BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043126
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2
Length = 170
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLPPMSC 67
+ +LVMLA+MSFN GVFLVA+AGH GF +FGS+ F +S KT+ +PP C
Sbjct: 113 RIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSDDRKTNYVPPSGC 168
>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1
Length = 158
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLPP 64
+LVMLA+MSFN GVF+VA+AG+ GFF+FGS F K S KT++L P
Sbjct: 104 YLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAELLP 151
>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1
Length = 151
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MPTPKYYLSASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTS 60
+ T Y + A A +LVMLA+MSFNGGVF+ A+AG GF IFGSR F +S T
Sbjct: 90 LQTAVYTVRA---ALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146
>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
Length = 145
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%)
Query: 17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPK 58
+LVMLA+MSFNGGVF+VA+AG GF +FGS F S K
Sbjct: 99 YLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDEK 140
>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1
SV=1
Length = 151
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 10 ASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLP--PMSC 67
A V +L+MLA+MSFNGGVFL VAGH GF F + + PP D P+ C
Sbjct: 92 AVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGGPAPPLEEDRKNDPVCC 151
>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2
SV=1
Length = 161
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLPPMSC 67
V +L+MLA+MSFNGGVFLVAVAGH GF F + + + + P C
Sbjct: 106 RVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAFRAGLCGGPAQVEEDRKNDPACC 161
>sp|Q7XTF8|COPT6_ORYSJ Copper transporter 6 OS=Oryza sativa subsp. japonica GN=COPT6 PE=2
SV=1
Length = 184
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 10 ASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRV 49
A+ + +LVMLA+MSFN GV L AVAGH GF + SRV
Sbjct: 119 AARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV 158
>sp|Q10KT6|COPT4_ORYSJ Copper transporter 4 OS=Oryza sativa subsp. japonica GN=COPT4 PE=2
SV=1
Length = 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 10 ASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPK 58
A+ + +LVMLA+MSFN GV L AVAGH GF + S + + P+
Sbjct: 110 AARMGLAYLVMLAVMSFNAGVLLAAVAGHAAGFLLARSGLLGSRAAAPE 158
>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2
Length = 145
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 17 FLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSS 54
+LV+LA++SFNGGVFL A+ GH GF +F R F
Sbjct: 106 YLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNRD 143
>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1
Length = 146
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGS 47
+ A G+L+MLA MSFNGGVF+ V G T G+ +F S
Sbjct: 95 NAAIGYLLMLAAMSFNGGVFIAIVVGLTAGYAVFRS 130
>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica
GN=COPT5.2 PE=3 SV=1
Length = 176
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 16 GFLVMLAIMSFNGGVFLVAVAGHTFGFFIF 45
G+L+MLA+MSFNGGVFL VAG G F
Sbjct: 124 GYLLMLAVMSFNGGVFLAVVAGLAAGHLAF 153
>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2 OS=Mus musculus
GN=Slc31a2 PE=1 SV=1
Length = 143
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFI 44
V G+ VMLA+MS+N +FL V G G+++
Sbjct: 103 QVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2 OS=Homo sapiens
GN=SLC31A2 PE=1 SV=1
Length = 143
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 12 HVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFI 44
V G+ +MLA+MS+N +FL V G G+++
Sbjct: 103 QVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|Q9P7F9|CTR5_SCHPO Copper transport protein ctr5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ctr5 PE=1 SV=1
Length = 173
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 4 PKYYLSASHVAAGFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVF 50
+YLSA+ ++ML +MSFNG L G GFF+F S +
Sbjct: 120 SSFYLSAT------ILMLIVMSFNGYAILFGFVGAWIGFFLFASDTY 160
>sp|Q5ZD08|COPT3_ORYSJ Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2
SV=1
Length = 150
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 23 IMSFNGGVFLVAVAGHTFGFFIFGSRVFNKSSPPPKTSDLPPMSC 67
+MSFN GV L AVAGH GF F + + K +L P +C
Sbjct: 108 LMSFNVGVLLAAVAGHAAGFLAFRAGL---CGGGYKKGELAPAAC 149
>sp|O94722|CTR4_SCHPO Copper transport protein ctr4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ctr4 PE=1 SV=1
Length = 289
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 16 GFLVMLAIMSFNGGVFLVAVAGHTFGFFIFGSRVFN-KSSPPPKTSDL 62
++ ML M +NG V L G FG+F+FG+ + K+S +T +
Sbjct: 219 AYIAMLLAMYYNGYVILFLFCGTFFGYFLFGADTISTKASSSVQTKTI 266
>sp|Q8MXY0|AMT3_DICDI Ammonium transporter 3 OS=Dictyostelium discoideum GN=amtC PE=2
SV=1
Length = 431
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 16 GFLVMLAIMSFNGGVFLVAVAGHT--FGFFIFGSRV--FNKSSPPPKTSDLPPMS 66
G+L L I+ F GG + VAG T G F+ G R+ FN+ S PK +LP S
Sbjct: 159 GWLFDLGIVDFAGGAVIHIVAGITGACGSFLLGPRIGRFNQESGKPK--NLPGHS 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,918,981
Number of Sequences: 539616
Number of extensions: 765231
Number of successful extensions: 2335
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2317
Number of HSP's gapped (non-prelim): 19
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)