BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043126
MPTPKYYLSASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTS
DLPPMSC

High Scoring Gene Products

Symbol, full name Information P value
COPT1
AT5G59030
protein from Arabidopsis thaliana 2.4e-12
COPT2
AT3G46900
protein from Arabidopsis thaliana 1.7e-11
COPT3
AT5G59040
protein from Arabidopsis thaliana 5.9e-09
COPT6
AT2G26975
protein from Arabidopsis thaliana 9.7e-09
COPT2
Copper transporter 2
protein from Oryza sativa Japonica Group 4.2e-08
COPT1
Copper transporter 1
protein from Oryza sativa Japonica Group 1.8e-07
COPT4
AT2G37925
protein from Arabidopsis thaliana 4.8e-07
COPT5
AT5G20650
protein from Arabidopsis thaliana 1.1e-05
PF14_0369
hypothetical protein
gene from Plasmodium falciparum 2.6e-05
PF14_0369
Copper transporter putative
protein from Plasmodium falciparum 3D7 2.6e-05
DDB_G0285545
Ctr copper transporter family protein
gene from Dictyostelium discoideum 8.1e-05
F1NFX8
Uncharacterized protein
protein from Gallus gallus 0.00087

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043126
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2153306 - symbol:COPT1 "copper transporter 1" ...   165  2.4e-12   1
TAIR|locus:2102752 - symbol:COPT2 "copper transporter 2" ...   157  1.7e-11   1
TAIR|locus:2153311 - symbol:COPT3 "copper transporter 3" ...   133  5.9e-09   1
TAIR|locus:504955951 - symbol:COPT6 "copper transporter 6...   131  9.7e-09   1
UNIPROTKB|Q60EN8 - symbol:COPT2 "Copper transporter 2" sp...   125  4.2e-08   1
UNIPROTKB|Q94EE4 - symbol:COPT1 "Copper transporter 1" sp...   119  1.8e-07   1
TAIR|locus:504955905 - symbol:COPT4 "copper transporter 4...   115  4.8e-07   1
TAIR|locus:2180474 - symbol:COPT5 "copper transporter 5" ...   102  1.1e-05   1
GENEDB_PFALCIPARUM|PF14_0369 - symbol:PF14_0369 "hypothet...   103  2.6e-05   1
UNIPROTKB|Q8IL79 - symbol:PF14_0369 "Copper transporter p...   103  2.6e-05   1
DICTYBASE|DDB_G0285545 - symbol:DDB_G0285545 "Ctr copper ...    94  8.1e-05   1
UNIPROTKB|F1NFX8 - symbol:F1NFX8 "Uncharacterized protein...    87  0.00087   1


>TAIR|locus:2153306 [details] [associations]
            symbol:COPT1 "copper transporter 1" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;IGI;ISS] [GO:0006825 "copper ion
            transport" evidence=IGI;ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
            evidence=IMP] [GO:0048364 "root development" evidence=IMP]
            [GO:0016020 "membrane" evidence=ISS] InterPro:IPR007274
            Pfam:PF04145 GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0016020 GO:GO:0048364 GO:GO:0048235 GO:GO:0005375 EMBL:Z49859
            EMBL:AB024027 EMBL:AY091090 EMBL:AY123038 EMBL:AF466373
            EMBL:AK226835 IPI:IPI00543228 PIR:T48875 RefSeq:NP_200711.1
            UniGene:At.9700 STRING:Q39065 TCDB:1.A.56.1.1 PaxDb:Q39065
            PRIDE:Q39065 EnsemblPlants:AT5G59030.1 GeneID:836020
            KEGG:ath:AT5G59030 TAIR:At5g59030 eggNOG:NOG300540
            HOGENOM:HOG000195393 InParanoid:Q39065 KO:K14686 OMA:TEWLAHS
            PhylomeDB:Q39065 ProtClustDB:CLSN2685139 Genevestigator:Q39065
            GermOnline:AT5G59030 PANTHER:PTHR12483 Uniprot:Q39065
        Length = 170

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 30/55 (54%), Positives = 39/55 (70%)

Query:    13 VAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLPPMSC 67
             +   +LVMLA+MSFN GVFLVA+AGH  GF +FGS+ F  +S   KT+ +PP  C
Sbjct:   114 IGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRKTNYVPPSGC 168


>TAIR|locus:2102752 [details] [associations]
            symbol:COPT2 "copper transporter 2" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
            transporter activity" evidence=IGI] [GO:0015678 "high-affinity
            copper ion transport" evidence=IGI] [GO:0046658 "anchored to plasma
            membrane" evidence=IDA] InterPro:IPR007274 Pfam:PF04145
            GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046658
            EMBL:AL096859 HOGENOM:HOG000195393 ProtClustDB:CLSN2685139
            PANTHER:PTHR12483 OMA:YALCLIV EMBL:AF466370 EMBL:BT009708
            IPI:IPI00525977 PIR:T12958 RefSeq:NP_190274.1 UniGene:At.37005
            STRING:Q9STG2 PaxDb:Q9STG2 PRIDE:Q9STG2 EnsemblPlants:AT3G46900.1
            GeneID:823843 KEGG:ath:AT3G46900 TAIR:At3g46900 eggNOG:NOG279049
            InParanoid:Q9STG2 PhylomeDB:Q9STG2 Genevestigator:Q9STG2
            GO:GO:0015089 GO:GO:0015678 Uniprot:Q9STG2
        Length = 158

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query:    17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDL-PPMS 66
             +LVMLA+MSFN GVF+VA+AG+  GFF+FGS  F K S   KT++L PP S
Sbjct:   104 YLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154


>TAIR|locus:2153311 [details] [associations]
            symbol:COPT3 "copper transporter 3" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
            transporter activity" evidence=IGI] InterPro:IPR007274 Pfam:PF04145
            GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB024027
            HOGENOM:HOG000195393 PANTHER:PTHR12483 GO:GO:0015089 EMBL:DQ447093
            EMBL:AY087351 EMBL:AF466371 IPI:IPI00528893 RefSeq:NP_200712.1
            UniGene:At.37004 STRING:Q9FGU8 PRIDE:Q9FGU8
            EnsemblPlants:AT5G59040.1 GeneID:836021 KEGG:ath:AT5G59040
            TAIR:At5g59040 eggNOG:NOG312615 InParanoid:Q9FGU8 OMA:NSHTEVQ
            PhylomeDB:Q9FGU8 ProtClustDB:CLSN2914852 Genevestigator:Q9FGU8
            Uniprot:Q9FGU8
        Length = 151

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 26/41 (63%), Positives = 31/41 (75%)

Query:    14 AAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSS 54
             A  +LVMLA+MSFNGGVF+ A+AG   GF IFGSR F  +S
Sbjct:   100 ALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATS 140


>TAIR|locus:504955951 [details] [associations]
            symbol:COPT6 "copper transporter 6" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
            InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021 GO:GO:0005773
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005623 GO:GO:0005375
            HOGENOM:HOG000195393 ProtClustDB:CLSN2685139 PANTHER:PTHR12483
            EMBL:AK118724 EMBL:BT004940 IPI:IPI00531722 RefSeq:NP_850091.1
            UniGene:At.44738 IntAct:Q8GWP3 PaxDb:Q8GWP3 PRIDE:Q8GWP3
            EnsemblPlants:AT2G26975.1 GeneID:817239 KEGG:ath:AT2G26975
            TAIR:At2g26975 eggNOG:NOG270490 InParanoid:Q8GWP3 OMA:WLAHSSI
            PhylomeDB:Q8GWP3 Genevestigator:Q8GWP3 Uniprot:Q8GWP3
        Length = 145

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 25/42 (59%), Positives = 30/42 (71%)

Query:    17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPK 58
             +LVMLA+MSFNGGVF+VA+AG   GF +FGS  F   S   K
Sbjct:    99 YLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDEK 140


>UNIPROTKB|Q60EN8 [details] [associations]
            symbol:COPT2 "Copper transporter 2" species:39947 "Oryza
            sativa Japonica Group" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006825
            "copper ion transport" evidence=IMP] [GO:0043621 "protein
            self-association" evidence=IDA] [GO:0051119 "sugar transmembrane
            transporter activity" evidence=ISS] InterPro:IPR007274 Pfam:PF04145
            GO:GO:0005887 GO:GO:0006952 GO:GO:0043621 EMBL:AP008211
            GO:GO:0005375 PANTHER:PTHR12483 ProtClustDB:CLSN2691893
            GO:GO:0051119 EMBL:AC109595 EMBL:AK107848 RefSeq:NP_001055594.1
            UniGene:Os.31094 EnsemblPlants:LOC_Os05g35050.1 GeneID:4338846
            KEGG:osa:4338846 Gramene:Q60EN8 eggNOG:KOG3386 Uniprot:Q60EN8
        Length = 151

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/60 (45%), Positives = 33/60 (55%)

Query:    10 ASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLP--PMSC 67
             A  V   +L+MLA+MSFNGGVFL  VAGH  GF  F + +      PP   D    P+ C
Sbjct:    92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGPAPPLEEDRKNDPVCC 151


>UNIPROTKB|Q94EE4 [details] [associations]
            symbol:COPT1 "Copper transporter 1" species:39947 "Oryza
            sativa Japonica Group" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006825
            "copper ion transport" evidence=IMP] [GO:0043621 "protein
            self-association" evidence=IDA] [GO:0051119 "sugar transmembrane
            transporter activity" evidence=ISS] InterPro:IPR007274 Pfam:PF04145
            GO:GO:0005887 GO:GO:0006952 GO:GO:0043621 EMBL:AP008207
            GO:GO:0005375 PANTHER:PTHR12483 EMBL:AP003106 RefSeq:NP_001044379.2
            UniGene:Os.42024 EnsemblPlants:LOC_Os01g56420.1 GeneID:4324610
            KEGG:dosa:Os01t0770700-00 KEGG:osa:4324610 Gramene:Q94EE4
            eggNOG:NOG254440 OMA:YALCLIV ProtClustDB:CLSN2691893 GO:GO:0051119
            Uniprot:Q94EE4
        Length = 161

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 23/33 (69%), Positives = 26/33 (78%)

Query:    13 VAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIF 45
             V   +L+MLA+MSFNGGVFLVAVAGH  GF  F
Sbjct:   107 VGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF 139


>TAIR|locus:504955905 [details] [associations]
            symbol:COPT4 "copper transporter 4" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
            transporter activity" evidence=IGI] InterPro:IPR007274 Pfam:PF04145
            GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000195393 PANTHER:PTHR12483 GO:GO:0015089 eggNOG:KOG3386
            EMBL:AF466372 IPI:IPI00520705 RefSeq:NP_850289.1 UniGene:At.37003
            PRIDE:Q8SAA5 EnsemblPlants:AT2G37925.1 GeneID:818369
            KEGG:ath:AT2G37925 TAIR:At2g37925 InParanoid:Q8SAA5 OMA:AFFWGHR
            PhylomeDB:Q8SAA5 Genevestigator:Q8SAA5 Uniprot:Q8SAA5
        Length = 145

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query:    13 VAAGF--LVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVF 50
             V +GF  LV+LA++SFNGGVFL A+ GH  GF +F  R F
Sbjct:   100 VKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAF 139


>TAIR|locus:2180474 [details] [associations]
            symbol:COPT5 "copper transporter 5" species:3702
            "Arabidopsis thaliana" [GO:0005375 "copper ion transmembrane
            transporter activity" evidence=IEA;ISS] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0035434 "copper ion transmembrane transport"
            evidence=IEA] [GO:0015089 "high affinity copper ion transmembrane
            transporter activity" evidence=IGI] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
            [GO:0005770 "late endosome" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0015680 "intracellular copper ion transport"
            evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021 GO:GO:0009506
            GO:GO:0009737 GO:GO:0005794 GO:GO:0005774 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005770 GO:GO:0015680 EMBL:AF296832
            HOGENOM:HOG000195393 KO:K14686 PANTHER:PTHR12483 GO:GO:0015089
            EMBL:AY039578 EMBL:AY054124 EMBL:AY086915 EMBL:AF466374
            IPI:IPI00521782 RefSeq:NP_197565.1 UniGene:At.24711
            UniGene:At.72357 STRING:Q93VM8 PaxDb:Q93VM8 PRIDE:Q93VM8
            EnsemblPlants:AT5G20650.1 GeneID:832188 KEGG:ath:AT5G20650
            TAIR:At5g20650 eggNOG:NOG313752 InParanoid:Q93VM8 OMA:FSAFYQY
            PhylomeDB:Q93VM8 ProtClustDB:CLSN2687384 Genevestigator:Q93VM8
            Uniprot:Q93VM8
        Length = 146

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query:    12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGS 47
             + A G+L+MLA MSFNGGVF+  V G T G+ +F S
Sbjct:    95 NAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRS 130


>GENEDB_PFALCIPARUM|PF14_0369 [details] [associations]
            symbol:PF14_0369 "hypothetical protein"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=RCA] InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021
            EMBL:AE014187 GO:GO:0005375 KO:K14686 PANTHER:PTHR12483
            RefSeq:XP_001348543.1 ProteinModelPortal:Q8IL79 PRIDE:Q8IL79
            EnsemblProtists:PF14_0369:mRNA GeneID:811951 KEGG:pfa:PF14_0369
            EuPathDB:PlasmoDB:PF3D7_1439000 HOGENOM:HOG000282166
            ProtClustDB:CLSZ2433244 Uniprot:Q8IL79
        Length = 235

 Score = 103 (41.3 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query:    17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDL 62
             +L+ML +M+FN G+F+  V G +FGFFIFG++  +     P   D+
Sbjct:   177 YLLMLIVMTFNVGLFVAVVLGLSFGFFIFGNKFVSSKKCSPDDLDV 222


>UNIPROTKB|Q8IL79 [details] [associations]
            symbol:PF14_0369 "Copper transporter putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
            evidence=RCA] InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021
            EMBL:AE014187 GO:GO:0005375 KO:K14686 PANTHER:PTHR12483
            RefSeq:XP_001348543.1 ProteinModelPortal:Q8IL79 PRIDE:Q8IL79
            EnsemblProtists:PF14_0369:mRNA GeneID:811951 KEGG:pfa:PF14_0369
            EuPathDB:PlasmoDB:PF3D7_1439000 HOGENOM:HOG000282166
            ProtClustDB:CLSZ2433244 Uniprot:Q8IL79
        Length = 235

 Score = 103 (41.3 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query:    17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDL 62
             +L+ML +M+FN G+F+  V G +FGFFIFG++  +     P   D+
Sbjct:   177 YLLMLIVMTFNVGLFVAVVLGLSFGFFIFGNKFVSSKKCSPDDLDV 222


>DICTYBASE|DDB_G0285545 [details] [associations]
            symbol:DDB_G0285545 "Ctr copper transporter family
            protein" species:44689 "Dictyostelium discoideum" [GO:0035434
            "copper ion transmembrane transport" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0005375 "copper ion
            transmembrane transporter activity" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR007274 Pfam:PF04145
            dictyBase:DDB_G0285545 GO:GO:0016021 EMBL:AAFI02000079
            GO:GO:0005375 KO:K14686 PANTHER:PTHR12483 eggNOG:NOG279049
            RefSeq:XP_638116.1 EnsemblProtists:DDB0186559 GeneID:8625164
            KEGG:ddi:DDB_G0285545 InParanoid:Q54N27 OMA:SHLWKTI
            ProtClustDB:CLSZ2846711 Uniprot:Q54N27
        Length = 146

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query:    17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKS 53
             + +ML  MSFNGG+ +  V G   GF++FG + F+KS
Sbjct:   101 YTIMLIFMSFNGGICISCVLGIGVGFYLFGQKRFSKS 137


>UNIPROTKB|F1NFX8 [details] [associations]
            symbol:F1NFX8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005375 "copper ion transmembrane transporter
            activity" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR007274 Pfam:PF04145 GO:GO:0016021
            GO:GO:0005375 PANTHER:PTHR12483 GeneTree:ENSGT00530000063415
            OMA:FQMHFIF EMBL:AADN02026893 IPI:IPI00586198
            Ensembl:ENSGALT00000019709 Uniprot:F1NFX8
        Length = 183

 Score = 87 (35.7 bits), Expect = 0.00087, P = 0.00087
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query:     8 LSASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFI 44
             L    V  G+ +MLA+MS+N  +FL  VAG   G+F+
Sbjct:   147 LHVVQVVVGYTLMLAVMSYNAWIFLGVVAGSALGYFV 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.140   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 22  0.38    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  12
  No. of states in DFA:  400 (43 KB)
  Total size of DFA:  72 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.37u 0.17s 8.54t   Elapsed:  00:00:00
  Total cpu time:  8.37u 0.17s 8.54t   Elapsed:  00:00:00
  Start:  Mon May 20 15:41:58 2013   End:  Mon May 20 15:41:58 2013

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