ PG A SYG+H A +AG+PA+++KRA +L
Sbjct: 736 ATL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPADLLKRADAIL----- 781
Query: 745 NKHVERWSHENISAQDQQYKNAV-EKMLAFD 774
+E EN + +Q +N V E+M FD
Sbjct: 782 -TQLESQGQENPISINQ--RNVVNEQMSLFD 809
>gi|417909951|ref|ZP_12553684.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU037]
gi|341652560|gb|EGS76348.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU037]
Length = 715
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 77 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 128
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 129 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 186
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 187 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 239
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 240 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 288
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 289 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 340
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 341 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 400
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 401 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 460
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 461 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 520
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 521 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 579
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 580 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 630
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 631 YQLSHENTDDQ 641
>gi|310642433|ref|YP_003947191.1| DNA mismatch repair protein muts [Paenibacillus polymyxa SC2]
gi|386041503|ref|YP_005960457.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|309247383|gb|ADO56950.1| DNA mismatch repair protein MutS [Paenibacillus polymyxa SC2]
gi|343097541|emb|CCC85750.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 966
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 283/587 (48%), Gaps = 67/587 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD L++ +T + R+K+G S+ ++++ T MG RLLR W +P
Sbjct: 281 NHFMILDPFTRRNLELVETVRE-------RSKKG-SLLWLLDRTETSMGARLLRRWIDKP 332
Query: 230 ILDLENLNSRLNAISF----FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+L + RL A+ F+ E++ A L E + D+ ++ + S A D
Sbjct: 333 LLSSNLIEERLEAVDKLYHQFIFREDVRAQLKE----IYDLERLVGRIAFGS--ANARDL 386
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
A S+ + + ++ +ES LR + + A C E A E I + D
Sbjct: 387 IALKLSLAQIPSLREL----CAESPSNTLRRIAQTLDSCADLCTLIEEAVADEPPISVRD 442
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVY 405
G L++EG+ LDELR+ ++ E+ + E V + I Y
Sbjct: 443 ---------GGLIKEGYHQRLDELREASVNGKRWIAELEAKERV-----ATGIRSLKIGY 488
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + ++ + L L + +R Y TP+ +E ++L+ + K
Sbjct: 489 NKVFGYYI-----EVTKSNLASLPEGRYERKQTLANAER--YITPELKEKESLILEAEDK 541
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
++D+E + +L S + L K AE+D + SLA V+ + +++P LT
Sbjct: 542 MVDLEYTLFSELRSKLNAEIPRLQKLAEQVAEIDVYQSLATVSAERGFVKPELTTGYDFV 601
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
++ GRH + E M FI N+T ++ D I +ITGPN +GKS Y++QVALI ++ IG
Sbjct: 602 VEQGRHPVVEAVMKDGGFIANNTVLEEADAHILLITGPNMAGKSTYMRQVALIAIMAQIG 661
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
FVPA A V + D + + QS+FM+++ + +M +AT +SL ++DE G+
Sbjct: 662 CFVPAARAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDELGR 721
Query: 635 GTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRP 692
GT T +G+ + I FV + K LV TH EL L +G L+ Y+M+V
Sbjct: 722 GTSTSEGMAIAQAVIE-FVHDTIGCKALVSTHFHELAHLEQGLTS----LRNYSMAV--- 773
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
S D + FL +L+PG A SYG++CA LAG+P +I+RA +L
Sbjct: 774 -QESGD--KVNFLRKLIPGAASSSYGIYCARLAGLPNNIIERANGLL 817
>gi|293366740|ref|ZP_06613416.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319041|gb|EFE59411.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 877
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 239 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 290
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 291 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 348
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 349 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 401
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 402 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 450
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 451 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 502
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 503 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 562
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 563 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 622
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 623 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 682
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 683 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 741
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 742 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 792
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 793 YQLSHENTDDQ 803
>gi|298373977|ref|ZP_06983935.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_19]
gi|298268345|gb|EFI10000.1| DNA mismatch repair protein MutS [Bacteroides sp. 3_1_19]
Length = 870
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 277/573 (48%), Gaps = 55/573 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + + LK +L + I E ++ R I
Sbjct: 343 QIGDLERIISKV---AVGRVSPREVVQLK--VALRAIEPIKEACMASGEPSLCR-----I 392
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ +C A + + + I+ + G ++ +G +ELD+LR I ++L
Sbjct: 393 GEQLNAC-----ALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDDLRAIAYSGKDYLL 447
Query: 382 EVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+V +EL +P L I + + GY + + D ++ ++
Sbjct: 448 KVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRKQTLVNAER- 499
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E + + KIL +E + +LV + + + N +D
Sbjct: 500 -------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
C LS A A N Y+RP+++ +DI+ GRH + E + + +I ND +D++ + I
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQII 612
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S +++ +S+F
Sbjct: 613 IITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGESTF 672
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++++ +L TS+SL L DE G+GT T DGI + + Y + K L TH
Sbjct: 673 MVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFATH 732
Query: 667 LTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
E LNE + ++ +R+K Y +SV N ++FL +L+PG + S+G+H A +A
Sbjct: 733 YHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHSFGIHVAKMA 783
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G+P ++KR+ +L+ ++ E + + A
Sbjct: 784 GMPKSIVKRSNEILKQLESENRQEGIGGKPVKA 816
>gi|251810727|ref|ZP_04825200.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
BCM-HMP0060]
gi|251805887|gb|EES58544.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
BCM-HMP0060]
Length = 877
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 239 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 290
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 291 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 348
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 349 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 401
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 402 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 450
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 451 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 502
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 503 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 562
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 563 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 622
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 623 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 682
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 683 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 741
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 742 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 792
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 793 YQLSHENTDNQ 803
>gi|27467892|ref|NP_764529.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis ATCC
12228]
gi|57866808|ref|YP_188445.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis RP62A]
gi|282876272|ref|ZP_06285139.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis SK135]
gi|418607717|ref|ZP_13170940.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU057]
gi|418609872|ref|ZP_13173006.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU065]
gi|418612180|ref|ZP_13175226.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU117]
gi|418626780|ref|ZP_13189376.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU126]
gi|420165170|ref|ZP_14671874.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM088]
gi|420172705|ref|ZP_14679203.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM067]
gi|420193967|ref|ZP_14699796.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM021]
gi|420234455|ref|ZP_14739018.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051475]
gi|421607202|ref|ZP_16048448.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
AU12-03]
gi|38258089|sp|Q8CPF0.1|MUTS_STAES RecName: Full=DNA mismatch repair protein MutS
gi|71151981|sp|Q5HPP5.1|MUTS_STAEQ RecName: Full=DNA mismatch repair protein MutS
gi|27315437|gb|AAO04571.1|AE016747_68 DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57637466|gb|AAW54254.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis RP62A]
gi|281295297|gb|EFA87824.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis SK135]
gi|374403834|gb|EHQ74829.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU057]
gi|374406208|gb|EHQ77111.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU065]
gi|374820062|gb|EHR84176.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU117]
gi|374831324|gb|EHR95066.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU126]
gi|394236337|gb|EJD81871.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM088]
gi|394241382|gb|EJD86796.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM067]
gi|394266665|gb|EJE11290.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM021]
gi|394304258|gb|EJE47665.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051475]
gi|406656994|gb|EKC83387.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
AU12-03]
Length = 873
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDNQ 799
>gi|333029553|ref|ZP_08457614.1| DNA mismatch repair protein mutS [Bacteroides coprosuis DSM 18011]
gi|332740150|gb|EGJ70632.1| DNA mismatch repair protein mutS [Bacteroides coprosuis DSM 18011]
Length = 876
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 168/602 (27%), Positives = 292/602 (48%), Gaps = 79/602 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +KF++LD +L++ + M G G S+ +++K +TPMG R
Sbjct: 254 ITTLSRIEEDKFVRLDKFTIRSLELLNS------MNDG----GSSLLQVIDKTITPMGGR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LL+ W + P+ ++ +N+RL+ + +F + + L + D+ I+ K SP
Sbjct: 304 LLKRWVVFPLKEVNAINNRLDVVDYFFKQPSFKEIITDQLHLIGDLERIISKVAVGRVSP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ A +K C + + +G +L E++R D ++K L
Sbjct: 364 REVVQLKVALQAIEPIKKACLNANDASLNRIGDQLNLCEKIR----DRIDKEIENDPPML 419
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
VN+ G ++ G +ELD+LR+I ++L ++ E+
Sbjct: 420 ------------VNK------GHVICSGVNEELDDLRKIAYSGKDYLLQIQQREI----- 456
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+E +P I Y + GY + + D E ++ ++ R K
Sbjct: 457 --EETGIPSLKIAYNNVFGYYIEVRNTHKDKVPKEWIRKQTLVSAE------RYITQELK 508
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
E + +LG KIL +E + +LV+ + + + N A LDC LS + +A N
Sbjct: 509 VYE-EKILG-AEEKILILEAKLFEELVTDLAEYISAIQLNANQIAALDCLLSFSSIAQLN 566
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSI 567
Y+RP++ + +L IQ GRH + E + + +I ND +DN + I +ITGPN SGKS
Sbjct: 567 KYIRPVIQDDDVLSIQQGRHPVIEKELPLGEQYIANDVYLDNTTQQIIMITGPNMSGKSA 626
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI ++ IG FVPA++A +GL D S +++ +S+FM+++++ +L
Sbjct: 627 LLRQTALITLMAQIGCFVPAESAQIGLVDKIFTRVGASDNISMGESTFMVEMNEAANILN 686
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPK 678
+S+SL L DE G+GT T DGI + + Y + K L TH E LNE + K
Sbjct: 687 NLSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHNNPNNRAKTLFATHYHE-LNE--MEK 743
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KR+
Sbjct: 744 SFDRIKNYNVSVKEIDNK------VIFLRKLKRGGSEHSFGIHVAKMAGMPPSIVKRSNE 797
Query: 738 VL 739
+L
Sbjct: 798 IL 799
>gi|161506972|ref|YP_001576926.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DPC
4571]
gi|172048182|sp|A8YTH9.1|MUTS_LACH4 RecName: Full=DNA mismatch repair protein MutS
gi|160347961|gb|ABX26635.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 858
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 281/592 (47%), Gaps = 73/592 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 242 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 293
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 294 PLLNVDIINHREKMVQALLDGYFTRENTIDALKGVYDLERLTGRI--------------- 338
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI---ID 345
+ +VN + +S SL+ +L D + ++ S + T+ A + + G+ I
Sbjct: 339 -----AFGNVNARELLQLSRSLQAVPVIL--DALNQSDSDVLTDFAKKIDPLKGVAELIS 391
Query: 346 VNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
K+ G L+R+G +LD R ++L ++ + E K
Sbjct: 392 TTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDER------QKTGIEN 445
Query: 402 CIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
V +++ GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 446 LKVGFNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLIL 498
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-T 519
+ + D+E + L + + L K N A LD + A VA QNNY RP T
Sbjct: 499 EAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPSFHT 558
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+D+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI
Sbjct: 559 DSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAI 618
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 619 MAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLF 678
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY-TMS 688
DE G+GT T DG+ L G + Y + V K L TH EL + E L + +
Sbjct: 679 DEIGRGTATYDGMALAGAIVKY-LHDKVGAKALFATHYHELTS-----LDETLDYLKNIH 732
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 733 VGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLK 780
>gi|150009585|ref|YP_001304328.1| DNA mismatch repair protein MutS [Parabacteroides distasonis ATCC
8503]
gi|189083164|sp|A6LG92.1|MUTS_PARD8 RecName: Full=DNA mismatch repair protein MutS
gi|149938009|gb|ABR44706.1| putative DNA mismatch repair protein MutS [Parabacteroides
distasonis ATCC 8503]
Length = 870
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 278/573 (48%), Gaps = 55/573 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + + LK +L + I E ++ R I
Sbjct: 343 QIGDLERIISKV---AVGRVSPREVVQLK--VALRAIEPIKEACMASGEPSLCR-----I 392
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ +C A + + + I+ + G ++ +G +ELD+LR I ++L
Sbjct: 393 GEQLNAC-----ALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDDLRAIAYSGKDYLL 447
Query: 382 EVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+V +EL +P L I + + GY + + D ++ ++
Sbjct: 448 KVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRKQTLVNAER- 499
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E + + KIL +E + +LV + + + N +D
Sbjct: 500 -------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
C LS A A N Y+RP+++ +DI+ GRH + E + + +I ND +D++ + I
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQII 612
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S +++ +S+F
Sbjct: 613 IITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGESTF 672
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++++ +L TS+SL L DE G+GT T DGI + + Y + K L TH
Sbjct: 673 MVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFATH 732
Query: 667 LTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
E LNE + ++ +R+K Y +SV N ++FL +L+PG + S+G+H A +A
Sbjct: 733 YHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHSFGIHVAKMA 783
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G+P ++KR+ +L+ ++ E + + + A
Sbjct: 784 GMPKSIVKRSNEILKQLESENRQEGITGKPVKA 816
>gi|418664779|ref|ZP_13226245.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU081]
gi|374410225|gb|EHQ80986.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU081]
Length = 877
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 239 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 290
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 291 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 348
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 349 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 401
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 402 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 450
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 451 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 502
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 503 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 562
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 563 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 622
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 623 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 682
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 683 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 741
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 742 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 792
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 793 YQLSHENTDNQ 803
>gi|417937045|ref|ZP_12580351.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
gi|343399487|gb|EGV12009.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
Length = 844
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 274/595 (46%), Gaps = 73/595 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDFATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++DL+ + R + FL + L E+LK V DI + + SF +
Sbjct: 293 SWIQRPLIDLDRIIERQEVVQVFLDYFFERSDLTESLKGVYDIERLASRV---SFGKSNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + + I+ +A
Sbjct: 350 KDLLQLATTLGSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELENLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
+I G ++R GF D LD+ R++ E ++ E+ + E +
Sbjct: 404 HLIT-----------EGGIIRTGFDDTLDKYRRVLREGTSWIAEIEAKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 NTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
G++ K ++E I + + + L A +D LA+VA + + +R
Sbjct: 497 EGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVLQGLAVVAEKQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P E +DIQNGRH + E M T+IPN ++D D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGQESRIDIQNGRHAVVEKVMGAQTYIPNSIQMDEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 ITAVMAQMGSYVPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAINHATKDS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLEASLEHLVNVHV 735
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
T+ E N + FL+++ PG A SYG+H A +AG+PA+++KRA +L
Sbjct: 736 ATL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPADLLKRADAIL 781
>gi|260881009|ref|ZP_05403375.2| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
gi|260850167|gb|EEX70174.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
Length = 876
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/586 (26%), Positives = 281/586 (47%), Gaps = 58/586 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
LN+ + LDA+ + + + + + ++ +++ T MG RLL+ W
Sbjct: 256 LNQLMYLDASENLVVDTYTLRNLEITRNLRDGGKKNTLLDVLDFTETAMGSRLLKKWLEY 315
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L + + RL+A+ + L + E + + D +L + + A D A
Sbjct: 316 PLLSIAGITQRLDAVGELVGDFSLRGGVREGCREIHDFERLLTRIEVGT--ANARDLIAL 373
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
S+ L +RE+L+ ++++A + + T +++++ +++
Sbjct: 374 KISLRCL------------PGIREKLQGAKSSMLKQAEAKVET-----FDVLVDLLERAI 416
Query: 349 SKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
++ G G +++ G+ +ELDE R+I + L+E+ E Q + I
Sbjct: 417 VEDPGISLREGGIIKSGYNEELDEYRRISHDSKAMLQEIEEREKEQTG-----IKALKIG 471
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + D ++ A ++ Y T + +E + +
Sbjct: 472 YNKVFGYYIEVRHSGADRVPDRYIRKQTLANAER--------YITEELKEFETKILGAQE 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
KI+++E + ++ I + + + A +D SLA A NY+RP + + ++
Sbjct: 524 KIVNIEYNLFTEVRETIKAHLTEIQQTAHEIALVDVLASLAEAASSYNYVRPQMRTDGVI 583
Query: 525 DIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
DI++GRH L E +T D F+PND +D+ D I +ITGPN +GKS Y++QVAL+ ++ I
Sbjct: 584 DIKDGRHPLVERILTRDLFVPNDAHLDHQDCEIMLITGPNMAGKSTYMRQVALLTLMAQI 643
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSF+PA A++ D S + + QS+FM+++++V +L+ AT SL +LDE G
Sbjct: 644 GSFIPAREASISPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILKYATKDSLVILDEIG 703
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + I + + V K L TH EL + + +++K + ++V
Sbjct: 704 RGTSTFDGMSIARAVIEH-IEKKVHAKTLFATHYHELTD----LEDDKIKNFCVAVKERG 758
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
N + FL R+VPG A SYG+H A LAG+P V RA +L
Sbjct: 759 NQ------VAFLRRIVPGAADKSYGIHVARLAGLPKSVTSRAEEIL 798
>gi|218258632|ref|ZP_03474960.1| hypothetical protein PRABACTJOHN_00615 [Parabacteroides johnsonii
DSM 18315]
gi|218225307|gb|EEC97957.1| hypothetical protein PRABACTJOHN_00615 [Parabacteroides johnsonii
DSM 18315]
Length = 895
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/609 (27%), Positives = 291/609 (47%), Gaps = 63/609 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +++++LD +L++ T +EG S+ +++K V+PMG R
Sbjct: 268 ITSLSRIEEDRYVRLDKFTVRSLELVST----------MNEEGTSLLDVLDKTVSPMGSR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR W L P+ D++ ++ R + + +F E+ L E L+ + D+ I+ K +
Sbjct: 318 MLRRWILFPLKDVKPIHERQDVVEYFFRHPEVKELLEEKLEQIGDLERIISKV---AVGR 374
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ LK +L + I E ++ R I E+ +C A + + +
Sbjct: 375 VSPREVVQLK--VALRAIEPIKEACMASDEPSLCR-----IGEQLNAC-----ALIRDRI 422
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEM 398
I+ + G ++ G ELDELR I ++L +V + +EL + L
Sbjct: 423 EKEINNDPPSLLNRGGVIATGVNAELDELRAIAYSGKDYLLKVQAREIELTGISSLK--- 479
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + + GY + + D E ++ ++ Y T + +E +
Sbjct: 480 ----IGFNNVFGYYIEVRNAYKDKVPAEWIRKQTLVNAER--------YITEELKEYEEK 527
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ KIL +E + +LV + + + N LDC LS A VA N Y+RP +
Sbjct: 528 ILGAEEKILSLEARLFNELVLCLSEYIPPIQMNANLIGRLDCLLSFAKVAEINCYIRPDV 587
Query: 519 TLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVAL 574
++DI+ GRH + E + + +I ND +D++ + I IITGPN +GKS ++Q AL
Sbjct: 588 NDSQVIDIKAGRHPVIEKQLPIGEPYIANDVYLDDEKQQIIIITGPNMAGKSALLRQTAL 647
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
I +S IG FVPA+ A +G+ D S +++ +S+FM+++++ +L +S+SL
Sbjct: 648 ITLMSQIGCFVPAECAHIGIVDKIFTRVGASDNISVGESTFMVEMNEASDILNNMSSRSL 707
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L DE G+GT T DGI + + Y + K L TH E LNE +R+K Y
Sbjct: 708 VLFDELGRGTSTYDGISIAWAIVEYIHEHPNARAKTLFATHYHE-LNE-METSFKRIKNY 765
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
+SV N ++FL +LVPG + S+G+H A +AG+P ++KR+ +L+ +
Sbjct: 766 NVSVKEVNNK------VIFLRKLVPGGSEHSFGIHVAKMAGMPKSIVKRSNEILKQLETE 819
Query: 746 KHVERWSHE 754
E + E
Sbjct: 820 NRQEGIATE 828
>gi|76800921|ref|YP_325929.1| DNA mismatch repair protein MutS [Natronomonas pharaonis DSM 2160]
gi|76556786|emb|CAI48360.1| DNA mismatch repair protein MutS [Natronomonas pharaonis DSM 2160]
Length = 877
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/614 (28%), Positives = 273/614 (44%), Gaps = 107/614 (17%)
Query: 183 LQIFQTDKHPSHMGIGR---------AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LQ + D H S G + + G ++F ++ T GRRLL W RP+
Sbjct: 249 LQAYAPDDHVSLDGTTQRNLELTEPMTEGGQTLFATVDHTETSAGRRLLEAWLKRPLKRR 308
Query: 234 ENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC 293
L+ R A++ + +L ETL D+ + + + +D A L++
Sbjct: 309 GELDRRQQAVAALVGDALAREALRETLSSAYDLERVASRA-----VAGNADADALLRARE 363
Query: 294 SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVY-ELVIGIIDVNRSKEK 352
+L G+ E LR + ++ AA ++ +A ++ +L + ++ RS+ +
Sbjct: 364 TL---------GLVEDLRTR--------IDDAARLSSSPVADLFADLDVEAVETLRSELE 406
Query: 353 GY----------GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFV 400
G L+R G+ +ELD+L + +E E+ E +A E L H+ +
Sbjct: 407 ALADDPPKTLHEGGLIRRGYDEELDDLVERHETAVEWFETLAEREKRAHGLTHVTVDRNK 466
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
YI Q+G ET + H + L N
Sbjct: 467 TDGYYI-QVGK----------------------------SETDAVPDHYEGIKTLKNAER 497
Query: 461 DIYHKILDMERAITR--------------DLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
++ ++ + ER I R L + ++ L + AELD + SLA
Sbjct: 498 YVFEELREKEREILRLEEVRGDREYEAFCRLRESVADSAELLQRVGRTLAELDVYCSLAA 557
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKS 566
A ++ + RP LT +DI+ GRH + E V F+PND +D + R ++TGPN SGKS
Sbjct: 558 HAAKHGWTRPELTDTRAIDIEAGRHPVVETEV-QFVPNDLYLDRERRFLLVTGPNMSGKS 616
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMML 618
Y++Q ALI L+ +GSFVPAD+A VGL D + +S+FM+++ ++ +L
Sbjct: 617 TYMRQAALITLLAQVGSFVPADSARVGLVDGVFTRVGALDELAQGRSTFMVEMEELSNIL 676
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGC 675
AT SL +LDE G+GT T DGI + Y +V L TH LT L +E
Sbjct: 677 HSATEDSLVILDEVGRGTATYDGISIAWAATEYL-HNEVGAFTLFATHYHELTTLADE-- 733
Query: 676 LPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
LP+ E + PE+ DV FL + PG SYG+H A LAGVP V+ RA
Sbjct: 734 LPRVENVHVAVAG--DPEDGDGDV---TFLRTVEPGATDRSYGVHVADLAGVPDPVVDRA 788
Query: 736 AYVLEAAQNNKHVE 749
VL + ++ VE
Sbjct: 789 GAVLSRLREDRAVE 802
>gi|304383777|ref|ZP_07366236.1| DNA mismatch repair protein MutS [Prevotella marshii DSM 16973]
gi|304335301|gb|EFM01572.1| DNA mismatch repair protein MutS [Prevotella marshii DSM 16973]
Length = 874
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 177/652 (27%), Positives = 311/652 (47%), Gaps = 89/652 (13%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L LE + + + A IT S+ + +++++LD +L++
Sbjct: 236 ASGAILQYLE--------QTQHTHIAHIT--SLARIEEDRYVRLDKFTIRSLELVA---- 281
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
P + EG S+ +++K VTPMG R+L+ W + P+ D + +N RL + ++ +
Sbjct: 282 PMN------DEGASLIDIIDKTVTPMGGRMLKRWVVFPLKDEKPINERLGIVEYYFKKPD 335
Query: 252 LMASLHETLKYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEV 304
L E + D+ I+ K SP + A A +K+ C + +
Sbjct: 336 FRQCLDEQFHRMGDLERIVSKAAVGRVSPREVVQLKNALQALAPVKTACLYAENENLRRI 395
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
G +L E +R E+ I T+ +LV G ++ +G
Sbjct: 396 GERMNLCESIR-------ERIEREICTDPP---QLV------------SKGGVIADGVNS 433
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELDELR+I ++L LE+ + + I Y + GY + + ++
Sbjct: 434 ELDELRRIAYSGKDYL-----LEIQRREAEATGIASLKIGYNNVFGYYLEVRNTYKENVP 488
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+ ++ A ++ Y T + +E + + KIL +E + DLV+ + F
Sbjct: 489 TDWVRKQTLANAER--------YITQELKEYEEKILGAEQKILSLEDRLFADLVTAMQEF 540
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTF 541
+ N A LDC L+ A V+ +N Y+ P + ++DI+ GRH + E + + +
Sbjct: 541 IPQIQIDANLIAHLDCLLAFAKVSEENRYIMPSVDDSDVIDIRQGRHPVIETQLPLGEKY 600
Query: 542 IPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---- 596
+PND +D++ +I IITGPN +GKS ++Q ALIV L+ IG FVPA++A +GL D
Sbjct: 601 VPNDIFLDSERQQIMIITGPNMAGKSALLRQTALIVLLAQIGCFVPAESARIGLVDKIFT 660
Query: 597 ----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF 652
S +++ +S+FM+++ + +L + +SL L DE G+GT T DGI + + Y
Sbjct: 661 RVGASDNLSLGESTFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYL 720
Query: 653 VTCD-VPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ + L TH E LNE + K+ R+K Y +SV ++ ++FL L
Sbjct: 721 HENERAKARTLFATHYHE-LNE--MEKNFARIKNYNVSVKELDDK------VIFLRTLAK 771
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH----VERWSHENISA 758
G + S+G+H A +AG+P ++KRA +L+ +++ VE+ S E I++
Sbjct: 772 GGSEHSFGIHVAQIAGMPKSIVKRANVILKQLESDNSNVGTVEKPSAERINS 823
>gi|420212650|ref|ZP_14717998.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM001]
gi|394279611|gb|EJE23917.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM001]
Length = 873
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|345884830|ref|ZP_08836230.1| DNA mismatch repair protein mutS [Prevotella sp. C561]
gi|345042329|gb|EGW46430.1| DNA mismatch repair protein mutS [Prevotella sp. C561]
Length = 886
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/626 (26%), Positives = 291/626 (46%), Gaps = 82/626 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + +K++++D +L++ P + ++G S+ +++ VTPMG R
Sbjct: 268 ITSLARIEEDKYVRMDRFTIRSLELIA----PMN------EDGSSLLNVIDNTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ D + +N RL+ + + + ++E + D+ I+ K SP
Sbjct: 318 MLRRWMVFPLKDEKPINERLDVVDYLFREPDFRECINEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 SFIYTASDWTAFL---KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + + K+ C + + +G +L E LR D +EK +L
Sbjct: 378 REVVQLKNALMAIQPVKTACLYAKSDTLKRIGEQLNLCESLR----DRIEKEIQADPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ G+ ELD+LR I + ++L E+ E+ Q
Sbjct: 434 V------------------AKGNVIALGYNQELDDLRSIRDNGKQYLLEIQEKEVEQTGI 475
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ I + + GY + + F++K+ + + + + +R Y TP
Sbjct: 476 TSLK-----IGFNNVFGYYLEVRNTFKDKVPENWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KIL +E + +L+ + F + N A LDC LS V+
Sbjct: 520 ELKEYEEKILGADEKILALETQLYMELIQDMQEFIPQIQINANLIAHLDCLLSFMKVSQM 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYSGKS 566
Y+RP++ +LDI+ GRH + E + + ++PND +D + +I +ITGPN +GKS
Sbjct: 580 QRYVRPVVDDSEVLDIKQGRHPVIETQLPIGEQYVPNDVLLDTEHQQIMMITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A +G+ D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLN-EGCL 676
T +SL L DE G+GT T DGI + + Y + L TH EL E
Sbjct: 700 NNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHSRAQARTLFATHYHELNEMEKNF 759
Query: 677 PKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
P R+K + +SV + I+F+ +L G + S+G+H A +AG+P ++KRA
Sbjct: 760 P---RIKNFNVSVKEVDGK------IIFVRKLEKGGSEHSFGIHVAEIAGMPRSIVKRAN 810
Query: 737 YVL-EAAQNNKHVERWSHENISAQDQ 761
+L E ++N V + DQ
Sbjct: 811 IILKELEKDNSQVGSVGKAAVEHLDQ 836
>gi|423333984|ref|ZP_17311765.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL03T12C09]
gi|409226133|gb|EKN19043.1| DNA mismatch repair protein mutS [Parabacteroides distasonis
CL03T12C09]
Length = 870
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 277/573 (48%), Gaps = 55/573 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + + LK +L + I E ++ R I
Sbjct: 343 QIGDLERIISKV---AVGRVSPREVVQLK--VALRAIEPIKEACMASGEPSLCR-----I 392
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ +C A + + + I+ + G ++ +G +ELD+LR I ++L
Sbjct: 393 GEQLNAC-----ALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDDLRAIAYSGKDYLL 447
Query: 382 EVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+V +EL +P L I + + GY + + D ++ ++
Sbjct: 448 KVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRKQTLVNAER- 499
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E + + KIL +E + +LV + + + N +D
Sbjct: 500 -------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
C LS A A N Y+RP+++ +DI+ GRH + E + + +I ND +D++ + I
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQII 612
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S +++ +S+F
Sbjct: 613 IITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGESTF 672
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++++ +L TS+SL L DE G+GT T DGI + + Y + K L TH
Sbjct: 673 MVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFATH 732
Query: 667 LTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
E LNE + ++ +R+K Y +SV N ++FL +L+PG + S+G+H A +A
Sbjct: 733 YHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHSFGIHVAKMA 783
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G+P ++KR+ +L+ ++ E + + A
Sbjct: 784 GMPKSIVKRSNEILKQLESENRQEGIGGKPVKA 816
>gi|256838304|ref|ZP_05543814.1| DNA mismatch repair protein MutS [Parabacteroides sp. D13]
gi|256739223|gb|EEU52547.1| DNA mismatch repair protein MutS [Parabacteroides sp. D13]
Length = 869
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 278/573 (48%), Gaps = 55/573 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + + LK +L + I E ++ R I
Sbjct: 343 QIGDLERIISKV---AVGRVSPREVVQLK--VALRAIEPIKEACMASGEPSLCR-----I 392
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ +C A + + + I+ + G ++ +G +ELD+LR I ++L
Sbjct: 393 GEQLNAC-----ALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDDLRAIAYSGKDYLL 447
Query: 382 EVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+V +EL +P L I + + GY + + D ++ ++
Sbjct: 448 KVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRKQTLVNAER- 499
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E + + KIL +E + +LV + + + N +D
Sbjct: 500 -------YITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
C LS A A N Y+RP+++ +DI+ GRH + E + + +I ND +D++ + I
Sbjct: 553 CLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQII 612
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S +++ +S+F
Sbjct: 613 IITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGESTF 672
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++++ +L TS+SL L DE G+GT T DGI + + Y + K L TH
Sbjct: 673 MVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFATH 732
Query: 667 LTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
E LNE + ++ +R+K Y +SV N ++FL +L+PG + S+G+H A +A
Sbjct: 733 YHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHSFGIHVAKMA 783
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G+P ++KR+ +L+ ++ E + + + A
Sbjct: 784 GMPKSIVKRSNEILKQLESENRQEGITGKPVKA 816
>gi|418325588|ref|ZP_12936794.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU071]
gi|420185398|ref|ZP_14691490.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM040]
gi|365228190|gb|EHM69375.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU071]
gi|394254384|gb|EJD99353.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM040]
Length = 873
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQRYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|325103878|ref|YP_004273532.1| DNA mismatch repair protein MutS [Pedobacter saltans DSM 12145]
gi|324972726|gb|ADY51710.1| DNA mismatch repair protein MutS [Pedobacter saltans DSM 12145]
Length = 870
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 278/568 (48%), Gaps = 55/568 (9%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++ + MG R+LR W L P+ + + + RL+ +SFF EL +L + ++ +
Sbjct: 288 TLIDVLDHTSSAMGARMLRKWVLMPLKNRKPIEERLDVVSFFFKHNELRETLEQHIRQIG 347
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ ++ K + +++ ++ + K+ E ES++ I E+
Sbjct: 348 DLERLVSKIGLQK--ANPREIVQLKRALRAIEEIKKLCENVDQESVKR--------IAEQ 397
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
C A + E + + + G ++ +GF +ELD+LR+I ++L
Sbjct: 398 INPC-----ASISEKIDKELQADPPVAVAKGKVIADGFNEELDKLRKISYGGKDYL---- 448
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKR 444
LEL + + I + + GY + + D E ++ ++
Sbjct: 449 -LELQRKEAEATGISSLKIAFNNVFGYYLEVSNTHKDKVPTEWIRKQTLVNAER------ 501
Query: 445 LFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSL 504
Y TP+ +E ++ + KI +E + DL++ + F + A+LD L
Sbjct: 502 --YITPELKEYEDQILGAEEKIHALETKLFSDLLASVAEFIRPIQLNATLIAQLDVLLCF 559
Query: 505 ALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGP 560
A +A +N Y+RP+++ + +LDI+ GRH + E + + +I N +D++ +I IITGP
Sbjct: 560 ATIAQKNYYVRPVVSDDKVLDIKGGRHPVIEKNLPIGEEYITNSVYLDDETQQIIIITGP 619
Query: 561 NYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLH 612
N +GKS ++Q LIV ++ +G FVPA A VG+ D S ++++ +S+FM++++
Sbjct: 620 NMAGKSALLRQTGLIVLMAQMGCFVPAKEAHVGIVDKIFTRVGASDNLSSGESTFMVEMN 679
Query: 613 QVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELL 671
+ +L + +SL LLDE G+GT T DGI + + + + K L TH E L
Sbjct: 680 ETASILNNLSDRSLILLDEIGRGTSTYDGISIAWAIVEFLHNHPNANAKTLFATHYHE-L 738
Query: 672 NEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
NE L S R+K + ++V N ++FL +LVPG + S+G+H A +AG+P
Sbjct: 739 NE--LSNSFSRIKNFNVTVKEVGNK------VIFLRKLVPGGSEHSFGIHVAKMAGMPPR 790
Query: 731 VIKRAAYVLEAAQNNKHVERWSHENISA 758
V+ RA +L +N ER E++ A
Sbjct: 791 VLLRANEILRRLEN----ERTGGEHVKA 814
>gi|418411715|ref|ZP_12984981.1| DNA mismatch repair protein mutS [Staphylococcus epidermidis
BVS058A4]
gi|420167653|ref|ZP_14674305.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM087]
gi|394237681|gb|EJD83167.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM087]
gi|410891298|gb|EKS39095.1| DNA mismatch repair protein mutS [Staphylococcus epidermidis
BVS058A4]
Length = 873
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|385813211|ref|YP_005849604.1| DNA mismatch repair protein mutS [Lactobacillus helveticus H10]
gi|323465930|gb|ADX69617.1| DNA mismatch repair protein mutS [Lactobacillus helveticus H10]
Length = 858
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 168/592 (28%), Positives = 281/592 (47%), Gaps = 73/592 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 242 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 293
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 294 PLLNVDIINHREEMVQALLDGYFTRENTIDALKGVYDLERLTGRI--------------- 338
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI---ID 345
+ +VN + +S SL+ +L D + ++ S + T+ A + + G+ I
Sbjct: 339 -----AFGNVNARELLQLSRSLQAVPVIL--DALNQSDSDVLTDFAKKIDPLKGVAELIS 391
Query: 346 VNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
K+ G L+R+G +LD R ++L ++ + E K
Sbjct: 392 TTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDER------QKTGIEN 445
Query: 402 CIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
V +++ GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 446 LKVGFNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLIL 498
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-T 519
+ + D+E + L + + L K N A LD + A VA QNNY RP T
Sbjct: 499 EAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPSFHT 558
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+D+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI
Sbjct: 559 DSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAI 618
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 619 MAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLF 678
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY-TMS 688
DE G+GT T DG+ L G + Y + V K L TH EL + E L + +
Sbjct: 679 DEIGRGTATYDGMALAGAIVKY-LHDKVGAKALFATHYHELTS-----LDETLDYLKNIH 732
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
V E N +VFL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 733 VGATEENGK----LVFLHKILPGPADQSYGIHVAQLAGLPCAVLREATKLLK 780
>gi|385804631|ref|YP_005841031.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi C23]
gi|339730123|emb|CCC41441.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi C23]
Length = 932
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/610 (26%), Positives = 287/610 (47%), Gaps = 65/610 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ L++DATA ++L++F + R G ++ +++ + +GRR L +W RP
Sbjct: 293 DTALRVDATAIQSLELFDS----------RQPYGETLIETIDETSSALGRRTLESWLRRP 342
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D E + +R +A++ + ++ +L E L ++ D+ + + A D + L
Sbjct: 343 LADHEAIKTRHDAVAALAENPLVVETLTEKLSHIYDLERLTARTAREQ--ADARDMRSLL 400
Query: 290 KSICSLLHVNK-----IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+S+ S+ + + E + EQL+ D ++ + I T A + +
Sbjct: 401 QSLDSIPEIKSALIEVLTETELPAETLEQLQA-ELDSLDDIRTLIDT--AVCSDPPQTVT 457
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D G ++ +GF D+LD++R+ E E++ E+ + E + E +
Sbjct: 458 D---------GDVIAKGFNDDLDDIREREEAGREWVSELETRERERTGIDSLE-----VG 503
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + LD E + ++ ++TP + ++ + +
Sbjct: 504 YTEVHGYYIEVTNPNLDHVPNEYTRRQTLKNAER--------FYTPALKRREDEIIAASN 555
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+ +E + D+ + + + L + LD +S A +A + Y+RP +T + L
Sbjct: 556 RADKLEYELFCDIRAEVAAETSRLQAVADAIGRLDALVSFATIAISHAYVRPEITAD-TL 614
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
DI+ GRH + E T F+PN + G I +ITGPN SGKS Y++Q+A I L+ GSF
Sbjct: 615 DIEAGRHPVVEQTQAEFVPNGITFEK-GHIAMITGPNMSGKSTYMRQIAHICILAQAGSF 673
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPADAA + + D S ++ +S+FM ++ ++ +L AT SL LLDE G+GT
Sbjct: 674 VPADAAQIPVLDRIFTRIGASDDISGGESTFMREMSEMTDILHNATESSLILLDEVGRGT 733
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG + T+ F+ ++ + L TH +L G LP + L F P+N+
Sbjct: 734 STTDGRAIARATVE-FIHNEIGARTLFTTHYHDLTTVTGSLPSAFNLHFKVHRETHPDND 792
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
++ + FL+R+ G A SYG+ A LAGVP V+ E AQ H E ++
Sbjct: 793 AS----VTFLHRVTSGAADSSYGVEVAKLAGVPTPVV-------EQAQRYIHTEGENYTE 841
Query: 756 ISAQDQQYKN 765
IS Q + +
Sbjct: 842 ISEQGTHHHD 851
>gi|224116588|ref|XP_002317340.1| predicted protein [Populus trichocarpa]
gi|222860405|gb|EEE97952.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 112/129 (86%)
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
VL+ THLTEL N+GCLP+SE++KF+TMS+LRP+NNSTD++DIVFLYRLVPGHALLSYGLH
Sbjct: 5 VLMSTHLTELFNDGCLPQSEKVKFFTMSLLRPDNNSTDIKDIVFLYRLVPGHALLSYGLH 64
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDL 780
CALLAGVP EVIKRAA++L+ ++ +VER +EN+SAQDQ K V++ML FDV KGD+
Sbjct: 65 CALLAGVPEEVIKRAAFILDTVGSSNYVERLCNENLSAQDQLNKETVDRMLEFDVFKGDI 124
Query: 781 RLFFQDLLP 789
LFFQD+ P
Sbjct: 125 NLFFQDIFP 133
>gi|281422309|ref|ZP_06253308.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
gi|281403630|gb|EFB34310.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
Length = 887
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 271/563 (48%), Gaps = 59/563 (10%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
++G S+ ++++ VT MG R+LR W + P+ D++ +N RL+ + +F E L + L
Sbjct: 298 EDGSSLLNVIDRTVTAMGGRMLRRWLVFPLKDVKPINERLDIVEYFFKEPEFRQLLDDQL 357
Query: 261 KYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
+ D+ I+ K SP + + +K I +V + E L+
Sbjct: 358 HRISDLERIISKVAVGRVSPREVVQLKNALEAIKPI----------KVACQHATNEALKR 407
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+ E+ C T + E I + + G ++ +GF ELD+LR I
Sbjct: 408 VG----EQLNVCETLKDRIARE-----IQPDPPQLVNKGDVIADGFNAELDDLRAISRHG 458
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
++L ++ E+ + + + Y + GY + + D E ++ A +
Sbjct: 459 KDYLLKIQEREIEKTG-----ISSLKVGYNNVFGYYLEVRNTFKDKVPEEWIRKQTLAQA 513
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ Y T + +E + + KIL +E + +L++ + + + N A
Sbjct: 514 ER--------YITQELKEYEEKILGADEKILVLEAQLFNELIAAMQEYIPQIQINANLIA 565
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR 553
+DC LS A + +N Y+RPI+ +LDI+ GRH + E + + ++PND +D + +
Sbjct: 566 RMDCLLSFAKTSDENRYVRPIVDDSEVLDIKQGRHPVIETQLPLGERYVPNDVLLDTEKQ 625
Query: 554 -INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
I +ITGPN +GKS ++Q ALIV L+ +G FVPA++A VGL D S +++ +
Sbjct: 626 QIMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAESARVGLVDKIFTRVGASDNISLGE 685
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLV 663
S+FM+++ + +L + +SL L DE G+GT T DGI + + Y + L
Sbjct: 686 STFMVEMTEAANILNNVSPRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHKKAQARTLF 745
Query: 664 CTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH EL E P R+K + +SV + ++FL +L PG + S+G+H A
Sbjct: 746 ATHYHELNEMEKNFP---RIKNFNVSVREVDGK------VIFLRKLEPGGSEHSFGIHVA 796
Query: 723 LLAGVPAEVIKRAAYVLEAAQNN 745
+AG+P ++ RA +L+ +++
Sbjct: 797 EIAGMPRSIVNRANVILKQLEDD 819
>gi|363899230|ref|ZP_09325740.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|395209621|ref|ZP_10398715.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
gi|361959067|gb|EHL12363.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|394705252|gb|EJF12781.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
Length = 902
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 294/629 (46%), Gaps = 90/629 (14%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D+ + L++++T + G ++ +++ T MG R+LR++ RP+
Sbjct: 267 YMVVDSYSQRNLELWETLREKKKRG--------TLLWVLDYTKTAMGSRMLRHFLERPLR 318
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + + +RL+A+ F M L E L + DI +L + + + A D A S
Sbjct: 319 DKKKIEARLDAVEEFTGHYIDMEELREYLDSIYDIERLLSRISLST--ANARDLLALKLS 376
Query: 292 ICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+ L + K F+ + + E++ L DI K I E +
Sbjct: 377 LQYLPDIKKALSPFQSSLLSKMGEEMDSLE-DIYRKIEEEIVEEPPLSVK---------- 425
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G L++ F ++++ R E+L+E+ + E + K + I Y
Sbjct: 426 -----EGGLIKASFSKDVEDYRNAGVNGKEWLQELEAREREKTG--IKNL---KIKYNRI 475
Query: 409 IGYLMCI---FEEKLDD-----TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
GY + ++ ++ D TL Q GE Y T + EL N +
Sbjct: 476 FGYCFEVSKAYQGEIPDYFIRRQTLAQ------------GER----YITTELEELQNRIL 519
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ D+E A+ L I + K A LD +LSLA +A + NY+RP L+
Sbjct: 520 GAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYLSLAKLAIKENYVRPRLSE 579
Query: 521 EPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
L I+ GRH + E ++ FIPNDT ++ + I IITGPN +GKS Y++QVALIV L
Sbjct: 580 GGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIAIITGPNMAGKSTYMRQVALIVLL 639
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
S IGSFVPA A + + D S + QS+FM+++ +V +LR AT QSL +LD
Sbjct: 640 SAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATKQSLLILD 699
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
E G+GT T DG+ + + Y + + K L TH EL EG L +K Y ++V
Sbjct: 700 EIGRGTSTFDGLSIAWAVVEY-IARHIQAKTLFATHYHELTELEGKL---NNVKNYCIAV 755
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL------EAAQ 743
+ + +I FL +++PG A SYG+ A LAGVP V+ RA + + Q
Sbjct: 756 SKKDG------EISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAFLSDNDFMQ 809
Query: 744 NNKHVERW-----SHENISAQDQQYKNAV 767
NK++ + N+ +QD+Q KN
Sbjct: 810 ENKNIVAKEGGLETDGNLESQDKQAKNGA 838
>gi|417659017|ref|ZP_12308630.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU045]
gi|417910863|ref|ZP_12554579.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU105]
gi|418605405|ref|ZP_13168730.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU041]
gi|418624358|ref|ZP_13187033.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU125]
gi|419770876|ref|ZP_14296938.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-K]
gi|420182965|ref|ZP_14689098.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM049]
gi|420187499|ref|ZP_14693519.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM039]
gi|420197185|ref|ZP_14702909.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM020]
gi|420206384|ref|ZP_14711894.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM008]
gi|420209426|ref|ZP_14714863.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM003]
gi|420214224|ref|ZP_14719503.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05005]
gi|420216056|ref|ZP_14721278.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05001]
gi|420218838|ref|ZP_14723888.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04008]
gi|420221913|ref|ZP_14726838.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH08001]
gi|420224775|ref|ZP_14729613.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH06004]
gi|420227086|ref|ZP_14731859.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05003]
gi|420229409|ref|ZP_14734115.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04003]
gi|420231767|ref|ZP_14736412.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051668]
gi|329736656|gb|EGG72922.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU045]
gi|341655051|gb|EGS78787.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU105]
gi|374402502|gb|EHQ73527.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU041]
gi|374827587|gb|EHR91448.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU125]
gi|383362425|gb|EID39777.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-K]
gi|394249428|gb|EJD94641.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM049]
gi|394255941|gb|EJE00877.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM039]
gi|394265992|gb|EJE10638.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM020]
gi|394278223|gb|EJE22540.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM008]
gi|394278873|gb|EJE23185.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM003]
gi|394283589|gb|EJE27754.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05005]
gi|394289944|gb|EJE33814.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH08001]
gi|394291583|gb|EJE35381.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04008]
gi|394292506|gb|EJE36248.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05001]
gi|394294178|gb|EJE37864.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH06004]
gi|394297587|gb|EJE41184.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05003]
gi|394299175|gb|EJE42726.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04003]
gi|394302309|gb|EJE45757.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051668]
Length = 873
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|198274149|ref|ZP_03206681.1| hypothetical protein BACPLE_00287 [Bacteroides plebeius DSM 17135]
gi|198273227|gb|EDY97496.1| DNA mismatch repair protein MutS [Bacteroides plebeius DSM 17135]
Length = 873
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/630 (27%), Positives = 296/630 (46%), Gaps = 90/630 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFS-VFGMMNKCVTPMGR 219
I S+ + ++F++LD +L++ +G EG + + +++ ++PMG
Sbjct: 255 ITSLSRIEEDRFVRLDKFTVRSLEL-----------VGSMNEGGTCLLDIIDHTISPMGA 303
Query: 220 RLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----S 275
R+L+ W + P+ +++ +N RL+ + FF E + E L + D+ I K S
Sbjct: 304 RMLKRWIVFPLKEIKPINERLDVVEFFFREPEFKEFVEEKLHLIGDLERICSKAAVGRIS 363
Query: 276 PSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNFDIVEKAASCI 329
P + TA +K+ C L+ + +ESLR EQL L I +K A I
Sbjct: 364 PREVVQLKTALQAIEPIKNAC--LNAD-------NESLRRIGEQLNLCA-SIRDKIAKEI 413
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-- 387
+ + VN+ G ++ +G ELDELR+I ++L ++ E
Sbjct: 414 QNDPPLL---------VNK------GGVIADGVNAELDELRKIAYSGKDYLLQIQQRESE 458
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
L +P L I Y + GY + + D E ++ ++ Y
Sbjct: 459 LTGIPSLK-------IAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVNAER--------Y 503
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
T + +E + + KIL +E + +LV + F + A LDC LS A V
Sbjct: 504 ITQELKEYEEKILGAEDKILILETKLYNELVCELAEFIPAIQINATQIARLDCLLSFANV 563
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITGPNYS 563
A N Y+RP + + +LDI+ GRH + E + + +I ND +D + +I IITGPN +
Sbjct: 564 ARANKYIRPNVVDDDVLDIRQGRHPVIEKQLPPGEKYIANDVYLDTEEQQIIIITGPNMA 623
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS ++Q ALI ++ IG FVPA++A +GL D S +++ +S+FM+++++
Sbjct: 624 GKSALLRQTALITLMAQIGCFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAA 683
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEG 674
+L + +SL L DE G+GT T DGI + + + + L TH EL
Sbjct: 684 NILNNISPRSLVLFDELGRGTSTYDGISIAWAIVEHIHEHKKARARTLFATHYHEL--ND 741
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
+ +R+K Y +SV +N ++FL +L G + S+G+H A +AG+P ++KR
Sbjct: 742 MEAQFKRIKNYNVSVKEVDNK------VIFLRKLERGGSAHSFGIHVAKMAGMPKSIVKR 795
Query: 735 AAYVLEAAQNNKHVERWSHENISAQDQQYK 764
A +L + E ISA+ Q K
Sbjct: 796 ADEILHQLEAENR-----QEGISAKGQPSK 820
>gi|357053013|ref|ZP_09114117.1| DNA mismatch repair protein mutS [Clostridium clostridioforme
2_1_49FAA]
gi|355386438|gb|EHG33478.1| DNA mismatch repair protein mutS [Clostridium clostridioforme
2_1_49FAA]
Length = 889
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 178/645 (27%), Positives = 301/645 (46%), Gaps = 76/645 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I +V S +++ +D + L++ +T + G ++ +++K T MG R
Sbjct: 257 ITTVTPYSTGQYMVIDTSTRRNLELVETMREKQKRG--------TLLWVLDKTKTAMGAR 308
Query: 221 LLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR +P++ + + R NA+ ++ EE+ L+ + I I K +P
Sbjct: 309 LLRACIEQPLIHRDEIIRRQNAVEELNMNYISREEICEYLNPIYDLERLIGRISYKTANP 368
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
D AF S+ L ++ +I SE L E R L+ L +
Sbjct: 369 R------DLIAFRSSLEMLPYIKRILGEFNSELLAELGRELD-------------PLQDI 409
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
+ L+ I G ++++G+ E D+LRQ E +L E+ + E +
Sbjct: 410 FRLIGDAIVEEPPITVREGGIIKDGYNQEADKLRQAKTEGKNWLAELEAREKEKTGIKTL 469
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
K F Y ++ F++++ D + + T + T + ++L
Sbjct: 470 KVKFNKVFGYYFEV---TNSFKDQVPDYYIRK-----------QTLTNAERFTTDELKQL 515
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++++ K++ +E + ++ I + K A +D F SL++VA + NY++
Sbjct: 516 EDIIMGAEEKLVSLEYDLFCEVRDKIGAEVIRIQKTAKSIAGIDVFCSLSVVATRRNYVK 575
Query: 516 PILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQV 572
P + + ++ I+NGRH V Q M D F+ NDT +DN R+++ITGPN +GKS Y++QV
Sbjct: 576 PSINDKGVIQIKNGRHPVVEQMMRDDMFVANDTFLDNGKNRLSVITGPNMAGKSTYMRQV 635
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ +GSFVPA A +G+ D S + + QS+FM+++ +V +LR AT
Sbjct: 636 ALIVLMAQLGSFVPAQEADIGICDRVFTRVGASDDLASGQSTFMVEMTEVANILRNATRN 695
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERL 682
SL +LDE G+GT T DG+ + I + + K L TH EL EG + +
Sbjct: 696 SLLVLDEIGRGTSTFDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEGTIAG---V 752
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA + E
Sbjct: 753 KNYCIAV------KEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIARAKEIAEEL 806
Query: 743 QNNKHVERWSH-ENISAQDQQYKNA-------VEKMLAFDVLKGD 779
+ R IS+ Q+K ++++ FD +K D
Sbjct: 807 SDADITARAKEIAEISSNITQHKAVPKPDEVDMQQLSFFDTVKDD 851
>gi|302039393|ref|YP_003799715.1| DNA mismatch repair protein MutS [Candidatus Nitrospira defluvii]
gi|300607457|emb|CBK43790.1| DNA mismatch repair protein MutS [Candidatus Nitrospira defluvii]
Length = 882
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 274/575 (47%), Gaps = 53/575 (9%)
Query: 198 GRAKEG-----FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEEL 252
GRA+E +++ G++++ VT MG RLLR W LRP+++ + RL A+ ++
Sbjct: 297 GRAEESSNQSPYTLLGILDRTVTAMGSRLLREWLLRPLVNSAAIEVRLTAVDELKRQIDI 356
Query: 253 MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLRE 312
L L+ V+DI + + + + D A S+ SL +++
Sbjct: 357 RVRLRTALRIVQDISRLCSRMSL--GVANPRDVLALKISVSSL------------PAIQA 402
Query: 313 QLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+L L+ ++ S +YEL+ G I+ G++++ GF E+DELR+
Sbjct: 403 ELSALDSPLIADLRSSWDNA-QDLYELIEGAIEQEAPVSIRDGSILKSGFHPEVDELRKA 461
Query: 373 YEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
E + +A LE + E I Y GY + + + L + ++
Sbjct: 462 SREGKGW---IAGLEAKERERTGVESLK--IRYNQVFGYYIELTKANLGKVPPDYIRKQT 516
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
++ + T + +EL+ + K+ +E+A+ L + + + L +
Sbjct: 517 LVNAER--------FMTTELKELEERVTGADTKLTALEQALFEQLRTRLATETARLQEIS 568
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVDT-FIPNDTRID- 549
A LD +LA A N Y+RP + L I GRH V++ + + FIPNDT +D
Sbjct: 569 RRLAILDVVAALAETAALNRYVRPTVDEGDGLHILQGRHPVVERLDLSGGFIPNDTHLDL 628
Query: 550 NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
R++I+TGPN +GKS Y++QVALI ++ +GSFVPA A +GLTD S ++
Sbjct: 629 ATSRLHILTGPNMAGKSTYLRQVALITLMAQMGSFVPATEARIGLTDRIFTRVGASDNLA 688
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPK 660
QS+FM+++ + +L AT +SL LLDE G+GT T DG+ + Y + +
Sbjct: 689 GGQSTFMVEMTESAHILNCATPRSLILLDEIGRGTSTYDGLSIAWAIAEYIQDPQRLGAR 748
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH E+ L E + Y ++V + ++FL +++ G A SYG+H
Sbjct: 749 TLFATHYHEMTQLESL--REGITNYCVAVQERDGR------VLFLRKIIRGGADRSYGIH 800
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
A LAG+P +VI RA VL +++ R +N
Sbjct: 801 VAQLAGLPDQVIHRAKAVLAQLESSSSSGRPVQDN 835
>gi|390453602|ref|ZP_10239130.1| DNA mismatch repair protein mutS [Paenibacillus peoriae KCTC 3763]
Length = 942
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 287/588 (48%), Gaps = 69/588 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD L++ +T + R+K+G S+ ++++ T MG RLLR W +P
Sbjct: 254 NHFMILDPFTRRNLELVETVRE-------RSKKG-SLLWLLDRTETSMGARLLRRWIDKP 305
Query: 230 ILDLENLNSRLNAISF----FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+L+ + RL A+ F+ E++ A L E + D+ ++ + S A D
Sbjct: 306 LLNSHMIEERLEAVDKLYHQFIFREDVRAQLKE----IYDLERLVGRIAFGS--ANARDL 359
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYELVIGI 343
A S+ + + ++ S++LR + L+ D+ C E A E I +
Sbjct: 360 IALKLSLARVPALRELCAESPSQTLRRIAQTLDSCTDL------CALIEEAVADEPPISV 413
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G L++EG+ LDELR+ ++ E+ + E + I
Sbjct: 414 RD---------GGLIKEGYHQRLDELREASVNGKRWIAELEAKE-----RAATGIRSLKI 459
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + ++ + L L + +R Y TP+ +E ++L+ +
Sbjct: 460 GYNKVFGYYI-----EVTKSNLSSLPEGRYERKQTLANAER--YITPELKEKESLILEAE 512
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K++D+E + +L S + + L K AE+D + S+A V+ + +++P LT
Sbjct: 513 DKMVDLEYTLFSELRSKLNVEIPRLQKLAEQVAEIDVYQSMASVSAERGFVKPELTTGYD 572
Query: 524 LDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSH 580
I+ GRH + E M +FI N T ++ D I +ITGPN +GKS Y++QVALI ++
Sbjct: 573 FVIEQGRHPVVEAVMKDGSFIANGTALEEADAHILLITGPNMAGKSTYMRQVALIAIMAQ 632
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPA A V + D + + QS+FM+++ + +M +AT +SL ++DE
Sbjct: 633 IGCFVPAARAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDEL 692
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
G+GT T +G+ + I FV + K LV TH EL + E LP L+ Y+M+V
Sbjct: 693 GRGTSTSEGMAIAQAVIE-FVHDIIGCKALVSTHFHELAHLEQSLPS---LRNYSMAV-- 746
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
S D + FL +L+ G A SYG++CA LAG+P+ +I+RA +L
Sbjct: 747 --QESGD--KVNFLRKLIQGAASSSYGIYCARLAGLPSNIIERANGLL 790
>gi|403514450|ref|YP_006655270.1| DNA mismatch repair protein MutS [Lactobacillus helveticus R0052]
gi|403079888|gb|AFR21466.1| DNA mismatch repair protein MutS [Lactobacillus helveticus R0052]
Length = 865
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 168/592 (28%), Positives = 281/592 (47%), Gaps = 73/592 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 249 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 301 PLLNVDIINHREEMVQALLDGYFTRENTIDALKGVYDLERLTGRI--------------- 345
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI---ID 345
+ +VN + +S SL+ +L D + ++ S + T+ A + + G+ I
Sbjct: 346 -----AFGNVNARELLQLSRSLQAVPVIL--DALNQSDSDVLTDFAKKIDPLKGVAELIS 398
Query: 346 VNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVP 401
K+ G L+R+G +LD R ++L ++ + E K
Sbjct: 399 TTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDER------QKTGIEN 452
Query: 402 CIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
V +++ GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 453 LKVGFNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLIL 505
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-T 519
+ + D+E + L + + L K N A LD + A VA QNNY RP T
Sbjct: 506 EAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPSFHT 565
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+D+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI
Sbjct: 566 DSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAI 625
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 626 MAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLF 685
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY-TMS 688
DE G+GT T DG+ L G + Y + V K L TH EL + E L + +
Sbjct: 686 DEIGRGTATYDGMALAGAIVKY-LHDKVGAKALFATHYHELTS-----LDETLDYLKNIH 739
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
V E N +VFL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 740 VGATEENGK----LVFLHKILPGPADQSYGIHVAQLAGLPCAVLREATKLLK 787
>gi|428216182|ref|YP_007089326.1| DNA mismatch repair protein MutS [Oscillatoria acuminata PCC 6304]
gi|428004563|gb|AFY85406.1| DNA mismatch repair protein MutS [Oscillatoria acuminata PCC 6304]
Length = 887
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 183/686 (26%), Positives = 301/686 (43%), Gaps = 87/686 (12%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
L S+ +G E + VRA+GGLL LE QKE+ I + V +L +L
Sbjct: 259 LRSLEGVGCENLPLAVRAAGGLLEYLE-------ATQKEN---RIPLQLVKSYTLADYLI 308
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
+DA L+I QT + + G S+ +++ T MG R LR W L+P+L ++
Sbjct: 309 VDAQTRRNLEITQTVRDGTFYG--------SLLWAIDRTKTAMGGRALRRWILQPLLKIK 360
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ SR + + + EL + L + DI + + S + A D A S+
Sbjct: 361 GIRSRQDTVEELVQKTELREEIQTLLSEIYDIERLTVRAGSGTA--NARDLLALADSLAK 418
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L ++ + + G S L K + +EL + V I +
Sbjct: 419 LPELSALAQQGNSPYL-------------KPLQQVPSELEALAGRVKRAIVESPPLHLSD 465
Query: 355 GTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
G L+R +ELDE+R + E ++L EV E + +L + Y GY
Sbjct: 466 GGLIRPNMYEELDEMRSLVEGDQQWLANLEVQERERTGISNLK-------VGYNKTFGYY 518
Query: 413 MCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
+ I K + + ++ T Y TP+ +E ++ + + +E
Sbjct: 519 ISILRSKSEQAPADYVRRQTL--------TNEERYITPELKERESRILTAQEDLNKLEYE 570
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHV 532
I L S + ++ + A +D A +A Y RP + L I NGRH
Sbjct: 571 IFVQLRSQVGEYAAMIRNVAKAVAAIDVLCGFAEIAIDRGYCRPEMVENRELRITNGRHP 630
Query: 533 LQEMTVDT--FIPNDTRIDN---------DGRIN----IITGPNYSGKSIYIKQVALIVF 577
+ E ++ F+PN TR+ N D R+ I+TGPN SGKS Y++QV LI
Sbjct: 631 VVEYSIPAGLFVPNSTRLGNAEDPGKSESDHRLAPDLIILTGPNASGKSCYLRQVGLIQL 690
Query: 578 LSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ GSF+PA +AT+G+ D + QS+FM+++++ +L A+ +SL LL
Sbjct: 691 LAQTGSFIPATSATLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHASPKSLVLL 750
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ + Y T ++ + + TH E +NE L +V
Sbjct: 751 DEIGRGTATFDGLSIAWSVAEYLAT-EIRSRTIFATHYHE-MNE--------LASILFNV 800
Query: 690 LRPENNSTDVED-IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ ++ D IVFL+++ PG A SYG+ LAG+P+ VI+RA V+ + + +
Sbjct: 801 ANYQVTVRELADEIVFLHQVQPGGADRSYGIEAGRLAGLPSVVIQRAKEVMSQIEKHSKI 860
Query: 749 ERWSHENISAQDQQYKNAVEKMLAFD 774
+ ++ E++ FD
Sbjct: 861 AVGLRKGAKKEEVNSSETTEQLDMFD 886
>gi|410465974|ref|ZP_11319130.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981004|gb|EKO37642.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 887
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 181/613 (29%), Positives = 280/613 (45%), Gaps = 77/613 (12%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
V+L + + LD L+IF+ GR G +++ ++++ TPMG RLL
Sbjct: 264 VNLGRHMLLDEVTERNLEIFRRLD-------GRKGRG-TLWHVLDRTQTPMGGRLLETML 315
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA--SD 284
+P LDL ++ A++ F+ E L + E L V D+ ++ + F+ A D
Sbjct: 316 RQPWLDLGPIHETQEAVALFVEDESLRRLVREDLAGVYDLERLITRI----FLGRAVPRD 371
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+TA +S+ +L G+ E L + + + ++
Sbjct: 372 FTALRQSLAAL--------PGLRERLSGAASAKAASALLSGWDDLDDLFELLSRSLVDSP 423
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCKEMFVPC 402
V ++ G L R G+ ELDEL + E + L+E+ + E LP L K F
Sbjct: 424 PVLVTE----GGLFRAGYHPELDELLDLAEHGEQKLQELLAREQEAGNLPKL-KLGFNRV 478
Query: 403 IVYIHQI----GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
Y ++ GY FE + E+ Y TP +EL++
Sbjct: 479 FGYYFELSKSAGYAPAHFERRQTLANCER-------------------YVTPALKELEDK 519
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
L K +E + R+L H+ + +++ A LD + LA A ++ RP L
Sbjct: 520 LLASGEKRKTLEYNLFRELRDHVAGLRERVMETAARVARLDVWQGLAEAAVAGDWTRPEL 579
Query: 519 TLEPLLDIQNGRHVLQEMT--VDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ I+ GRH + E V +IPND +D R+ +ITGPN +GKS ++Q ALI
Sbjct: 580 HAGQAIAIRGGRHPVVEAVTGVGNYIPNDVSLDESTRMLLITGPNMAGKSTVLRQTALIA 639
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
L+ IGSFVPA A+VGL D S ++ QS+FM+++ + +LRQA +SL +
Sbjct: 640 ILAQIGSFVPAARASVGLVDRVFCRVGASDNLAQGQSTFMVEMMETARILRQAGKKSLVI 699
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV--LVCTHLTELLN-EGCLPKSERLKFY 685
LDE G+GT T DG+ L + D V L TH EL EG +P L+
Sbjct: 700 LDEIGRGTATFDGLALAWAVVEELCGRDDGHGVRTLFATHYHELTALEGRIPG---LRNA 756
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV---LEAA 742
++V + DI+FL RL+PG A SYG+ A LAGVP V+KRA + LE+
Sbjct: 757 NIAVKEWKG------DIIFLRRLLPGPADRSYGVEVAKLAGVPRNVVKRAREILGELESC 810
Query: 743 QNNKHVERWSHEN 755
++ V R + E
Sbjct: 811 RDPGQVARGNRER 823
>gi|358063956|ref|ZP_09150552.1| DNA mismatch repair protein mutS [Clostridium hathewayi WAL-18680]
gi|356697825|gb|EHI59389.1| DNA mismatch repair protein mutS [Clostridium hathewayi WAL-18680]
Length = 883
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 170/601 (28%), Positives = 286/601 (47%), Gaps = 74/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +F+ +D + L++ +T + G ++ +++K T MG R
Sbjct: 255 ITTISPYTTGEFMIIDLSTRRNLELVETMREKQKRG--------TLLWVLDKTKTAMGAR 306
Query: 221 LLRNWFLRPILDLENLNSRLNAI----SFFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR + +P++ + R A+ + ++ EE+ L+ + I I K +P
Sbjct: 307 LLRTYIEQPLVHKAQILERQEAVEELNNSYINREEICEYLNPIYDLERLIGRISYKTANP 366
Query: 277 SFIYTASDWTAFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTEL 333
D AF S+ L H+ + F + L E+L D +E
Sbjct: 367 R------DLIAFRNSLEMLPHIKNLLGEFRSPLLGRLYEEL-----DTLED--------- 406
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP- 392
VY+L+ I+ G ++++G+ +E D LR E +L E+ + E +
Sbjct: 407 --VYDLIFRSIEEEPPITVRDGGIIKDGYSEEADRLRHAKTEGKTWLAELEAKEREKTGI 464
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
K F Y ++ F+E + D F +R Y T +
Sbjct: 465 KGLKIKFNKVFGYYFEV---TNSFKEMVPDY---------FIRKQTLANAER--YTTSEL 510
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+EL+ ++ K+ +E ++ ++ I + KA A +D F SL++VA +NN
Sbjct: 511 KELEEIIMGAEDKLFSLEYSLFCEIRDSIGAEVLRIQKAAKAIAGIDVFASLSVVATRNN 570
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDND-GRINIITGPNYSGKSIYI 569
Y++P + + + I+NGRH + E+ + D F+ NDT +DN R++IITGPN +GKS Y+
Sbjct: 571 YVKPSINEKGEIHIKNGRHPVVELMLREDLFVANDTLLDNQKNRVSIITGPNMAGKSTYM 630
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALIV ++ +GSFVPAD A +GL D S + + QS+FM+++ +V +LR A
Sbjct: 631 RQTALIVLMAQLGSFVPADEADIGLCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNA 690
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKS 679
T SL +LDE G+GT T DG+ + + + + K L TH EL EG +
Sbjct: 691 TKDSLIILDEIGRGTSTFDGLSIAWAVVEHISNTKILGAKTLFATHYHELTELEGTMSG- 749
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ Y ++V +DIVFL +++ G A SYG+ A LAGVP VI+RA ++
Sbjct: 750 --VTNYCIAV------KEQGDDIVFLRKIIKGGADKSYGIQVAKLAGVPDTVIERAKELV 801
Query: 740 E 740
E
Sbjct: 802 E 802
>gi|363893649|ref|ZP_09320744.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium ACC19a]
gi|361963451|gb|EHL16523.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium ACC19a]
Length = 851
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/587 (27%), Positives = 290/587 (49%), Gaps = 74/587 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R +++F ++NK T MG RLL+ + L+P+ D + RLN +S F+ + +
Sbjct: 272 RKNNSYTLFWVLNKANTSMGSRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSH 331
Query: 259 TLKYVKDIPHILKKFNSPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L+ V D+ I S +Y + D KS+ ++ + IF+ G ++S E+L
Sbjct: 332 ILREVYDLERI-----SNRIVYDTVSHRDLLNLKKSLKAVNEIKNIFK-GENDSRFEEL- 384
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIID-VNRSKEKGYGTLVREGFCDELDELRQIYE 374
++++ K +L + L+ I+ + +K + +++ + ++L R + E
Sbjct: 385 ---YEVLSK------NDLMPIINLIENSIEEIGEDFKKEH--IIKSSYDEKLAHYRDLLE 433
Query: 375 ELPEFL--EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
L E E + +L I Y GY + I T LQ F
Sbjct: 434 NTSNILIKMERDEREKTGIKNLK-------ISYNKVFGYYIEI--------TKAALQNF- 477
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL-------DMERAITRDLVSHICLFS 485
+M + +R R ++N L I ++L +E A+ +++ + F
Sbjct: 478 ----NMPSDYERRQTLVSSERFINNNLKKIEEEMLTARQGESQLESALYKEVKEELKNFI 533
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIP 543
+++ +++D + +LA A +N+Y++P+++++ + I+NGRH + E + + ++P
Sbjct: 534 PKIMQVAEMISQIDVYTALAKTAIENDYVKPMISIDGNIVIKNGRHPVIEKLLPNEDYVP 593
Query: 544 NDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH---- 599
NDT + +IITGPN +GKS Y++QVA+I+ ++HIGS+VPA A + + DS +
Sbjct: 594 NDTDL-TKSETHIITGPNMAGKSTYMRQVAIIMLMAHIGSYVPASFAQIPIIDSIYTRIG 652
Query: 600 ----MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
++ QS+FM+++ +V +L+ AT SL +LDE G+GT T DG+ L + Y C
Sbjct: 653 ASDDLSMGQSTFMVEMTEVSNILKNATQNSLIILDEIGRGTSTYDGMSLAFSIVEYI--C 710
Query: 656 D-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
+ + K LV TH EL K + +K Y M V D ++I FL ++V G A
Sbjct: 711 EHIKAKTLVSTHYHELT--ALESKYKNIKNYCMLV-------DDSKEIKFLRKIVLGKAD 761
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
SYG+H A LA +P EV++RA +L + ++ + S QDQ
Sbjct: 762 KSYGIHVAQLADLPYEVLERANIILSKLETSEKKSSKKYNQKSEQDQ 808
>gi|116618670|ref|YP_819041.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122271130|sp|Q03VV4.1|MUTS_LEUMM RecName: Full=DNA mismatch repair protein MutS
gi|116097517|gb|ABJ62668.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 854
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 266/559 (47%), Gaps = 52/559 (9%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
K+ S+ G++++ T MG RLL+ W LRP+ D E++N RL+ I F + +L + L
Sbjct: 276 KKAGSLLGLIDETKTAMGGRLLKQWLLRPLRDTEDINERLDVIEAFQNEFFVRGALQDHL 335
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K V D+ + + + A + +S+ ++ G+ L +LN
Sbjct: 336 KSVYDLERLAAR--AAMGTMNARELVQLKRSLSAI--------PGMKSVLSSSQGILNH- 384
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
AS +++ + L+ I + G ++ +GF ++DE R + + ++L
Sbjct: 385 -----ASQRLEDMSDLAGLIDEAIVDDPPISIREGDIINDGFDSKIDEYRNVLSQNQKWL 439
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE---EKLDDTTLEQLQGFEFAFSD 437
++ S E + + Y G+ + + KL++ E+ Q
Sbjct: 440 AQLESDE-----RAATGINSLKVKYNKNFGFFIEVSRANVSKLEEGRYERKQTL------ 488
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
T + TP+ +E + L+ + K + E + + + L K A+
Sbjct: 489 ----TNAERFVTPELKEHERLINEAQLKRTEREYELFITIRERVKANISRLQKLARQVAQ 544
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRIN 555
LD SLA VA N ++RP T + +++I+ GRH + E ++ F+ ND +D + +
Sbjct: 545 LDVLASLADVADNNRFVRPTFTDDNIINIKQGRHPVVEAILEAGEFVANDVNLDQNTAMQ 604
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN +GKS Y++++ALIV L +GSFVPA++A + + D + M QS+F
Sbjct: 605 LITGPNMAGKSTYMRELALIVILGQMGSFVPAESAVLPIFDQIFTRIGANDDMAMGQSTF 664
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++ + + L++A++ SL L DE G+GT T DG+ L I Y V K L TH
Sbjct: 665 MVEMAEANLALQEASAHSLILFDELGRGTATYDGMALAQAIIEYL-DAHVHAKTLFSTHY 723
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL K E +K + + E+ ++ FL+++ G A SYG+H A LAG+
Sbjct: 724 HELT--ALADKHENIKNVHVGAVEDESG-----ELHFLHQIQQGPADKSYGIHVAALAGL 776
Query: 728 PAEVIKRAAYVLEAAQNNK 746
P E+I A +L +N +
Sbjct: 777 PDELIANATTILSGLENQE 795
>gi|428201805|ref|YP_007080394.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
gi|427979237|gb|AFY76837.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
Length = 892
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 172/656 (26%), Positives = 294/656 (44%), Gaps = 83/656 (12%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
+ S+ +G E + +RA+GGLL +E+ + + + + + S+ +L
Sbjct: 259 IRSLEGLGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLRTYSIADYLI 308
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD L+I QT + S G S+ +++ T MG R LR W L+P+LD +
Sbjct: 309 LDYQTRRNLEITQTVRDNSFHG--------SLLWALDRTCTAMGGRALRRWLLQPLLDPK 360
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ +R + I + + L L + L+ + D+ I + S + A D A S+
Sbjct: 361 GIRARQDTIQELVENTSLRQDLRQLLRNIYDLERITGRVGSGTA--NARDLLALADSLVR 418
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + ++ S L KA + +L + + VI + +
Sbjct: 419 LNDLAELASYSTSPYL-------------KALQRVPPKLEQLGQKVIAHLVESPPLHLKE 465
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
G ++R+G +LDE+R++ +E E++ + + E + ++ + Y GY +
Sbjct: 466 GGVIRDGVNPQLDEMRRLAKEDYEWITNLEATEKQR-----TGIYNLKVGYNKTFGYYIS 520
Query: 415 IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+ K + + ++ T Y TP+ +E + + + +E I
Sbjct: 521 LPRSKAEKAPDDYIRKQTL--------TNEERYITPELKERETRILTAKDDLNKLEYEIF 572
Query: 475 RDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--V 532
DL S + + + A +D LA VA Y RP + ++I +GRH V
Sbjct: 573 ADLRSQVAQKAQEIRSIAKAVAAIDVLAGLAEVAVYQGYCRPEIEQGRQIEILDGRHPVV 632
Query: 533 LQEMTVDTFIPNDTRIDNDGRIN-------------IITGPNYSGKSIYIKQVALIVFLS 579
Q + V F+PN T++ +I I+TGPN SGKS Y++QV LI ++
Sbjct: 633 EQSLPVGLFVPNSTQMGRRDKIKNGEDSALSHPDLIILTGPNASGKSCYLRQVGLIQLMA 692
Query: 580 HIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDE 631
+GSFVPA +A +G+ D + QS+FM+++++ +L AT +SL LLDE
Sbjct: 693 QMGSFVPAKSAKLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATPKSLVLLDE 752
Query: 632 FGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLR 691
G+GT T DG+ + Y T ++ K + TH EL L + + Y ++V
Sbjct: 753 IGRGTATFDGLSIAWAVAEYLAT-EIQAKTIFATHYHELNELASLISN--VANYQVTVKE 809
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
N +I+FL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 810 MPN------EIIFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAKQVMR--QIEKH 857
>gi|401626462|gb|EJS44408.1| msh5p [Saccharomyces arboricola H-6]
Length = 904
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 181/618 (29%), Positives = 281/618 (45%), Gaps = 85/618 (13%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEG-FSVFGMMNKCVTPMGRRLLRNWFLRPILDL 233
LD AL IF H + K G SVF + N + RR+L++W P+
Sbjct: 252 LDENTVSALNIFPAVHELGHDNM--MKNGSLSVFELFNLVSSDYARRMLKSWLFNPLTSK 309
Query: 234 ENLNSRLNAISFFLCSEE--LMASLHETLKYVKDIPHILKKFNSP-SFIYTASDWTAFLK 290
+ R I L + + L + +K D + + S S + T S FL+
Sbjct: 310 RQIEKRYYIIRILLERQNTIIFEDLSQAIKKCPDAFGFINQLRSGRSTLGTWSKIVKFLE 369
Query: 291 SICSLLHVNKIFEVGI-SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
++ + + E+L ++++ N DI + L + +ID + S
Sbjct: 370 KGIAIFRIISSLRLNSEDENLFQEIKN-NVDI---------SVLKQCLRNIETVIDFDTS 419
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA----SLELVQLPH----LCKEM-FV 400
++ T V G LDE R IY L L +VA + L LP + K++ +
Sbjct: 420 RDTKAVT-VNTGVDRRLDECRNIYNHLEGILLDVAREAQTFLLDALPQNVSGITKDLDKL 478
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET-----KRLFYHTPKTREL 455
VYI Q+GYL+ T ++ + D++ E + +++ + EL
Sbjct: 479 INAVYIPQLGYLV---------TVSTSMEAYLNNIPDLEWEEIFRSPENVYFKNSRVFEL 529
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA------ELDCFLSLALVAH 509
D GDIY I D E + L + L K F A EL+ +S A V+
Sbjct: 530 DETYGDIYGAISDFEIELLFSLQEQV------LEKRAQFTAYSILLSELEILVSFAQVSA 583
Query: 510 QNNYMRP-ILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID------------NDGRINI 556
Q NY P ++ + +L+I NGRH L E + +IPN T ID N R+ I
Sbjct: 584 QRNYTEPQLVENDCVLEIINGRHALYETFLSDYIPNSTMIDGGLFTDSSWCKHNKERVII 643
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAE-----QSSFM 608
ITG N SGKS+Y+ Q LIV+L+ IG FVPA+ A +G+ D ++ T E QSSF+
Sbjct: 644 ITGANASGKSVYLTQNGLIVYLAQIGCFVPAERAKIGIVDKILTRIRTQETIYKTQSSFI 703
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLT 668
+D Q+ L AT +SL L+DE+GKGT DG L G + + P++L CTH
Sbjct: 704 LDSQQMAKSLTLATERSLILIDEYGKGTDILDGPSLFGSIMLNMSKTERCPRILACTHFH 763
Query: 669 ELLNEGCLPKS-ERLKFYTMSVLRPENN----------STDVEDIVFLYRLVPGHALLSY 717
EL NE L + + +K Y +L +N+ + + E I FL+R+ G + S+
Sbjct: 764 ELFNENILTEQIQGIKHYCTDILINQNHNILGTTQAKENNENEGITFLFRIKEGISKQSF 823
Query: 718 GLHCALLAGVPAEVIKRA 735
G++CA + G+ +++RA
Sbjct: 824 GIYCAKICGLKKNIVERA 841
>gi|291534090|emb|CBL07203.1| DNA mismatch repair protein MutS [Megamonas hypermegale ART12/1]
Length = 810
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/555 (28%), Positives = 270/555 (48%), Gaps = 57/555 (10%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
+++ +++ T MG RLLR W P+L + +N RL+A++ + L +L E LK +
Sbjct: 279 TLYDVLDFTKTAMGSRLLRKWLEYPLLSPKKINDRLDAVANLVSDFSLRNNLREQLKEIY 338
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D +L + + A D A S+ L I +SL + L +I +
Sbjct: 339 DFERLLTRMEVGTA--NARDMNALKSSLYVL--------PAIKKSLAKATAKLLVNIHQN 388
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFL 380
++ Y+ ++ +ID ++ + G +++G+ ELDE R I + L
Sbjct: 389 IST---------YDDLVVLIDKAIVEDPSFSIREGGFIKDGYNQELDEYRNIAKNSKRLL 439
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+++ E + K + I Y GY + + + ++ A ++
Sbjct: 440 QQMEEDEKNKTG--IKSL---KIGYNKVFGYYIEVRHSSTEMVPENYIRKQTLANAER-- 492
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y TP+ +E + + KI+ +E + +L + + + A LD
Sbjct: 493 ------YITPELKEFETKILGAQEKIVQLEYNLFTELRDILKTKISSIQNTAHEIAILDV 546
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINII 557
+SLA + NY+RP L + + I++GRH L E + D F+PNDT +DN I II
Sbjct: 547 LVSLAQAGDEYNYIRPKLLDDGTIHIKDGRHPLVERILNRDLFVPNDTHLDNAQNEIMII 606
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS Y++Q AL+ ++ +GSF+PA A++ D S + + QS+FM+
Sbjct: 607 TGPNMAGKSTYMRQSALLTLMTQVGSFIPAREASISPVDKIFTRIGASDDLVSGQSTFMV 666
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTE 669
++++V +L+ AT++SL +LDE G+GT T DG+ + I + + + K L TH E
Sbjct: 667 EMNEVSHILKYATNKSLVILDEIGRGTSTYDGMSIARAVIEH-IRDHIGAKTLFATHYHE 725
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L + L +K Y ++V E S D+ FL R++ G A SYG+H A LAG+P
Sbjct: 726 LTD---LEDDVHVKNYCIAV--KEKGS----DVTFLRRIIRGSADKSYGIHVAKLAGLPQ 776
Query: 730 EVIKRAAYVLEAAQN 744
EV+KRA +L +N
Sbjct: 777 EVVKRAETILIDLEN 791
>gi|308069371|ref|YP_003870976.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa E681]
gi|305858650|gb|ADM70438.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa E681]
Length = 981
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 284/588 (48%), Gaps = 69/588 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD L++ +T + R+K+G S+ ++++ T MG RLLR W +P
Sbjct: 296 NHFMILDPFTRRNLELVETVRE-------RSKKG-SLLWLLDRTETSMGARLLRRWIDKP 347
Query: 230 ILDLENLNSRLNAISF----FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+L + RL A+ F+ E++ A L E + D+ ++ + S A D
Sbjct: 348 LLSSSLIEERLEAVDKLYHQFIFREDVRAQLKE----IYDLERLVGRIAFGS--ANARDL 401
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYELVIGI 343
A S+ + + ++ S++LR + L+ D+ C E A E I +
Sbjct: 402 IALKLSLARIPSLRELCAESPSKTLRRIAQTLDSCTDL------CALIEEAVADEPPISV 455
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G L++EG+ LDELR+ ++ E+ + E + I
Sbjct: 456 RD---------GGLIKEGYHQRLDELREASVNGKRWIAELEAKE-----RAATGIRSLKI 501
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + ++ + L L + +R Y TP+ +E ++L+ +
Sbjct: 502 GYNKVFGYYI-----EVTKSNLASLPEGRYERKQTLANAER--YITPELKEKESLILEAE 554
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K++D+E + +L S + L K AE+D + SLA V+ + +++P LT
Sbjct: 555 DKMVDLEYTLFSELRSKLNAEIPRLQKLAEQVAEIDVYQSLASVSSERGFVKPELTTGYD 614
Query: 524 LDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
++ GRH + E M FI N T ++ D I +ITGPN +GKS Y++QVALI ++
Sbjct: 615 FVVEQGRHPVVEAVMKDGGFIANSTVLEETDAHILLITGPNMAGKSTYMRQVALIAIMAQ 674
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPA A V + D + + QS+FM+++ + +M +AT +SL ++DE
Sbjct: 675 IGCFVPAARAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDEL 734
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
G+GT T +G+ + I FV + K LV TH EL + E LP L+ Y+M+V
Sbjct: 735 GRGTSTSEGMAIAQAVIE-FVHDTIGCKALVSTHFHELAHLEQGLPS---LRNYSMAV-- 788
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
S D + FL +L+PG A SYG++CA LAG+P +I+RA +L
Sbjct: 789 --QESGD--KVNFLRKLIPGAASSSYGIYCARLAGLPNNIIERANGLL 832
>gi|410723797|ref|ZP_11363019.1| DNA mismatch repair protein MutS [Clostridium sp. Maddingley
MBC34-26]
gi|410602799|gb|EKQ57256.1| DNA mismatch repair protein MutS [Clostridium sp. Maddingley
MBC34-26]
Length = 923
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 285/582 (48%), Gaps = 59/582 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + S G S+ +++K T MG R +R W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKSKKG--------SLLWVLDKSATSMGGRTIRKWIEEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ RLN ++ S L L +LK + DI I+ K ++ + A D + S
Sbjct: 310 IKSEIIKRLNGVNEIFSSISLNEDLRNSLKDIYDIERIVGKISNKNV--NAKDLLSLKAS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + + + + S+ L+E L+ ELA + L+ I + S
Sbjct: 368 LDKIPAIKGLLKNTNSDLLKEYYESLD-------------ELADIRNLLELSIKEDPSLS 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ E+DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 IKEGNIIKDGYNAEVDELRQSKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYSSIPEGRYVRKQTLANAERYITEELKVME-DKILG-AEEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ ++ I L K+ + LD +LAL+A +N+Y++P + + L++I GR
Sbjct: 522 YTLFSEIRDKIENEITRLKKSARIISNLDGISTLALIALENDYVKPEINEDGLIEIAEGR 581
Query: 531 HVLQEMTVD--TFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ +D + +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 582 HPVVEKVIGRGEFVSNNTILNQSDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS+SL LLDE G+GT T
Sbjct: 642 ASANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y ++ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITGNENLRCKTLFATHYHELVKLEGVLPG---VKNYSVAVKKMKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++FL ++V G A SYG+ A LAG+P VI RA +L
Sbjct: 757 ----VIFLRKIVEGGADESYGIEVAKLAGLPEGVINRAKEIL 794
>gi|381337048|ref|YP_005174823.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356645014|gb|AET30857.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 854
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 267/559 (47%), Gaps = 52/559 (9%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
K+ S+ G++++ T MG RLL+ W LRP+ D E++N RL+ I F + +L + L
Sbjct: 276 KKAGSLLGLIDETKTAMGGRLLKQWLLRPLRDTEDINERLDMIEAFQNEFFVRGALQDHL 335
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K V D+ + + + A + +S+ ++ G+ L +LN
Sbjct: 336 KSVYDLERLAAR--AAMGTMNARELVQLKRSLSAI--------PGMKSVLSSSQGILNH- 384
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
AS +++ + L+ I + G ++ +GF ++DE R + + ++L
Sbjct: 385 -----ASQRLEDMSDLAGLIDEAIVDDPPISIREGDIINDGFDSKIDEYRNVLSQNQKWL 439
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE---EKLDDTTLEQLQGFEFAFSD 437
++ S E + + Y G+ + + KL++ E+ Q
Sbjct: 440 AQLESDE-----RAATGINSLKVKYNKNFGFFIEVSRANVSKLEEGRYERKQTL------ 488
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
T + TP+ +E + L+ + K + E + + + L K A+
Sbjct: 489 ----TNAERFVTPELKEHERLINEAQLKRTEREYELFITIRERVKANISRLQKLARQVAQ 544
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRIN 555
LD SLA VA N ++RP T + +++I+ GRH + E ++ F+ ND +D + +
Sbjct: 545 LDVLASLADVADNNRFVRPTFTDDNIINIKQGRHPVVEAILEAGEFVANDVNLDQNTAMQ 604
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN +GKS Y++++ALIV L +GSFVPA++A + + D + M QS+F
Sbjct: 605 LITGPNMAGKSTYMRELALIVILGQMGSFVPAESAVLPIFDQIFTRIGANDDMAMGQSTF 664
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++ + + L++A++ SL L DE G+GT T DG+ L I Y + V K L TH
Sbjct: 665 MVEMAEANLALQEASAHSLILFDELGRGTATYDGMALAQAIIEY-LDAHVHAKTLFSTHY 723
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL K E +K + + E+ ++ FL+++ G A SYG+H A LAG+
Sbjct: 724 HELT--ALADKHENIKNVHVGAVEDESG-----ELHFLHQIQQGPADKSYGIHVAALAGL 776
Query: 728 PAEVIKRAAYVLEAAQNNK 746
P E+I A +L +N +
Sbjct: 777 PDELIANATTILSGLENQE 795
>gi|114566506|ref|YP_753660.1| DNA mismatch repair protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318429|sp|Q0AYB5.1|MUTS_SYNWW RecName: Full=DNA mismatch repair protein MutS
gi|114337441|gb|ABI68289.1| DNA mismatch repair protein MutS [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 859
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 188/683 (27%), Positives = 315/683 (46%), Gaps = 85/683 (12%)
Query: 89 SYEQAWHRLIYLRVTGMDD-GLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVD 147
S+E+ W R + +T D+ LS++ L + + S + RI+
Sbjct: 186 SWEEEWLRQQNITLTVWDELPLSLERAESLLLRQLQVASLESFGLKSYSAGIKAAARIIA 245
Query: 148 TLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVF 207
LE+ + + I S+ S + FL++D + L++ T + G S+
Sbjct: 246 FLEETQKTSLQ-HIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREG--------SLL 296
Query: 208 GMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIP 267
++++ T MG+RLLR W +P+ + + RL+A+ + L L L + D+
Sbjct: 297 SILDESRTAMGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLE 356
Query: 268 HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAAS 327
+ K + + + D S+ + + K + SE L+ RL D +E+ +
Sbjct: 357 RLGGKIGAS--VASPRDLLGLKSSLAVINDIKKALQPCRSEILQ---RLAAMDALEEVFA 411
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
I + E +GI + G L++ G+ E+DELR++ +E +L E + E
Sbjct: 412 LIDASIND--EAPLGIKE---------GELIKTGYKQEIDELRELSQEGSNWLVEFENRE 460
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
+ K + V + GY + I + L A +D Y
Sbjct: 461 KQRTG--IKNLKVG---FNKVFGYYIEITKSNLS-----------LAPAD---------Y 495
Query: 448 HTPKT-----RELDNLLGDIYHKIL-DMERAITRDLVSHICL------FSDHLLKAVNFA 495
H +T R + + L KIL ER + + I + + +++ +
Sbjct: 496 HRKQTLVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAI 555
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDND-G 552
A LD LA VA+QNNY+RP + + I+ GRH + E + F+PND ++D D
Sbjct: 556 AILDVLQGLAEVAYQNNYIRPEIDNSGKIRIRAGRHPVVEKALREARFVPNDLQLDRDKA 615
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
R IITGPN GKS +++Q AL+V ++ +GSF+PA+ A +GL D S + A Q
Sbjct: 616 RFAIITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQ 675
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++ +V +L A+ SL +LDE G+GT T DG+ + Y + + KVL
Sbjct: 676 STFMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLE-NSRSKVLFA 734
Query: 665 THLTELLNEGCLPKSERLK-FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH +L +E+L +SV E +T +VFL +++PG A SYGLH A
Sbjct: 735 THYHQLTR-----LAEKLPGIINLSVSVKETGNT----VVFLKKVLPGKADKSYGLHVAR 785
Query: 724 LAGVPAEVIKRAAYVLEAAQNNK 746
LAG+P ++I RA +L+ + NK
Sbjct: 786 LAGLPEKLIIRAEDILQGLEKNK 808
>gi|402312017|ref|ZP_10830947.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium ICM7]
gi|400370678|gb|EJP23660.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium ICM7]
Length = 882
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 286/606 (47%), Gaps = 106/606 (17%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D ++ L++ +T + G S+ G+++K T MG R+LR + +P++
Sbjct: 265 YMIVDTSSRRNLELVETMREKKKNG--------SLLGVLDKTNTAMGARMLRGFLEQPLV 316
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHIL-----KKFNSPSFIYTASDWT 286
+ E + +R A++ L E L + D+ ++ K N+ + +
Sbjct: 317 NKERIINRQEAVAELFDRYIDREELREYLNPIYDLERLMSRVVTKNANTRDLL----SLS 372
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +K I + V K FE SE +++ N D +E I + L +
Sbjct: 373 ASMKMISPIKEVLKTFE---SEEIKKTNN--NLDRLEDIIDIIDRAINEDSPLSL----- 422
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
KE G ++ G+ +E+D+LRQ E +L ASLE
Sbjct: 423 ---KE---GNIINTGYNNEIDKLRQAKTEGKNWL---ASLE------------------- 454
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQ-------GFEF----AFSDMDGE--------TKRLFY 447
E+ + T ++ L+ G+ F +F DM + T Y
Sbjct: 455 ----------SEEKEKTGIKNLKVKFNKVFGYYFEVTNSFKDMVPDYFIRKQTLTNAERY 504
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
T K ++L+N++ K+ +E + ++ I + + + A +D SLA V
Sbjct: 505 TTDKLKDLENIILGAEDKLNSLEYEVFVEIRDEIAKNVNRIQSSAKAVAYIDAICSLATV 564
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSG 564
A+ NNY++P + ++DI++GRH + E + D+FI NDT +D N R++IITGPN +G
Sbjct: 565 AYNNNYVKPEINTTGIIDIKDGRHPVVETMLNDDSFIANDTYLDQNKKRMSIITGPNMAG 624
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS Y++Q ALI ++ IGSFVPA A + + D S + + QS+FM+++ +V
Sbjct: 625 KSTYMRQTALICMMAQIGSFVPAKQANLCVCDRIFTRVGASDDLASGQSTFMVEMTEVAN 684
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EG 674
+LR AT SL +LDE G+GT T DG+ + + + + K L TH EL EG
Sbjct: 685 ILRNATRNSLVILDEIGRGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSELEG 744
Query: 675 CLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
LP + Y +SV EN ++IVFL +++ G A SYG+ A LAGVP V R
Sbjct: 745 TLPG---VNNYCISV--KENG----DNIVFLRKIITGGADKSYGIQVAKLAGVPDSVTNR 795
Query: 735 AAYVLE 740
A ++E
Sbjct: 796 AKELIE 801
>gi|297205602|ref|ZP_06922998.1| DNA mismatch repair protein MutS [Lactobacillus jensenii JV-V16]
gi|297150180|gb|EFH30477.1| DNA mismatch repair protein MutS [Lactobacillus jensenii JV-V16]
Length = 860
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 171/599 (28%), Positives = 288/599 (48%), Gaps = 65/599 (10%)
Query: 157 ASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTP 216
A + I EVS ++L++ L++ + K MG S+F +++K T
Sbjct: 238 AHLQIAKSYEVS--QYLQMSHVVQNNLELVASAKTGKKMG--------SLFWLLDKTNTA 287
Query: 217 MGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKK--FN 274
MG RLL+ W RP+L + + R + L + + + LK V D+ + + F
Sbjct: 288 MGGRLLKQWLARPLLSISEIEKRQKIVQAMLDNYFTREGVKDALKGVYDLERLTGRIAFG 347
Query: 275 SPSFIYTASDWTAFLKSICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
S + A + +S+ ++ + + +FE G + L NF A I +L
Sbjct: 348 SAN----ARELLQLSRSLDAIPQIQSALFESGDED-------LANF-----AEQII--DL 389
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ + + + I N G L+REG ++LD R +L ++ + E
Sbjct: 390 SELAKKIKDTIVENPPILTTDGGLIREGINEQLDRYRDAMNNGKTWLAQLQAQE-----R 444
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y GY + + + + +G + G + Y TP+ +
Sbjct: 445 KATGIENLKIGYNKVFGYFIQVSKGNVAKVP----EGRYIRKQTLTGSER---YITPELK 497
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E +NL+ + +K D+E I DL +I F L + N A LD S A VA +NNY
Sbjct: 498 EHENLILEAENKSTDLEYQIFSDLREYIKTFIPKLQELGNTIASLDALTSFATVAEENNY 557
Query: 514 MRPILTLEPL-LDIQNGRH-VLQEMTVD-TFIPNDTRIDNDGRINIITGPNYSGKSIYIK 570
RP + + + GRH V++++ D ++IPND ++ +D + +ITGPN SGKS Y++
Sbjct: 558 CRPSFHQDSQEIKVVAGRHPVVEKVLADGSYIPNDIQMADDTSVFLITGPNMSGKSTYMR 617
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+ALI ++ +GSFVPA A + + D + + + QS+FM+++ + L+ AT
Sbjct: 618 QMALIAVMAQVGSFVPATEAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQNAT 677
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSER 681
+SL L DE G+GT T DG+ L G + Y + V K L TH EL + E L +
Sbjct: 678 KRSLVLFDEIGRGTATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTDMEKTL---DH 733
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
LK + + EN ++FL++++PG A SYG+H A LAG+P +V++ A+ +L+
Sbjct: 734 LKNIHVGATQ-ENGK-----LIFLHKILPGPADQSYGIHVAQLAGLPNKVLREASKMLK 786
>gi|408411547|ref|ZP_11182693.1| DNA mismatch repair protein mutS [Lactobacillus sp. 66c]
gi|407874286|emb|CCK84499.1| DNA mismatch repair protein mutS [Lactobacillus sp. 66c]
Length = 857
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 276/585 (47%), Gaps = 60/585 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ ++L++ T L++ Q+ G S+F +++K T MG RLL+ W R
Sbjct: 250 VGQYLQMSNTVQRNLELTQSATTGKKQG--------SLFWVLDKTHTAMGGRLLKQWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L E + +R + + + ++ + LK V D+ + S + +
Sbjct: 302 PLLSKEKILARQEMVQALIDNYFTRENVVDALKGVYDLERL-----SGRIAFGNVNPREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + + ES L DI + + V + + D
Sbjct: 357 LQLSRSLNAVGPILDA-LKESGDSNLIAYAADIDPQEEVAADIQKTIVDDPPMSTKD--- 412
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYI 406
G ++REG ++LD+ R ++L EV+ + + +L I Y
Sbjct: 413 ------GNIIREGVDEDLDKYRGAMNGGKQWLAQMEVSERQKTGIDNLK-------IGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + + ++ + T Y TP+ +E +NL+ + K
Sbjct: 460 RVFGYFIQVSKGNVSKVPQDR-------YMRKQTLTNAERYITPELKEHENLILEAESKS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
++E + L I L K A LD ++ A A + NY RP + +DI
Sbjct: 513 TELEHDLFAKLRDRIKEHIPELQKLGRQLAALDVLVAFAEDAEEKNYCRPTFAKKQEIDI 572
Query: 527 QNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+NGRH + E ++T +IPND +D D I +ITGPN SGKS Y++Q+ALI ++ +GSF
Sbjct: 573 KNGRHPVVEAVLETGSYIPNDLTMDEDTSIYLITGPNMSGKSTYMRQMALIAIMAQVGSF 632
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA+AAT+ + D + + + +S+FM+++ + L++A+S+SL L DE G+GT
Sbjct: 633 VPAEAATLPIFDQIFTRIGAADDLYSGKSTFMVEMSEANDALQRASSRSLILFDEIGRGT 692
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ L G I Y V K L TH EL E LP LK + + EN
Sbjct: 693 ATYDGMALAGAIIKYL-HDKVGAKTLFATHYHELTELEQTLP---HLKNIHVGATQ-ENG 747
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P EV++ A+ +L+
Sbjct: 748 K-----LIFLHKILPGPADQSYGIHVAKLAGLPREVLREASKMLK 787
>gi|219850607|ref|YP_002465040.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
gi|219544866|gb|ACL26604.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
Length = 968
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 268/565 (47%), Gaps = 57/565 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
GR S+ G++++ T MG RLLR W +P++ LE L R +A++ + L
Sbjct: 352 GRQGAKASLIGVLDRTCTAMGARLLRRWIAQPLIVLEPLQVRQHAVARLVAETMTRLELR 411
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL--- 314
E L + D+ L + + T D ++ L + + + + L ++
Sbjct: 412 EALAELPDMERALNRIAQGIAVATPRDMVQLRAALRKLPGIAQAIAPLLPDLLAPEMDGE 471
Query: 315 RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKG---YGTLVREGFCDELDELRQ 371
LL FD + L ++G + R+ E+G ++R GF LD L +
Sbjct: 472 PLLTFDPCSDVLDLLERALDDDPPALLGSSNYLRAAEEGGERPRRVIRPGFDQRLDALIK 531
Query: 372 IYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLE 426
EF++ E E + L + Y GY + I + KL + E
Sbjct: 532 ASRHAQEFIDRLETKERERTGIRSLK-------VGYNQVFGYYIEISRAVDPKLIPSHYE 584
Query: 427 QLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSD 486
+ Q ++ E Y T + + + LL D K++D+ER I + L I D
Sbjct: 585 RKQTL------VNAER----YVTEELKYYEGLLSDARLKLVDLERDIFQRLCDDIQQHLD 634
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPND 545
L V A LD +LA VA + Y++P L + +L I+ GRH + E T+ + FI ND
Sbjct: 635 RLRITVAAVARLDALAALAEVAVRGRYVQPTLRTDRVLRIKQGRHPVVERTLGEPFIGND 694
Query: 546 TRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
+D D +I IITGPN +GKS +++QVALI ++ IGSFVPAD A +GL D
Sbjct: 695 VDLDGDNVQILIITGPNMAGKSTFLRQVALITLMAQIGSFVPADEAEIGLVDRIFTRIGA 754
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF---- 652
+ QS+FM+++ + +L Q+T +SL +LDE G+GT T DG+ + + Y
Sbjct: 755 QDDIATGQSTFMVEMTETAALLMQSTPRSLIILDEVGRGTSTYDGMAIARAVVEYIHNEP 814
Query: 653 -VTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
+ C + L TH EL + LP R++ + M+ + + +VFL+ L P
Sbjct: 815 RLGC----RTLFATHYHELTALDTELP---RVRNFHMAAVERDGR------VVFLHELRP 861
Query: 711 GHALLSYGLHCALLAGVPAEVIKRA 735
G A SYG+H A LAG+PA VI+RA
Sbjct: 862 GGADRSYGIHVAELAGIPASVIRRA 886
>gi|347753700|ref|YP_004861265.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
gi|347586218|gb|AEP02485.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
Length = 875
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 280/591 (47%), Gaps = 54/591 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ +FL +D + L++ +T + G+ K+G S+ ++++ +T MG RLL+ W R
Sbjct: 261 VRRFLNIDYYSKRNLELTETIR-------GQGKKG-SLLWLLDETMTAMGGRLLKQWIGR 312
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L E + +RL + FL + E LK V D+ + + + +
Sbjct: 313 PLLKQEKIEARLQMVETFLNHYFEREDIRERLKEVYDLERLAGR-----VAFGNVNARDL 367
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
++ CSL + I + ESL K + + + +L+ I+ N
Sbjct: 368 IQLKCSLQQIPGI--RAVMESLESP--------ESKKLAALLDPCEELTDLLERAIEDNP 417
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G ++R+G+ +ELD R + ++ +ASLE + + + Y
Sbjct: 418 PVSVKEGGMIRDGYNEELDRYRDASKNGKQW---IASLERDERERTGIKSL--KVGYNRV 472
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + ++ L L+ + +R TP+ +E + L+ +++D
Sbjct: 473 FGYYI-----EVTKANLHLLEEGRYERKQTLANAERFI--TPELKEKEALILQAEERMID 525
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E + ++ +H+ F L + + +D S A+V+ + +Y +P+ + +L I
Sbjct: 526 LEYELFTEIRAHVKEFIPRLQRLAKAVSTIDVLQSFAVVSEKRHYTKPVFREDGVLKITE 585
Query: 529 GRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH + E +D +++PND +D + I +ITGPN SGKS Y++Q+AL V L+ IG FVP
Sbjct: 586 GRHPVVEKVLDSQSYVPNDCLMDENREILLITGPNMSGKSTYMRQIALTVILAQIGCFVP 645
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A + + D + + + QS+FM+++ + + AT +SL L DE G+GT T
Sbjct: 646 AREAELPVFDRIFTRIGAADDLISGQSTFMVEMLEAKNAIANATERSLILFDEIGRGTST 705
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ L I Y + ++ K L TH EL +E K + V E N
Sbjct: 706 YDGMALAQAMIEY-IHDEIGAKTLFSTHYHEL----TALSTELGKLQNVHVSAMEQNGK- 759
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+VFL+++ G A SYG+H A LAG+P +VI RA +L A +N + E
Sbjct: 760 ---VVFLHKIKEGPADKSYGIHVAKLAGLPEQVICRAEKILHALENQDNGE 807
>gi|149369766|ref|ZP_01889618.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
gi|149357193|gb|EDM45748.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
Length = 900
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 270/569 (47%), Gaps = 58/569 (10%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
+ ++ +++K ++PMG R+L+ W P+ ++E + R +S+ L +++ + +
Sbjct: 310 QNAVTLLDVIDKTISPMGGRMLKRWMALPLKNVETITRRHEVVSYLLQENQVLDKIKTNI 369
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K + D+ ++ K + + + S+ +++ V KI E +ESL+ +L
Sbjct: 370 KRIGDLERLISKVATGKI--SPREVIQLKNSLEAVVPVKKISETSENESLK----ILGSQ 423
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
+ E + E + I+ G + GF ELDELR I E+L
Sbjct: 424 LQECEVLRNKIKATIHEEAPVNIVK---------GNAIASGFHPELDELRAIATGGKEYL 474
Query: 381 EEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+++ + E + L +F GY + + D E ++
Sbjct: 475 DKMLARETERTGITSLKIASNNVF----------GYYIEVRNTHKDKVPTEWVRKQTLVN 524
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E + + KI +E+ I L+ + F + +
Sbjct: 525 AER--------YITEELKEYEAKILGAEEKIGALEQEIFVKLIQWMIQFIGPVQQNAKLI 576
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDND- 551
AELDC S A A NY+RP+ LDI+ GRH + +++ D FI ND +D +
Sbjct: 577 AELDCLGSFATQAADANYVRPLFDETTDLDIKEGRHPVIEKQLPPDAPFISNDVFLDREH 636
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPA A +G+ D S +++
Sbjct: 637 QQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAGALRMGVVDKIFTRVGASDNISMG 696
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLV 663
+S+FM+++++ +L + +SL LLDE G+GT T DGI + Y KVL
Sbjct: 697 ESTFMVEMNETASILNNISERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPSHAKVLF 756
Query: 664 CTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH E +NE S R+K Y +SV E +D++FL +LVPG + S+G+H A
Sbjct: 757 ATHYHE-INEMTETFS-RIKNYNVSVKELE------DDVLFLRKLVPGGSQHSFGIHVAK 808
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHVERWS 752
+AG+P V+ RA +L+ + + E S
Sbjct: 809 MAGMPQAVLNRANKILKRLEKSHSSEELS 837
>gi|332291445|ref|YP_004430054.1| DNA mismatch repair protein MutS [Krokinobacter sp. 4H-3-7-5]
gi|332169531|gb|AEE18786.1| DNA mismatch repair protein MutS [Krokinobacter sp. 4H-3-7-5]
Length = 863
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 270/560 (48%), Gaps = 66/560 (11%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
+ ++ +++K + MG RLL+ W P+ L+ + R + +SF + E+ + +K
Sbjct: 274 KAITLIDIIDKTTSAMGGRLLKRWLALPLKRLDEIERRHDVVSFLSDNGEIFDKMQSNIK 333
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ ++ K + + + S+ +++ + + +L LN I
Sbjct: 334 KIGDLERLISKVATGKI--SPREVIQLKNSLEAIVPIKGL-------ALNTDNESLNI-I 383
Query: 322 VEKAASCIT----TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
E+ C+ + E + II G + GF +ELDELR + +
Sbjct: 384 GEQLQDCVVLRDKIKETLKEEAPVSIIK---------GGAIAAGFHNELDELRVLSQGGK 434
Query: 378 EFLEEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
++LE++ + E + L +F GY + + D E ++
Sbjct: 435 DYLEKMLARETERTGITSLKIASNNVF----------GYYIEVRNTHRDKVPEEWIRKQT 484
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
++ Y T + +E + + +I +E+ + LV+ + F +
Sbjct: 485 LVNAER--------YITEELKEYEGKILGAEERIQAIEQQLFAALVNWMSSFIPQVQANA 536
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID 549
+ A+LDC L +A +NNY+RP L +DI+ GRH + E + + ++ ND +D
Sbjct: 537 SQIAQLDCLLGFTQLARENNYVRPTLDESQAIDIKEGRHPVIEKQLPLGEAYVTNDVYLD 596
Query: 550 N-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHM 600
+ D ++ +ITGPN SGKS ++Q ALIV L+ +GSFVPA AA +G+ D S ++
Sbjct: 597 SGDQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAAHIGVVDKIFTRVGASDNI 656
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPK 660
+ +S+FM+++++ +L + +SL LLDE G+GT T DGI + + PK
Sbjct: 657 SMGESTFMVEMNETASILNNLSDRSLVLLDEIGRGTSTYDGISIAWAISEFLHEHPGRPK 716
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH E LNE C ER+K Y +SV ++N ++FL +LVPG + S+G+H
Sbjct: 717 TLFATHYHE-LNEMC-ETFERIKNYNVSVKELKDN------VLFLRKLVPGGSAHSFGIH 768
Query: 721 CALLAGVPAEVIKRAAYVLE 740
A +AG+P +V++RA ++E
Sbjct: 769 VAKMAGMPQQVLRRATKMME 788
>gi|300794684|ref|NP_001178886.1| DNA mismatch repair protein Msh3 [Rattus norvegicus]
Length = 1105
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 290/597 (48%), Gaps = 71/597 (11%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F++++ T L+I Q G S+ +++ T GRR L+ W +P+
Sbjct: 491 EFMRINGTTLRNLEILQNQTDMKTRG--------SLLWVLDHTKTSFGRRKLKKWVTQPL 542
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY----TASDWT 286
L L ++N+RL+AIS L SE + E L ++ +P + + S IY + ++
Sbjct: 543 LKLRDINARLDAISDVLHSESSVFEQIENL--LRKLPDVERGLCS---IYHKKCSTQEFF 597
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+K++C L + ++ + Q LL ++E EL E + +++
Sbjct: 598 LIVKNLCQLKSELQALMPAVNSHV--QSDLLRARVLE------VPELLSPVEPYLKVLNE 649
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+K L ++ L + I + E E + S+++ L L K + +P + Y+
Sbjct: 650 QAAKAGDKTELFKD-----LSDFPLIKKRKNEIQEVIHSIQM-HLQELRKILKLPSLQYV 703
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD----GETKRLF-YHTPKTRELDNLLGD 461
G + +++ + D G TK + +H+P E L
Sbjct: 704 TVSGQEFMV-----------EIKNSAVSCVPTDWVKVGSTKAVSRFHSPFVVENYRRLNQ 752
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLE 521
+ +++ A D + + L KAV+ A +DC SLA VA Q +Y RP L E
Sbjct: 753 LREQLVLDCNAEWLDFLENFGEHYHTLCKAVDHLATVDCIFSLAKVAKQGSYCRPTLQEE 812
Query: 522 PLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVF 577
+ I+NGRH + ++ + D F+PN T + D R+ IITGPN GKS YIKQVAL+V
Sbjct: 813 KKIIIKNGRHPMIDVLLGEQDQFVPNSTNLSQDSERVMIITGPNMGGKSSYIKQVALVVI 872
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGS+VPA+ AT+G+ D + ++ +S+FM +L ++++AT +SL +L
Sbjct: 873 MAQIGSYVPAEEATIGIVDGIFTRRGAADNIYKGRSTFMEELTDTAEIIQKATQRSLVIL 932
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DGI + T+ YF+ DV L TH + E P E++ Y M
Sbjct: 933 DELGRGTSTHDGIAIAYATLEYFIR-DVKSLTLFVTHYPPVCELEKRYP--EQVGNYHMG 989
Query: 689 VLRPEN----NSTDVE----DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
L E+ +S D+E + FLY++ G A SYGL+ A LA VP E++++AA+
Sbjct: 990 FLVNEDGSKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREILQKAAH 1046
>gi|365844941|ref|ZP_09385747.1| DNA mismatch repair protein MutS [Flavonifractor plautii ATCC
29863]
gi|364562465|gb|EHM40314.1| DNA mismatch repair protein MutS [Flavonifractor plautii ATCC
29863]
Length = 865
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 178/638 (27%), Positives = 306/638 (47%), Gaps = 86/638 (13%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
G + ++A GGLL+ L + D + ++ + +F++LD TA L+
Sbjct: 233 GDDAALQAVGGLLSYLYETQKTDLSH----------LSTLTYFTTGQFMELDLTARRNLE 282
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + G S+ +++K T MG RL+R W RP+L + RL A+
Sbjct: 283 LTETLRSKEKKG--------SLLWVLDKTRTAMGHRLIRAWMERPLLSPAAIGRRLGAVG 334
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ L TL+ + D+ ++ + +Y TA + + +L + +
Sbjct: 335 ELVGDAIGREELTLTLREITDLERLIGRI-----VY----GTAGGRDLVALAN-----GL 380
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYEL--VIGIIDVNRS----KEKGYGTLV 358
G +LRE+L + ++ + + EL + EL +IG V+ +E G+ +
Sbjct: 381 GRLPALRERLAGCSSALL----ASLREELDDLTELRELIGRAIVDEPPFSVREGGF---I 433
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--- 415
R G+ E+D LR I VAS+E + + + Y GY + +
Sbjct: 434 RAGYHPEVDRLRDIMANGKGL---VASIEAREKEKTGIKSLK--VGYNKVFGYYIEVSKS 488
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ +++ DT + + T + T + +EL++ + +I +E +
Sbjct: 489 YYDQVPDTYIRK-----------QTLTNCERFITQELKELEHEILSAQDRITALEFELFC 537
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
DL + ++ A++D S A VA + Y RP + L ++I GRH + E
Sbjct: 538 DLREQAAAQVGRIQRSAAAVAQVDVLSSFAAVAAEQGYCRPEVDLSDAIEITEGRHPVVE 597
Query: 536 MTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ F+PNDT +DN D + IITGPN +GKS Y++QVALIV ++ +GSFVPA +A +
Sbjct: 598 KMLKHALFVPNDTHMDNHDNTVAIITGPNMAGKSTYMRQVALIVLMAQMGSFVPARSARI 657
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
G+ D S ++A QS+FM+++ +V +L+ AT++SL +LDE G+GT T DG+ +
Sbjct: 658 GIVDRVFTRIGASDDLSAGQSTFMVEMTEVAELLKNATAKSLLILDEIGRGTSTYDGMSI 717
Query: 645 LGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDI 702
+ + + K L TH EL EG +P +K Y ++ + ++ DI
Sbjct: 718 ARAVLEFCADKKRLGAKTLFATHYHELTALEGQIPG---VKNYNIAAKKKKD------DI 768
Query: 703 VFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+FL ++V G A SYG+ A LAGVP V++RA +LE
Sbjct: 769 LFLRKIVRGGADQSYGIEVAKLAGVPEPVLRRARKILE 806
>gi|399575656|ref|ZP_10769414.1| DNA mismatch repair protein mut [Halogranum salarium B-1]
gi|399239924|gb|EJN60850.1| DNA mismatch repair protein mut [Halogranum salarium B-1]
Length = 894
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 209/727 (28%), Positives = 335/727 (46%), Gaps = 108/727 (14%)
Query: 59 KSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYL 118
+ ++ FL++L+ DGT ++ L ++ F+ +A HR+ R D+ L
Sbjct: 170 RGDDEFLASLR--DGTD--ASLSLHEAEAFAPGRARHRV---REQFGDEALE-------- 214
Query: 119 NSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDA 177
+ + SE VRA+G +LA ++ E+G + ++ + L+LDA
Sbjct: 215 --SVGIDSERAVRAAGAVLAYVD-----------ETGAGVLQSMTRLQAYHARDHLELDA 261
Query: 178 TAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
T L++ +T + GR ++G S+ ++ VT G RLLR W RP D + L
Sbjct: 262 TTQRNLELTETMQ-------GR-RDG-SLLDTLDHTVTSPGGRLLREWLTRPRRDPDELR 312
Query: 238 SRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLH 297
R +S L SE L E ++ V D + L++ S S +A LL
Sbjct: 313 RRQTCVSA-LASEALA---REQVRDVLDGAYDLERLASRSASGSAG--------ARELLS 360
Query: 298 VNKIFEV--GISESLREQLRLLNF---DIVEK----AASCITTELAYVYELVIGIIDVNR 348
V F + + +++ E RL++ D+VE+ AA+ + EL +
Sbjct: 361 VRDTFAILPALVDAI-EGSRLVDSPLRDVVERPDREAAAALHDELDDA-------LAEEP 412
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYI 406
K G L + G+ DELD+L + +E +L+++ E + + HL + YI
Sbjct: 413 PKTVTQGELFKRGYDDELDDLIERHESAKSWLDDLGPREKREHGIQHLQVDRNKTDGYYI 472
Query: 407 HQIGYLMC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Q+G + E + TL+ + + +D E +R L+ + GD+ +
Sbjct: 473 -QVGKSNTDRVPEHYREIKTLKNSKRY---VTDELEEKERDILR------LEEVRGDLEY 522
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
++ +DL + ++ L AE+D SLA A N+++RP L L
Sbjct: 523 ELF-------QDLRERVAEQAELLQDVGRTLAEVDTLASLATHAAGNDWVRPELDEGDAL 575
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
I+ GRH + E T D F+PND R+D I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 576 TIEAGRHPVVEQTTD-FVPNDLRLDQRRGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 634
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA +ATVG+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 635 VPARSATVGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 694
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + LP + + V E +
Sbjct: 695 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTSLADHLP-----RVANVHVAADERD 748
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
D+ FL +V G SYG+H A LAGVP V+ RA VL ++ K +E +
Sbjct: 749 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPKPVVDRATDVLGRLRDEKAIEAKGGDG 804
Query: 756 ISAQDQQ 762
S + Q
Sbjct: 805 GSGEPVQ 811
>gi|160892634|ref|ZP_02073424.1| hypothetical protein CLOL250_00164 [Clostridium sp. L2-50]
gi|156865675|gb|EDO59106.1| DNA mismatch repair protein MutS [Clostridium sp. L2-50]
Length = 865
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 174/598 (29%), Positives = 290/598 (48%), Gaps = 78/598 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ ++ S++ F+ LD+ L++ +T + G S+ +++K T MG R
Sbjct: 249 INHIVLYSIDDFMILDSATRRNLELCETLRDKQKRG--------SLLWVLDKTKTAMGAR 300
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+LR+ +P++ +++ +RL+AI + E L + D+ ++ + + S
Sbjct: 301 MLRSMIEQPLIYKKDIEARLDAIEQLNNDMINRDEMREYLNPIYDLERLMTRISLRS--A 358
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D AF S+ L ++ ++ ++ L DI EK EL +Y+L+
Sbjct: 359 NPRDMIAFKTSLSYLPYIRQLLQIYPDGLLA--------DIYEK-----MDELQDIYDLL 405
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEM 398
I+ + G + ++G+ +E+D L+ + +L E+ E + + +L +
Sbjct: 406 ERSINDDPPILIREGGIFKDGYLEEIDTLKSAKTDGKTWLAELEEREKQKTGIKNL-RIK 464
Query: 399 FVPCIVYIHQI--GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
F Y ++ Y + E + TL + + T ELD
Sbjct: 465 FNKVFGYYFEVTNSYKDLVPEYFIRKQTLANSERY-------------------TTEELD 505
Query: 457 NLLGDIYHKILDMERAITRDLVSHICL---FSDHLLKAVNFA---AELDCFLSLALVAHQ 510
NL G I + ++ + ++I L + +L+ N A A LDC SL+ VA
Sbjct: 506 NLAGSI---LGSEDKLYALEYETYIALRDKIAGEILRVQNTARQIALLDCLCSLSYVASA 562
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSI 567
N ++RP + + ++DI+ GRH + E M FI NDT ++N + RI+IITGPN +GKS
Sbjct: 563 NQFVRPEINEDGVIDIKEGRHPVVEKMMNNGMFISNDTYLNNFESRISIITGPNMAGKST 622
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
Y++Q ALIV ++ IGSFVPA +A +G+ D S + + QS+FM+++ +V +LR
Sbjct: 623 YMRQTALIVLMAQIGSFVPAASANIGICDRIFTRVGASDDLASGQSTFMVEMSEVANILR 682
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLP 677
AT SL +LDE G+GT T DG+ + + Y + + K L TH EL EG L
Sbjct: 683 NATKNSLLILDEIGRGTSTYDGLSIAWAVVEYISNSELLGAKTLFATHYHELTELEGKLS 742
Query: 678 KSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ Y ++V D +DIVFL ++V G A SYG+ A LAGVP VI RA
Sbjct: 743 S---VNNYCIAV------KEDGDDIVFLRKIVKGGADRSYGIQVAKLAGVPDIVIDRA 791
>gi|350570170|ref|ZP_08938541.1| DNA mismatch repair protein [Neisseria wadsworthii 9715]
gi|349797455|gb|EGZ51219.1| DNA mismatch repair protein [Neisseria wadsworthii 9715]
Length = 855
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 269/600 (44%), Gaps = 64/600 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+DS+ + +++ +DA L+I T K+ ++F ++++C T MG R
Sbjct: 252 LDSLSLETEQQYIGMDAATRRNLEITHTLS---------GKKSPTLFSVLDRCATHMGSR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL W P+ + +++ +R A++ + + +H LK + DI I + S
Sbjct: 303 LLAQWLHHPLRNRQHITARQQAVAAL---QNEQSHIHACLKNIADIERIAARIAVGS--A 357
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D + S+ +L + G+ L+ L E A + A + E
Sbjct: 358 RPRDLSGLRDSLFALADIRLPNTAGL-------LQTLQNIFPEGVAVAERLQAAILPEPA 410
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEM 398
+ + D G ++ +GF ELDELR I EFL E E L L E
Sbjct: 411 VWLRD---------GGVINQGFNAELDELRHIQTHGDEFLLALETRERERTGLSTLKVEF 461
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
YI +L T EQ ++ +R TP+ + ++
Sbjct: 462 NRVHGFYI------------ELSKTQAEQAPA-DYQRRQTLKNVERFI--TPELKTFEDK 506
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ L +E+ + L++ + L K AA LD S A +A + +Y P
Sbjct: 507 VLAAQDNALALEKKLYEALLADLQAELPLLQKTAKAAAALDVLCSFAALADEQDYRCPEF 566
Query: 519 TLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
P ++I+NGRH + E V F N T +DN R+ ++TGPN GKS Y++QVALI L
Sbjct: 567 VDYPCIEIENGRHPVVEQQVPRFTANHTHLDNKHRLMLLTGPNMGGKSTYMRQVALITLL 626
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+H GSFVPADAA +G D S + + +S+FM+++ + +L AT QSL L+D
Sbjct: 627 AHTGSFVPADAAKIGPADQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLVLMD 686
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
E G+GT T DG+ L + + + L TH EL LP++ + +V
Sbjct: 687 EVGRGTSTFDGLALAQAIAEHLIQKN-KSFSLFATHYFELTR---LPEA-----HASAVN 737
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
+ + +DIVFL+ + PG A SYG+ A LAG+PA +K A LE ++ R
Sbjct: 738 MHLSALEEGQDIVFLHHIEPGPASKSYGIAVAKLAGLPARALKSAQKHLEELESQAAASR 797
>gi|304440469|ref|ZP_07400358.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371221|gb|EFM24838.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 864
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 305/599 (50%), Gaps = 62/599 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
+ +++L + + LD + L+I + G+ ++ S+ +++ T MG+RLLR
Sbjct: 259 IADINLEQKMILDENSMRNLEILK--------GLNSNRKSGSLLEVLDYTKTSMGQRLLR 310
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
W P+L+++ + R + + F L+ + L + D+ + K + +
Sbjct: 311 RWIEEPLLNVDEIKKRQDYVEEFKSDFILLDDVRSILSSIIDMERQMVKISDNEI--NPN 368
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLRE---QLRLLNFDIVEKAASCITTELAYVYELV 340
++ A S+ S++ + E ++L E +L+ L ++I+E+ S I V +
Sbjct: 369 EFNALKGSLASVMELKSYLEGSNFKNLNEISYELKPL-YNIIEEIDSMI------VEDAP 421
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ +DV +++G+ +ELDEL ++ ++ +FL ++ + E + K +
Sbjct: 422 VKTVDV---------KFIKDGYNEELDELFRLSKDGKKFLIDLEAKEKEETG--IKNL-- 468
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I Y +GY + + + LD ++ S+ R F T + +E+++ +
Sbjct: 469 -KIKYNKILGYFIEVTKSALDMVPERYIRKQTLVGSE------RFF--TIELKEMESKIL 519
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+ + + ++ + +L+ + ++ LL+ + +D LA A +N ++RP L
Sbjct: 520 NAHDEANSLQLKLYDNLIENFKKYTSLLLEVSEIVSRIDVLQGLAKSAIENRFIRPELNE 579
Query: 521 EPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVF 577
+ + I++GRH + E D+FIPNDT +D D I+IITGPN +GKS Y++Q+ALIV
Sbjct: 580 DNTIIIKDGRHPIVEFKNRDDSFIPNDTILDMDKNLIHIITGPNMAGKSTYMRQIALIVI 639
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGSFVPA + +G+ D S +++ +S+FM+++ +V +L+ AT +SL +L
Sbjct: 640 MAQIGSFVPAKSCNIGIVDRIFTRIGASDNLSKGESTFMVEMKEVANILKNATDKSLIIL 699
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ + + Y ++ ++ K + TH E L K E + +S
Sbjct: 700 DEVGRGTSTFDGMSIAWSIVEY-ISENIGAKTVFATHYHE------LSKIEET-YKNVSN 751
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
L + D E+I+FL ++V G SYG+ A LAG+ +V KRA +L++ + K +
Sbjct: 752 LNIK-VKKDGEEIIFLRKIVEGWTDNSYGIDVAKLAGIDEKVTKRAEEILKSLEKTKDL 809
>gi|373115723|ref|ZP_09529890.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670110|gb|EHO35198.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
7_1_58FAA]
Length = 865
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 178/638 (27%), Positives = 306/638 (47%), Gaps = 86/638 (13%)
Query: 125 GSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQ 184
G + ++A GGLL+ L + D + ++ + +F++LD TA L+
Sbjct: 233 GDDAALQAVGGLLSYLYETQKTDLSH----------LSTLTYFTTGQFMELDLTARRNLE 282
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T + G S+ +++K T MG RL+R W RP+L + RL A+
Sbjct: 283 LTETLRSKEKKG--------SLLWVLDKTRTAMGHRLIRAWMERPLLSPAAIGRRLGAVG 334
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
+ L TL+ + D+ ++ + +Y TA + + +L + +
Sbjct: 335 ELVGDAIGREELTLTLREITDLERLIGRI-----VY----GTAGGRDLVALAN-----GL 380
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYEL--VIGIIDVNRS----KEKGYGTLV 358
G +LRE+L + ++ + + EL + EL +IG V+ +E G+ +
Sbjct: 381 GRLPALRERLAGCSSALL----ASLREELDDLTELRELIGRAIVDEPPFSVREGGF---I 433
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI--- 415
R G+ E+D LR I VAS+E + + + Y GY + +
Sbjct: 434 RAGYHPEVDRLRDIMANGKGL---VASIEAREKEKTGIKSLK--VGYNKVFGYYIEVSKS 488
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ +++ DT + + T + T + +EL++ + +I +E +
Sbjct: 489 YYDQVPDTYIRK-----------QTLTNCERFITQELKELEHEILSAQDRITALEFELFC 537
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
DL + ++ A++D S A VA + Y RP + L ++I GRH + E
Sbjct: 538 DLREQAAAQVGRIQRSAAAVAQVDVLSSFAAVAAEQGYCRPEVDLSDAIEITEGRHPVVE 597
Query: 536 MTVD--TFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ F+PNDT +DN D + IITGPN +GKS Y++QVALIV ++ +GSFVPA +A +
Sbjct: 598 KMLKHALFVPNDTHMDNRDDTVAIITGPNMAGKSTYMRQVALIVLMAQMGSFVPARSARI 657
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
G+ D S ++A QS+FM+++ +V +L+ AT++SL +LDE G+GT T DG+ +
Sbjct: 658 GIVDRVFTRIGASDDLSAGQSTFMVEMTEVAELLKNATAKSLLILDEIGRGTSTYDGMSI 717
Query: 645 LGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDI 702
+ + + K L TH EL EG +P +K Y ++ + ++ DI
Sbjct: 718 ARAVLEFCADKKRLGAKTLFATHYHELTALEGQIPG---VKNYNIAAKKKKD------DI 768
Query: 703 VFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+FL ++V G A SYG+ A LAGVP V++RA +LE
Sbjct: 769 LFLRKIVRGGADQSYGIEVAKLAGVPEPVLRRARKILE 806
>gi|170046963|ref|XP_001851012.1| MutSH5 [Culex quinquefasciatus]
gi|167869560|gb|EDS32943.1| MutSH5 [Culex quinquefasciatus]
Length = 766
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 170/621 (27%), Positives = 297/621 (47%), Gaps = 51/621 (8%)
Query: 96 RLIYLRVTGMDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESG 155
+++ + + GM S ER +L S++ + E+ + A G LL +LE Q
Sbjct: 119 KILSMNLPGMPTQASESERRIFLASVLPVEQELLIHAVGSLLKLLE---------QIIPA 169
Query: 156 NASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVT 215
+ + + ++ + L +D +++LQIF + HPS S+ + N+C +
Sbjct: 170 DDGPLVTRINVLTPDTQLIIDELTYQSLQIFNSRLHPSGFKQKVESSSCSLIKLFNRCSS 229
Query: 216 PMGRRLLRNWFLRPILDLENLNSRLNAISFFLC-----SEELMASLHETLKYVKDIPHIL 270
+G+ LR +P+ DL L RLN + + + S E M ++ L V+ + +
Sbjct: 230 NIGKLELRTIMQQPVRDLAELELRLNTVQWSVAGRNSRSAEEMRNVIGNLTKVQPVYRKI 289
Query: 271 KKFNSPSFIYTASDWTAFLKSICSLLHVNKI-FEVGISESLREQLRLLNFDIVEKAASCI 329
K ++ + SDW + K++ L + K+ VG E LR +I+ + S
Sbjct: 290 AKQSTKN-----SDWKSLKKNVYYLYMLCKLCLAVGEPE-----LRGTVINILAEFVSEE 339
Query: 330 TTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELV 389
L + + ++D++R + T V+ G ELD +R ++E L E + ++
Sbjct: 340 ENALKQLLFTLDEVVDLDRGTQNNKFT-VKRGIDRELDRIRTSFDETRGLLMETSRVDFE 398
Query: 390 QLPHLCKEMFVPCIVYIHQIGYLMCIFE-EKLDDTTLEQLQGFEFAFSDMDGETKRLFYH 448
LP +++V ++ GY+ E+L D + + F +G +++
Sbjct: 399 NLPVDMSDVYV---TFLPSYGYVFSSSRCEELRDPAVFEQSAMNLVFQS-EGS---VYFQ 451
Query: 449 TPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVA 508
+EL+ G++ + D E + LVS + H+L +LD L+ A VA
Sbjct: 452 NDMCKELNTEFGNLLATMNDRENTVLMKLVSFVDQAIPHVLAIFKHVGKLDVLLAFASVA 511
Query: 509 HQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRID--NDGRINIITGPNYSGKS 566
+ RP LT + +L I+ GRH L E T+ PNDT N+ +N+ +GK+
Sbjct: 512 VCQEFTRPTLTDQKILQIKQGRHPLVEQ-FKTYHPNDTEFSAANERIVNVFASRESTGKT 570
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMML 618
+Y+K++ALI +L+HIGSFVPA +ATVGL DS + + + +SSFM +L+Q+ +L
Sbjct: 571 LYLKEIALIAYLAHIGSFVPAQSATVGLLDSIYSRLDFPESIFSGKSSFMGELYQMSNIL 630
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLNEGCLP 677
TS+SL L+DEFGKGT +G LL ++ + + P V V T T++ + L
Sbjct: 631 MNTTSKSLVLIDEFGKGTTYTEGKALLISSVEHLLQKGSQAPIVTVATQFTDI--KRFLG 688
Query: 678 KSERLKFYTMSVLRPENNSTD 698
+ L+ Y +PE++S D
Sbjct: 689 DNRYLRIYAT---QPESSSED 706
>gi|361126906|gb|EHK98892.1| putative MutS protein like protein [Glarea lozoyensis 74030]
Length = 442
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 197/389 (50%), Gaps = 51/389 (13%)
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD- 437
L + L L LP + C+ + Q+G+L + + + + +G + D
Sbjct: 4 LLTQAHGLLLNDLPEWAMQYVTTCL-FFPQLGFLTVVVLDPETGASKYEGEGVDDDIWDK 62
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
M +Y K RE+DN GD+Y I E I DL I L++A + E
Sbjct: 63 MFVTNDSAYYKNRKMREMDNYFGDLYGLIYK-EIEIIHDLAVKILQDEKVLIEASDLLGE 121
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDN------- 550
LD ++LAL A + P LT+ ++ I+ GRH LQE+TV ++IPND I
Sbjct: 122 LDSLVALALGAQKYRLNPPRLTMANVIQIEGGRHPLQELTV-SYIPNDCFIRGGAGDDEE 180
Query: 551 ----------------------DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ + I+TGPNYSGKS+Y+KQVALIVFL+HIGSFVPAD
Sbjct: 181 EEDTEPIISPSRSSSSLLQSIEEPSMLIMTGPNYSGKSVYLKQVALIVFLAHIGSFVPAD 240
Query: 589 AATVGLTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
AT+GLTD K +T + R+ T +SL ++DEFGKGT DG GL G
Sbjct: 241 RATIGLTD-KILTR-------------IATRETTHRSLVVVDEFGKGTNAHDGAGLSCGV 286
Query: 649 INYFVTCDVP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLY 706
+ YF++ + PKVL TH E+ G LP+ L F M V ++ VED I +LY
Sbjct: 287 LEYFLSLENKRPKVLAATHFHEIFANGFLPERPELGFGHMEV--QVDSEASVEDQITYLY 344
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+ VPG + S+G CA++ G+ V++RA
Sbjct: 345 KFVPGRSNSSFGTLCAMMNGIDQAVVERA 373
>gi|261878911|ref|ZP_06005338.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
gi|270334493|gb|EFA45279.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
Length = 888
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 163/604 (26%), Positives = 292/604 (48%), Gaps = 81/604 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +K++++D +L++ Q + ++G S+ +++ VTPMG R
Sbjct: 268 ITALQRIEEDKYVRMDKFTIRSLELIQPMQ----------EDGRSLLNILDSTVTPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W + P+ D+ ++ R + + +F + + E L + D+ I+ K SP
Sbjct: 318 LLRRWMVFPLKDVARIHDRQDIVEYFFKQPDFRQVVDEQLHRIGDLERIISKVAVGRVSP 377
Query: 277 -SFIYTASDWTAF--LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + TA +KS C + +G +L E LR ++ A I +
Sbjct: 378 REVVQLKNALTAIQPIKSACQSADNVSLKRLGEQLNLCESLR-------DRIAHEINPDP 430
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +N+ G ++ +G +ELD+LR I + FL +E+ Q
Sbjct: 431 PLL---------INK------GNVMADGCNEELDQLRSISRKGKNFL-----IEIQQREA 470
Query: 394 LCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTP 450
+ + + + GY + + F++K+ +T + + + +R Y TP
Sbjct: 471 DSTGISSLKVGFNNVFGYYLEVRNTFKDKVPETWIRK---------QTLAQAER--YITP 519
Query: 451 KTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQ 510
+ +E + + KI+++E + +L+ + F + N A +DC LS A V+
Sbjct: 520 ELKEYEEKILGADEKIIELEMRLFNELILAMQDFIPQIQINANIIAHIDCLLSFAKVSET 579
Query: 511 NNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKS 566
N Y+RP + +LDIQ GRH + E + + ++PND +D ++ IITGPN +GKS
Sbjct: 580 NLYVRPEVDDSDILDIQQGRHPVIETQMPLGEHYVPNDVYLDTAKQQVMIITGPNMAGKS 639
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMML 618
++Q ALIV L+ IG FVPA+ A VGL D S +++ +S+FM+++ + +L
Sbjct: 640 ALLRQTALIVLLAQIGCFVPAERARVGLVDKIFTRVGASDNLSQGESTFMVEMTEASNIL 699
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLP 677
T SL L DE G+GT T DGI + + Y + L TH E LNE +
Sbjct: 700 NNVTPHSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKAQARTLFATHYHE-LNE--ME 756
Query: 678 KS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
K R+K + +SV + ++FL +L+PG + S+G+H A +AG+P +++R+
Sbjct: 757 KHFARIKNFNVSVKEVDGK------VIFLRKLMPGGSEHSFGIHVAEIAGMPPSIVRRSN 810
Query: 737 YVLE 740
+L+
Sbjct: 811 TILK 814
>gi|392412916|ref|YP_006449523.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
gi|390626052|gb|AFM27259.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
Length = 870
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 164/597 (27%), Positives = 275/597 (46%), Gaps = 85/597 (14%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L ++ LD + L+IF K G ++ ++++ +T MG R +R+W
Sbjct: 262 LGNYMVLDRSTTRNLEIFTNLKDGGTSG--------TLLKLLDRTLTAMGARTIRSWTAY 313
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHI-----LKKFNSPSFIYTAS 283
P+LDL ++ R++A+S F+ S L + LK + D+ I L+ N +Y
Sbjct: 314 PLLDLREIHRRIDAVSAFVDSTITRGELRDALKGIGDLERIAGKISLRSANPRDLVY--- 370
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
L++ C + V G+ L +LR N D +L+YV + +
Sbjct: 371 -----LRNSCEKIPVVLKLLSGVESELVGELR--NAD-----------DLSYVAHAIASV 412
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC- 402
+ G L+R+G+ ELDELR I + E++ + + E +E +P
Sbjct: 413 LVDAPPVSLKDGGLIRDGYNQELDELRSISHKGKEWIAAIEARE-------KEETGIPNL 465
Query: 403 -IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGD 461
+ Y GY + + + ++ A ++ Y T +E +N
Sbjct: 466 KVGYNRVFGYYIEVTKSYQSKVPASYIRKQTLANAER--------YITDDLKEYEN---- 513
Query: 462 IYHKILDMERAITRDLVSHICLFSDHLLKAV-------NFAAELDCFLSLALVAHQNNYM 514
K+L+ + I L LL+ + + LD LSLA A Y+
Sbjct: 514 ---KVLNAQERIVEIEEEIFNLLRTRLLEVIGRIQATASAIGTLDAILSLAETAAVRGYV 570
Query: 515 RPILTLEPLLDIQNGRHVLQEM--TVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQ 571
RP + + I +GRH + E + +T++PND ++ +I IITGPN +GKS Y++Q
Sbjct: 571 RPTVHEGDEIKILDGRHPVVETFDSRETYVPNDVILNRTSDQILIITGPNMAGKSTYMRQ 630
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
ALIV + +G FVPA A +GL D + ++ QS+FM+++++ +L A+
Sbjct: 631 TALIVIMGQMGGFVPASEAQIGLVDRIFTRIGAADYLAYGQSTFMVEMNETADILHNASV 690
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
+SL LLDE G+GT T DG+ + Y D P+ L TH EL++ + ER+
Sbjct: 691 RSLVLLDEVGRGTSTFDGLSIAWAVTEYLHDRADGGPRTLFATHYHELVDIPLV--KERV 748
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ + ++V ++ IVFL ++VPG SYG+ A LAG+P V+ RA +L
Sbjct: 749 RNFNIAVKEWKDR------IVFLRKIVPGGCSRSYGIQVAKLAGIPDAVVGRAQEIL 799
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus familiaris]
Length = 1066
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 291/610 (47%), Gaps = 100/610 (16%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ ++ T L+I Q G S+ +++ T GRR L+ W ++P+
Sbjct: 464 EFMTINGTTLRNLEILQNQTDMKTKG--------SLLWVLDHTKTSFGRRKLKKWVVQPL 515
Query: 231 LDLENLNSRLNAISFFLCSEE-LMASLHETLKYVKDIPHIL-----KKFNSPSFI----- 279
L L +N+RL+A+S L SE + + L+ + DI L KK ++ F
Sbjct: 516 LKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKT 575
Query: 280 --YTASDWTAFLKSICSLLHVN--KIFEVGISESL---REQLRLLNFDIVEKAASCITTE 332
+ S++ A + ++ S + + + F + I E L LR+LN E+AA +
Sbjct: 576 LYHLKSEFQALIPAVNSHVQSDLLRTFILEIPELLSPVEHYLRILN----EQAA-----K 626
Query: 333 LAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP 392
+ EL + D K++ DE++++ +++ L+E+ +
Sbjct: 627 IGDKTELFKDLTDFPLIKKRK-------------DEIQEVTDKIQMHLQEIRKI------ 667
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD----GETKRLF-Y 447
+ P + Y+ G I +++ + D G TK + +
Sbjct: 668 -----LKNPSLQYVTVSGQEFMI-----------EIKNSAVSCIPTDWVKVGSTKAVSRF 711
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
H+P E L + +++ A D + + L KAV+ A +DC SLA V
Sbjct: 712 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSAHYHSLCKAVHHLATVDCIFSLAKV 771
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYS 563
A Q +Y RP L E + I+NGRH + ++ + D ++PN T + D R+ IITGPN
Sbjct: 772 AKQGDYCRPSLQEERKIVIKNGRHPVIDVLLGEQDQYVPNSTNLSGDSERVMIITGPNMG 831
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS YIKQVALI ++ IGS+VPA+ AT+G+ D + ++ QS+FM +L
Sbjct: 832 GKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELMDTA 891
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC 675
++RQATSQSL +LDE G+GT T DGI + T+ +F+ DV L TH +
Sbjct: 892 EIIRQATSQSLVILDELGRGTSTHDGIAIAYATLEHFIR-DVKSLTLFVTHYPPVCE--- 947
Query: 676 LPKS--ERLKFYTMSVLRPENNSTD------VEDIV-FLYRLVPGHALLSYGLHCALLAG 726
L KS + + Y M L E+ + + V D V FLY++ G A SYGL+ A LA
Sbjct: 948 LEKSYLQEVGNYHMGFLVNEDENKEDPGEEPVPDFVTFLYQITRGIAARSYGLNVAKLAD 1007
Query: 727 VPAEVIKRAA 736
VP E++K+AA
Sbjct: 1008 VPGEILKKAA 1017
>gi|311745087|ref|ZP_07718872.1| DNA mismatch repair protein MutS [Algoriphagus sp. PR1]
gi|126577600|gb|EAZ81820.1| DNA mismatch repair protein MutS [Algoriphagus sp. PR1]
Length = 868
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 166/647 (25%), Positives = 306/647 (47%), Gaps = 86/647 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ ++ K++ LD L++ +P H G G + ++++ VTPMG R
Sbjct: 255 ISAISRIAEEKYVWLDKFTIRNLELV----YPQHEG------GVPLIQILDQTVTPMGSR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF----NSP 276
+++ W + P+ + + RLN + FF + L+ + LK++ D+ ++ K +P
Sbjct: 305 MMKKWMVLPLKEKTAIEERLNVVDFFYQNSTLIEEIVSELKHIGDLERLISKVVVGRANP 364
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
I + LK+I + + K + + L +QL L + ++EK I EL
Sbjct: 365 REI---NQIKKALKAIIPIKEMLKGQDNPTLKRLSDQLNLCEY-LLEK----IENELKED 416
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
++ G ++++G DELDE R + +FL ++ E+ K
Sbjct: 417 APMLTH-----------QGGIIKDGVDDELDEYRNLANSGKDFLVQLQQREV-------K 458
Query: 397 EMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
+ I + GY + + D E ++ ++ Y TP+ +E
Sbjct: 459 NTGITSLKIAFNKVFGYYLEVTHAHKDKVPQEWIRKQTLVNAER--------YITPELKE 510
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
+ + + +++ +E+ +LV + + + +D LS A +A N+Y
Sbjct: 511 YEEKILNAEERLVGLEQKYFLELVQEAAKYVTQIQQNARIIGTMDVLLSFAQIALTNDYS 570
Query: 515 RPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIYIK 570
RP ++ L+ ++GRH + E + + ++PND +D+D + I IITGPN +GKS ++
Sbjct: 571 RPKISDTETLEYKDGRHPVIERQLSPGENYVPNDVYLDHDSQQIMIITGPNMAGKSALLR 630
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q ALIV ++ +GSFVPA A VG+ D S +++ +S+FM+++ + +L +
Sbjct: 631 QTALIVLMAQMGSFVPASFARVGIIDKVFTRVGASDNLSKGESTFMVEMTETASILNNLS 690
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTEL--LNEGCLPKS 679
S+SL L+DE G+GT T DGI + + Y K L TH EL L E PK
Sbjct: 691 SRSLVLMDEIGRGTSTYDGISIAWSIVEYLHNHTTFKAKTLFATHYHELNQLTED-FPK- 748
Query: 680 ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+K + +SV N ++F+ +L PG + S+G+H A +AG+P V+ RAA ++
Sbjct: 749 --IKNFNVSVKEVGNK------VIFMRKLKPGGSEHSFGIHVAQMAGMPNPVVLRAAEIM 800
Query: 740 ----------EAAQNNKHVERWSHE-NISAQDQQYKNAVEKMLAFDV 775
E +N K + + +++ ++ D ++K A E + D+
Sbjct: 801 AHLEKDKALNEQKENFKEIPKNNYQMSLFEMDPKFKEAKELIEEIDI 847
>gi|345004243|ref|YP_004807096.1| DNA mismatch repair protein mutS [halophilic archaeon DL31]
gi|344319869|gb|AEN04723.1| DNA mismatch repair protein mutS [halophilic archaeon DL31]
Length = 896
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 278/604 (46%), Gaps = 60/604 (9%)
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
L LDAT L++ +T M G + S+F ++ + GRRLLR W RP D
Sbjct: 259 LNLDATTQRNLELVET------MQGGASG---SLFDTVDATASSPGRRLLREWLTRPRRD 309
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
E L+ R +A+ + + L ETL V D+ + K S S A D + +++
Sbjct: 310 REELSRRHDAVGALASAALVREQLRETLSAVYDLERLASKATSGS--ADAGDLLSVKQTL 367
Query: 293 CSLLHVNK-IFEVGISES-LREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
+L + + I + +++S L L N +AA+ + EL + + K
Sbjct: 368 ATLPALEEAIADTPLADSPLAAVLARPN----REAAAGLRAELESA-------LREDPPK 416
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQ 408
G + R G+ ELD+L + +E L + + +A E + L H+ + YI Q
Sbjct: 417 TVTQGGIFRAGYDAELDDLVERHEALEGYFDSLADREKQEHALSHVSVDRNTTDGYYI-Q 475
Query: 409 IGYLMC--IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
+G + + E+ TL+ + F +D E +R ++R GD+ +++
Sbjct: 476 VGRSVADQVPEQYRHVKTLKNSKRF---VTDELEEKEREIMRVEESR------GDLEYEL 526
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
+DL + ++ L AE+D SLA A N++ RP LT L I
Sbjct: 527 F-------QDLRERVAADAELLQDVGRAVAEVDALASLAHHAANNDWTRPELTDGDTLRI 579
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+ GRH + E T + F+PND +D D R I+TGPN SGKS Y++Q ALI L+ GSFVP
Sbjct: 580 EAGRHPVVETTTE-FVPNDLYLDRDRRFLIVTGPNMSGKSTYMRQAALITLLAQAGSFVP 638
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A +GL D + +S+FM+++ ++ +L AT SL +LDE G+GT T
Sbjct: 639 ASSAEIGLVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTAT 698
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DGI + Y +V K L TH EL ++ L + + +
Sbjct: 699 YDGISIAWAATEYL-HNEVRAKTLFATHYHELTT-----LADHLDGVANVHIAVDGDPDA 752
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
D+ FL + G SYG+H A LAGVP V+ RA VL+ + K +E N
Sbjct: 753 ERDVTFLRTVRDGPTDRSYGIHVADLAGVPRPVVDRADDVLDKLREEKAIEARGPGNAGG 812
Query: 759 QDQQ 762
+Q
Sbjct: 813 ASKQ 816
>gi|325680315|ref|ZP_08159875.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
gi|324108024|gb|EGC02280.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
Length = 871
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 283/579 (48%), Gaps = 66/579 (11%)
Query: 178 TAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
TA L++ +T ++ G S+ +++ T MG R+L++W +P+++ +
Sbjct: 282 TARRNLELTETLRNKQKKG--------SLLWVISNTKTSMGNRMLKSWLEQPLINPAKII 333
Query: 238 SRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL-L 296
RLNA+ + + + E L V D+ ++ + S A + I SL L
Sbjct: 334 DRLNAVEQLVRDPVALGEIKEVLGGVYDLERLMTRVMYKS---------ASPRDIKSLSL 384
Query: 297 HVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGT 356
K+ L++QL + +++ I+T A + ++D + K G
Sbjct: 385 TALKL------PDLKKQLSAFDGKLLKDCNRRISTLDAISNLVENALVDEPPANVKD-GG 437
Query: 357 LVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIF 416
++R+GF ++LD LR I ++++A E + + I Y GY + +
Sbjct: 438 VIRDGFNEQLDGLRNIISGGKGIIDDIAEREKEKTG-----IKTLKIGYNRVFGYYIEVT 492
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI--- 473
+ D L + +R K E + +LG KIL +E+ I
Sbjct: 493 KSYYD------LIPDNYIRKQTLTNCERFITDELKVAE-NTILG-ASDKILSLEQEIFTE 544
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
RD ++ AV AE+D S A A +NNY +P + ++ +++I+NGRH +
Sbjct: 545 VRDFIATQLRIVQDTATAV---AEVDVLCSYATAAIKNNYTKPEIAIDGIINIKNGRHPV 601
Query: 534 QEM--TVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
E+ T + F+PNDT +D R+++ITGPN SGKS Y++QVALI ++ IG FVPAD A
Sbjct: 602 VELMQTDEVFVPNDTYLDLGSNRMSVITGPNMSGKSTYMRQVALITLMAQIGCFVPADYA 661
Query: 591 TVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+ + D S +TA QS+FM+++ +V +++ AT SL +LDE G+GT T DGI
Sbjct: 662 KISVVDQIFTRIGASDDLTAGQSTFMVEMSEVADIVKHATKDSLVILDEVGRGTSTFDGI 721
Query: 643 GLLGGTINYFVTC-DVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVE 700
+ Y T + K L TH EL++ E L +K Y+++V R +N
Sbjct: 722 AIARSVSEYISTSRSLGCKTLFATHYHELISLEDELTG---VKNYSVAVKRQGDN----- 773
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
I FL ++VPG A SYG+ A LAG+P+++I RA +L
Sbjct: 774 -IKFLRKIVPGGADESYGIEVAKLAGLPSKIIGRAKSLL 811
>gi|262038162|ref|ZP_06011559.1| DNA mismatch repair protein MutS [Leptotrichia goodfellowii F0264]
gi|261747810|gb|EEY35252.1| DNA mismatch repair protein MutS [Leptotrichia goodfellowii F0264]
Length = 614
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 273/562 (48%), Gaps = 67/562 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ +++KC + MG RLL+ + P+LD+E + R N + +F+ + + L E L+ +
Sbjct: 27 SLLWVLDKCKSSMGTRLLKRYINNPLLDIEEITKRQNDVQYFIDNILVREDLKEKLENIY 86
Query: 265 DIPHILKK--FNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
D+ +L K F S + D TA ++ + + + +I L++ + +I
Sbjct: 87 DLERLLGKVIFGSEN----GKDLTALKNTVKASIEIIQI--------LKDTSFFNDINI- 133
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
L +Y L+ ID N G +++ G+ ELDE+ +I +FL E
Sbjct: 134 --------NVLIGIYRLIDESIDENAPFTVREGNIIKRGYNAELDEIYKIMNSGKDFLLE 185
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD---DTTLEQLQGFEFAFSDMD 439
+ E + K M I Y GY + + + LD DT + + Q
Sbjct: 186 IEKKE--KEATGIKNM---KIKYNKVFGYFIEVTKSNLDMVPDTYIRK-QTL-------- 231
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
T + TP+ ++ ++ + + KI DME + +++ + + L+K A LD
Sbjct: 232 --TNAERFVTPELKKYEDTIINSKAKIEDMEYYLFKEVSTKVKECKTDLVKLAEKLAYLD 289
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDNDGRINII 557
+S + VA +N+Y+RP +T + +DI++GRH + E + F+ NDT + R ++
Sbjct: 290 VIVSFSTVAIENDYIRPEITNDFSIDIKDGRHPVVEKLIGRSDFVSNDTLLTEKERFTVL 349
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN SGKS Y+KQVALI ++ GS+VPA +A + + D S + QS+FM+
Sbjct: 350 TGPNMSGKSTYMKQVALISIMAQTGSYVPASSAKLSVVDKYLTRIGASDDILTGQSTFMV 409
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH--- 666
++ +V ++ AT +SL +LDE G+GT T DG+ + I+ ++ + K + TH
Sbjct: 410 EMSEVSNIINNATERSLIILDEVGRGTSTFDGVS-IATAISEYIHEKIKAKTIFATHYHE 468
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
LTEL N + E + Y + V ++FL +V G A SYG+ A AG
Sbjct: 469 LTELEN-----RYENIVNYRIEVEEKAGK------VMFLRNIVKGGADKSYGIEVAKFAG 517
Query: 727 VPAEVIKRAAYVLEAAQNNKHV 748
+P E++ + +L + K +
Sbjct: 518 LPKEILHESKKILHRLEQKKEL 539
>gi|403253346|ref|ZP_10919647.1| DNA mismatch repair protein MutS [Thermotoga sp. EMP]
gi|402810880|gb|EJX25368.1| DNA mismatch repair protein MutS [Thermotoga sp. EMP]
Length = 793
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 156/602 (25%), Positives = 281/602 (46%), Gaps = 67/602 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S ++ LD+ E L + D+ G ++F ++N T MG RLL+ W
Sbjct: 244 ISQRDYMILDSATVENLSLIPGDR------------GKNLFDVLNNTETSMGARLLKKWI 291
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
L P++D + + RL A+ + + + L V+D+ I+ + + D
Sbjct: 292 LHPLVDRKQIEERLEAVERLVNDRVSLEEMRNLLSNVRDVERIVSRVEYNRSV--PRDLV 349
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +++ + +N++ L F + +K A + +L+ I+
Sbjct: 350 ALRETLEIIPKLNEV--------------LSTFGVFKKLAFP-----EGLVDLLRKAIED 390
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+ G G +++ GF ELDE R + E E L+E E + +++ V Y
Sbjct: 391 DPVGNPGEGKVIKRGFSPELDEYRDLLEHAEERLKEFEEKERKRTG--IQKLRVG---YN 445
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + LD +E + ++ E + TP+ +E + + +I
Sbjct: 446 QVFGYYIEVTKANLDKIP----DDYERKQTLVNSER----FITPELKEFETKIMAAKERI 497
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
++E+ + +++ + + LLK A++D +LA A NY +P+ + E L+I
Sbjct: 498 EELEKELFKNVCEEMKKHKEVLLKISEELAKIDVLSTLAYDAILYNYTKPVFS-EDRLEI 556
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+ GRH + E F+ ND +DN+ R +ITGPN SGKS +I+QV LI ++ +GSFVP
Sbjct: 557 KGGRHPVVERFTQNFVENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQMGSFVP 616
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A + + D + +S+F+++++++ ++L ++T +SL LLDE G+GT T
Sbjct: 617 AQKAVLPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTKKSLVLLDEVGRGTST 676
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
+DG+ + + KVL TH TEL E P+ + ++L E
Sbjct: 677 QDGVSIAWAISEELIKRGC--KVLFATHFTELTELEKHFPQVQ-----NKTILVKEEG-- 727
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
++++F +++V G A SYG+ A +AG+P VI RA +LE N + S
Sbjct: 728 --KNVIFTHKVVDGVADRSYGIEVAKIAGIPERVINRAYEILERNFKNNTKKNGKSNRFS 785
Query: 758 AQ 759
Q
Sbjct: 786 QQ 787
>gi|94501246|ref|ZP_01307768.1| DNA mismatch repair protein MutS [Bermanella marisrubri]
gi|94426673|gb|EAT11659.1| DNA mismatch repair protein MutS [Oceanobacter sp. RED65]
Length = 895
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 256/544 (47%), Gaps = 53/544 (9%)
Query: 204 FSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYV 263
F++ ++++ T MG RLLR W RP+ L R +AI + + +H LK +
Sbjct: 302 FTLAWVLDRTATAMGSRLLRRWLNRPLRQQSVLKERQHAIGAMIETHGY-EDIHNVLKQI 360
Query: 264 KDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVE 323
DI IL S + S L + L V + IS+ + L I
Sbjct: 361 GDIERIL------SRVALRSARPRDLARLRDALAVLPQLQNAISDVDAAPIAALGQRIST 414
Query: 324 KAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV 383
+ T A V + I D G ++ EGF +ELDELR I E +FL ++
Sbjct: 415 YPETVETLTNAVVENPPVVIRD---------GGVIAEGFDEELDELRGISENAGQFLIDI 465
Query: 384 ASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK 443
+ E + + + Y GY + I + + + E ++ ++
Sbjct: 466 ETREREK-----TGISTLKVGYNRVHGYYIEISKAQAGEAPTEYIRRQTLKNAER----- 515
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA---ELDC 500
+ TP+ +E ++ + L E+A+ +L+ + D L + AA ELD
Sbjct: 516 ---FITPELKEFEDKALSSKSRALSREKALYEELIESLA---DQLAALQDTAAAISELDV 569
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV-DTFIPNDTRIDNDGRINIITG 559
+LA A Y+RP LT +DIQ GRH + E + D F+ ND R D + ++ +ITG
Sbjct: 570 LSNLAERAVTQRYVRPELTENAGIDIQQGRHPVVEAVIEDPFVANDVRFDQNRKMLVITG 629
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDL 611
PN GKS Y++Q A I L+HIGS+VPAD+AT+GL D S + +S+FM+++
Sbjct: 630 PNMGGKSTYMRQAAHIALLAHIGSYVPADSATIGLLDRIFTRMGSSDDVAGGRSTFMVEM 689
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELL 671
+ +L AT+QSL L+DE G+GT T DG+ L + Y + L TH E+
Sbjct: 690 TETANILHHATAQSLVLMDEVGRGTSTFDGLSLAWASAEYL-SKHTQAYTLFATHYFEMT 748
Query: 672 NEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEV 731
+ S+ + ++ E+N + IVFL+ + G A SYGL A LAGVP EV
Sbjct: 749 Q--LVESSDNVANVHLTAT--EHN----DHIVFLHHVEEGPASQSYGLQVAKLAGVPLEV 800
Query: 732 IKRA 735
+++A
Sbjct: 801 VEQA 804
>gi|376295257|ref|YP_005166487.1| DNA mismatch repair protein MutS [Desulfovibrio desulfuricans
ND132]
gi|323457818|gb|EGB13683.1| DNA mismatch repair protein MutS [Desulfovibrio desulfuricans
ND132]
Length = 868
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 188/670 (28%), Positives = 306/670 (45%), Gaps = 88/670 (13%)
Query: 118 LNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDA 177
L+S+ G VRA G LL L D ++ E G+ + ++L K L LD
Sbjct: 214 LDSLGLQGKNELVRACGALLTYL------DQTQKGEFGH----LGEFRPLNLGKHLLLDE 263
Query: 178 TAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLN 237
L+IF+ GR+ G +++ +M++ +TPMG RLL +P +L +
Sbjct: 264 VTERNLEIFRRLD-------GRSGPG-TLWQVMDRTMTPMGGRLLEARLRQPWRNLAPIE 315
Query: 238 SRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSL 295
++F + L + L V D L++ ++ F+ A+ D+ A +S+ L
Sbjct: 316 KTQECVAFLFERDRLRGDVRHALDSVYD----LERLSTRIFLGRANPKDFIALRRSLSML 371
Query: 296 LHVNKIFEVGISESLREQLRLL-NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
++ + + + R+L +D ++ + + L VI
Sbjct: 372 PRLHSLLAGEDLDPAPDLKRILAKWDAMDDLCALLDKALVDTPPPVIT-----------D 420
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQI--G 410
G L R+GF LDEL ++ E + L+ + EL + +P L K F Y ++
Sbjct: 421 GGLFRKGFDPVLDELIELNEHGEDRLKALHRAELAKNDIPKL-KLGFNKVFGYFFEVSKA 479
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + + + TL ++ E Y TP+ +EL++ + + +E
Sbjct: 480 YKGQVPDHFIRRQTL------------VNSER----YITPELKELEDKIISASEERKSLE 523
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ ++L H+ L + A LD + LA A N + RP+L ++I+ GR
Sbjct: 524 YKLFQELREHLAKARSRFLFMADAIASLDYWQGLAEAARVNEWTRPVLHDGLEIEIEQGR 583
Query: 531 HVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
H + E M +IP D R+D RI +ITGPN +GKS ++QVA++ ++ IGSFVPA
Sbjct: 584 HPVVEAAMGAANYIPGDLRMDQGRRILLITGPNMAGKSTVLRQVAIMTIMAQIGSFVPAR 643
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A +GL D S ++ S+FM+++ + +LRQA +SL +LDE G+GT T D
Sbjct: 644 SARIGLADRVFSRVGASDNLAQGHSTFMVEMTETARILRQAGKRSLVILDEIGRGTSTYD 703
Query: 641 GIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDV 699
G+ L + T + L TH EL G K + L+ ++V +
Sbjct: 704 GLSLAWAVVEELSTRAGGSVRTLFATHYHELT--GLEGKIDGLRNLNIAVKEWKG----- 756
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQ 759
DIVFL RLVPG A SYG+ A LAGVP V++RA +L + +Q
Sbjct: 757 -DIVFLRRLVPGPADRSYGIEVARLAGVPRPVVERAREILAELEEK------------SQ 803
Query: 760 DQQYKNAVEK 769
D Q K AV++
Sbjct: 804 DNQAKGAVDR 813
>gi|440753740|ref|ZP_20932942.1| DNA mismatch repair protein MutS [Microcystis aeruginosa TAIHU98]
gi|440173946|gb|ELP53315.1| DNA mismatch repair protein MutS [Microcystis aeruginosa TAIHU98]
Length = 626
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 177/650 (27%), Positives = 294/650 (45%), Gaps = 79/650 (12%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
+ S+ MG E + +RA+GGLL +E+ + + + + + S+++FL
Sbjct: 1 MRSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLI 50
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 51 LDGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSR 102
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ +R + I + L + + L+ + DI + + + + A D + S+
Sbjct: 103 GIRARQDTIQELKDNPSLRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVK 160
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + + G S L KA I +L + + VI + +
Sbjct: 161 LADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKE 207
Query: 355 GTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYL 412
G ++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY
Sbjct: 208 GGVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYY 260
Query: 413 MCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERA 472
+ + K D E ++ + Y T + +E +N++ ++ ++E
Sbjct: 261 ISLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNNLEYE 312
Query: 473 ITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH- 531
I DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 313 IFSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHP 372
Query: 532 -VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFV
Sbjct: 373 VVEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFV 432
Query: 586 PADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT
Sbjct: 433 PAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTA 492
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 493 TFDGLSIAWAVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH--- 546
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 547 ---EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 591
>gi|149174706|ref|ZP_01853331.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
gi|148846400|gb|EDL60738.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
Length = 866
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 272/583 (46%), Gaps = 67/583 (11%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
I K S+ ++++ VT MG RLL +W P+ L + RL+A+ + L +
Sbjct: 282 IREGKREGSLISVLDETVTSMGARLLTDWIANPLTSLSQIERRLDAVEELSQNPVLCTEV 341
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
E L D+ + + + +A D + FL +LL K G L + L
Sbjct: 342 REQLAKTYDLQRLTARIATGR--ASARDLS-FLAQTLALLPKLKAKLSGRKAELLQSLEA 398
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
+ D+ + S I T + L + G ++R GF +ELDELR + +
Sbjct: 399 -DIDLCAEVRSDIETMIIEDPPLTLN-----------EGGVIRPGFSEELDELRSLSKGG 446
Query: 377 PEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGF 431
E++ + E + +P+L + Y GY + + K+ D + +
Sbjct: 447 KEWIAGYRNEESERIGIPNLK-------VGYNKVFGYYLEVSAAHAAKVPDHYIRK---- 495
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
+ + + Y TP+ +E + + + +++E+++ +L + + K
Sbjct: 496 ----QTLKNQER---YITPELKEYEEKVLKAEDRAVELEQSMFDELRERVAKEAPRTQKT 548
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTVD-TFIPNDTRID 549
A++D LA +A Y RP +T EP+LDI+ RH VL + F+PND +
Sbjct: 549 AEILAQIDVLFGLAHLATHAGYTRPEMTEEPVLDIRESRHPVLDRLQPSGEFVPNDVLLG 608
Query: 550 ND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHM 600
GR+ IITGPN +GKS YI+Q AL+ ++ IGSF+PA A +G+ D S +
Sbjct: 609 EPYGRVQIITGPNMAGKSTYIRQAALLTLMAQIGSFIPASEARIGIADRIFARVGASDEL 668
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPK 660
+ QS+FM+++ + +L A+ +SL +LDE G+GT T DGI L ++ F+ + +
Sbjct: 669 SKGQSTFMVEMTEAARILNSASERSLVILDEIGRGTSTYDGIS-LAWSMTEFLHDKIKAR 727
Query: 661 VLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVE----DIVFLYRLVPGHALLS 716
L TH EL T ++ + N + V +IVFL+++V G A S
Sbjct: 728 TLFATHYHELTE------------LTQTLKQASNWNVAVHEQDGEIVFLHKIVEGSANKS 775
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQ 759
YG+H A LAG+P +VI+RA +L + + H++ I +
Sbjct: 776 YGIHVARLAGIPDQVIQRANQILSTLEKD-HIDETGQTTIPPR 817
>gi|363897251|ref|ZP_09323790.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
gi|361958748|gb|EHL12045.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
Length = 902
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 292/626 (46%), Gaps = 84/626 (13%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D+ + L++++T + G ++ +++ T MG R+LR++ RP+
Sbjct: 267 YMIVDSYSQRNLELWETLREKKKRG--------TLLWVLDYTKTAMGSRMLRHFLERPLR 318
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + + +RL+A+ F M L E L + DI +L + + + A D A S
Sbjct: 319 DKKKIEARLDAVEEFTGHYIDMEELREYLDSIYDIERLLARISLST--ANARDLLALKLS 376
Query: 292 ICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+ L + K F+ + + E++ L DI K I E +
Sbjct: 377 LQYLPDIKKALSPFQSSLLSKMGEEMDSLE-DIYRKIEEEIVEEPPLSVK---------- 425
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-----LVQLPHLCKEMFVPCI 403
G L++ F ++++ R E+L+E+ + E + L +F C
Sbjct: 426 -----EGGLIKASFSKDVEDYRNAGVNGKEWLQELEARERDKTGIKNLKIKYNRIFGYC- 479
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
+ Y I + + TL Q GE Y T + EL N +
Sbjct: 480 -FEVSKAYQGEIPDYFIRRQTLAQ------------GER----YITTELEELQNRILGAE 522
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K+ D+E A+ L I + K A LD +LSLA +A + NY+RP L+
Sbjct: 523 EKLKDLEYALFCTLREEIAEELPRIQKTARELAHLDAYLSLAKLAIKENYVRPRLSEGGS 582
Query: 524 LDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
L I+ GRH + E ++ FIPNDT ++ + I IITGPN +GKS Y++QVALIV LS I
Sbjct: 583 LFIKEGRHPVVEKLLEEEHFIPNDTSLEENQEIAIITGPNMAGKSTYMRQVALIVLLSAI 642
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA A + + D S + QS+FM+++ +V +LR AT QSL +LDE G
Sbjct: 643 GSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATKQSLLILDEIG 702
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
+GT T DG+ + + Y + + K L TH EL EG L +K Y ++V +
Sbjct: 703 RGTSTFDGLSIAWAVVEY-IARHIQAKTLFATHYHELTELEGKL---NNVKNYCIAVSKK 758
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL------EAAQNNK 746
+ +I FL +++PG A SYG+ A LAGVP V+ RA + + Q NK
Sbjct: 759 DG------EISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAFLSDNDFMQENK 812
Query: 747 HVERW-----SHENISAQDQQYKNAV 767
++ + +N+ +Q++Q KN
Sbjct: 813 NIVAKEGGLETDDNLESQEKQTKNGA 838
>gi|404486904|ref|ZP_11022092.1| DNA mismatch repair protein mutS [Barnesiella intestinihominis YIT
11860]
gi|404335958|gb|EJZ62424.1| DNA mismatch repair protein mutS [Barnesiella intestinihominis YIT
11860]
Length = 871
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 166/605 (27%), Positives = 286/605 (47%), Gaps = 83/605 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++++LD +L++ P + G G S+ ++++ VTPMG R
Sbjct: 254 ITSLSRIEEERYVRLDKFTVRSLELLS----PMNEG------GKSLLDVIDRTVTPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+L+ W + P+ D++ + RLN + FF E+ + L + D+ ++ K SP
Sbjct: 304 MLKRWVVFPLKDVKPIEDRLNGVEFFFRHPEVREVIDPQLDTIGDMERLISKVAVGRISP 363
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF--DIVEKAASCITT 331
+ A +K++C + +G EQL D +E +
Sbjct: 364 REVVQLKVALSAIEPIKAVCEQSDEPVLQRIG------EQLNCCTIIRDRIEHEINPDAP 417
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
L VNR G ++R+G DELDELR+I ++L V E
Sbjct: 418 NL------------VNR------GGIIRKGVNDELDELREISYSGKDYLLHVQQRE---- 455
Query: 392 PHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHT 449
++ +P I Y + GY + + D + ++ ++ Y T
Sbjct: 456 ---SEKTGIPSLKIGYNNVFGYYIEVRNTHKDKVPSDWIRKQTLVSAER--------YIT 504
Query: 450 PKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAH 509
+ +E + + KIL +E + DL+ + + + N A LDC LS A
Sbjct: 505 QELKEYEEKILGAEEKILSLETQLFNDLILALTEYIPAIQLDSNLIARLDCLLSFVKSAV 564
Query: 510 QNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGK 565
+N Y+RP + ++DI+ GRH + E + + +I N +DND + I +ITGPN +GK
Sbjct: 565 ENRYIRPEVNDSLVIDIKEGRHPVIEKQLPPGEPYISNSVELDNDKQQIMMITGPNMAGK 624
Query: 566 SIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMM 617
S ++Q ALIV ++ IGSFVP++AA +G+ D S +++ +S+FM+++ + +
Sbjct: 625 SALLRQTALIVLMAQIGSFVPSEAAKIGIVDKIFTRVGASDNISLGESTFMVEMTEAADI 684
Query: 618 LRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCL 676
L + +SL L DE G+GT T DGI + + + K L TH E LNE +
Sbjct: 685 LNNLSERSLVLFDELGRGTSTYDGISIAWAIVEHIHEHPKARAKTLFATHYHE-LNE--M 741
Query: 677 PKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
++ +R+ Y +SV +N ++FL +LV G + S+G+H A LAG+P ++KRA
Sbjct: 742 ERTYKRIVNYNVSVKEVDNK------VIFLRKLVRGGSEHSFGIHVAKLAGMPQSIVKRA 795
Query: 736 AYVLE 740
+L+
Sbjct: 796 NQILK 800
>gi|256844548|ref|ZP_05550034.1| DNA mismatch repair protein MutS [Lactobacillus crispatus
125-2-CHN]
gi|256849063|ref|ZP_05554496.1| DNA mismatch repair protein mutS [Lactobacillus crispatus MV-1A-US]
gi|262047545|ref|ZP_06020500.1| DNA mismatch repair protein MutS [Lactobacillus crispatus MV-3A-US]
gi|256613626|gb|EEU18829.1| DNA mismatch repair protein MutS [Lactobacillus crispatus
125-2-CHN]
gi|256713839|gb|EEU28827.1| DNA mismatch repair protein mutS [Lactobacillus crispatus MV-1A-US]
gi|260572121|gb|EEX28686.1| DNA mismatch repair protein MutS [Lactobacillus crispatus MV-3A-US]
Length = 857
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 241 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 292
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 293 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 337
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 338 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 390
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 391 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 446
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 447 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 496
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 497 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 556
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 557 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 616
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 617 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 676
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 677 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 729
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 730 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 779
>gi|323691987|ref|ZP_08106235.1| DNA mismatch repair protein MutS [Clostridium symbiosum WAL-14673]
gi|323503910|gb|EGB19724.1| DNA mismatch repair protein MutS [Clostridium symbiosum WAL-14673]
Length = 880
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 282/593 (47%), Gaps = 72/593 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +F+ LD + L++ +T + G ++ +++K T MG R+LR++
Sbjct: 256 TTGQFMMLDTSTRRNLELIETLREKQKRG--------TLLWVLDKTKTAMGARMLRSFVE 307
Query: 228 RPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P++ E + R NAI ++ EE+ E L + D+ +L + + +
Sbjct: 308 QPLIHKEEILKRQNAIEELNMNYISREEIC----EYLNPIYDLERLLGRISYKT--ANPR 361
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
D +F S+ L H+ I + SE L E L D +E I + A + + + +
Sbjct: 362 DLISFRNSLEMLPHIKHILKEFRSELLTEIEGQL--DPLEDLKKLI--DEAIIDDPPVSV 417
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G ++++GF +E D LR E +L EL Q + I
Sbjct: 418 RD---------GGIIKDGFHEEADRLRHAKTEGKTWL-----AELEQKEKESTGIKNLKI 463
Query: 404 VYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + F++ + D F T Y T + +EL++++
Sbjct: 464 KYNKVFGYYFEVTNSFKDLVPD-----------YFIRKQTLTNAERYTTDRLKELEDVIM 512
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E + + I + + + A D SL++VA +NNY++P +
Sbjct: 513 GAEDKLFSLEYELFCQVRDGIAAEVKRIQETAHAVALTDVLTSLSVVAVRNNYVKPSINE 572
Query: 521 EPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ ++ I+NGRH V Q M+ F+ NDT +DN R++IITGPN +GKS Y++Q ALI
Sbjct: 573 KGIIHIKNGRHPVVEQMMSGGMFVANDTYLDNGKNRVSIITGPNMAGKSTYMRQTALITL 632
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD A +GL D S + + QS+FM+++ +V +LR AT SL +L
Sbjct: 633 MAQVGSFVPADEADIGLCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRSSLLIL 692
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + Y + K L TH EL EG + + Y +
Sbjct: 693 DEIGRGTSTFDGLSIAWAVVEYISNTKLLGAKTLFATHYHELTELEGTMSG---VNNYCI 749
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+V +DIVFL ++V G A SYG+ A LAGVP VI+RA ++E
Sbjct: 750 AV------KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPELVIERAKELVE 796
>gi|312977892|ref|ZP_07789638.1| DNA mismatch repair protein MutS [Lactobacillus crispatus CTV-05]
gi|310895199|gb|EFQ44267.1| DNA mismatch repair protein MutS [Lactobacillus crispatus CTV-05]
Length = 857
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 241 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 292
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 293 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 337
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 338 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 390
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 391 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 446
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 447 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 496
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 497 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 556
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 557 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 616
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 617 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 676
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 677 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 729
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 730 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 779
>gi|383621870|ref|ZP_09948276.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
gi|448702798|ref|ZP_21700155.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
gi|445776891|gb|EMA27867.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
Length = 964
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/646 (26%), Positives = 305/646 (47%), Gaps = 72/646 (11%)
Query: 124 MGSEVQVRASGGLLAVLENERIV--DTLEQKESGNASITIDSVIEVSL---NKFLKLDAT 178
+ S+ ++RA G LL E R D + + G ++ + ++ ++L LDA
Sbjct: 260 LASDPEIRACGALLEYAEYARGSERDAEAKADDGGEDDRLEYLTHLTRYDPREYLLLDAV 319
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
A +L++F+ P + R ++ ++ G++++ + +G R LR+W RP+L+ + + +
Sbjct: 320 ALRSLELFE----PRAV---RGRDEATLVGVLDETASALGGRKLRDWLRRPLLEPDRIEA 372
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHV 298
RL+A+ L E L+ V D+ ++ + + A D L+S+ L V
Sbjct: 373 RLDAVEELKSGVRTREELQELLRDVYDLERLIGRISRER--ANARD----LRSLRDTLAV 426
Query: 299 NKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLV 358
+ ++ ++LR L+ LA V L+ I + E G ++
Sbjct: 427 VPDIRAELEDADCDRLRRLH---------AALDPLADVRGLIEDAIVADPPIEITEGGII 477
Query: 359 REGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
EG+ +LD+LR+ + +++++ LE + + +H GY + +
Sbjct: 478 AEGYDGDLDDLRRTARDGKQWIDD---LEERERERTGIDSLKVGYNSVH--GYYIEVTNP 532
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
LD + + S+ + TP+ +E ++ + + ++E + RD+
Sbjct: 533 NLDSVPDDYQRRQTLKNSER--------FVTPELKEREDEIVGAEERADELEYELFRDVR 584
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL--------LDIQNGR 530
+ + + + A LD +SLA VA Q +Y RP TLE +DI+ GR
Sbjct: 585 RTVADEVERVQDLADALATLDALVSLATVAAQYDYCRP-ETLEHERTEDGGLEIDIEGGR 643
Query: 531 HVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
H + E T ++F+PND + D R+ +ITGPN SGKS Y++QVA IV L+ +GSFVPA +A
Sbjct: 644 HPVVERTQESFVPNDAHLTEDRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPAKSA 703
Query: 591 TVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+ D S + +S+FM+++ ++ +LR+A +SL LLDE G+GT T DG+
Sbjct: 704 RLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREADERSLVLLDEVGRGTSTADGM 763
Query: 643 GLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDV 699
+ + V L TH LTE+ + L + L F E + D
Sbjct: 764 AIAQAITEHLHDA-VGATTLFATHHHPLTEVAD--VLEDAFTLHF--------EVDQEDG 812
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
E +VF + + PG A SYG+ A AGVP V++R+ ++ A+
Sbjct: 813 E-VVFRHEVAPGAATGSYGVEVATAAGVPESVVERSRELVAEAETE 857
>gi|355628056|ref|ZP_09049571.1| DNA mismatch repair protein mutS [Clostridium sp. 7_3_54FAA]
gi|354819949|gb|EHF04381.1| DNA mismatch repair protein mutS [Clostridium sp. 7_3_54FAA]
Length = 886
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 282/593 (47%), Gaps = 72/593 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +F+ LD + L++ +T + G ++ +++K T MG R+LR++
Sbjct: 262 TTGQFMMLDTSTRRNLELIETLREKQKRG--------TLLWVLDKTKTAMGARMLRSFVE 313
Query: 228 RPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P++ E + R NAI ++ EE+ E L + D+ +L + + +
Sbjct: 314 QPLIHKEEILKRQNAIEELNMNYISREEIC----EYLNPIYDLERLLGRISYKT--ANPR 367
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
D +F S+ L H+ I + SE L E L D +E I + A + + + +
Sbjct: 368 DLISFRNSLEMLPHIKHILKEFRSELLTEIEGQL--DPLEDLKKLI--DEAIIDDPPVSV 423
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G ++++GF +E D LR E +L EL Q + I
Sbjct: 424 RD---------GGIIKDGFHEEADRLRHAKTEGKTWL-----AELEQKEKESTGIKNLKI 469
Query: 404 VYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + F++ + D F T Y T + +EL++++
Sbjct: 470 KYNKVFGYYFEVTNSFKDLVPD-----------YFIRKQTLTNAERYTTDRLKELEDVIM 518
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E + + I + + + A D SL++VA +NNY++P +
Sbjct: 519 GAEDKLFSLEYELFCQVRDGIAAEVKRIQETAHAVALTDVLTSLSVVAVRNNYVKPSINE 578
Query: 521 EPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ ++ I+NGRH V Q M+ F+ NDT +DN R++IITGPN +GKS Y++Q ALI
Sbjct: 579 KGIIHIKNGRHPVVEQMMSGGMFVANDTYLDNGKNRVSIITGPNMAGKSTYMRQTALITL 638
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD A +GL D S + + QS+FM+++ +V +LR AT SL +L
Sbjct: 639 MAQVGSFVPADEADIGLCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRSSLLIL 698
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + Y + K L TH EL EG + + Y +
Sbjct: 699 DEIGRGTSTFDGLSIAWAVVEYISNTKLLGAKTLFATHYHELTELEGTMSG---VNNYCI 755
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+V +DIVFL ++V G A SYG+ A LAGVP VI+RA ++E
Sbjct: 756 AV------KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPELVIERAKELVE 802
>gi|418616725|ref|ZP_13179649.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU120]
gi|374820803|gb|EHR84879.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU120]
Length = 873
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 293/611 (47%), Gaps = 58/611 (9%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYGKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIF-EVGISESLR-EQLRLLNFDIVEKAASCITTELAYVYE 338
A D SI + H+ + E+G + + ++L L+ D+++ E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLD-DLLQ------ILEESLVEE 397
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
I I D G L + GF +LDE + + +L E+ + E + K +
Sbjct: 398 PPISIKD---------GGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTG--IKSL 446
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I + GY + I L++ Q + F + +R T + +E +++
Sbjct: 447 ---KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDI 498
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K +++E + L HI +++ L K +ELDC S A +A + NY++P
Sbjct: 499 ILGAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTF 558
Query: 519 TLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ + +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I
Sbjct: 559 SDDKVLHLENSRHPVVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIIS 618
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL +
Sbjct: 619 IMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLII 678
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 679 FDEIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAAN 737
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 738 EYQGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPS 788
Query: 749 ERWSHENISAQ 759
+ SHEN Q
Sbjct: 789 YQLSHENTDDQ 799
>gi|221635855|ref|YP_002523731.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157957|gb|ACM07075.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 881
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 283/615 (46%), Gaps = 80/615 (13%)
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGF 204
IV LE+ S+ EV + + LDA L++ ++ +G G +
Sbjct: 252 IVVYLERTNPALLSLLTSLRTEVPARR-VGLDAATRRNLELTRS------LGTGGTRG-- 302
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ G++++ VTPMG R LR P+ DL+ L R + + + EL + L L
Sbjct: 303 SLLGVLDRTVTPMGARTLRRLVSEPLRDLDELRRRQHIVGALRATPELRSRLGSILLAAG 362
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D+ + K S T D+ +++ + +E+LR L+ +++
Sbjct: 363 DLERLTSKIVQGS--ATIRDFATLRQALAT------------AEALRGALQASGEPALQR 408
Query: 325 AA----SCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
A SC ELA + E + E G +R GFC ELD + EE FL
Sbjct: 409 FADDFISC--PELAALLERAL--------IEDSDGPRLRPGFCPELDAVLAAVEETRRFL 458
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
A+LE + + Y GY + + L + ++ A +
Sbjct: 459 ---ATLEQRERERTGIRSL--KVGYNKVFGYYIEVTRPHLSRVPPDYVRKQTVATGER-- 511
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
+ TP+ ++ + L +I ++ERA L + ++ LL+ + A LD
Sbjct: 512 ------FITPELKDAEARLLAAEAEIAELERAALARLTREVTTRTNELLRLAGWIAWLDA 565
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDG-RINII 557
F SLA VA Q ++ P L + I+ GRH + E+ +D F+PND ++ DG R+ ++
Sbjct: 566 FRSLAEVAAQYDWSCPELDESDTILIEGGRHPVVEVLLDGQPFVPNDCQLGGDGPRLLLV 625
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMI 609
TGPN GKS Y++QVALIV L+ IGSFVPA A +GL D + QS+FM+
Sbjct: 626 TGPNMGGKSTYLRQVALIVLLAQIGSFVPAARARIGLVDRIFCRVGAHDDLPGGQSTFMV 685
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD----VPPKVLVCT 665
++ + +LRQAT +SL +LDE G+GT T+DG+ I + V D V + L T
Sbjct: 686 EMVETATILRQATQRSLVILDEVGRGTATQDGL-----AIAWAVLEDLHDRVGARTLFAT 740
Query: 666 HLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
H EL E LP + M E + +VFLYR+ PG A +YG+H A L
Sbjct: 741 HFLELTALEAELPGVANVHVAAM-----EQDGR----VVFLYRVRPGAADRAYGIHVARL 791
Query: 725 AGVPAEVIKRAAYVL 739
AG+P V RA +L
Sbjct: 792 AGLPPWVADRAERLL 806
>gi|255013135|ref|ZP_05285261.1| DNA mismatch repair protein MutS [Bacteroides sp. 2_1_7]
gi|410102598|ref|ZP_11297524.1| DNA mismatch repair protein mutS [Parabacteroides sp. D25]
gi|409238670|gb|EKN31461.1| DNA mismatch repair protein mutS [Parabacteroides sp. D25]
Length = 869
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 155/573 (27%), Positives = 276/573 (48%), Gaps = 55/573 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG S+ +++K ++PMG R+LR W L P+ D++ + R + +F E L L+
Sbjct: 283 EGTSLLDVIDKTISPMGSRMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLE 342
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ I+ K + + LK +L + I E ++ R I
Sbjct: 343 QIGDLERIISKV---AVGRVSPREVVQLK--VALRAIEPIKEACMASGEPSLCR-----I 392
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ +C A + + + I+ + G ++ +G +ELD+LR I ++L
Sbjct: 393 GEQLNAC-----ALIRDRIEKEINNDPPSLVNKGGIIAKGVNEELDDLRAIAYSGKDYLL 447
Query: 382 EVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
+V +EL +P L I + + GY + + D ++ ++
Sbjct: 448 KVQQREIELTGIPSLK-------IAFNNVFGYYIEVRNTHKDKVPANWIRKQTLVNAER- 499
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E + + K L +E + +LV + + + N +D
Sbjct: 500 -------YITEELKEYEEKILGAEEKSLALETRLFNELVLALTEYIPPIQMNANLIGRID 552
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
C LS A A N Y+RPI++ +DI+ GRH + E + + +I ND +D++ + I
Sbjct: 553 CLLSFAKAAEANKYIRPIVSDSDKIDIKGGRHPVIEKQLPLGEPYIANDVYLDDEKQQII 612
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
IITGPN +GKS ++Q ALI ++ IG FVPA++A +G+ D S +++ +S+F
Sbjct: 613 IITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVGASDNISVGESTF 672
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++++ +L TS+SL L DE G+GT T DGI + + Y + K L TH
Sbjct: 673 MVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPNAKAKTLFATH 732
Query: 667 LTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
E LNE + ++ +R+K Y +SV N ++FL +L+PG + S+G+H A +A
Sbjct: 733 YHE-LNE--MERAFKRIKNYNVSVKEVGNK------VIFLRKLIPGGSEHSFGIHVAKMA 783
Query: 726 GVPAEVIKRAAYVLEAAQNNKHVERWSHENISA 758
G+P ++KR+ +L+ ++ E + + A
Sbjct: 784 GMPKSIVKRSNEILKQLESENRQEGIGGKPVKA 816
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial [Ailuropoda
melanoleuca]
Length = 1123
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 289/602 (48%), Gaps = 84/602 (13%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ ++ T L+I Q G S+ +++ T GRR L+ W +P+
Sbjct: 521 EFMTINGTTLRNLEILQNQTDMKTKG--------SLLWVLDHTKTSFGRRKLKKWVTQPL 572
Query: 231 LDLENLNSRLNAISFFLCSEE-LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
L L +N+RL+A+S L SE + + L+ + DI L S + F
Sbjct: 573 LKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGL-----CSIYHKKCSTQEFF 627
Query: 290 KSICSLLHVNKIFEVGISESLREQLR--LLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+ +L H+ F+ I ++ +R LL I+E EL E + I++
Sbjct: 628 LIVKTLYHLKSEFQALIP-AVNSHVRSDLLQTFILE------IPELLSPVEHYLRILNEQ 680
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
+K L ++ + +++ +E+ E +++ + L + K + P I Y+
Sbjct: 681 AAKTGDKTELFKD--LTDFPLIKKRKDEIQEVTDKIQ----IHLQEIRKILKNPSIRYVT 734
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD----GETKRLF-YHTP----KTRELDNL 458
G I +++ + D G TK + +H+P R L+ L
Sbjct: 735 VSGQEFMI-----------EMKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQL 783
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDH---LLKAVNFAAELDCFLSLALVAHQNNYMR 515
+ +LD + + + + FS+H L KAV+ A +DC SLA VA Q +Y R
Sbjct: 784 REQL---VLD----CSAEWLDFLENFSEHYHSLCKAVHHLATIDCIFSLAKVAKQGDYCR 836
Query: 516 PILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQ 571
P L E + I+NGRH + ++ + D ++PN T + D R+ IITGPN GKS YIKQ
Sbjct: 837 PTLQEERKIVIKNGRHPVIDVLLGEQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQ 896
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
VALI ++ IGS+VPA+ AT+G+ D + ++ QS+FM +L ++RQATS
Sbjct: 897 VALITVMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRQATS 956
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS--ER 681
QSL +LDE G+GT T DGI + T+ +F+ DV L TH + L KS ++
Sbjct: 957 QSLVILDELGRGTSTHDGIAIAYATLEHFIR-DVKSLTLFVTHYPPVCE---LEKSYLQQ 1012
Query: 682 LKFYTMSVLRPENNSTD------VEDIV-FLYRLVPGHALLSYGLHCALLAGVPAEVIKR 734
+ Y M L E+ S + V D V FLY++ G A SYGL+ A LA VP E++ +
Sbjct: 1013 VGNYHMGFLVNEDESKEDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILTK 1072
Query: 735 AA 736
AA
Sbjct: 1073 AA 1074
>gi|88604449|ref|YP_504627.1| DNA mismatch repair protein MutS [Methanospirillum hungatei JF-1]
gi|88189911|gb|ABD42908.1| DNA mismatch repair protein MutS [Methanospirillum hungatei JF-1]
Length = 892
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 280/598 (46%), Gaps = 67/598 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I SV + L LDA L++ Q + R +EG ++ ++ +TPMGRR
Sbjct: 276 IRSVHRSDIGSHLVLDAVTLRNLEVLQNIRD-------RTEEG-TLVATIDLTLTPMGRR 327
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR P+LD +N RL+A+S+F+ + + + D+ I + + SP
Sbjct: 328 LLRKRIAAPLLDPNVINRRLDAVSYFIDRSAVRHDVRTRIHRFPDLERIAGRISYGNASP 387
Query: 277 SFIYT---ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ T A+D LK++ S E GI + L A ++
Sbjct: 388 RDLVTLAAANDAVKRLKTLFST-------EDGIPDEL-------------SGAIAGIRDI 427
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ +L+ I + G ++++G+ +ELD LR I ++ +A LE +
Sbjct: 428 TPLADLITRAIVQDPPALIRKGGVIQDGYHEELDHLRTISRNGKQW---IADLEQQEKER 484
Query: 394 LCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+ I Y GY + I + L +E + +GE Y P R
Sbjct: 485 TGIKSLK--IKYNAVFGYYIEITKANLASVP----DDYERRQTTANGER----YTVPALR 534
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E+++ + ++ +E I RD++ L + ++D + LA VA +N Y
Sbjct: 535 EMESQIATADERLQSLEEEIFRDIIEKASQEVPALQEIAQAIGKIDLYAGLAEVALKNQY 594
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRID-NDGRINIITGPNYSGKSIYIKQ 571
+RP L EP L I+ RH + E ++ F+PND + +I IITG N +GKS Y++
Sbjct: 595 VRPELVDEPTLLIRECRHPVVESSIGGGFVPNDAELSAGSDQILIITGANMAGKSTYMRS 654
Query: 572 VALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATS 623
VALI+ L+ +GSFVPA A +G+ D + + QS+FM+++ ++ +L AT
Sbjct: 655 VALIIILAQMGSFVPATYARIGVVDRIFTRVGAFDDLASGQSTFMVEMMELATILNHATE 714
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
+SL +LDE G+GT T DG + + + P+ L TH E++ G +R+
Sbjct: 715 KSLVILDEIGRGTSTLDGYCIAKAVLEHLHGKRSKGPRCLFATHFHEIV--GIEADLKRV 772
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ +V TD +D++FL +LVPG SYG+H A LAGVPA V+ R+ +++
Sbjct: 773 RNCHFAV-----KETD-KDVIFLRKLVPGATDRSYGIHVAQLAGVPASVVSRSEELMK 824
>gi|335424598|ref|ZP_08553606.1| DNA mismatch repair protein MutS [Salinisphaera shabanensis E1L3A]
gi|334888936|gb|EGM27231.1| DNA mismatch repair protein MutS [Salinisphaera shabanensis E1L3A]
Length = 875
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 175/611 (28%), Positives = 278/611 (45%), Gaps = 76/611 (12%)
Query: 145 IVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGF 204
++D +E + S I S+ ++ L LDA+ L+I + S G R
Sbjct: 250 LIDYVEATQQAALS-HIKSLRTYAVTDTLVLDASTRRNLEIER-----SASGDTR----H 299
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ G++++C TPMG R LR W P+ + + L R AI L A L E LK +
Sbjct: 300 SLVGLLDRCATPMGARALRRWLAEPLRNFDILRHRHLAIETLLSGSH--AGLSERLKEIP 357
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIF---EVGISESLREQLRLLNFDI 321
D+ I + S D + +++ +L V + + + +L EQ+ +
Sbjct: 358 DVERIATRIALAS--ARPRDLSGLNRALTALPAVRRTLADLDAPLLAALHEQIDPAD--- 412
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ + E + ++ G ++ G+ + LDELR + +L
Sbjct: 413 ----------EVRALLERAVVAEPPVVVRDGG---VIAAGYDETLDELRDLSANADGYL- 458
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTL-----EQLQGFEFAFS 436
A LEL + + +H GY + + D + + L+ E
Sbjct: 459 --ADLELRERERTGVDTLKVGYNRVH--GYYIEMGRVHADAAPIDYQRRQTLKAVER--- 511
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
Y TP+ ++ ++ + + L E+A+ +LV + + L A
Sbjct: 512 ----------YITPELKKFEDQVLSARERALAREKALYTELVESLAAYLPKLQAIAAGLA 561
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRIDNDGRIN 555
LD +L+ A +++ P LT P + I GRH + E DT F+ NDT++D+D R+
Sbjct: 562 SLDVLCALSRCALDYHWIAPTLTDTPGVHITGGRHPVVEHFSDTPFVANDTQLDDDCRLL 621
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN GKS Y++Q ALIV L+HIGSFVPA+AAT+G D ++A QS+F
Sbjct: 622 LITGPNMGGKSTYMRQTALIVLLTHIGSFVPAEAATIGPLDRIFTRIGAGDDLSAGQSTF 681
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH- 666
M+++ + +L AT +SL LLDE G+GT T DG+ L + L TH
Sbjct: 682 MVEMSETAQILHHATERSLVLLDEIGRGTSTYDGLALARAVAERLARHNR-AYTLFATHY 740
Query: 667 --LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
LT+L + P S F + NS + +VFL+ + PG A S+GL A L
Sbjct: 741 FELTQLAED--WPASRNAHFEVA-----DYNSGGEQKLVFLHAIRPGPASRSFGLQVASL 793
Query: 725 AGVPAEVIKRA 735
AGVP VI++A
Sbjct: 794 AGVPRVVIRQA 804
>gi|425442953|ref|ZP_18823187.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9717]
gi|389715858|emb|CCH99835.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9717]
Length = 882
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 199/769 (25%), Positives = 337/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYSDISTGEFYTTQA-----SDLTALSLELSRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VSYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ ++E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNNLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|323486939|ref|ZP_08092254.1| hypothetical protein HMPREF9474_04005 [Clostridium symbiosum
WAL-14163]
gi|323399711|gb|EGA92094.1| hypothetical protein HMPREF9474_04005 [Clostridium symbiosum
WAL-14163]
Length = 886
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 172/593 (29%), Positives = 282/593 (47%), Gaps = 72/593 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
+ +F+ LD + L++ +T + G ++ +++K T MG R+LR++
Sbjct: 262 TTGQFMMLDTSTRRNLELIETLREKQKRG--------TLLWVLDKTKTAMGARMLRSFVE 313
Query: 228 RPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
+P++ E + R NAI ++ EE+ E L + D+ +L + + +
Sbjct: 314 QPLIHKEEILKRQNAIEELNMNYISREEIC----EYLNPIYDLERLLGRISYKT--ANPR 367
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
D +F S+ L H+ I + SE L E L D +E I + A + + + +
Sbjct: 368 DLISFRNSLEMLPHIKHILKEFRSELLTEIEGQL--DPLEDLKKLI--DEAIIDDPPVSV 423
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G ++++GF +E D LR E +L EL Q + I
Sbjct: 424 RD---------GGIIKDGFHEEADRLRHAKTEGKTWL-----AELEQKEKESTGIKNLKI 469
Query: 404 VYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
Y GY + F++ + D F T Y T + +EL++++
Sbjct: 470 KYNKVFGYYFEVTNSFKDLVPD-----------YFIRKQTLTNAERYTTDRLKELEDVIM 518
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E + + I + + + A D SL++VA +NNY++P +
Sbjct: 519 GAEDKLFSLEYELFCQVRDGIAAEVKRIQETAHAVALTDVLTSLSVVAIRNNYVKPSINE 578
Query: 521 EPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ ++ I+NGRH V Q M+ F+ NDT +DN R++IITGPN +GKS Y++Q ALI
Sbjct: 579 KGIIHIKNGRHPVVEQMMSGGMFVANDTYLDNGKNRVSIITGPNMAGKSTYMRQTALITL 638
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD A +GL D S + + QS+FM+++ +V +LR AT SL +L
Sbjct: 639 MAQVGSFVPADEADIGLCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRSSLLIL 698
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + Y + K L TH EL EG + + Y +
Sbjct: 699 DEIGRGTSTFDGLSIAWAVVEYISNTKLLGAKTLFATHYHELTELEGTMSG---VNNYCI 755
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+V +DIVFL ++V G A SYG+ A LAGVP VI+RA ++E
Sbjct: 756 AV------KEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPELVIERAKELVE 802
>gi|227877609|ref|ZP_03995663.1| DNA mismatch repair protein MutS [Lactobacillus crispatus JV-V01]
gi|227862803|gb|EEJ70268.1| DNA mismatch repair protein MutS [Lactobacillus crispatus JV-V01]
Length = 865
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 249 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 301 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 345
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 346 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 398
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 399 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 454
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 455 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 504
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 505 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 564
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 565 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 624
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 625 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 684
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 685 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 737
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 738 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 787
>gi|443653414|ref|ZP_21131091.1| DNA mismatch repair protein MutS [Microcystis aeruginosa
DIANCHI905]
gi|159030187|emb|CAO91079.1| mutS [Microcystis aeruginosa PCC 7806]
gi|443334053|gb|ELS48583.1| DNA mismatch repair protein MutS [Microcystis aeruginosa
DIANCHI905]
Length = 882
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 199/769 (25%), Positives = 337/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ ++E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNNLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWAVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|293381577|ref|ZP_06627564.1| DNA mismatch repair protein MutS [Lactobacillus crispatus 214-1]
gi|290921847|gb|EFD98862.1| DNA mismatch repair protein MutS [Lactobacillus crispatus 214-1]
Length = 865
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 249 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 301 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 345
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 346 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 398
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 399 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 454
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 455 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 504
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 505 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 564
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 565 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 624
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 625 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 684
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 685 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 737
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 738 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 787
>gi|294055569|ref|YP_003549227.1| DNA mismatch repair protein MutS [Coraliomargarita akajimensis DSM
45221]
gi|293614902|gb|ADE55057.1| DNA mismatch repair protein MutS [Coraliomargarita akajimensis DSM
45221]
Length = 857
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 282/608 (46%), Gaps = 86/608 (14%)
Query: 166 EVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
E S +K L LD L+IF++ ++G S+ M+ +TP G R+L W
Sbjct: 268 EYSSDKTLLLDPATLRNLEIFKS--------AANTRQG-SLLAAMDGTITPAGARMLERW 318
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHIL----KKFNSPSFIYT 281
P LDLE + R + F+ + L L + L+ ++DI IL + +P +
Sbjct: 319 LCAPELDLEEIQRRQACVEEFVNTPGLSTELQQLLRGIRDIERILGRLQNRMRNPRELGG 378
Query: 282 ASDWTAFLKSIC-SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
D L SI +LL I+E R+ NF+ A C T EL
Sbjct: 379 VRDTLNALPSIAVNLLEFPDTPVAAIAE------RIHNFE-----ALCETLGHGLADELP 427
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE--VASLELVQLPHLCKEM 398
I D G +R+G+ ++LD R + + ++L E + E + +L
Sbjct: 428 GKIDD---------GGTIRDGYDEQLDHFRGLTRDSQQWLTEFELQEQERTGIKNLR--- 475
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y GY + + + + L ++ +R T K RE + L
Sbjct: 476 ----IRYNGAFGYFIEVTKANV------SLVPEDYVRKQTMKNAERYTTDTLKEREREIL 525
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ K + E + L++ I +DHL + AE+D F+ ++A + +Y +P L
Sbjct: 526 HAE--EKSIAREEELFNGLIAAILEHADHLKETAAALAEIDVFIGWGVLAREWDYCKPEL 583
Query: 519 TLEPLLDIQNGRH-VLQEMTVD---------TFIPNDTRIDNDG------RINIITGPNY 562
L I GRH V+++M D F+PND R+ + G +I +ITGPN
Sbjct: 584 DHSDALIIDQGRHPVVEQMMRDERLGLAGTHAFVPNDCRLSSSGIGDDSPQIALITGPNM 643
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQV 614
+GKS YI+QVALIV ++ G++VPA +GL D S + S+FM+++++
Sbjct: 644 AGKSTYIRQVALIVLMAQSGAWVPARNCHLGLVDRIFSRVGASDELARGNSTFMVEMNET 703
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTELLNE 673
+L A+ +SL +LDE G+GT T DG+ + I + D P+ L TH EL
Sbjct: 704 ANILNNASPRSLVILDEIGRGTSTYDGLSIAWAVIEHLHPKDADGPRTLFATHYHELTQ- 762
Query: 674 GCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
L ++ +RL+ Y+++V E N ++I+F+ +++ G A SYG+ A LAG+P VI
Sbjct: 763 --LSQTLDRLENYSVAV--KEWN----DEIIFVRQVIRGAADRSYGIQVARLAGLPNTVI 814
Query: 733 KRAAYVLE 740
RA +LE
Sbjct: 815 DRAKNILE 822
>gi|227432074|ref|ZP_03914087.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352156|gb|EEJ42369.1| DNA mismatch repair protein MutS [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 854
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 267/559 (47%), Gaps = 52/559 (9%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
K+ S+ G++++ T MG RLL+ W LRP+ D E++N RL+ I F + +L + L
Sbjct: 276 KKAGSLLGLIDETKTAMGGRLLKQWLLRPLRDTEDINERLDVIEAFQNEFFVRGALQDHL 335
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K V D+ + + + A + +S+ ++ G+ L +LN
Sbjct: 336 KSVYDLERLAAR--AAMGTMNARELVQLKRSLSAI--------PGMKSVLSSSQGILNH- 384
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
AS +++ + L+ I + G ++ +GF ++DE R + + ++L
Sbjct: 385 -----ASQRLEDMSDLAGLIDEAIVDDPPISIREGDIINDGFDSKIDEYRNVLSQNQKWL 439
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE---EKLDDTTLEQLQGFEFAFSD 437
++ S E + + Y G+ + + KL++ E+ Q
Sbjct: 440 AQLESDE-----RAATGINSLKVKYNKNFGFFIEVSRANVSKLEEGRYERKQTL------ 488
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
T + TP+ +E + L+ + K + E + + L K A+
Sbjct: 489 ----TNAERFVTPELKEHERLINEAQLKRTEREYELFITIRERFKANISRLQKLARQVAQ 544
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRIN 555
LD SLA V+ N ++RP T + +++I+ GRH + E ++ F+ ND +D + +
Sbjct: 545 LDVLASLADVSDNNRFVRPTFTDDNIINIKQGRHPVVEAILEAGEFVANDVNLDQNTAMQ 604
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
+ITGPN +GKS Y++++ALIV L +GSFVPA++A + + D + M QS+F
Sbjct: 605 LITGPNMAGKSTYMRELALIVILGQMGSFVPAESAVLPIFDQIFTRIGANDDMAMGQSTF 664
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++ + + L++A++ SL L DE G+GT T DG+ L I Y + V K L TH
Sbjct: 665 MVEMAEANLALQEASAHSLILFDELGRGTATYDGMALAQAIIEY-LDAHVHAKTLFSTHY 723
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL + K E +K + + E+ ++ FL+++ G A SYG+H A LAG+
Sbjct: 724 HELT--ALVDKHENIKNVHVGAVEDESG-----ELHFLHQIQQGPADKSYGIHVAALAGL 776
Query: 728 PAEVIKRAAYVLEAAQNNK 746
P E+I A +L +N +
Sbjct: 777 PDELIANATTILSGLENQE 795
>gi|347755457|ref|YP_004863021.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
gi|347587975|gb|AEP12505.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
Length = 880
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 165/566 (29%), Positives = 271/566 (47%), Gaps = 74/566 (13%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ G+++ +T MG RLLR W LRP L+L + +RL+A+ + L+ ++
Sbjct: 301 ALLGVLDDTITNMGARLLRQWLLRPSLELPIIEARLDAVDELHRKPIERDGFRQLLRDIQ 360
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
DI ++ + S A L++ C+ L +LRE+L
Sbjct: 361 DIERLVGRL---SLNLATPRDVAALRTSCAHL-----------PALRERL---------- 396
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGY----------GTLVREGFCDELDELRQIYE 374
+C ++ L + E + D+++ + G ++R GF ELDELR +
Sbjct: 397 -LACTSSLLLTLGESLDPCADLHQRMAETLSDAPPVKLDEGGVIRPGFSAELDELRHLRH 455
Query: 375 ELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEF 433
+ ++ ++ + V +Q+ GY + + + L + +E
Sbjct: 456 D------ASGAMAAIEQRERERTGIGSLKVRFNQVFGYYIEVTKANLKYVPAD----YER 505
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
+ +GE Y TP+ ++L+ L D ++L +E + ++L + + + L A
Sbjct: 506 KQTIANGER----YTTPELKQLEARLRDAEVRLLALETQLFQELRAFLVAHAPRLQTAAR 561
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDND-G 552
A LD +LA VA + Y+RP L L I++GRH + E V+ F+PND R++N
Sbjct: 562 IVAVLDVLAALAEVAARRRYVRPELHAGDELVIEDGRHPVVEANVERFVPNDVRMNNSTD 621
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
R+ IITGPN GKS++++Q LIV ++H G+FVPA A++ L D S ++ +
Sbjct: 622 RLLIITGPNMGGKSVFLRQTGLIVLMAHAGAFVPARRASIPLVDRIFTRIGASDNVARGR 681
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP---PKV 661
S+FM+++ + +L AT +SL LLDE G+GT T DG+ L Y D P K
Sbjct: 682 STFMVEMTETACILNTATPRSLVLLDEVGRGTSTFDGLSLAWAVCEYL--HDDPHHAAKT 739
Query: 662 LVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLH 720
L TH EL+ LP ++ E N DIVFL+R++PG A SYG+
Sbjct: 740 LFATHYHELVELAQVLPGVCNVQLAVS-----EQNG----DIVFLHRVIPGSASKSYGIE 790
Query: 721 CALLAGVPAEVIKRAAYVLEAAQNNK 746
LAG+PA VI RA +L + N+
Sbjct: 791 VGRLAGLPASVIARAREILANLEANE 816
>gi|295692267|ref|YP_003600877.1| DNA mismatch repair protein muts [Lactobacillus crispatus ST1]
gi|295030373|emb|CBL49852.1| DNA mismatch repair protein mutS [Lactobacillus crispatus ST1]
Length = 858
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 242 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 293
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 294 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 338
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 339 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 391
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 392 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 447
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 448 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 497
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 498 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 557
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 558 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 617
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 618 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 677
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 678 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 730
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 731 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 780
>gi|288574977|ref|ZP_06393334.1| DNA mismatch repair protein MutS [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570718|gb|EFC92275.1| DNA mismatch repair protein MutS [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 859
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 279/608 (45%), Gaps = 70/608 (11%)
Query: 149 LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFG 208
LE+ + G A+ + + V +++L LD T L++F D G S++
Sbjct: 243 LEETQFG-AARHVSGIAPVLSSRYLHLDVTTQRNLELFDGD-------------GPSLYD 288
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
++N+C T GRR LR W RP++D ++ RL+ L + + L + L + KDI
Sbjct: 289 ILNRCKTACGRRRLREWITRPLMDPGEISRRLDVQETLLNFSDELNDLQKGLVHCKDIER 348
Query: 269 ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFE-VGISESLREQLRLLNFDIVEKAAS 327
L + + S D A ++ +L + + G+S L
Sbjct: 349 SLARLHMRSG--NPRDLAAIRDTLSALPSIEIALKGAGLSHLL----------------P 390
Query: 328 CITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE 387
C + + V +L+ I+ + S+ G G +VR+GF D+LDE R E E+L + E
Sbjct: 391 C-SDDFRDVSDLLARGIEDSPSRVLGNGKIVRDGFDDKLDEWRGFAERGQEWLNDFTQRE 449
Query: 388 LVQL--PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRL 445
+L P L Y GY + I + + D LE + + + + E
Sbjct: 450 RDRLSIPRLK-------TGYSRVFGYYLEIGKGSMRDD-LELPEDYRRRQTLVSAER--- 498
Query: 446 FYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLA 505
Y T + R+ + + ++ E + L+ ++ L LD +SLA
Sbjct: 499 -YTTSELRDFEERMSRSEEEVRKRETELYGMLLEKTLEKTEKLQSLGRALGNLDVLVSLA 557
Query: 506 LVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDG-RINIITGPNY 562
V+ + Y+RP + I+ GRH + E F+PND + DG R+ I+TGPN
Sbjct: 558 EVSRERGYIRPDFNDGGDISIRGGRHPVVEAVQKEIPFVPNDVDMKMDGNRLAIVTGPNM 617
Query: 563 SGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQV 614
+GKS Y++ AL+V ++ +G+++PA++A +GL D + S+FM+++ +
Sbjct: 618 AGKSTYLRMTALLVIMAQMGTYIPAESAELGLCDRVFTRLGARDELAFGNSTFMVEMVET 677
Query: 615 GMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN- 672
+L T +SL +LDE G+GT T DG+ + + Y C PKVL TH EL
Sbjct: 678 ANILHNVTDRSLVILDEVGRGTSTYDGMSIAWAVLEYLQGACGRCPKVLFATHYHELTAL 737
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
E +P L+ RP+ + FL+R++PG A SYG+ A LAG+P V+
Sbjct: 738 ERRMPHVFNLRVEVEE--RPDG-------VTFLHRVIPGQADRSYGVEVARLAGLPRVVL 788
Query: 733 KRAAYVLE 740
RA +LE
Sbjct: 789 CRAQELLE 796
>gi|409351336|ref|ZP_11234098.1| DNA mismatch repair protein mutS [Lactobacillus equicursoris CIP
110162]
gi|407876814|emb|CCK86156.1| DNA mismatch repair protein mutS [Lactobacillus equicursoris CIP
110162]
Length = 857
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 276/585 (47%), Gaps = 60/585 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ ++L++ T L++ Q+ G S+F +++K T MG RLL+ W R
Sbjct: 250 VGQYLQMSNTVQRNLELTQSATTGKKQG--------SLFWVLDKTHTAMGGRLLKQWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L E + +R + + + ++ + LK V D+ + S + +
Sbjct: 302 PLLSKEKILARQEMVQALIDNYFTRENVVDALKGVYDLERL-----SGRIAFGNVNPREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + + ES L DI + + V + + D
Sbjct: 357 LQLSRSLNAVGPILDA-LKESGDSNLIAYAADIDPQEEVAADIQKTIVDDPPMSTKD--- 412
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYI 406
G ++REG ++LD+ R ++L EV+ + + +L I Y
Sbjct: 413 ------GNIIREGVDEDLDKYRGAMNGGKQWLAQMEVSERQKTGIDNLK-------IGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + + ++ + T Y TP+ +E +NL+ + K
Sbjct: 460 RVFGYFIQVSKGNVSKVPQDR-------YMRKQTLTNAERYITPELKEHENLILEAESKS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
++E + L I L K A LD ++ A A + NY RP + +DI
Sbjct: 513 TELEHDLFAKLRDRIKEHIPELQKLGRQLAALDVLVAFAEDAEEKNYCRPTFAKKQEIDI 572
Query: 527 QNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+NGRH + E ++ ++IPND +D D I +ITGPN SGKS Y++Q+ALI ++ +GSF
Sbjct: 573 KNGRHPVVEAVLEAGSYIPNDLTMDEDTSIYLITGPNMSGKSTYMRQMALIAIMAQVGSF 632
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA+AAT+ + D + + + +S+FM+++ + L++A+S+SL L DE G+GT
Sbjct: 633 VPAEAATLPIFDQIFTRIGAADDLYSGKSTFMVEMSEANDALQRASSRSLILFDEIGRGT 692
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG+ L G I Y V K L TH EL E LP LK + + EN
Sbjct: 693 ATYDGMALAGAIIKYL-HDKVGAKTLFATHYHELTELEQTLP---HLKNIHVGATQ-ENG 747
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P EV++ A+ +L+
Sbjct: 748 K-----LIFLHKILPGPADQSYGIHVAKLAGLPREVLREASKMLK 787
>gi|302670850|ref|YP_003830810.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus
B316]
gi|302395323|gb|ADL34228.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus
B316]
Length = 880
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 187/654 (28%), Positives = 309/654 (47%), Gaps = 106/654 (16%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
V A+G LL L +D +++ + GN I + +K++ LD++ L++ +T
Sbjct: 228 VVAAGALLQYL-----ID-MQKSDVGN----ITHIYPYLASKYMLLDSSTRRNLELVETM 277
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ G ++ +++K T MG R LR++ +P++D + R +A+ + +
Sbjct: 278 RDKQKRG--------TLLWVLDKTKTAMGARTLRSFIEQPLIDRNEILKRQSAVESLVKN 329
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTAS---DWTAFLKSI-------CSLLHVN 299
+ E L + D+ ++ K IY + D AF SI +LL V
Sbjct: 330 VVSREEIREYLGPIYDLERLMSKI-----IYKTANPRDLLAFRNSISMIPAIKTALLDVQ 384
Query: 300 KIFEVGISE----SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
E+ E +LR+ L++ IVE+ I KE G
Sbjct: 385 SDAELSALEDNLDALRDIYELIDQAIVEEPPLAI--------------------KESG-- 422
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEV--ASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
+++EGF ++D R+ +L E+ + E + +L I Y + GY
Sbjct: 423 -IIKEGFDADIDHFREAGTNGKTWLAEMEESEKEKTGIKNLR-------IKYSNVFGYSF 474
Query: 414 CI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
+ F++K+ + F T Y TP+ +EL++ + + K+ ++E
Sbjct: 475 EVTNSFKDKVPE-----------YFIRKQTLTNCERYTTPELKELEDTILNAQDKLNNLE 523
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+ + I L D + A LD + SLA VA +N+Y++P + + +++I+ GR
Sbjct: 524 YEMFCKIRDSIALEIDRIQTTAKAIALLDVYASLAYVAEKNHYVKPSINEKGIINIKEGR 583
Query: 531 HVLQEMTVDT---FIPNDTRIDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
H + E +DT FI NDT +DN I+IITGPN +GKS Y++Q ALIV ++ IGSFVP
Sbjct: 584 HPVVERMLDTSDMFISNDTYLDNKKHCISIITGPNMAGKSTYMRQTALIVLMAQIGSFVP 643
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A + + D S + + QS+FM+++++V +LR AT SL +LDE G+GT T
Sbjct: 644 ASKADICVVDRIFTRVGASDDLGSGQSTFMVEMNEVANILRNATPNSLLILDEIGRGTST 703
Query: 639 EDGIGLLGGTINYFVTCDV-PPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNS 696
DG+ + + + K L TH EL EG K + + Y ++V EN
Sbjct: 704 YDGLAIAWAVTEHISNRKILGAKTLFATHYHELTELEG---KMDNVNNYCIAV--KENG- 757
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
+DIVFL ++V G A SYG+ A LAGVP VI RA ++ +N E+
Sbjct: 758 ---DDIVFLRKIVKGGADKSYGIQVAKLAGVPDMVIDRAKEIVTELTDNDITEK 808
>gi|266623035|ref|ZP_06115970.1| DNA mismatch repair protein MutS, partial [Clostridium hathewayi
DSM 13479]
gi|288865199|gb|EFC97497.1| DNA mismatch repair protein MutS [Clostridium hathewayi DSM 13479]
Length = 621
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 287/592 (48%), Gaps = 78/592 (13%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ +D + L++ +T + G ++ +++K T MG RLLR + +P+
Sbjct: 2 EFMIIDTSTRRNLELLETMREKQKRG--------TLLWVLDKTKTAMGARLLRTYIEQPL 53
Query: 231 LDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
+ +++ +R NAI ++ EE+ L+ + I I K +P D
Sbjct: 54 IHKDDIIARQNAIEELNMNYISREEICEYLNPIYDLERLIGRISYKTANPR------DLI 107
Query: 287 AFLKSICSLLHVNKI---FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
+F S+ L ++ + F + + L E+L D +E ++ A V + + +
Sbjct: 108 SFKNSLEMLPYIKDLMGEFTTPLLKELWEEL-----DPLEDVHDLVSR--AIVDDPPVSL 160
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G +++EG+ +E D+LR E +L ++ S E + K + V
Sbjct: 161 RD---------GGIIKEGYHEETDKLRHAKTEGKTWLAQLESRERDKTG--IKNLKVK-- 207
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + + + F +R Y T + +EL++++
Sbjct: 208 -YNKVFGYYFEVT------NSFKGMVPDYFVRKQTLANAER--YTTDELKELEDMILGAE 258
Query: 464 HKILDMERAI---TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E + RD ++ L +A+ A +D SL+ VA +NNY++P +
Sbjct: 259 DKLYTLEYGLFCEVRDTIAAEVLRIQQTARAI---AGIDVMTSLSAVATKNNYVKPRINE 315
Query: 521 EPLLDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVF 577
+ ++DI+NGRH + E M D F+ NDT +DN R++IITGPN +GKS Y++Q ALIV
Sbjct: 316 KGVIDIKNGRHPVVEKMMRDDLFVANDTYLDNTKNRLSIITGPNMAGKSTYMRQTALIVL 375
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GSFVPAD A +G+ D S + + QS+FM+++ +V +LR AT SL +L
Sbjct: 376 MAQLGSFVPADEANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATKNSLIVL 435
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
DE G+GT T DG+ + + + + K L TH EL EG + + Y +
Sbjct: 436 DEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGTI---NGVNNYCI 492
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+V +DIVFL ++V G A SYG+ A LAGVP VI RA +L
Sbjct: 493 AV------KEQGDDIVFLRKIVKGGADKSYGVQVAKLAGVPDSVIVRAKELL 538
>gi|295425864|ref|ZP_06818544.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
gi|295064467|gb|EFG55395.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
Length = 865
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 280/586 (47%), Gaps = 61/586 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 250 VNQYLQMSHTVQNNLELISSAKTGKKMG--------SLFWVLDKTHTAMGGRLLKRWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L +E +N R + L + ++ + LK V D+ + + + +
Sbjct: 302 PLLSIEEINKRQEMVQSLLDNYFTRENVIDALKGVYDLERLTGRI-----AFGNVNAREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYELVIGIIDV 346
L+ SL V I + + +S +L+ D ++ A I+T L V + I +
Sbjct: 357 LQLSRSLQAVPVILD-ALKQSDSTELKDFADKIDPLKGVAELISTTL--VKDPPILTTE- 412
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
G L+++G +LD R ++L A +E + E + Y
Sbjct: 413 --------GGLIQDGVDAQLDRYRDAMNNGKKWL---AQMEADEREKTGIENL--KVGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + L++ ++ T Y TP+ +E +NL+ + +
Sbjct: 460 KVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLIMEAQTRS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLD 525
D+E + L + + L K N A LD + A VA +NNY RP + +D
Sbjct: 513 TDLEYDLFVKLREEVKKYIPALQKLGNQLAALDVYTGFATVAEENNYCRPSFHSANQNID 572
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ GRH + E MT ++IPND ++ +D I +ITGPN SGKS Y++Q+ALI ++ +GS
Sbjct: 573 VVGGRHPVVEKVMTAGSYIPNDVKMADDTDIYLITGPNMSGKSTYMRQMALIAIMAQVGS 632
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD+A + + D + + + +S+FM+++ + L+ AT +SL L DE G+G
Sbjct: 633 FVPADSADLPIFDQIFTRIGAADDLISGKSTFMVEMSEANEALQYATKRSLVLFDEIGRG 692
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPEN 694
T T DG+ L G + Y + V K L TH EL + L K+ LK + V E
Sbjct: 693 TATYDGMALAGAIVKY-LHDKVGAKTLFATHYHELTD---LDKTLHHLK--NIHVGATEE 746
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 747 NGK----LIFLHKILPGPADQSYGIHVAQLAGLPHRVLREATKLLK 788
>gi|110669043|ref|YP_658854.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi DSM 16790]
gi|121687125|sp|Q18FJ9.1|MUTS_HALWD RecName: Full=DNA mismatch repair protein MutS
gi|109626790|emb|CAJ53258.1| DNA mismatch repair protein MutS [Haloquadratum walsbyi DSM 16790]
Length = 932
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 161/610 (26%), Positives = 285/610 (46%), Gaps = 65/610 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ L++DATA ++L++F + R G ++ +++ + +GRR L +W RP
Sbjct: 293 DTALRVDATAIQSLELFDS----------RQPYGETLIETIDETSSALGRRTLESWLRRP 342
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ D E + +R +A++ + ++ +L E L ++ D+ + + A D + L
Sbjct: 343 LADHEAIKTRYDAVAALAENPLVVETLTEKLSHIYDLERLTARTAREQA--DARDMRSLL 400
Query: 290 KSICSLLHVNK-----IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
+S+ S+ + + E + EQL+ D ++ + I T A + +
Sbjct: 401 QSLDSIPEIKSALIEVLTETELPAETLEQLQA-ELDSLDDIRTLIDT--AVCSDPPQTVT 457
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
D G ++ +GF D+LD++R+ E E++ E+ + E + E +
Sbjct: 458 D---------GDVIAKGFNDDLDDIREREEAGREWVSELETRERERTGIDSLE-----VG 503
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y GY + + LD E + ++ ++TP + ++ + +
Sbjct: 504 YTEVHGYYIEVTNPNLDHVPDEYTRRQTLKNAER--------FYTPALKRREDEIIAASN 555
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+ +E + D+ + + + L + LD +S A +A + Y+RP +T + L
Sbjct: 556 RADKLEYELFCDIRAEVAAETSRLQAVADAIGRLDALVSFATIAISHAYVRPEITADTLA 615
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
I+ GRH + E T F+PN + G I +ITGPN SGKS Y++Q+A I L+ GSF
Sbjct: 616 -IEAGRHPVVEQTQAEFVPNGITFEK-GHIAMITGPNMSGKSTYMRQIAHICILAQAGSF 673
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPADAA + + D S ++ +S+FM ++ ++ +L AT SL LLDE G+GT
Sbjct: 674 VPADAAQIPVLDRIFTRIGASDDISGGESTFMREMSEMTDILHNATESSLILLDEVGRGT 733
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
T DG + T+ F+ ++ + L TH +L G LP + L F P+N+
Sbjct: 734 STTDGRAIARATVE-FIHNEIGARTLFTTHYHDLTTVTGSLPSAFNLHFKVHRKTHPDND 792
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
++ + FL+R+ G A SYG+ A LAGVP V+ E AQ H E +
Sbjct: 793 AS----VTFLHRVTSGAADSSYGVEVAKLAGVPTPVV-------EQAQRYIHTEGEDYTE 841
Query: 756 ISAQDQQYKN 765
IS Q + +
Sbjct: 842 ISEQGTHHHD 851
>gi|160939142|ref|ZP_02086493.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC
BAA-613]
gi|158438105|gb|EDP15865.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC
BAA-613]
Length = 881
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 301/645 (46%), Gaps = 76/645 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ S +++ +D + L++ +T + G ++ +++K T MG R
Sbjct: 249 ITTITPYSTGQYMVIDTSTRRNLELVETMREKQKRG--------TLLWVLDKTKTAMGAR 300
Query: 221 LLRNWFLRPILDLENLNSRLNAIS----FFLCSEELMASLHETLKYVKDIPHILKKFNSP 276
LLR +P++ + + R NA+ ++ EE+ L+ + I I K +P
Sbjct: 301 LLRACIEQPLIHRDEIIKRQNAVEELNMNYISREEICEYLNPIYDLERLIGRISYKTANP 360
Query: 277 SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV 336
D AF S+ L ++ +I SE L E R L+ L +
Sbjct: 361 R------DLIAFRSSLEMLPYIKRILGEFNSELLAELGRELD-------------PLQDI 401
Query: 337 YELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLC 395
++L+ I G ++++G+ E D+LR E +L E+ + E +
Sbjct: 402 FQLIGDAIVEEPPITVREGGIIKDGYNQEADKLRHAKTEGKNWLAELEAKEKEKTGIKTL 461
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
K F Y ++ F++++ D + + T + T + ++L
Sbjct: 462 KVKFNKVFGYYFEV---TNSFKDQVPDYYIRK-----------QTLTNAERFTTDELKQL 507
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
++++ K++ +E + ++ I + K A +D F SL++VA + NY++
Sbjct: 508 EDIIMGAEEKLVSLEYDLFCEVRDKIGAEVIRIQKTAKSIAGIDVFCSLSVVATRRNYVK 567
Query: 516 PILTLEPLLDIQNGRH--VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQV 572
P + + ++ I+NGRH V Q M D F+ NDT +DN R+++ITGPN +GKS Y++QV
Sbjct: 568 PSINDKGVIQIKNGRHPVVEQMMRDDMFVANDTFLDNGKNRLSVITGPNMAGKSTYMRQV 627
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV ++ +GSFVPA A +G+ D S + + QS+FM+++ +V +LR AT
Sbjct: 628 ALIVLMAQLGSFVPAQEADIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRN 687
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERL 682
SL +LDE G+GT T DG+ + I + + K L TH EL EG + +
Sbjct: 688 SLLVLDEIGRGTSTFDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEGTIAG---V 744
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAA 742
K Y ++V +DIVFL ++V G A SYG+ A LAGVP VI RA + E
Sbjct: 745 KNYCIAV------KEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIARAKEIAEEL 798
Query: 743 QNNKHVERWSH-ENISAQDQQYKNA-------VEKMLAFDVLKGD 779
+ R IS+ Q+K ++++ FD +K D
Sbjct: 799 SDADITARAKEIAEISSNITQHKAVPKPDEVDLQQLSFFDTVKDD 843
>gi|315651393|ref|ZP_07904418.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486352|gb|EFU76709.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 880
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 298/636 (46%), Gaps = 96/636 (15%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L E ++S A I S+ ++ +D ++ L++ +T +
Sbjct: 235 ASGAMLRYL--------YEMQKSSCAQIV--SISAYKNGDYMIVDTSSRRNLELVETMRE 284
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
G S+ G+++K T MG R+LR++ +P+++ E + +R A++
Sbjct: 285 KKKNG--------SLLGVLDKTSTAMGARMLRSFLEQPLINRERILNRQEAVAELFERYI 336
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI-CSLLHVNKIFEVGISESL 310
L E L V D+ ++ + + T + T L S+ S+ + I EV
Sbjct: 337 DREELREYLSPVYDLERLMAR------VVTKNANTRDLLSLSASMKMIAPIKEV------ 384
Query: 311 REQLRLLNFDIVEKAASCITTELAYV------YELVIGIID--VNRSKEKGY--GTLVRE 360
LN +C + E+ + E +I IID VN G +++
Sbjct: 385 ------LN--------NCTSGEIVKINEGLDRLEDIIDIIDRAVNEDSPLSLKEGNIIKT 430
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FE 417
G+ E+D+LRQ E +L ASLE + + I Y GY + F+
Sbjct: 431 GYNVEIDKLRQAKTEGKNWL---ASLEADEKEKTGIKNLK--IKYNKVFGYYFEVTNSFK 485
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
+ + D F T Y T K +EL+N++ K+ ++E + ++
Sbjct: 486 DMVPDY-----------FVRKQTLTNAERYTTDKLKELENIILGAEDKLNNLEYEVFTEV 534
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
+ + + + A +D SLA VA+ NNY RP + ++DI++GRH + E
Sbjct: 535 RDTVADNVNRIQSSAKSLAYIDAICSLATVAYNNNYTRPQINTNGVIDIKDGRHPVVESM 594
Query: 538 V--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGL 594
+ D+FI NDT +D N R++IITGPN +GKS Y++Q ALI ++ IGSFVPA A++ +
Sbjct: 595 LGDDSFIANDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICMMAQIGSFVPASQASLCV 654
Query: 595 TD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLG 646
D S + + QS+FM+++ +V +LR AT SL +LDE G+GT T DG+ +
Sbjct: 655 CDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVILDEIGRGTSTFDGLAIAW 714
Query: 647 GTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
+ + + K L TH EL EG LP + Y + V +N IVF
Sbjct: 715 AVVEHISNIKLIGAKTLFATHYHELSELEGTLPG---VNNYCILVKERGDN------IVF 765
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
L ++V G A SYG+ A LAGVP V +RA ++E
Sbjct: 766 LRKIVTGGADKSYGIQVAKLAGVPESVTERAKELIE 801
>gi|169824440|ref|YP_001692051.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687741|sp|B0S1C1.1|MUTS_FINM2 RecName: Full=DNA mismatch repair protein MutS
gi|167831245|dbj|BAG08161.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 856
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 177/608 (29%), Positives = 288/608 (47%), Gaps = 91/608 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+S + +N+F+++D+ + L+I + S G S+FG++N T MG R
Sbjct: 245 INSSRKYYINEFMEIDSNSVINLEIQKNLYTNSKNG--------SLFGVLNHTKTSMGSR 296
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL ++ RP++D E + R N + EL+ +L L + D+ ++ K + S
Sbjct: 297 LLHSYLERPLMDKEEILIRQNRVEEIFEDYELLVNLENCLDGIYDLDRLIAKLSYKS--A 354
Query: 281 TASDWTAFLKSI------CSLLHVNKIFEVGISESLREQLRLLNFDIVEKA----ASCIT 330
A D A SI +LL+ NK I E L + LR + +D+++K+ I
Sbjct: 355 NAKDLIALKVSIEKIPYLKNLLNCNKKNVQLIGEKL-DDLRDI-YDLIDKSIVDDPPVIL 412
Query: 331 TELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR----QIYEELPEFLEEVASL 386
TE G L++ F +ELD+LR EL E+ E++
Sbjct: 413 TE----------------------GNLIKPNFSNELDQLRYNRVNGKNELVEY--EMSEK 448
Query: 387 ELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF 446
+ + + +L IV+ ++GY + D T L + T
Sbjct: 449 DRLGIKNLK-------IVFNKKLGYFI--------DVTKSNLNKVGEDYEKRQTLTNSSR 493
Query: 447 YHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLAL 506
+ T + +++ + D +I ++E I D+ I + K+ + A +D SLA
Sbjct: 494 FKTKQLEAIESKILDSEDEIFELEYKIFEDIRKIILENLSRIKKSADLIAIIDVSNSLAK 553
Query: 507 VAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYS 563
A+ NNY++P + L+D+ RH + E++V FI ND I I +ITGPN S
Sbjct: 554 CAYLNNYIKPDINTYGLIDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMS 613
Query: 564 GKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVG 615
GKS Y++QVALI L+ IGSFVPA A + + D S ++ +S+FM+++ ++
Sbjct: 614 GKSTYLRQVALICILNQIGSFVPATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMS 673
Query: 616 MMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLN 672
+++ ATS SL +LDE G+GT T DG+ L + Y ++ D+ K L TH LTEL
Sbjct: 674 NIIKYATSNSLLVLDEIGRGTSTYDGLSLAWAIVEY-ISKDIKAKTLFATHYHELTEL-- 730
Query: 673 EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVI 732
+ + M V E N + I+FL ++ G SYG+ A LAG+P +I
Sbjct: 731 -----EKKLDNLINMKVDIKETNDS----IIFLRKITRGSTDKSYGIEVAELAGMPKTLI 781
Query: 733 KRAAYVLE 740
KRA +L+
Sbjct: 782 KRAKSILK 789
>gi|363892205|ref|ZP_09319373.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM2]
gi|361964155|gb|EHL17199.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM2]
Length = 851
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/588 (27%), Positives = 293/588 (49%), Gaps = 76/588 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R +++F ++NK T MG RLL+ + L+P+ D + RLN +S F+ + +
Sbjct: 272 RKNNSYTLFWVLNKANTSMGSRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSH 331
Query: 259 TLKYVKDIPHILKKFNSPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L+ V D+ I S +Y + D KS+ ++ + IF+ G ++S E+L
Sbjct: 332 ILREVYDLERI-----SNRIVYDTVSHRDLLNLKKSLKAVNEIKNIFK-GENDSRFEEL- 384
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIID-VNRSKEKGYGTLVREGFCDELDELRQIYE 374
++++ K +L + L+ I+ + +K + +++ + ++L R + E
Sbjct: 385 ---YEVLSK------NDLMPIINLIENSIEEIGEDFKKEH--IIKSSYDEKLAYYRDLLE 433
Query: 375 ELPEFLEEVAS--LELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
L ++ S E + +L I Y GY + I T LQ F
Sbjct: 434 NTSNILIKMESDEREKTGIKNLK-------ISYNKVFGYYIEI--------TKAALQNF- 477
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD-------MERAITRDLVSHICLFS 485
+M + +R R ++N L I ++L +E ++ +++ + F
Sbjct: 478 ----NMPSDYERRQTLVSSERFINNNLKKIEEEMLSAKQGESQLESSLYKEVKEELKNFI 533
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIP 543
+++ +++D + +LA A +N+Y++P+++ + + I+NGRH + E + + ++P
Sbjct: 534 PKIMQVAEMISQIDVYTALAKTAIENDYVKPMISTDGNIVIKNGRHPVIEKLLPNEEYVP 593
Query: 544 NDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH---- 599
NDT + +IITGPN +GKS Y++QVA+I+ ++HIGS+VPA A + + DS +
Sbjct: 594 NDTDL-TSSETHIITGPNMAGKSTYMRQVAIIMLMAHIGSYVPASFAQIPIIDSIYTRIG 652
Query: 600 ----MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
++ QS+FM+++ +V +L+ AT SL +LDE G+GT T DG+ L + Y C
Sbjct: 653 ASDDLSMGQSTFMVEMTEVSNILKNATQNSLIILDEIGRGTSTYDGMSLAFSIVEYI--C 710
Query: 656 D-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHA 713
+ + K LV TH EL EG K + +K Y M V D ++I FL +++ G A
Sbjct: 711 EHIKAKTLVSTHYHELTALEG---KYKNIKNYCMLV-------DDSKEIKFLKKIILGKA 760
Query: 714 LLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
SYG+H A LA +P EV++RA +L + ++ + S QDQ
Sbjct: 761 DKSYGIHVAQLADLPYEVLERANIILSKLETSEKKSSKKYNQKSEQDQ 808
>gi|299144077|ref|ZP_07037157.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518562|gb|EFI42301.1| DNA mismatch repair protein MutS [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 868
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 175/635 (27%), Positives = 317/635 (49%), Gaps = 69/635 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
++S+I + +++L LD ++ L++ + GI + S+ +++K T MG R
Sbjct: 256 LNSIIYYNSDEYLLLDESSKRNLELVK--------GINTGNKSQSLLEILDKTKTSMGSR 307
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W P+L+ +N R + I+ L+ L LK + DI + K ++ +
Sbjct: 308 ELKKWIEEPLLNECAINDRFDKINELKRDLLLLDDLKLQLKEIYDIERLSVKISNRTI-- 365
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
T + + L S+ S+ ++ I IS N +++ A S LA + + +
Sbjct: 366 TPKEIISLLISLNSIKNIKNIL---ISSD--------NLTLIKIAESL--DSLASIRKRI 412
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
II + ++ G+ ELDEL E+ E+ + SLE + +
Sbjct: 413 ADIIIDDPPVNIDENRFIKTGYSTELDELFAASEKGREW---ILSLEDKERKRTSIKGL- 468
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL- 459
I Y +GY + + + + + ++ S+ Y + + +E+++ L
Sbjct: 469 -KIKYNKILGYFIEVTKSYSNQVPKDYIRKQTLVGSER--------YFSIELKEMESKLL 519
Query: 460 ---GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
G+ + +++ +++ L ++I + K ++LD +SL VA NNY+RP
Sbjct: 520 SSKGEAFKLQMEIYKSLKEFLANNII----QIQKVAKNISKLDVLVSLCTVAIDNNYVRP 575
Query: 517 ILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVA 573
+ +++I+NGRH + E+ + + F+PNDT +D N+ I+IITGPN +GKS Y++QVA
Sbjct: 576 SINKNGIIEIKNGRHPIVELKLQEELFVPNDTLLDTNNNLIHIITGPNMAGKSTYMRQVA 635
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+IV ++H+GS+VP ++A + L D S ++ S+FM+++ +V +++ AT S
Sbjct: 636 IIVIMAHMGSYVPCESANISLVDKIFTRIGASDNLAKGDSTFMVEMKEVANIVKNATKNS 695
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFY 685
L +LDE G+GT T DG+ + + Y VT ++ K L TH EL+N K +
Sbjct: 696 LIILDEVGRGTSTYDGLSIAWALVEYLVT-NIHAKTLFATHYHELVN--LSNKYNNINNL 752
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T+SV +N+S IVFL ++V G + SYG+ A LAG+ +I+R+ +LE QNN
Sbjct: 753 TISV-EKQNDS-----IVFLRKIVEGFSNNSYGIDVAKLAGINDFIIQRSNEILEFIQNN 806
Query: 746 KHVERWSHENISAQDQQYKNAVEKMLAFDVLKGDL 780
+ + NI+ +D K V + FD+ K +
Sbjct: 807 EDMN--IKNNIAKKD---KIKVSQKTIFDMKKDEF 836
>gi|336113900|ref|YP_004568667.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
gi|335367330|gb|AEH53281.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
Length = 858
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 280/592 (47%), Gaps = 56/592 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ +FL +D + L++ +T + G+ K+G S+ ++++ +T MG RLL+ W R
Sbjct: 244 VRRFLNIDYYSKRNLELTETIR-------GQGKKG-SLLWLLDETMTAMGGRLLKQWIGR 295
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L E + +RL + FL + LK V D+ + + + +
Sbjct: 296 PLLKQEKIEARLQMVETFLNHYFEREDIRGRLKEVYDLERLAGR-----VAFGNVNARDL 350
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLN-FDIVEKAASCITTELAYVYELVIGIIDVN 347
++ CSL + I V S E +L D E EL + E I
Sbjct: 351 IQLKCSLQQIPGIRAVMESMESPESKKLAALLDPCE--------ELTDLLERAIEDSPPV 402
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
KE G ++R+G+ +ELD R + ++ +ASLE + + + Y
Sbjct: 403 SVKE---GGMIRDGYNEELDRYRDASKNGKQW---IASLEREERERTGIKSL--KVGYNR 454
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + ++ L L+ + +R TP+ +E + L+ +++
Sbjct: 455 VFGYYI-----EVTKANLHLLEEGRYERKQTLANAERFI--TPELKEKEALILQAEERMI 507
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQ 527
D+E + ++ +H+ F L + + +D S A+V+ + +Y +P+ + +L I
Sbjct: 508 DLEYELFTEIRAHVKEFIPRLQRLAKAVSTIDVLQSFAVVSEKRHYTKPVFRTDGVLKIT 567
Query: 528 NGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH + E +D +++PND +D + I +ITGPN SGKS Y++Q+AL V L+ IG FV
Sbjct: 568 EGRHPVVEKVLDSQSYVPNDCLMDENREILLITGPNMSGKSTYMRQIALTVILAQIGCFV 627
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A + + D + + + QS+FM+++ + + AT +SL L DE G+GT
Sbjct: 628 PAREAELPVFDRIFTRIGAADDLISGQSTFMVEMLEAKNAIANATERSLILFDEIGRGTS 687
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DG+ L I Y + ++ K L TH EL ++ K + V E N
Sbjct: 688 TYDGMALAQAMIEY-IHDEIGAKTLFSTHYHEL----TALSADLGKLQNVHVTAMEQNGK 742
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+VFL+++ G A SYG+H A LAG+P +VI+RA +L A +N + E
Sbjct: 743 ----VVFLHKIKEGPADKSYGIHVAKLAGLPEQVIRRAEKILHALENQDNGE 790
>gi|110636573|ref|YP_676780.1| DNA mismatch repair protein MutS [Cytophaga hutchinsonii ATCC
33406]
gi|123059063|sp|Q11YS6.1|MUTS_CYTH3 RecName: Full=DNA mismatch repair protein MutS
gi|110279254|gb|ABG57440.1| DNA mismatch repair protein MutS [Cytophaga hutchinsonii ATCC
33406]
Length = 856
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 281/569 (49%), Gaps = 55/569 (9%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
EG + +++ TPMG RLL+ W + P+ +L + RL+ + + ++EL +L + LK
Sbjct: 274 EGVPLIEILDHTKTPMGARLLKKWLILPLKELTPIQERLDTVELLVKNKELTTTLVDELK 333
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDI 321
+ D+ ++ K + + +S+ L V I + L++Q + + +
Sbjct: 334 PIGDLERLISKVAARRV--NPREMVQLKRSLERL--------VPIQQLLKQQDQHVLLKL 383
Query: 322 VEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLE 381
E+ C Y+ ++ ++ + G ++R+G ELDELR I ++L
Sbjct: 384 AEQINPC-----EYLAGRILNMLKEDAPMLTNQGRIIRDGCNAELDELRAIAYTGKDYLL 438
Query: 382 EVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGE 441
++ E+ + + I Y GY + ++ +T E++ + G
Sbjct: 439 QIQQREIERTG-----ISSLKISYNKVFGYYL-----EVTNTHKEKVPADWIRKQTLTGA 488
Query: 442 TKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCF 501
+ Y T + + + + KI +E+ + +DLV + + +L+ A++DC
Sbjct: 489 ER---YITEELKIYEEKILGAEDKINVIEQKMFQDLVLEAESYINPILQNARIVAQIDCL 545
Query: 502 LSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INII 557
S A A NNY +PI+ L++I+ GRH + E + +++IPND +D++ + + II
Sbjct: 546 CSFAHAAVANNYCKPIVEDSALINIKAGRHPVIEKQLPLGESYIPNDIYLDDETQQVMII 605
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMI 609
TGPN +GKS ++Q ALIV ++ GSFVPA AT+G D S +++ +S+FM+
Sbjct: 606 TGPNMAGKSALLRQTALIVLMAQAGSFVPATHATIGTVDKVFTRVGASDNLSKGESTFMV 665
Query: 610 DLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLT 668
++++ +L + +SL L+DE G+GT T DGI + + + + PK L TH
Sbjct: 666 EMNETASILNNLSGRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPNFRPKTLFATHYH 725
Query: 669 EL--LNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
EL L E +R+K + +SV N ++F+ L PG + S+G+H A +AG
Sbjct: 726 ELNQLTEDL----KRVKNFNVSVKEAGNK------VIFMRTLKPGGSEHSFGIHVAQMAG 775
Query: 727 VPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
+P ++ RA ++ + +HV R HE+
Sbjct: 776 MPTSLVLRANEIMGHLE-KEHV-REGHED 802
>gi|182418497|ref|ZP_02949790.1| DNA mismatch repair protein MutS [Clostridium butyricum 5521]
gi|237667660|ref|ZP_04527644.1| DNA mismatch repair protein MutS [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182377660|gb|EDT75205.1| DNA mismatch repair protein MutS [Clostridium butyricum 5521]
gi|237656008|gb|EEP53564.1| DNA mismatch repair protein MutS [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 956
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 193/755 (25%), Positives = 344/755 (45%), Gaps = 101/755 (13%)
Query: 12 HRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEESFLSALKRS 71
++G+S D S + N L+D + + P+ I + ES ++ +K
Sbjct: 134 EKIGISTSDISTGEFKTTSF---KNIRMSLLDEIA-KVNPKEILLDVNASESLINDIK-- 187
Query: 72 DGTTEA-PTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC--YLNSMMDMGSEV 128
G + A T K I S+++ + L V+G+D+ + R+ Y+N M
Sbjct: 188 -GISSALITKKDFSDFIVSFDELKEQFSDLEVSGLDNERELTSRVLLKYINETQMMS--- 243
Query: 129 QVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQT 188
L N ++ LEQ E N ++ +D+ + L++ ++
Sbjct: 244 -----------LTN---INLLEQYEIIN---------------YMTIDSNSRRNLELTES 274
Query: 189 DKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLC 248
+ + G S+ +++K T MG R LR W P++ + RL+ +
Sbjct: 275 IREKTKKG--------SLLWVLDKSATTMGGRTLRRWIDEPLIIKSEIEKRLSGVEEVFN 326
Query: 249 SEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISE 308
S L LK + DI I+ K ++ + A D + S+ + + ++ + S
Sbjct: 327 SISFNDDLRTALKEIYDIERIVGKISNQNV--NAKDMLSLKSSLSRIPEIKELLKYAKSP 384
Query: 309 SLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L E N D ++ + + L I KE G ++++G+ DE+DE
Sbjct: 385 LLCEYYD--NLDTLDDVRDLLEKSIKEDPSLTI--------KE---GNIIKDGYNDEVDE 431
Query: 369 LRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQ 427
LRQ E+ +A+LE + K + V Y GY + ++
Sbjct: 432 LRQSKIHGKEW---IAALENREREFTGIKSLKVG---YNKVFGYYI-----EISKANFSS 480
Query: 428 LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDH 487
+ + +R K E D +LG K++++E A+ ++ + +
Sbjct: 481 IPEGRYIRKQTLTNAERYITEELKVME-DKILGS-EEKLVNLEYALFMEVRNEVEKHIAR 538
Query: 488 LLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPND 545
L K+ ++LD +LAL+A +N+Y++P + ++ I GRH + E + F+ N+
Sbjct: 539 LKKSARIISDLDGVSTLALIALENDYVKPEINETGIIQINEGRHPVVEKVIGRGEFVSNN 598
Query: 546 TRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
T + D+D + +ITGPN +GKS Y++QVALI ++ IGSFVPA +A + + D
Sbjct: 599 TILNDDDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAVSANISICDKIFTRIGA 658
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC- 655
S + +S+FM+++ +V +L+ ATS+SL LLDE G+GT T DG+ + I Y
Sbjct: 659 SDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYITKNE 718
Query: 656 DVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
++ K L TH EL+ EG + +K Y+++V + E++ ++FL +++ G A
Sbjct: 719 NLRCKTLFATHYHELVKLEGTI---RGVKNYSVAVKKNEDS------VIFLRKIIEGGAD 769
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
SYG+ A LAG+P VI+RA +LE + V+
Sbjct: 770 ESYGIEVAKLAGLPNAVIERAREILEDLEKANKVD 804
>gi|147677674|ref|YP_001211889.1| DNA mismatch repair protein MutS [Pelotomaculum thermopropionicum
SI]
gi|189083168|sp|A5D2K2.1|MUTS_PELTS RecName: Full=DNA mismatch repair protein MutS
gi|146273771|dbj|BAF59520.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
Length = 863
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 164/583 (28%), Positives = 276/583 (47%), Gaps = 58/583 (9%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
K++ LDA L++ + I ++ +++ VT MG RLLRNW +P
Sbjct: 258 GKYMILDANTRRNLELTR--------AISDGSRRNTLLSVIDHTVTAMGGRLLRNWIEQP 309
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSF-IYTASDWTAF 288
+LD+ + +RL A + L L LK V D+ + K SF A D
Sbjct: 310 LLDVAEIKARLEATEDLAGNAMLRLELKSLLKNVYDLERLTGKI---SFGTANARDLIGL 366
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
KS+ +L + ++ L + K + L V EL+ ID N
Sbjct: 367 KKSLANLPLI------------KQLLLAQAGAALLKDVARSIDPLEEVRELLEAAIDDNP 414
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G ++++G+ E+D LRQ E L + E + K + V +
Sbjct: 415 PLSLKDGGIIKKGYNHEVDRLRQARREGKSMLAGLEERERARTG--IKSLKVG---FNKV 469
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + L+ + + A ++ + TP+ +E ++++ ++
Sbjct: 470 FGYYIEVTRANLELVPEDYQRRQTLANAER--------FITPELKEYEDMILRAEERLAS 521
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+ER + +++ + + K+ + A D SLA A + Y RP + + L +++
Sbjct: 522 LERRLFDEVLERLSGEIHRIQKSASAIATADALYSLAEAAVKGRYSRPEIAEDGKLHVKD 581
Query: 529 GRHVL--QEMTVDTFIPNDTRIDND-GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
GRH + Q M F+PNDT +DN+ R ++TGPN +GKS Y++QVALIV L+ IGSFV
Sbjct: 582 GRHPVLEQVMGPGRFVPNDTFMDNEESRFILLTGPNMAGKSTYMRQVALIVLLAQIGSFV 641
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PA A + + D S + QS+FM+++++ +++ +AT +SL ++DE G+GT
Sbjct: 642 PALFARIPVFDRIFTRVGASDDIAGGQSTFMVEMNECRIIVNEATEKSLIIMDEVGRGTS 701
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
T DGI + Y T + K L TH EL + +P + + ++V R E
Sbjct: 702 TYDGISIARALAEYIHT-KIRAKTLFSTHYHELTDLDSMPG---IVNFNVAV-REEG--- 753
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
EDI+FL ++VPG + SYG+ A LAG+P E+I R+ +L+
Sbjct: 754 --EDIIFLRKVVPGKSDRSYGIQVARLAGLPGEIINRSMEILK 794
>gi|307564801|ref|ZP_07627329.1| DNA mismatch repair protein MutS [Prevotella amnii CRIS 21A-A]
gi|307346523|gb|EFN91832.1| DNA mismatch repair protein MutS [Prevotella amnii CRIS 21A-A]
Length = 887
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 285/602 (47%), Gaps = 79/602 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + K++++D +L++ T +EG S+ +++ +TPMG R
Sbjct: 268 ITALTRIEEEKYVRMDRFTIRSLELISTIN----------EEGTSLLNVIDHTITPMGGR 317
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
+LR W + P+ ++ + RL+ + +F + ++ E + D+ I+ K SP
Sbjct: 318 MLRRWVVFPLKTVKTIEERLDIVDYFFKQQNFCETIQEQFHRIGDLERIISKVAVGRVSP 377
Query: 277 -SFIYTASDWTAFLKSICSLLHV-NKIFE-VGISESLREQLRLLNFDIVEKAASCITTEL 333
+ + A + + LH NK+ + +G +L E LR + +EK +L
Sbjct: 378 REVVQLKNALKAIIPVKEACLHADNKVLKRIGEQLNLCESLR----NRIEKEIQNDPPQL 433
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
G ++ G+ ELDELR I + E+L ++ E
Sbjct: 434 T------------------NKGNIIAHGYNQELDELRTIRDHGKEYLMKIQQQE------ 469
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
K + I + + GY + + D E ++ A ++ Y T +
Sbjct: 470 -AKRTGINSLKIGFNNVFGYYLEVRNTFKDSVPQEWIRKQTLAQAER--------YITQE 520
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + +IL +E + +L++ + F + N A LDC S + ++
Sbjct: 521 LKEYEEKILGADERILILENKLFLELINDMQEFIPQIQINANLIAHLDCIFSFYYTSKEH 580
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSI 567
NY+RPI+ +L+I+ GRH + E + + +IPND ++ND + I +ITGPN +GKS
Sbjct: 581 NYIRPIVDDSNILNIKQGRHPVIETQLPLGEQYIPNDVLLNNDDQQIMMITGPNMAGKSA 640
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALIV L+ IG FVPA++AT+G+ D S +++ +S+FM+++ + +L
Sbjct: 641 LLRQTALIVLLAQIGCFVPAESATIGVVDKIFTRVGASDNISLGESTFMVEMTEASNILN 700
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPK 678
T SL L DE G+GT T DGI + + Y + L TH E LNE + K
Sbjct: 701 NVTPHSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRAKARTLFATHYHE-LNE--MEK 757
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
+ +K Y +SV E N I+FL +L G + S+G+H A +AG+P ++KRA
Sbjct: 758 NFHGIKNYNVSV--KEVNGK----IIFLRKLEKGGSEHSFGIHVADIAGMPRSIVKRAKT 811
Query: 738 VL 739
+L
Sbjct: 812 IL 813
>gi|149236684|ref|XP_001524219.1| hypothetical protein LELG_04189 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451754|gb|EDK46010.1| hypothetical protein LELG_04189 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 641
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 169/605 (27%), Positives = 281/605 (46%), Gaps = 89/605 (14%)
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
ALQI PS + + +F ++N T G LL +W +P+ D+ + R +
Sbjct: 10 ALQIL---PDPSKVFSKSKSQKSCLFDLVNYTATSEGYLLLMDWVRKPLADITLIMERQS 66
Query: 242 AISFFL----------CSEEL-----MASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
I + CS+ + M ++ +K + + +NS I +
Sbjct: 67 MIRYLSSGVFGHDNRGCSQIVTILRSMKGCFAKVRRLKTNEMLWQCWNS--LILLLRNSV 124
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
+K + ++V ++ E +S S LLN D+ EL + LVI I
Sbjct: 125 LIVKLLRQHINVEELHESSLSMSF-----LLNEDLFA------FQELERIIHLVIAI--- 170
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC---- 402
S E+G ++R+G E+D LR IY L L+ C + C
Sbjct: 171 ELSAEEG-KIIIRDGVDAEIDRLRSIYNNLDSILQT------------CTKNISECYPGI 217
Query: 403 ---IVYIHQIGYLMC------IFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
+YI Q+G+L+ + D L FA S L+Y +P+ R
Sbjct: 218 GFNTIYIPQLGFLVSREITHNVITHDTTDVCLPSDWKEVFATS------THLYYKSPEVR 271
Query: 454 ELDNLLGDIYHKILDMERAITRDLV-SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
++D+ GD++ I+D E I + L + ++ L+ + ELDC SLA V+
Sbjct: 272 QMDDAYGDVHTLIIDREIEIIQLLQEKEVDKYASTLVDTMLALTELDCLCSLATVSQLPG 331
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDG------RINIITGPNYSGKS 566
Y P LT L ++ RH L E ++ F+PND + RI ++TG N+SGKS
Sbjct: 332 YKFPKLTTGYDLCLKQSRHPLVETYLNLFVPNDVEFSDQEEEEEEERIMVLTGANFSGKS 391
Query: 567 IYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAEQ-----SSFMIDLHQVGMML 618
+++ Q+ALI L+ +G +PA +G+ D ++ ++ E S+F ID++Q+ +
Sbjct: 392 VFLNQIALITVLAQLGCAIPAQLGVIGVVDMLLTRILSRESLEKHLSTFAIDINQLSKCI 451
Query: 619 RQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL-----LNE 673
AT +SL L+DEFGKG+ + D L GG I+Y PP+ ++ TH EL L
Sbjct: 452 TLATDKSLILVDEFGKGSDSIDSPALFGGAISYLARMSSPPRCIMSTHYLELFRDHWLAN 511
Query: 674 GCLPKSERLKFYTMSV-LRPE--NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAE 730
L +++R+K+ +M + L+P+ N+ V+ I +LY++ G A S+G+HCA +P +
Sbjct: 512 NILSENKRVKYVSMQISLQPDLPLNTQHVDSIKYLYKVKAGVAADSFGIHCAKFCDLPQQ 571
Query: 731 VIKRA 735
+I RA
Sbjct: 572 IINRA 576
>gi|335429545|ref|ZP_08556443.1| DNA mismatch repair protein MutS [Haloplasma contractile SSD-17B]
gi|334889555|gb|EGM27840.1| DNA mismatch repair protein MutS [Haloplasma contractile SSD-17B]
Length = 864
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 302/599 (50%), Gaps = 71/599 (11%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S++++LK+D + L+I +T + + G S+ ++++ T MG RL++ W
Sbjct: 253 SVHEYLKMDVYSKRNLEISETLRSKTRKG--------SLLWLVDQSQTAMGGRLIKQWLD 304
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTA 287
RP++D + ++ R + + F+ + ++LK V D+ ++ + + Y ++
Sbjct: 305 RPLIDKQAISRRYDIVQAFIDDFITREEIKKSLKNVYDLERLVGRIS-----YGTANARD 359
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
++ SL + I +EQL+ LN ++ + + + ++ + ++D +
Sbjct: 360 LMQLKSSLSEIPFI---------KEQLKTLN----KEQKTDVNLDFD-TFDPLFDLLDES 405
Query: 348 RSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
++E G L+++GF +ELD+LR +++ E+ + E + K + V
Sbjct: 406 INEEAPISLKDGGLIKDGFNEELDKLRDASTNGRKWIAELVAKEKERTG--IKSLKVG-- 461
Query: 404 VYIHQIGYLMCIFEEKL----DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ GY + I + + +D+ E+ Q T + TP+ +E ++++
Sbjct: 462 -FNKVFGYYIEIRKTNMHLLPEDSNYERKQTL----------TNSERFITPELKEKESMI 510
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K + +E + + + + + L K AE+D +S +LV+ +N ++RP LT
Sbjct: 511 LGADEKAMSLEYELFVSIRDKVKQYMNELQKLAKRIAEIDALISFSLVSEENRFVRPKLT 570
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DI+NGRH + E M ++ ND +D + + +ITGPN SGKS Y++Q+AL V
Sbjct: 571 DKRHVDIKNGRHPVVEKVMKDSVYVENDVTMDGNTDLLLITGPNMSGKSTYMRQMALTVI 630
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ +G FVPAD+AT+ + D S + + QS+FM+++ + + AT+ SL +
Sbjct: 631 LAQVGCFVPADSATLPIFDKIFTRIGASDDLISGQSTFMVEMLEANNAILNATADSLIIF 690
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMS 688
DE G+GT T DG+ L I Y + ++ K + TH EL N L +S +RLK +
Sbjct: 691 DEIGRGTATYDGMALAQSIIEY-IHENIKAKTMFSTHYHELTN---LEESLKRLK--NVH 744
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
V E+N ++ FL+++ G SYG+ A LA +P +IKR+ +L+ ++NK
Sbjct: 745 VKAKEDNG----ELTFLHKVEFGPTDKSYGIQVAKLAELPVTLIKRSEAILKRLESNKE 799
>gi|390441990|ref|ZP_10230012.1| DNA mismatch repair protein mutS [Microcystis sp. T1-4]
gi|389834709|emb|CCI34138.1| DNA mismatch repair protein mutS [Microcystis sp. T1-4]
Length = 882
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 199/769 (25%), Positives = 336/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYSDISTGEFYTTQA-----SDLTALSLELSRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQNIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VSYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ +E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNKLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|315037642|ref|YP_004031210.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL
1112]
gi|325956127|ref|YP_004286737.1| DNA mismatch repair protein MutS [Lactobacillus acidophilus 30SC]
gi|312275775|gb|ADQ58415.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL
1112]
gi|325332692|gb|ADZ06600.1| DNA mismatch repair protein MutS [Lactobacillus acidophilus 30SC]
Length = 866
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 277/587 (47%), Gaps = 63/587 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 250 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + + + +
Sbjct: 302 PLLNVDEINHREEMVQALLDGYFTRENAIDALKGVYDLERLTGRI-----AFGNVNAREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + L + ++E A I L V E++ + +
Sbjct: 357 LQLSRSLQAVPVILDA---------LNQSDSQVLEDFAQKIDP-LKGVAEMISTTLVKDP 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYI 406
G L+REG +LD + ++L ++ + E + + +L + Y
Sbjct: 407 PILTTEGGLIREGVDKQLDRYKDAMNNGKKWLAQMEADERQKTGIDNLK-------VGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + L++ ++ T Y TP+ +E +NL+ + +
Sbjct: 460 KVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLD 525
D+E + L + + L K A LD + A VA QNNY RP T +D
Sbjct: 513 TDLEYDLFVKLREEVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPHFHTDNQDID 572
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI ++ +GS
Sbjct: 573 VVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAIMAQVGS 632
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+G
Sbjct: 633 FVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRG 692
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPE 693
T T DG+ L G + Y V K L TH EL L+E + LK + V E
Sbjct: 693 TATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTALDETL----DHLK--NIHVGATE 745
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 746 ENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLK 788
>gi|331001789|ref|ZP_08325311.1| DNA mismatch repair protein MutS [Lachnospiraceae oral taxon 107
str. F0167]
gi|330412763|gb|EGG92146.1| DNA mismatch repair protein MutS [Lachnospiraceae oral taxon 107
str. F0167]
Length = 882
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 278/588 (47%), Gaps = 70/588 (11%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ +T + G S+ G+++K T MG R+LR++ +P++
Sbjct: 265 YMIVDTASRRNLELVETMREKKKSG--------SLLGVLDKTNTAMGARMLRSFLEQPLV 316
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW---TAF 288
+ E + R +A++ L E L V D+ ++ + + S D +A
Sbjct: 317 NREKIIGRQDAVAELFDRYIDREELREYLNPVYDLERLMSRVVTKS--ANTRDLLSLSAS 374
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+K I + V K FE + E N D +E I + L +
Sbjct: 375 MKMISPIKDVLKTFEAKEIKRTDE-----NLDRLEDIIDIIDRAINEDSPLSL------- 422
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
KE G ++ G+ E+D+LRQ E +L ASLE + + I +
Sbjct: 423 -KE---GNIINTGYNAEIDKLRQAKTEGKNWL---ASLESEEKEKTGIKNLK--IKFNKV 473
Query: 409 IGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
GY + F+ + D F T Y T K ++L+N++ K
Sbjct: 474 FGYYFEVTNSFKNMVPDY-----------FVRKQTLTNAERYTTDKLKDLENIILGAEDK 522
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLD 525
+ +E I ++ I + + + A +D SLA VA+ NNY RP + ++D
Sbjct: 523 LNSLEYEIFVEVREEIANNVNRIQSSAKSIAYIDAICSLATVAYNNNYARPEINTTGIID 582
Query: 526 IQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I++GRH + E + D+FI NDT +D N R++IITGPN +GKS Y++Q ALI ++ IG
Sbjct: 583 IKDGRHPVVETMLKDDSFIVNDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICMMAQIG 642
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA A++ + D S + + QS+FM+++ +V +LR AT SL +LDE G+
Sbjct: 643 SFVPAKKASLCVCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVILDEIGR 702
Query: 635 GTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRP 692
GT T DG+ + + + + K L TH EL EG LP + Y +SV
Sbjct: 703 GTSTFDGLAIAWAVVEHISNVKLIGAKTLFATHYHELSELEGTLPG---VNNYCISV--K 757
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
EN ++IVFL +++ G A SYG+ A LAGVP V RA ++E
Sbjct: 758 ENG----DNIVFLRKIITGGADKSYGIQVAKLAGVPESVTNRAKELIE 801
>gi|322371540|ref|ZP_08046086.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
gi|320548831|gb|EFW90499.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
Length = 895
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 185/650 (28%), Positives = 295/650 (45%), Gaps = 68/650 (10%)
Query: 122 MDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAH 180
+D G +VRA+G +L+ +E E+G + ++ + + ++LDAT
Sbjct: 224 LDSGDGAEVRAAGAVLSYVE-----------ETGAGVLGSMTRLQSYHADDHVELDATTQ 272
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
L++ +T H G S+F ++ T GRRLL+ W RP + L R
Sbjct: 273 RNLELTET-MHGDRKG--------SLFETVDHTKTSAGRRLLKEWLQRPRRSPDALRERQ 323
Query: 241 NAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNK 300
++++ F S + ETL D+ + K S S A D S+ L V
Sbjct: 324 SSVAAFAESALAREEIRETLADAYDLERLASKAVSGS--ADAHDLLRVRDSLAVLPTVAD 381
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
S S L++ E+ V E + G L+R
Sbjct: 382 AVANAPSLSGSPLAELVSRPNREEVERLREELAEAVAEDPPNTVT--------QGGLLRR 433
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEE 418
G+ +ELD++ +EE E+ + +A E + + HL + GY + + +
Sbjct: 434 GYDEELDDIIDSHEENLEWFDTLADREKSRTGISHLQ-------VDRNKTDGYYLQVGKS 486
Query: 419 KLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLV 478
D E +E + + E Y T + RE + + + + ++E + +L
Sbjct: 487 DTDKVPEE----YEAVKTLKNSER----YVTDELREREREILRLEERRGELEYELFGELR 538
Query: 479 SHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV 538
+ ++ L AELD SLA+ A +N ++RP L +E LDI+ GRH + E T
Sbjct: 539 ERVAEHAELLQDVGRTLAELDVLASLAVHAVENGWVRPEL-VESGLDIEQGRHPVVERTT 597
Query: 539 DTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS- 597
+ F+PND R+D+D I+TGPN SGKS Y++QVALI L+ +GSFVPA +A +G+ D
Sbjct: 598 E-FVPNDVRMDDDREFLIVTGPNMSGKSTYMRQVALITLLAQVGSFVPARSARIGVVDGI 656
Query: 598 -------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTIN 650
+ +S+FM+++ ++ +L A+ SL +LDE G+GT T DGI +
Sbjct: 657 FTRVGALDELAQGRSTFMVEMQELSNILHSASEDSLVILDEVGRGTATYDGISIAWAATE 716
Query: 651 YFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVP 710
Y +V K L TH EL ER++ + V E + D+ FL +
Sbjct: 717 YL-HNEVRAKTLFATHYHELTT--LADHLERVE--NVHVAADERDG----DVTFLRTVRD 767
Query: 711 GHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE-RWSHENISAQ 759
G SYG+H A LAGVP V++R+ VL+ + K +E R S N S Q
Sbjct: 768 GPTNRSYGIHVADLAGVPMPVVERSRDVLDKLRQEKAIEARGSGSNESVQ 817
>gi|402838548|ref|ZP_10887053.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium OBRC8]
gi|402272762|gb|EJU21978.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium OBRC8]
Length = 851
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/587 (27%), Positives = 289/587 (49%), Gaps = 74/587 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R +++F ++NK T MG RLL+ + L+P+ D + RLN +S F+ + +
Sbjct: 272 RKNNSYTLFWVLNKANTSMGSRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSH 331
Query: 259 TLKYVKDIPHILKKFNSPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L+ V D+ I S +Y + D KS+ ++ + IF+ G ++S E+L
Sbjct: 332 ILREVYDLERI-----SNRIVYDTVSHRDLLNLKKSLKAVNEIKNIFK-GENDSRFEEL- 384
Query: 316 LLNFDIVEKAASCITTELAYVYELV-IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYE 374
++++ K +L + L+ I ++ +K + +++ + ++L R + E
Sbjct: 385 ---YEVLSK------NDLMPIINLIEKSIEEIGEDFKKEH--IIKSSYDEKLAYYRDLLE 433
Query: 375 ELPEFL--EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
L E E + +L I Y GY + I T LQ F
Sbjct: 434 NTSNILIKMERDEREKTGIKNL-------KISYNKVFGYYIEI--------TKAALQNF- 477
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL-------DMERAITRDLVSHICLFS 485
+M + +R R ++N L I ++L +E ++ +++ + F
Sbjct: 478 ----NMPSDYERRQTLVSSERFINNNLKKIEEEMLSAKQGESQLESSLYKEVKEELKNFI 533
Query: 486 DHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIP 543
+++ +++D + +LA A +N+Y++P+++ + + I+NGRH + E + + ++P
Sbjct: 534 PKIMQVAEMISQIDVYTALAKTAIENDYVKPMISTDGNIVIKNGRHPVIEKLLPNEEYVP 593
Query: 544 NDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH---- 599
NDT + +IITGPN +GKS Y++QVA+I+ ++HIGS+VPA A + + DS +
Sbjct: 594 NDTDL-TSSETHIITGPNMAGKSTYMRQVAIIMLMAHIGSYVPASFAQIPIIDSIYTRIG 652
Query: 600 ----MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTC 655
++ QS+FM+++ +V +L+ AT SL +LDE G+GT T DG+ L + Y C
Sbjct: 653 ASDDLSMGQSTFMVEMTEVSNILKNATQNSLIILDEIGRGTSTYDGMSLAFSIVEYI--C 710
Query: 656 D-VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHAL 714
+ + K LV TH EL K + +K Y M V D ++I FL ++V G A
Sbjct: 711 EHIKAKTLVSTHYHELT--ALESKYKNIKNYCMLV-------DDSKEIKFLRKIVLGKAD 761
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
SYG+H A LA +P EV++RA +L + ++ + S QDQ
Sbjct: 762 KSYGIHVAQLADLPYEVLERANIILSKLETSEKKSSKKYNQKSEQDQ 808
>gi|20089412|ref|NP_615487.1| DNA mismatch repair protein MutS [Methanosarcina acetivorans C2A]
gi|44888230|sp|Q8TTB4.1|MUTS_METAC RecName: Full=DNA mismatch repair protein MutS
gi|19914310|gb|AAM03967.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 900
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 176/593 (29%), Positives = 287/593 (48%), Gaps = 58/593 (9%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S++ +N TPMG R L+ W L+P+L +E +N RL+AI L + + L V+
Sbjct: 305 SLYRTLNCTRTPMGNRTLKKWLLKPLLSVEKINPRLDAIEELAEDSLLRYDIRDWLSDVR 364
Query: 265 DIPHILKKFNSPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQL-RLLNFD 320
DI ++ + +Y +A D A KS+ G+ SLR+ L F+
Sbjct: 365 DIERLVGRI-----VYGNASARDLVALKKSL------------GVVPSLRDSLLEKARFE 407
Query: 321 IVEKAASCITT--ELAYVYELV-IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELP 377
++++ A + + EL + E++ I I+D + G +++ G+ ELDELR I
Sbjct: 408 MLKEIAEGLASFSELEELAEMIEIAIMDEPPVSVR-EGGMIKSGYSPELDELRDISSNSK 466
Query: 378 EFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
+++ E + K + V Y GY + + + ++ A ++
Sbjct: 467 QWIAAFQQKERER--SGIKSLKVG---YNKVFGYYIEVTHANSSQVPEDYIRKQTMANAE 521
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
R F TP+ +E ++L+ K + +E I ++ + S L +
Sbjct: 522 ------RFF--TPELKEKESLILTANEKAVALEYEIFAEITRTLSARSRELQETAERIGT 573
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-FIPNDTRID-NDGRIN 555
LD SLA NNY RP LT + + I++GRH + E TV F+PNDT +D + +
Sbjct: 574 LDVLASLAEATENNNYTRPQLTEDCKILIRDGRHPVVESTVSGGFVPNDTEMDCKENQFL 633
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSF 607
++TGPN +GKS Y++Q ALI ++ +GSFVPA A+VG+ D + + QS+F
Sbjct: 634 LVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASVGIIDQVFTRIGAFDDLASGQSTF 693
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTH 666
M+++ ++ +L A+ +SL LLDE G+GT T DG + + + V + L TH
Sbjct: 694 MVEMVELANILNNASPKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGIRALFATH 753
Query: 667 LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAG 726
+L K +R+K Y ++V D ++VFL ++VPG SYG+H A LAG
Sbjct: 754 YHQLT--ALEEKLKRVKNYHIAV------KEDGHELVFLRKIVPGATDRSYGIHVARLAG 805
Query: 727 VPAEVIKRAAYVL-EAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVLKG 778
VP +VI+RA +L E + N E EN + + +ML FD G
Sbjct: 806 VPEKVIERANEILKELERENVLEEAEDGENGKKKKSKATARYTQMLLFDPGSG 858
>gi|340622702|ref|YP_004741154.1| DNA mismatch repair protein mutS [Capnocytophaga canimorsus Cc5]
gi|339902968|gb|AEK24047.1| DNA mismatch repair protein mutS [Capnocytophaga canimorsus Cc5]
Length = 855
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 277/580 (47%), Gaps = 56/580 (9%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G + + ++ +++K ++ MG R L+ W P+ D+ + R +S F+ +++ +
Sbjct: 269 GTSSQSVTLLDVIDKTISAMGSRTLKRWLALPLKDIAKIKQRHEVVSHFMGHIDVLQKIK 328
Query: 258 ETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL 317
E + DI ++ K + T + S+ + + +I + L
Sbjct: 329 EHISKTSDIERLISKVATGKI--TPREVVQLKNSLEMIPPIKEICNQAKNHDLNA----- 381
Query: 318 NFDIVEKAASC--ITTELAYVY--ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
+ +K SC + ++A E + I+ G ++EG ELDELR++
Sbjct: 382 ---LADKLHSCEELCNQIAVTLNEEAPVNILK---------GNAIKEGVSAELDELRKLS 429
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
+L+E+ E + + I Y + GY + + D + ++
Sbjct: 430 VSGKAYLDEMLKRETEKTG-----ISSLKIDYNNVHGYYIEVRNTHKDKVPQDWIRKQTL 484
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVN 493
++ R KT E +LG KI +E+AI +L+ I + + +
Sbjct: 485 VNAE------RYITEELKTYEA-KILG-AEEKIAQLEQAIFAELIISIGNYIAQVQQNAT 536
Query: 494 FAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIP---NDTRIDN 550
+LDC A +A +NNY RP + +LDI++GRH + E + +P ND +D
Sbjct: 537 LIGQLDCLCGFASLALENNYNRPEMDESFILDIKDGRHPVIEKQLPVGVPYIANDVYLDR 596
Query: 551 DGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMT 601
D + I +ITGPN SGKS ++Q ALIV L+ IGSFVPAD+A +G+ D S +++
Sbjct: 597 DSQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPADSARIGIVDKIFTRVGASDNIS 656
Query: 602 AEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV 661
+S+FM+++++ ++L + +SL LLDE G+GT T DGI + Y K
Sbjct: 657 MGESTFMVEMNEAALILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYLHEHPSKAKT 716
Query: 662 LVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHC 721
L TH E LNE ER+K + +SV ++N ++F+ +LV G + S+G+H
Sbjct: 717 LFATHYHE-LNE-MTDSFERIKNFNVSVKETKDN------VLFIRKLVSGGSAHSFGIHV 768
Query: 722 ALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
A +AG+P VI++A +L+ +++ E S + SAQ +
Sbjct: 769 AKMAGMPQFVIQKANKMLKKLESSHASEDTSQKLKSAQKE 808
>gi|385816997|ref|YP_005853387.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL1118]
gi|327182935|gb|AEA31382.1| DNA mismatch repair protein MutS [Lactobacillus amylovorus GRL1118]
Length = 866
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 277/587 (47%), Gaps = 63/587 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 250 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + + + +
Sbjct: 302 PLLNVDEINHREEMVQALLDGYFTRENAIDALKGVYDLERLTGRI-----AFGNVNAREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL V I + L + ++E A I L V E++ + +
Sbjct: 357 LQLSRSLQAVPVILDA---------LNQSDSQVLEDFAQKIDP-LKGVAEMISTTLVKDP 406
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYI 406
G L+REG +LD + ++L ++ + E + + +L + Y
Sbjct: 407 PILTTEGGLIREGVDKQLDRYKDAMNNGKKWLAQMEADERQKTGIDNLK-------VGYN 459
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + L++ ++ T Y TP+ +E +NL+ + +
Sbjct: 460 KVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRS 512
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLD 525
D+E + L + + L K A LD + A VA QNNY RP T +D
Sbjct: 513 TDLEYDLFVKLREEVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPHFHTDNQDID 572
Query: 526 IQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
+ NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI ++ +GS
Sbjct: 573 VVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAIMAQVGS 632
Query: 584 FVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+G
Sbjct: 633 FVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRG 692
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPE 693
T T DG+ L G + Y V K L TH EL L+E + LK + V E
Sbjct: 693 TATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTALDETL----DHLK--NIHVGATE 745
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 746 ENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLK 788
>gi|284165652|ref|YP_003403931.1| DNA mismatch repair protein MutS [Haloterrigena turkmenica DSM
5511]
gi|284015307|gb|ADB61258.1| DNA mismatch repair protein MutS [Haloterrigena turkmenica DSM
5511]
Length = 893
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 185/666 (27%), Positives = 315/666 (47%), Gaps = 104/666 (15%)
Query: 124 MGSEVQVRASGGLLAVLE---------------NERIVDTLEQKESGNASITIDSVIEVS 168
+ + ++RA G LLA E ER+ E G+A ++ + +++
Sbjct: 220 LAGDAEIRACGALLAYAEYVRGGEHEGERGESDEERVEAVFE----GDAEQRLEYITQLT 275
Query: 169 L---NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNW 225
++L LDA A +L++F+ P + ++ ++ G++++ + +G R LR+W
Sbjct: 276 RYDPREYLLLDAVALRSLELFE----PRTV---HGRDDATLVGVLDETASALGGRKLRDW 328
Query: 226 FLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
RP+L+ + +R +A++ + + LH+ L+ V D+ ++ + + A D
Sbjct: 329 IRRPLLEPARIEARHDAVAELKSAVQTRERLHDRLREVYDLERLIGRISRER--ANARDL 386
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
+ ++ + + + E LRE LR N D + I E A V E I I +
Sbjct: 387 RSLRDTLAVVPEIREQLADADCERLRE-LRE-NLDPLTDVRELI--EDAVVAEPPIEITE 442
Query: 346 VNRSKEKGYGTLVREGFCDELDELR-------QIYEELPEFLEEVASLELVQLPHLCKEM 398
G ++ EG+ + LD+LR Q ++L E E + +++ H
Sbjct: 443 ---------GGIIAEGYDENLDDLRGTARDGKQWIDDLEERERERTGIGSLKVGHNS--- 490
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
+H GY + + LD + E Q + + ++R TPK +E ++
Sbjct: 491 -------VH--GYYIEVTNPNLD-SVPENYQRRQTLKN-----SERFV--TPKLKEREDE 533
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
+ + + E + + S I + + + A LD +SLA VA Q +Y RP +
Sbjct: 534 IVGAQQRADEREYELFCAVRSEIAAEVERVQGLADAIATLDALVSLATVAAQYDYCRPEM 593
Query: 519 -------TLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQ 571
LE +DI+ GRH + E T ++F+PND + +D R+ +ITGPN SGKS Y++Q
Sbjct: 594 LERDDHEGLE--IDIEGGRHPVVERTQESFVPNDANLTHDRRLAVITGPNMSGKSTYMRQ 651
Query: 572 VALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATS 623
VA IV L+ +GSFVPA +A + D S + +S+FM+++ ++ +LR+A
Sbjct: 652 VAQIVLLAQVGSFVPARSARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREADE 711
Query: 624 QSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSE 680
+SL LLDE G+GT T DG+ + I V V L TH LTEL ++ L +
Sbjct: 712 RSLVLLDEVGRGTSTADGMA-IAQAITEHVHDRVGATTLFATHHHPLTELADD--LEAAF 768
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA-AYVL 739
L F E + D E +VF + + PG A SYG+ A AGVP V++R+ V
Sbjct: 769 TLHF--------EVDEDDGE-VVFHHEIAPGAATGSYGVEVATAAGVPETVVERSRELVA 819
Query: 740 EAAQNN 745
EAA ++
Sbjct: 820 EAAGDD 825
>gi|336053622|ref|YP_004561909.1| DNA mismatch repair protein mutS [Lactobacillus kefiranofaciens
ZW3]
gi|333956999|gb|AEG39807.1| DNA mismatch repair protein mutS [Lactobacillus kefiranofaciens
ZW3]
Length = 865
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 275/585 (47%), Gaps = 59/585 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 249 VNQYLQMSHVVQNNLELIASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + + + LK V D+ + + + A +
Sbjct: 301 PLLNVDQINHREEMVQALFEGYFTRENTIDALKGVYDLERLTGRIAFGNV--NARELLQL 358
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
+S+ ++ + SE L + + + D ++ A I+T L L+
Sbjct: 359 SRSLQAVPVILDALNQSDSEVLEDYAK--DIDPLKGVAEMISTTLVKDPPLLTT------ 410
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G L++ G +LD R ++L A +E + E + Y
Sbjct: 411 -----EGGLIQPGVDKQLDRYRDAMNNGKQWL---AQMEADERQKTGIENL--KVGYNKV 460
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + L++ ++ T Y TP+ +E +NL+ + + D
Sbjct: 461 FGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRSTD 513
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLDIQ 527
+E + L + + L K N A LD + A VA QNNY RP T +++
Sbjct: 514 LEYDLFVKLREEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPTFHTDNQDINVV 573
Query: 528 NGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
NGRH + E MT ++IPND ++D+ I +ITGPN SGKS Y++Q+ALI ++ +GSFV
Sbjct: 574 NGRHPVVEKVMTAGSYIPNDVKMDSATDIFLITGPNMSGKSTYMRQMALIAIMAQVGSFV 633
Query: 586 PADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTL 637
PAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 634 PADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGTA 693
Query: 638 TEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENN 695
T DG+ L G + Y + V K L TH EL L+E + LK + V E N
Sbjct: 694 TYDGMALAGAIVKY-LHDKVGAKALFATHYHELTALDETL----DHLK--NIHVGATEEN 746
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 747 GK----LIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLK 787
>gi|303233668|ref|ZP_07320322.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
gi|302495102|gb|EFL54854.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
Length = 856
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 171/607 (28%), Positives = 281/607 (46%), Gaps = 89/607 (14%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+S + +N+F+++D+ + L+I + S G S+FG++N T MG R
Sbjct: 245 INSSRKYYINEFMEIDSNSVINLEIQKNLYTNSKNG--------SLFGVLNHTKTSMGSR 296
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL ++ RP++D E + R N + EL+ +L L + D+ +L K + S
Sbjct: 297 LLHSYLERPLMDKEEILIRQNRVEEIFEDYELLVNLENCLDGIYDLDRLLAKLSYKS--A 354
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGIS---------ESLREQLRLLNFDIVEKAASCITT 331
A D A SI + H+ + + LR+ L+N IV+ +T
Sbjct: 355 NAKDLIALKVSIEKIPHLKNLLNCNKKNIQLIGEKLDDLRDIYDLINKSIVDDPPVILTE 414
Query: 332 ELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR----QIYEELPEFLEEVASLE 387
G L++ F +ELD+LR EL E+ E++ +
Sbjct: 415 -----------------------GNLIKPNFSNELDQLRYNRVNGKNELVEY--EMSEKD 449
Query: 388 LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFY 447
+ + +L IV+ ++GY + D T L + T +
Sbjct: 450 RLGIKNLK-------IVFNKKLGYFI--------DVTKSNLNKVGEDYEKRQTLTNSSRF 494
Query: 448 HTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALV 507
T + +++ + D +I ++E I D+ I + K+ + A +D SLA
Sbjct: 495 KTKELEAIESKILDSEDEIFELEYKIFEDIRKIILENLSRIKKSADLIAIIDVSNSLAKC 554
Query: 508 AHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSG 564
A+ NNY++P + L+D+ RH + E++V FI ND I I +ITGPN SG
Sbjct: 555 AYLNNYIKPDINTYGLIDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSG 614
Query: 565 KSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGM 616
KS Y++QVALI L+ IGSFVPA A + + D S ++ +S+FM+++ ++
Sbjct: 615 KSTYLRQVALICILNQIGSFVPATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSN 674
Query: 617 MLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNE 673
+++ ATS SL +LDE G+GT T DG+ L + Y ++ ++ K L TH LTEL
Sbjct: 675 IIKYATSNSLLVLDEIGRGTSTFDGLSLAWAIVEY-ISKNIKAKTLFATHYHELTEL--- 730
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
+ + M V E N + I+FL ++ G SYG+ A LAG+P +IK
Sbjct: 731 ----EKKLDNLINMKVDIKETNDS----IIFLRKITRGSTDKSYGIEVAELAGMPKTLIK 782
Query: 734 RAAYVLE 740
RA +L+
Sbjct: 783 RAKSILK 789
>gi|219851578|ref|YP_002466010.1| DNA mismatch repair protein MutS [Methanosphaerula palustris E1-9c]
gi|219545837|gb|ACL16287.1| DNA mismatch repair protein MutS [Methanosphaerula palustris E1-9c]
Length = 874
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/561 (28%), Positives = 273/561 (48%), Gaps = 61/561 (10%)
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLH 257
G AK+G ++ ++++ T MG RLL++ + P+L+ E + RL+A+SFF+ + + +
Sbjct: 289 GEAKDG-TLLSVLDRTGTSMGARLLKSCLVSPLLNREQIEERLDAVSFFVDHPMVRSEVR 347
Query: 258 ETLKYVKDIPHILKKF----NSPSFIYTASDWTAFLKSICSLL---HVNKIFEVGISESL 310
L DI I + +P + T + L I SLL V EV + +
Sbjct: 348 SLLHRSADIERIAGRIAYGSATPRDLVTLNRSLTVLPMISSLLSDPEVTVPAEVATAVAG 407
Query: 311 REQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELR 370
E + D++E+A ++D + + G ++R+G+ + LD R
Sbjct: 408 IEDPGSIT-DLIERA-----------------LVDDPPANTRN-GGMIRDGYDETLDHFR 448
Query: 371 QIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
+ +++ L+L Q + I Y GY + + + E
Sbjct: 449 SLSGSGKDWI-----LDLQQKERERTGIRTLKIAYNRVFGYYIEVTKANAALVPAE---- 499
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
++ + +GE Y TP RE + + + +L+ E + L++ + L +
Sbjct: 500 YDRKQTTTNGER----YTTPALREQEQQIAEAEEHLLERETMLFAALLTSLAGSVPMLQQ 555
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPNDTRID 549
A LD + +LA VA Q+ + RP++ EP + I+ GRH + E V+ FIPNDT +D
Sbjct: 556 NAASVAWLDLYSALAEVAVQDGFTRPVIIDEPKVLIRGGRHPVVEQHVEGGFIPNDTSMD 615
Query: 550 N-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHM 600
+ +I IITG N +GKS Y++ +A++ ++ +GSFVPAD AT+GL D +
Sbjct: 616 GAEEQILIITGANMAGKSTYMRSLAILCIMAQMGSFVPADHATIGLVDRVFTRVGAFDDL 675
Query: 601 TAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPP 659
QS+FM+++ ++ +L T QSL +LDE G+GT T DG + + + P
Sbjct: 676 ARGQSTFMVEMVELANILNHVTPQSLVILDEIGRGTSTVDGYSIARAVLEFLHGKGKSGP 735
Query: 660 KVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYG 718
+ L TH EL++ E L +R++ Y ++V + TDV +F +L+PG SYG
Sbjct: 736 RTLFATHFHELVDVEATL---KRVRNYHLAV---QETGTDV---IFTRQLIPGATDKSYG 786
Query: 719 LHCALLAGVPAEVIKRAAYVL 739
+H A LAGVP +V RA +L
Sbjct: 787 IHVATLAGVPRKVTDRATAIL 807
>gi|115299204|sp|Q5UZG9.2|MUTS1_HALMA RecName: Full=DNA mismatch repair protein MutS 1
Length = 921
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 220/782 (28%), Positives = 352/782 (45%), Gaps = 96/782 (12%)
Query: 4 YMACILH------GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
Y+A ++ G G++ D + Q V ++ +D+++ L ++ + +
Sbjct: 118 YLAAVVREASRDSGDTYGIAATDVTTGQFQVTQL-DDADAGEALTELYTFGPAEILPGPE 176
Query: 58 TKSEESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++++ FL L+ R+D + L S+ F +A H +++E+
Sbjct: 177 LRNDDEFLDRLRERTDAA-----LTLHDSASFEPGRASH--------------TVREQFG 217
Query: 117 --YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
++S+ V VRA+G +L+ +E+ V TL A++T + +
Sbjct: 218 SETVDSVGIGDQNVAVRAAGAVLSYVEDTG-VGTL-------AAVT--RLQAYGERDHVD 267
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDAT L++ +T + S S+F ++ VT G RLL+ W RP +
Sbjct: 268 LDATTQRNLELTETMQGDS---------SGSLFDTIDHTVTAAGGRLLQQWLQRPRRNRA 318
Query: 235 NLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
L R + ++ SE MA + ETL D+ + + S S A D A +++
Sbjct: 319 ELQRRQSCVAAL--SEAAMARERIRETLSDAYDLERLAARATSGS--ADARDLRAVQETL 374
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEK-AASCITTELAYVYELVIGIIDVNRSKE 351
L V V +E L E D ++ AA + EL LV R
Sbjct: 375 ALLGQVADA--VTETERLAESPLADALDGADREAADSLAAELDSA--LVADPPGTVRQ-- 428
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASL--ELVQLPHLCKEMFVPCIVYIHQI 409
G L + G D+LDE+ +E E+LE + E + HL + YI Q+
Sbjct: 429 ---GGLFKRGHDDDLDEIIDEHEAALEWLETLPDREKERTGITHLSVDRNKTDGYYI-QV 484
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
G D E+ Q + + +KR Y TP+ E + + + + DM
Sbjct: 485 GKSET-------DAVPEKYQHIKTLKN-----SKR--YTTPELDEKERDVLRLEERRHDM 530
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + L + + + L AELD F SLA+ A +N++ RP + L I+ G
Sbjct: 531 EYEHFQRLRARVAEHATLLQDVGRTLAELDAFASLAVHAVENDWARPAVVDGNELSIEAG 590
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E T + F+PND +D+D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +
Sbjct: 591 RHPVVEQTTE-FVPNDLYMDDDRQFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARS 649
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
ATVGL D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DG
Sbjct: 650 ATVGLVDGIFTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVGRGTATFDG 709
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG-CLPKSERLKFYTMSVLRPENNSTDVE 700
I + Y V + K L TH EL G LP E + P + +D
Sbjct: 710 ISIAWAATEYIVNS-IQSKTLFATHYHELTALGEELPTVENVHVAVDG--EPRSAGSDG- 765
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE-RWSHENISAQ 759
D+ FL + G SYG+H A LAGVP V+ R+ VL+ +++K +E R S +N
Sbjct: 766 DVTFLRTVRDGPTDRSYGVHVADLAGVPEPVVDRSQAVLDRLRDDKAIEIRGSEQNDGGT 825
Query: 760 DQ 761
Q
Sbjct: 826 TQ 827
>gi|281350300|gb|EFB25884.1| hypothetical protein PANDA_004330 [Ailuropoda melanoleuca]
Length = 1074
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 178/595 (29%), Positives = 283/595 (47%), Gaps = 70/595 (11%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ ++ T L+I Q G S+ +++ T GRR L+ W +P+
Sbjct: 507 EFMTINGTTLRNLEILQNQTDMKTKG--------SLLWVLDHTKTSFGRRKLKKWVTQPL 558
Query: 231 LDLENLNSRLNAISFFLCSE-ELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
L L +N+RL+A+S L SE + + L+ + DI L S + F
Sbjct: 559 LKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGL-----CSIYHKKCSTQEFF 613
Query: 290 KSICSLLHVNKIFEVGISESLREQLR--LLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+ +L H+ F+ I ++ +R LL I+E EL E + I++
Sbjct: 614 LIVKTLYHLKSEFQALIP-AVNSHVRSDLLQTFILE------IPELLSPVEHYLRILNEQ 666
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
+K L ++ + +++ +E+ E +++ + L + K + P I Y+
Sbjct: 667 AAKTGDKTELFKD--LTDFPLIKKRKDEIQEVTDKIQ----IHLQEIRKILKNPSIRYVT 720
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD----GETKRLF-YHTPKTRELDNLLGDI 462
G I +++ + D G TK + +H+P E L +
Sbjct: 721 VSGQEFMI-----------EMKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENYRHLNQL 769
Query: 463 YHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEP 522
+++ A D + + L KAV+ A +DC SLA VA Q +Y RP L E
Sbjct: 770 REQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATIDCIFSLAKVAKQGDYCRPTLQEER 829
Query: 523 LLDIQNGRHVLQEMTV---DTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFL 578
+ I+NGRH + ++ + D ++PN T + D R+ IITGPN GKS YIKQVALI +
Sbjct: 830 KIVIKNGRHPVIDVLLGEQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQVALITVM 889
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ IGS+VPA+ AT+G+ D + ++ QS+FM +L ++RQATSQSL +LD
Sbjct: 890 AQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRQATSQSLVILD 949
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS--ERLKFYTMS 688
E G+GT T DGI + T+ +F+ DV L TH + L KS +++ Y M
Sbjct: 950 ELGRGTSTHDGIAIAYATLEHFIR-DVKSLTLFVTHYPPVCE---LEKSYLQQVGNYHMG 1005
Query: 689 VLRPENNSTD------VEDIV-FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA 736
L E+ S + V D V FLY++ G A SYGL+ A LA VP E++ +AA
Sbjct: 1006 FLVNEDESKEDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILTKAA 1060
>gi|15644466|ref|NP_229518.1| DNA mismatch repair protein MutS [Thermotoga maritima MSB8]
gi|418045777|ref|ZP_12683872.1| DNA mismatch repair protein mutS [Thermotoga maritima MSB8]
gi|6226653|sp|P74926.2|MUTS_THEMA RecName: Full=DNA mismatch repair protein MutS
gi|4982296|gb|AAD36785.1|AE001811_5 DNA mismatch repair protein [Thermotoga maritima MSB8]
gi|351676662|gb|EHA59815.1| DNA mismatch repair protein mutS [Thermotoga maritima MSB8]
Length = 793
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/604 (26%), Positives = 283/604 (46%), Gaps = 71/604 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+S ++ LD+ E L + D+ G ++F ++N TPMG RLL+ W
Sbjct: 244 ISQRDYMILDSATVENLSLIPGDR------------GKNLFDVLNNTETPMGARLLKKWI 291
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
L P++D + + RL A+ + + + L V+D+ I+ + + D
Sbjct: 292 LHPLVDRKQIEERLKAVERLVNDRVSLEEMRNLLSNVRDVERIVSRVEYNRSV--PRDLV 349
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +++ + +N++ L F + +K A + +L+ I+
Sbjct: 350 ALRETLEIIPKLNEV--------------LSTFGVFKKLAFP-----EGLVDLLRKAIED 390
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYI 406
+ G G +++ GF ELDE R + E E L+E E + +++ V Y
Sbjct: 391 DPVGSPGEGKVIKRGFSSELDEYRDLLEHAEERLKEFEEKERERTG--IQKLRVG---YN 445
Query: 407 HQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
GY + + + LD +E + ++ E + TP+ +E + + +I
Sbjct: 446 QVFGYYIEVTKANLDKIP----DDYERKQTLVNSER----FITPELKEFETKIMAAKERI 497
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
++E+ + + + + + LL+ A++D +LA A NY +P+ + E L+I
Sbjct: 498 EELEKELFKSVCEEVKKHKEVLLEISEDLAKIDALSTLAYDAIMYNYTKPVFS-EDRLEI 556
Query: 527 QNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
+ GRH + E F+ ND +DN+ R +ITGPN SGKS +I+QV LI ++ IGSFVP
Sbjct: 557 KGGRHPVVERFTQNFVENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVP 616
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A + + D + +S+F+++++++ ++L ++T++SL LLDE G+GT T
Sbjct: 617 AQKAILPVFDRIFTRMGARDDLAGGRSTFLVEMNEMALILLKSTNKSLVLLDEVGRGTST 676
Query: 639 EDGIGLLGGTINYFVT--CDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENN 695
+DG+ + + C KVL TH TEL E P+ + ++L E
Sbjct: 677 QDGVSIAWAISEELIKRGC----KVLFATHFTELTELEKHFPQVQ-----NKTILVKEEG 727
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHEN 755
++++F +++V G A SYG+ A +AG+P VI RA +LE N +
Sbjct: 728 ----KNVIFTHKVVDGVADRSYGIEVAKIAGIPDRVINRAYEILERNFKNNTKKNGKSNR 783
Query: 756 ISAQ 759
S Q
Sbjct: 784 FSQQ 787
>gi|425472142|ref|ZP_18850993.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
gi|389881833|emb|CCI37648.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
Length = 882
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 201/774 (25%), Positives = 337/774 (43%), Gaps = 117/774 (15%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYSDISTGEFYTTQA-----SDLTALSLELSRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQNIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VSYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----YHTPKTRELDNLLGDIYHKILD 468
+ K D F+ D K+ Y T + +E +N++ ++
Sbjct: 518 SLPRSKAD-------------FAPKDYVRKQTLVNEERYITTELKEKENIILTAVDELNK 564
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I DL + FS + + A LD +LA +A Y RP + L+DI++
Sbjct: 565 LEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKD 624
Query: 529 GRH--VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHI 581
GRH V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+
Sbjct: 625 GRHPVVEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQT 684
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA +A + + D + QS+FM+++++ +L AT +SL LLDE G
Sbjct: 685 GSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIG 744
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + Y T + + + TH EL + E + Y ++V
Sbjct: 745 RGTATFDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELP 801
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ +IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 802 H------EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|354582777|ref|ZP_09001678.1| DNA mismatch repair protein MutS [Paenibacillus lactis 154]
gi|353199069|gb|EHB64535.1| DNA mismatch repair protein MutS [Paenibacillus lactis 154]
Length = 934
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 206/770 (26%), Positives = 346/770 (44%), Gaps = 135/770 (17%)
Query: 4 YMACILH-GHRVGVSYYDSSIRQLHV-------------LEVWEDSN--SDFPLIDIVKY 47
YM C+ G + ++ D S +L+V + ++E S D L++I+
Sbjct: 126 YMVCVTEAGGLLSLAACDLSTGELYVTSVPFSEEWLRDEINIYEPSEIIGDAKLLEIIAS 185
Query: 48 QAQP---QIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTG 104
QA P +++T+ + +R DG LVKS E AW RL
Sbjct: 186 QALPGSRNVVHTAWE---------RREDG--------LVKSQFG--EAAWARLE------ 220
Query: 105 MDDGLSIKERICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSV 164
+ER ++ ++ SE Q R+ G L + D+ E
Sbjct: 221 -------EERRACISLLISYLSETQKRSLGQLTQI-------DSYEP------------- 253
Query: 165 IEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRN 224
+F+ LD L++ +T + R+K+G S+ ++++ T MG RLLR
Sbjct: 254 -----GQFMVLDPFTRRNLELVETVRE-------RSKKG-SLLWLLDQTETSMGARLLRR 300
Query: 225 WFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASD 284
W +P+L + RL A+ L L LK + D+ ++ + S D
Sbjct: 301 WIDKPLLSRARIEERLEAVEHLYNQYILREDLRMALKEIYDLERLVGRIAFGS--ANGRD 358
Query: 285 WTAFLKSICSLLHVNKIFEVGISESLREQLRLL-NFDIVEKAASCITTELAYVYELVIGI 343
A S+ + + ++ S +LR RL D E+ I E A V E + +
Sbjct: 359 LNALKLSLRQVPALKELCAQSTSSTLR---RLAEETDTCEELYQLI--EDAIVDEPPVSV 413
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G +++ G+ + LDELR+ ++ E+ + E + I
Sbjct: 414 RD---------GGIIKPGYHERLDELREASTNGKRWIAELEARE-----RAATGIKSLKI 459
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + ++ + L L + +R + TP+ +E + L+ +
Sbjct: 460 GYNKVFGYYI-----EVTKSNLSSLPEGRYERKQTLANAER--FVTPELKEKEGLILEAQ 512
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K++D+E A+ +L + + L K AE+D + SLA V+ ++ +++P L+
Sbjct: 513 EKMVDLEYALFTELRDKLNMQVSRLQKLAERIAEMDVYQSLAAVSAEHRFVKPELSDGYD 572
Query: 524 LDIQNGRHVLQE--MTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSH 580
++ GRH + E M FI N T + +G I +ITGPN +GKS Y++QVAL+ L+
Sbjct: 573 YIVEGGRHPVVEAVMKDSAFIANGTELRKEGSSILLITGPNMAGKSTYMRQVALLSILAQ 632
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPA+ A + L D + + QS+FM+++ + +M +AT +SL ++DE
Sbjct: 633 IGCFVPAERAVIPLVDRIFTRIGAADDLIGGQSTFMVEMADIQVMTEKATPRSLIIIDEL 692
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLR 691
G+GT T +G+ + I Y V + K LV TH EL + L +S + L Y+M+V
Sbjct: 693 GRGTSTSEGMAIAQAVIEY-VHDHIGCKALVSTHFHELAH---LQESLKGLSNYSMAV-- 746
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
S D + FL +L+PG A SYG++CA LAG+P +I RA +L+
Sbjct: 747 --QESGD--KVHFLRKLIPGAADSSYGIYCARLAGLPGSIIDRAYGLLQG 792
>gi|366162302|ref|ZP_09462057.1| DNA mismatch repair protein MutS [Acetivibrio cellulolyticus CD2]
Length = 872
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 174/635 (27%), Positives = 311/635 (48%), Gaps = 76/635 (11%)
Query: 127 EVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIF 186
++ + ASG LL +E + V+ L+ +S N + + +++ LD L++
Sbjct: 231 DIYINASGALLEYIEQTQKVN-LDHIQSFN---------KYRIEEYMVLDVATRRNLELT 280
Query: 187 QTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFF 246
+T + + G S+ ++++ +T MG R LR W +P++++ ++ R A++ F
Sbjct: 281 ETMREKNRKG--------SLLWVLDRTMTSMGGRTLRKWIEQPLINIYDIRDRHLAVNEF 332
Query: 247 LCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGI 306
+ + E LK V D+ ++ K S A + + SL + +G
Sbjct: 333 KDKFMVRMEVRELLKRVYDMERLMGKIVLGS---------ANCRDLVSLKN-----SIGQ 378
Query: 307 SESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDEL 366
++E L+ LN + +++ I LA ++E++ I G +++EG+ +E+
Sbjct: 379 IPYIKELLKDLNESLNKESNRNIDA-LADIFEIIDKAICDEPPVSVKEGGIIKEGYNEEV 437
Query: 367 DELRQIYEELPEFLEEV--ASLELVQLPHLCKEMFVPCIVYIHQI--GYLMCIFEEKLDD 422
D+L++ + +L E+ + E + +L K F Y ++ Y + +
Sbjct: 438 DKLKRASVDGKTWLVELENSEREKTGIKNL-KVGFNKVFGYYLEVTKSYFSLVPPNYIRK 496
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
TL + R K E D +LG K++++E I ++ + +
Sbjct: 497 QTLANCE--------------RFITEELKVIE-DTVLG-AEDKLVELEYQIFVEVRNKVA 540
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT-- 540
+ + A++D SLA VA + +Y P + E ++ I +GRH + E +D
Sbjct: 541 GEITRIKRTAKALAQVDVICSLAEVADRESYTMPEINNEDVIHITDGRHPVVEKMIDQGE 600
Query: 541 FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--- 596
F+PNDT ++ ++ +I IITGPN +GKS Y++QVALIV ++ IGSFVPA +A +G+ D
Sbjct: 601 FVPNDTYLNMSEDQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIF 660
Query: 597 -----SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINY 651
S + A QS+FM+++ +V +L ATS+S+ +LDE G+GT T DG+ + I +
Sbjct: 661 TRVGASDDLAAGQSTFMVEMSEVANILSNATSRSILILDEIGRGTSTYDGLSIAWSVIEH 720
Query: 652 FVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLV 709
+ + L TH EL EG + + +K Y +SV EDI+FL +++
Sbjct: 721 ISDRKRIGARTLFATHYHELTELEGSI---DGVKNYCISV------EEKGEDIIFLRKII 771
Query: 710 PGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
G A SYG+ A LAGVP VI RA +L+ ++
Sbjct: 772 RGGADNSYGIQVARLAGVPVPVINRAKEILKELED 806
>gi|384109603|ref|ZP_10010474.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
gi|383868827|gb|EID84455.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
Length = 880
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 168/620 (27%), Positives = 295/620 (47%), Gaps = 79/620 (12%)
Query: 145 IVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEG 203
++D LE+ + NASI ++S+ ++FL +D ++ L+I + ++G
Sbjct: 244 LLDYLEK--TTNASIPHVNSIRLYQDSEFLMMDDSSRRNLEITEN-----------MRDG 290
Query: 204 FSVFGMMNKCV----TPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHET 259
S F ++ +CV T MG RLLRNW L P+ +L + R N +S F+ + +L+ +
Sbjct: 291 TSQFSLL-ECVDYTKTAMGSRLLRNWLLFPLTNLRQIEDRQNRVSNFVENRQLLEKVKAD 349
Query: 260 LKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNF 319
L + D+ + + A D A S+ + + +E L +F
Sbjct: 350 LSQILDVERLSGRIAMEK--AHAKDLQALRLSLEAWCKI------------KEYLNQYDF 395
Query: 320 DIVEKAASCITTELAY-VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPE 378
S ++++ +Y + EL+ I N + G ++ +G+ +ELD RQI++
Sbjct: 396 -------SFVSSDDSYKICELIKKSILDNPATSLTEGGIINQGWSEELDHWRQIHDNFNL 448
Query: 379 FLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDM 438
L E E + I Y + GY + + + KL F + +
Sbjct: 449 VLSEYEEEE-----RDATGISTLKIKYNNASGYFIEVSKGKLSSVP----SHFIMRRALV 499
Query: 439 DGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAEL 498
+G+ Y T + +EL+ L + KIL++ER + ++ + + ++LL+ + A
Sbjct: 500 NGDR----YTTNRLQELEQQLNESSTKILELERDLFIEVRRSLAQYIEYLLQIADEIANT 555
Query: 499 DCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDG---- 552
D S A A + ++RP + + +I++GRH + E + F+PND+ I +D
Sbjct: 556 DVTASFAQAAISHRWIRPEMDESCMFEIKSGRHPVVENHLPSGEFVPNDSLISSDDDAVP 615
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
++ITGPN +GKS Y++Q ALI L+ GS++PA+ A +G+ D S ++ +
Sbjct: 616 SFDLITGPNMAGKSTYLRQNALIALLAQTGSYIPAEKAHLGIVDRIFCRVGASDNLAKGE 675
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+F++++ + +L AT +SL ++DE G+GT TEDG+ + Y + + K
Sbjct: 676 STFLVEMTETANILHAATKRSLVIMDEVGRGTSTEDGLAIARAVSEYLLDT-IKCKTFFA 734
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + LKF M V + + +VFL ++ G SYG+H A L
Sbjct: 735 THYHEL----SRMEHSNLKFLCMDVSEQQGS------VVFLRKIKEGVTENSYGIHVAAL 784
Query: 725 AGVPAEVIKRAAYVLEAAQN 744
AG+P VI RA +L QN
Sbjct: 785 AGIPKTVIDRAKTILTHIQN 804
>gi|399024625|ref|ZP_10726658.1| DNA mismatch repair protein MutS [Chryseobacterium sp. CF314]
gi|398080075|gb|EJL70903.1| DNA mismatch repair protein MutS [Chryseobacterium sp. CF314]
Length = 861
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 284/576 (49%), Gaps = 61/576 (10%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
+G S+ ++++ TPMG RLLR + P+ ++ + RL+ I F ++ L + + LK
Sbjct: 281 QGKSLLDIIDRTSTPMGGRLLRRRIILPLKSVDEIGRRLSLIDFLNENDNLKYEISQLLK 340
Query: 262 YVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLN--F 319
+ D+ ++ K + + + +S+ ++ +N + + L + +
Sbjct: 341 SISDLDRLMGKLAAEKI--SPKELGYLRQSLINIYKINALLH-----PFADVLAWIEPLY 393
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
D+ E+ C+ L EL + I G +++EG +ELD LR + + F
Sbjct: 394 DL-EELIKCLQNYLNE--ELPVNI---------AKGNVIKEGISEELDRLRGLQSKGRGF 441
Query: 380 LEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMD 439
L+E+ E+ + + I + + GY + + D + L+ ++
Sbjct: 442 LDEMCQREIERTG-----ISSLKIDFNNVFGYFIEVRNTHKDKVPGDWLRKQTLVNAER- 495
Query: 440 GETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELD 499
Y T + +E +N + KI +E + R++ S ++ D + + N A+LD
Sbjct: 496 -------YITEELKEYENQILGAEEKIGVLENELYRNVCSETMVYIDQIQENSNIIAQLD 548
Query: 500 CFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-IN 555
+ L+ +A +Y +P+L +D+Q RH + E + + +IPND +D D + I
Sbjct: 549 VAVGLSELAVSESYTKPVLNDSFSIDLQEARHPIIENALPLGEKYIPNDIFLDKDSQQII 608
Query: 556 IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSF 607
++TGPN +GKS ++Q A++ L+ IGSFVPA A +G+ D + +++A +S+F
Sbjct: 609 MVTGPNMAGKSAILRQTAIVCLLAQIGSFVPAKHAEIGILDKIFTRVGATDNISAGESTF 668
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++++ +L + +SL LLDE G+GT T DG+ + Y K L TH
Sbjct: 669 MVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTQAKTLFATHY 728
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E LNE + ER+K + +S+ + N I+FL +L+PG + S+G+H A LAG+
Sbjct: 729 HE-LNEMTV-NFERIKNFHVSIQENKGN------IIFLRKLIPGGSEHSFGIHVAKLAGM 780
Query: 728 PAEVIKRAAYVLEAAQNNK-------HVERWSHENI 756
PA+V+ RA +L+ + ++ ++R + EN+
Sbjct: 781 PAKVVNRANEILKTLEASRTQSSSSESIKRVTDENM 816
>gi|188590144|ref|YP_001921070.1| DNA mismatch repair protein MutS [Clostridium botulinum E3 str.
Alaska E43]
gi|238689654|sp|B2V1M2.1|MUTS_CLOBA RecName: Full=DNA mismatch repair protein MutS
gi|188500425|gb|ACD53561.1| DNA mismatch repair protein MutS [Clostridium botulinum E3 str.
Alaska E43]
Length = 941
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/583 (28%), Positives = 282/583 (48%), Gaps = 59/583 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + + G S+ +++K T MG R LR W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKTKKG--------SLLWVLDKSATSMGGRTLRKWIDEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ + RL+ + S L LK + DI I+ K ++ + A D + S
Sbjct: 310 VKDEIEKRLSGVEEVFNSIGFNEDLRSALKEIYDIERIVGKISNKNV--NAKDLLSLKSS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + K+ + SE L+ N D EL V +L+ I +
Sbjct: 368 LDKLPCIKKLLKDTSSELLKGYYE--NLD-----------ELIDVRDLLNDSIKEDPGLG 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ + +DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 LKEGNIIKDGYNNLVDELRQSKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYNSIPEGRYIRKQTLANAERFITEELKVME-DKILGS-EEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+I ++ I L K+ ++LD +LALVA +N+Y++P + L+ I +GR
Sbjct: 522 YSIFVEIRDKIEKEISRLKKSARIISDLDGISTLALVALENDYIKPEINTNGLIKITDGR 581
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ D + +ITGPN +GKS Y++QVALI ++ +GSFVPA
Sbjct: 582 HPVVEKVIGKGDFVSNNTALNQTDKELLLITGPNMAGKSTYMRQVALITLMAQMGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS SL LLDE G+GT T
Sbjct: 642 TSANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSNSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y ++ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITKNKNLRCKTLFATHYHELVKLEGILPG---VKNYSVAVKKLKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+VFL ++V G A SYG+ A LAG+P VI RA +LE
Sbjct: 757 ----VVFLRKIVEGGADESYGIEVAKLAGLPENVINRAREILE 795
>gi|363890562|ref|ZP_09317889.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM5]
gi|361964938|gb|EHL17938.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM5]
Length = 851
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 284/586 (48%), Gaps = 72/586 (12%)
Query: 199 RAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHE 258
R +++F ++NK T MG RLL+ + L+P+ D + RLN +S F+ + +
Sbjct: 272 RKNNSYTLFWVLNKANTSMGSRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSH 331
Query: 259 TLKYVKDIPHILKKFNSPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L+ V D+ I S +Y + D KS+ ++ + IF+ G ++S E+L
Sbjct: 332 ILREVYDLERI-----SNRIVYDTVSHRDLLNLKKSLKAVNEIKNIFK-GENDSRFEEL- 384
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
++++ K L E I I + KE +++ + ++L R + E
Sbjct: 385 ---YEVLSKNDLMPIINLI---ERSIEEIGEDFKKEH----IIKSSYDEKLAHYRDLLEN 434
Query: 376 LPEFL--EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEF 433
L E E + +L I Y GY + I T LQ F
Sbjct: 435 TSNILIKMERDEREKTGIKNLK-------ISYNKVFGYYIEI--------TKAALQNF-- 477
Query: 434 AFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL-------DMERAITRDLVSHICLFSD 486
+M + +R R ++N L I ++L +E + +++ + F
Sbjct: 478 ---NMPSDYERRQTLVSSERFINNNLKKIEEEMLTARQGESQLESVLYKEVKEELKNFIP 534
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPN 544
+++ +++D + +LA A +N+Y++P+++ + + I+NGRH + E + + ++PN
Sbjct: 535 KIMQVAEMISQIDVYTALAKTAIENDYVKPMISTDGNIVIKNGRHPVIEKLLPNEDYVPN 594
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKH----- 599
DT + +IITGPN +GKS Y++QVA+I+ ++HIGS+VPA A + + DS +
Sbjct: 595 DTDL-TKSETHIITGPNMAGKSTYMRQVAIIMLMAHIGSYVPASFAQIPIIDSIYTRIGA 653
Query: 600 ---MTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
++ QS+FM+++ +V +L+ AT SL +LDE G+GT T DG+ L + Y C+
Sbjct: 654 SDDLSMGQSTFMVEMTEVSNILKNATQNSLIILDEIGRGTSTYDGMSLAFSIVEYI--CE 711
Query: 657 -VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALL 715
+ K LV TH EL K + +K Y M V D ++I FL ++V G A
Sbjct: 712 HIKAKTLVSTHYHELT--ALESKYKNIKNYCMLV-------DDSKEIKFLRKIVLGKADK 762
Query: 716 SYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
SYG+H A LA +P EV++RA +L + ++ + S QDQ
Sbjct: 763 SYGIHVAQLADLPYEVLERANIILSKLETSEKKSSKKYNQKSEQDQ 808
>gi|317153256|ref|YP_004121304.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
gi|316943507|gb|ADU62558.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
Length = 888
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 195/672 (29%), Positives = 306/672 (45%), Gaps = 99/672 (14%)
Query: 122 MDMGSEVQ-VRASGGLLAVLENERIVDTLEQKESGNASIT-IDSVIEVSLNKFLKLDATA 179
+D+G + + VRA G LL LE+ + +T + ++L K L LD
Sbjct: 225 LDLGDKPELVRACGALLTYLEH-----------TQKCPLTHLGEFRPLNLGKHLLLDEVT 273
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
L+IF+ GR +G +++ ++++ +TPMG RLL +P D+ +
Sbjct: 274 ERNLEIFRRLD-------GRPGKG-TLWRVLDRTMTPMGGRLLEARLRQPWRDIVPIEKT 325
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFI--YTASDWTAFLKSICSLLH 297
+ + F ++L A L + L V H L++ ++ + T D+ A +S+ L
Sbjct: 326 QDCVVFLHDRDQLRADLRQALDGV----HDLERLSTRVVLGRATPRDFVALRQSLPMLPK 381
Query: 298 VNKIFEVGISESLREQLR--LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
V + G+ ++ LL +D +E A + E ++V I D G
Sbjct: 382 VRALL-AGLDLDTAPDVKRLLLKWDDMEDLAGLL--ESSFVDSPPPLITD---------G 429
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHLCKEMFVPCIVYIHQIGYLM 413
L R+GF LDEL ++ E + L + EL +P L + Y GY
Sbjct: 430 GLFRKGFDPRLDELIELNEHGEDKLRTLHQQELDASSIPKLK-------LGYNKVFGYYF 482
Query: 414 CI---FEEKLDDTTLEQ--LQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
+ ++ ++ D + + L G E Y TP +E++ + +
Sbjct: 483 EVSKAYKGQVPDHFIRRQTLVGSER-------------YITPALKEMEERIISASDERKA 529
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E ++ L + L + A LD + LA A N + RP L +DI+
Sbjct: 530 LEHSLFLTLREQVASARSRFLFMADAVAALDYWQGLAEAARINEWHRPELHDGLDIDIEA 589
Query: 529 GRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH + E M T+IPND R+D D RI +ITGPN +GKS ++QVA+ V ++ IGSFVP
Sbjct: 590 GRHPVVEDAMGRATYIPNDLRMDRDKRILLITGPNMAGKSTVLRQVAIFVIMAQIGSFVP 649
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A A +GL D S ++ S+FM+++ + +LRQAT +SL +LDE G+GT T
Sbjct: 650 ARRARLGLADRVFSRVGASDNLAQGHSTFMVEMTETARILRQATQRSLVILDEIGRGTST 709
Query: 639 EDGIGLLGGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNST 697
DG+ L + T + L TH EL G K E L+ ++V +
Sbjct: 710 YDGLSLAWAVVEELATRARGGIRTLFATHYHELT--GLEGKIEGLRNLNIAVKEWKG--- 764
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENIS 757
DIVFL RLVPG A SYG+ A LAGVP V+ RA +L +
Sbjct: 765 ---DIVFLRRLVPGPADRSYGIEVAKLAGVPKPVVDRAREILANLEEK------------ 809
Query: 758 AQDQQYKNAVEK 769
+QD + + AVE+
Sbjct: 810 SQDTRSRGAVER 821
>gi|429192989|ref|YP_007178667.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
gi|429137207|gb|AFZ74218.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
Length = 896
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 171/634 (26%), Positives = 303/634 (47%), Gaps = 74/634 (11%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL---NKFLKLDATAH 180
+ ++ ++RA G LL E R ++ + E+ + S ++ + ++ ++L LDA A
Sbjct: 230 LATDAEIRACGALLEYAEYARGSESEAELEADDESARLEYITHLTRYDPREYLLLDAVAL 289
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
+L++F+ P + ++ ++ G++++ + +G R LR+W RP+L+ + +RL
Sbjct: 290 RSLELFE----PRAV---HGRDEATLVGVLDETSSALGGRKLRDWIRRPLLEPARIEARL 342
Query: 241 NAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL---LH 297
+A+ S L + L V D+ ++ + S A + +CSL L
Sbjct: 343 DAVEELQRSVRAREKLQDLLWDVYDLERLIGRI---------SRERANARDLCSLRATLA 393
Query: 298 VNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
V ++ S ++L+ L+ D+ LA + EL+ I + E G +
Sbjct: 394 VVPDVRAHLAGSECDRLQQLHADL---------DPLADIRELIEDSIVEDPPIEITEGGI 444
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE 417
V EG+ + LD LRQ + +++++ LE + + +H GY + +
Sbjct: 445 VAEGYDENLDALRQTARDGKQWIDD---LEERERERTGIDSLKVGYNSVH--GYYIEVTN 499
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
LD + + S+ + TP +E ++ + + ++E + R++
Sbjct: 500 PNLDSVPDDYQRRQTLKNSER--------FATPALKEREDEIVGAEERADELEYELFREV 551
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-----TLEPLLDIQNGRHV 532
+ + + + A +D +SLA VA Q +Y RP L LE ++I+ GRH
Sbjct: 552 RKTVANEVERVQALADALATVDALVSLATVAAQYDYCRPELLERGDDLE--VEIEGGRHP 609
Query: 533 LQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ E T ++F+PND R D R+ +ITGPN SGKS Y++QVA IV L+ +GSFVPA +A +
Sbjct: 610 VVERTQESFVPNDARFAGDRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPARSARL 669
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
D S + +S+FM+++ ++ +LR+A +SL LLDE G+GT T DG+ +
Sbjct: 670 TPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREADDRSLVLLDEVGRGTSTADGLAI 729
Query: 645 LGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ +V L TH LTE+ + L + L F E + D E
Sbjct: 730 AQAMTEHLHD-EVGATTLFATHHHPLTEVAED--LEDAFTLHF--------EVDQEDGE- 777
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+VF + + PG A SYG+ A AGVP V+ R+
Sbjct: 778 VVFHHEVAPGAATGSYGVEVATAAGVPEPVVARS 811
>gi|256420944|ref|YP_003121597.1| DNA mismatch repair protein MutS [Chitinophaga pinensis DSM 2588]
gi|256035852|gb|ACU59396.1| DNA mismatch repair protein MutS [Chitinophaga pinensis DSM 2588]
Length = 868
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 266/562 (47%), Gaps = 54/562 (9%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G ++ ++ VTPMG RLL+ W + P+ D++ +N RL+ F+ +L + + LK
Sbjct: 286 GHTLLKTLDTTVTPMGARLLKRWMVLPLRDIKQINERLDVTEHFIKETDLSRDVLQHLKQ 345
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
D+ ++ K P + K++ + GI + L + I
Sbjct: 346 TGDLERLVSKI--PLRKINPREVMMLAKALQQV--------EGIKQLLAKTGHPYLTAIG 395
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
EK C L + E ++ + SK G +++ G ELD LR I E+L
Sbjct: 396 EKLNPCPGI-LCRILEQIVETPPILVSK----GGVIQNGIHTELDNLRTIAHSGKEYLLR 450
Query: 383 VASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+ E +P L + + + GY + + ++ A ++
Sbjct: 451 IQQTESDATGIPSLK-------VAFNNVFGYYLEVTNAHKSKVPENWIRKQTLANAER-- 501
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDC 500
Y TP+ +E + + KIL +E + +L+ + + + A LDC
Sbjct: 502 ------YITPELKEYEEKIVGAEEKILALEIQLFDELLLALQPHIQAIQQNAQLMARLDC 555
Query: 501 FLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINI 556
LS A A Q Y RP +T LDI+ GRH + E + ++++ ND +D + +I I
Sbjct: 556 LLSFANNAIQYKYRRPNVTEGYHLDIREGRHPVIERGLPPGESYVANDIVLDKEEQQIII 615
Query: 557 ITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFM 608
+TGPN SGKS ++Q ALI ++H+GSFVPA AA +GLTD S +++ +S+FM
Sbjct: 616 LTGPNMSGKSALLRQTALITLMAHMGSFVPASAAEIGLTDKIFTRVGASDNLSGGESTFM 675
Query: 609 IDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDV-PPKVLVCTHL 667
+++++ ++ T +SL +LDE G+GT T DGI + + Y PK L TH
Sbjct: 676 VEMNETASIINNITPRSLVILDEIGRGTSTYDGISIAWSIVEYLHDMTPHKPKTLFATHY 735
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
E LNE K R+K Y ++ N ++FL +L PG + S+G+H A +AG+
Sbjct: 736 HE-LNE-LENKHGRIKNYHIT------NKESGNKVIFLRKLAPGGSRHSFGIHVARMAGM 787
Query: 728 PAEVIKRAAYVLEAAQNNKHVE 749
P ++++RA VL + KH++
Sbjct: 788 PPQLLQRANEVLSHLE-QKHID 808
>gi|340618416|ref|YP_004736869.1| DNA mismatch repair protein MutS [Zobellia galactanivorans]
gi|339733213|emb|CAZ96588.1| DNA mismatch repair protein MutS [Zobellia galactanivorans]
Length = 873
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/578 (25%), Positives = 284/578 (49%), Gaps = 58/578 (10%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
+ ++ +++K ++PMG R+L+ W P+ + E +N R +S+ ++ + + + +
Sbjct: 285 QNAVTLLSIIDKTLSPMGGRMLKRWLALPLKNTEKINRRHQVVSYLHDHDDTLLKIQQRI 344
Query: 261 KYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
K + D+ ++ K + + S+ +++ + ++ ++S E L+L
Sbjct: 345 KQMGDLERLISKVATGKV--NPKEIVQLKNSLEAIIPIKQL----TAQSNDEALQL---- 394
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
I ++ +C + E++ V+ K G + +G+ DELDELR + ++L
Sbjct: 395 ISDQLHACDMLR-NKIKEMINEEAPVHIPK----GKTIADGYSDELDELRGLAFSGKDYL 449
Query: 381 EEVASLE-----LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
+++ + E + L +F GY + + D E ++
Sbjct: 450 DKMLARESERTGITSLKIASNNVF----------GYYIEVRNTHKDKVPEEWIRKQTLVN 499
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ Y T + +E ++ + +IL +E+ + LV + +
Sbjct: 500 AER--------YITEELKEYESKILGAEERILSLEQQLFSQLVVWAQEYIAPVQNNAQQI 551
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND- 551
A+LDC A +A +NNY +P++ ++I+NGRH + E + + +I ND ++ D
Sbjct: 552 AQLDCLCGFAQLAKENNYAKPVINDTTEINIKNGRHPVIEKQLPLGEAYIANDVTLNRDE 611
Query: 552 GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAE 603
+I +ITGPN SGKS ++Q ALIV L+ +GSFVPA+AA +G D S +++
Sbjct: 612 QQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAAEIGYVDKIFTRVGASDNISMG 671
Query: 604 QSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLV 663
+S+FM+++++ +L + +SL LLDE G+GT T DGI + Y K L
Sbjct: 672 ESTFMVEMNETASILNNLSERSLVLLDEIGRGTSTYDGISIAWAISEYLHEHPARAKTLF 731
Query: 664 CTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCAL 723
TH E LNE ER+K Y +SV ++N ++FL +L G + S+G+H A
Sbjct: 732 ATHYHE-LNE-MATTFERIKNYNVSVKELKDN------VLFLRKLTEGGSEHSFGIHVAK 783
Query: 724 LAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQ 761
+AG+P++VI++A +L+ + + E + + SAQD+
Sbjct: 784 MAGMPSQVIRKANKILKKLEKSHSSEELTDKLQSAQDE 821
>gi|297588419|ref|ZP_06947062.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
gi|297573792|gb|EFH92513.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
Length = 859
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 289/598 (48%), Gaps = 71/598 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+S + +N+F+++D+ + L+I + S G S+FG++N T MG R
Sbjct: 245 INSSSKYYINEFMEIDSNSVINLEIQKNLYTNSKNG--------SLFGVLNHTKTSMGSR 296
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL ++ RP++D E + +R + + EL+ +L ++L + D+ ++ K + S
Sbjct: 297 LLHSYLERPLMDKEEILTRQSRVEEIFEDYELLVNLEDSLDGIYDLDRLIAKLSYKS--A 354
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D A SI + ++ + ++ ++L I EK +L +Y+L+
Sbjct: 355 NAKDLIALKVSIEKIPYLKTLLNCN-----KKNIQL----IGEKL-----DDLGDIYDLI 400
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELR----QIYEELPEFLEEVASLELVQLPHLCK 396
I + G L++ F +ELD+LR EL E+ E++ + + + +L
Sbjct: 401 DKSIVDDPPVTLTEGNLIKSNFSNELDQLRYNRVNGKNELVEY--EMSEKDRLGIKNLK- 457
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
IV+ ++GY + D T L + T + T + ++
Sbjct: 458 ------IVFNKKLGYFI--------DVTKSNLNKVGDDYEKRQTLTNSSRFKTKQLEAIE 503
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
+ + D +I ++E I D+ I + K+ + A +D SLA A+ NNY++P
Sbjct: 504 SKILDSEDEIFELEYKIFEDIRKIILKNLSRIKKSADLIAIIDVSNSLAKCAYLNNYIKP 563
Query: 517 ILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVA 573
+ L+D+ RH + E++V FI ND I I +ITGPN SGKS Y++QVA
Sbjct: 564 DINTYGLIDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVA 623
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
LI L+ IGSFVPA A + + D S ++ +S+FM+++ ++ +++ ATS S
Sbjct: 624 LICILNQIGSFVPATKANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNS 683
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERL 682
L +LDE G+GT T DG+ L + Y ++ ++ K L TH LTEL + +
Sbjct: 684 LLVLDEIGRGTSTFDGLSLAWAIVEY-ISKNIKAKTLFATHYHELTEL-------EKKLD 735
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
M V E N + I+FL ++ G SYG+ A LAG+P +IKRA +L+
Sbjct: 736 NLINMKVDIKETNDS----IIFLRKITRGSTDKSYGIEVAELAGMPKSLIKRAKSILK 789
>gi|448440866|ref|ZP_21588864.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
gi|445689774|gb|ELZ42000.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
Length = 965
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 173/652 (26%), Positives = 295/652 (45%), Gaps = 74/652 (11%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
+ ++RA+G +LA E Q + G S + + L+LDA A +L++
Sbjct: 255 GDAELRAAGAVLAYAE-------YTQGDDGPLSY-VTRLRRYDPRDRLRLDAAAQRSLEL 306
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
F+ + G+G + ++F +++ +GRR L W RP++D + + SR +A+
Sbjct: 307 FE------NRGLGASD---TLFDALDETSCALGRRCLERWLRRPLVDADAIRSRHDAVGE 357
Query: 246 FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSIC-------SLLHV 298
+ + + L D+ ++ + + A D + ++ +L
Sbjct: 358 LADRTLVREGVADALGTAYDLERLVGRISRGR--ADARDLRSLHATLAVVPELKATLAGT 415
Query: 299 NKIFEV---GISESLREQLRLLNFDIVE--KAASCITTELAYVYELVIGIIDVNRSKEKG 353
N E G +++ + NF + + EL V EL+ I N E
Sbjct: 416 NGAGEPESGGDADADADADADANFPRTDHLRDLRDRLDELTEVRELIDDAIAANPPPEIT 475
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
G ++REGF +LD+LR E E+ VA LE + + +H GY +
Sbjct: 476 EGGVIREGFDGDLDDLRATEREGREW---VAELEASERERTGIDSLSVGHNQVH--GYYI 530
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ + LD + + S+ Y+TP+ +E + + + +E +
Sbjct: 531 EVTDANLDRVPDDYRRRQTLKNSER--------YYTPELKEREEEIVGAAERADALEYEL 582
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL------LDIQ 527
D+ + ++ + + AELD SLA VA + +Y+RP + +P ++I+
Sbjct: 583 FVDVRDRVASETERIQGLADALAELDALRSLATVAVEGDYVRPEIVADPAAAPEAGVEIE 642
Query: 528 NGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
GRH + E ++F+PND + G I +ITGPN SGKS Y++ VAL V L+ GSFVPA
Sbjct: 643 GGRHPVVERAEESFVPNDADLPR-GSIAVITGPNMSGKSTYMRSVALAVVLAQTGSFVPA 701
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
AA++ + D S + QS+FM ++ ++ +L A SL LLDE G+GT T
Sbjct: 702 QAASLPVFDRLFTRVGASDDIAGGQSTFMREMSELTEILHDAGPDSLVLLDEVGRGTATT 761
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNS 696
DG + F+ ++ L TH LT+L E ER + R +
Sbjct: 762 DGRAIARAAAE-FIHDELGATALFATHYHDLTDLAEE-----RERAFNLHFTATREDG-- 813
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
D+ FL+R+VPG + SYG+ A LAGVPA V++R+ ++ A ++
Sbjct: 814 ----DVTFLHRVVPGASSSSYGVEVAELAGVPAPVVERSRDLVAAETDDAEA 861
>gi|404482176|ref|ZP_11017403.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
gi|404344337|gb|EJZ70694.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
Length = 882
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 277/589 (47%), Gaps = 72/589 (12%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D ++ L++ +T + G S+ G+++K T MG R+LR + +P++
Sbjct: 265 YMIVDTSSRRNLELVETMREKKKNG--------SLLGVLDKTNTAMGARMLRGFLEQPLV 316
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHIL-----KKFNSPSFIYTASDWT 286
+ E + +R A++ L E L + D+ ++ K N+ + +
Sbjct: 317 NKERIINRQEAVAELFDRYIDREELREYLNPIYDLERLMSRVVTKNANTRDLL----SLS 372
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDV 346
A +K I + V K FE G + L L+ I + I+
Sbjct: 373 ASMKMISPIKDVLKTFESGEIKKTNNNLDRLHDIIDIIDRA----------------INE 416
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS--LELVQLPHLCKEMFVPCIV 404
+ G ++ G+ E+D+LRQ E +L + S E + +L K F
Sbjct: 417 DSPLSLKEGNIINTGYNSEIDKLRQAKTEGKNWLASLESEEKEKTGIKNL-KVKFNKVFG 475
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
Y ++ F++ + D F T Y T K ++L+N++
Sbjct: 476 YYFEV---TNSFKDMVPDY-----------FIRKQTLTNAERYTTDKLKDLENIILGAED 521
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
K+ +E + ++ I + + + A +D SLA VA+ NNY++P + ++
Sbjct: 522 KLNSLEYEVFVEIRDEIAKNVNRIQSSAKAVAYIDALCSLATVAYNNNYVKPEINTTGVI 581
Query: 525 DIQNGRHVLQEMTV--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
DI++GRH + E + D+FI NDT +D N R++IITGPN +GKS Y++Q ALI ++ I
Sbjct: 582 DIRDGRHPVVETMLNDDSFIANDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICMMAQI 641
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA A + + D S + + QS+FM+++ +V +LR AT SL +LDE G
Sbjct: 642 GSFVPAKQANLCVCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVILDEIG 701
Query: 634 KGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
+GT T DG+ + + + + K L TH EL EG LP + Y +SV
Sbjct: 702 RGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSELEGTLPG---VNNYCISV-- 756
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
EN ++IVFL +++ G A SYG+ A LAGVP V RA ++E
Sbjct: 757 KENG----DNIVFLRKIITGGADKSYGIQVAKLAGVPDSVTNRAKELIE 801
>gi|417940025|ref|ZP_12583313.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
gi|343388906|gb|EGV01491.1| DNA mismatch repair protein MutS [Streptococcus oralis SK313]
Length = 844
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/596 (27%), Positives = 269/596 (45%), Gaps = 63/596 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALGYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQTLAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAITAV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++ + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESTHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ L I Y + + K L TH EL + G E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLGS--SLEHLVNVHVAT 737
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
L E + FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 738 LEQEGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQ 787
>gi|342213683|ref|ZP_08706405.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 780
str. F0422]
gi|341597708|gb|EGS40250.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 780
str. F0422]
Length = 836
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 169/605 (27%), Positives = 287/605 (47%), Gaps = 69/605 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ V ++S+ + LD + L+I + + S G ++ +++K +TPMG R
Sbjct: 252 INYVHQLSVGDRMILDTSCLRHLEITRNVRDGSKKG--------TLLDVLDKTLTPMGAR 303
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+L+ W P++D+ + R I + + + + L L V D IL + + S
Sbjct: 304 MLKQWIEHPLMDIHRIVRRQMGIGESIDNPTMRSQLRSLLTSVYDFERILSRVETGSV-- 361
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ D+T+ +S+ L + ++ + S +I++ S I T L
Sbjct: 362 SPRDFTSLRESLRVLPMIQEVIQHCTS------------NILQDCHSMIHTHNDLCDLLT 409
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL----EEVASLELVQLPHLCK 396
I+D K G ++R+G+ ELDELR + E+L EE ++L
Sbjct: 410 RAIVDQPSLALKD-GHVIRDGYSAELDELRSLATNSQEWLHRLEEEAKQATGIRLKTGYN 468
Query: 397 EMFVPCI-VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
++F V Q+G + F K T E+ Y TP+ +E
Sbjct: 469 KVFGYYFEVSQGQVGLVPDYFIRKQTLTNAER-------------------YITPELKEF 509
Query: 456 DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
+ + + +I +E ++ +DL + + A+LD LSL VA N Y+
Sbjct: 510 EIKMLNAKEQIQKLEYSLYQDLRLIAKAHIKEIQETARGIAQLDVILSLGEVAFTNKYVC 569
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQV 572
P + + I++GRH + E + + FIPND ++ ++ +ITGPN +GKS Y++QV
Sbjct: 570 PTIVTNGAISIKDGRHPVIETLLKQELFIPNDVVLNHSEEEFILITGPNMAGKSTYMRQV 629
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
AL++ ++ IGSF+PA AT+ D S ++ QS+FM+++ +V +L AT
Sbjct: 630 ALLMIMAQIGSFIPAREATIAPVDRIFTRVGASDDISTGQSTFMVEMKEVSYILEHATCN 689
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLNEGCLPKSERLK 683
SL +LDE G+GT T DG+ + + + C+ + K L TH EL+ + +LK
Sbjct: 690 SLVILDEIGRGTSTFDGLSIARAVVEHI--CETIHCKSLFATHYHELIE--LEDQYSKLK 745
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQ 743
YT++V N D++FL R+V G A SYG+H A LAG+P V+ RA +L +
Sbjct: 746 NYTVAVKDKGN------DVLFLRRIVKGGADRSYGIHVAKLAGLPKAVLDRANAILSHLE 799
Query: 744 NNKHV 748
+ K V
Sbjct: 800 DGKVV 804
>gi|425467331|ref|ZP_18846614.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9809]
gi|389829907|emb|CCI28397.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9809]
Length = 882
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 201/774 (25%), Positives = 337/774 (43%), Gaps = 117/774 (15%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELSRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----YHTPKTRELDNLLGDIYHKILD 468
+ K D F+ D K+ Y T + +E +N++ ++
Sbjct: 518 SLPRSKAD-------------FAPKDYVRKQTLVNEERYITTELKEKENIILTAVDELNK 564
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I DL + FS + + A LD +LA +A Y RP + L+DI++
Sbjct: 565 LEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKD 624
Query: 529 GRH--VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHI 581
GRH V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+
Sbjct: 625 GRHPVVEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQT 684
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA +A + + D + QS+FM+++++ +L AT +SL LLDE G
Sbjct: 685 GSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIG 744
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + Y T + + + TH EL + E + Y ++V
Sbjct: 745 RGTATFDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELP 801
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ +IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 802 H------EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|227903306|ref|ZP_04021111.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
gi|227868935|gb|EEJ76356.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796]
Length = 851
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 277/586 (47%), Gaps = 61/586 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++K T MG RLL+ W R
Sbjct: 237 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDKTHTAMGGRLLKQWLAR 288
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + + + LK V D+ + + AF
Sbjct: 289 PLLNVDEINHREEMVQALFDGYFTRENAIDALKGVYDLERLTGRI-------------AF 335
Query: 289 LK-SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
+ LL +++ E ++ + L + D++++ A I L V EL+ I +
Sbjct: 336 GNVNARELLQLSRSLEA--VPTILDALDQSDSDVLKEFAQKIDP-LKGVAELITTTIVKD 392
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIH 407
G L+REG +LD R ++L A +E + E + Y
Sbjct: 393 PPLLTTEGGLIREGVDKQLDRYRDAMNNGKKWL---AQMEADERQKTGIENL--KVGYNK 447
Query: 408 QIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKIL 467
GY + + + L++ ++ T Y TP+ +E +NL+ + +
Sbjct: 448 VFGYYIQVSNGNKNKVPLDR-------YTRKQTLTNAERYITPELKEHENLILEAQTRST 500
Query: 468 DMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-TLEPLLDI 526
D+E + L + + L K + A LD F A VA QNNY RP T +D+
Sbjct: 501 DLEYDLFVRLREEVKKYIPALQKLGSQLAALDVFCGFASVAEQNNYCRPSFHTDNQDIDV 560
Query: 527 QNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
NGRH + E MT ++IPN +D+ I +ITGPN SGKS Y++Q+ALI ++ +GSF
Sbjct: 561 VNGRHPVVEKVMTAGSYIPNSVEMDSSTNIYLITGPNMSGKSTYMRQMALIAIMAQVGSF 620
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPAD+A + + D + + + QS+FM+++ + L+ AT +SL L DE G+GT
Sbjct: 621 VPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGT 680
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPEN 694
T D + L G + Y + V K TH EL L+E + LK + V E
Sbjct: 681 ATYDCMALAGAIVKY-LHDKVGAKAFFATHYHELTDLDETL----DHLK--NIHVGATEE 733
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 734 NGK----LIFLHKILPGPADQSYGIHVAQLAGLPKSVLREATKLLK 775
>gi|419780651|ref|ZP_14306494.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
gi|383185027|gb|EIC77530.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
Length = 844
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/601 (27%), Positives = 272/601 (45%), Gaps = 73/601 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + S I+ +A
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GVEQPALAYLIEQL-----DAIPELESLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 404 HVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 STLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
GD+ K ++E I + + + L A +D SLA+VA + +R
Sbjct: 497 EGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P + +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGDDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 MTAIMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSLKNLVNVHV 735
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
T+ E + + FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 736 ATL-----EQDG----QVTFLHKIEPGPADKSYGIHVAKIAGLPAELLSRADKILTQLEN 786
Query: 745 N 745
Sbjct: 787 Q 787
>gi|118579497|ref|YP_900747.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
gi|189083167|sp|A1AMW9.1|MUTS_PELPD RecName: Full=DNA mismatch repair protein MutS
gi|118502207|gb|ABK98689.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
Length = 870
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 284/599 (47%), Gaps = 70/599 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++ L LD L+I + + K+ S+ G +++ VT MG R L+ W P
Sbjct: 265 SEHLALDPATRRNLEITAS--------MAEGKKSGSLLGCLDRTVTAMGARRLKQWLGYP 316
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTA 287
++ LE + SRL+A+ L L +K + D L++ N + +AS D A
Sbjct: 317 LVGLEPIRSRLDAVEELLEGATTRDELAAQMKGIAD----LERLNGRIGMASASGRDLRA 372
Query: 288 F---LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGII 344
L+ I L + + + L +++ L DI++ I +
Sbjct: 373 LHDSLQRIPPLRELMATMQTALLCQLTKEIDPLE-DILDLVGRGIVENPPFSLR------ 425
Query: 345 DVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIV 404
G ++ G+ ELDELR I E F+ + + E + + I
Sbjct: 426 ---------EGGIIAPGYNPELDELRSISHEGKGFIARLEAQERAR-----TGISSLKIR 471
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
+ GY + I + L + ++ A ++ Y T + + + +
Sbjct: 472 FNKVFGYSIEITKSNLASVPADYIRRQTLANAER--------YITEELKNYEEKVLGAED 523
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
+I ++E ++ +++ + + + + A LD +SLA VA + Y +P++ ++
Sbjct: 524 RIHELEYSLFQEIRERVAGEGSRIACSASGLATLDVLISLAGVADERGYCKPLVDDSQVI 583
Query: 525 DIQNGRH-VLQEMTV-DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
DI +GRH V++ M + + F+PNDT +D + +I +ITGPN +GKS Y++QVALI ++
Sbjct: 584 DIHDGRHPVIEAMKLGERFVPNDTLLDGGESQILMITGPNMAGKSTYMRQVALITLMAQA 643
Query: 582 GSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA +A +G+ D +++ QS+FM+++ + +LR AT +SL ++DE G
Sbjct: 644 GSFVPAASARIGIADRIFTRVGAGDNLSRGQSTFMLEMMEAAGILRNATPKSLIVMDEIG 703
Query: 634 KGTLTEDGIGLLGGTINYF---VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
+GT T DG+ + Y TC + L TH EL ER++ +T++V
Sbjct: 704 RGTSTFDGVSIAWAVAEYIHDTPTCRS--RTLFATHYHELTELAA--TRERIRNFTVAV- 758
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
R N+ ++FL +VPG A SYG+ A LAG+PA+VI+RA +L +N + E
Sbjct: 759 REWNDQ-----VIFLRTIVPGGASHSYGIQVARLAGMPADVIERAKEILRNLENGEFEE 812
>gi|448326836|ref|ZP_21516180.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
gi|445609887|gb|ELY63673.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
Length = 913
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 171/634 (26%), Positives = 303/634 (47%), Gaps = 74/634 (11%)
Query: 124 MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSL---NKFLKLDATAH 180
+ ++ ++RA G LL E R ++ + E+ + S ++ + ++ ++L LDA A
Sbjct: 247 LATDAEIRACGALLEYAEYARGSESEAELEADDESARLEYITHLTRYDPREYLLLDAVAL 306
Query: 181 EALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRL 240
+L++F+ P + ++ ++ G++++ + +G R LR+W RP+L+ + +RL
Sbjct: 307 RSLELFE----PRAV---HGRDEATLVGVLDETSSALGGRKLRDWIRRPLLEPARIEARL 359
Query: 241 NAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL---LH 297
+A+ S L + L V D+ ++ + S A + +CSL L
Sbjct: 360 DAVEELQRSVRAREKLQDLLWDVYDLERLIGRI---------SRERANARDLCSLRATLA 410
Query: 298 VNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTL 357
V ++ S ++L+ L+ D+ LA + EL+ I + E G +
Sbjct: 411 VVPDVRAHLAGSECDRLQQLHADL---------DPLADIRELIEDSIVEDPPIEITEGGI 461
Query: 358 VREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFE 417
V EG+ + LD LRQ + +++++ LE + + +H GY + +
Sbjct: 462 VAEGYDENLDALRQTARDGKQWIDD---LEERERERTGIDSLKVGYNSVH--GYYIEVTN 516
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
LD + + S+ + TP +E ++ + + ++E + R++
Sbjct: 517 PNLDSVPDDYQRRQTLKNSER--------FATPALKEREDEIVGAEERADELEYELFREV 568
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL-----TLEPLLDIQNGRHV 532
+ + + + A +D +SLA VA Q +Y RP L LE ++I+ GRH
Sbjct: 569 RKTVANEVERVQALADALATVDALVSLATVAAQYDYCRPELLERGDDLE--VEIEGGRHP 626
Query: 533 LQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ E T ++F+PND R D R+ +ITGPN SGKS Y++QVA IV L+ +GSFVPA +A +
Sbjct: 627 VVERTQESFVPNDARFAGDRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPARSARL 686
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
D S + +S+FM+++ ++ +LR+A +SL LLDE G+GT T DG+ +
Sbjct: 687 TPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREADDRSLVLLDEVGRGTSTADGLAI 746
Query: 645 LGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ +V L TH LTE+ + L + L F E + D E
Sbjct: 747 AQAMTEHLHD-EVGATTLFATHHHPLTEVAED--LEDAFTLHF--------EVDQEDGE- 794
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+VF + + PG A SYG+ A AGVP V+ R+
Sbjct: 795 VVFHHEVAPGAATGSYGVEVATAAGVPEPVVARS 828
>gi|423318198|ref|ZP_17296095.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB049-03]
gi|423320486|ref|ZP_17298358.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB077-07]
gi|405596687|gb|EKB70020.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB049-03]
gi|405605090|gb|EKB78157.1| DNA mismatch repair protein mutS [Lactobacillus crispatus FB077-07]
Length = 865
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 278/594 (46%), Gaps = 77/594 (12%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+N++L++ T L++ + K MG S+F +++ T MG RLL+ W R
Sbjct: 249 VNQYLQMSHTVQNNLELVASAKTGKKMG--------SLFWVLDNTHTAMGGRLLKQWLAR 300
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L+++ +N R + L + + LK V D+ + +
Sbjct: 301 PLLNMDEINHREEMVQALLDGYFTRENAVDALKGVYDLERLTGRI--------------- 345
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAY-------VYELVI 341
+ +VN + +S SL+ +L D +E++ S I + A V E++
Sbjct: 346 -----AFGNVNARELLQLSRSLQAVPVIL--DALEQSDSDILVDFAKKIDPLKGVAEMIT 398
Query: 342 GIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMF 399
I + G L++ G +LD R ++L E+ + E + + +L
Sbjct: 399 STIVKDPPVLTTEGGLIQGGVDPQLDRYRDAMNNGKKWLAEMEADERQKTGIDNLK---- 454
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
+ Y GY + + L++ ++ T Y TP+ +E +NL+
Sbjct: 455 ---VGYNKVFGYYIQVSNGNKSKVPLDR-------YTRKQTLTNAERYITPELKEHENLI 504
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
+ + D+E + L + + L K A LD + A VA QNNY RP
Sbjct: 505 LEAQTRSTDLEYDLFVKLREDVKKYIPALQKLGGQLAALDVYCGFATVAEQNNYCRPTFH 564
Query: 520 LEPL-LDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++ NGRH + E MT ++IPND ++D I +ITGPN SGKS Y++Q+ALI
Sbjct: 565 ADNQDINVTNGRHPVVEKVMTAGSYIPNDVKMDEGTNIYLITGPNMSGKSTYMRQMALIA 624
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ +GSFVPAD+A + + D + + + QS+FM+++ + L+ AT +SL L
Sbjct: 625 IMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQYATKRSLVL 684
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYT 686
DE G+GT T DG+ L G + Y V K L TH EL ++E + LK
Sbjct: 685 FDEIGRGTATYDGMALAGAIVKYL-HDKVGAKALFATHYHELTVMDETL----DHLK--N 737
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+ V E N ++FL++++PG A SYG+H A LAG+P V++ A +L+
Sbjct: 738 IHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPRNVLREATKLLK 787
>gi|417794024|ref|ZP_12441287.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
gi|334271134|gb|EGL89528.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
Length = 844
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/597 (27%), Positives = 271/597 (45%), Gaps = 65/597 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPHVI- 406
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 407 ----------TEGGIIRTGFDETLDKYRRVLREGTSWIVEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 Y---HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQTLAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMSEDTSIQLITGPNMSGKSTYMRQLAMTAV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y + + K L TH EL + E L E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVNVHVA 736
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
L + + FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 737 TLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQ 787
>gi|150020893|ref|YP_001306247.1| DNA mismatch repair protein MutS [Thermosipho melanesiensis BI429]
gi|189083203|sp|A6LLR1.1|MUTS_THEM4 RecName: Full=DNA mismatch repair protein MutS
gi|149793414|gb|ABR30862.1| DNA mismatch repair protein MutS [Thermosipho melanesiensis BI429]
Length = 819
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 166/598 (27%), Positives = 283/598 (47%), Gaps = 78/598 (13%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+K++ LD+ E L + +K G ++F ++NK T MG RLL+ W L+P
Sbjct: 250 SKYMILDSKTVENLSLIPGEK------------GKNLFDILNKTKTSMGARLLKKWILQP 297
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDW 285
+ + + + R + F L+ + E L V D+ IL + SP + +
Sbjct: 298 LKEKKEILERQKLVEAFYNDHLLLNEVREYLSGVYDLERILTRLGYGKVSPKDLVSLKRS 357
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIID 345
+ SI L N+ V ++SL E ++ I+EKA +Y+
Sbjct: 358 LYLVPSIKDALRTNENL-VSFAQSLNEFNEVVG--ILEKA----------LYD------- 397
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIY----EELPEFLEEVASLELVQLPHLCKEMFVP 401
S G G +++ G+ ELD+ R + E+L EF E +Q
Sbjct: 398 -EPSNAPGDGNVIKGGYSVELDDYRNLLFHSEEKLKEFQESEREKTGIQ----------K 446
Query: 402 CIVYIHQI-GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
V +Q+ GY + + + ++ + ++ S+ Y T + +E + +
Sbjct: 447 LRVGFNQVFGYYIEVPKGQVKNVPDYYIRKQTLVNSER--------YITQELKEFEEKIM 498
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K+ +E+++ +L + + D L +ELD +LA+VA Y +P T
Sbjct: 499 SAREKVELIEKSLFEELKQKLSEYIDGLRNLAQKLSELDAISNLAMVARLYGYTKPKFTG 558
Query: 521 EPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
++N RH + E V F+ ND +D+ R+ I+TGPN SGKS YI+QV LI ++
Sbjct: 559 GEFY-VKNARHAVVERYVSDFVANDIYMDDRRRMYIVTGPNMSGKSTYIRQVGLIAVMAQ 617
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IGSFVPAD A + + D ++ +S+F+I++ +V ++L +AT +SL LLDE
Sbjct: 618 IGSFVPADDAEIPIFDRVFTRMGARDDISTGKSTFLIEMSEVALILEKATKKSLVLLDEV 677
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRP 692
G+GT T DGI + ++ ++ ++ + + TH TEL + E +K T+ V R
Sbjct: 678 GRGTSTFDGIS-IAWAMSEYIYNEIGCETMFATHFTELTELSDV--YEGIKNLTIEV-RE 733
Query: 693 ENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
NN +VFL+++V G A SYG+ A +AGVP V++RA +L+ +E+
Sbjct: 734 TNNG-----VVFLHKVVEGIADRSYGIEVAQIAGVPDGVVERAKEILDIISQKSELEK 786
>gi|55379190|ref|YP_137040.1| DNA mismatch repair protein MutS [Haloarcula marismortui ATCC
43049]
gi|55231915|gb|AAV47334.1| DNA mismatch repair protein MutS [Haloarcula marismortui ATCC
43049]
Length = 1022
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 220/782 (28%), Positives = 352/782 (45%), Gaps = 96/782 (12%)
Query: 4 YMACILH------GHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
Y+A ++ G G++ D + Q V ++ +D+++ L ++ + +
Sbjct: 219 YLAAVVREASRDSGDTYGIAATDVTTGQFQVTQL-DDADAGEALTELYTFGPAEILPGPE 277
Query: 58 TKSEESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++++ FL L+ R+D + L S+ F +A H +++E+
Sbjct: 278 LRNDDEFLDRLRERTDAA-----LTLHDSASFEPGRASH--------------TVREQFG 318
Query: 117 --YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
++S+ V VRA+G +L+ +E+ V TL A++T + +
Sbjct: 319 SETVDSVGIGDQNVAVRAAGAVLSYVEDTG-VGTL-------AAVT--RLQAYGERDHVD 368
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDAT L++ +T + S S+F ++ VT G RLL+ W RP +
Sbjct: 369 LDATTQRNLELTETMQGDSS---------GSLFDTIDHTVTAAGGRLLQQWLQRPRRNRA 419
Query: 235 NLNSRLNAISFFLCSEELMA--SLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
L R + ++ SE MA + ETL D+ + + S S A D A +++
Sbjct: 420 ELQRRQSCVAAL--SEAAMARERIRETLSDAYDLERLAARATSGS--ADARDLRAVQETL 475
Query: 293 CSLLHVNKIFEVGISESLREQLRLLNFDIVEK-AASCITTELAYVYELVIGIIDVNRSKE 351
L V V +E L E D ++ AA + EL LV R
Sbjct: 476 ALLGQVADA--VTETERLAESPLADALDGADREAADSLAAELDSA--LVADPPGTVRQ-- 529
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASL--ELVQLPHLCKEMFVPCIVYIHQI 409
G L + G D+LDE+ +E E+LE + E + HL + YI Q+
Sbjct: 530 ---GGLFKRGHDDDLDEIIDEHEAALEWLETLPDREKERTGITHLSVDRNKTDGYYI-QV 585
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDM 469
G D E+ Q + + +KR Y TP+ E + + + + DM
Sbjct: 586 GKSET-------DAVPEKYQHIKTLKN-----SKR--YTTPELDEKERDVLRLEERRHDM 631
Query: 470 ERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
E + L + + + L AELD F SLA+ A +N++ RP + L I+ G
Sbjct: 632 EYEHFQRLRARVAEHATLLQDVGRTLAELDAFASLAVHAVENDWARPAVVDGNELSIEAG 691
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E T + F+PND +D+D + I+TGPN SGKS Y++Q ALI L+ +GSFVPA +
Sbjct: 692 RHPVVEQTTE-FVPNDLYMDDDRQFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARS 750
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
ATVGL D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DG
Sbjct: 751 ATVGLVDGIFTRVGALDELAQGRSTFMVEMQELSNILHSATEESLVILDEVGRGTATFDG 810
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEG-CLPKSERLKFYTMSVLRPENNSTDVE 700
I + Y V + K L TH EL G LP E + P + +D
Sbjct: 811 ISIAWAATEYIVNS-IQSKTLFATHYHELTALGEELPTVENVHVAVDG--EPRSAGSD-G 866
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE-RWSHENISAQ 759
D+ FL + G SYG+H A LAGVP V+ R+ VL+ +++K +E R S +N
Sbjct: 867 DVTFLRTVRDGPTDRSYGVHVADLAGVPEPVVDRSQAVLDRLRDDKAIEIRGSEQNDGGT 926
Query: 760 DQ 761
Q
Sbjct: 927 TQ 928
>gi|417933705|ref|ZP_12577025.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
gi|340770275|gb|EGR92790.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
Length = 844
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 270/591 (45%), Gaps = 65/591 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+T +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISTAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMTEDISIQLITGPNMSGKSTYMRQLAMTAV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y + + K L TH EL + E L E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVNVHVA 736
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
L + + FL+++ PG A SYG+H A +AG+PAE++ RA +L
Sbjct: 737 TLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKIL 781
>gi|320529998|ref|ZP_08031074.1| DNA mismatch repair protein MutS [Selenomonas artemidis F0399]
gi|320137795|gb|EFW29701.1| DNA mismatch repair protein MutS [Selenomonas artemidis F0399]
Length = 861
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 275/570 (48%), Gaps = 70/570 (12%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++F +++ TPMG RLL++W P+L +++RL+A++ + + L L + L+ +
Sbjct: 278 TLFDVLDFTRTPMGTRLLKSWLEHPLLVPHRIDARLDAVAELVSASSLRGKLRDLLRSIY 337
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D +L + + S A D A S+ +L V S RLL +
Sbjct: 338 DFERLLTRIETQS--ANARDLVALRVSLAALPGVRAALSGAKS-------RLLM-----R 383
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFL 380
AA I T L+ I+D E G G ++R G+ DELDEL + + L
Sbjct: 384 AAEGIETFDDLRELLMAAIVD-----EPGLSVRDGGIIRMGYSDELDELHRFSHDSKSLL 438
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+E+ E + + I Y GY + + D + ++ A ++
Sbjct: 439 QEMEERERER-----TGIKTLKIGYNKVFGYYIEVRHSGSDRVPADYIRKQTLANAER-- 491
Query: 441 ETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA---AE 497
+ T + +E + + KI+ +E ++ +L + + L+ N A A
Sbjct: 492 ------FITEELKEFETKILGAQEKIVALEYSLFAELRDRV---KERLVPIQNVARMIAR 542
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLD----IQNGRHVLQE--MTVDTFIPNDTRIDND 551
+D S+A A Y+RP++ P D I++GRH L E + D F+PNDT + +
Sbjct: 543 VDVLQSMAEAAASYRYVRPVI--RPASDGEIIIKDGRHPLVERLLERDLFVPNDTHLSHG 600
Query: 552 G-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
G +ITGPN +GKS Y++QVAL+ ++ +GSFVPA +A + D S + +
Sbjct: 601 GTETMLITGPNMAGKSTYMRQVALLTLMAQVGSFVPARSAQIAPVDRIFTRIGASDDLVS 660
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
QS+FM+++++V +LR+AT SL +LDE G+GT T DG+ + + + T + K L
Sbjct: 661 GQSTFMVEMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEHIDT-RIHAKTL 719
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH EL ER++ Y ++V R + S +VFL R+V G A SYG+H A
Sbjct: 720 FATHYHELTEMA----GERIRNYCIAV-REKGRS-----VVFLRRIVAGAADKSYGIHVA 769
Query: 723 LLAGVPAEVIKRAAYVLEAAQNNKHVERWS 752
LAG+P +V++RA +L + +R +
Sbjct: 770 RLAGLPPKVMERAEEILNTLEQCAVTQRAA 799
>gi|83589961|ref|YP_429970.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
gi|123524598|sp|Q2RJG2.1|MUTS_MOOTA RecName: Full=DNA mismatch repair protein MutS
gi|83572875|gb|ABC19427.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
Length = 863
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 263/555 (47%), Gaps = 48/555 (8%)
Query: 196 GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMAS 255
G + +EG S+ +++K +T MG R LR W +P++D + R A++ + L
Sbjct: 281 GREQKREG-SLLWVLDKTLTAMGARTLRRWLDQPLVDAGAIKERQEAVAELVEGFILRQE 339
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLR 315
L E L+ V+D+ + + Y + SL + I E+ +SE L
Sbjct: 340 LRERLQVVRDLERLAGRVA-----YGTAGGRELQALRGSLAVIPGILEL-MSEVHSRLLA 393
Query: 316 LLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEE 375
+ + A V + I + G ++R G+ E+D+LR+
Sbjct: 394 QVRAQLDPLDDLVDLLGRALVDDPPASITE---------GGIIRTGYNGEVDKLREAATH 444
Query: 376 LPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAF 435
++ +ASLE + + + Y GY + + L + + A
Sbjct: 445 GRDW---IASLEAEERERTGIKSL--KVGYNRVFGYYIEVTRPNLPQVPADYERKQTLAN 499
Query: 436 SDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFA 495
++ + T + +EL+ + +++ +E + + L + +
Sbjct: 500 AER--------FVTRRLQELERQVLGAEERLVQLEYELFQGLREEVLGVLPRIQATARAL 551
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEM--TVDTFIPNDTRIDNDGR 553
LD +SLA VA NNY P + +++I+ GRH + E+ + TF+PNDT +D +
Sbjct: 552 GVLDALISLATVAVDNNYTCPRVDDGTVIEIEQGRHPVVELVGSPGTFVPNDTYLDQEQY 611
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I IITGPN +GKS YI+QVALIV L+ IGSFVPA A +GL D + + A QS
Sbjct: 612 IQIITGPNMAGKSTYIRQVALIVLLAQIGSFVPARRAHIGLVDRIFTRVGAADDIFAGQS 671
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCT 665
+FM+++ +V +L+ AT +SL +LDE G+GT T DG+ + Y + + L T
Sbjct: 672 TFMVEMQEVAGILKHATRRSLVILDEVGRGTSTADGLSIARAVTEYIHNV-IGARCLFAT 730
Query: 666 HLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLA 725
H EL++ + ++ Y ++VL + EDI FL +VPG SYG+H A LA
Sbjct: 731 HYHELVS--LAEELSGVRNYCVAVLE------EGEDITFLRTIVPGSTDKSYGIHVARLA 782
Query: 726 GVPAEVIKRAAYVLE 740
G+P +V++RA +LE
Sbjct: 783 GLPEQVLERAREILE 797
>gi|419718740|ref|ZP_14246046.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
gi|383305080|gb|EIC96459.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
Length = 880
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 296/636 (46%), Gaps = 96/636 (15%)
Query: 132 ASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKH 191
ASG +L L E ++S A I S+ ++ +D ++ L++ +T +
Sbjct: 235 ASGAMLRYL--------YEMQKSSCAQIV--SISAYKNGDYMIVDTSSRRNLELVETMRE 284
Query: 192 PSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEE 251
G S+ G+++K T MG R+LR++ +P+++ E + +R A++
Sbjct: 285 KKKNG--------SLLGVLDKTSTAMGARMLRSFLEQPLINRERILNRQEAVAELFERYI 336
Query: 252 LMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI-CSLLHVNKIFEVGISESL 310
L E L V D+ ++ + + T + T L S+ S+ + I EV
Sbjct: 337 DREELREYLNPVYDLERLMAR------VVTKNANTRDLLSLSASMKMIAPIKEV------ 384
Query: 311 REQLRLLNFDIVEKAASCITTELAYVYEL------VIGIID--VNRSKEKGY--GTLVRE 360
LN +C + E+ V E +I IID VN G ++
Sbjct: 385 ------LN--------NCTSGEIVRVNEGLDRLEDIIDIIDRAVNEDSPLSLKEGNIINT 430
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FE 417
G+ E+D+LRQ E +L ASLE + + I Y GY + F+
Sbjct: 431 GYNAEIDKLRQAKTEGKNWL---ASLEADEKEKTGIKNLK--IKYNKVFGYYFEVTNSFK 485
Query: 418 EKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDL 477
+ + D F T Y T +EL+N++ K+ ++E + ++
Sbjct: 486 DMVPDY-----------FVRKQTLTNAERYTTDNLKELENIILGAEDKLNNLEYEVFTEV 534
Query: 478 VSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMT 537
+ + + + A +D SLA VA+ NNY RP + ++DI++GRH + E
Sbjct: 535 RDTVADNVNRIQSSAKSLAYIDAICSLATVAYNNNYTRPQINTNGVIDIKDGRHPVVESM 594
Query: 538 V--DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGL 594
+ D+FI NDT +D N R++IITGPN +GKS Y++Q ALI ++ IGSFVPA A++ +
Sbjct: 595 LGDDSFIANDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICMMAQIGSFVPASQASLCV 654
Query: 595 TD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLG 646
D S + + QS+FM+++ +V +LR AT SL +LDE G+GT T DG+ +
Sbjct: 655 CDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVILDEIGRGTSTFDGLAIAW 714
Query: 647 GTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
+ + + K L TH EL EG LP + Y + V +N IVF
Sbjct: 715 AVVEHISNIKLIGAKTLFATHYHELSELEGTLPG---VNNYCILVKERGDN------IVF 765
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
L ++V G A SYG+ A LAGVP V +RA ++E
Sbjct: 766 LRKIVTGGADKSYGIQVAKLAGVPESVTERAKELIE 801
>gi|262196608|ref|YP_003267817.1| DNA mismatch repair protein MutS [Haliangium ochraceum DSM 14365]
gi|262079955|gb|ACY15924.1| DNA mismatch repair protein MutS [Haliangium ochraceum DSM 14365]
Length = 880
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 197/763 (25%), Positives = 343/763 (44%), Gaps = 90/763 (11%)
Query: 4 YMACIL-HGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTK--S 60
Y+A I G R G+S+ D S + E+ +S+ L+D + + +P+ I + +
Sbjct: 130 YLAAIACEGGRYGLSFLDVSTGEFRATEL----DSEDGLLDELA-RVRPREILAGARNLA 184
Query: 61 EESFLSALKRS-DGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
E L+A +R + T +P ++ QA L+ L + G L ++ERI
Sbjct: 185 EGGPLTATQRDFNQVTYSPV------EPHTWGQAKTLLVSL-LAGDSASLGLEERILASR 237
Query: 120 SMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATA 179
+ D+ + G+L V L+ E G+ + LD A
Sbjct: 238 AAADVIGYARSTQPTGVLPV-------SRLQLYEPGDT---------------MMLDEAA 275
Query: 180 HEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSR 239
L++ +T IG + G ++ ++++ T G RLLR+W L P+ ++ + R
Sbjct: 276 IANLELTETL-------IGGRRAG-TLLSVIDETCTAPGGRLLRHWLLYPLSEVAPIRRR 327
Query: 240 LNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTASDWTAFLKSICSL 295
+A+ +F+ L S+ E L+ V D+ + + +P + D L S+ +L
Sbjct: 328 QDAVGYFVEHASLRRSVREVLEGVHDLERLAARVGLGVATPRDLGRLRDSLVQLPSLSAL 387
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
L + + + G L LL F+ + I ELA + L+ + G
Sbjct: 388 L-ASPVVQAGGESPLDAVPALLRFN------NAILGELAELQGLLSRALVDEPGPLAREG 440
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
+R G+C +DE R + + E + + + E + + + Y GY + +
Sbjct: 441 GFIRAGYCRIVDESRSLADGSKEAILAIETRERER-----TGIGSLKVKYNRVFGYYIEV 495
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITR 475
+ L E ++ A + Y T + EL+ + ++L+ E+ +
Sbjct: 496 TKANLARVPAEYVRKQTIATGER--------YVTTELAELETKVLGAQERLLEREQELFA 547
Query: 476 DLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
+L + + + L A +DC +LA +AH +Y P + L+I GRH + E
Sbjct: 548 ELCAAVGERAGGLRDVGERVAGIDCLANLAEIAHVRDYRCPEVDDGERLEIVEGRHPVVE 607
Query: 536 MTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
TV T F+PND ++D + +I +ITGPN +GKS Y++QVA IV L+ +GSFVPA A V
Sbjct: 608 RTVPTGRFVPNDCQLDPREAQILLITGPNMAGKSTYMRQVAQIVVLAQMGSFVPAKRARV 667
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
G+ D + ++ +S+FM+++ + ++R AT +SL +LDE G+GT T DG+ +
Sbjct: 668 GIVDRVYTRVGAADNLARGESTFMVEMRETSAIMRGATRRSLVVLDEVGRGTSTFDGVSI 727
Query: 645 LGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
Y + + L TH EL C R + +S+ E+ DIVF
Sbjct: 728 AWAVTEYLHDA-IGARTLFATHYHEL----CALSEVRPRVRNVSMAIREHEG----DIVF 778
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
L ++V G A SYG+ A LAG+P ++ RA +L + +
Sbjct: 779 LRQVVAGGASKSYGIEVARLAGLPRSLVSRARQILAQLEGGRE 821
>gi|325955087|ref|YP_004238747.1| DNA mismatch repair protein mutS [Weeksella virosa DSM 16922]
gi|323437705|gb|ADX68169.1| DNA mismatch repair protein mutS [Weeksella virosa DSM 16922]
Length = 864
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/615 (26%), Positives = 287/615 (46%), Gaps = 74/615 (12%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+ L++++ +D L++ Q P+H +G S+ ++N+ T MG RLL +W
Sbjct: 257 IDLSQYVWMDPFTIRNLELVQ----PAH------PKGVSLLDILNQTTTAMGGRLLNHWM 306
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SPSFIYTA 282
+ + D + + +RL + + L + L + LK + D+ K + SP +
Sbjct: 307 VTILKDRKLIENRLAFVEYLLKKDALRDEIRNQLKQLSDVERFAAKISTAKISPKQLMQL 366
Query: 283 SDWTAFLKSICS--LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+D + I S + H+N I S TELA + + +
Sbjct: 367 ADSLKIIAEIQSTCIQHINTILAHFFSSD---------------------TELAQIADFI 405
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
+ + G ++R+G ELD LR+I +FL+++ E+ ++ +
Sbjct: 406 YKQLSEDPPHLITRGNVIRKGVSSELDRLREIQYSGKDFLDKMRDREI-------EKTGI 458
Query: 401 PCI--VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
P I + + GY + + D + ++ +R KT E +
Sbjct: 459 PSIKIAFNNVFGYYIEVRNTHKDKVPSDWIRKQTLV------NAERYITEELKTYE-QQI 511
Query: 459 LGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL 518
LG +IL +E + +DL+ + + + + A LD + A +A + Y +P L
Sbjct: 512 LG-AEERILAIETQLFQDLIEKLIAKINTIQQNAQQIAFLDVVSTFAEIAFRFQYQKPSL 570
Query: 519 TLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVAL 574
LDI+NGRH + E +D ++PND I+ D +I +ITGPN SGKS ++Q AL
Sbjct: 571 NDGFDLDIRNGRHPVIEQFLDPGTEYVPNDVLINKTDQQILMITGPNMSGKSALLRQTAL 630
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
IV L+ +G +VPAD+A++G+ D S ++++ +S+FM+++++ +L + +SL
Sbjct: 631 IVILAQLGCYVPADSASIGIVDRIFTRVGASDNISSGESTFMVEMNETASILNNISERSL 690
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYT 686
LLDE G+GT T DGI + + PK L TH E LNE ER+K +
Sbjct: 691 ILLDEIGRGTSTYDGISIAWAIAEFLHNHPTRPKTLFATHYHE-LNEMA-ATMERIKNFN 748
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+SV +N ++F+ +LV G + S+G+H A +AG+P V+ R+ +L+ + +
Sbjct: 749 ISVKELKNK------VLFVRKLVAGGSEHSFGIHVARMAGMPQSVVIRSEEILKVLEKSH 802
Query: 747 HVERWSHENISAQDQ 761
E + DQ
Sbjct: 803 QSESMNDRTKQLSDQ 817
>gi|251778099|ref|ZP_04821019.1| DNA mismatch repair protein MutS [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082414|gb|EES48304.1| DNA mismatch repair protein MutS [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 941
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 283/583 (48%), Gaps = 59/583 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + + G S+ +++K T MG R LR W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKTKKG--------SLLWVIDKSATSMGGRTLRKWIDEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ + RL+ + S L LK + DI I+ K ++ + A D + S
Sbjct: 310 VKDEIEKRLSGVEEVFNSIGFNEDLRSALKEIYDIERIVGKISNKNV--NAKDLLSLKSS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + ++ + SE L+ N D EL V +L+ I +
Sbjct: 368 LDKLPCIKELLKDTSSELLKGYYE--NLD-----------ELIDVRDLLNDSIKEDPGLG 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ + +DELRQ E+ +A+LE + K + V Y G
Sbjct: 415 IKEGNIIKDGYNNLVDELRQSKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYNSIPEGRYIRKQTLANAERFITEELKVME-DKILGS-EEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+I ++ I L K+ ++LD +LALVA +N+Y++P + + L+ I +GR
Sbjct: 522 YSIFVEIRDKIEKEISRLKKSARIISDLDGISTLALVALENDYIKPEINTDGLIKITDGR 581
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ D + +ITGPN +GKS Y++QVALI ++ +GSFVPA
Sbjct: 582 HPVVEKVIGKGDFVSNNTALNQTDKELLLITGPNMAGKSTYMRQVALITLMAQMGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS SL LLDE G+GT T
Sbjct: 642 TSANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSNSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y D+ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITKNKDLRCKTLFATHYHELVKLEGILPG---VKNYSVAVKKLKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+VFL ++V G A SYG+ A LAG+P VI RA +L+
Sbjct: 757 ----VVFLRKIVEGGADESYGIEVAKLAGLPENVINRAREILD 795
>gi|306828748|ref|ZP_07461940.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
gi|304428926|gb|EFM32014.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
Length = 844
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/596 (27%), Positives = 270/596 (45%), Gaps = 63/596 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIHYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 EDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ L I Y + + K L TH EL + + K+ + V
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESILKN----LVNVHV 735
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
E + + FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 736 ATLEQDG----QVTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQ 787
>gi|406586640|ref|ZP_11061567.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
gi|419813732|ref|ZP_14338544.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|419817182|ref|ZP_14341350.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404466312|gb|EKA11656.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404472665|gb|EKA17082.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|404473892|gb|EKA18216.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
Length = 844
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 272/600 (45%), Gaps = 65/600 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ VI + FL++D +L + + + G S+F ++++ T MG R
Sbjct: 238 LKPVIHYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMR 289
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR+W RP++D E + R + FL + L ++LK V DI + + SF
Sbjct: 290 LLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGK 346
Query: 281 T-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
T D ++ S+ + I E G+ + L + D + + S I+ +A
Sbjct: 347 TNPKDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPH 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 405 VIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGIS 448
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y + GY + +L + + S+ G T EL +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIE 497
Query: 460 GDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
GD+ K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 498 GDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRP 557
Query: 517 ILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVAL 574
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 558 EFGDDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLAM 617
Query: 575 IVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ +GS+VPA++A + + D+ + + QS+FM+++ + + AT SL
Sbjct: 618 TAVMAQLGSYVPAESAHLPIFDTIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSL 677
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
L DE G+GT T DG+ L I Y + + K L TH EL + E L E L
Sbjct: 678 ILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVNV 733
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
++ L + + FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 734 HVATLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQ 787
>gi|307152088|ref|YP_003887472.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7822]
gi|306982316|gb|ADN14197.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7822]
Length = 892
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 184/684 (26%), Positives = 313/684 (45%), Gaps = 88/684 (12%)
Query: 118 LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLK 174
L S+ +G E + +RA+GGLL E I DT + + + + + +L +FL
Sbjct: 259 LKSLEGLGCEELTLAIRAAGGLL-----EYIEDTQKAHQ-----VPLQPLKTYNLTEFLV 308
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD L+I T + S+ G S+ +++ T MG R LR W P+L ++
Sbjct: 309 LDYQTRRNLEITSTVRDNSYYG--------SLLWALDRTATAMGGRALRRWLSEPLLSIK 360
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ +RL+ I + L L + L+ + D+ I + + + A + A +S+
Sbjct: 361 GITARLDTIEELKENPSLRTDLRQLLRDIYDLERITGRVGAGTA--NARELLALAQSLVR 418
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL-AYVYELVIGIIDVNRSKEKG 353
L + + + G S LR A I +L A E+V +++ K
Sbjct: 419 LTDLADLAKGGNSPYLR-------------ALQKIPPDLEALGKEVVAHLVETPPLHLKD 465
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G +LDE+R++YEE ++L EV+ + + +L I Y GY
Sbjct: 466 -GGVIQDGVNFQLDEMRRLYEEDQQWLANLEVSERQRTGISNLK-------IGYNKTFGY 517
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ + K D ++ T Y TP+ +E + + ++ ++E
Sbjct: 518 YISLPRAKADHAPENYIRKQTL--------TNEERYITPELKERETRIERAKDELHELEY 569
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
I L + + + + A +D LA VA +Y RP +T +++I +GRH
Sbjct: 570 QIFSQLRAKVAEKAQEIRNIAKAVAAIDVLAGLAEVAVYQSYSRPQITEGRIIEITDGRH 629
Query: 532 --VLQEMTVDTFIPNDTRIDN--DGRIN-----------IITGPNYSGKSIYIKQVALIV 576
V Q + + F+PN T + + +I+ I+TGPN SGKS Y++QV LI
Sbjct: 630 PVVEQSLGMGFFVPNSTNLGSLPPSKISEGNNQDYPDLIILTGPNASGKSCYLRQVGLIQ 689
Query: 577 FLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IGSFVPA AA +G+ D + QS+FM+++++ +L AT SL L
Sbjct: 690 LMAQIGSFVPAKAALLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATPNSLVL 749
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMS 688
LDE G+GT T DG+ + Y ++ + + TH E LNE S + Y ++
Sbjct: 750 LDEIGRGTATFDGLSIAWAVAEYLA-AEIQARTIFATHYHE-LNELASILSN-VANYQVT 806
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
V N +I+FL+++ PG A SYG+ LAG+P+ VI RA V+ + + +
Sbjct: 807 VKEMPN------EIIFLHQVRPGGADKSYGIEAGRLAGLPSVVIDRARQVMTQIEKHSKI 860
Query: 749 ERWSHENISAQDQ-QYKNAVEKML 771
+ I + + K + EKML
Sbjct: 861 ALGLRQGIQKVNPIKNKKSREKML 884
>gi|95929133|ref|ZP_01311877.1| DNA mismatch repair protein MutS [Desulfuromonas acetoxidans DSM
684]
gi|95134631|gb|EAT16286.1| DNA mismatch repair protein MutS [Desulfuromonas acetoxidans DSM
684]
Length = 869
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 271/555 (48%), Gaps = 54/555 (9%)
Query: 200 AKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHET 259
K S+ G +++ VT MG R LR W +P++D + + R +S + + L L +
Sbjct: 285 GKRQGSLLGALDRTVTAMGGRKLRQWINQPLIDCQAIVQRHELVSELVDAPLLRDELGQC 344
Query: 260 LKYVKDIPHILKKFNSPSFIYTASDWTAF---LKSICSLLHVNKIFEVGISESLREQLRL 316
L V D+ + + + S A D A L+ + +++ + + +L ++
Sbjct: 345 LDDVYDLERLSARISMAS--ANAKDLVALRHSLEQLPAIIAQASELQSTMGTTLAGEIDP 402
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L+ D++ ++ I +V G L+R+G+ +ELDELR I E
Sbjct: 403 LD-DVLRLISASIADNPPFVLR---------------EGGLIRDGYHEELDELRLISREG 446
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFS 436
++ + E Q + + + GY + + + ++ + +E +
Sbjct: 447 KSWIIGLEKKEREQ-----TGINTLKVRFNKVFGYYIDVPKTQISKVP----ESYERKQT 497
Query: 437 DMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAA 496
+ E Y TP+ +E ++ + +++ +E + + + S + + + A
Sbjct: 498 LANSER----YFTPELKEYEDKVLGAEERLVALEYELFQQIRSQVAAQGARIQQTAEALA 553
Query: 497 ELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTV-DTFIPNDTRIDND-GR 553
+LD + A VAH+ NY++P++ L I+ GRH V++ M + + FIPND ++D + +
Sbjct: 554 QLDVMVCFAAVAHERNYVQPVMDQGTALTIEEGRHPVIESMNLGERFIPNDVQLDTETDQ 613
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
+ IITGPN +GKS +++QVALI ++ +GS VPA +A +G+ D S ++ QS
Sbjct: 614 LLIITGPNMAGKSTFMRQVALITLMAQVGSLVPAKSAHIGVVDRIFTRVGASDNLARGQS 673
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD-VPPKVLVC 664
+FM+++ + +L ATS+SL +LDE G+GT T DG+ + Y D V K L
Sbjct: 674 TFMVEMSETANILNHATSRSLIILDEIGRGTSTFDGVSIAWAVAEYLHDNDQVAAKTLFA 733
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + ER+ + ++V R N+ IVFL ++V G A SYG+ A L
Sbjct: 734 THYHELTDLAL--TRERIANFNIAV-REWNDQ-----IVFLRKIVAGGASHSYGIQVARL 785
Query: 725 AGVPAEVIKRAAYVL 739
AG+P VI RA VL
Sbjct: 786 AGLPDAVIGRAKEVL 800
>gi|374595151|ref|ZP_09668155.1| DNA mismatch repair protein MutS [Gillisia limnaea DSM 15749]
gi|373869790|gb|EHQ01788.1| DNA mismatch repair protein MutS [Gillisia limnaea DSM 15749]
Length = 874
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 162/611 (26%), Positives = 289/611 (47%), Gaps = 78/611 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ ++ +++ +D L+++Q++ A+ ++ ++++ ++PMG R
Sbjct: 255 IASINRIAEEEYVWMDRFTIRNLELYQSN----------AQNAVTLLDVIDQTISPMGGR 304
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
+L+ W P+ + E + +R + F+ + + + + +K + D+ ++ K +
Sbjct: 305 MLKRWLALPLKNAEKIRNRHKVVGHFIENRPELDKIQQQIKKISDLERLISKVAT----- 359
Query: 281 TASDWTAFLKSIC--SLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYE 338
IC +LH+N E + ++ L D E+A I +L
Sbjct: 360 ---------GKICPREVLHLNNSLEAIVP------IKSLAMDSSEEALKVIGDKLQNCEV 404
Query: 339 LVIGIID-------VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQL 391
L I I + VN K G + +GF ELDELR + E+L+ + E +
Sbjct: 405 LRIKIKETLHEDAPVNILK----GNTIAKGFHPELDELRALAFSGKEYLDGMLQRE-TKA 459
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ VY GY + + D ++ ++ Y T +
Sbjct: 460 TGISSLKIGSNNVY----GYYIEVRNSHKDKVPEAWIRKQTLVNAER--------YITEE 507
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KI +E+AI LV + + + + A+LDC S A A
Sbjct: 508 LKEYEGKILGAEEKIQQLEQAIFGKLVDWLGDYIQPVQQNARLVAQLDCLCSFACHAISE 567
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSI 567
NY P++ L+I++GRH + E + ++++ ND +D + + I +ITGPN SGKS
Sbjct: 568 NYTEPVIDDSLELEIKDGRHPVIEKQLPMGESYVTNDLFLDRETQQIIMITGPNMSGKSA 627
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALIV L+ +GSFVPA +A +GL D S +++ +S+FM+++++ +L
Sbjct: 628 ILRQTALIVLLAQMGSFVPAKSARIGLIDKIFTRVGASDNISMGESTFMVEMNETASILN 687
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS 679
+++SL LLDE G+GT T DGI + Y PK L TH EL + G K
Sbjct: 688 NISNRSLVLLDEIGRGTSTYDGISIAWAITEYLHEHPARPKTLFATHYHELNDMGETFK- 746
Query: 680 ERLKFYTMSVLRPENNSTDVEDIV-FLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
R+K Y +SV +++D V FL +LV G + S+G+H A +AG+P +VI RA +
Sbjct: 747 -RIKNYNVSV-------KELKDTVLFLRKLVAGGSEHSFGIHVAKMAGMPQQVISRANKI 798
Query: 739 LEAAQNNKHVE 749
L+ + + +E
Sbjct: 799 LKKLEKSHQIE 809
>gi|345019807|ref|ZP_08783420.1| DNA mismatch repair protein MutS [Ornithinibacillus scapharcae
TW25]
Length = 867
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/590 (28%), Positives = 282/590 (47%), Gaps = 69/590 (11%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
+ L+++L LD + L++ +T I R K S+ +++K VT MG R+L+ W
Sbjct: 248 LELDQYLSLDMYSKRNLELTET--------ILRNKRHGSLLWVLDKTVTAMGSRMLKKWL 299
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
RP+LD + +RL A+ F + +L ++LK V D+ + + + A D
Sbjct: 300 ERPLLDKVLIENRLEAVEGFYHAFMERDALRDSLKSVYDLERLAGRIAFGNV--NARDLI 357
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLN-FDIVEKAASCITTELAYVYELVIGIID 345
KS L + +I E+ ++ +E + L N D E + T +A E I I +
Sbjct: 358 QLKKS---LNRIPEIKELLVTIDNQEIVNLANELDYPEDIVRILETSIAE--EPPISIKE 412
Query: 346 VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC--I 403
G+++++G+ D+LD R +++ E+ E +E + I
Sbjct: 413 ---------GSIIKDGYNDQLDSYRDASRNGKKWIAELEQRE-------KQETNIKSLKI 456
Query: 404 VYIHQIGYLMCIFEEKL---DDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
+ GY + + + L + E+ Q T + TP+ +E + L+
Sbjct: 457 GFNRVFGYYIEVTKANLHLLPEGRYERKQTL----------TNAERFITPELKEKEQLIL 506
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+ K +D+E + ++ I + + +++D + A V+ NNY RP T
Sbjct: 507 EAEEKSVDLEYTLFTEIREQIKSKIPRIQTLADIVSKIDVLQAFATVSEANNYHRPSFT- 565
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ L I+NGRH + E +D TF+PND +D + +ITGPN SGKS Y++Q+ALI +
Sbjct: 566 DNRLHIKNGRHPVIEKVMDDGTFVPNDVELDEKKSMLLITGPNMSGKSTYMRQLALIAIM 625
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+G FVP D A + + D + + + QS+FM+++ + + AT++SL LLD
Sbjct: 626 GQVGCFVPCDEAELMIFDQIFTRIGAADDLVSGQSTFMVEMLETNHAIEHATNRSLILLD 685
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSV 689
E G+GT T DG+ L + Y + +V K L TH EL E LPK +
Sbjct: 686 EIGRGTSTYDGMALAQAIVEY-IHHNVKAKTLFSTHYHELTALEDSLPKLSNVH------ 738
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+R E +V VFL+++ G A SYG+H A LA +P +I RA+ +L
Sbjct: 739 VRAEEYEGNV---VFLHQIKEGAADKSYGIHVAKLASLPENLINRASVIL 785
>gi|422302520|ref|ZP_16389882.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9806]
gi|389788253|emb|CCI16220.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9806]
Length = 882
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 199/769 (25%), Positives = 335/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQNIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLGEIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VSYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ +E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNKLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|332663076|ref|YP_004445864.1| DNA mismatch repair protein mutS [Haliscomenobacter hydrossis DSM
1100]
gi|332331890|gb|AEE48991.1| DNA mismatch repair protein mutS [Haliscomenobacter hydrossis DSM
1100]
Length = 872
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 164/611 (26%), Positives = 301/611 (49%), Gaps = 72/611 (11%)
Query: 149 LEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFG 208
LE E+ N I S+ + ++++ LD L++ + P G+ S+
Sbjct: 240 LETTENKNLK-HISSITRIYPDRYVWLDRFTIRNLELLSS---PHETGV-------SLLK 288
Query: 209 MMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPH 268
+M++ V+PMG RLL+ W + P+ ++SRL +++FL +E+ + ++L+ + D+
Sbjct: 289 IMDQTVSPMGARLLKKWIVLPLKSKLAIDSRLEMVAYFLETEDKGREVEKSLRLMGDLER 348
Query: 269 ILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASC 328
++ K P + +++ + VG L+E L +EK A
Sbjct: 349 LISKV--PLGKVNPRELVQLKRALIA---------VG---PLKEMLAGTGHLELEKIADG 394
Query: 329 ITTELAYVYELVIGIID---VNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVAS 385
+ V + I++ VN +K G ++ +GF ELDELR + E L +
Sbjct: 395 LNPCPGLVERIAKQIVEEPPVNLAK----GGVIADGFSSELDELRHVINHAKELLLGIQE 450
Query: 386 LELVQ--LPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETK 443
E+ + +P L + + GY + + + + T E ++ A ++
Sbjct: 451 KEVERSGIPSLK-------VGFNSVFGYYLEVTNKYKNQTPAEWIRKQTLANAER----- 498
Query: 444 RLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
+ T + + L+ + +ILD+E + ++LV + + + A LDC LS
Sbjct: 499 ---FITEELKVLEAKILGAEERILDLEERLFQELVLDLADYIHPVQHNATLLARLDCILS 555
Query: 504 LALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDND-GRINIITG 559
A VA ++ Y RP L+ E +DI+ GRH + E + + ++PND +D++ +I +ITG
Sbjct: 556 FAKVATRHQYCRPQLSEELEIDIREGRHPVIEQQLPLGEMYVPNDVFLDHEHQQILMITG 615
Query: 560 PNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDL 611
PN +GKS ++Q ALI ++ +GS+VPA +A +G+ D S ++++ +S+FM+++
Sbjct: 616 PNMAGKSALLRQTALICLMAQMGSYVPARSAHLGILDKVFTRVGASDNISSGESTFMVEM 675
Query: 612 HQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTEL 670
++ ++ + +SL LLDE G+GT T DGI + Y PK L TH E
Sbjct: 676 NETASIMNNISDRSLILLDEIGRGTSTYDGISIAWSIAEYLHNNPFARPKTLFATHYHE- 734
Query: 671 LNEGCLPKSERLKFYTMSVLRPENNSTDV-EDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
LNE K R+K Y ++ + +V + ++FL +L G + S+G+H A +AG+P
Sbjct: 735 LNE-LSEKFSRIKNYHVA-------TKEVGQKVIFLRKLTAGGSQHSFGIHVAKMAGMPK 786
Query: 730 EVIKRAAYVLE 740
++ RA ++LE
Sbjct: 787 MIVDRANHILE 797
>gi|421489405|ref|ZP_15936787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
gi|400366037|gb|EJP19079.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
Length = 844
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 269/590 (45%), Gaps = 63/590 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D + + R + + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKKRIVQRQDVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALGYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAITAV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ IGS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQIGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ L I Y + + K L TH EL + G E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLGS--SLEHLVNVHVAT 737
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
L + T FL+++ PG A SYG+H A +AG+PAE++ RA +L
Sbjct: 738 LEQDGQVT------FLHKIEPGPADKSYGIHVAKIAGLPAELLARADKIL 781
>gi|299822955|ref|ZP_07054841.1| DNA mismatch repair protein MutS [Listeria grayi DSM 20601]
gi|299816484|gb|EFI83722.1| DNA mismatch repair protein MutS [Listeria grayi DSM 20601]
Length = 856
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 283/594 (47%), Gaps = 59/594 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
F+K+D + L++ ++++ G+ K+G ++ +++ T MG RLL+ W RP++
Sbjct: 253 FMKMDYYSKRNLELSESNR-------GKGKQG-TLLWLLDHTKTAMGGRLLKQWIDRPLI 304
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D E + R + ++ F+ + L E LK V D+ + + + A D S
Sbjct: 305 DKEIITQRQDDVAAFIRAFFERMDLVEHLKNVYDLERLAGRVAYGNV--NARDLIQLRNS 362
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ + + I S+SL+ I +K C EL + E IID
Sbjct: 363 LYQIPKIKAILASIESDSLQ--------TIADKLDPC--EELMTILEQ--AIIDSPPISI 410
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
+ G ++++G+ ++LD R ++ E+ S KE + I + ++G+
Sbjct: 411 R-EGGIIKDGYNEQLDTYRDASRNGKSWIAELES----------KEREITGIKSL-KVGF 458
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+F ++ T E + T Y TP+ +E + L+ + K +++E
Sbjct: 459 -NRVFGYYIEVTRANTHHLPEGRYERKQTLTNAERYITPELKEKEKLILEAEEKSVELEY 517
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ ++ + F L +E+DC S A V+ +N+++RP+L+ L ++ GRH
Sbjct: 518 QLFIEVREQVKSFIHRLQALAKLVSEIDCLQSFAEVSEKNHFIRPVLSETGKLSVKQGRH 577
Query: 532 VLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
+ E M +++ ND ++D+D I +ITGPN SGKS Y++QVAL + IG FVPA+
Sbjct: 578 PVVERVMGAQSYVANDCQMDDDREILLITGPNMSGKSTYMRQVALTAICAQIGCFVPAEE 637
Query: 590 ATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
AT+ + D + + A QS+FM+++ + + AT SL L DE G+GT T DG
Sbjct: 638 ATLPVFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVNATKDSLILFDEIGRGTATYDG 697
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ L I Y + +V K L TH EL + E + V E N
Sbjct: 698 MALAQAIIEY-IHENVKAKTLFSTHYHEL----TVLDQELASLANIHVSAVEENGK---- 748
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL-----EAAQNNKHVER 750
+VFL+++ G A SYG+H A LA +PA++IKRA+ +L E Q VE+
Sbjct: 749 VVFLHKIKEGPADKSYGIHVAQLAELPADLIKRASQILAELEAEKEQTTPQVEK 802
>gi|404493130|ref|YP_006717236.1| DNA mismatch repair protein MutS [Pelobacter carbinolicus DSM 2380]
gi|90109850|sp|Q3A4F1.1|MUTS_PELCD RecName: Full=DNA mismatch repair protein MutS
gi|77545194|gb|ABA88756.1| DNA mismatch repair ATPase MutS-1 [Pelobacter carbinolicus DSM
2380]
Length = 870
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 183/632 (28%), Positives = 294/632 (46%), Gaps = 86/632 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
VRA+GG +V +EQ + G A I ++ ++ LD + L++ T
Sbjct: 234 VRAAGG---------VVYYVEQTQKGVAG-HIRPLVTYHSRDYMVLDNSTRRNLELTATL 283
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ G S+ G++++ VT MG R +R W P++DL+ + R ++ +
Sbjct: 284 QDGGRKG--------SLLGVLDRTVTAMGGRKIRQWIHHPLVDLKAIRDRHLSVQELVGQ 335
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFI--YTASDWTAFLKSICSL----LHVNKIFE 303
+ L L V D L++ NS + A D A KS L H++++
Sbjct: 336 SLVRGDLRADLDGVYD----LERLNSKIAMGHANAKDLVALRKSFEKLPRILQHLDEL-S 390
Query: 304 VGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFC 363
++ + ++ L D+ E I + +V G L+ +G+
Sbjct: 391 APLAAGIGSRIDPLT-DMAELIGRAIVEDPPFVLR---------------EGGLMCDGYH 434
Query: 364 DELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIG--YLMCIFEEK 419
ELDELR I E++ E E + L K F Y ++ +L + E+
Sbjct: 435 LELDELRDIRRNGKEWIAKLEADERERTGIGSL-KVRFNKVFGYYIEVTRTHLGRVPEDY 493
Query: 420 LDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVS 479
TL +R F TP+ +E + + ++ D+E + +DL
Sbjct: 494 QRKQTL--------------ANAERFF--TPQLKEYEEKVLGAEDRLFDLEFELFQDLRE 537
Query: 480 HICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-VLQEMTV 538
+ + + + AELD LSLA VAH +Y+ P + L I++GRH V++ M +
Sbjct: 538 RVAEQGERVQRTAEALAELDVLLSLADVAHSCDYVCPTMDDSDRLVIRDGRHPVIEAMNL 597
Query: 539 -DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD 596
+ F+PND +D + +I +ITGPN +GKS Y++QVALI ++H+GS VPA +A +GL D
Sbjct: 598 GEHFVPNDVEMDCRENQIMVITGPNMAGKSTYMRQVALITLMAHMGSLVPAASAHIGLVD 657
Query: 597 --------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGT 648
S ++ QS+FM+++ + +L ATS+SL +LDE G+GT T DGI +
Sbjct: 658 RIFTRVGASDNLAQGQSTFMVEMTEAAHILNHATSRSLIVLDEIGRGTSTFDGISIAWAV 717
Query: 649 INYF-VTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYR 707
Y V K L TH EL + + ER+K ++V R N E I+FL +
Sbjct: 718 AEYLHDNGHVAAKTLFATHYHELTD--LILTCERVKNLNIAV-REWN-----EQIIFLRK 769
Query: 708 LVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+V G A SYG+ A LAG+P VI RA +L
Sbjct: 770 IVKGPASHSYGIQVARLAGLPVAVIDRAKEIL 801
>gi|239906766|ref|YP_002953507.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus RS-1]
gi|239796632|dbj|BAH75621.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus RS-1]
Length = 887
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 279/617 (45%), Gaps = 85/617 (13%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
V+L + + LD L+IF+ GR G +++ ++++ TPMG RLL
Sbjct: 264 VNLGRHMLLDEVTERNLEIFRRLD-------GRKGRG-TLWHVLDRTQTPMGGRLLETML 315
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTA--SD 284
+P LDL ++ A++ F E L + E L V D+ ++ + F+ A D
Sbjct: 316 RQPWLDLGPIHETQEAVALFAEDESLRRLVREDLAGVYDLERLITRI----FLGRAVPRD 371
Query: 285 WTAFLKSICSLLHVNK----IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+TA +S+ +L + + + +L L+ + + + + V E
Sbjct: 372 FTALRQSLAALPALRQRLSGAASAKAASALLSGWDDLDDLFELLSRALVDSPPVLVTE-- 429
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLEL--VQLPHLCKEM 398
G L R G+ ELDEL + E + L+E+ + E LP L K
Sbjct: 430 --------------GGLFRAGYHPELDELLDLAEHGEQKLQELLAREQEDGNLPKL-KLG 474
Query: 399 FVPCIVYIHQI----GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
F Y ++ GY FE + E+ Y TP +E
Sbjct: 475 FNRVFGYYFELSKAAGYAPAHFERRQTLANCER-------------------YVTPALKE 515
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
L++ L K +E + R+L H+ + +++ A LD + LA A ++
Sbjct: 516 LEDKLLASGEKRKTLEYNLFRELRDHVAGLRERVMETAARVARLDVWQGLAEAAVAGDWT 575
Query: 515 RPILTLEPLLDIQNGRHVLQEMT--VDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQV 572
RP L + I+ GRH + E V +IPND +D R+ +ITGPN +GKS ++Q
Sbjct: 576 RPELHAGQAIAIRAGRHPVVEAVTGVGNYIPNDVSLDESTRMLLITGPNMAGKSTVLRQT 635
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALI L+ IGSFVPA A+VGL D S ++ QS+FM+++ + +LRQA +
Sbjct: 636 ALIAILAQIGSFVPAAKASVGLVDRVFCRVGASDNLAQGQSTFMVEMMETARILRQAGKK 695
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKV--LVCTHLTELLN-EGCLPKSER 681
SL +LDE G+GT T DG+ L + D V L TH EL EG +P
Sbjct: 696 SLVILDEIGRGTATFDGLALAWAVVEELCGRDDGHGVRTLFATHYHELTALEGRIPG--- 752
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV--- 738
LK ++V + DI+FL RL+PG A SYG+ A LAGVP V+KRA +
Sbjct: 753 LKNANIAVKEWKG------DIIFLRRLLPGPADRSYGVEVAKLAGVPRNVVKRAREILGE 806
Query: 739 LEAAQNNKHVERWSHEN 755
LE+ ++ R + E
Sbjct: 807 LESCRDPAQAARGNRER 823
>gi|313676390|ref|YP_004054386.1| DNA mismatch repair protein muts [Marivirga tractuosa DSM 4126]
gi|312943088|gb|ADR22278.1| DNA mismatch repair protein MutS [Marivirga tractuosa DSM 4126]
Length = 867
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 267/557 (47%), Gaps = 49/557 (8%)
Query: 203 GFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKY 262
G + +++K +TPMG R ++ W + P+ D + RL + F +++L L +LK
Sbjct: 287 GIPLIQILDKTLTPMGSRQIKKWMVLPVKDKAVIEERLQIVEAFHSNQDLTEQLSASLKS 346
Query: 263 VKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIV 322
+ D+ ++ K + K++ ++ + K E ++L++ +N
Sbjct: 347 MGDVERLISKVAVGRV--NPRELNQLKKALGLMVPLKKALEESEEQALKKLSNQINL--- 401
Query: 323 EKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEE 382
C Y+YEL+ + + G L+REG ELD+L++I ++L +
Sbjct: 402 -----C-----EYLYELIDSQLMEDAPLHTNQGNLIREGVDPELDDLKKIAFSGKDYLLQ 451
Query: 383 VASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGET 442
+ E+ + + + Y GY + + D E ++ ++
Sbjct: 452 LQKREMEKTG-----ITSLKVAYNKVFGYYLEVTNSHKDKVPQEWIRKQTLVNAER---- 502
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
Y T + +E + + K++ +E+ I + L+ + F + + A++DC L
Sbjct: 503 ----YITEELKEYEEKILGAEDKMVVIEQRIFQSLLQNAMDFVSPIQQNAKIIAQVDCLL 558
Query: 503 SLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIIT 558
S A +A N+Y++P ++ LDI+ GRH + E + + +IPND +DN+ + I IIT
Sbjct: 559 SFAEIARANDYVKPQISETTALDIKLGRHPVIEQQLPHGEEYIPNDVFLDNESQQIMIIT 618
Query: 559 GPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMID 610
GPN +GKS ++Q ALIV ++ +G +VPA +A +GL D S +++ +S+FM++
Sbjct: 619 GPNMAGKSALLRQTALIVLMAQMGCYVPAKSAEIGLVDKVFTRVGASDNLSKGESTFMVE 678
Query: 611 LHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTE 669
+ + +L + +SL L+DE G+GT T DG+ + + + K L TH E
Sbjct: 679 MTETASILNNLSDRSLVLMDEIGRGTSTYDGVSIAWSIVEFLHNHPKSKAKTLFATHYHE 738
Query: 670 LLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPA 729
L R+K Y +SV + +I+FL +L G + S+G+H A LAG+P
Sbjct: 739 L--NQLAHDFPRIKNYNVSVKEIDG------EIIFLRKLKKGGSEHSFGIHVAHLAGMPN 790
Query: 730 EVIKRAAYVLEAAQNNK 746
V+ RA ++ + +K
Sbjct: 791 PVVLRANEIMHHLEKDK 807
>gi|156835926|ref|XP_001642215.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
gi|190359850|sp|A7TTQ1.1|MSH3_VANPO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|156112674|gb|EDO14357.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1023
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 174/607 (28%), Positives = 281/607 (46%), Gaps = 84/607 (13%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
K + L+A A E+L IF G S+F +++ T G R LR W L P+
Sbjct: 418 KHMVLNAAAIESLGIF-----------GEEGGKGSLFWLLDHTRTSFGSRKLREWILHPL 466
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETL-KYVKDIPHILKKFNSPSFIYTA-SDWTAF 288
LD + + RL+A+ + E+ E+L K + ++P +L+ N ++ T+ + F
Sbjct: 467 LDKKEIEDRLDAVDCII--HEVSNIFFESLNKMLTNVPDLLRTINRIAYGTTSRKEIYYF 524
Query: 289 LKSICSL-----LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYV------- 336
LK + S LH N + +S R + K+++ +T L +
Sbjct: 525 LKQMKSFSDHFQLHSNYLNSQVVSNDGR----------IHKSSALLTNLLTEITSGLKEI 574
Query: 337 -YELVIGIIDVNRSKEKGYGTLVREGFC----DELDELRQIYEELPEFLEEVASLELVQL 391
E ++ +I+V+ EK V E F D +E+ +I + E E+A +L
Sbjct: 575 NIENILSMINVSSVMEKDTYKQVSEFFNLNYYDHAEEIIKIQGNINEVKNELAE----EL 630
Query: 392 PHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ K + P + Y ++ YL+ + Q +G + ++ YHTP
Sbjct: 631 SSIRKILKRPHLNYKDEMDYLIEVRNT--------QTKGLPSDWIVVNRTKMISRYHTPT 682
Query: 452 TREL--------DNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLS 503
+R+L D L + + + I D + L K +N A DC L+
Sbjct: 683 SRKLIEKLQYQKDILYQETQKEYFQFVKRIKNDYFA--------LNKIINHIATYDCILA 734
Query: 504 LALVAHQNNYMRPILTLEP-LLDIQNGRHVLQEMTVDTFIPNDTRIDND-GRINIITGPN 561
LA + NY+RP+LT E +D +N R+ + E ++PND + + G+ IITGPN
Sbjct: 735 LASTSQNMNYVRPVLTDESQFIDAKNARNPIIESLDINYVPNDVNLSHSAGKFLIITGPN 794
Query: 562 YSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQ 613
GKS YI+QVAL+V L+ +GS+VPAD + D ++ QS+F ++L +
Sbjct: 795 MGGKSSYIRQVALLVILAQVGSYVPADFMKTSIFDKILTRIGAYDNLLKGQSTFKVELLE 854
Query: 614 VGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNE 673
+ +++ T SL LLDE G+GT TEDG + ++YF+ V P VL TH L
Sbjct: 855 IQNIIKNKTENSLLLLDEVGRGTSTEDGKAISYSIVDYFINLPVCPLVLFTTHYPFL--- 911
Query: 674 GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIK 733
G + S+ LK Y M + + D IVFLY+L G S+GL+ A LA + ++I
Sbjct: 912 GSI-NSKILKSYYMDFVEQKKEGEDWPSIVFLYKLRSGITDSSFGLNVARLAQIDKDIIN 970
Query: 734 RAAYVLE 740
A + E
Sbjct: 971 HAFSISE 977
>gi|448390488|ref|ZP_21566111.1| DNA mismatch repair protein MutS [Haloterrigena salina JCM 13891]
gi|445666902|gb|ELZ19554.1| DNA mismatch repair protein MutS [Haloterrigena salina JCM 13891]
Length = 891
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 274/594 (46%), Gaps = 62/594 (10%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
+ + LDAT L++ +T + +EG S+F ++ T G RLL+ W RP
Sbjct: 259 DDHVTLDATTQRNLELTET--------MQGEREG-SLFATIDHTETSAGGRLLKEWLQRP 309
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
LE L R +++ + L + L D+ + K AS +A
Sbjct: 310 RRSLETLERRQESVAALSSAALARDELQDRLDEAYDLARLASK---------ASHGSADA 360
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLN---FDIVEKAASCITTELAYVYELVIGIIDV 346
+ + S+ + ++E++ L DIV++ +EL E I
Sbjct: 361 RDLLSVRQTLAVLPA-LAETIESNPDLAASPLSDIVDRPDRDAASELREALEEAIADEPP 419
Query: 347 NRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIV 404
+ + G L + G+ DELDE+ +EE+ +L+ +A E Q L H+ +
Sbjct: 420 STVTQGG---LFQRGYDDELDEVIDRHEEVKRWLDTLADREKKQYGLSHVTVDRNKTDGY 476
Query: 405 YIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYH 464
YI Q+G G + ++ + T + E + + +
Sbjct: 477 YI-QVGKSAA--------------DGVPDHYEEIKTLKNSKRFTTDELEEKEREILRLEE 521
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPL 523
+ D+E + +L + ++ LL+ V A A +D SLA A +N +++P L +
Sbjct: 522 QRGDLEYELFEELREEVAARAE-LLQDVGRALATVDALASLATHAAENRWVQPELHRDDR 580
Query: 524 LDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGS 583
LD++ GRH + E T + F+PND R+D + ++TGPN SGKS Y++QVA IV L+ IGS
Sbjct: 581 LDVEQGRHPVVEQTTE-FVPNDVRLDEERGFLVVTGPNMSGKSTYMRQVAGIVLLAQIGS 639
Query: 584 FVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKG 635
FVPA++A +GL D + +S+FM+++ ++ +L AT +SL +LDE G+G
Sbjct: 640 FVPAESAEIGLVDGIFTRVGALDELAQGRSTFMVEMSELSNILHTATEESLVILDEVGRG 699
Query: 636 TLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENN 695
T T DGI + Y +V K L TH EL G K R+ + V E +
Sbjct: 700 TATYDGISIAWAATEYL-HNEVQAKTLFATHYHELT--GLAEKLPRVA--NVHVAADERD 754
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL + G SYG+H A LAGVP V++R+ VLE + K +E
Sbjct: 755 G----DVTFLRTVRDGPTDRSYGIHVADLAGVPDPVVERSRDVLERLREEKAIE 804
>gi|256819680|ref|YP_003140959.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea DSM 7271]
gi|256581263|gb|ACU92398.1| DNA mismatch repair protein MutS [Capnocytophaga ochracea DSM 7271]
Length = 860
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 278/566 (49%), Gaps = 52/566 (9%)
Query: 197 IGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASL 256
+G S+ +++K ++PMG R L+ W P+ L+ + R + +FL +++ +
Sbjct: 275 VGNTTPSVSLLDVIDKTLSPMGSRTLKRWLALPLKKLDKIRQRHEVVDYFLKHIDVLEQV 334
Query: 257 HETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRL 316
L ++ DI ++ K + + ++ SL H+ I ++ ++ S E L L
Sbjct: 335 KTALSHMGDIERLISKVATLKI-----NPREVVQLRASLEHIPLIKQLCLA-SANESLTL 388
Query: 317 LNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEEL 376
L +K SC A + E + VN +K G + +GF ELDELR +
Sbjct: 389 LG----DKLHSCEQLS-ARIAETLSEDAPVNIAK----GNAIAKGFSAELDELRGLSHSG 439
Query: 377 PEFLEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFA 434
+L+++ E + +P I + GY + + D + ++
Sbjct: 440 KSYLDDLLLRE-------SQRTGIPSLKIDSNNVFGYYIEVRNTHKDKVPPDWIRKQTLV 492
Query: 435 FSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNF 494
++ Y T + +E + + KI +E+++ +L++ I + +
Sbjct: 493 NAER--------YITGELKEYETKILGAEEKIAQLEQSLYAELIAFISEYIGQVQTNATL 544
Query: 495 AAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH--VLQEMTVDT-FIPNDTRIDND 551
+LDC S A +A +NNY RP + ++I++GRH + +++ V T +I ND +D +
Sbjct: 545 IGQLDCLCSFATLAMENNYHRPEMNEGYAIEIKDGRHPVIEKQLPVGTPYIANDVYLDRE 604
Query: 552 -GRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTA 602
+I +ITGPN SGKS ++Q ALIV L+ IGSFVPA A +G+ D S +++
Sbjct: 605 RQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAATAQLGIVDKIFTRVGASDNISM 664
Query: 603 EQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
+S+FM+++++ ++L + +SL LLDE G+GT T DGI + Y K L
Sbjct: 665 GESTFMVEMNEAALILNNISDRSLVLLDEIGRGTSTYDGISIAWAIAEYLHEHPSKAKTL 724
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH E LNE + ER+K Y +SV +++ ++FL +L G + S+G+H A
Sbjct: 725 FATHYHE-LNEMS-EQFERIKNYNVSVKETKDS------VLFLRKLTEGGSAHSFGIHVA 776
Query: 723 LLAGVPAEVIKRAAYVLEAAQNNKHV 748
+AG+P VI++A +L+ + + +V
Sbjct: 777 KMAGMPQYVIQKANKMLKKLEESHNV 802
>gi|373460577|ref|ZP_09552328.1| DNA mismatch repair protein mutS [Prevotella maculosa OT 289]
gi|371955195|gb|EHO72999.1| DNA mismatch repair protein mutS [Prevotella maculosa OT 289]
Length = 887
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 162/593 (27%), Positives = 285/593 (48%), Gaps = 73/593 (12%)
Query: 201 KEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETL 260
++G S+ +++K VT MG R+LR W + P+ D+ + RL+ + +F E ++E L
Sbjct: 297 EDGSSLLNVIDKTVTAMGGRMLRRWLVFPLKDVFPITERLDIVDYFFQKPEFRQLINEQL 356
Query: 261 KYVKDIPHILKKFN----SPSFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
V D+ I+ K SP + A D +K C + +G EQ
Sbjct: 357 HRVGDLERIISKVAVGRVSPREVVQLRNALDAVRPIKEACLYAENEALKRIG------EQ 410
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
L L E + I E+ +I G ++ +G +ELDELR +
Sbjct: 411 LNL-----CESIKNRIEKEIQPDPPQLIA-----------KGDVIADGCNEELDELRALS 454
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQG 430
+ +++ + E + + + Y + GY + + F+ K+ +T + +
Sbjct: 455 KNSKDYVLNIQEREAEKTGITSLK-----VGYNNVFGYYLEVRNTFKSKVPNTWVRK--- 506
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
+ +R Y T + +E ++ + KIL +E + +L+ + F +
Sbjct: 507 ------QTLAQAER--YITQELKEYEDKILGADEKILALEARLFSELILAMQDFIPQIQI 558
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTR 547
N A +DC LS A + N Y+RP++ ++DI+ GRH + E + + ++PND
Sbjct: 559 NANLLARIDCLLSFAKTSEDNGYIRPVIDDSEVIDIRQGRHPVIETQLPLGERYVPNDVY 618
Query: 548 IDNDGR-INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+D + + + +ITGPN +GKS ++Q ALIV L+ +G FVPA+ A +GL D S
Sbjct: 619 LDTEKQQVMMITGPNMAGKSALLRQTALIVLLAQVGCFVPAERANIGLVDKIFTRVGASD 678
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDV 657
+++ +S+FM+++ + +L +S+SL L DE G+GT T DGI + + Y
Sbjct: 679 NISLGESTFMVEMTEASNILNNVSSKSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKA 738
Query: 658 PPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
+ L TH E LNE + K+ R+K Y +SV + I+FL +L+ G + S
Sbjct: 739 RARTLFATHYHE-LNE--MEKNFHRIKNYNVSVKEIDGK------IIFLRKLMKGGSEHS 789
Query: 717 YGLHCALLAGVPAEVIKRAAYVL-EAAQNNKHVERWSHENISAQDQQYKNAVE 768
+G+H A +AG+P ++KRA +L E +N V R N +A+ +++ +E
Sbjct: 790 FGIHVAEIAGMPRSIVKRANVILKELEADNAGVGRAGKPN-TAKIAEHREGME 841
>gi|306826023|ref|ZP_07459359.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431739|gb|EFM34719.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 844
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 273/601 (45%), Gaps = 73/601 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + S I+ +A
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELESLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 404 HVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 STLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
GD+ K ++E I + + + L A +D SLA+VA + +R
Sbjct: 497 EGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P + +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGDDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 MTAVMAQLGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L E L
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVN 732
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
++ L + T FL+++ PG A SYG+H A +AG+PAE++ RA +L +N
Sbjct: 733 VHVATLEQDGQVT------FLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILAQLEN 786
Query: 745 N 745
Sbjct: 787 Q 787
>gi|335030594|ref|ZP_08524082.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
gi|334265885|gb|EGL84376.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
Length = 843
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 166/599 (27%), Positives = 273/599 (45%), Gaps = 75/599 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ VI + FL++D +L + + + G S+F ++ + T MG R
Sbjct: 238 LKPVIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLAETKTAMGMR 289
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR+W RP++D E + R + FL + L E+LK V DI + + SF
Sbjct: 290 LLRSWIQRPLIDKERILERQEVVQVFLDYFFERSDLTESLKGVYDIERLASRV---SFGK 346
Query: 281 T-ASDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAY 335
+ D ++ S+ + I E G+ + L EQL D + + + I+ +A
Sbjct: 347 SNPKDLLQLATTLGSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELENLISAAIAP 400
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HL 394
VI G ++R GF + LD+ R++ E ++ E+ + E H
Sbjct: 401 EAPHVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGIHT 449
Query: 395 CKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRE 454
K I Y + GY + +L + + S+ G T E
Sbjct: 450 LK------IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEE 492
Query: 455 LDNLLGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
L + G++ K ++E I + + + L A +D LA+VA +
Sbjct: 493 LARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVLQGLAVVAEKQ 552
Query: 512 NYMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYI 569
+ +RP E + IQNGRH + E M T+IPN ++D D I +ITGPN SGKS Y+
Sbjct: 553 HLIRPEFGEESRIAIQNGRHAVVEKVMGAQTYIPNSIQMDEDASIQLITGPNMSGKSTYM 612
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q+A+ V ++ +GS+VPA++A + + D + + + QS+FM+++ + + A
Sbjct: 613 RQLAITVIMAQMGSYVPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHA 672
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSE 680
T SL L DE G+GT T DG+ L I Y + + K L TH EL + E L
Sbjct: 673 TEDSLILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLEASLEHLV 731
Query: 681 RLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
+ T+ E N + FL+++ PG A SYG+H A +AG+PA+++ RA +L
Sbjct: 732 NVHVATL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPADLLARADAIL 781
>gi|390948203|ref|YP_006411963.1| DNA mismatch repair protein MutS [Alistipes finegoldii DSM 17242]
gi|390424772|gb|AFL79278.1| DNA mismatch repair protein MutS [Alistipes finegoldii DSM 17242]
Length = 902
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 168/601 (27%), Positives = 284/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++ +D L++F ++ A+E S ++++ +TPMG R
Sbjct: 269 ITSISRIDQEDYVWVDKFTIRNLELFSSNG---------AREKCSFADVIDRTLTPMGGR 319
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W PI D + RL+ + F+ +L + E + V D+ I S I
Sbjct: 320 LLKRWIAMPIKDPVKIGERLDVVEKFVRDADLADVVREQVALVGDMERI------ASRIA 373
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYE 338
A L + + L ++ + + + QL L D++E I E+ Y
Sbjct: 374 AARVTPRELVQLKNSLFAVELLKAALESTDDAQLHALAGQIDLLEGVRDRIAREI-YPDP 432
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCK 396
L N +KG ++ +G ELD+LR+I ++L + E +P L
Sbjct: 433 L-------NNQIQKG--GVIADGVDPELDDLRRIALHGKDYLARIQQRESEATGIPSLK- 482
Query: 397 EMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
I Y + GY + + +EK+ +T + + Q A Y T + +
Sbjct: 483 ------ISYNNVFGYYIEVRNAHKEKVPETWIRK-QTLANAER----------YITEELK 525
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + K+L +E+ I D++ HI HLL+ A +DC S A +A + Y
Sbjct: 526 EYEEKILGAEEKMLVIEQRIYADIIDHISRSLSHLLRDAAVVARIDCLQSFARLACERRY 585
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
+RP+L L+DI+ GRH + E + + ++PND +D+ + +I +ITGPN SGKS +
Sbjct: 586 VRPVLDDGKLIDIRQGRHPVIETLLPVGEEYVPNDVMLDDKEQQIMMITGPNMSGKSALL 645
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI+ ++ +GSFVPA +A +G+ D S +++ +S+FM+++ + +L
Sbjct: 646 RQTALIILMAQMGSFVPAKSAHIGVVDKIFTRVGASDNISQGESTFMVEMLESASILNNI 705
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTEL--LNEGCLPK 678
+ +S+ LLDE G+GT T DGI + + Y K L TH EL + + C
Sbjct: 706 SDRSIVLLDEIGRGTSTYDGISIAWAMVEYLHNHPSAHAKTLFATHYHELNEMEQMC--- 762
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
R+K + +SV N IVFL +L G S+G+H A +AG+P V+ RA +
Sbjct: 763 -PRVKNFHVSVKEMGNQ------IVFLRKLERGGTEHSFGIHVARMAGMPVSVVSRADEI 815
Query: 739 L 739
L
Sbjct: 816 L 816
>gi|239608178|gb|EEQ85165.1| DNA mismatch repair protein Msh5 [Ajellomyces dermatitidis ER-3]
Length = 910
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 204/812 (25%), Positives = 357/812 (43%), Gaps = 150/812 (18%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
QV MA + VG YY ++ ++L++LE + ++ I+ +K QP ++ ST++
Sbjct: 89 QVVMAMDMKERCSVGCCYYVAAEQKLYLLE--DITSGGLEAIETLKLDVQPTLVLLSTRA 146
Query: 61 EESFLSALKRSDGTTEAPT-----------VKLVKSSIFSYEQAWHRLIYL--------- 100
++S + + G A V+ V+ F++E A +L L
Sbjct: 147 DQSTPNLGQTGLGMHTADNGDQFQLPYHLDVRPVQE--FNFEGAKLKLASLPLSTSRSET 204
Query: 101 RVTGMDDGLSIKE--------------RICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
R D S+K+ R+ L+ +DM + + + +G ++ L+ +R
Sbjct: 205 RFLVPGDTFSLKQNGDENDLGFTDHQGRLLNLSGSIDMDNRISIGCAGAIITYLQRKRAA 264
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----A 200
+ L + SG+ I S+ SL + ++ +LQ+ Q++ HP+ + G G+ A
Sbjct: 265 ECLTRDSSGSELFNIKSLEMRSLRDTMFVNTDTLTSLQVIQSESHPNAFNQGPGKTSPGA 324
Query: 201 KEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLH 257
KE S++G+ + TP G+ LR FLRP D ++ + IS +L + E + L
Sbjct: 325 KESLSIYGLFHHFARTPHGKTRLRQRFLRPSTDAAHIKEGHDFISTYLRPDNGECIEKLT 384
Query: 258 ETLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
++LK +K++ H+ K +S + + + AF + + L + + +++R
Sbjct: 385 KSLKGIKNLRPVMVHVQKGISSGN-----AKFKAFKSGVWATLLEFAFHAIDVHDTIRTV 439
Query: 314 LRLLNFDIVEKAASCITTELAY-VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ N DI +A + + + V ++ +D+ S ++ + T+V+ ELD+L++
Sbjct: 440 MGAENLDIHLRALEKLDVAILHQVGRIIHETVDLQSSIDE-HRTVVKPRVDRELDDLKET 498
Query: 373 YEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
Y L L +VA +P L ++ V +Y Q+G+ + + LD+ G
Sbjct: 499 YNGLDSLLNQVAINIAGTIPSRLSNDVNV---IYFPQLGFNIAM---PLDERGRAVYDGG 552
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
E + + R+++ + RE+D GDIY I + E I ++ ++ L+ A
Sbjct: 553 EQPWDQVFTTENRVYFKDFRMREMDEKFGDIYGLICEKEIEIVYEMAQNVLQHEKFLVDA 612
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-DN 550
+ ++D H+L E+TV TFIPNDT I
Sbjct: 613 SDICGDIDS------------------------------HLLYEVTVPTFIPNDTLIVGG 642
Query: 551 DGRIN-------------------------IITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+GR ++TGPNYSGKS + +++ H
Sbjct: 643 NGREGSPPNTSTQSLETSVEVAETQCPSMLLLTGPNYSGKS-----GSNCLYVPH----- 692
Query: 586 PADAATVGLTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
QSSFMIDL Q+ L AT SL ++DEFGKGT + DG GL
Sbjct: 693 ---------------RETQSSFMIDLQQISFALNLATEHSLVIIDEFGKGTESTDGAGLA 737
Query: 646 GGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G Y ++ + PKVL TH E+ G LP + L F M V + + + +VE+ +
Sbjct: 738 CGLFEYLLSLGEKRPKVLAATHFHEIFENGFLPPRKELDFGYMEV-QVDPAAREVENQVT 796
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+LY G + S+G +CA L G+ +I RA
Sbjct: 797 YLYNFRSGRSNASFGTNCAALNGIDQAIISRA 828
>gi|374323831|ref|YP_005076960.1| DNA mismatch repair protein mutS [Paenibacillus terrae HPL-003]
gi|357202840|gb|AET60737.1| DNA mismatch repair protein mutS [Paenibacillus terrae HPL-003]
Length = 938
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 286/588 (48%), Gaps = 69/588 (11%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
N F+ LD L++ +T + R+K+G S+ ++++ T MG RLLR W +P
Sbjct: 254 NHFMILDPFTRRNLELVETVRE-------RSKKG-SLLWLLDRTETSMGARLLRRWIDKP 305
Query: 230 ILDLENLNSRLNAISF----FLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW 285
+L + RL A+ F+ E++ A L E + D+ ++ + S A D
Sbjct: 306 LLSSHLIEERLEAVDKLYHQFIFREDVRAQLKE----IYDLERLVGRIAFGS--ANARDL 359
Query: 286 TAFLKSICSLLHVNKIFEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYELVIGI 343
A S+ + + ++ SE+LR + L+ D+ C E A E I +
Sbjct: 360 IALKLSLTRIPALRELCAESESETLRRIAQTLDSCTDL------CALIEEAVADEPPISV 413
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
D G L++EG+ LDELR+ ++ E+ + E V + I
Sbjct: 414 RD---------GGLIKEGYHQRLDELREASVNGKRWIAELEAKERV-----ATGIRSLKI 459
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + ++ + L L + +R Y TP+ +E ++L+ +
Sbjct: 460 GYNKVFGYYI-----EVTKSNLASLPEGRYERKQTLANAER--YITPELKEKESLILEAE 512
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
K++D+E ++ +L S + L K AE+D + SLA V+ + +++P LT
Sbjct: 513 DKMVDLEYSLFSELRSKLNTEIPRLQKLAERVAEIDVYQSLASVSAERGFVKPELTTGYD 572
Query: 524 LDIQNGRHVLQE--MTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSH 580
++ GRH + E M +FI N T ++ D I +ITGPN +GKS Y++QVALI ++
Sbjct: 573 FVVEQGRHPVVEAVMKDGSFIANGTALEEADAHILLITGPNMAGKSTYMRQVALIAIMAQ 632
Query: 581 IGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
IG FVPA A V + D + + QS+FM+++ + +M +AT +SL ++DE
Sbjct: 633 IGCFVPAAHAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDEL 692
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLKFYTMSVLR 691
G+GT T +G+ + I FV + K LV TH EL + L +S L+ Y+M+V
Sbjct: 693 GRGTSTSEGMAIAQAVIE-FVHDTIGCKALVSTHFHELAH---LEQSLSSLRNYSMAV-- 746
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
S D + FL +L+ G A SYG++CA LAG+P +I+RA +L
Sbjct: 747 --QESGD--KVNFLRKLILGAASSSYGIYCARLAGLPDNIIERANGLL 790
>gi|418634041|ref|ZP_13196439.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU129]
gi|420189481|ref|ZP_14695455.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM037]
gi|420204218|ref|ZP_14709778.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM015]
gi|374838033|gb|EHS01590.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU129]
gi|394262031|gb|EJE06816.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM037]
gi|394274232|gb|EJE18657.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM015]
Length = 873
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 162/609 (26%), Positives = 289/609 (47%), Gaps = 54/609 (8%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYDRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVL 690
E G+GT T DG+ L I Y V K L TH EL + + K + +
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEY 739
Query: 691 RPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
+ E ++FL+++ G SYG+ A LA +P EVI RA +L A + K +
Sbjct: 740 QGE--------LIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QKPSYQ 790
Query: 751 WSHENISAQ 759
SH++ Q
Sbjct: 791 LSHQDTDNQ 799
>gi|187935238|ref|YP_001886016.1| DNA mismatch repair protein MutS [Clostridium botulinum B str.
Eklund 17B]
gi|238691604|sp|B2TIC3.1|MUTS_CLOBB RecName: Full=DNA mismatch repair protein MutS
gi|187723391|gb|ACD24612.1| DNA mismatch repair protein MutS [Clostridium botulinum B str.
Eklund 17B]
Length = 942
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 283/583 (48%), Gaps = 59/583 (10%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ ++ + + G S+ +++K T MG R LR W P++
Sbjct: 258 YMTIDGNSRRNLELTESIREKTKKG--------SLLWVIDKSATSMGGRTLRKWIDEPLI 309
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ + RL+ + S L LK + DI I+ K ++ + A D + S
Sbjct: 310 VKDEIEKRLSGVEEVFNSIGFNEDLRSALKEIYDIERIVGKISNKNV--NAKDLLSLKSS 367
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + ++ + SE L+ N D EL V +L+ I +
Sbjct: 368 LDKLPCIKELLKNTSSELLKGYYE--NLD-----------ELIDVRDLLNDSIKEDPGLG 414
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHL-CKEMFVPCIVYIHQIG 410
G ++++G+ + +DELR+ E+ +A+LE + K + V Y G
Sbjct: 415 LKEGNIIKDGYNNLVDELRESKLHGKEW---IAALENREREFTGIKSLKVG---YNKVFG 468
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + ++ + + + +R K E D +LG K++++E
Sbjct: 469 YYI-----EISKSNYNSIPEGRYIRKQTLANAERFITEELKVME-DKILGS-EEKLINLE 521
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
+I ++ I L K+ ++LD +LALVA +N+Y++P + + L+ I +GR
Sbjct: 522 YSIFVEIRDKIEEEISRLKKSARIISDLDGISTLALVALENDYIKPEINTDGLIKIIDGR 581
Query: 531 HVLQEMTVDT--FIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + F+ N+T ++ D + +ITGPN +GKS Y++QVALI ++ +GSFVPA
Sbjct: 582 HPVVEKVIGKGDFVSNNTALNQTDKELLLITGPNMAGKSTYMRQVALITLMAQMGSFVPA 641
Query: 588 DAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
+A + + D S + +S+FM+++ +V +L+ ATS SL LLDE G+GT T
Sbjct: 642 TSANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSNSLVLLDEVGRGTSTY 701
Query: 640 DGIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNST 697
DG+ + I Y D+ K L TH EL+ EG LP +K Y+++V + +++
Sbjct: 702 DGLSIAWSVIEYITKNKDLRCKTLFATHYHELVKLEGILPG---VKNYSVAVKKLKDS-- 756
Query: 698 DVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+VFL ++V G A SYG+ A LAG+P VI RA +LE
Sbjct: 757 ----VVFLRKIVEGGADESYGIEVAKLAGLPENVINRAREILE 795
>gi|47225430|emb|CAG11913.1| unnamed protein product [Tetraodon nigroviridis]
Length = 658
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 179/317 (56%), Gaps = 22/317 (6%)
Query: 489 LKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTR- 547
+K ++ AELDC +++++ + + Y P LT E + + GRH L E+ F+PN +
Sbjct: 343 VKVLDLIAELDCLMAMSMASQEYGYTSPKLTHERRITVTRGRHPLLELCSPVFVPNSFQS 402
Query: 548 IDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDSKHMTAEQ--- 604
+D+ GR+ +ITGPN SGKSIY+KQV LIVF++ IGS VPA A +GL D + +
Sbjct: 403 LDSQGRVKVITGPNSSGKSIYLKQVGLIVFMALIGSDVPAKEAEIGLVDGIYTRMQSRES 462
Query: 605 -----SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFV---TCD 656
S+FMIDL+Q+ L +T SL L+DEFGKGT T DG+ LL +I++++ D
Sbjct: 463 VSVGLSTFMIDLNQMAQALNNSTGNSLVLIDEFGKGTNTVDGLSLLAASISHWLKKAAVD 522
Query: 657 VPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLS 716
V P VLV T+ LL G LP S L T+ + D +++VFLY+L G S
Sbjct: 523 V-PHVLVATNFHSLLQLGLLPSSGFLSLLTL------ETAVDGDELVFLYQLKEGICQSS 575
Query: 717 YGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDVL 776
Y + A LAG+ +++R V E + K +++ + Q ++ + VEK L+ +
Sbjct: 576 YAANIATLAGLAPSLVQRGVEVSELYRTGKPIKQIDTASTDKQAKRCRFVVEKFLSLHLD 635
Query: 777 KGDL---RLFFQDLLPS 790
D+ R +++LPS
Sbjct: 636 DADVDLQRFMKEEVLPS 652
>gi|298207616|ref|YP_003715795.1| DNA mismatch repair protein MutS [Croceibacter atlanticus HTCC2559]
gi|83850252|gb|EAP88120.1| putative DNA mismatch repair protein MutS [Croceibacter atlanticus
HTCC2559]
Length = 869
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 159/618 (25%), Positives = 293/618 (47%), Gaps = 66/618 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ ++ + ++ +D L+++Q G + + ++ +++K +PMG R
Sbjct: 252 ITSISRIAEDAYVWMDRFTIRNLELYQ----------GTSLQSVTLLDVIDKTTSPMGGR 301
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W P+ + E + R +++FL + L++ + +K + DI ++ K +
Sbjct: 302 TLKRWLALPLKNAEKIKKRHRVVNYFLKQKTLLSDVTSHIKQIGDIERLISKVATAKV-- 359
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
+ + S+ +++ + + +++L+ I + SC +L+
Sbjct: 360 SPREVIQLKNSLDAIVPIKTLALKSENDALKV--------IGDNLQSC---------DLL 402
Query: 341 IGIIDVNRSKEKGY----GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
G I ++E G+ + GF ELDELR I E+L++ ++Q
Sbjct: 403 RGKITETLNEEAPVNILKGSTIARGFSKELDELRDIRFSGKEYLDK-----MLQRETEAT 457
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+ I + GY + + D ++ ++ Y T + +E +
Sbjct: 458 GITSLKIASNNVFGYYIEVRNSHKDKVPENWVRKQTLVNAER--------YITEELKEYE 509
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
+ KI+ +E+ + LV+ I + + + + E+DC A A Q NY P
Sbjct: 510 AKILGAEEKIVQIEQELFSKLVTWISDYIKPVQQNAHLIGEIDCLCGFATQAMQENYCLP 569
Query: 517 ILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSIYIKQV 572
+T + L+I GRH + E + + +I ND ++ +D ++ +ITGPN SGKS ++Q
Sbjct: 570 EITEDYSLEITEGRHPVIEKQLPLGEPYITNDILLNRDDQQMIMITGPNMSGKSAILRQT 629
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALIV L+ +GSFVPA AA +GL D S +++ +S+FM+++++ +L + +
Sbjct: 630 ALIVLLAQMGSFVPAKAAKIGLVDKIFTRVGASDNISMGESTFMVEMNETASILNNLSDR 689
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKF 684
SL LLDE G+GT T DGI + Y K L TH E LNE ER+K
Sbjct: 690 SLVLLDEIGRGTSTYDGISIAWAISEYLHEHPAKAKTLFATHYHE-LNE-MTETFERIKN 747
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
Y +SV ++N ++FL +LVPG + S+G+H A +AG+P +V+ RA +L+ +
Sbjct: 748 YNVSVKELKDN------VLFLRKLVPGGSEHSFGIHVAKMAGMPQQVLHRANKILKKLEK 801
Query: 745 NKHVERWSHENISAQDQQ 762
+ E S + A +Q+
Sbjct: 802 SHSSEELSGQIKKATEQE 819
>gi|238022953|ref|ZP_04603379.1| hypothetical protein GCWU000324_02875 [Kingella oralis ATCC 51147]
gi|237865761|gb|EEP66899.1| hypothetical protein GCWU000324_02875 [Kingella oralis ATCC 51147]
Length = 853
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 261/604 (43%), Gaps = 88/604 (14%)
Query: 170 NKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRP 229
++++ LDA L+I T K+ ++F ++ C T MG RLL W P
Sbjct: 259 HQYIALDAATRRNLEITTTLS---------GKKAPTLFSTLDNCATHMGSRLLAQWLHHP 309
Query: 230 ILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFL 289
+ + +++ +RL+A++ L + L +LK + D+ I + S D +A
Sbjct: 310 LRNRDHIQARLDAVAALLA-DNTSTELSGSLKTIADLERIAARIALGS--ARPRDLSALR 366
Query: 290 KSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRS 349
S+ +L F + S L+ L AA + A + E + + D
Sbjct: 367 DSLLAL----ATFRLPQSPLLQ----TLGDSFPATAAIAEHLQRALLPEPSVWLKD---- 414
Query: 350 KEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQI 409
G ++ G+ ELDELR ++ E L ++ E I
Sbjct: 415 -----GNVINHGYHAELDELRHLHTHGSETLRQMEEQERQNT----------------GI 453
Query: 410 GYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYH------------TPKTRELDN 457
G L + ++ GF S E Y TP+ + ++
Sbjct: 454 GSLKLEYN---------RVHGFYIELSKAQAEHAPAHYQRRQTLKNAERFITPELKAFED 504
Query: 458 LLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPI 517
+ L +E+ + +L+ + + ++ AA LD S A A NY RP
Sbjct: 505 KYLAAQERSLALEKQLYEELLRQLQKELPKIQRSARAAATLDVLNSFAHTARSQNYTRPQ 564
Query: 518 LTLEPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
T L IQNGRH + E V F PN T++ R+ ++TGPN GKS Y++QVALI
Sbjct: 565 FTDHSSLHIQNGRHPVVEQQVQHFTPNHTQLTPSRRLTLLTGPNMGGKSTYMRQVALIAL 624
Query: 578 LSHIGSFVPADAATVGLTDSKH--------MTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+H GS++PA AAT+G D H + +S+FM+++ + +L AT+QSL L+
Sbjct: 625 LAHTGSYIPAQAATIGTIDQIHTRIGASDDLAGNRSTFMVEMSETAYILHHATAQSLVLM 684
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKF-YTMS 688
DE G+GT T DG+ L + ++ + L TH EL LP++ F +S
Sbjct: 685 DEVGRGTSTFDGLALAQAIAEHLISKNQ-SLTLFATHYFELTR---LPENHPSAFNMHLS 740
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAA---YVLEAAQNN 745
L +DIVFL+ + G A SYG+ A LAG+P+ + A LEA
Sbjct: 741 ALE------QGQDIVFLHHIEAGPAEKSYGIAVAKLAGIPSRTLNTARKHLAALEAQTAQ 794
Query: 746 KHVE 749
+H +
Sbjct: 795 QHPQ 798
>gi|166364904|ref|YP_001657177.1| DNA mismatch repair protein MutS [Microcystis aeruginosa NIES-843]
gi|189083160|sp|B0JFY0.1|MUTS_MICAN RecName: Full=DNA mismatch repair protein MutS
gi|166087277|dbj|BAG01985.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 882
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 200/774 (25%), Positives = 336/774 (43%), Gaps = 117/774 (15%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYSDISTGEFYTTQA-----SDLTALSLELSRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPALRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++REG +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIREGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VSYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----YHTPKTRELDNLLGDIYHKILD 468
+ K D F+ D K+ Y T + +E +N++ ++
Sbjct: 518 SLPRSKAD-------------FAPKDYVRKQTLVNEERYITTELKEKENIILTAVDELNK 564
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E I DL + FS + + A LD +LA +A Y RP + L+DI++
Sbjct: 565 LEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKD 624
Query: 529 GRH--VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHI 581
GRH V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+
Sbjct: 625 GRHPVVEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQT 684
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GSFVPA +A + + D + QS+FM+++++ +L AT +SL LLDE G
Sbjct: 685 GSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIG 744
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + Y T + + + TH EL + E + Y ++V
Sbjct: 745 RGTATFDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELP 801
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+ +IVFL+++ PG A SYG+ LAG+P VI RA V+ Q KH
Sbjct: 802 H------EIVFLHQVRPGGADKSYGIEAGRLAGLPTSVIDRAMQVM--GQIEKH 847
>gi|255101105|ref|ZP_05330082.1| DNA mismatch repair protein [Clostridium difficile QCD-63q42]
Length = 399
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 166/264 (62%), Gaps = 21/264 (7%)
Query: 496 AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV--DTFIPNDTRID-NDG 552
A +D F+SLA VAH NNY++P + LDI+NGRH + E V + F+PNDT ++ +
Sbjct: 6 ANIDVFVSLATVAHINNYVKPAINENNKLDIRNGRHPVVENIVGEENFVPNDTYLNRGEN 65
Query: 553 RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQ 604
INIITGPN SGKS Y++Q A+I ++HIGSFVPA++A + + D S ++ Q
Sbjct: 66 IINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTRVGASDDLSQGQ 125
Query: 605 SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVC 664
S+FM+++++V ++L+ AT +SL +LDE G+GT T DGI L + Y + ++ K L
Sbjct: 126 STFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEY-IQKNIRCKTLFA 184
Query: 665 THLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALL 724
TH EL + + + +K Y+++V D E I+FL +++P A SYG++ A L
Sbjct: 185 THYHELTD--LEEEFKEVKNYSIAV------KEDGEGIIFLRKIIPQGADKSYGIYVAKL 236
Query: 725 AGVPAEVIKRAAYVLEAAQNNKHV 748
A +P EVI+RA Y+L+ + N HV
Sbjct: 237 AKLPDEVIERAKYILKDLEKN-HV 259
>gi|342164735|ref|YP_004769374.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
gi|341934617|gb|AEL11514.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
Length = 844
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 166/601 (27%), Positives = 273/601 (45%), Gaps = 73/601 (12%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLGHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E G+ + L EQL D + + S I+ +A
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYLIEQL-----DGIPELESLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEM 398
VI G ++R GF D LD+ R++ E ++ E+ + E +
Sbjct: 404 HVIT-----------DGGIIRTGFDDTLDKYRRVLREGTGWIAEIEAKE-----RENSGI 447
Query: 399 FVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL 458
I Y + GY + +L + + S+ G T EL +
Sbjct: 448 STLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARI 496
Query: 459 LGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMR 515
GD+ K ++E I + + + L A +D SLA+VA + +R
Sbjct: 497 EGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIR 556
Query: 516 PILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVA 573
P + +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A
Sbjct: 557 PEFGDDSRIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLA 616
Query: 574 LIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQS 625
+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT S
Sbjct: 617 MTAVMAQMGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNS 676
Query: 626 LCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKF 684
L L DE G+GT T DG+ L I Y + + K L TH EL + E L E L
Sbjct: 677 LILFDELGRGTATYDGMALAQSIIEY-IHERIGAKTLFATHYHELTSLESSL---EHLVN 732
Query: 685 YTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
++ L + + FL+++ PG A SYG+H A +AG+PA+++ RA +L +N
Sbjct: 733 VHVATLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLEN 786
Query: 745 N 745
Sbjct: 787 Q 787
>gi|300088042|ref|YP_003758564.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527775|gb|ADJ26243.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 852
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 163/580 (28%), Positives = 270/580 (46%), Gaps = 58/580 (10%)
Query: 171 KFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPI 230
+F+ LD L+IF+ G S+ G+++ VT MG RLLR W +P+
Sbjct: 258 EFMALDDNTVTNLEIFRNATTGETAG--------SLLGVLDVTVTTMGARLLRRWLGQPL 309
Query: 231 LDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLK 290
L+ E + R +++++ A + LK D+ ++ + + F + A +
Sbjct: 310 LEAETIRKRQDSVAWLYHRHAERADIRHLLKGFADLERVINRVRA--FTAQPREIIALKR 367
Query: 291 SICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSK 350
S+ L + +R L D +L+ V L+ ++ +
Sbjct: 368 SLALLPKL---------------VRALGDDPATADIRHGLKDLSVVVSLIETALENEPTG 412
Query: 351 EKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIG 410
G G ++R GF ELDELR + +A LE + + Y H G
Sbjct: 413 NVGEGGIIRRGFSAELDELRDLAAGAKSH---IARLEAEERSATGIKSLKAG--YNHVFG 467
Query: 411 YLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDME 470
Y + + L ++ A ++ Y TP+ +E + + ++ E
Sbjct: 468 YYLEVSSANLSQVPERFIRKQTLANAER--------YITPELKEYEARILSSRERLEATE 519
Query: 471 RAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGR 530
I R ++ I ++ +L A A LD +LA VA +++Y++P + DI+ GR
Sbjct: 520 SDIYRRVLGQIAESAEAILTAAGAVARLDALAALAAVATEHDYVKPEIGEGIDTDIEGGR 579
Query: 531 HVLQE--MTVDTFIPNDTRI-DNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPA 587
H + E + FI NDTR+ +D R+ I+TGPN +GKS Y+KQ ALI ++ GSFVPA
Sbjct: 580 HPVVEAGLPPGRFIANDTRLTGSDDRLVILTGPNMAGKSTYLKQTALITLMAQTGSFVPA 639
Query: 588 DAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTE 639
A +G+TD + + +S+FM+++ + +L AT +SL +LDE G+GT T
Sbjct: 640 GRAVIGITDRIFTRIGAHEDLAGGKSTFMVEMVETANILANATDRSLLILDEIGRGTSTY 699
Query: 640 DGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDV 699
DG+ + + Y + + + L TH EL+ G E ++ ++V S D
Sbjct: 700 DGLAIARAVVEY-IHDHIGARTLFATHYHELV--GLGDSLEGVRNCNVAV------SEDR 750
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++VFL+R+VPG SYG+H A LAG+P VI+RA VL
Sbjct: 751 GEVVFLHRIVPGGVDRSYGIHVAKLAGLPKAVIRRANEVL 790
>gi|322392638|ref|ZP_08066098.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
gi|321144630|gb|EFX40031.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
Length = 844
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 175/632 (27%), Positives = 288/632 (45%), Gaps = 84/632 (13%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKTSLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D + + R + FL + L E+LK V DI + + SF +
Sbjct: 293 SWIQRPLIDKDRILERQEVVQVFLDYFFERSDLTESLKGVYDIERLASRV---SFGKSNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAYVYE 338
D ++ S+ + I E GI + L EQL D + + S I+ +A
Sbjct: 350 KDLLQLATTLGSVPRIRAILE-GIEQPALAYLIEQL-----DAIPELESLISAAIAPEAP 403
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLP-HLCKE 397
VI G ++R GF + LD+ R++ E ++ E+ + E H K
Sbjct: 404 HVIT-----------EGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKERENSGIHTLK- 451
Query: 398 MFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDN 457
I Y + GY + +L + + S+ G T EL +
Sbjct: 452 -----IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELAH 495
Query: 458 LLGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
+ G++ K ++E I + + + L A +D LA+VA + +
Sbjct: 496 IEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQPLAQGIATVDVLQGLAVVAENQHLI 555
Query: 515 RPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQV 572
RP + +DIQ GRH + E M T+IPN ++D + I +ITGPN SGKS Y++Q+
Sbjct: 556 RPEFGQDSKIDIQKGRHAVVEKVMGAQTYIPNSIQMDEETSIQLITGPNMSGKSTYMRQL 615
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
A+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT
Sbjct: 616 AITAVMAQMGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKN 675
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLK 683
SL L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 676 SLILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLEASLEHLVNVH 734
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQ 743
T+ E N + FL+++ PG A SYG+H A +AG+PA+++KRA +L
Sbjct: 735 VATL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPADLLKRADAIL---- 781
Query: 744 NNKHVERWSHENISAQDQQYKNAV-EKMLAFD 774
+E EN + +Q +N V E+M FD
Sbjct: 782 --TQLESQGQENPISINQ--RNVVNEQMSLFD 809
>gi|328948686|ref|YP_004366023.1| DNA mismatch repair protein mutS [Treponema succinifaciens DSM
2489]
gi|328449010|gb|AEB14726.1| DNA mismatch repair protein mutS [Treponema succinifaciens DSM
2489]
Length = 863
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 175/659 (26%), Positives = 298/659 (45%), Gaps = 94/659 (14%)
Query: 114 RICYLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLN-KF 172
++ LNS +V +G LL +E ++ NA ++ S I V + +F
Sbjct: 215 KVANLNSFSLTKESPEVPPAGFLLDYIE-----------KTTNAPVSHISGISVYQDSQF 263
Query: 173 LKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILD 232
+ +D ++ L+I + +++ ++ T MG RLLR+W P+ +
Sbjct: 264 VIIDDSSRRNLEI--------TFNLRDGTSSYTLLESVSNTKTAMGSRLLRSWLSFPLTN 315
Query: 233 LENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSI 292
+NSR N + F+ L+ + E L + D+ + + A D A S+
Sbjct: 316 ENEINSRQNHVELFVKDRNLLHCVRENLDGILDVERLAGRIAMDR--AHAKDLQALKASL 373
Query: 293 CSLLHVNKI-----FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
L + F + +S ++ + L+ I E A+ T
Sbjct: 374 KFWLKSQAVLERYDFSMPEKDSAQKIIDLIENSIAEDPATVFTE---------------- 417
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEV--ASLELVQLPHLCKEMFVPCIVY 405
G ++++G+ +ELD +++ + LEE + E + +L I
Sbjct: 418 -------GRIIKDGWSEELDYWKKVRNDFNGILEEYIESEKEKTGIQNLK-------IKS 463
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
+GY + + + KLD F + ++ E Y T K +EL+N L + K
Sbjct: 464 TGNLGYFIEVTKGKLDKIPPH----FIMRRTLLNAER----YTTEKLQELENSLNESGAK 515
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP-ILTLEPLL 524
IL++E + ++ + + + +L +A A +D S A A N+ RP +L+
Sbjct: 516 ILELEHNLFIEVRNELKKYIPYLQQAAKKIAYVDVVCSFAESAILYNWNRPHVLSDSLEF 575
Query: 525 DIQNGRH--VLQEMTVDTFIPNDTRI-----DNDGRINIITGPNYSGKSIYIKQVALIVF 577
++NGRH V + + F+PND + +N +ITGPN +GKS +++Q ALI
Sbjct: 576 SVKNGRHPVVERHLPAGEFVPNDVSLCGSEPENSASFALITGPNMAGKSTFLRQNALIAL 635
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
L+ GSFVPAD A +G+ D S ++ +S+F++++ + +LR AT SL ++
Sbjct: 636 LAQTGSFVPADEANIGIVDRIFCRVGASDNLARGESTFLVEMTETARILRSATQNSLVIM 695
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT TEDG+ + Y + + K TH EL + + LK M+V
Sbjct: 696 DEVGRGTSTEDGLSIAWAVSEYLLNT-LKCKTFFATHYHELTR----LEHKSLKRLCMAV 750
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHV 748
EN S DIVFL ++V G + SYG+H A LAG+P VI+RA +LE Q + V
Sbjct: 751 --AENGS----DIVFLRKVVEGSSENSYGIHVARLAGIPESVIERAGKILEKIQGDASV 803
>gi|428319738|ref|YP_007117620.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
gi|428243418|gb|AFZ09204.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
Length = 875
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 297/639 (46%), Gaps = 84/639 (13%)
Query: 130 VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTD 189
VRA+GGLL +E QKE ++++ + +L FL LD L+I QT
Sbjct: 271 VRAAGGLLQYIEET-------QKEK---AVSLQRLHTYTLTDFLILDYQTRRNLEITQTV 320
Query: 190 KHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCS 249
+ G S+ ++K T MG R LR W L+P+L+++ + +R + I + +
Sbjct: 321 RDGVFHG--------SLLWAIDKTSTAMGGRALRRWVLQPLLNIKGICARHDTIQELVEN 372
Query: 250 EELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISES 309
L L + L+ + DI + + S + +A D A S+ L + I GIS
Sbjct: 373 NGLRQDLQQLLRQIYDIERLTGRAGSGT--ASARDLVALADSLSKLPALASIAAQGISPY 430
Query: 310 LREQLRLLNFD-IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDE 368
L+ L N I+E+ A+ I L V E I + + G L+R G LDE
Sbjct: 431 LKA---LQNVPPILEELANTIHAHL--VDEPPIHLKE---------GGLIRSGINPMLDE 476
Query: 369 LRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLD----DTT 424
+R E+ +A+LE + + Y GY + I + K+D D T
Sbjct: 477 MRHTASADQEW---IANLEATERKRTGISNLK--VGYNKAFGYYISITKSKVDQVPKDYT 531
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+Q E +S + + + + T + +L+ L DI+ K+ R V
Sbjct: 532 RKQTLTNEERYSTEELKEREVRILTAR-EDLNQLEYDIFAKV--------RSEVGEQAEI 582
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT--FI 542
++ +AV A D LA VA NY RP +T + I G H + E ++ F+
Sbjct: 583 IRNVSRAV---AAADVLCGLAEVAVYQNYCRPTMTESREIKIIEGCHPVVEKSLPPGFFV 639
Query: 543 PNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDS 597
PN + + +N I+TGPN SGKS Y++QV LI ++ +GSFVPA AA++G+ D
Sbjct: 640 PNSAFLGREKSLNRPDLIILTGPNASGKSCYLRQVGLIQLMAQMGSFVPAKAASLGICDR 699
Query: 598 --------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTI 649
+ QS+FM+++++ +L AT QSL LLDE G+GT T DG+ +
Sbjct: 700 IFTRVGAVDDLATGQSTFMVEMNETANILNHATPQSLVLLDEIGRGTATFDGLSIAWSVA 759
Query: 650 NYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRL 708
Y T ++ + + TH EL + + + Y ++V ++ D IVFL+++
Sbjct: 760 EYLAT-EIRARTIFATHYHELNELASI--LDNVANYQVTV-------KELPDQIVFLHQV 809
Query: 709 VPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
PG A SYG+ LAG+P VI RA V++ Q KH
Sbjct: 810 QPGGADKSYGIEAGRLAGLPPSVIDRARQVMK--QIEKH 846
>gi|404371184|ref|ZP_10976492.1| DNA mismatch repair protein mutS [Clostridium sp. 7_2_43FAA]
gi|226912693|gb|EEH97894.1| DNA mismatch repair protein mutS [Clostridium sp. 7_2_43FAA]
Length = 933
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 275/586 (46%), Gaps = 57/586 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ +D + L++ + K S G S+ +++K T MG R +R W P++
Sbjct: 257 YMTIDGNSRRNLELTENLKEKSKKG--------SLIWVLDKTATSMGGRAIRKWIEEPLI 308
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
+ RL + + L LK + DI I+ K ++ + A D + S
Sbjct: 309 IKSEIEKRLEGVEELYNNAYFNEDLRSLLKEIYDIERIVGKISNKNA--NAKDLISLKCS 366
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L + S L+E + L+ EL + EL+ I + S
Sbjct: 367 LEKLPGIKSHLSEASSNILKEWYKDLD-------------ELTDIKELLSNSILDDPSIA 413
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G ++++G+ +E+D LR E+ +A+LE + + Y GY
Sbjct: 414 LKEGNIIKDGYNEEVDSLRTAKLHGKEW---IAALENRERDFTGIRSL--KVGYNKVFGY 468
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ ++ + + +R K E D +LG K++ +E
Sbjct: 469 YI-----EISKANYSSIPEGRYIRKQTLANAERFITQELKEME-DKILG-AEEKLVSLEY 521
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ ++ I L ++ LD +L+L+A +N+Y++P + + +++I GRH
Sbjct: 522 DLFIEIREAIEKEIARLKQSARIIGNLDALSTLSLIAVENDYVKPSINEDGIIEINEGRH 581
Query: 532 VLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E + F+ NDT ++ ND R+ +ITGPN +GKS Y++QVALI ++ IGSFVPA
Sbjct: 582 PVVEKVIGKGEFVSNDTTLNSNDNRLLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAK 641
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A + + D S + +S+FM+++ +V +L+ ATS+SL LLDE G+GT T D
Sbjct: 642 SANISICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYD 701
Query: 641 GIGLLGGTINYFV-TCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTD 698
G+ + I Y ++ K L TH EL EG + E +K Y+++V ++N
Sbjct: 702 GLSIAWSVIEYISKNNNLKCKTLFATHYHELTKLEGVI---EGVKNYSVAVSEIDDN--- 755
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQN 744
I+FL ++V G A SYG+ A LAG+P +VI RA +L + +N
Sbjct: 756 ---IIFLRKIVEGGADQSYGIEVAKLAGLPTQVIDRAKEILSSLEN 798
>gi|357061068|ref|ZP_09121829.1| DNA mismatch repair protein mutS [Alloprevotella rava F0323]
gi|355375293|gb|EHG22581.1| DNA mismatch repair protein mutS [Alloprevotella rava F0323]
Length = 872
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 275/585 (47%), Gaps = 73/585 (12%)
Query: 202 EGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLK 261
+G S+ ++++ +TPMG R L W L P+ ++++ R + + +F E + L
Sbjct: 284 DGKSLLDVVDRTLTPMGARSLHRWLLFPLRSVKDIQQRQDGVEYFFKEPEFRELCQDELC 343
Query: 262 YVKDIPHILKKFN----SP---SFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQL 314
+ D+ I+ K +P + A + L+ C ++ E+G+ ++L
Sbjct: 344 KIGDLERIVSKIAVGRVTPREMQQLRMALESVGLLREACIHASNKQMQEIGLKMDACKEL 403
Query: 315 --RLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
R+L+ D++ + + G ++ G C+ELDELR I
Sbjct: 404 HDRILH-DLLPDPPALLNK-----------------------GGVIAAGVCNELDELRSI 439
Query: 373 YEELPEFLEEVASLE--LVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQG 430
+L+ + E +P L I + + GY + + T +Q
Sbjct: 440 STSGKSYLQHIQERESEATGIPSLK-------IGFNNVFGYYIEV------RNTYKQQVP 486
Query: 431 FEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLK 490
E+ + +R Y T + +E + + +IL +E + +LVS F L +
Sbjct: 487 AEWIRKQTLVQAER--YITQELKEYEEKILGAEDRILSLETKLYNELVSTANQFIALLQR 544
Query: 491 AVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTR 547
A LDC SLA V+ N Y+RP++ LDI+ GRH + E + + ++PND
Sbjct: 545 NALQIATLDCLFSLAEVSRTNRYVRPVVDDSMQLDIRQGRHPVIETLMPPGEEYVPNDVS 604
Query: 548 IDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SK 598
+D+ + +I IITGPN +GKS ++Q ALI L+ IGSFVPA++A +G+ D S
Sbjct: 605 LDDKEQQIIIITGPNMAGKSALLRQTALIALLAQIGSFVPAESAHIGIVDKIFTRVGASD 664
Query: 599 HMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDV 657
+++ +S+FM+++ + ++ T +SL L DE G+GT T DGI + + Y
Sbjct: 665 NISMGESTFMVEMSEAANIMNNLTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHENPRG 724
Query: 658 PPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSY 717
+ L TH EL L R+K + +SV N +VFL +L+ G + S+
Sbjct: 725 NARTLFATHYHELNEMEKL--FSRIKNWNVSVKEVNNR------VVFLRKLMRGGSEHSF 776
Query: 718 GLHCALLAGVPAEVIKRAAYVLE--AAQNNKHVERWSHENISAQD 760
G+H A +AG+P ++KRA +L A N ++ ER E +++ D
Sbjct: 777 GIHVARIAGMPGNIVKRAEQILADLEANNARNGERPRMEQLASAD 821
>gi|433590034|ref|YP_007279530.1| DNA mismatch repair protein MutS [Natrinema pellirubrum DSM 15624]
gi|448333850|ref|ZP_21523038.1| DNA mismatch repair protein MutS [Natrinema pellirubrum DSM 15624]
gi|433304814|gb|AGB30626.1| DNA mismatch repair protein MutS [Natrinema pellirubrum DSM 15624]
gi|445621424|gb|ELY74899.1| DNA mismatch repair protein MutS [Natrinema pellirubrum DSM 15624]
Length = 889
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 207/769 (26%), Positives = 338/769 (43%), Gaps = 103/769 (13%)
Query: 4 YMACILHGHRVGVSYYD------SSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTS 57
YMA ++ G VG + D + + L V + ++ D L ++ ++ +
Sbjct: 118 YMAAVVDGSEVGGASSDGYGLAFADVTTGRFL-VADAADPDEALTELYRFDPVEVLPGPE 176
Query: 58 TKSEESFLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERIC 116
++++ L L+ R D T + L ++ F+ ++ H + T D LS+ E+
Sbjct: 177 VRTDDDLLGKLRERVDAT-----LTLHETDAFAPKRGAHTVREQFGTETVDRLSVGEQTL 231
Query: 117 YLNSMMDMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVS-LNKFLKL 175
A+G +L+ +E E+G + + I+ + + L
Sbjct: 232 A--------------AAGAVLSYVE-----------ETGAGVLASMTRIQAHHGDDHVTL 266
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T G G S+F ++ T G RLL+ W RP LE
Sbjct: 267 DATTQRNLELTET-----MQGDGDG----SLFATIDHTETSAGGRLLKEWLQRPRRSLET 317
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
L R ++ + + + L D+ + K + S A D A +++ L
Sbjct: 318 LEERQASVDALSTAALARDEIQDRLGEAYDLARLASKASHGS--ADARDLVAVRETLAVL 375
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
V + E + +L + D ++AA+ EL E + + G
Sbjct: 376 PAVAETIES--TPALADSPLSAIVDRPDRAAA---RELRETLEEAVA---EDPPSTVTQG 427
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLM 413
L+R+G+ DELDE+ + +EE+ E+L+ +A E Q L H+ + GY +
Sbjct: 428 ELLRKGYDDELDEVIERHEEVREWLDTLAEREKRQHGLSHV-------TVDRNKTDGYYI 480
Query: 414 CIFEEKLDDTT--LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNL-LGDIYHKILDME 470
+ + D EQ++ + +KR + +E D L L D ++
Sbjct: 481 QVGKSAADGVPDHYEQIKTLK--------NSKRFTTEELEEKERDVLRLEDRRGELEYEL 532
Query: 471 RAITRDLVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNG 529
RD V+ LL+ V A A +D SLA A +N ++RP L L I+ G
Sbjct: 533 FEELRDEVAERAA----LLQDVGRALATIDALASLATHAAENRWVRPELHRGDDLTIEQG 588
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E T + F+PND R+D D ++TGPN SGKS Y++QVA IV L+ IGSFVPA+A
Sbjct: 589 RHPVVEQTTE-FVPNDVRMDEDRGFLVVTGPNMSGKSTYMRQVACIVLLAQIGSFVPAEA 647
Query: 590 ATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A +G+ D + +S+FM+++ ++ +L AT +SL +LDE G+GT T DG
Sbjct: 648 AEIGVVDGIFTRVGALDELAQGRSTFMVEMSELSNILHTATEESLVILDEVGRGTATYDG 707
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVE 700
I + Y +V K L TH EL LP + + V E +
Sbjct: 708 ISIAWAATEYL-HNEVKAKTLFATHYHELTGLAENLP-----RVANVHVAADERDG---- 757
Query: 701 DIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
++ FL + G SYG+H A LAGVP V+ R+ VLE + K +E
Sbjct: 758 EVTFLRTVRDGPTDRSYGVHVADLAGVPDPVVDRSREVLERLREEKAIE 806
>gi|425459805|ref|ZP_18839291.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9808]
gi|389827656|emb|CCI20908.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9808]
Length = 882
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 198/769 (25%), Positives = 335/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLGEIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++R+G +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIRQGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ +E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNKLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATERSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+PA VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPASVIDRAMQVM--GQIEKH 847
>gi|418329388|ref|ZP_12940456.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
14.1.R1.SE]
gi|365230423|gb|EHM71518.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
14.1.R1.SE]
Length = 873
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 292/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ +++N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQHINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 731
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 732 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 786
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 787 PSYQLSHQDTDNQ 799
>gi|242242579|ref|ZP_04797024.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
W23144]
gi|242234006|gb|EES36318.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
W23144]
Length = 877
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 291/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 239 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 290
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 291 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 348
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 349 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 403
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 404 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 450
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 451 -KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDIIL 504
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 505 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 564
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 565 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 624
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 625 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 684
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 685 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 735
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 736 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 790
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 791 PSYQLSHQDTDNQ 803
>gi|425438091|ref|ZP_18818500.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9432]
gi|389676830|emb|CCH94224.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9432]
Length = 882
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 197/769 (25%), Positives = 336/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYADISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L+ + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLREIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++R+G +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIRQGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ ++E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNNLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+P VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPTSVIDRAMQVM--GQIEKH 847
>gi|448617252|ref|ZP_21665907.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
gi|445748601|gb|EMA00048.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
Length = 919
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 303/645 (46%), Gaps = 81/645 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
S+ ++RA G LLA E + LE + V +FL+LDATA ++L++
Sbjct: 242 SDAELRAVGALLAYAEYAQGDSKLEY---------VTRVTRFDPREFLQLDATAIQSLEL 292
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
F + + G ++F ++++ +GRR L W RP++D E + +RL+A+
Sbjct: 293 FDSRS---------TRAGSTLFSVLDETACALGRRRLEAWLRRPLVDREAIEARLDAVDA 343
Query: 246 FLCSEEL-MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
LC + L A L + L V D+ ++ + + A D L+S+ + L +++ E+
Sbjct: 344 -LCDDALSRADLRDHLSSVYDLERLVARVSRER--ANARD----LRSLKTTL--DRVPEI 394
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
RE L + ++ K + EL V +LV I + +E G ++ +GF
Sbjct: 395 ------RESLAETDSALLSKLRDSLD-ELECVRDLVGRAIVTDPPQEITEGGVIADGFNA 447
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELD+LR E+ E+ V++LE+ + + +H GY + + LD
Sbjct: 448 ELDDLRGTAEDGREW---VSNLEVQERERTGIDSLEVGYNQVH--GYYIEVTNPNLDRVP 502
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+ ++ S+ ++TP+ +E ++ + + +E + ++ + +
Sbjct: 503 DDYVRRQTLKNSER--------FYTPELKEREDEILRAADRADALEYDLFCEVRADVATE 554
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL----------TLEPLLD-----IQNG 529
S+ + + A+LD +LA VA N+Y RP T D I G
Sbjct: 555 SERIQAVADVLADLDVLRTLADVAVANDYARPEFHGGSAGGGENTSNAKFDGEGIEIDAG 614
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E F+PN I G + +ITGPN SGKS Y++QVAL+ L+ +GSFVPADA
Sbjct: 615 RHPVVERAQGEFVPNPASIPQGG-VALITGPNMSGKSTYMRQVALVCILAQMGSFVPADA 673
Query: 590 ATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A + + D S + QS+FM ++ ++ +L AT SL LLDE G+GT T DG
Sbjct: 674 ARLPVVDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATDDSLVLLDEVGRGTSTADG 733
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ + FV +V L TH +L + ++R + + + + +
Sbjct: 734 LAIARAATE-FVHDEVGAMTLFATHYHDLTDAA----ADRDGVFNLHFTATQRDG----E 784
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ FL+ + G + SYG+ A LAGVP+ V+ RA ++E +N+
Sbjct: 785 VTFLHSVADGPSSSSYGVEVAHLAGVPSTVVDRARNLVEEDVSNE 829
>gi|418974046|ref|ZP_13521981.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383346023|gb|EID24099.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 844
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 271/591 (45%), Gaps = 65/591 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLGHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPVLAYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------DGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPVHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSRIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAI 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y + + K L TH EL + E L + L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---QHLVNVHVA 736
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
L + + FL+++ PG A SYG+H A +AG+PA+++ RA +L
Sbjct: 737 TLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPADLLARADKIL 781
>gi|416124306|ref|ZP_11595302.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
FRI909]
gi|319401416|gb|EFV89626.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
FRI909]
Length = 873
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 291/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYDRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 731
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 732 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 786
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 787 PSYQLSHQDTDDQ 799
>gi|260060605|ref|YP_003193685.1| DNA mismatch repair protein MutS [Robiginitalea biformata HTCC2501]
gi|88784735|gb|EAR15904.1| DNA mismatch repair protein [Robiginitalea biformata HTCC2501]
Length = 871
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 164/601 (27%), Positives = 276/601 (45%), Gaps = 78/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I V ++ ++ +D + L++F+T R G S+ +++ +PMG R
Sbjct: 253 IGGVRRLASEDYVWMDRFTMQNLELFRT----------RDPGGVSLLDVVDHTRSPMGGR 302
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR W P+ DLE + R ++ E + + E L+ + D+ ++ K +
Sbjct: 303 LLRQWLALPLKDLEAIRKRHRIVAHLNSHPEELGPMREQLRQMGDLERLIAKAAAGKI-- 360
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL---AYVY 337
T + ++ +++ V + +LR D+ C A +
Sbjct: 361 TPRETVHLKNALQAVIPVKQRAAAAAEPALR--------DLAGSLDDCQALRERIGAVLL 412
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE-----LVQLP 392
E II G G V GF +ELDELR + ++LE++ E + L
Sbjct: 413 EEAPAII--------GKGRTVAPGFSEELDELRNLAGSGKDYLEQMLKREQERTGITSLK 464
Query: 393 HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKT 452
+F GY + + D E ++ ++ Y T +
Sbjct: 465 IASNNVF----------GYYIEVRNTHKDKVPPEWIRKQTLVSAER--------YITEEL 506
Query: 453 RELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+E + + +ILD+E+ + LV + + + + A LDC A +A Q+
Sbjct: 507 KEYEAKILGAEERILDLEQQLFAQLVVWMQEYIAPVQENARTLARLDCLCGFANLAGQHG 566
Query: 513 YMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDNDGR-INIITGPNYSGKSIY 568
Y+ P +T L I GRH + E + ++++PND +D + + I +ITGPN SGKS
Sbjct: 567 YVCPEMTDATDLRITQGRHPVIERQLPPGESYVPNDLHLDREQQQILMITGPNMSGKSAI 626
Query: 569 IKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQ 620
++Q ALIV L+ IGSFVPA+AA +G+TD S +++ +S+FM+++++ +L
Sbjct: 627 LRQTALIVLLAQIGSFVPAEAARLGVTDKIFTRVGASDNISLGESTFMVEMNEAASILNN 686
Query: 621 ATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSE 680
+ +SL LLDE G+GT T DGI + Y K L TH E LNE
Sbjct: 687 LSERSLILLDEIGRGTSTYDGISIAWAIAEYLHQHPARAKTLFATHYHE-LNE-MAGSFA 744
Query: 681 RLKFYTMSV--LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
R+K Y +SV LR + ++FL +L PG + S+G+H A +AG+P EV+++A +
Sbjct: 745 RIKNYNVSVKELR--------DKVLFLRKLEPGGSHHSFGIHVARMAGMPGEVVRKAQKI 796
Query: 739 L 739
L
Sbjct: 797 L 797
>gi|385799933|ref|YP_005836337.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
gi|309389297|gb|ADO77177.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
Length = 868
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 163/610 (26%), Positives = 286/610 (46%), Gaps = 63/610 (10%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
L ++ LD+ + L++ T + G S+ ++++ VT MG R ++ W +
Sbjct: 262 LEDYMVLDSASRRNLELTATIRDNQRSG--------SLLSIIDQTVTSMGGREIKKWINQ 313
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P++ + + R A+ + + +++ L L + D+ I+ K S A D A
Sbjct: 314 PLIQKKAIEQRHTALEEIIDNYQVLDKLRAELNEIYDLERIMSKITYQSA--NARDLVAL 371
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
S+ L V + + S+ + E FD++E I E A E I +
Sbjct: 372 KNSLAKLPAVENLMQNLKSDLIIEMQ--TKFDLLEDMHDLI--EKAIKSEPPTTITE--- 424
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
G ++ + LD+LR + +++ + L KE + +
Sbjct: 425 ------GGIIASDYNSSLDQLRDLVSSGKDWITK-----------LQKEEREKTGINTLK 467
Query: 409 IGY--LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKI 466
+G+ + + E + T + + +E + + E Y PK +E + + KI
Sbjct: 468 VGFNKVFGYYLEVTNSHTDKVPERYERKQTLSNSER----YIIPKLKEKEAEVLGAEEKI 523
Query: 467 LDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDI 526
D+E + ++ I + + + A+LD L+ + +A +NNY +P + P + I
Sbjct: 524 NDLEHKLFIEIREKIAQEVERINQTAAVIAQLDVLLAFSYLAIENNYTKPEVNNGPAIKI 583
Query: 527 QNGRH-VLQEMTVDTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
+NGRH V+++M + F+PND +D + R IITGPN SGKS Y++QVALIV ++ +GS+
Sbjct: 584 KNGRHPVVEKMFTEQFVPNDCYLDQTEQRFVIITGPNMSGKSTYMRQVALIVLMAQVGSY 643
Query: 585 VPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPA+ A +GLTD S +T QS+FM+++++V ++ +T +SL +LDE G+GT
Sbjct: 644 VPAEEALIGLTDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNNSTEKSLIILDEVGRGT 703
Query: 637 LTEDGIGLLGGTINYFVTCD-VPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPEN 694
T DG+ + Y + + + L TH EL E P +K Y + V +N
Sbjct: 704 STYDGVSIAWSVSEYLNNPERIGARTLFATHYHELTRLEDEYPG---IKNYNVLVEEDKN 760
Query: 695 NSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH--VERWS 752
+ FL+R++ G A SYG+ A LAG+P E+I A +L + N V +
Sbjct: 761 G------VHFLHRIIEGRADDSYGIEVARLAGLPEEIIISAQKILNRLEKNNQMPVRKLE 814
Query: 753 HENISAQDQQ 762
+Q QQ
Sbjct: 815 KTVTDSQHQQ 824
>gi|167753644|ref|ZP_02425771.1| hypothetical protein ALIPUT_01924 [Alistipes putredinis DSM 17216]
gi|167658269|gb|EDS02399.1| DNA mismatch repair protein MutS [Alistipes putredinis DSM 17216]
Length = 888
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 160/599 (26%), Positives = 285/599 (47%), Gaps = 70/599 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++ +D L++F ++ ++E + ++++ +TPMG R
Sbjct: 255 ISSISRIDQEDYVWVDKFTIRNLELFSSNG---------SREKCAFADVVDRTLTPMGGR 305
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W PI +++ +N RL+ + F +L S+ E + V D+ I + +
Sbjct: 306 LLKRWIALPIKEIDRINERLDVVQRFYDEPDLAESVAEQISQVGDLERIASRIAAARV-- 363
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISE---SLREQLRLLNFDIVEKAASCITTELAYVY 337
T + S+ ++ + + E E +L EQ+ LL ++ E+ A + +
Sbjct: 364 TPREIVQLKNSLSAIELLKALLESTDDERLHALAEQIDLLA-EVRERIAREVYPD----- 417
Query: 338 ELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKE 397
++ + G ++ +G ELD+LR+I +FL + E +
Sbjct: 418 ---------PQNNQIQRGGIIADGVDAELDDLRRIALHGKDFLNRIQQRE-------SEA 461
Query: 398 MFVPC-IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
+P I Y + GY + + D ++ A ++ Y T + +E +
Sbjct: 462 TGIPLKISYNNVFGYYIEVRNTHKDKVPESWIRKQTLANAER--------YITEELKEYE 513
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
+ K+L +E+ I +L+ I L + A +DC S A +A + NY+RP
Sbjct: 514 EKILGAEEKMLLIEQRIYAELIGFITHSLGALQRDAAVVARIDCLQSFARIARERNYVRP 573
Query: 517 ILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYIKQV 572
L ++I+ GRH + E + + +IPND +D+ + +I +ITGPN SGKS ++Q
Sbjct: 574 TLDDGTRIEIRQGRHPVIETLMPVGEEYIPNDLLLDDKEQQIVMITGPNMSGKSALLRQT 633
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
ALI+ ++ +GSFVPA AA +G+ D S +++ +S+FM+++ + +L + +
Sbjct: 634 ALIILMAQMGSFVPAKAAHIGVVDKIFTRVGASDNISQGESTFMVEMLESASILNNVSDR 693
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVCTHLTEL--LNEGCLPKSER 681
S+ LLDE G+GT T DGI + + Y K L TH EL + + C R
Sbjct: 694 SIVLLDEIGRGTSTYDGISIAWAMVEYLHNHPTARAKTLFATHYHELNEMEQMC----PR 749
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
+K Y +SV E + T IVFL +L G S+G+H A +AG+PA V+ RA +L+
Sbjct: 750 VKNYHVSV--KEVDKT----IVFLRKLERGGTEHSFGIHVARMAGMPASVVARAEEILK 802
>gi|418615557|ref|ZP_13178499.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU118]
gi|374816996|gb|EHR81187.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU118]
Length = 873
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 291/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 731
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 732 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 786
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 787 PSYQLSHQDTDNQ 799
>gi|357632984|ref|ZP_09130862.1| DNA mismatch repair protein MutS [Desulfovibrio sp. FW1012B]
gi|357581538|gb|EHJ46871.1| DNA mismatch repair protein MutS [Desulfovibrio sp. FW1012B]
Length = 880
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 298/655 (45%), Gaps = 96/655 (14%)
Query: 120 SMMDMGSEVQ-VRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDAT 178
+ +D+G + Q VRA G LL L + +E G+ S V+L + + LD
Sbjct: 218 AALDLGDKPQLVRAMGALLTYLA------ATQMRELGHLS----PFRPVNLGRTMLLDEV 267
Query: 179 AHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNS 238
+ L+IF+ + G+G +++ +++K +TPMG RLL + +P LDL +
Sbjct: 268 TEKNLEIFR--RLDGGKGVG------TLWHVLDKTMTPMGGRLLESRLRQPWLDLGPILE 319
Query: 239 RLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLL 296
A++ E L E L V D L++ + F+ A+ D+TA +S+ +L
Sbjct: 320 TQAAVASLAADEGRRTGLREALAGVYD----LERLTTRIFLNRAAPRDFTALRQSLGALP 375
Query: 297 HVNKIFEVGISESLREQLRLL-NFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ ++ ++ + + LL +FD +E A + ++ L L + G
Sbjct: 376 RLRELASAD-DQAPKAFVELLADFDALEDAFALLSRALVDSPPLAVT-----------EG 423
Query: 356 TLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCI 415
L R G Y + L E+ ++ L +E C + ++GY
Sbjct: 424 GLFRPG-----------YHPELDELLELTEHGEARIEALLQEEREACNLPRLKLGY---- 468
Query: 416 FEEKLDDTTLEQLQGFEFAFSDMDGETKRLF-----------YHTPKTRELDNLLGDIYH 464
++ G+ F S G F Y TP ++L+ L
Sbjct: 469 ----------NRVFGYYFELSKSAGSPPGHFERRQTLANCERYVTPALKDLEERLLSAAD 518
Query: 465 KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLL 524
K +E + DL + + D ++ A LD + LA A + RP L + +
Sbjct: 519 KRKTLEYNLFLDLRTQVAGLRDRIMGTAARVARLDVWQGLAEAAVIGEWTRPELRQDLGI 578
Query: 525 DIQNGRHVLQEMT--VDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIG 582
I+ GRH + E + +IPND +D+ R+ +ITGPN +GKS ++Q ALI L+ IG
Sbjct: 579 TIRAGRHPVIEAAQGIGNYIPNDISVDDAARLLLITGPNMAGKSTVLRQTALIAILAQIG 638
Query: 583 SFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGK 634
SFVPA A +GL D S ++ QS+FM+++ + +LRQA +SL +LDE G+
Sbjct: 639 SFVPATQAVIGLVDRVFCRVGASDNLARGQSTFMVEMMETARILRQAGKRSLVILDEIGR 698
Query: 635 GTLTEDGIGLLGGTINYFVTCDVPPKV--LVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
GT T DG+ L + + V L TH EL EG LP L+ + ++V
Sbjct: 699 GTATFDGLALAWAVVEDLAGREGGQGVRTLFATHYHELTALEGRLPG---LRNFNIAVKE 755
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ DI+FL RL+PG A SYG+ A LAGVP V+KRA +LE + ++
Sbjct: 756 WKG------DIIFLRRLLPGPADRSYGVEVARLAGVPRNVVKRARELLETLERSR 804
>gi|167750508|ref|ZP_02422635.1| hypothetical protein EUBSIR_01484 [Eubacterium siraeum DSM 15702]
gi|167656434|gb|EDS00564.1| DNA mismatch repair protein MutS [Eubacterium siraeum DSM 15702]
Length = 870
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 282/592 (47%), Gaps = 73/592 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S +F++L L++ T + G S+ +++K T MGRR LR
Sbjct: 269 SSGEFMQLGLATRRNLELTSTMRSGEKKG--------SLLWVLDKTDTSMGRRKLRQCIE 320
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW-- 285
+P+ D + R +A+ + + + + L V D+ ++ + IY A++
Sbjct: 321 QPLTDTAAIIRRHDAVEALINNSAALYDIKTDLAKVYDLERLMTRI-----IYKAANAKD 375
Query: 286 TAFLKSICSLLHVNKI----FEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYEL 339
L + C +L K ++ SL +++ L+ D+VE+A + L
Sbjct: 376 VKALGATCRILPQLKSDLSQISTQLTRSLDKKISPLDDIADLVERAIADEPPALM----- 430
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
K+ GY ++ GF +ELD LR I + L ++ E + K +
Sbjct: 431 ----------KDGGY---IKNGFNEELDRLRNITGGGKDLLAQIEQQE--KEATGIKNLR 475
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
V Y GY + + + + ++ +GE Y T + ++++N +
Sbjct: 476 VG---YNRVFGYYIEVSKGNVSMVPDRYVRKQTLT----NGER----YITDELKKIENEI 524
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
KIL +E AI ++ I D + + A LD S A+V+ +NNY RP++
Sbjct: 525 LGANDKILALEAAIFAEVREFIARRLDLIQQTAESVAALDVLCSYAVVSIENNYCRPMMA 584
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++I++GRH + E V+ F PND +D R+ IITGPN SGKS +++QVA+IV
Sbjct: 585 NDSVIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNRLMIITGPNMSGKSTFMRQVAVIV 644
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IG FVPA A +G+ D S ++A QS+FM+++ +V +L +AT SL +
Sbjct: 645 LMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVEMTEVATILNEATKNSLVI 704
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
LDE G+GT T DG+ + Y + + K L TH EL++ E L + ++ Y++
Sbjct: 705 LDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFATHYHELISLENEL---DGVRNYSV 761
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
V R EDI FL+++V G SYG+ A LAG+P +V RA +L
Sbjct: 762 KVKRSG------EDIKFLHKIVEGGTDDSYGIEVARLAGLPKKVTDRAKQLL 807
>gi|418630382|ref|ZP_13192864.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU128]
gi|420174935|ref|ZP_14681381.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM061]
gi|420191656|ref|ZP_14697567.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM023]
gi|374837923|gb|EHS01481.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU128]
gi|394244468|gb|EJD89810.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM061]
gi|394265807|gb|EJE10454.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM023]
Length = 873
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 291/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYNRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 731
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 732 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 786
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 787 PSYQLSHQDTDNQ 799
>gi|448466848|ref|ZP_21599270.1| DNA mismatch repair protein MutS [Halorubrum kocurii JCM 14978]
gi|445813274|gb|EMA63254.1| DNA mismatch repair protein MutS [Halorubrum kocurii JCM 14978]
Length = 942
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 296/643 (46%), Gaps = 83/643 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHEALQ 184
SE +RA+G +L +E E+G + ++ + + + +DAT L+
Sbjct: 234 SEPALRAAGAVLGYVE-----------ETGAGVLASMTRLTAYDDGEHVAVDATTQRNLE 282
Query: 185 IFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAIS 244
+ +T R S+F ++ VT G RLLR W RP D E L+ RL+AI+
Sbjct: 283 LTET---------MRGDADGSLFETVDHTVTAAGGRLLREWLTRPRRDREELDRRLDAIA 333
Query: 245 FFLCSEELMASLHETLKYVKDIPHILKKFNSPSF----IYTASDWTAFLKSICSLLHVNK 300
+ L ETL D+ + + S S + + D A + ++ +
Sbjct: 334 ALASAALARDRLRETLGDAYDLERLAARATSGSAGARELLSVRDSLALVPALADAVSGTA 393
Query: 301 IFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVRE 360
+ + I+ L D +++ + A EL + D + K K G L+RE
Sbjct: 394 LADSPIAAIL---------DRIDRDRAA-----ALHAELADALAD-DPPKTKTQGGLLRE 438
Query: 361 GFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIHQIGYLMC--IF 416
G+ +ELDEL +EE E+L+ +A E Q L H+ + YI Q+G + +
Sbjct: 439 GYDEELDELIASHEEAAEWLDTLAEREKRQYGLSHVTVDRNKTDGYYI-QVGKSVADQVP 497
Query: 417 EEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRD 476
E + TL+ + F +D E +R + R G++ +++ + R D
Sbjct: 498 EHYREIKTLKNSKRF---VTDELEEREREVLRLEEAR------GELEYELFEALRERVAD 548
Query: 477 LVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQE 535
LL+ V A AE D SLA A N++ RP L E LD++ GRH + E
Sbjct: 549 DA--------ELLQDVGRAVAETDALASLATHAAGNDWTRPELADERRLDVEAGRHPVVE 600
Query: 536 MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLT 595
T D F+PND R+D + I+TGPN SGKS Y++Q ALI L+ GSFVPA AATVGL
Sbjct: 601 RTTD-FVPNDLRLDAERGFLIVTGPNMSGKSTYMRQAALIQLLAQAGSFVPARAATVGLV 659
Query: 596 DS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGG 647
D + +S+FM+++ ++ +L AT+ SL +LDE G+GT T DGI +
Sbjct: 660 DGIYTRVGALDELAQGRSTFMVEMQELSNILHSATADSLVILDEVGRGTATYDGISIAWA 719
Query: 648 TINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLY 706
Y +V + L TH EL LP+ E + + D E + FL
Sbjct: 720 ATEYL-HNEVRARTLFATHYHELTTLADHLPRVENVHVAV--------DERDGE-VTFLR 769
Query: 707 RLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
+ G SYG+H A LAGVP V+ RA VL+ + K +E
Sbjct: 770 TVREGPTNRSYGVHVADLAGVPEPVVSRADAVLDRLREEKAIE 812
>gi|389847474|ref|YP_006349713.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
gi|388244780|gb|AFK19726.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
Length = 954
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 176/645 (27%), Positives = 303/645 (46%), Gaps = 81/645 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
S+ ++RA G LLA E + LE + V +FL+LDATA ++L++
Sbjct: 277 SDAELRAVGALLAYAEYAQGDSKLEY---------VTRVTRFDPREFLQLDATAIQSLEL 327
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
F + + G ++F ++++ +GRR L W RP++D E + +RL+A+
Sbjct: 328 FDSRS---------TRAGSTLFSVLDETACALGRRRLEAWLRRPLVDREAIEARLDAVDA 378
Query: 246 FLCSEEL-MASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
LC + L A L + L V D+ ++ + + A D L+S+ + L +++ E+
Sbjct: 379 -LCDDALSRADLRDHLSSVYDLERLVARVSRER--ANARD----LRSLKTTL--DRVPEI 429
Query: 305 GISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCD 364
RE L + ++ K + EL V +LV I + +E G ++ +GF
Sbjct: 430 ------RESLAETDSALLSKLRDSLD-ELECVRDLVGRAIVTDPPQEITEGGVIADGFNA 482
Query: 365 ELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTT 424
ELD+LR E+ E+ V++LE+ + + +H GY + + LD
Sbjct: 483 ELDDLRGTAEDGREW---VSNLEVQERERTGIDSLEVGYNQVH--GYYIEVTNPNLDRVP 537
Query: 425 LEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLF 484
+ ++ S+ ++TP+ +E ++ + + +E + ++ + +
Sbjct: 538 DDYVRRQTLKNSER--------FYTPELKEREDEILRAADRADALEYDLFCEVRADVATE 589
Query: 485 SDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL----------TLEPLLD-----IQNG 529
S+ + + A+LD +LA VA N+Y RP T D I G
Sbjct: 590 SERIQAVADVLADLDVLRTLADVAVANDYARPEFHGGSAGGGENTSNAKFDGEGIEIDAG 649
Query: 530 RHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADA 589
RH + E F+PN I G + +ITGPN SGKS Y++QVAL+ L+ +GSFVPADA
Sbjct: 650 RHPVVERAQGEFVPNPASIPQGG-VALITGPNMSGKSTYMRQVALVCILAQMGSFVPADA 708
Query: 590 ATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDG 641
A + + D S + QS+FM ++ ++ +L AT SL LLDE G+GT T DG
Sbjct: 709 ARLPVVDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATDDSLVLLDEVGRGTSTADG 768
Query: 642 IGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED 701
+ + FV +V L TH +L + ++R + + + + +
Sbjct: 769 LAIARAATE-FVHDEVGAMTLFATHYHDLTD----AAADRDGVFNLHFTATQRDG----E 819
Query: 702 IVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ FL+ + G + SYG+ A LAGVP+ V+ RA ++E +N+
Sbjct: 820 VTFLHSVADGPSSSSYGVEVAHLAGVPSTVVDRARNLVEEDVSNE 864
>gi|302342734|ref|YP_003807263.1| DNA mismatch repair protein MutS [Desulfarculus baarsii DSM 2075]
gi|301639347|gb|ADK84669.1| DNA mismatch repair protein MutS [Desulfarculus baarsii DSM 2075]
Length = 858
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 284/583 (48%), Gaps = 68/583 (11%)
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LDATA L++++ S G GR S+ +++ ++PMG RLL+ W P+L+LE
Sbjct: 264 LDATARRNLELYK-----SIAGGGRKG---SLLQAVDRTLSPMGGRLLKQWLGFPLLELE 315
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ +R A+ L + L+ + D+P ++ + AS A + +
Sbjct: 316 RVEARHQAVDELTRDLAARDGLRQALEAMPDVPRLVGR---------ASLGQAGPRELAG 366
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGY 354
L + +R +L ++ +AA + EL + + + S+ G
Sbjct: 367 LRQALRAL-----PEVRRRLAGFAAPLLRRAAESLEGLEPLAVELERALAE-SPSQALGD 420
Query: 355 GTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMC 414
G ++ EGF ELD+LRQ+ + ++ +A+L+ L E + + +IG+
Sbjct: 421 GGVIAEGFDQELDQLRQLGGQGKDW---IAALQA----SLRAETGIGSL----KIGF-NR 468
Query: 415 IFEEKLDDTTLEQLQGFE-FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+F ++ TT Q + E F +R Y TP+ +E + + K L++ER +
Sbjct: 469 VFGYYIEVTTAHQAKVPEHFIRKQTLATAER--YFTPELKEKEAAVLGAEEKALELERRL 526
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
+L + + +S L+ A +D + A +A +Y RP+++ L I+ GRH
Sbjct: 527 FDELRALVAAWSGRLMDCGRALAMVDVLAAWADLAVSQDYARPLMSQNGALCIEQGRHPV 586
Query: 532 VLQEMTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAA 590
V Q + F+PND +D+ ++ IITGPN +GKS ++QVALI L+ GSFVPA A
Sbjct: 587 VEQMLAAGEFVPNDVLLDDGAQQVIIITGPNMAGKSTILRQVALICLLAQAGSFVPAARA 646
Query: 591 TVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGI 642
+ L D + +S+FM+++ + +L+ AT +SL +LDE G+GT T DG+
Sbjct: 647 ELPLVDRVFTRVGAMDDLARGRSTFMVEMTETAQILKNATPRSLVVLDEVGRGTSTFDGL 706
Query: 643 GL---LGGTINYFVTCDVPPKVLVCTH---LTELLNEGCLPKSERLKFYTMSVLRPENNS 696
L + ++ V K L TH LTEL + K R++ Y ++V E+
Sbjct: 707 SLAWAVAEALHDLQGRGV--KTLFATHYHELTELAD-----KLPRVRNYNVAVR--EHRG 757
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++VFL RL PG SYGL A LAG+P +V++RA VL
Sbjct: 758 ----EVVFLRRLAPGGVSRSYGLQVARLAGLPEDVLRRAREVL 796
>gi|313124269|ref|YP_004034528.1| DNA mismatch repair protein muts [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422844178|ref|ZP_16890888.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|312280832|gb|ADQ61551.1| DNA mismatch repair protein mutS [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685683|gb|EGD27762.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 856
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 278/584 (47%), Gaps = 58/584 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ ++L++ T L++ Q+ GR K+G S+F +++K T MG RLL+ W R
Sbjct: 250 IGQYLQMANTVQRNLELTQS------ATTGR-KQG-SLFWVLDKTTTAMGGRLLKQWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L L+ + R + L ++ ++LK V D+ + S + +
Sbjct: 302 PLLSLDRIKQRQQMVQALLDDYFTRENIVDSLKGVYDLERL-----SGRVAFGNVNPREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL I + ++ES L EK I + + ++D
Sbjct: 357 LQLAKSLEATKPIIQA-LAESGNPDL--------EKYGQGIDPQSELAESITNCLVDQPP 407
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
K G ++R G ++LD+ R+ ++L A +E+ + + I Y
Sbjct: 408 ISAKD-GGIIRAGVSEDLDKYREAMNGGKKWL---AQMEMEERQRTGIDNL--KIGYNRV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + + + ++ ++ T Y TP+ +E +NL+ + + D
Sbjct: 462 FGYFIQVSKGNVAKVPQDR-------YTRKQTLTNAERYITPELKEHENLILEAESRSTD 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E + L + L + A LD F++ A A + NY RP + + + ++N
Sbjct: 515 LEYELFSQLREAVKAHIPALQELGRQLAALDVFVAFAQDAEEKNYCRPSFSSKNEIAVKN 574
Query: 529 GRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH + E + ++IPND +D D I +ITGPN SGKS Y++Q+ALI ++ IGSFVP
Sbjct: 575 GRHPVVEAVLPAGSYIPNDLVMDEDTSIYLITGPNMSGKSTYMRQLALIAIMAQIGSFVP 634
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
AD+A + + D + + + +S+FM+++ + L+ A+S+SL L DE G+GT T
Sbjct: 635 ADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDEIGRGTAT 694
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENNS 696
DG+ L G I Y V K L TH EL L+E LP + V E N
Sbjct: 695 YDGMALAGAIIKYL-HDKVGAKTLFATHYHELTELDE-TLP-----HLKNIHVGATEENG 747
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P V++ A+ +L+
Sbjct: 748 ----QLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLK 787
>gi|383938101|ref|ZP_09991324.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
gi|383714987|gb|EID70970.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
Length = 844
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 162/597 (27%), Positives = 272/597 (45%), Gaps = 65/597 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPMIDKERIIQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------DGGIIRTGFDETLDKYRRVLREGTGWIAEIEAKE-----RGNSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAIVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A++
Sbjct: 561 DDSRIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAMMAI 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQMGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y + + K L TH EL + E L E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVNVHVA 736
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
L + + FL+++ PG A SYG+H A +AG+PA+++ RA +L +N
Sbjct: 737 TLEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLENQ 787
>gi|163782411|ref|ZP_02177409.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882444|gb|EDP75950.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 852
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 285/594 (47%), Gaps = 78/594 (13%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
F+++D A L++ ++ + ++ +S+FG++++ +T MGRR LR L P
Sbjct: 257 FVRIDLKARRGLELLESIE---------GRKDYSLFGVLDRTLTGMGRRRLRFHILNPFR 307
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D+E + +A+ E+ L E L + D+ ++ K +S + S
Sbjct: 308 DVERIREVQDAVEELFRKEDKRRKLREILSDMADLERLVSKVSSN------------MAS 355
Query: 292 ICSLLHV-NKIFEVGISESLREQLRLLNFDIVEKAASCITT--ELA------YVYELVIG 342
+LH+ N +F+V E LRE+LR ++ + + + ELA V E +
Sbjct: 356 PRDVLHLKNTLFKV---EELREELRDMDSSLFRDIYGSLESLRELAEEIDRVLVEEPPVH 412
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
+ D G L+REG + LDELR + + + L + L +E +
Sbjct: 413 LKD---------GGLIREGVDEYLDELRFVRDNARKLLRDYER-------RLKEETGISS 456
Query: 403 IVYIHQIGY--LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
+ ++GY +M + E T L+ F + + T + L+ +
Sbjct: 457 L----KVGYNKVMGYYVE----VTKPNLKYVPEYFRRRQTLSNAERFITDELSRLEERIL 508
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
+I ++E + L I + + + E+D SLA VAHQ ++RP +
Sbjct: 509 SAQSRINEIEYELFVQLRDRINTELERIGRNAQLVGEVDYVQSLAEVAHQRGWVRPEVND 568
Query: 521 EPLLDIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSH 580
+ I+ GRH + + ++PNDT ++ D + +ITGPN +GKS YI+QVAL+V LSH
Sbjct: 569 SFDIRIEEGRHPVIDAFTRRYVPNDTLMNEDEFLLVITGPNMAGKSSYIRQVALLVLLSH 628
Query: 581 IGSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEF 632
+GSF+PA A++G D+ + S+FM ++ V ML AT +SL +LDE
Sbjct: 629 MGSFIPAKKASIGNVDAIFTRIGSGDILAMGVSTFMNEMLDVAGMLSNATKKSLIVLDEI 688
Query: 633 GKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMSVLR 691
G+GT T DGI + + + ++ ++ + LV TH EL EG K +K Y M+V
Sbjct: 689 GRGTSTYDGIAISKAIVEH-ISRELGSRTLVATHFLELTELEG---KVRGVKNYHMAVSE 744
Query: 692 PENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
E+ +VFLY L+ G A S+G+ A +AG+P +I+RA +L + ++
Sbjct: 745 EESG------VVFLYTLLEGKAEGSFGIEVAKMAGLPDSLIERAREILMSLEDK 792
>gi|420176862|ref|ZP_14683256.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM057]
gi|420179456|ref|ZP_14685747.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM053]
gi|394251769|gb|EJD96845.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM057]
gi|394253660|gb|EJD98656.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM053]
Length = 873
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 291/613 (47%), Gaps = 62/613 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I+ VIE + ++K+D A L++ ++ + S G ++ +M++ TPMG R
Sbjct: 235 IEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKG--------TLLWLMDETKTPMGAR 286
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
L+ W RP+++ + +N RLN + F+ +L L V DI ++ + + +
Sbjct: 287 RLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNV-- 344
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELV 340
A D SI + H+ + +++ + L D + + E + V E
Sbjct: 345 NARDLIQLKHSISEIPHIKALLNELDAQTTTQFKELEPLDDLLQ-----ILEESLVEEPP 399
Query: 341 IGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFV 400
I I D G L ++GF +LDE + + +L E+ + E + K +
Sbjct: 400 ISIKD---------GGLFKKGFNTQLDEYLEASKNGKTWLAELQAKERERTG--IKSL-- 446
Query: 401 PCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLG 460
I + GY + I L++ Q + F + +R T + +E ++++
Sbjct: 447 -KISFNKVFGYFIEITRANLNNF---QPEAFGYDRKQTLSNAERFI--TDELKEKEDIIL 500
Query: 461 DIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTL 520
K +++E + L HI +++ L K +ELDC S A +A + NY++P +
Sbjct: 501 GAEDKAVELEYELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSD 560
Query: 521 EPLLDIQNGRHVLQEMTVD--TFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFL 578
+ +L ++N RH + E +D ++PND +D++ I +ITGPN SGKS Y++QVA+I +
Sbjct: 561 DKVLHLENSRHPVVERVMDHNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIM 620
Query: 579 SHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLD 630
+ +G++VP D+AT+ + D + + + +S+FM+++ + L AT SL + D
Sbjct: 621 AQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFD 680
Query: 631 EFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNE--GCLPKSERLKFYT 686
E G+GT T DG+ L I Y V K L TH EL L++ CL
Sbjct: 681 EIGRGTSTYDGLALAQAMIEY-VAQTSHAKTLFSTHYHELTSLDQMLNCLK--------N 731
Query: 687 MSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNK 746
+ V E +++FL+++ G SYG+ A LA +P EVI RA +L A + K
Sbjct: 732 VHVAANEYQG----ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQVILNAFE-QK 786
Query: 747 HVERWSHENISAQ 759
+ SH++ Q
Sbjct: 787 PSYQLSHQDTDDQ 799
>gi|334366029|ref|ZP_08514973.1| DNA mismatch repair protein MutS [Alistipes sp. HGB5]
gi|313157731|gb|EFR57142.1| DNA mismatch repair protein MutS [Alistipes sp. HGB5]
Length = 902
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 168/601 (27%), Positives = 284/601 (47%), Gaps = 75/601 (12%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I S+ + ++ +D L++F ++ A+E S ++++ +TPMG R
Sbjct: 269 ITSISRIDQEDYVWVDKFTIRNLELFSSNG---------AREKCSFADVIDRTLTPMGGR 319
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LL+ W PI D + RL+ + F+ +L + E + V D+ I S I
Sbjct: 320 LLKRWIAMPIKDPVKIGERLDVVEKFVRDADLADVVREQVALVGDMERI------ASRIA 373
Query: 281 TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLL--NFDIVEKAASCITTELAYVYE 338
A L + + L ++ + + + QL L D++E I E+ Y
Sbjct: 374 AARVTPRELVQLKNSLFAVELLKAALESTDDAQLHALAGQIDLLEGVRDRIAREI-YPDP 432
Query: 339 LVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLE--LVQLPHLCK 396
L N +KG ++ +G ELD+LR+I ++L + E +P L
Sbjct: 433 L-------NNQIQKG--GVIADGVDPELDDLRRIALHGKDYLARIQQRESEATGIPSLK- 482
Query: 397 EMFVPCIVYIHQIGYLMCI---FEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTR 453
I Y + GY + + +EK+ +T + + Q A Y T + +
Sbjct: 483 ------ISYNNVFGYYIEVRNAHKEKVPETWIRK-QTLANAER----------YITEELK 525
Query: 454 ELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNY 513
E + + K+L +E+ I D+++HI LL+ A +DC S A +A + Y
Sbjct: 526 EYEEKILGAEEKMLVIEQRIYADIIAHISRSLSSLLRDAAVVARIDCLQSFARLACERRY 585
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRIDN-DGRINIITGPNYSGKSIYI 569
+RP+L L+DI+ GRH + E + + ++PND +D+ + +I +ITGPN SGKS +
Sbjct: 586 VRPVLDDGKLIDIRQGRHPVIETLLPVGEEYVPNDVMLDDKEQQIMMITGPNMSGKSALL 645
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q ALI+ ++ +GSFVPA +A +G+ D S +++ +S+FM+++ + +L
Sbjct: 646 RQTALIILMAQMGSFVPAKSAHIGVVDKIFTRVGASDNISQGESTFMVEMLESASILNNI 705
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVT-CDVPPKVLVCTHLTEL--LNEGCLPK 678
+ +S+ LLDE G+GT T DGI + + Y K L TH EL + + C
Sbjct: 706 SDRSIVLLDEIGRGTSTYDGISIAWAMVEYLHNHPSAHAKTLFATHYHELNEMEQMC--- 762
Query: 679 SERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYV 738
R+K Y +SV N IVFL +L G S+G+H A +AG+P V+ RA +
Sbjct: 763 -PRVKNYHVSVKEMGNQ------IVFLRKLERGGTEHSFGIHVARMAGMPVSVVSRADEI 815
Query: 739 L 739
L
Sbjct: 816 L 816
>gi|293364382|ref|ZP_06611108.1| DNA mismatch repair protein HexA [Streptococcus oralis ATCC 35037]
gi|307702653|ref|ZP_07639605.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
gi|291317228|gb|EFE57655.1| DNA mismatch repair protein HexA [Streptococcus oralis ATCC 35037]
gi|307623769|gb|EFO02754.1| DNA mismatch repair protein MutS [Streptococcus oralis ATCC 35037]
Length = 844
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 270/600 (45%), Gaps = 65/600 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ VI + FL++D +L + + + G S+F ++++ T MG R
Sbjct: 238 LKPVIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMR 289
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR+W RP++D E + R + FL + L ++LK V DI + + SF
Sbjct: 290 LLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGK 346
Query: 281 T-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
T D ++ S+ + I E G+ + L + D + + S I+ +A
Sbjct: 347 TNPKDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPH 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 405 VIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGIS 448
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y + GY + +L + + S+ G T EL +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIE 497
Query: 460 GDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
GD+ K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 498 GDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRP 557
Query: 517 ILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVAL 574
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 558 EFGEDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAI 617
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL
Sbjct: 618 TAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSL 677
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 678 ILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSLEHLVNVHVA 736
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T+ E N + FL+++ PG A SYG+H A +AG+P E++ RA +L +N
Sbjct: 737 TL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPEELLARADKILTQLENQ 787
>gi|225174620|ref|ZP_03728618.1| DNA mismatch repair protein MutS [Dethiobacter alkaliphilus AHT 1]
gi|225169747|gb|EEG78543.1| DNA mismatch repair protein MutS [Dethiobacter alkaliphilus AHT 1]
Length = 867
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 278/591 (47%), Gaps = 59/591 (9%)
Query: 172 FLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPIL 231
++ LDA L++ +T + G S+ +++K + +G RLL+ W +P+L
Sbjct: 266 YMVLDAATRRNLELTRTIREERKYG--------SLLWVLDKTRSALGGRLLKRWLEQPLL 317
Query: 232 DLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKS 291
D + RL+A+ ++ L E L V D+ +L K + S A D A +
Sbjct: 318 DKAAICERLDAVEELAGDFLMLDELSELLDEVYDLERLLSKVHYES--ANARDLVALRST 375
Query: 292 ICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKE 351
+ L V + +S R Q + ++E + +T A + + + D
Sbjct: 376 LAVLPAVREKL---LSGGERMQTLARHLPVLEDLSLYLTE--ALCDDPPLSVRD------ 424
Query: 352 KGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGY 411
G LVR+ F ++D+LR +++ L + Q + + Y GY
Sbjct: 425 ---GGLVRDRFHPDVDKLRHACRHGRDYI-----LSMEQRERERTGIKSLKVGYNKVFGY 476
Query: 412 LMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMER 471
+ I T + ++ A ++ Y TP+ +E + + KI +E
Sbjct: 477 YIEITRANAHLTPDDYIRKQTLANAER--------YITPELKEYEATVLGAEEKICALEY 528
Query: 472 AITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH 531
+ +++ + + + +A A+LD F SLA VA Y+RP + ++DI+ GRH
Sbjct: 529 ELFQEVRRKVGANTMEIQEAAAALAQLDVFQSLARVARDYRYVRPQVDDGDVVDIREGRH 588
Query: 532 VLQE--MTVDTFIPNDTRIDNDG-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPAD 588
+ E M F+PNDTR+D D R+ +ITGPN +GKS Y++Q ALIV L+ +GSFVPA
Sbjct: 589 PVVERVMQDSMFVPNDTRLDRDNQRLLMITGPNMAGKSTYMRQTALIVLLAQVGSFVPAA 648
Query: 589 AATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTED 640
+A +GL D + + QS+FM+++ +V +L +AT +SL LLDE G+GT T D
Sbjct: 649 SANIGLVDRIFTRIGAADDLVGGQSTFMVEMSEVANILSRATDKSLVLLDEVGRGTSTFD 708
Query: 641 GIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGC-LPKSERLKFYTMSVLRPENNSTDV 699
GI + + + V + L TH EL + LP + M+ E
Sbjct: 709 GISIARAVVEHLY-GKVGARTLFATHYHELTDLASDLPAVQ-----NMATAVKEKG---- 758
Query: 700 EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVER 750
EDIVFL++++ G SYG+ A LAG+P VI R+ +L + ++ R
Sbjct: 759 EDIVFLHKVIAGSVDHSYGIQVARLAGLPQRVISRSREILNSLESPTQAVR 809
>gi|291557073|emb|CBL34190.1| DNA mismatch repair protein MutS [Eubacterium siraeum V10Sc8a]
Length = 870
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 282/592 (47%), Gaps = 73/592 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S +F++L L++ T + G S+ +++K T MGRR LR
Sbjct: 269 SSGEFMQLGLATRRNLELTSTMRSGEKKG--------SLLWVLDKTDTSMGRRKLRQCIE 320
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW-- 285
+P+ D + R +A+ + + + + L V D+ ++ + IY A++
Sbjct: 321 QPLTDTAAIIRRHDAVEALINNSAALYDIKTDLAKVYDLERLMTRI-----IYKAANAKD 375
Query: 286 TAFLKSICSLLHVNKI----FEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYEL 339
L + C +L K ++ SL +++ L+ D+VE+A + L
Sbjct: 376 VKALGATCRILPQLKSDLSQISTQLTRSLDKKISPLDDIADLVERAIADEPPALM----- 430
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
K+ GY ++ GF +ELD LR I + L ++ E + K +
Sbjct: 431 ----------KDGGY---IKNGFNEELDRLRNITGGGKDLLAQIEQQE--KEATGIKNLR 475
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
V Y GY + + + + ++ +GE Y T + ++++N +
Sbjct: 476 VG---YNRVFGYYIEVSKGNVSMVPDRYVRKQTLT----NGER----YITDELKKIENEI 524
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
KIL +E AI ++ I D + + A LD S A+V+ +NNY RP++
Sbjct: 525 LGANDKILALEAAIFAEVREFIAQRLDLIQQTAESVAALDVLCSYAVVSIENNYCRPMMA 584
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++I++GRH + E V+ F PND +D R+ IITGPN SGKS +++QVA+IV
Sbjct: 585 NDSVIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNRLMIITGPNMSGKSTFMRQVAVIV 644
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IG FVPA A +G+ D S ++A QS+FM+++ +V +L +AT SL +
Sbjct: 645 LMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVEMTEVATILNEATRNSLVI 704
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
LDE G+GT T DG+ + Y + + K L TH EL++ E L + ++ Y++
Sbjct: 705 LDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFATHYHELISLENEL---DGVRNYSV 761
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
V R EDI FL+++V G SYG+ A LAG+P +V RA +L
Sbjct: 762 KVKRSG------EDIKFLHKIVEGGTDDSYGIEVARLAGLPKKVTDRAKQLL 807
>gi|291530258|emb|CBK95843.1| DNA mismatch repair protein MutS [Eubacterium siraeum 70/3]
Length = 870
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 282/592 (47%), Gaps = 73/592 (12%)
Query: 168 SLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFL 227
S +F++L L++ T + G S+ +++K T MGRR LR
Sbjct: 269 SSGEFMQLGLATRRNLELTSTMRSGEKKG--------SLLWVLDKTDTSMGRRKLRQCIE 320
Query: 228 RPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDW-- 285
+P+ D + R +A+ + + + + L V D+ ++ + IY A++
Sbjct: 321 QPLTDTAAIIRRHDAVEALINNSAALYDIKTDLAKVYDLERLMTRI-----IYKAANAKD 375
Query: 286 TAFLKSICSLLHVNKI----FEVGISESLREQLRLLN--FDIVEKAASCITTELAYVYEL 339
L + C +L K ++ SL +++ L+ D+VE+A + L
Sbjct: 376 VKALGATCRILPQLKSDLSQISTQLTRSLDKKISPLDDIADLVERAIADEPPALM----- 430
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
K+ GY ++ GF +ELD LR I + L ++ E + K +
Sbjct: 431 ----------KDGGY---IKNGFNEELDRLRNITGGGKDLLAQIEQQE--KEATGIKNLR 475
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
V Y GY + + + + ++ +GE Y T + ++++N +
Sbjct: 476 VG---YNRVFGYYIEVSKGNVSMVPDRYVRKQTLT----NGER----YITDELKKIENEI 524
Query: 460 GDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
KIL +E AI ++ I D + + A LD S A+V+ +NNY RP++
Sbjct: 525 LGANDKILALEAAIFAEVREFIAQRLDLIQQTAESVAALDVLCSYAVVSIENNYCRPMMA 584
Query: 520 LEPLLDIQNGRHVLQEMTVDT--FIPNDTRID-NDGRINIITGPNYSGKSIYIKQVALIV 576
+ +++I++GRH + E V+ F PND +D R+ IITGPN SGKS +++QVA+IV
Sbjct: 585 NDSVIEIKDGRHPVVEKMVNEILFTPNDVYLDVKSNRLMIITGPNMSGKSTFMRQVAVIV 644
Query: 577 FLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCL 628
++ IG FVPA A +G+ D S ++A QS+FM+++ +V +L +AT SL +
Sbjct: 645 LMAQIGCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVEMTEVATILNEATRNSLVI 704
Query: 629 LDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTM 687
LDE G+GT T DG+ + Y + + K L TH EL++ E L + ++ Y++
Sbjct: 705 LDEIGRGTSTYDGVSIAKAVAEYISSKAIGCKTLFATHYHELISLENEL---DGVRNYSV 761
Query: 688 SVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
V R EDI FL+++V G SYG+ A LAG+P +V RA +L
Sbjct: 762 KVKRSG------EDIKFLHKIVEGGTDDSYGIEVARLAGLPKKVTDRAKQLL 807
>gi|300811157|ref|ZP_07091669.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497861|gb|EFK32871.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 856
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 278/584 (47%), Gaps = 58/584 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ ++L++ T L++ Q+ GR K+G S+F +++K T MG RLL+ W R
Sbjct: 250 IGQYLQMANTVQRNLELTQS------ATTGR-KQG-SLFWVLDKTTTAMGGRLLKQWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L L+ + R + L ++ ++LK V D+ + S + +
Sbjct: 302 PLLSLDRIKQRQQMVQALLDDYFTRENIVDSLKGVYDLERL-----SGRVAFGNVNPREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ SL I + ++ES L EK I + + ++D
Sbjct: 357 LQLAKSLEATKPIIQA-LAESGNPDL--------EKYGQGIDPQSELAESITNCLVDQPP 407
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
K G ++R G ++LD+ R+ ++L A +E+ + + I Y
Sbjct: 408 ISAKD-GGIIRAGVSEDLDKYREAMNGGKKWL---AQMEMEERQRTGIDNL--KIGYNRV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + + + ++ ++ T Y TP+ +E +NL+ + + D
Sbjct: 462 FGYFIQVSKGNVAKVPQDR-------YTRKQTLTNAERYITPELKEHENLILEAESRSTD 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E + L + L + A LD F++ A A + NY RP + + + ++N
Sbjct: 515 LEYELFSQLREAVKAHIPALQELGRQLAALDVFVAFAQDAEEKNYCRPSFSSKNEIAVKN 574
Query: 529 GRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH + E + ++IPND +D D I +ITGPN SGKS Y++Q+ALI ++ IGSFVP
Sbjct: 575 GRHPVVEAVLPAGSYIPNDLVMDEDTSIYLITGPNMSGKSTYMRQLALIAIMAQIGSFVP 634
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
AD+A + + D + + + +S+FM+++ + L+ A+S+SL L DE G+GT T
Sbjct: 635 ADSAKLPVFDQVFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDEIGRGTAT 694
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENNS 696
DG+ L G I Y V K L TH EL L+E LP + V E N
Sbjct: 695 YDGMALAGAIIKYL-HDKVGAKTLFATHYHELTELDE-TLP-----HLKNIHVGATEENG 747
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P V++ A+ +L+
Sbjct: 748 ----QLIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLK 787
>gi|448610427|ref|ZP_21661173.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
gi|445745051|gb|ELZ96521.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
Length = 939
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 172/636 (27%), Positives = 300/636 (47%), Gaps = 80/636 (12%)
Query: 126 SEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQI 185
S+ + RA G LLA E + LE + V +FL+LDATA +L++
Sbjct: 243 SDAECRAVGALLAYAEYAQGDSKLEY---------VTRVTRFDPREFLQLDATAIRSLEL 293
Query: 186 FQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISF 245
F + A+ G ++F ++++ +GRR L W RP++D + + +RL+A+
Sbjct: 294 FDSRS---------ARAGSTLFSVLDETACALGRRRLEAWLRRPLVDRDAIEARLDAVDA 344
Query: 246 FLCSEELM-ASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEV 304
LC + L A L + L V D+ ++ + + A D L+S+ + L +++ ++
Sbjct: 345 -LCDDALTRADLRDHLSAVYDLERLVARVSRER--ANARD----LRSLKTTL--DRVPDI 395
Query: 305 GISESLREQLRLLNFDIVEKAASCITT--ELAYVYELVIGIIDVNRSKEKGYGTLVREGF 362
RE L + D++ A C + EL V +LV + + +E G ++ +GF
Sbjct: 396 ------REALAETDADLL---ADCRESLPELDGVRDLVGRALVSDPPQEITDGGVIADGF 446
Query: 363 CDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDD 422
ELD+LR E E+ V+ LE + + +H GY + + LD
Sbjct: 447 DAELDDLRGTAEAGREW---VSKLEAEERERTGIDSLEVGYNQVH--GYYIEVTNPNLDR 501
Query: 423 TTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHIC 482
+ ++ S+ ++TP+ +E ++ + + +E + ++ + +
Sbjct: 502 VPDDYVRRQTLKNSER--------FYTPELKEREDEILRAADRADALEYDLFCEVRADVA 553
Query: 483 LFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPIL----------TLEPLLDIQNGRHV 532
S+ + + A+LD +LA VA N+Y RP T + ++I GRH
Sbjct: 554 AESERIQAVADVLADLDVLRTLADVAVANDYTRPEFRTEGPGESDRTSDGGIEIDAGRHP 613
Query: 533 LQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATV 592
+ E D F+PN + G + +ITGPN SGKS Y++QVAL+ L+ +GSFVPA+AA V
Sbjct: 614 VVERAQDEFVPNPASLPA-GSVTLITGPNMSGKSTYMRQVALVCILAQMGSFVPANAARV 672
Query: 593 GLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGL 644
+ D S + QS+FM ++ ++ +L AT SL LLDE G+GT T DG+ +
Sbjct: 673 PVIDRVFTRIGASDDIAGGQSTFMREMSELTDILHNATDDSLVLLDEVGRGTSTADGLAI 732
Query: 645 LGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVF 704
F+ ++ L TH +L + ++R + + + + ++ F
Sbjct: 733 ARAATE-FIHDEIGATTLFATHYHDLTDVA----ADRETVFNLHFTAAQRDG----EVTF 783
Query: 705 LYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
L+ + G + SYG+ A LAGVP V+ RA ++E
Sbjct: 784 LHSVADGPSSSSYGVEVAHLAGVPGTVVDRARSLVE 819
>gi|417916532|ref|ZP_12560109.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
gi|342829423|gb|EGU63777.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
Length = 844
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 269/594 (45%), Gaps = 71/594 (11%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLR---EQLRLLNFDIVEKAASCITTELAYVYEL 339
D ++ S+ + I E +L EQL D + + + I+ +A
Sbjct: 350 KDLLQLATTLSSVPRIRAILEAMEQPALAYLIEQL-----DAIPELENLISAAIAPEAPH 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 405 VIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGIS 448
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y + GY + +L + + S+ G T EL +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIE 497
Query: 460 GDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
GD+ K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 498 GDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRP 557
Query: 517 ILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVAL 574
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 558 EFGEDSQIDIQKGRHAVVEKVMGAQTYIPNSIQMAEDTSIQLITGPNMSGKSTYMRQLAM 617
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL
Sbjct: 618 TAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSL 677
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
L DE G+GT T DG+ L I Y + + K L TH EL + E L E L
Sbjct: 678 ILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---EHLVNV 733
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++ L + T FL+++ PG A SYG+H A +AG+PAE++ RA +L
Sbjct: 734 HVATLEQDGQVT------FLHKIEPGPADKSYGIHVAKIAGLPAELLARADKIL 781
>gi|22299783|ref|NP_683030.1| DNA mismatch repair protein MutS [Thermosynechococcus elongatus
BP-1]
gi|44888209|sp|Q8DGS4.1|MUTS_THEEB RecName: Full=DNA mismatch repair protein MutS
gi|22295967|dbj|BAC09792.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
Length = 874
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 181/654 (27%), Positives = 306/654 (46%), Gaps = 73/654 (11%)
Query: 110 SIKERICY---LNSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDS 163
+ ++R+C + S+ G E + +RA+GGL+A L+ +T Q+ + + +
Sbjct: 250 AARQRLCQRFQVKSLEGFGCEHLPLALRAAGGLVAYLD-----ETHRQQ-----PVPLQN 299
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
+ SL ++L LD L++ QT + S G S+ +++ T MG RLLR
Sbjct: 300 LSTYSLQQYLFLDPQTRRNLELTQTVRDGSFQG--------SLLWAIDRTATAMGGRLLR 351
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTAS 283
W L+P+LD+E + +R +AI+ + + L SLH L+ + D+ + + S + A
Sbjct: 352 RWLLQPLLDIEEITARQDAIAELMANSSLRQSLHRHLQEIYDLERLAGRAGSGT--ANAR 409
Query: 284 DWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGI 343
D A S +L+ + + S L+ +L ++E+ A ++ L
Sbjct: 410 DLAALRDSFRTLVSLAAVVANTSSPYLQALAQLP--PVIEQLADTLSAAL---------- 457
Query: 344 IDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCI 403
+D G ++R G ELD+ RQ E+ +++ + + E + + +
Sbjct: 458 VD-QPPTSLSEGGILRPGAYPELDQQRQQIEQDQQWILNLEAQERQR-----TGISTLKV 511
Query: 404 VYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIY 463
Y GY + + KL+ + ++ +R K RE LL
Sbjct: 512 GYTKVFGYYLSVSRAKLNQVPDDYIRKQTLT------NEERFITAELKEREA-RLLAAQS 564
Query: 464 HKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPL 523
H + ++E L + + + + A +D L LA VA Y RP LT +
Sbjct: 565 H-LFELEYQYFVQLREQVAAQASTIREIAAAVAAVDALLGLAEVALYQGYCRPQLTRDRQ 623
Query: 524 LDIQNGRHVLQEMTVDT--FIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHI 581
L I+ GRH + E T+ F+PNDT++ + ++TGPN SGKS Y++QV LI L+ +
Sbjct: 624 LCIRGGRHPVVEQTLPAGFFVPNDTQLGTGADLMVLTGPNASGKSCYLRQVGLIQLLAQM 683
Query: 582 GSFVPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFG 633
GS+VPA +AT+G+ D + QS+FM+++++ +L A +SL LLDE G
Sbjct: 684 GSYVPATSATLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHAGDRSLVLLDEIG 743
Query: 634 KGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPE 693
+GT T DG+ + Y T + + + TH EL L + + Y + V
Sbjct: 744 RGTATFDGLAIAWSVAEYLATI-LKSRTIFATHYHELNQLATLLPN--VANYQVVVKELP 800
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
N +I+FL+++ PG A SYG+ LAG+PA VI+RA V+ Q KH
Sbjct: 801 N------EIIFLHQVKPGGADRSYGIEAGRLAGLPAVVIQRAREVM--CQIEKH 846
>gi|375254470|ref|YP_005013637.1| DNA mismatch repair protein MutS [Tannerella forsythia ATCC 43037]
gi|363406473|gb|AEW20159.1| DNA mismatch repair protein MutS [Tannerella forsythia ATCC 43037]
Length = 870
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/603 (26%), Positives = 284/603 (47%), Gaps = 79/603 (13%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
I ++ + +++++LD +L++ QT M G G S+ ++++ +PMG R
Sbjct: 252 ISTLSRIEEDRYVRLDKFTVHSLELVQT------MNEG----GISLLDILDRTTSPMGAR 301
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFN----SP 276
LLR W L P+ DL+ + R + + +F + L L + D+ I+ K SP
Sbjct: 302 LLRRWLLFPLKDLDAIRRRQDTVEYFFRHPDDKDELCRLLGEIGDLERIISKVAVGRVSP 361
Query: 277 SFIY---TASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTEL 333
+ TA A ++ IC L+ N+ E L I E+ A I +
Sbjct: 362 REVVQLKTALQAIAPIREIC--LNGNEPSLQAFGEQLDPCAA-----ISERIAKEICNDP 414
Query: 334 AYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPH 393
+ VN+ G ++ G ELDELRQ+ ++L V E
Sbjct: 415 PAL---------VNK------GGIMAHGVSSELDELRQLSYSGKDYLMRVQQRE------ 453
Query: 394 LCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPK 451
+ +P I + + GY + + D E ++ ++ Y T +
Sbjct: 454 -SERTGIPSLKIAFNNVFGYYIEVRNTHKDKVPPEWIRKQTLVNAER--------YITEE 504
Query: 452 TRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQN 511
+E + + KIL +E + +LV+ + + + + + A+LDC LS A A N
Sbjct: 505 LKEYEEKILGAEEKILSLEMQLFNELVAELTNYIRPIQQDAHVIAQLDCLLSFAQTAQSN 564
Query: 512 NYMRPILTLEPLLDIQNGRHVLQEMTV---DTFIPNDTRID-NDGRINIITGPNYSGKSI 567
Y+RP++ ++DI+ GRH + E + + ++ ND +D +I +ITGPN +GKS
Sbjct: 565 RYIRPVVDDSDVIDIKGGRHPVIEQQLPAGEPYVANDVYLDKKQQQILMITGPNMAGKSA 624
Query: 568 YIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLR 619
++Q ALI ++ IGSFV AD+ +G D S +++ +S+FM+++++ +L
Sbjct: 625 LLRQTALITLMAQIGSFVSADSVRIGRVDKIFTRVGASDNISVGESTFMVEMNEAANILN 684
Query: 620 QATSQSLCLLDEFGKGTLTEDGIGLLGGTINYF-VTCDVPPKVLVCTHLTELLNEGCLPK 678
+ +SL L DE G+GT T DGI + + Y + L TH E LNE + +
Sbjct: 685 NLSPRSLVLFDELGRGTSTYDGISIAWAIVEYIHEQPQAAARTLFATHYHE-LNE--MER 741
Query: 679 S-ERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAY 737
S +R++ + +SV + ++FL +L PG + S+G+H A +AG+P ++KR+
Sbjct: 742 SFKRIRNFNVSV------KESGKKVIFLRKLTPGGSEHSFGIHVAKMAGMPKSIVKRSNE 795
Query: 738 VLE 740
+L+
Sbjct: 796 ILK 798
>gi|329121177|ref|ZP_08249805.1| DNA mismatch repair protein MutS [Dialister micraerophilus DSM
19965]
gi|327470259|gb|EGF15720.1| DNA mismatch repair protein MutS [Dialister micraerophilus DSM
19965]
Length = 852
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 277/579 (47%), Gaps = 69/579 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++ +++ T MG RLL+ W +P+ D+ + R N I + L +
Sbjct: 279 TLLELLDYTSTAMGGRLLKKWLEQPLTDVNRIILRQNGIEELRTHATELQKLESLFSSIF 338
Query: 265 DIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEK 324
D IL + + + + D + ++ + + K+ S I++
Sbjct: 339 DFERILARIEANTT--SPKDLLSLKATLKEIPEIKKVLSGASSV------------ILKN 384
Query: 325 AASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVA 384
S I T +VYEL+ ++ N + G ++ G+ ELDE+R + E +++ E+
Sbjct: 385 INSNIKTH-KFVYELLDKSMNENGTGSIRDGKYIKNGYSKELDEVRSLAENSRKWITELE 443
Query: 385 SLELVQLPHLCKEMFVPCIVYIHQIGYL--MCIFEEKLDDTTLEQLQGFEFAFSDMDGET 442
E + K F Y +I + + I E + TL ++ E
Sbjct: 444 KSEKEKTGIKLKIGFNNIFGYYFEITHANKIPIPEYYVRKQTL------------VNAER 491
Query: 443 KRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFL 502
Y TP+ +E + + K+ ++E + +D+ I + + K A LDC
Sbjct: 492 ----YITPELKEFEAKVLVAKEKMSELELELYKDIKKQIYPYIAEMQKTARTIAGLDCLS 547
Query: 503 SLALVAHQNNYMRPIL--TLEPLLDIQNGRHVLQEMTV--DTFIPNDTRIDN-DGRINII 557
LA A + Y++P++ + + I +GRH + E + + FIPND +++ + + +I
Sbjct: 548 GLARAALKERYIKPVIECSKNKHISINDGRHPMVEHALKNEMFIPNDIELNHANQELLVI 607
Query: 558 TGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAT----------VGLTDSKHMTAEQSSF 607
TGPN +GKS +++QVA++V ++ IGSF+PA +A VG TD ++ QS+F
Sbjct: 608 TGPNMAGKSTFMRQVAVLVIMAQIGSFIPAKSAVISPVDRIFTRVGATDD--ISTGQSTF 665
Query: 608 MIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHL 667
M+++ +V +L+ AT SL LLDE G+GT T DG+ + + YF ++ L TH
Sbjct: 666 MVEMQEVSHILKHATENSLVLLDEIGRGTSTYDGMSIAKAVVEYF-DKNIHAYTLFATHY 724
Query: 668 TELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGV 727
EL + S+++K +T++V E+I FL R+VPG A SYG+H A LAG+
Sbjct: 725 HELSDMAST--SKKIKNFTVTV------KERGEEITFLRRIVPGCADRSYGIHVARLAGL 776
Query: 728 PAEVIKRAAYVLE--AAQNNK--------HVERWSHENI 756
P ++K+A+ +L+ +Q+NK VE S EN+
Sbjct: 777 PESLLKQASAILDNLESQDNKSSNKKIMEKVENTSEENL 815
>gi|409098138|ref|ZP_11218162.1| DNA mismatch repair protein MutS [Pedobacter agri PB92]
Length = 859
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/593 (26%), Positives = 288/593 (48%), Gaps = 71/593 (11%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
++F +++ TPMG RLL+ W + P+ +L+ + RL + FF+ +EE+ +K +
Sbjct: 278 TLFDILDHTSTPMGARLLQKWIIMPLKELKPIEERLGMVDFFVKNEEIQQEFLTHIKQIG 337
Query: 265 DIPHILKKFN----SPSFIYTASDWTAFLKSICSLLHVNK-IFEVGISESLREQLRLLNF 319
DI ++ K P + ++++ +L +K F + I++ L L
Sbjct: 338 DIERLISKVGLQRVGPRELVALKRALIHIEAVKNLAANSKNTFLIKIADQLNPCLA---- 393
Query: 320 DIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEF 379
I E+ + E + LV G ++ +G ++LD LR+I ++
Sbjct: 394 -IRERIERELQPEPPAL--LV-------------KGNVISDGVDEDLDRLRKIAFGGKDY 437
Query: 380 LEEVASLELVQLPHLCKEMFVPC--IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSD 437
L ++ E + +P I + + GY + + D +G+ +
Sbjct: 438 LVQIQKRE-------AEATGIPSLKISFNNVFGYYLEVTHTHKDKVP----EGWIRKQTL 486
Query: 438 MDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAE 497
++ E Y TP+ +E + + KI +E + +L+ + + A+
Sbjct: 487 VNAER----YITPELKEYEEQILGAEEKIQAIEIRLYNELMYETAGYIKPIQLNAFLIAQ 542
Query: 498 LDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDT---FIPNDTRIDNDGR- 553
LDC L A +A +N+Y++P + + +LDI+ GRH + E + +I ND +D+D +
Sbjct: 543 LDCLLCFAQLAEKNHYVKPTVNKDKVLDIKGGRHPVIEKQLPVGQEYITNDVYLDSDSQQ 602
Query: 554 INIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQS 605
I +ITGPN +GKS ++Q ALIV ++ +GSFVPA AA VGL D S ++++ +S
Sbjct: 603 IIMITGPNMAGKSAILRQTALIVLMAQMGSFVPAKAADVGLVDKIFTRVGASDNISSGES 662
Query: 606 SFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVP-PKVLVC 664
+FM+++++ +L + SL LLDE G+GT T DGI + + PK L
Sbjct: 663 TFMVEMNETASILNNISDNSLILLDEIGRGTSTYDGISIAWAIAEFLHQHPTSRPKTLFA 722
Query: 665 THLTELLNE--GCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
TH E LNE +P R+K + +SV N ++FL +LVPG + S+G+H A
Sbjct: 723 THYHE-LNELANTMP---RIKNFNVSVKEMTNK------VIFLRKLVPGGSEHSFGIHVA 772
Query: 723 LLAGVPAEVIKRAAYVLEAAQNNKHVERWSHENISAQDQQYKNAVEKMLAFDV 775
+AG+P ++I RA +L+ + ++R ++I ++ +N ++ F +
Sbjct: 773 KMAGMPPKLIGRANEILKKLE----IDRTEGQSIKDSIKKVQNQAYQLQMFAI 821
>gi|189183338|ref|YP_001937123.1| DNA mismatch repair protein MutS [Orientia tsutsugamushi str.
Ikeda]
gi|238692235|sp|B3CQY2.1|MUTS_ORITI RecName: Full=DNA mismatch repair protein MutS
gi|189180109|dbj|BAG39889.1| DNA mismatch repair protein MutS [Orientia tsutsugamushi str.
Ikeda]
Length = 889
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 176/616 (28%), Positives = 297/616 (48%), Gaps = 78/616 (12%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
VS F+ +DA+A + L++ T G K S+ +++ VT G RLL +
Sbjct: 276 VSYENFMLIDASARKNLELTSTLS-------GNLKG--SLLSVIDATVTNQGGRLLHKFL 326
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWT 286
P+ ++ +NSRL FF + +L+ +L E +K V DI L + I A
Sbjct: 327 STPLAEVNLINSRLQITDFFYQNLQLVENLRELVKLVPDIERALSR------ILIAKALP 380
Query: 287 AFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG---- 342
L+SI KI + I+ S++++L ++E+ I L +Y + G
Sbjct: 381 KDLESI-------KI-SLKIALSIKKELN----KVLEEEN--IPKYLEEIYNPLFGDDEL 426
Query: 343 ------IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCK 396
+ + S G ++ + +L+ELR + F+E+ L+L C
Sbjct: 427 YDLLDSALLDDLSNSANDGGFIKSSYSTKLEELRNLIYNSSHFIEQ---LKLQYRQETCI 483
Query: 397 EMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELD 456
E C H + M I ++ ++ +F R +T E
Sbjct: 484 ETLKIC----HNNVWGMFI---EVSSKNAHKITDSKFVHKQTTTTAVRFTTTELQTLEAK 536
Query: 457 NLLGDIYHKILDMERAITRDLVSHICLFSD---HLLKAVNFAAELDCFLSLALVAHQNNY 513
L L+ E I +L I L S+ HL K+++ +D F + A ++H+ NY
Sbjct: 537 MLNAKTMAAALEQE--ILAELCKAISLKSEKLSHLAKSISL---IDVFCNFAYISHEFNY 591
Query: 514 MRPILTLEPLLDIQNGRHVLQEMTV----DTFIPNDTRIDNDGRINIITGPNYSGKSIYI 569
RP +T + +I NGRH + E + ++FI ND + ND RI +ITGPN +GKS ++
Sbjct: 592 CRPEITSDLAFNIVNGRHTVIEKLITKKHESFISNDCNLQNDQRIWLITGPNMAGKSTFL 651
Query: 570 KQVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQA 621
+Q A+IV L+ IG +VPA +A +G+ D + + + QS+FM+++ + ++L Q+
Sbjct: 652 RQNAIIVILAQIGCYVPAQSAQIGVVDKLFSRIGAADDLASGQSTFMVEMVETSVILAQS 711
Query: 622 TSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSER 681
T +SL +LDE G+GT T DGI + + Y + ++ + L TH EL++ K +
Sbjct: 712 TFRSLVILDEIGRGTSTYDGISIAWSCLEY-IHSNIRCRCLFATHYHELVDLA--SKLQS 768
Query: 682 LKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEA 741
LK +T+ + ++S D + FLY+++ G A SYG+H A LAG+P V+ RA +L
Sbjct: 769 LKNFTVKI----HDSND--KLSFLYKIIEGAANKSYGIHVAELAGLPRIVLNRAKEILLE 822
Query: 742 AQNNKHVERWSHENIS 757
++NK S+ NI+
Sbjct: 823 LEHNKADINQSNNNIT 838
>gi|307710199|ref|ZP_07646643.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
gi|307619179|gb|EFN98311.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
Length = 844
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 268/590 (45%), Gaps = 63/590 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ +S L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQSALSYL-IEQLDRIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------DGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAIVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 561 DDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAI 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQMGSYVPAESARLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSV 689
DE G+GT T DG+ L I Y + + K L TH EL + E L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTS--LASSLEHLVNVHVAT 737
Query: 690 LRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
L + + FL+++ PG A SYG+H A +AG+PA+++ RA +L
Sbjct: 738 LEQDGQ------VTFLHKIEPGPADKSYGIHVAKIAGLPADLLARADKIL 781
>gi|401683891|ref|ZP_10815776.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
gi|418975559|ref|ZP_13523463.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|383347542|gb|EID25520.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|400186931|gb|EJO21136.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
Length = 844
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/597 (27%), Positives = 271/597 (45%), Gaps = 71/597 (11%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ VI + FL++D +L + + + G S+F ++++ T MG R
Sbjct: 238 LKPVIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMR 289
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR+W RP++D E + R + FL + L ++LK V DI + + SF
Sbjct: 290 LLRSWIHRPLIDKERIVQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGK 346
Query: 281 T-ASDWTAFLKSICSLLHVNKIFEVGISES----LREQLRLLNFDIVEKAASCITTELAY 335
T D ++ S+ + I E G+ + L EQL D + + S I+ +A
Sbjct: 347 TNPKDLLQLATTLSSVPRIRAILE-GMEQPALAYLIEQL-----DAIPELESLISAAIAP 400
Query: 336 VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLC 395
VI G ++R GF + LD+ R++ E ++ E+ + E
Sbjct: 401 EAPHVIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----REN 444
Query: 396 KEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTREL 455
+ I Y + GY + +L + + S+ G T EL
Sbjct: 445 SGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEEL 493
Query: 456 DNLLGDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNN 512
+ GD+ K ++E I + + + L A +D SLA+VA +
Sbjct: 494 ARIEGDMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATVDVLQSLAVVAEIQH 553
Query: 513 YMRPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIK 570
+RP + +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++
Sbjct: 554 LIRPEFGDDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMR 613
Query: 571 QVALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQAT 622
Q+A+ ++ +GS+VPA++A + + D + + + QS+FM+++ + + AT
Sbjct: 614 QLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHAT 673
Query: 623 SQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL 682
SL L DE G+GT T DG+ L I Y + + K L TH EL + G E L
Sbjct: 674 KDSLILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLGS--SLEHL 730
Query: 683 KFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVL 739
++ L + T FL+++ PG A SYG+H A +AG+PAE++ RA +L
Sbjct: 731 VNVHVATLEQDGQVT------FLHKIEPGPADKSYGIHVAKIAGLPAELLARADKIL 781
>gi|448589693|ref|ZP_21649852.1| DNA mismatch repair protein MutS [Haloferax elongans ATCC BAA-1513]
gi|445736121|gb|ELZ87669.1| DNA mismatch repair protein MutS [Haloferax elongans ATCC BAA-1513]
Length = 905
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 210/774 (27%), Positives = 358/774 (46%), Gaps = 119/774 (15%)
Query: 4 YMACILHGHR--VGVSYYDSSIRQLHVLEV--WEDSNSDFPLIDIVKYQAQPQIIYTSTK 59
++A I+ G +G+++ D + Q V E ED+ ++ V+ P + +
Sbjct: 118 FLAAIVTGRSGGLGLAFADVTTGQFLVTEADTVEDAAAELYRFSPVEVLPGPDL-----R 172
Query: 60 SEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLN 119
+++ LS L+ + T+A + L S F+ +A H +++E+ +
Sbjct: 173 ADDETLSQLRDA---TDA-SFSLFSSDAFAPGRARH--------------AVREQ--FGE 212
Query: 120 SMMD---MGSEVQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEV-SLNKFLKL 175
S +D + SE+ RA+GG+LA +E E+G + + + V + L+L
Sbjct: 213 STVDSVGLDSELATRAAGGILAYVE-----------ETGAGVLRSMTRLRVYHPSDLLEL 261
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
DAT L++ +T H G S+F ++ VT G RLLR W RP D +
Sbjct: 262 DATTQRNLELTET-MHGDRSG--------SLFDTIDHTVTAPGGRLLREWLTRPRRDRDE 312
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKF--------NSPSFIYTASDWTA 287
L R +A+ + A E ++ V D + L++ S + + D
Sbjct: 313 LARRHDAVESLASA----ALARERVRDVLDGAYDLERLASRAASGSADASALLSVRDTLD 368
Query: 288 FLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVN 347
L ++ + ++ + +++ + R AA+ + EL + +
Sbjct: 369 ILPALADAIEGTELADTPLADVVARPDR--------DAAADLQAELDDA-------LAED 413
Query: 348 RSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVY 405
K G L ++G+ +ELD+L + +E +++ +A E Q L H+ + Y
Sbjct: 414 PPKTVTQGGLFQKGYDEELDDLIERHESAKSWIDTLADREKRQHGLSHVTVDRNKTDGYY 473
Query: 406 IHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHK 465
I Q+G + +++ D Q++ + +KR + +E D L +
Sbjct: 474 I-QVGKSVA---DQVPD-HYRQIKTLK--------NSKRFVTEELEEKERDILR--LEEA 518
Query: 466 ILDMERAITRDLVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPLL 524
D+E + +DL + ++ LL+ V A AE+D SLA A N + RP LT +L
Sbjct: 519 RGDLEYDLFQDLRERVAAHAE-LLQDVGRALAEVDALASLAAHAAGNGWTRPELTEPGVL 577
Query: 525 DIQNGRHVLQEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSF 584
++ GRH + E T D F+PND +D++ I+TGPN SGKS Y++Q ALI L+ +GSF
Sbjct: 578 HVEAGRHPVVETTTD-FVPNDLHMDDERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSF 636
Query: 585 VPADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGT 636
VPADAAT+G+ D + +S+FM+++ ++ +L AT SL +LDE G+GT
Sbjct: 637 VPADAATIGVVDGIYTRVGALDELAQGRSTFMVEMQELSNILHSATEDSLVILDEVGRGT 696
Query: 637 LTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERL-KFYTMSVLRPENN 695
T DGI + Y +V K L TH EL + ++ L + + V E +
Sbjct: 697 ATYDGISIAWAATEYL-HNEVRAKTLFATHYHELTS-----LADHLDRVANVHVAADERH 750
Query: 696 STDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVE 749
D+ FL +V G SYG+H A LAGVP V+ RA+ VL+ ++ K +E
Sbjct: 751 G----DVTFLRTVVDGPTDRSYGIHVADLAGVPRPVVDRASDVLDRLRDEKAIE 800
>gi|268552285|ref|XP_002634125.1| C. briggsae CBR-MSH-5 protein [Caenorhabditis briggsae]
Length = 1299
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 182/679 (26%), Positives = 307/679 (45%), Gaps = 104/679 (15%)
Query: 79 TVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSM-MDMGSEVQVRASGGLL 137
T+ + ++ F A RL + G DD E + +M D+ + +R+ G LL
Sbjct: 185 TLHKLPNNFFKMPNALQRLKMM--VGSDDAKMTDEDKHIIVAMRFDIEAVNMMRSFGALL 242
Query: 138 AVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGI 197
L+ R+ + + + S I S+ ++L + +D + +AL I + S +
Sbjct: 243 LFLDETRLG---VENQPLSVSSPIKSIKTMTLENLVDIDYSTIQALDILPKEIE-SKKNV 298
Query: 198 GRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFL--CSEELMAS 255
G+ + S+F ++++C + +G++ L+ WF P D L SR + +F + E+ A
Sbjct: 299 GKDR---SLFSLVDRCRSTVGKKCLKKWFKNPTTDRAVLLSRQKCVHYFKQDWNAEITAK 355
Query: 256 LHETLKYVKDIPHILKKFNSPSFIYTAS--DWTAFLKSICSLLHVNKIFEVGISESLREQ 313
+ L V + ++ ++F S TA W F+ ++ +L+ V I LR+
Sbjct: 356 IASMLGKVTALNNVFQRFQS----GTAKLLHWECFVSTVNALVDVVHI--------LRQT 403
Query: 314 LRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIY 373
F + + + TE++ + + II+ S+ +G T V +ELD+LR IY
Sbjct: 404 PIAKEFPV----ENSLLTEVSEIAIIASSIINFAESRIQGRVT-VNPAIDEELDKLRDIY 458
Query: 374 EELPEFLEEVASLELVQLPHLCKEMFVP-CIVYIHQIGYLMCIFEEKLDDTTLEQLQGFE 432
E +P FL VA E +L + F IVYI +G+++ + + +E
Sbjct: 459 ENMPLFLTAVAKQECARL---GLDAFSNVTIVYIPLVGFVLSL----PTNFPVENYSDMS 511
Query: 433 FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAV 492
++ D + T LD+ GDI K++D + AI L + + + K +
Sbjct: 512 LVYAKSD----EVRVRNETTERLDDEYGDILMKLIDSQTAIILALKTRVLKKKRSISKLL 567
Query: 493 NFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD-TFIPNDTRIDND 551
+ AA +D +S+ LVA +N + P L EP+++ H + + V F+PN D
Sbjct: 568 SVAARIDALISMGLVAAENGWNCPTLMDEPVIEALELFHPISVLVVKKNFVPNKVTSGRD 627
Query: 552 G-RINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD---SKHMTAEQ--- 604
G + +IITGPN GKS+Y+K + ++ FL+HIGSFVPA A VG+ D ++ T +
Sbjct: 628 GIKASIITGPNACGKSVYMKSIGILAFLTHIGSFVPARYAKVGIVDRIVTRMFTVDSVLD 687
Query: 605 --SSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVL 662
S+F D+ QV LR+AT SL ++DEFGKGT+TE
Sbjct: 688 GMSTFAKDVEQVAFALRKATGNSLVIIDEFGKGTMTE----------------------- 724
Query: 663 VCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCA 722
T VLR I +L++L PG S+ + A
Sbjct: 725 -----------------------TFKVLREGEGK-----IKYLFQLAPGLIDCSFXMAVA 756
Query: 723 LLAGVPAEVIKRAAYVLEA 741
+ G+P VI RA + +A
Sbjct: 757 IEEGIPMPVIGRACRIYKA 775
>gi|425452714|ref|ZP_18832529.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 7941]
gi|389765380|emb|CCI08710.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 7941]
Length = 882
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 197/769 (25%), Positives = 335/769 (43%), Gaps = 107/769 (13%)
Query: 6 ACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEE--S 63
A ++ G G++Y D S + + + SD + + + QP I + +
Sbjct: 159 AVVITGENWGLAYSDISTGEFYTTQA-----SDLTALSLELTRLQPSEILFPINAPDLNR 213
Query: 64 FLSALKRSDGTT----EAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICY-L 118
L ++SD ++ L +IF+ +A +RL+ I Y +
Sbjct: 214 ILRPGEKSDHLPPCLPDSFCYSLRPQTIFTLTEAKNRLL----------------ITYKM 257
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNASITIDSVIEVSLNKFLKL 175
S+ MG E + +RA+GGLL +E+ + + + + + S+++FL L
Sbjct: 258 RSLEGMGCEHLPLAIRAAGGLLEYIEDTQKAN----------QVPLQPLKTYSISEFLIL 307
Query: 176 DATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEN 235
D L+I QT + S G S+ +++ T MG R LR W L+P+LD
Sbjct: 308 DGQTRRNLEITQTVRDGSFYG--------SLLWAIDRTCTAMGSRALRRWLLQPLLDSRG 359
Query: 236 LNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSL 295
+ +R + I + L + + L + DI + + + + A D + S+ L
Sbjct: 360 IRARQDTIQELKDNPSLRQDIRQKLGEIYDIERLSGRVGAGT--ANARDLLSLAASLVKL 417
Query: 296 LHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYG 355
+ + G S L KA I +L + + VI + + G
Sbjct: 418 ADLAALVASGNSPYL-------------KALQQIPADLEKLGQQVIAHLVESPPLHLKEG 464
Query: 356 TLVREGFCDELDELRQIYEELPEFLE--EVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
++R+G +LD LR+ Y+E+ ++ + E E + +L + Y GY +
Sbjct: 465 GVIRQGIDAQLDALRRDYQEVIDWFKNLETTEKERTGISNLK-------VNYNKTFGYYI 517
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ K D E ++ + Y T + +E +N++ ++ ++E I
Sbjct: 518 SLPRSKADFAPKEYVRKQTLVNEER--------YITTELKEKENIILTAVDELNNLEYEI 569
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
DL + FS + + A LD +LA +A Y RP + L+DI++GRH
Sbjct: 570 FSDLRRQVAEFSPEIREVATKVAALDVLAALAEIAVYQGYCRPEIADGRLIDIKDGRHPV 629
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V Q + F+PN + N + I+TGPN SGKS Y++QV LI L+ GSFVP
Sbjct: 630 VEQSLGAGFFVPNSINLGNQEGLEYPDLIILTGPNASGKSCYLRQVGLIQLLAQTGSFVP 689
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +A + + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 690 AKSAKISICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATDRSLVLLDEIGRGTAT 749
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + Y T + + + TH EL + E + Y ++V +
Sbjct: 750 FDGLSIAWSVAEYLATV-LQSRTIFATHYHELNELASI--LENVANYQVTVKELPH---- 802
Query: 699 VEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKH 747
+IVFL+++ PG A SYG+ LAG+P VI RA V+ Q KH
Sbjct: 803 --EIVFLHQVRPGGADKSYGIEAGRLAGLPTSVIDRAMQVM--GQIEKH 847
>gi|307710940|ref|ZP_07647365.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
gi|307617241|gb|EFN96416.1| DNA mismatch repair protein MutS [Streptococcus mitis SK321]
Length = 844
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 163/597 (27%), Positives = 272/597 (45%), Gaps = 65/597 (10%)
Query: 164 VIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLR 223
VI + FL++D +L + + + G S+F ++++ T MG RLLR
Sbjct: 241 VIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMRLLR 292
Query: 224 NWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYT-A 282
+W RP++D E + R + FL + L ++LK V DI + + SF T
Sbjct: 293 SWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGKTNP 349
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
D ++ S+ + I E G+ + L + D + + S I+ +A VI
Sbjct: 350 KDLLQLATTLSSVPRIRAILE-GMEQPALAYL-IAQLDAIPELESLISAAIAPEAPHVIT 407
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 408 -----------DGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGISTLK 451
Query: 403 IVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDI 462
I Y + GY + +L + + S+ G T EL + GD+
Sbjct: 452 IDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIEGDM 500
Query: 463 YH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILT 519
K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 501 LEAREKSANLEYEIFMRIREEVSKYIQRLQVLAQGIATVDVLQSLAVVAETQHLIRPEFG 560
Query: 520 LEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVF 577
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+ V
Sbjct: 561 DDSRIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTVV 620
Query: 578 LSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLL 629
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL L
Sbjct: 621 MAQLGSYVPAESAYLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKNSLILF 680
Query: 630 DEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFYTMS 688
DE G+GT T DG+ L I Y + + K L TH EL + E L + L ++
Sbjct: 681 DELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSL---QHLVNVHVA 736
Query: 689 VLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
L + T FL+++ PG A SYG+H A +AG+PA+++ RA +L +N
Sbjct: 737 TLEQDGQVT------FLHKIEPGPADKSYGIHVAKIAGLPADLLARADKILTQLENQ 787
>gi|385816195|ref|YP_005852586.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126232|gb|ADY85562.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 856
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 277/584 (47%), Gaps = 58/584 (9%)
Query: 169 LNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLR 228
+ ++L++ T L++ Q+ GR K+G S+F +++K T MG RLL+ W R
Sbjct: 250 IGQYLQMANTVQRNLELTQS------ATTGR-KQG-SLFWVLDKTTTAMGGRLLKQWLSR 301
Query: 229 PILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAF 288
P+L L+ + R + L ++ ++LK V D+ + S + +
Sbjct: 302 PLLSLDRIKQRQQMVQALLDDYFTRENIVDSLKGVYDLERL-----SGRVAFGNVNPREL 356
Query: 289 LKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNR 348
L+ + L K+ ++ES L EK I + + ++D
Sbjct: 357 LQ-LAKSLEATKLIIQTLAESGNPDL--------EKYGQGIDPQSELAESITNCLVDQPP 407
Query: 349 SKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQ 408
K G ++R G ++LD+ R+ ++L A +E+ + + I Y
Sbjct: 408 ISAKD-GGIIRAGVSEDLDKYREAMNGGKKWL---AQMEMEERQRTGIDNL--KIGYNRV 461
Query: 409 IGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILD 468
GY + + + + ++ ++ T Y TP+ +E +NL+ + + D
Sbjct: 462 FGYFIQVSKGNVAKVPQDR-------YTRKQTLTNAERYITPELKEHENLILEAESRSTD 514
Query: 469 MERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQN 528
+E + L + L + A LD F++ A A + NY RP + + + ++N
Sbjct: 515 LEYELFSQLREAVKAHIPDLQELGRQLAALDVFVAFAQDAEEKNYCRPSFSSKNEIAVKN 574
Query: 529 GRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
GRH + E + ++IPND +D D I +ITGPN SGKS Y++Q+ALI ++ IGSFVP
Sbjct: 575 GRHPVVEAVLPASSYIPNDLVMDEDTSIYLITGPNMSGKSTYMRQLALIAIMAQIGSFVP 634
Query: 587 ADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
AD+A + + D + + + +S+FM+++ + L+ A+S+SL L DE G+GT T
Sbjct: 635 ADSAKLPVFDQIFTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDEIGRGTAT 694
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTEL--LNEGCLPKSERLKFYTMSVLRPENNS 696
DG+ L G I Y V K L TH EL L+E L + V E N
Sbjct: 695 YDGMALAGAIIKYL-HDKVGAKTLFATHYHELTELDETL------LHLKNIHVGATEENG 747
Query: 697 TDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
++FL++++PG A SYG+H A LAG+P V++ A+ +L+
Sbjct: 748 K----LIFLHKILPGPADQSYGIHVAKLAGLPRAVLREASSMLK 787
>gi|257051580|ref|YP_003129413.1| DNA mismatch repair protein MutS [Halorhabdus utahensis DSM 12940]
gi|256690343|gb|ACV10680.1| DNA mismatch repair protein MutS [Halorhabdus utahensis DSM 12940]
Length = 915
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 206/810 (25%), Positives = 347/810 (42%), Gaps = 115/810 (14%)
Query: 4 YMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSEES 63
Y+A I+ G G+++ D + + V +V ++ D ++ ++ + + ++++
Sbjct: 118 YLAAIVEGEAWGLAFADVTTGEFFVTQV---ADRDAVFSELYRFDPAEVLPGPTVRADDE 174
Query: 64 FLSALK-RSDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRVTGMDDGLSIKERICYLNSMM 122
+ L+ R+D + V L + F+ +A HRL T + + I +
Sbjct: 175 MIERLRERTDAS-----VSLHATEAFAPGRARHRLREQFGTETIESVGIGD--------- 220
Query: 123 DMGSEVQVRASGGLLAVLENERIVDTLEQKESGNASI-TIDSVIEVSLNKFLKLDATAHE 181
+E + A G +L+ +E E+G + ++ + + ++LDAT
Sbjct: 221 ---AESAIAAGGAVLSYVE-----------ETGQGVLASMTRLQRYGASDHVELDATTQR 266
Query: 182 ALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLN 241
L++ +T R + S+ ++ VT G R LR W RP E L+ R +
Sbjct: 267 NLELTET---------MRGERTGSLLDTIDHTVTSAGTRTLRAWLQRPRRSRETLDRRGD 317
Query: 242 AISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICSLLHVNKI 301
++ L + L D+ + K S S A D A + ++ V I
Sbjct: 318 SVEALATEAMARERLRDVLGDAYDLERLASKAASGS--ADARDLRAAVDTLELFETVRAI 375
Query: 302 FEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREG 361
V + +L E D + AA I+D + G ++REG
Sbjct: 376 --VRETPTLAESPLSTWLDEPDPAAVATLAADLDAA-----IVD-DPPGTITEGGIIREG 427
Query: 362 FCDELDELRQIYEELPEFLEEVASLELVQ--LPHLCKEMFVPCIVYIH----QIGYLMCI 415
+ ELDE+ +E E++E + E + + HL + YI + G +
Sbjct: 428 YDAELDEVIDEHETALEWIETLPEREQREHGITHLSVDRNKTDGYYIQVGKSETGKVPDH 487
Query: 416 FEEKLDDTTLEQLQGFE-FAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAIT 474
+E ++ L+ E + +++ +++F + + D+ER
Sbjct: 488 YE------NVKTLKNSERYTIAELTERERKIFR--------------LEERRHDLERQCF 527
Query: 475 RDLVSHICLFSDHLLKAVNFA-AELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVL 533
+L + +D LL+ V A A +D +LA A +N++ RP L LD++ GRH +
Sbjct: 528 EELREAVADHAD-LLQGVGQALAAVDVMAALATHAVRNDWTRPTLRDSRALDVEAGRHPV 586
Query: 534 QEMTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVG 593
E T + F+PND R+D+D R I+TGPN SGKS Y++Q ALIV L+ IGSFVPA +A VG
Sbjct: 587 VEQTTE-FVPNDLRMDDDRRFLIVTGPNMSGKSTYMRQAALIVLLAQIGSFVPARSAEVG 645
Query: 594 LTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
L D + +S+FM+++ ++ +L AT SL +LDE G+GT T DG+ +
Sbjct: 646 LVDGIYTRVGALDELAQGRSTFMVEMQELANILHSATEDSLVILDEVGRGTATYDGVSIA 705
Query: 646 GGTINYF---VTCDVPPKVLVCTHLTELLN-----EGC----LPKSERLKFYTMSVLRPE 693
Y + PK L TH EL G + E P
Sbjct: 706 WAATEYLSSAQSASPSPKTLFATHYHELTTLADHISGVENVHVAVDEPAGGTDGDDAGPP 765
Query: 694 NNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSH 753
+D+ FL + G A SYG+H A LAGVP V+ RA VL + ++ +
Sbjct: 766 TTDGADDDVTFLRTVRDGPADRSYGVHVATLAGVPDPVVSRAREVLRKLRADEAI----- 820
Query: 754 ENISAQDQQYKNAVE--KMLAFDVLKGDLR 781
D Q A E + + FD+ G+LR
Sbjct: 821 ------DVQNGRASEETRQVVFDLDSGELR 844
>gi|261203581|ref|XP_002629004.1| DNA mismatch repair protein Msh5 [Ajellomyces dermatitidis
SLH14081]
gi|239586789|gb|EEQ69432.1| DNA mismatch repair protein Msh5 [Ajellomyces dermatitidis
SLH14081]
Length = 910
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 204/812 (25%), Positives = 356/812 (43%), Gaps = 150/812 (18%)
Query: 2 QVYMACILHGH-RVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
QV MA + VG YY ++ ++L++LE + ++ I+ +K QP ++ ST++
Sbjct: 89 QVVMAMDMKERCSVGCCYYVAAEQKLYLLE--DITSGGLEAIETLKLDVQPTLVLLSTRA 146
Query: 61 EESFLSALKRSDGTTEAPT-----------VKLVKSSIFSYEQAWHRLIYL--------- 100
++S + + G A V+ V+ F++E A +L L
Sbjct: 147 DQSTPNLGQTGLGMHTADNGDQFQLPYHLDVRPVQE--FNFEGAKLKLASLPLSTSRSET 204
Query: 101 RVTGMDDGLSIKE--------------RICYLNSMMDMGSEVQVRASGGLLAVLENERIV 146
R D S+K+ R+ L+ +DM + + + G ++ L+ +R
Sbjct: 205 RFLVPGDTFSLKQNGDENDLGFTDHQGRLLNLSGSIDMDNRISIGCVGAIITYLQRKRAA 264
Query: 147 DTLEQKESGNASITIDSVIEVSLNKFLKLDATAHEALQIFQTDKHPS--HMGIGR----A 200
+ L + SG+ I S+ SL + ++ +LQ+ Q++ HP+ + G G+ A
Sbjct: 265 ECLTRDSSGSELFNIKSLEMRSLRDTMFVNTDTLTSLQVIQSESHPNAFNQGPGKTSPGA 324
Query: 201 KEGFSVFGMMNK-CVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSE--ELMASLH 257
KE S++G+ + TP G+ LR FLRP D ++ + IS +L + E + L
Sbjct: 325 KESLSIYGLFHHFARTPHGKTRLRQRFLRPSTDAAHIKEGHDFISTYLRPDNGECIEKLT 384
Query: 258 ETLKYVKDIP----HILKKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQ 313
++LK +K++ H+ K +S + + + AF + + L + + +++R
Sbjct: 385 KSLKGIKNLRPVMVHVQKGISSGN-----AKFKAFKSGVWATLLEFAFHAIDVHDTIRTV 439
Query: 314 LRLLNFDIVEKAASCITTELAY-VYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQI 372
+ N DI +A + + + V ++ +D+ S ++ + T+V+ ELD+L++
Sbjct: 440 MGAENLDIHLRALEKLDVAILHQVGRIIHETVDLQSSIDE-HRTVVKPRVDRELDDLKET 498
Query: 373 YEELPEFLEEVASLELVQLP-HLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGF 431
Y L L +VA +P L ++ V +Y Q+G+ + + LD+ G
Sbjct: 499 YNGLDSLLNQVAINIAGTIPSRLSNDVNV---IYFPQLGFNIAM---PLDERGRAVYDGG 552
Query: 432 EFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKA 491
E + + R+++ + RE+D GDIY I + E I ++ ++ L+ A
Sbjct: 553 EQPWDQVFTTENRVYFKDFRMREMDEKFGDIYGLICEKEIEIVYEMAQNVLQHEKFLVDA 612
Query: 492 VNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVDTFIPNDTRI-DN 550
+ ++D H+L E+TV TFIPNDT I
Sbjct: 613 SDICGDIDS------------------------------HLLYEVTVPTFIPNDTLIVGG 642
Query: 551 DGRIN-------------------------IITGPNYSGKSIYIKQVALIVFLSHIGSFV 585
+GR ++TGPNYSGKS + +++ H
Sbjct: 643 NGREGSPPNTSTQSLETSVEVAETQGPSMLLLTGPNYSGKS-----GSNCLYVPH----- 692
Query: 586 PADAATVGLTDSKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLL 645
QSSFMIDL Q+ L AT SL ++DEFGKGT + DG GL
Sbjct: 693 ---------------RETQSSFMIDLQQISFALNLATEHSLVIIDEFGKGTESTDGAGLA 737
Query: 646 GGTINYFVT-CDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IV 703
G Y ++ + PKVL TH E+ G LP + L F M V + + + +VE+ +
Sbjct: 738 CGLFEYLLSLGEKRPKVLAATHFHEIFENGFLPPRKELDFGYMEV-QVDPAAREVENQVT 796
Query: 704 FLYRLVPGHALLSYGLHCALLAGVPAEVIKRA 735
+LY G + S+G +CA L G+ +I RA
Sbjct: 797 YLYNFRSGRSNASFGTNCAALNGIDQAIISRA 828
>gi|406987479|gb|EKE07821.1| hypothetical protein ACD_17C00507G0001, partial [uncultured
bacterium]
Length = 761
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 162/566 (28%), Positives = 270/566 (47%), Gaps = 95/566 (16%)
Query: 205 SVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVK 264
S+ ++++ TPMG RLL ++ P+L E + R I+ F+ ++L +L + L +K
Sbjct: 205 SLIQLLDETSTPMGGRLLCHFVQYPLLSPEKIFERQEQIACFIRQQDLAKTLMKLLSQIK 264
Query: 265 DIPHIL----KKFNSPSFIYTASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFD 320
DI ++ K+ P +Y A +S+ + V K+ Q RL +FD
Sbjct: 265 DIERLIMKIAGKYAGPRDLY------ALGRSLTQIPEVKKLLP---------QERLGHFD 309
Query: 321 IVEKAASCITTELAYVYELVIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFL 380
+ K ++ ++ + + G + R+G+ ELD LR++ ++ ++
Sbjct: 310 DLSKR--------------ILSAMNDSPPLKAHEGEVFRDGYHQELDSLRKLAKDSMSWM 355
Query: 381 EEVASLELVQLPHLCKEMFVPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDG 440
+ QL HL +E + + ++GY + F +
Sbjct: 356 AQY------QL-HLREETGIKTL----KVGYT----------------RAFGYYIEVPRA 388
Query: 441 ETKRL--FYHTPKT-----RELDNLLGDIYHKILDME---RAITRDLVSH----ICLFSD 486
++ R+ +H +T R L L D H++L E +AI +L H I S
Sbjct: 389 QSGRIPDTFHRRQTLVNAERFLTQELKDFEHRVLTAEERSKAIELELFEHLRKEIAKESG 448
Query: 487 HLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRHVLQEMTVD--TFIPN 544
+ +A A++D L+L +A +N + RPI+ L+I GRH + E V +FI N
Sbjct: 449 PIHQAAKTIAKIDVMLALTTIAVRNQWTRPIVDHSDTLEIIGGRHPVIESHVGRASFIAN 508
Query: 545 DTRIDNDGRINIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTD-------- 596
DT + ++ +ITGPN +GKS YI+QVALI L+ +GS+VPA + +G+ D
Sbjct: 509 DTHLSPKQQLLLITGPNMAGKSTYIRQVALIAILAQMGSYVPATSTRMGIIDKIFSRIGA 568
Query: 597 SKHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLTEDGIGLLGGTINYFVTCD 656
S + QS+FM+++ + +L ATS+SL LLDE G+GT T DGI + Y +T
Sbjct: 569 SDDIARGQSTFMVEMSETANILNNATSRSLVLLDEIGRGTSTYDGISIAWAVAEYLLTTH 628
Query: 657 VP-PKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTDVED-IVFLYRLVPGHAL 714
K L TH EL RLK + + + +++ IVFL +++PG
Sbjct: 629 RKQAKTLFATHYWELT---------RLKNHFPNAANVQTAVKEIDSGIVFLRKIIPGGTD 679
Query: 715 LSYGLHCALLAGVPAEVIKRAAYVLE 740
SYG+H A LAG+P + I+RA +L+
Sbjct: 680 KSYGIHVAKLAGLPNQAIQRAEEMLK 705
>gi|419778317|ref|ZP_14304210.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
gi|383187332|gb|EIC79785.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
Length = 844
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 270/600 (45%), Gaps = 65/600 (10%)
Query: 161 IDSVIEVSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRR 220
+ VI + FL++D +L + + + G S+F ++++ T MG R
Sbjct: 238 LKPVIRYEIKDFLQMDYATKASLDLVENARSGKKQG--------SLFWLLDETKTAMGMR 289
Query: 221 LLRNWFLRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIY 280
LLR+W RP++D E + R + FL + L ++LK V DI + + SF
Sbjct: 290 LLRSWIHRPLIDKERIIQRQEVVQVFLDHFFERSDLTDSLKGVYDIERLASRV---SFGK 346
Query: 281 T-ASDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYEL 339
T D ++ S+ + I E G+ + L + D + + S I+ +A
Sbjct: 347 TNPKDLLQLATTLSSVPRIRAILE-GMEQPALGYL-IAQLDAIPELESLISAAIAPEAPH 404
Query: 340 VIGIIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMF 399
VI G ++R GF + LD+ R++ E ++ E+ + E +
Sbjct: 405 VIT-----------EGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKE-----RENSGIS 448
Query: 400 VPCIVYIHQIGYLMCIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLL 459
I Y + GY + +L + + S+ G T EL +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERFG-----------TEELARIE 497
Query: 460 GDIYH---KILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRP 516
GD+ K ++E I + + + L A +D SLA+VA + +RP
Sbjct: 498 GDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVLQSLAVVAETQHLIRP 557
Query: 517 ILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQVAL 574
+ +DIQ GRH + E M T+IPN ++ D I +ITGPN SGKS Y++Q+A+
Sbjct: 558 EFGEDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAM 617
Query: 575 IVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQSL 626
++ +GS+VPA++A + + D + + + QS+FM+++ + + AT SL
Sbjct: 618 TAVMAQLGSYVPAESAHLPIFDAIFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSL 677
Query: 627 CLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLN-EGCLPKSERLKFY 685
L DE G+GT T DG+ L I Y + + K L TH EL + E L +
Sbjct: 678 ILFDELGRGTATYDGMALAQSIIEY-IHEHIGAKTLFATHYHELTSLESSLEHLVNVHVA 736
Query: 686 TMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNN 745
T+ E N + FL+++ PG A SYG+H A +AG+P E++ RA +L +N
Sbjct: 737 TL-----EQNG----QVTFLHKIEPGPADKSYGIHVAKIAGLPEELLARADKILTQLENQ 787
>gi|339319886|ref|YP_004679581.1| DNA mismatch repair protein [Candidatus Midichloria mitochondrii
IricVA]
gi|338226011|gb|AEI88895.1| DNA mismatch repair protein [Candidatus Midichloria mitochondrii
IricVA]
Length = 818
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 278/597 (46%), Gaps = 78/597 (13%)
Query: 167 VSLNKFLKLDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWF 226
++ ++FL +DA + L+I + +G + S+ +++K VT G RLL
Sbjct: 273 INQDEFLLIDAKTRKHLEI-----EKNTLG----SKNNSLLEVLDKTVTATGGRLLSRQL 323
Query: 227 LRPILDLENLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNS----PSFIYTA 282
P++D + +N RLNA+ F +EEL +L + + D+ L + S P +
Sbjct: 324 NFPLIDEKTINQRLNAVEVFFNNEELRVALRKIMSNFPDVERALSRIYSRRCAPKDLNAV 383
Query: 283 SDWTAFLKSICSLLHVNKIFEVGISESLREQLRLLNFDIVEKAASCITTELAYVYELVIG 342
+ I LL NK ES QL L + D++++ + EL
Sbjct: 384 KEGLFVSNQIAELLQYNKEDLNDYLESQLPQLALFH-DLIDQLKEALNPELPA------- 435
Query: 343 IIDVNRSKEKGYGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPC 402
K+ GY +R G+ +LD L + +++ LC +
Sbjct: 436 -----NIKDGGY---IRSGYSPQLDNLINFKNNIN-----------LKIGELCDQYRFET 476
Query: 403 ------IVYIHQIGYLMCIFEEKLDDTTLE--QLQGFEFAFSDMDGETKRLFYHTPKTRE 454
I + IGY + + T+L ++ +F G R Y T ++
Sbjct: 477 RINNLKIQRNNVIGYFVEV-------TSLNNNKINSEKFIHRQSLGNVTR--YITEDLKK 527
Query: 455 LDNLLGDIYHKILDMERAITRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYM 514
L++ L + L +E +I +L I +D ++ + A LD S+A +A QNNY+
Sbjct: 528 LESELLVCDERALQLETSIFEELCELIIAKADSIVLSAVTIARLDFLASMAELAKQNNYV 587
Query: 515 RPILTLEPLLDIQNGRHVLQE--MTVDTFIPNDTRIDNDGRINIITGPNYSGKSIYIKQV 572
+PI+ I+ GRH + E M F ND +D++ ++TGPN +GKS +++Q
Sbjct: 588 KPIVDSGENFIIKGGRHPVVELLMPKGEFTTNDCALDSNNNFWLMTGPNMAGKSTFLRQN 647
Query: 573 ALIVFLSHIGSFVPADAATVGLTD--------SKHMTAEQSSFMIDLHQVGMMLRQATSQ 624
A++ ++ IGSFVPAD A +G+ D ++ + QS+FM+++ + +L AT
Sbjct: 648 AVVAIMAQIGSFVPADEAHIGIVDKIFSRIGSGDNIASGQSTFMVEMLETAYILNNATKN 707
Query: 625 SLCLLDEFGKGTLTEDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKS-ERLK 683
SL +LDE G+GT T DG+ + I Y + KVL TH EL L ++ RL+
Sbjct: 708 SLVILDEIGRGTSTYDGLSIAWSVIEYLHNTN-QSKVLFATHYHEL---NSLEETLSRLQ 763
Query: 684 FYTMSVLRPENNSTDVEDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLE 740
Y M V + + VFL+++ G A SYG+H A L+G+P EVIKRA +L+
Sbjct: 764 CYNMLVQEWDGKT------VFLHKVAKGRANKSYGIHVAELSGMPKEVIKRAYEILQ 814
>gi|427722904|ref|YP_007070181.1| DNA mismatch repair protein MutS [Leptolyngbya sp. PCC 7376]
gi|427354624|gb|AFY37347.1| DNA mismatch repair protein MutS [Leptolyngbya sp. PCC 7376]
Length = 885
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 187/688 (27%), Positives = 309/688 (44%), Gaps = 90/688 (13%)
Query: 119 NSMMDMGSE---VQVRASGGLLAVLENERIVDTLEQKESGNA-SITIDSVIEVSLNKFLK 174
+S+ MG E + VRA+GGLL+ +E E+ A + +++ S+N+FL+
Sbjct: 259 SSLEGMGCEKLPLAVRAAGGLLSYVE-----------ETQQAYKVPFETLKTYSINEFLQ 307
Query: 175 LDATAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLE 234
LD L+I QT + S G S+ ++ T MG R LR W L+P+LD E
Sbjct: 308 LDHQTRRNLEITQTIRDGSLYG--------SLLWALDVTNTNMGGRALRRWLLQPLLDPE 359
Query: 235 NLNSRLNAISFFLCSEELMASLHETLKYVKDIPHILKKFNSPSFIYTASDWTAFLKSICS 294
+ R + I + + L + LK + D+ I + S S A D A +S+
Sbjct: 360 AIAERFDTIEELVENTNLRQDVRHVLKQIYDLERIAGRIGSGSA--NARDLYALAESLTK 417
Query: 295 LLHVNKIFEVGISESLREQLRLLNFDI-VEKAASCITTELAYVYELVIGIIDVNRSKEKG 353
L ++ +I E S L+ + NF ++K + T L V I I D
Sbjct: 418 LSYLAEIVEDAKSPYLQA---VQNFPPDLDKLGKHVLTYL--VDSPPIHIKD-------- 464
Query: 354 YGTLVREGFCDELDELRQIYEELPEFLEEVASLELVQLPHLCKEMFVPCIVYIHQIGYLM 413
G ++R+G +ELD LR+ E E+L A+LE+ + + Y GY +
Sbjct: 465 -GGIIRDGVDEELDHLRRSQVEDREWL---ANLEITERERTGVSKLK--VGYNKTFGYYI 518
Query: 414 CIFEEKLDDTTLEQLQGFEFAFSDMDGETKRLFYHTPKTRELDNLLGDIYHKILDMERAI 473
+ + E L+ + + Y TP+ +E ++ + I +E I
Sbjct: 519 SMPRSQSAQAPEEYLRKQTLSNEER--------YITPELKERESRILTAKDDICKLEYEI 570
Query: 474 TRDLVSHICLFSDHLLKAVNFAAELDCFLSLALVAHQNNYMRPILTLEPLLDIQNGRH-- 531
+L + +D + A A +D + A +Y RP++ L+I+ GRH
Sbjct: 571 FTELRGTVAEHTDTIRAAAGAIAAIDVLAAFVETAVYQDYCRPVIGSTKNLEIEQGRHPV 630
Query: 532 VLQEMTVDTFIPNDTRIDNDGRIN-----IITGPNYSGKSIYIKQVALIVFLSHIGSFVP 586
V + + + F+ N T + I I+TGPN SGKS Y++Q LI ++ +GSF+P
Sbjct: 631 VEKSLGMGLFVSNSTNLGKAKNIKNPDLIILTGPNASGKSCYLRQTGLIQLMAQVGSFIP 690
Query: 587 ADAATVGLTDS--------KHMTAEQSSFMIDLHQVGMMLRQATSQSLCLLDEFGKGTLT 638
A +AT+ + D + QS+FM+++++ +L AT +SL LLDE G+GT T
Sbjct: 691 AKSATIPICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATEKSLILLDEIGRGTAT 750
Query: 639 EDGIGLLGGTINYFVTCDVPPKVLVCTHLTELLNEGCLPKSERLKFYTMSVLRPENNSTD 698
DG+ + + T +V K + TH E LNE + +L N
Sbjct: 751 FDGLSIAWAVAEHIAT-EVKAKTIFATHYHE-LNE-----------LSSILLNVSNFQVT 797
Query: 699 V----EDIVFLYRLVPGHALLSYGLHCALLAGVPAEVIKRAAYVLEAAQNNKHVERWSHE 754
V E+I+FL+++ PG A SYG+ LAG+P VI RA V+ + + + +
Sbjct: 798 VKELPEEIIFLHKVQPGGADKSYGIEAGRLAGLPTSVITRAKQVMTQIEKHSKIAVGLRK 857
Query: 755 NISAQDQQYKNAVEKMLAFDVLKGDLRL 782
+ +++ N +DV K +L
Sbjct: 858 GVRTKEKMASNG-----KYDVNKASEQL 880
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,987,439,051
Number of Sequences: 23463169
Number of extensions: 503319690
Number of successful extensions: 1253524
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7146
Number of HSP's successfully gapped in prelim test: 2844
Number of HSP's that attempted gapping in prelim test: 1213713
Number of HSP's gapped (non-prelim): 17606
length of query: 792
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 641
effective length of database: 8,816,256,848
effective search space: 5651220639568
effective search space used: 5651220639568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)