Query 043128
Match_columns 371
No_of_seqs 480 out of 2894
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 23:11:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 8.4E-26 2.9E-30 197.6 18.5 127 60-187 31-161 (169)
2 4gpm_A Engineered protein OR26 99.9 1.3E-24 4.3E-29 190.0 16.3 121 68-189 6-130 (169)
3 1d9s_A Cyclin-dependent kinase 99.9 2E-24 6.8E-29 180.5 10.3 126 59-186 5-135 (136)
4 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.1E-23 1.7E-27 178.1 18.6 124 61-185 42-169 (169)
5 2rfa_A Transient receptor pote 99.9 2.1E-23 7.2E-28 188.7 16.8 128 59-187 30-183 (232)
6 3v31_A Ankyrin repeat family A 99.9 3.1E-23 1E-27 178.6 16.4 127 59-186 29-159 (167)
7 2rfm_A Putative ankyrin repeat 99.9 8.6E-24 2.9E-28 186.4 13.0 129 60-189 29-161 (192)
8 4b93_B Ankyrin repeat domain-c 99.9 7.8E-24 2.7E-28 198.2 12.8 130 59-189 79-212 (269)
9 1yyh_A HN1;, notch 1, ankyrin 99.9 4.9E-23 1.7E-27 189.7 17.8 110 63-173 87-201 (253)
10 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-23 5.2E-28 175.1 13.0 123 62-185 10-136 (136)
11 2f8y_A Notch homolog 1, transl 99.9 1.9E-22 6.4E-27 181.1 20.4 111 63-173 22-136 (223)
12 1awc_B Protein (GA binding pro 99.9 1.2E-22 4E-27 172.8 17.8 118 62-180 30-151 (153)
13 3hra_A Ankyrin repeat family p 99.9 9.9E-23 3.4E-27 180.0 18.0 131 58-188 31-171 (201)
14 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.2E-23 1.4E-27 176.4 14.8 125 60-186 32-161 (162)
15 3v30_A DNA-binding protein rfx 99.9 4.3E-23 1.5E-27 178.5 15.0 129 59-188 29-161 (172)
16 2rfm_A Putative ankyrin repeat 99.9 3.4E-23 1.1E-27 182.6 14.3 125 60-185 62-190 (192)
17 3twr_A Tankyrase-2; ankyrin re 99.9 4E-23 1.4E-27 177.5 14.2 125 63-188 5-134 (165)
18 1awc_B Protein (GA binding pro 99.9 4.1E-23 1.4E-27 175.6 13.8 123 66-189 2-127 (153)
19 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.3E-23 2.5E-27 166.7 14.3 121 65-186 1-125 (126)
20 2f8y_A Notch homolog 1, transl 99.9 2.3E-22 7.9E-27 180.5 18.9 128 60-188 52-184 (223)
21 1oy3_D Transcription factor in 99.9 1E-22 3.6E-27 188.6 16.7 129 59-188 38-218 (282)
22 3v31_A Ankyrin repeat family A 99.9 5.6E-23 1.9E-27 176.9 13.8 124 65-189 2-129 (167)
23 3f6q_A Integrin-linked protein 99.9 3.9E-23 1.3E-27 180.3 12.8 130 59-189 32-165 (179)
24 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-22 4.1E-27 175.8 15.4 126 62-188 10-139 (169)
25 3aji_A 26S proteasome non-ATPa 99.9 3.3E-22 1.1E-26 180.5 18.2 143 59-202 33-192 (231)
26 3aji_A 26S proteasome non-ATPa 99.9 2.2E-22 7.6E-27 181.6 17.0 130 59-189 66-199 (231)
27 1oy3_D Transcription factor in 99.9 7E-23 2.4E-27 189.7 13.5 128 59-187 2-183 (282)
28 2etb_A Transient receptor pote 99.9 1.2E-22 4E-27 186.9 14.9 111 62-173 39-183 (256)
29 1bi7_B P16INK4A, MTS1, multipl 99.9 2.2E-23 7.6E-28 178.2 9.4 127 61-189 7-138 (156)
30 1yyh_A HN1;, notch 1, ankyrin 99.9 2.1E-22 7.1E-27 185.5 16.4 131 57-187 48-182 (253)
31 1s70_B 130 kDa myosin-binding 99.9 5.2E-22 1.8E-26 186.1 19.1 127 61-188 68-258 (299)
32 1wdy_A 2-5A-dependent ribonucl 99.9 1.2E-21 4.3E-26 180.8 21.4 121 63-184 36-170 (285)
33 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-22 4.2E-27 174.4 13.5 124 60-185 36-163 (165)
34 2dzn_A Probable 26S proteasome 99.9 7.9E-22 2.7E-26 177.4 19.2 128 57-185 27-163 (228)
35 3c5r_A BARD-1, BRCA1-associate 99.9 1.5E-23 5.2E-28 175.0 7.3 118 62-180 6-127 (137)
36 2xai_A ASB-9, ankyrin repeat a 99.9 1.8E-22 6E-27 187.0 14.9 119 65-185 2-124 (261)
37 3d9h_A CDNA FLJ77766, highly s 99.9 3.5E-22 1.2E-26 187.8 17.1 140 59-200 52-208 (285)
38 3aaa_C Myotrophin, protein V-1 99.9 1.7E-22 5.7E-27 165.7 13.0 108 62-170 3-114 (123)
39 3v30_A DNA-binding protein rfx 99.9 2.4E-22 8.3E-27 173.8 14.5 123 66-189 2-129 (172)
40 1k1a_A B-cell lymphoma 3-encod 99.9 3.5E-22 1.2E-26 181.0 15.7 171 9-202 11-203 (241)
41 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.2E-22 2.1E-26 168.2 16.3 122 59-183 29-154 (156)
42 3kea_A K1L; tropism, ANK repea 99.9 8.9E-23 3E-27 192.0 12.1 129 59-188 24-155 (285)
43 2dzn_A Probable 26S proteasome 99.9 5.1E-22 1.7E-26 178.6 16.6 127 62-189 68-202 (228)
44 3b7b_A Euchromatic histone-lys 99.9 1.1E-21 3.8E-26 177.7 18.8 128 60-188 5-137 (237)
45 3b7b_A Euchromatic histone-lys 99.9 1.5E-21 5.2E-26 176.8 19.6 127 61-187 39-169 (237)
46 2xai_A ASB-9, ankyrin repeat a 99.9 4.6E-22 1.6E-26 184.2 16.2 138 61-200 31-184 (261)
47 3ljn_A Hypothetical protein; a 99.9 7.6E-22 2.6E-26 190.9 18.4 182 60-248 47-272 (364)
48 1n11_A Ankyrin; clathrin, BAND 99.9 2.6E-21 8.8E-26 191.5 22.4 226 61-298 75-332 (437)
49 1n11_A Ankyrin; clathrin, BAND 99.9 6.5E-22 2.2E-26 195.8 18.1 120 62-182 10-133 (437)
50 3f6q_A Integrin-linked protein 99.9 4E-22 1.4E-26 173.8 14.6 123 65-188 4-131 (179)
51 1k1a_A B-cell lymphoma 3-encod 99.9 1.8E-21 6.3E-26 176.2 19.5 192 61-264 4-236 (241)
52 3hra_A Ankyrin repeat family p 99.9 1E-21 3.4E-26 173.5 17.2 126 60-185 66-201 (201)
53 1ikn_D Protein (I-kappa-B-alph 99.9 3.2E-22 1.1E-26 181.8 14.3 131 58-189 37-178 (236)
54 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.1E-22 7E-27 172.1 12.2 123 64-188 3-129 (162)
55 4hbd_A KN motif and ankyrin re 99.9 3.1E-22 1.1E-26 187.5 13.9 124 59-183 104-237 (276)
56 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.1E-22 1.8E-26 168.7 13.5 133 66-200 2-151 (156)
57 3jxi_A Vanilloid receptor-rela 99.9 1.9E-22 6.4E-27 185.8 11.3 111 63-174 43-188 (260)
58 2rfa_A Transient receptor pote 99.9 1.3E-21 4.4E-26 176.9 16.1 126 60-186 69-221 (232)
59 4b93_B Ankyrin repeat domain-c 99.9 4.2E-22 1.4E-26 186.4 12.8 113 60-173 113-229 (269)
60 3jxi_A Vanilloid receptor-rela 99.9 4.2E-22 1.4E-26 183.4 12.1 127 62-188 89-251 (260)
61 2etb_A Transient receptor pote 99.9 3.8E-22 1.3E-26 183.5 11.8 127 62-188 86-247 (256)
62 1ikn_D Protein (I-kappa-B-alph 99.9 4.7E-22 1.6E-26 180.7 12.2 129 60-189 72-211 (236)
63 2pnn_A Transient receptor pote 99.9 5.2E-22 1.8E-26 184.5 12.7 112 62-174 50-196 (273)
64 3utm_A Tankyrase-1; tankyrase, 99.9 5.6E-21 1.9E-25 181.9 20.2 111 59-170 51-165 (351)
65 3d9h_A CDNA FLJ77766, highly s 99.9 2.6E-21 8.8E-26 181.9 17.2 166 9-202 61-242 (285)
66 4g8k_A 2-5A-dependent ribonucl 99.9 5E-21 1.7E-25 183.2 19.1 144 59-202 118-293 (337)
67 2pnn_A Transient receptor pote 99.9 4.7E-22 1.6E-26 184.8 11.5 128 62-189 97-261 (273)
68 3eu9_A Huntingtin-interacting 99.9 1.5E-20 5.2E-25 169.3 20.7 124 61-185 37-166 (240)
69 1s70_B 130 kDa myosin-binding 99.9 6.5E-22 2.2E-26 185.4 12.0 118 62-180 36-157 (299)
70 1wdy_A 2-5A-dependent ribonucl 99.9 1.1E-20 3.6E-25 174.5 19.8 138 62-200 68-237 (285)
71 3utm_A Tankyrase-1; tankyrase, 99.9 8.1E-21 2.8E-25 180.8 19.2 142 60-202 85-300 (351)
72 2vge_A RELA-associated inhibit 99.9 4.4E-22 1.5E-26 181.8 9.4 133 55-188 10-149 (229)
73 3ehr_A Osteoclast-stimulating 99.9 2.3E-22 8E-27 181.4 7.3 126 63-188 70-199 (222)
74 1sw6_A Regulatory protein SWI6 99.9 5.7E-22 1.9E-26 190.2 10.3 139 62-200 127-301 (327)
75 4hbd_A KN motif and ankyrin re 99.9 2.7E-21 9.2E-26 181.2 14.2 127 58-185 137-273 (276)
76 3deo_A Signal recognition part 99.9 5.1E-22 1.8E-26 174.3 8.6 111 63-175 41-156 (183)
77 3ljn_A Hypothetical protein; a 99.9 3.3E-21 1.1E-25 186.4 15.1 126 62-188 134-270 (364)
78 3kea_A K1L; tropism, ANK repea 99.8 5.6E-21 1.9E-25 179.7 14.2 134 65-200 61-213 (285)
79 3t8k_A Uncharacterized protein 99.8 3.6E-22 1.2E-26 177.0 5.6 121 64-184 36-176 (186)
80 2fo1_E LIN-12 protein; beta-ba 99.8 7.6E-21 2.6E-25 185.5 14.7 126 61-186 230-370 (373)
81 3t8k_A Uncharacterized protein 99.8 6.1E-22 2.1E-26 175.6 6.1 135 66-200 6-172 (186)
82 3ui2_A Signal recognition part 99.8 2.5E-21 8.5E-26 178.2 10.2 110 63-174 42-156 (244)
83 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.3E-21 8E-26 177.4 9.3 123 65-188 4-129 (239)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.8 5.1E-21 1.7E-25 175.1 11.1 123 64-187 35-164 (239)
85 2fo1_E LIN-12 protein; beta-ba 99.8 2.2E-20 7.4E-25 182.3 14.7 141 59-200 159-331 (373)
86 4g8k_A 2-5A-dependent ribonucl 99.8 1.3E-19 4.3E-24 173.4 18.5 117 64-181 23-144 (337)
87 3eu9_A Huntingtin-interacting 99.8 5.5E-20 1.9E-24 165.6 15.1 108 65-173 75-188 (240)
88 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.7E-20 3.3E-24 141.9 12.0 89 65-154 1-93 (93)
89 1dcq_A PYK2-associated protein 99.8 9.4E-20 3.2E-24 171.4 13.2 123 65-188 129-264 (278)
90 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-20 8.6E-25 150.6 8.0 104 62-166 5-112 (115)
91 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.8E-20 3.3E-24 141.9 11.0 92 94-186 1-92 (93)
92 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-19 4.5E-24 183.7 13.6 124 66-190 132-268 (497)
93 1bi7_B P16INK4A, MTS1, multipl 99.8 5.7E-20 2E-24 156.9 9.1 108 60-169 39-151 (156)
94 2vge_A RELA-associated inhibit 99.8 7E-21 2.4E-25 173.8 3.5 129 60-189 48-192 (229)
95 1sw6_A Regulatory protein SWI6 99.8 4.2E-20 1.4E-24 177.2 8.3 114 60-173 158-327 (327)
96 3jue_A Arfgap with coiled-coil 99.8 2E-19 6.9E-24 176.0 12.0 121 64-185 197-324 (368)
97 2b0o_E UPLC1; arfgap, structur 99.8 3.1E-19 1.1E-23 169.8 12.4 120 65-185 150-282 (301)
98 2jab_A H10-2-G3; HER2, darpin, 99.8 1.5E-17 5.1E-22 138.5 15.4 92 60-152 41-136 (136)
99 1d9s_A Cyclin-dependent kinase 99.8 2.2E-18 7.5E-23 143.6 9.7 93 60-154 39-136 (136)
100 3aaa_C Myotrophin, protein V-1 99.8 4.3E-18 1.5E-22 139.2 11.3 96 92-188 4-99 (123)
101 3c5r_A BARD-1, BRCA1-associate 99.8 5.7E-18 2E-22 140.9 11.8 98 91-189 6-103 (137)
102 2b0o_E UPLC1; arfgap, structur 99.8 9.9E-19 3.4E-23 166.3 8.1 107 62-175 186-299 (301)
103 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2E-17 6.9E-22 134.2 14.8 93 61-154 30-126 (126)
104 2l6b_A NR1C; ankyrin, consensu 99.7 9.7E-18 3.3E-22 135.3 7.7 98 91-189 5-102 (115)
105 2zgd_A 3 repeat synthetic anky 99.7 2.1E-17 7.2E-22 133.0 9.5 87 91-178 20-106 (110)
106 2aja_A Ankyrin repeat family p 99.7 1.1E-18 3.8E-23 171.2 0.1 136 63-200 89-243 (376)
107 3lvq_E ARF-GAP with SH3 domain 99.7 9.9E-17 3.4E-21 162.5 14.0 103 63-172 168-277 (497)
108 1dcq_A PYK2-associated protein 99.7 1.5E-16 5.1E-21 149.4 13.1 96 59-155 162-264 (278)
109 3ui2_A Signal recognition part 99.7 7.8E-19 2.7E-23 161.4 -2.7 123 65-189 14-138 (244)
110 3ehr_A Osteoclast-stimulating 99.7 6.6E-17 2.3E-21 145.5 8.8 104 59-163 99-207 (222)
111 2zgd_A 3 repeat synthetic anky 99.7 1.9E-16 6.5E-21 127.3 10.3 91 57-148 15-109 (110)
112 2aja_A Ankyrin repeat family p 99.7 4.1E-18 1.4E-22 167.1 -0.7 118 62-187 124-250 (376)
113 3deo_A Signal recognition part 99.6 2.5E-16 8.5E-21 137.8 9.1 95 93-189 42-137 (183)
114 3jue_A Arfgap with coiled-coil 99.6 1.1E-15 3.8E-20 149.3 13.8 109 64-173 233-348 (368)
115 3bbo_2 Ribosomal protein L32; 25.4 14 0.00046 25.4 -0.2 23 344-371 27-49 (57)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=8.4e-26 Score=197.56 Aligned_cols=127 Identities=29% Similarity=0.349 Sum_probs=116.2
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
|..|.+|.||||+|+..++.+++++|++.| ++ |.+|+||||+|+..|+.+++..|| .+|+++|.+|..|+||||+
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gadvn~~d~~G~TpLh~ 109 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHH 109 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HCcCCCCCCCCCCCCHHHH
Confidence 445779999999999999999999999999 55 478999999999999999877766 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCC
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t 187 (371)
|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+...+..+.+.|.+
T Consensus 110 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 110 AAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999999999999864
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=1.3e-24 Score=190.04 Aligned_cols=121 Identities=27% Similarity=0.330 Sum_probs=109.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHCC-CCC---CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHH
Q 043128 68 RGIHEALDSYDFELLKLLLDES-NVT---LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPA 143 (371)
Q Consensus 68 TpLh~Aa~~g~~e~vk~LL~~g-~in---~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~ 143 (371)
++|+.||+.|+.++|+.||+.| ++| .+|+||||+|+..++.+++..++ ..|++++.+|..|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHH
Confidence 4799999999999999999999 654 78999999999999988877776 679999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 144 VLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 144 iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
++++|+++|+++|.+|.+|+||||+|+..|+...+..+.+.|.++.
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~ 130 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 130 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999997777776666665443
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2e-24 Score=180.51 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=115.6
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCC-CCcHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDAR-GHTVL 133 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~-G~TpL 133 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+. |+.+++..|+ .+|+++|.+|.. |+|||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTTTTBCHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCCCCCCHH
Confidence 3456779999999999999999999999999 54 4789999999999 9999887777 569999999999 99999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 134 HVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 134 h~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999888888887775
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=5.1e-23 Score=178.09 Aligned_cols=124 Identities=23% Similarity=0.240 Sum_probs=103.0
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A 120 (169)
T 2y1l_E 42 AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KNGADVNANDMEGHTPLHLA 120 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHH
Confidence 35668889999999999999999999888 44 467888999999888888766666 56888888888889999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|
T Consensus 121 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 121 AMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999998888888999999998888877777776654
No 5
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=2.1e-23 Score=188.69 Aligned_cols=128 Identities=17% Similarity=0.140 Sum_probs=110.5
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC--------CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCC--
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV--------TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDA-- 127 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i--------n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~-- 127 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++..+.
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~ 108 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALL-ARGASVSARATGS 108 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCSG
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH-hCCCCCCcccCCc
Confidence 4445779999999999999999999999998 32 358999999999999988877776 56999998865
Q ss_pred -----------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcH----hhHHhcCCC
Q 043128 128 -----------RGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDY----IEATKQGQE 187 (371)
Q Consensus 128 -----------~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v----~~~~~~G~t 187 (371)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+ +.+...|..
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 799999999999999999999999999999999999999999999877665 666655543
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=3.1e-23 Score=178.57 Aligned_cols=127 Identities=16% Similarity=0.112 Sum_probs=111.6
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 107 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL-DCGVDVNEYDWNGGTPLL 107 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHH
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCcCCCCCCCHHH
Confidence 4456778999999999999999999999998 44 478899999999999988877777 558999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+++.
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888877776653
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=8.6e-24 Score=186.36 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=114.6
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..|..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHH
Confidence 446779999999999999999999999998 44 478999999999999999887777 4589999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 999999999999999999999999999999999999987777776666665443
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=7.8e-24 Score=198.23 Aligned_cols=130 Identities=24% Similarity=0.196 Sum_probs=115.6
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
+|..|.+|+||||+|+..|+.++|++|++.| ++ +..|.||+|+|+..++.+++..|+ ..|+++|.+|..|+||||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL-DSNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTCCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHH-HCCCCCCCCCCCCCCHHH
Confidence 3456779999999999999999999999999 44 478999999999999988776666 679999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+...+..+.+.|.++.
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999999997666666666665443
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.90 E-value=4.9e-23 Score=189.68 Aligned_cols=110 Identities=19% Similarity=0.263 Sum_probs=56.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+
T Consensus 87 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALHWAA 165 (253)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH-HTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH-HcCCCCCCcCCCCCCHHHHHH
Confidence 334555555555555555555555544 11 234555555555555544444443 335555555555555555555
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~ 173 (371)
..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 166 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 166 AVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC
Confidence 555555555555555555555555555555555544
No 10
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.5e-23 Score=175.11 Aligned_cols=123 Identities=21% Similarity=0.142 Sum_probs=111.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
....|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHH
Confidence 3557899999999999999999999999 55 478999999999999999877777 669999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
..|+.+++++|+++|++++.+|.+|+||||+|+..++...+..+.+.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999988888877765
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.90 E-value=1.9e-22 Score=181.12 Aligned_cols=111 Identities=21% Similarity=0.194 Sum_probs=53.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAAR 138 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~ 138 (371)
+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+...+.+++..+..|+||||+|+.
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 344555555555555555555555544 22 23444555555555554444444433222444445555555555555
Q ss_pred cCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC
Q 043128 139 RKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 139 ~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~ 173 (371)
.|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence 55555555555555555555555555555555444
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=1.2e-22 Score=172.77 Aligned_cols=118 Identities=22% Similarity=0.151 Sum_probs=107.4
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 108 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-KHGADVNAKDMLKMTALHWAT 108 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH
Confidence 3668999999999999999999999999 44 478999999999999988877776 679999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhh
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIE 180 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~ 180 (371)
..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..
T Consensus 109 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999988766544
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.90 E-value=9.9e-23 Score=179.99 Aligned_cols=131 Identities=19% Similarity=0.204 Sum_probs=115.1
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHH
Q 043128 58 EVDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVL 133 (371)
Q Consensus 58 ~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpL 133 (371)
..+..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+...+++++.+|..|+|||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 34556779999999999999999999999999 55 478999999999999999999999788899999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCC-CCCCccCCCCCcHHHHHHHcCC-----CCcHhhHHhcCCCh
Q 043128 134 HVAARRKEPAVLVTLLSKG-GCASETTSDGQTAVAICRRMTR-----RKDYIEATKQGQET 188 (371)
Q Consensus 134 h~Aa~~g~~~iv~~LL~~G-a~in~~d~~G~TpLh~A~~~~~-----~~~v~~~~~~G~t~ 188 (371)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..+. ...+..+.+.|.++
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 9999999999999999998 9999999999999999998776 44555555555443
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.90 E-value=4.2e-23 Score=176.40 Aligned_cols=125 Identities=19% Similarity=0.175 Sum_probs=110.9
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+..|.||||+|+. |+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 109 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL-EFQADVNIEDNEGNLPLHL 109 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHH
Confidence 4456789999999998 9999999999999 54 468999999999999988877776 5689999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCC-CCccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 136 AARRKEPAVLVTLLSKGGC-ASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~-in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+...+..+.++|.
T Consensus 110 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 110 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999998 58999999999999999999999988888875
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=4.3e-23 Score=178.51 Aligned_cols=129 Identities=18% Similarity=0.151 Sum_probs=116.9
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 107 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL-ERDVDINIYDWNGGTPLL 107 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHH
Confidence 4456779999999999999999999999999 44 478999999999999998877776 679999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.++|...
T Consensus 108 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 108 YAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888776543
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=3.4e-23 Score=182.56 Aligned_cols=125 Identities=20% Similarity=0.196 Sum_probs=114.6
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+
T Consensus 62 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 140 (192)
T 2rfm_A 62 EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHGANVNDRNLEGETPLIV 140 (192)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTCCCHHHH
T ss_pred ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHH
Confidence 345668999999999999999999999999 54 478999999999999998877766 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+...+..+.+.|
T Consensus 141 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 141 ASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999988888877665
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=4e-23 Score=177.46 Aligned_cols=125 Identities=21% Similarity=0.188 Sum_probs=103.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-----CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-----NVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-----~in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
+.+|.||||.|+..|+.++++.|++.+ ..+..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHH
Confidence 457889999999999999999999865 23467789999999999888777766 568999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
..|+.+++++|+++|++++.+|.+|+||||+|+..|+...+..+.+.|.++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999988666666666655443
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=4.1e-23 Score=175.57 Aligned_cols=123 Identities=17% Similarity=0.155 Sum_probs=110.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCC---CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCH
Q 043128 66 RVRGIHEALDSYDFELLKLLLDES---NVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEP 142 (371)
Q Consensus 66 g~TpLh~Aa~~g~~e~vk~LL~~g---~in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~ 142 (371)
..|+||.|+..|+.+++++|++.| ..+..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 468999999999999999999999 44678999999999999999887777 67999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 143 AVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 143 ~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++.
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999987777766666665443
No 19
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=7.3e-23 Score=166.68 Aligned_cols=121 Identities=28% Similarity=0.328 Sum_probs=113.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
+|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999998 44 578999999999999999877776 569999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 141 EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
+.+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|.
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999998888875
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.89 E-value=2.3e-22 Score=180.50 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=114.6
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
+..+..|.||||+|+..|+.+++++|++.+ ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 52 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 52 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI-NSHADVNAVDDLGKSALH 130 (223)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTSCBHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH-HcCCCCcCcCCCCCcHHH
Confidence 345679999999999999999999999998 33 478999999999999999877777 579999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999998777777766666544
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=1e-22 Score=188.55 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=92.5
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCC-------------
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAG------------- 121 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gad------------- 121 (371)
++..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL-QPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHS-SSCCSSCCCC--------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhh-ccCCCCchhhHHHHhhcc
Confidence 4445667888888888888888888888887 44 467788888888888777666555 33433
Q ss_pred ----------------------------------ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCC-CCcHH
Q 043128 122 ----------------------------------LNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSD-GQTAV 166 (371)
Q Consensus 122 ----------------------------------in~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~-G~TpL 166 (371)
++.+|..|+||||+|+..|+.+++++|+++|++++.++.. |+|||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 6667777888888888888888888888888888877744 88888
Q ss_pred HHHHHcCCCCcHhhHHhcCCCh
Q 043128 167 AICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 167 h~A~~~~~~~~v~~~~~~G~t~ 188 (371)
|+|+..|+...+..+.+.|.++
T Consensus 197 ~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 197 HLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 8888877655555555554433
No 22
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=5.6e-23 Score=176.91 Aligned_cols=124 Identities=16% Similarity=0.135 Sum_probs=112.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
.|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcC
Confidence 5899999999999999999999998 44 578999999999999999887777 569999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 141 EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT 129 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999998777777777766543
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=3.9e-23 Score=180.29 Aligned_cols=130 Identities=21% Similarity=0.216 Sum_probs=103.2
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~ 110 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLL-QYKADINAVNEHGNVPLH 110 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHH
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHH
Confidence 4445668888888888888888888888888 44 467888888888888877766665 568888888888888888
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+.+.|.++.
T Consensus 111 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 111 YACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 8888888888888888888888888888888888888777777777777776554
No 24
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=1.2e-22 Score=175.76 Aligned_cols=126 Identities=19% Similarity=0.197 Sum_probs=112.1
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
....+.++||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHH
Confidence 3457899999999999999999999999 55 478999999999999999887777 569999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|.++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999777777776666544
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=3.3e-22 Score=180.46 Aligned_cols=143 Identities=20% Similarity=0.171 Sum_probs=117.5
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 111 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLH 111 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHH
Confidence 3445678999999999999999999999998 44 467899999999999988777666 568999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCC----------CcHhhHHhcCCChh---hccCCHHHHHHH
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRR----------KDYIEATKQGQETN---KDRLCIDVLERE 201 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~----------~~v~~~~~~G~t~l---~~~~~~~ile~~ 201 (371)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. ++++..+..|.||+ ....+.++++..
T Consensus 112 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 191 (231)
T 3aji_A 112 YAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFL 191 (231)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999999999999999999999998754 44444455566666 445577777773
Q ss_pred H
Q 043128 202 M 202 (371)
Q Consensus 202 ~ 202 (371)
+
T Consensus 192 l 192 (231)
T 3aji_A 192 V 192 (231)
T ss_dssp H
T ss_pred H
Confidence 3
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=2.2e-22 Score=181.60 Aligned_cols=130 Identities=22% Similarity=0.214 Sum_probs=117.1
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 66 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~ 144 (231)
T 3aji_A 66 VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGGANPDAKDHYDATAMH 144 (231)
T ss_dssp SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCcHHH
Confidence 3445679999999999999999999999999 54 578999999999999998877776 679999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|.++.
T Consensus 145 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 145 RAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999999998777777777776554
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=7e-23 Score=189.73 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=112.1
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-C---C---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-N---V---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHT 131 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~---i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~T 131 (371)
.+..|.+|.||||+|+..|+.++|++|++.| + + |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY-AAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCC
Confidence 3456789999999999999999999999987 4 3 478999999999999999887777 579999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCC-----------------------------------------------CCccCCCCCc
Q 043128 132 VLHVAARRKEPAVLVTLLSKGGC-----------------------------------------------ASETTSDGQT 164 (371)
Q Consensus 132 pLh~Aa~~g~~~iv~~LL~~Ga~-----------------------------------------------in~~d~~G~T 164 (371)
|||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998865 7788999999
Q ss_pred HHHHHHHcCCCCcHhhHHhcCCC
Q 043128 165 AVAICRRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 165 pLh~A~~~~~~~~v~~~~~~G~t 187 (371)
|||+|+..|+...+..+.+.|..
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~ 183 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGAD 183 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999976666666655443
No 28
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.89 E-value=1.2e-22 Score=186.92 Aligned_cols=111 Identities=22% Similarity=0.151 Sum_probs=101.1
Q ss_pred CCCCCchHHHHHHHc---CCHHHHHHHHHCC-CCC--------------CCCchHHHHHHHcCCHHHHHHHHhhCCCCcc
Q 043128 62 MHATRVRGIHEALDS---YDFELLKLLLDES-NVT--------------LDDAYALHYAAAYCSPKVFKEVLNMDSAGLN 123 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~---g~~e~vk~LL~~g-~in--------------~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin 123 (371)
.+..|.||||+|+.. |+.+++++|++.| +++ ..|.||||+|+..|+.+++..|+ .+|+++|
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV-ENGADVH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHH-HcCCCCC
Confidence 467999999999999 9999999999998 332 57999999999999999877776 5699999
Q ss_pred ccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCCCccCCCCCcHHHHHHHcC
Q 043128 124 LKDAR-------------GHTVLHVAARRKEPAVLVTLLS---KGGCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 124 ~~d~~-------------G~TpLh~Aa~~g~~~iv~~LL~---~Ga~in~~d~~G~TpLh~A~~~~ 173 (371)
.+|.. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcc
Confidence 99886 9999999999999999999999 99999999999999999999943
No 29
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2.2e-23 Score=178.17 Aligned_cols=127 Identities=19% Similarity=0.119 Sum_probs=111.2
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc-HHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHT-VLHV 135 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~T-pLh~ 135 (371)
..++.|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+ .|+.+++..|+ .+|+++|.+|..|+| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHH
Confidence 34678999999999999999999999999 54 478999999996 88888877776 669999999999999 9999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~ 138 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR 138 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999998888888888876554
No 30
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=2.1e-22 Score=185.50 Aligned_cols=131 Identities=19% Similarity=0.175 Sum_probs=112.6
Q ss_pred cCCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcH
Q 043128 57 AEVDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTV 132 (371)
Q Consensus 57 ~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~Tp 132 (371)
...+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+.....+++.++..|+||
T Consensus 48 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 48 SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 333445779999999999999999999999999 54 47899999999999999988888865444999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCC
Q 043128 133 LHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 133 Lh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t 187 (371)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.+
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 182 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 182 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999866555555555543
No 31
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.89 E-value=5.2e-22 Score=186.08 Aligned_cols=127 Identities=18% Similarity=0.196 Sum_probs=102.9
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCC---------
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDA--------- 127 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~--------- 127 (371)
..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++..|.
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI-SQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCcCCCCCCHHHHH
Confidence 34668899999999999999999999988 54 467889999999998888776666 55788776553
Q ss_pred ---------------------------------------------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 043128 128 ---------------------------------------------------RGHTVLHVAARRKEPAVLVTLLSKGGCAS 156 (371)
Q Consensus 128 ---------------------------------------------------~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in 156 (371)
.|+||||+|+..|+.+++++|+++|++++
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 46788889999999999999999999999
Q ss_pred ccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 157 ETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 157 ~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
.+|..|+||||+|+..|+...+..+.+.|.++
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 99999999999999988666665555555443
No 32
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=1.2e-21 Score=180.78 Aligned_cols=121 Identities=21% Similarity=0.149 Sum_probs=103.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAAR 138 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~ 138 (371)
+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFL-SKGADVNECDFYGFTAFMEAAV 114 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTCCBHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCcccCCHHHHHHH
Confidence 567899999999999999999999998 44 478899999999999988777766 5689999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcc----------CCCCCcHHHHHHHcCCCCcHhhHHhc
Q 043128 139 RKEPAVLVTLLSKGGCASET----------TSDGQTAVAICRRMTRRKDYIEATKQ 184 (371)
Q Consensus 139 ~g~~~iv~~LL~~Ga~in~~----------d~~G~TpLh~A~~~~~~~~v~~~~~~ 184 (371)
.|+.+++++|+++|++++.. +..|.||||+|+..|+...+..+...
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 99999999999999999887 78899999999998865555555543
No 33
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=1.2e-22 Score=174.44 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=110.8
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 114 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KHGAVVNVADLWKFTPLHE 114 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH-hCCCCCCCcCCCCCCHHHH
Confidence 345678999999999999999999999999 54 578999999999999999877766 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
|+..|+.+++++|+++|++++.+|.+|+||||+|+. ++...+..+...|
T Consensus 115 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 115 AAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 999999999999999999999999999999999876 6667777766665
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=7.9e-22 Score=177.39 Aligned_cols=128 Identities=18% Similarity=0.098 Sum_probs=108.5
Q ss_pred cCCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-C------CCCCCchHHHHHHHcCCHHHHHHHHhhCC--CCccccCC
Q 043128 57 AEVDPMHATRVRGIHEALDSYDFELLKLLLDES-N------VTLDDAYALHYAAAYCSPKVFKEVLNMDS--AGLNLKDA 127 (371)
Q Consensus 57 ~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~------in~~G~tpLh~Aa~~g~~~~v~~LL~~~g--adin~~d~ 127 (371)
...+..+..|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++..|+ .+| ++++.+|.
T Consensus 27 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~ 105 (228)
T 2dzn_A 27 SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY-DRPLKPDLNKITN 105 (228)
T ss_dssp GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH-SSSSCCCTTCCCT
T ss_pred cccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCcccccCCc
Confidence 334445778999999999999999999999998 3 4568999999999999988877777 556 88999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 128 RGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 128 ~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999988655555554444
No 35
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.5e-23 Score=174.99 Aligned_cols=118 Identities=19% Similarity=0.123 Sum_probs=106.2
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCcccCcCCCCCCHHHHHH
Confidence 4679999999999999999999999999 54 478999999999999999877766 679999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhh
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIE 180 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~ 180 (371)
..|+.+++++|+++|++++.+|..|.||||+|+..+....+..
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 9999999999999999999999999999999987654444433
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=1.8e-22 Score=187.00 Aligned_cols=119 Identities=23% Similarity=0.113 Sum_probs=81.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
+|+||||+|+..|+.+++++|++.| ++ |.+|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcC
Confidence 4677777777777777777777777 43 356777777777777777666555 457777777777777777777777
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 141 EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+.+++++|+++|++++. +.+|.||||+|+..|+...+..+.+.|
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g 124 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYG 124 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 77777777777777764 345777777777776544444444333
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=3.5e-22 Score=187.78 Aligned_cols=140 Identities=18% Similarity=0.042 Sum_probs=118.0
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|+||||+|+..|+.+++++|++.| ++ |.+|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHH
Confidence 4556889999999999999999999999999 55 478999999999999999877777 569999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhc----------CCChh---hccCCHHHHHH
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQ----------GQETN---KDRLCIDVLER 200 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~----------G~t~l---~~~~~~~ile~ 200 (371)
+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+...+..+... |.||+ ....+.++++.
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999999999999998654 599999999999865555555554 44554 33445666665
No 38
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.7e-22 Score=165.65 Aligned_cols=108 Identities=24% Similarity=0.238 Sum_probs=98.0
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHH
Confidence 4568999999999999999999999999 54 478999999999999998877766 679999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~ 170 (371)
..|+.+++++|+++|++++.+|.+|+||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 999999999999999999999999999999994
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=2.4e-22 Score=173.75 Aligned_cols=123 Identities=16% Similarity=0.107 Sum_probs=110.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCC-C----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 66 RVRGIHEALDSYDFELLKLLLDES-N----VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 66 g~TpLh~Aa~~g~~e~vk~LL~~g-~----in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
+.||||.|+..|+.++++.|++.| . .+..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCC
Confidence 578999999999999999999998 2 3678999999999999999888777 568999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 141 EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|.++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 129 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT 129 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999997777777777665543
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.88 E-value=3.5e-22 Score=180.95 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=113.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhhhhhhccccCCCCCCCCCchHHHHHHHcCCHHHHHHHHHC
Q 043128 9 PILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDE 88 (371)
Q Consensus 9 ~il~~a~~~~~~~l~~~~~~~vk~lp~~~~~~i~~lr~~l~~~~~~~~~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~ 88 (371)
..|+.|...|..+++...++.+. . .....+..+..|.||||+|+..|+.+++++|++.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~-------------------~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 68 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQ-------------------Q---GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 68 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHH-------------------H---TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHH-------------------h---cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHc
Confidence 46788888887777777665320 0 1122334455777777777777777777777777
Q ss_pred C-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCC----CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccC-
Q 043128 89 S-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSA----GLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETT- 159 (371)
Q Consensus 89 g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~ga----din~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d- 159 (371)
| ++ +..|.||||+|+..|+.+++..|+.. ++ +++..|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 69 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 147 (241)
T 1k1a_A 69 GASPMALDRHGQTAAHLACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDI 147 (241)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 7 33 45677777777777777776666644 44 677777777777777777777777777777777777777
Q ss_pred CCCCcHHHHHHHcCC----------CCcHhhHHhcCCChh---hccCCHHHHHHHH
Q 043128 160 SDGQTAVAICRRMTR----------RKDYIEATKQGQETN---KDRLCIDVLEREM 202 (371)
Q Consensus 160 ~~G~TpLh~A~~~~~----------~~~v~~~~~~G~t~l---~~~~~~~ile~~~ 202 (371)
..|.||||+|+..|+ +++++..+..|.||+ ....+.++++..+
T Consensus 148 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 148 KSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV 203 (241)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 677777777777764 334444444455555 3345677777633
No 41
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=6.2e-22 Score=168.21 Aligned_cols=122 Identities=15% Similarity=0.114 Sum_probs=106.0
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+ +..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||
T Consensus 29 ~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~ 106 (156)
T 1bd8_A 29 PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV-EHGADVNVPDGTGALPIH 106 (156)
T ss_dssp TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHH
T ss_pred ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHH
Confidence 34456689999999 8899999999999998 54 478999999999999988777666 578999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHh
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATK 183 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~ 183 (371)
+|+..|+.+++++|+++ ++++.+|.+|.||||+|+..|+...+..+.+
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 99999999999999998 9999999999999999999988777766553
No 42
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.88 E-value=8.9e-23 Score=192.02 Aligned_cols=129 Identities=16% Similarity=0.084 Sum_probs=118.3
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC-CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NVT-LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in-~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
.+..|..|.||||+|+..|+.+++++|++.| +++ .+|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILL-FSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHH-HTTCCTTCCCTTSCCHHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCcHHHHH
Confidence 3556789999999999999999999999999 665 57999999999999999887777 56999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCC-CcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDG-QTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G-~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
+..|+.+++++|+++|++++.+|..| .||||+|+..|+...+..+...|...
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 99999999999999999999999999 79999999999988888888877544
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.88 E-value=5.1e-22 Score=178.63 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=114.3
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC---CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES---NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g---~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
.+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~ 146 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-ENGASVRIKDKFNQIPLHR 146 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHH-HcCCCccccCCCCCCHHHH
Confidence 5679999999999999999999999987 33 468999999999999999877777 5699999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CCCCccCCCCCcHHHHHHHcCCCCcHhhHH-hcCCChh
Q 043128 136 AARRKEPAVLVTLLSKG-GCASETTSDGQTAVAICRRMTRRKDYIEAT-KQGQETN 189 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~G-a~in~~d~~G~TpLh~A~~~~~~~~v~~~~-~~G~t~l 189 (371)
|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+...+..+. +.|.++.
T Consensus 147 A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 99999999999999999 999999999999999999999877777777 6665544
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=1.1e-21 Score=177.71 Aligned_cols=128 Identities=22% Similarity=0.240 Sum_probs=112.8
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+.+|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.++..|+||||+
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSCCHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCCcHHHH
Confidence 345678999999999999999999999999 54 478999999999999999877776 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 136 AARRKEPAVLVTLLSKG-GCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~G-a~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
|+..|+.+++++|+++| ++++..+..|.||||+|+..++...+..+.+.|.++
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999998 899999999999999999998766666666665443
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=1.5e-21 Score=176.79 Aligned_cols=127 Identities=18% Similarity=0.129 Sum_probs=107.6
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+....++++..+..|+||||+|
T Consensus 39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A 118 (237)
T 3b7b_A 39 TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA 118 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Confidence 34668999999999999999999999998 44 478899999999999988888877554488999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCC
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t 187 (371)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+...+..+.+.|.+
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999998865555555555443
No 46
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=4.6e-22 Score=184.17 Aligned_cols=138 Identities=20% Similarity=0.147 Sum_probs=97.8
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++. +..|+||||+|
T Consensus 31 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~-~~~g~t~L~~A 108 (261)
T 2xai_A 31 IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHGASVQP-ESDLASPIHEA 108 (261)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSC-SCTTCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCC-CCCCCCHHHHH
Confidence 34557888888888888888888888877 44 467778888888888777666555 55777774 34577888888
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhc---------CCChh---hccCCHHHHHH
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQ---------GQETN---KDRLCIDVLER 200 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~---------G~t~l---~~~~~~~ile~ 200 (371)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+. |.||+ ....+.++++.
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~ 184 (261)
T 2xai_A 109 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACL 184 (261)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHH
Confidence 888888888888888888888888888888888877755544444443 44554 33456777776
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.88 E-value=7.6e-22 Score=190.91 Aligned_cols=182 Identities=14% Similarity=0.076 Sum_probs=136.6
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCC-CCchHHHHHHHcCCHHHHHHHHhhC---CCCccc----------
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NVTL-DDAYALHYAAAYCSPKVFKEVLNMD---SAGLNL---------- 124 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in~-~G~tpLh~Aa~~g~~~~v~~LL~~~---gadin~---------- 124 (371)
+..+..|.||||+|+..|+.++|++|++.| +++. +|.||||+|+..|+.+++..|+... |++++.
T Consensus 47 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 126 (364)
T 3ljn_A 47 TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREV 126 (364)
T ss_dssp TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCE
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhh
Confidence 345679999999999999999999999999 6664 8999999999999999887777431 677776
Q ss_pred -------cCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhh---------------
Q 043128 125 -------KDARGHTVLHVAARRK--EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIE--------------- 180 (371)
Q Consensus 125 -------~d~~G~TpLh~Aa~~g--~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~--------------- 180 (371)
+|..|+||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+...+..
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 206 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY 206 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc
Confidence 8889999999999999 9999999999999999999999999999999886544444
Q ss_pred HHhcCCChh---hccCCHHHHHHHHHhc--ccCCCccchhhhhhhhHHHHHhhhhchhhHHHhhCccccHHHh
Q 043128 181 ATKQGQETN---KDRLCIDVLEREMRRN--SMSGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSEAIIAM 248 (371)
Q Consensus 181 ~~~~G~t~l---~~~~~~~ile~~~~~~--p~~~~~~~~~~~~~~~l~~~ll~le~rv~~arll~~~e~~~~~ 248 (371)
.+..|.||+ ...++.++++..+... +...+....++ ++.. -..++.+++++|+...+....
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp-----L~~A--~~~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVP-----LYLS--VRAAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCH-----HHHH--HHTCCHHHHHHHHHHSCHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH-----HHHH--HHhChHHHHHHHHHcCCchhh
Confidence 445566776 5566888888833321 11111100011 1111 123567788888877776643
No 48
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=2.6e-21 Score=191.51 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=126.5
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ ..+++++..+..|+||||+|
T Consensus 75 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A 153 (437)
T 1n11_A 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL-EKEASQACMTKKGFTPLHVA 153 (437)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCcCCCCCCCCHHHHH
Confidence 34556777777777777777777777766 33 356667777777777766665555 34666666666777777777
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC----------CChh---hccCCHHHHHHHHH
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG----------QETN---KDRLCIDVLEREMR 203 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G----------~t~l---~~~~~~~ile~~~~ 203 (371)
+..|+.+++++|+++|++++..+..|.||||+|+..++...+..+...| .+|+ ......++++..+.
T Consensus 154 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 233 (437)
T 1n11_A 154 AKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 7777777777777777777777777777777777766555555554443 3333 33445666665222
Q ss_pred hccc--CCCccchhhhhhhhHHHHHhhhhchhhHHHhhCccc---------cHHHhhhhhhcCcccccccccccCCCCCC
Q 043128 204 RNSM--SGNLALSSEVMADDFQMKLNYLENRVSFARCLFPSE---------AIIAMDIADADATNFCTGLSASKSKGSSG 272 (371)
Q Consensus 204 ~~p~--~~~~~~~~~~~~~~l~~~ll~le~rv~~arll~~~e---------~~~~~~ia~~~~~~e~~~~~~~~~~~~~~ 272 (371)
...- ..+.....+ ++. --..++.+++++|+..+ +..+++.|-..+..++...+.. .+.
T Consensus 234 ~g~~~~~~~~~g~t~-----L~~--A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~----~g~ 302 (437)
T 1n11_A 234 YGGSANAESVQGVTP-----LHL--AAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK----HGV 302 (437)
T ss_dssp TTCCTTCCCTTCCCH-----HHH--HHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH----HTC
T ss_pred cCCCCCCCCCCCCCH-----HHH--HHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh----CCc
Confidence 2110 000000000 010 01123455555555433 3356667766676666666553 233
Q ss_pred CCccccCC-CChHHHHHhh--HH-HHHHHH
Q 043128 273 NLKEVDLN-ETPSMQAKRL--AF-TELSMI 298 (371)
Q Consensus 273 ~~~~~d~~-~~p~~~~~~~--~~-~~~l~~ 298 (371)
.....|-. .||....-.. .. +..|.+
T Consensus 303 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 332 (437)
T 1n11_A 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQ 332 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHSSCSHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 44444433 6777655332 33 555554
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=6.5e-22 Score=195.79 Aligned_cols=120 Identities=23% Similarity=0.228 Sum_probs=75.0
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.+..|.||||+|+..|+.++|++|++.| ++ +..|.||||+|+..|+.+++..|+. +|+++|.+|..|+||||+|+
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHH
Confidence 4556677777777777777777777666 33 3456677777777766666555553 46666666666777777777
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHH
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEAT 182 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~ 182 (371)
..|+.+++++|+++|++++..+..|.||||+|+..|+...+..+.
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 133 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 133 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 777777777777767776666666677777766666544444433
No 50
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=4e-22 Score=173.84 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=107.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHc
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARR 139 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~ 139 (371)
++.++||.|+..|+.+++++|++.+ ++ +..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHc
Confidence 6889999999999999999999986 33 578999999999999999877777 56999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 140 KEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 140 g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|.++
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999999999999999999999999999999998766666666555443
No 51
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.88 E-value=1.8e-21 Score=176.21 Aligned_cols=192 Identities=17% Similarity=0.165 Sum_probs=138.4
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHH----CC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLD----ES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTV 132 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~----~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~Tp 132 (371)
..|.+|.||||+|+..|+.+++++|++ .| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTA 82 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCH
Confidence 457799999999999999999999987 55 43 477999999999999988877776 5789999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCC----CCCccCCCCCcHHHHHHHcCCCCcHhhHH-----------hcCCChh---hccCC
Q 043128 133 LHVAARRKEPAVLVTLLSKGG----CASETTSDGQTAVAICRRMTRRKDYIEAT-----------KQGQETN---KDRLC 194 (371)
Q Consensus 133 Lh~Aa~~g~~~iv~~LL~~Ga----~in~~d~~G~TpLh~A~~~~~~~~v~~~~-----------~~G~t~l---~~~~~ 194 (371)
||+|+..|+.+++++|+++|+ +++..|..|+||||+|+..++...+..+. ..|.+|+ .....
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999999987 88999999999999999988555554444 4456666 44568
Q ss_pred HHHHHHHHHhccc--C----CCccchhhhhhhhHHHHHhhhhchhhHHHhhCccc---------cHHHhhhhhhcCcccc
Q 043128 195 IDVLEREMRRNSM--S----GNLALSSEVMADDFQMKLNYLENRVSFARCLFPSE---------AIIAMDIADADATNFC 259 (371)
Q Consensus 195 ~~ile~~~~~~p~--~----~~~~~~~~~~~~~l~~~ll~le~rv~~arll~~~e---------~~~~~~ia~~~~~~e~ 259 (371)
.++++..+....- . +...+..+. ..++.+++++|+..+ +.+++++|...+..++
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----------~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSAS-----------GRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHH-----------HHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHH-----------HcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 8888884433111 1 111111111 123455556555443 4467777777776666
Q ss_pred ccccc
Q 043128 260 TGLSA 264 (371)
Q Consensus 260 ~~~~~ 264 (371)
...+.
T Consensus 232 ~~~l~ 236 (241)
T 1k1a_A 232 LRGKA 236 (241)
T ss_dssp HTC--
T ss_pred Hhhhc
Confidence 65544
No 52
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=1e-21 Score=173.52 Aligned_cols=126 Identities=17% Similarity=0.098 Sum_probs=114.2
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
+..+..|.||||+|+..|+.+++++|++.+ ++ +..|.||||+|+..|+.+++..|+...+++++.+|..|+||||
T Consensus 66 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 145 (201)
T 3hra_A 66 NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALI 145 (201)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHH
Confidence 345678999999999999999999999554 33 4789999999999999999888886644999999999999999
Q ss_pred HHHHcCC-----HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 135 VAARRKE-----PAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 135 ~Aa~~g~-----~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+...+..+.++|
T Consensus 146 ~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 146 EAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999998 99999999999999999999999999999999999988888776
No 53
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.88 E-value=3.2e-22 Score=181.75 Aligned_cols=131 Identities=18% Similarity=0.191 Sum_probs=114.3
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCC------ccccCC
Q 043128 58 EVDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAG------LNLKDA 127 (371)
Q Consensus 58 ~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gad------in~~d~ 127 (371)
.++..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ ..|++ ++..+.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLT-QSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHH-HSTTTTSSSCGGGCCCT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhHHHHhhccCC
Confidence 35566779999999999999999999999999 54 478999999999999999887777 45654 677889
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 128 RGHTVLHVAARRKEPAVLVTLLSKGGCASETTS-DGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 128 ~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~-~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
.|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+...+..+.+.|.++.
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999998 99999999999998777777777765543
No 54
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=2.1e-22 Score=172.07 Aligned_cols=123 Identities=23% Similarity=0.213 Sum_probs=110.9
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHc
Q 043128 64 ATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARR 139 (371)
Q Consensus 64 ~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~ 139 (371)
+...||||+|+..|+.+++++|++.| ++ |..|.||||+|+. |+.+++..|+ .+|++++.+|..|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHc
Confidence 45789999999999999999999999 44 4789999999999 9988877777 56999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 140 KEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 140 g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|..+
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999888888777777653
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=3.1e-22 Score=187.54 Aligned_cols=124 Identities=15% Similarity=0.114 Sum_probs=106.9
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHH-----HcCCHHHHHHHHhhCCCCccccCCC
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAA-----AYCSPKVFKEVLNMDSAGLNLKDAR 128 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa-----~~g~~~~v~~LL~~~gadin~~d~~ 128 (371)
+|..|.+|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+ ..++.+++..++ ..|++++..|..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~~~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF-RLGNINAKASQA 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH-HHSCTTCCCTTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH-HcCCCccccCCC
Confidence 4556779999999999999999999999998 33 478999999999 556677776666 558899999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHh
Q 043128 129 GHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATK 183 (371)
Q Consensus 129 G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~ 183 (371)
|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+...+..+..
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999885554444444
No 56
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=5.1e-22 Score=168.73 Aligned_cols=133 Identities=18% Similarity=0.155 Sum_probs=112.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 66 RVRGIHEALDSYDFELLKLLLDES--NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 66 g~TpLh~Aa~~g~~e~vk~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
|.||||+|+..|+.+++++|++.+ ++ |..|.||||+ +..|+.+++..|+ .+|++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcC
Confidence 579999999999999999999985 33 5789999999 8899999877777 669999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhH---------HhcCCChh---hccCCHHHHHH
Q 043128 141 EPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEA---------TKQGQETN---KDRLCIDVLER 200 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~---------~~~G~t~l---~~~~~~~ile~ 200 (371)
+.+++++|+++|++++.+|..|+||||+|+..|+...+..+ +..|.||+ ......++++.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999999999999999999999998865555444 44555555 33344555544
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=1.9e-22 Score=185.77 Aligned_cols=111 Identities=19% Similarity=0.179 Sum_probs=99.8
Q ss_pred CCCCchHHHHHH---HcCCHHHHHHHHHCC-CC--------------CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccc
Q 043128 63 HATRVRGIHEAL---DSYDFELLKLLLDES-NV--------------TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNL 124 (371)
Q Consensus 63 d~~g~TpLh~Aa---~~g~~e~vk~LL~~g-~i--------------n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~ 124 (371)
+..|.||||+|+ ..|+.+++++|++.| +. |..|.||||+|+..|+.+++..|| .+|+++|.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLV-EKGADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHH-HTTCCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHH-hCCCCcCc
Confidence 467999999999 679999999999986 21 238999999999999999877776 57999999
Q ss_pred cC--------------CCCCcHHHHHHHcCCHHHHHHHHh---CCCCCCccCCCCCcHHHHHHHcCC
Q 043128 125 KD--------------ARGHTVLHVAARRKEPAVLVTLLS---KGGCASETTSDGQTAVAICRRMTR 174 (371)
Q Consensus 125 ~d--------------~~G~TpLh~Aa~~g~~~iv~~LL~---~Ga~in~~d~~G~TpLh~A~~~~~ 174 (371)
++ ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhcc
Confidence 98 689999999999999999999999 999999999999999999998765
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.3e-21 Score=176.91 Aligned_cols=126 Identities=18% Similarity=0.215 Sum_probs=114.8
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCC----------------CCchHHHHHHHcCCHHHHHHHHhhCCCCc
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NVTL----------------DDAYALHYAAAYCSPKVFKEVLNMDSAGL 122 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in~----------------~G~tpLh~Aa~~g~~~~v~~LL~~~gadi 122 (371)
+..+..|.||||+|+..|+.+++++|++.| +++. .|.||||+|+..|+.+++..|+ .+|+++
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~ 147 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLI-EHGADI 147 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHH-HTTCCT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHH-HCCCCC
Confidence 456779999999999999999999999999 5542 6999999999999999877777 669999
Q ss_pred cccCCCCCcHHHHHHHcCCHHHH----HHHHhCCCCC------CccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 123 NLKDARGHTVLHVAARRKEPAVL----VTLLSKGGCA------SETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 123 n~~d~~G~TpLh~Aa~~g~~~iv----~~LL~~Ga~i------n~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
|.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+...+..+.++|.
T Consensus 148 ~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK 221 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 99999999999999999999988 9999999998 5899999999999999999999999888774
No 59
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.87 E-value=4.2e-22 Score=186.40 Aligned_cols=113 Identities=25% Similarity=0.295 Sum_probs=104.3
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+..|.||+|+|+..++.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|+++|.+|..|+||||+
T Consensus 113 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll-~~gadvn~~~~~g~t~Lh~ 191 (269)
T 4b93_B 113 GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL-QHGASINASNNKGNTALHE 191 (269)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH-HTTCCTTCBCTTSCBHHHH
T ss_pred CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCccccCCCcHHHH
Confidence 345668999999999999999999999999 55 478999999999999999877776 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~ 173 (371)
|+..|+.+++++|+++|++++.+|.+|+||||+|+.++
T Consensus 192 A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 192 AVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 99999999999999999999999999999999998755
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=4.2e-22 Score=183.40 Aligned_cols=127 Identities=18% Similarity=0.230 Sum_probs=114.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC-----------------CCCchHHHHHHHcCCHHHHHHHHhh--CCCC
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NVT-----------------LDDAYALHYAAAYCSPKVFKEVLNM--DSAG 121 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in-----------------~~G~tpLh~Aa~~g~~~~v~~LL~~--~gad 121 (371)
.+..|.||||+|+..|+.++|++|++.| +++ ..|.||||+|+..|+.+++..||.. +|++
T Consensus 89 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~ 168 (260)
T 3jxi_A 89 VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168 (260)
T ss_dssp SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 4568999999999999999999999999 554 3699999999999999988877753 7999
Q ss_pred ccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC-------CccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 122 LNLKDARGHTVLHVAARRKE---------PAVLVTLLSKGGCA-------SETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 122 in~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Ga~i-------n~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+|.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..|+...+..+.++|
T Consensus 169 ~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999999999887 79999999999999 679999999999999999999999998887
Q ss_pred CCh
Q 043128 186 QET 188 (371)
Q Consensus 186 ~t~ 188 (371)
..+
T Consensus 249 ~~~ 251 (260)
T 3jxi_A 249 IAD 251 (260)
T ss_dssp HHH
T ss_pred CCc
Confidence 543
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=3.8e-22 Score=183.50 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=115.3
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC---CC-------------CchHHHHHHHcCCHHHHHHHHhh--CCCCc
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NVT---LD-------------DAYALHYAAAYCSPKVFKEVLNM--DSAGL 122 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in---~~-------------G~tpLh~Aa~~g~~~~v~~LL~~--~gadi 122 (371)
.+..|.||||+|+..|+.+++++|++.| +++ .. |.||||+|+..|+.+++..|+.. +|+++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 3568999999999999999999999999 654 32 99999999999999988887753 79999
Q ss_pred cccCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 123 NLKDARGHTVLHVAAR--RKEPA-------VLVTLLSKGGCA-------SETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 123 n~~d~~G~TpLh~Aa~--~g~~~-------iv~~LL~~Ga~i-------n~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+...+..+.++|.
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 9999999999999999 88888 999999999999 9999999999999999999999999988875
Q ss_pred Ch
Q 043128 187 ET 188 (371)
Q Consensus 187 t~ 188 (371)
.+
T Consensus 246 ~~ 247 (256)
T 2etb_A 246 SG 247 (256)
T ss_dssp HH
T ss_pred CC
Confidence 43
No 62
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=4.7e-22 Score=180.69 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=118.0
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-C---------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCC-C
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-N---------VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDA-R 128 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~---------in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~-~ 128 (371)
+..+..|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++..|+ .+|++++.++. .
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~ 150 (236)
T 1ikn_D 72 ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV-SLGADVNAQEPCN 150 (236)
T ss_dssp CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCC
Confidence 345679999999999999999999999987 2 2467999999999999999877777 56999999998 9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 129 GHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 129 G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.+.|..++
T Consensus 151 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 151 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999999999999999999999999999999999999999999998665
No 63
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=5.2e-22 Score=184.48 Aligned_cols=112 Identities=20% Similarity=0.147 Sum_probs=101.9
Q ss_pred CCCCCchHHHHHHHc---CCHHHHHHHHHCC-C--------------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCcc
Q 043128 62 MHATRVRGIHEALDS---YDFELLKLLLDES-N--------------VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLN 123 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~---g~~e~vk~LL~~g-~--------------in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin 123 (371)
.+..|.||||+|+.. |+.+++++|++.| + .|..|.||||+|+..|+.+++..|| .+|+++|
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll-~~ga~~~ 128 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV-ENGADVQ 128 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-HTTCCTT
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHH-HCCCCcC
Confidence 467899999999987 9999999999987 2 3458999999999999999877776 5699999
Q ss_pred ccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCCCccCCCCCcHHHHHHHcCC
Q 043128 124 LKDA--------------RGHTVLHVAARRKEPAVLVTLLS---KGGCASETTSDGQTAVAICRRMTR 174 (371)
Q Consensus 124 ~~d~--------------~G~TpLh~Aa~~g~~~iv~~LL~---~Ga~in~~d~~G~TpLh~A~~~~~ 174 (371)
.++. .|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccC
Confidence 9987 79999999999999999999999 999999999999999999999876
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.87 E-value=5.6e-21 Score=181.91 Aligned_cols=111 Identities=25% Similarity=0.296 Sum_probs=99.6
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHH
Confidence 4456779999999999999999999999999 54 478999999999999999877777 569999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~ 170 (371)
+|+..|+.+++++|+++|++++..+..|.||+++|+
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~ 165 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCS
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHh
Confidence 999999999999999999999998888877777654
No 65
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.6e-21 Score=181.86 Aligned_cols=166 Identities=19% Similarity=0.104 Sum_probs=118.1
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhhhhhhccccCCCCCCCCCchHHHHHHHcCCHHHHHHHHHC
Q 043128 9 PILVAAFHCQLNQLRSPCIQRVKELPDEVSSEIKSLRVKSNQECEANIAEVDPMHATRVRGIHEALDSYDFELLKLLLDE 88 (371)
Q Consensus 9 ~il~~a~~~~~~~l~~~~~~~vk~lp~~~~~~i~~lr~~l~~~~~~~~~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~ 88 (371)
..|+.|...+..++++..++ .+ ..++..+..|.||||+|+..|+.+++++|++.
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~---------------------~g-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 114 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLIS---------------------QG-----WAVNIITADHVSPLHEACLGGHLSCVKILLKH 114 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHH---------------------TT-----CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHH---------------------CC-----CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC
Confidence 46788888886666444332 01 11333456788888888888888888888888
Q ss_pred C-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCc
Q 043128 89 S-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQT 164 (371)
Q Consensus 89 g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~T 164 (371)
| ++ |..|.||||+|+..|+.+++..|+ .+|++++..+ .|+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 115 ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t 192 (285)
T 3d9h_A 115 GAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT 192 (285)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHH-HCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 8 44 467888888888888877766665 5678877544 4888888888888888888888888888888888888
Q ss_pred HHHHHHHcCCCCcHhhHHhc---------CCChh---hccCCHHHHHHHH
Q 043128 165 AVAICRRMTRRKDYIEATKQ---------GQETN---KDRLCIDVLEREM 202 (371)
Q Consensus 165 pLh~A~~~~~~~~v~~~~~~---------G~t~l---~~~~~~~ile~~~ 202 (371)
|||+|+..|+...+..+.+. |.||+ ....+.++++..+
T Consensus 193 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 193 PLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 88888887765555555444 44555 4455777777733
No 66
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.87 E-value=5e-21 Score=183.22 Aligned_cols=144 Identities=21% Similarity=0.162 Sum_probs=123.4
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC-------------CCCchHHHHHHHcCCHHHHHHHHhhCCCCccc
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NVT-------------LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNL 124 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in-------------~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~ 124 (371)
++..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+.++++.||...|+++|.
T Consensus 118 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~ 197 (337)
T 4g8k_A 118 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 197 (337)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC
T ss_pred hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc
Confidence 4456779999999999999999999999998 443 46899999999999999999888778999999
Q ss_pred cCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-----------CCCcHhhHHhcCCChh
Q 043128 125 KDARGHTVLHVAARRKE----PAVLVTLLSKGGCASETTSDGQTAVAICRRMT-----------RRKDYIEATKQGQETN 189 (371)
Q Consensus 125 ~d~~G~TpLh~Aa~~g~----~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~-----------~~~~v~~~~~~G~t~l 189 (371)
+|..|+||||+++..+. ..++++|+++|++++.+|..|+||||+|+..| .+++++..+..|.||+
T Consensus 198 ~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 198 CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 277 (337)
T ss_dssp CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHH
T ss_pred cCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHH
Confidence 99999999998876543 45889999999999999999999999999987 3566777777888887
Q ss_pred ---hccCCHHHHHHHH
Q 043128 190 ---KDRLCIDVLEREM 202 (371)
Q Consensus 190 ---~~~~~~~ile~~~ 202 (371)
...++.++++..+
T Consensus 278 ~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 278 LLAVELKLKKIAELLC 293 (337)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH
Confidence 5566888888833
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=4.7e-22 Score=184.81 Aligned_cols=128 Identities=20% Similarity=0.227 Sum_probs=114.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC---C--------------CCchHHHHHHHcCCHHHHHHHHhh--CCCC
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NVT---L--------------DDAYALHYAAAYCSPKVFKEVLNM--DSAG 121 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in---~--------------~G~tpLh~Aa~~g~~~~v~~LL~~--~gad 121 (371)
.+..|.||||+|+..|+.+++++|++.| +++ . .|.||||+|+..|+.+++..||.. +|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 4668999999999999999999999999 554 3 699999999999999988887753 7999
Q ss_pred ccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC-------ccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 122 LNLKDARGHTVLHVAARRKE---------PAVLVTLLSKGGCAS-------ETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 122 in~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Ga~in-------~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+|.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..|+...+..+.++|
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 99999999999999999998 899999999999997 48999999999999999999999999998
Q ss_pred C-Chh
Q 043128 186 Q-ETN 189 (371)
Q Consensus 186 ~-t~l 189 (371)
. +|.
T Consensus 257 a~dp~ 261 (273)
T 2pnn_A 257 IHEPE 261 (273)
T ss_dssp TC---
T ss_pred CCCch
Confidence 6 444
No 68
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=169.30 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=108.1
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NVT----LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in----~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+.+++..|+ ..|++++.++..|+||||+
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~ 115 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHL 115 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHH
Confidence 35668999999999999999999999999 443 45899999999999999887777 6699999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-CCcHhhHHhcC
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTR-RKDYIEATKQG 185 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~-~~~v~~~~~~G 185 (371)
|+..|+.+++++|+++|++++.++..|.||||+|+..+. ...+..+...|
T Consensus 116 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~ 166 (240)
T 3eu9_A 116 AAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN 166 (240)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT
T ss_pred HHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC
Confidence 999999999999999999999999999999999997664 44444444433
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=6.5e-22 Score=185.40 Aligned_cols=118 Identities=23% Similarity=0.219 Sum_probs=106.4
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.+..|.||||.|+..|+.++|++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHH
Confidence 3457889999999999999999999999 55 478999999999999999877777 579999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhh
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIE 180 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~ 180 (371)
..|+.+++++|+++|++++..|..|.||||+|+..++...+..
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 157 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN 157 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHH
Confidence 9999999999999999999999999999999988765554443
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=1.1e-20 Score=174.54 Aligned_cols=138 Identities=22% Similarity=0.229 Sum_probs=90.6
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCcccc----------CC
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLK----------DA 127 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~----------d~ 127 (371)
.+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.. +.
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~~~~~~~~ 146 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRK 146 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCCCHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHH-HhCCCcccccccHHHHHhhcc
Confidence 3456777777777777777777777776 33 356677777777777766655555 456776665 56
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCC--------------CCcHhhHHhcCCChh---
Q 043128 128 RGHTVLHVAARRKEPAVLVTLLSK-GGCASETTSDGQTAVAICRRMTR--------------RKDYIEATKQGQETN--- 189 (371)
Q Consensus 128 ~G~TpLh~Aa~~g~~~iv~~LL~~-Ga~in~~d~~G~TpLh~A~~~~~--------------~~~v~~~~~~G~t~l--- 189 (371)
.|.||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..++ +++++..+..|.||+
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A 226 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 226 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 677777777777777777777766 77777777777777777776654 233334444555665
Q ss_pred hccCCHHHHHH
Q 043128 190 KDRLCIDVLER 200 (371)
Q Consensus 190 ~~~~~~~ile~ 200 (371)
....+.++++.
T Consensus 227 ~~~~~~~~v~~ 237 (285)
T 1wdy_A 227 VEKKHLGLVQR 237 (285)
T ss_dssp HHTTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 34456666666
No 71
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.86 E-value=8.1e-21 Score=180.81 Aligned_cols=142 Identities=22% Similarity=0.172 Sum_probs=108.0
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccC---------
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKD--------- 126 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d--------- 126 (371)
+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++..+
T Consensus 85 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL-SHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCccccCCCCcchHH
Confidence 345668899999999999999999999988 44 467889999999998888776666 5578776544
Q ss_pred ---------------------------------------------CCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcc
Q 043128 127 ---------------------------------------------ARGHTVLHVAARR---KEPAVLVTLLSKGGCASET 158 (371)
Q Consensus 127 ---------------------------------------------~~G~TpLh~Aa~~---g~~~iv~~LL~~Ga~in~~ 158 (371)
..|+||||+|+.. +..+++++|+++|++++.+
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 4567888888887 4477888888888888888
Q ss_pred CCCCCcHHHHHHHcCC----------CCcHhhHHhcCCChh---hccCCHHHHHHHH
Q 043128 159 TSDGQTAVAICRRMTR----------RKDYIEATKQGQETN---KDRLCIDVLEREM 202 (371)
Q Consensus 159 d~~G~TpLh~A~~~~~----------~~~v~~~~~~G~t~l---~~~~~~~ile~~~ 202 (371)
|..|+||||+|+..|+ +++++..+..|.||+ ....+.++++..+
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll 300 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL 300 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 8888888888888773 455555556666776 4456778887733
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.86 E-value=4.4e-22 Score=181.81 Aligned_cols=133 Identities=21% Similarity=0.216 Sum_probs=118.4
Q ss_pred cccCCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCC
Q 043128 55 NIAEVDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGH 130 (371)
Q Consensus 55 ~~~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~ 130 (371)
++...+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+|..|+
T Consensus 10 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~n~~d~~g~ 88 (229)
T 2vge_A 10 SPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI-TAGANVNSPDSHGW 88 (229)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCC
T ss_pred CCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCC
Confidence 56666777888999999999999999999999999 55 478999999999999999877777 56999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCCcHHHHH--HHcCCCCcHhhHHhcCCCh
Q 043128 131 TVLHVAARRKEPAVLVTLLSKGGCASETT-SDGQTAVAIC--RRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 131 TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d-~~G~TpLh~A--~~~~~~~~v~~~~~~G~t~ 188 (371)
||||+|+..|+.+++++|+++|++++.++ .+|+||||+| +..|+...+..+.+.|.++
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 99999999999999999999999999987 6999999999 8888777777777766443
No 73
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.3e-22 Score=181.37 Aligned_cols=126 Identities=18% Similarity=0.186 Sum_probs=107.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAAR 138 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~ 138 (371)
+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+...|+++|.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 457899999999999999999999999 54 47899999999999999988877755599999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 139 RKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 139 ~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
.|+.+++++|+++|++++.+|..|+||||+|+..+....+..+...|...
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 99999999999999999999999999999999877666666666665433
No 74
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=5.7e-22 Score=190.23 Aligned_cols=139 Identities=14% Similarity=0.099 Sum_probs=96.6
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCC---HHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCS---PKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~---~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+ .+.+..++...+++++.+|..|+||||
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH 206 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHH
Confidence 6789999999999999999999999999 55 4789999999999987 566677776545889999999999999
Q ss_pred HHHH----cCCHHHHHHHHhC--------------------CCCCCccCCCCCcHHHHHHHcC--CCCcHhhHHhcCCCh
Q 043128 135 VAAR----RKEPAVLVTLLSK--------------------GGCASETTSDGQTAVAICRRMT--RRKDYIEATKQGQET 188 (371)
Q Consensus 135 ~Aa~----~g~~~iv~~LL~~--------------------Ga~in~~d~~G~TpLh~A~~~~--~~~~v~~~~~~G~t~ 188 (371)
+|+. .|+.+++++|++. |++++.+|..|+||||+|+... -..+++..+..|.||
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~Tp 286 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCH
Confidence 9999 9999999999987 5665555555555555554210 000234444455555
Q ss_pred h---hccCCHHHHHH
Q 043128 189 N---KDRLCIDVLER 200 (371)
Q Consensus 189 l---~~~~~~~ile~ 200 (371)
+ ....+.++++.
T Consensus 287 Lh~A~~~g~~~~v~~ 301 (327)
T 1sw6_A 287 LNIAARLGNISIVDA 301 (327)
T ss_dssp HHHHHHHCCHHHHHH
T ss_pred HHHHHHcCCHHHHHH
Confidence 5 33344555555
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.86 E-value=2.7e-21 Score=181.15 Aligned_cols=127 Identities=21% Similarity=0.144 Sum_probs=114.7
Q ss_pred CCCCCCCCCchHHHHHH-----HcCCHHHHHHHHHCC-C---CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCC
Q 043128 58 EVDPMHATRVRGIHEAL-----DSYDFELLKLLLDES-N---VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDAR 128 (371)
Q Consensus 58 ~~d~~d~~g~TpLh~Aa-----~~g~~e~vk~LL~~g-~---in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~ 128 (371)
..+..+..|.||||+|+ ..++.+++++|++.| . .+..|.||||+|+..|+.+++..|| .+|+++|.+|..
T Consensus 137 ~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll-~~gad~n~~d~~ 215 (276)
T 4hbd_A 137 KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALL-ACEADVNVQDDD 215 (276)
T ss_dssp CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTT
T ss_pred cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCC
Confidence 45567789999999999 678999999999999 3 2467999999999999988877776 669999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 129 GHTVLHVAARRKEPAVLVTLLS-KGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 129 G~TpLh~Aa~~g~~~iv~~LL~-~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..|+...+..+.+++
T Consensus 216 G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 216 GSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999 89999999999999999999999988888877654
No 76
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=5.1e-22 Score=174.30 Aligned_cols=111 Identities=25% Similarity=0.283 Sum_probs=101.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKD-ARGHTVLHVAA 137 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d-~~G~TpLh~Aa 137 (371)
+..|.||||+|+..|+.++++.|++ | ++ |..|.||||+|+..|+.+++..|+ .+|+++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 7 44 578999999999999998877666 6799999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCC
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRR 175 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~ 175 (371)
..|+.+++++|+++|++++.+|.+|+||||+|+..++.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 99999999999999999999999999999999986544
No 77
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=3.3e-21 Score=186.35 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=116.4
Q ss_pred CCCCCchHHHHHHHcC--CHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCC-----ccccCCCCC
Q 043128 62 MHATRVRGIHEALDSY--DFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAG-----LNLKDARGH 130 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g--~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gad-----in~~d~~G~ 130 (371)
.+..|.||||+|+..| +.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|++ +|.+|..|+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMM-DTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-hcccccccccccccCCCCC
Confidence 4668999999999999 999999999999 55 478999999999999999887777 45787 999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 131 TVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 131 TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|...
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999999999999999999999999999999999999999988654
No 78
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.85 E-value=5.6e-21 Score=179.70 Aligned_cols=134 Identities=16% Similarity=0.064 Sum_probs=112.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCC-CcHHHHHHHc
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARG-HTVLHVAARR 139 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G-~TpLh~Aa~~ 139 (371)
+|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+. +|++++.+|..| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHc
Confidence 4899999999999999999999999 55 4789999999999999998877775 599999999999 7999999999
Q ss_pred CCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCC----------cHhhHHhcCCCh-h---hccCCHHHHHH
Q 043128 140 KEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRK----------DYIEATKQGQET-N---KDRLCIDVLER 200 (371)
Q Consensus 140 g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~----------~v~~~~~~G~t~-l---~~~~~~~ile~ 200 (371)
|+.+++++|+++|+++... ..|+||||+|+..|+.. +++..+..|.+| + ....+.++++.
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 9999999999999887433 28999999999988544 445555567776 5 44567888887
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=3.6e-22 Score=177.02 Aligned_cols=121 Identities=8% Similarity=0.001 Sum_probs=104.0
Q ss_pred CCCchHHHHHHHcCCH----HHHHHHHHCC-CCC---CCCchHHHHHHHcCCH-----HHHHHHHhhCCCCccccCCCCC
Q 043128 64 ATRVRGIHEALDSYDF----ELLKLLLDES-NVT---LDDAYALHYAAAYCSP-----KVFKEVLNMDSAGLNLKDARGH 130 (371)
Q Consensus 64 ~~g~TpLh~Aa~~g~~----e~vk~LL~~g-~in---~~G~tpLh~Aa~~g~~-----~~v~~LL~~~gadin~~d~~G~ 130 (371)
..|+||||+|+..|+. +++++|++.| ++| ..|+||||+|+..|+. ..+..+|..+|+++|.+|..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 5799999999999975 5999999999 554 7899999999999863 1244555578999999999999
Q ss_pred -cHHHHHHHcCC-----HHHHHHHHh-CCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhc
Q 043128 131 -TVLHVAARRKE-----PAVLVTLLS-KGGCASETTSDGQTAVAICRRMTRRKDYIEATKQ 184 (371)
Q Consensus 131 -TpLh~Aa~~g~-----~~iv~~LL~-~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~ 184 (371)
||||+|+..+. .+++++|++ +|++++.+|..|+||||+|+..++...+..+..+
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 99999999553 569999999 9999999999999999999999988888776654
No 80
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.85 E-value=7.6e-21 Score=185.51 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=85.3
Q ss_pred CCCCCCchHHHHHHHcC---CHHHHHHHHHCC-CCC-----------CCCchHHHHHHHcCCHHHHHHHHhhCCCCcccc
Q 043128 61 PMHATRVRGIHEALDSY---DFELLKLLLDES-NVT-----------LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLK 125 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g---~~e~vk~LL~~g-~in-----------~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~ 125 (371)
..+..|.||||+|+..+ +.+++++|++.| +++ ..|.||||+|+..|+.+++..|+...|+++|.+
T Consensus 230 ~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~ 309 (373)
T 2fo1_E 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ 309 (373)
T ss_dssp CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCC
T ss_pred hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCc
Confidence 34556777777777666 667777777766 433 256677777777777666666665555777777
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCC
Q 043128 126 DARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 186 (371)
Q Consensus 126 d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~ 186 (371)
|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...+..+..+|.
T Consensus 310 d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 7777777777777777777777777777777777777777777777776666666666553
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=6.1e-22 Score=175.57 Aligned_cols=135 Identities=12% Similarity=0.010 Sum_probs=111.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCC--CCC-CCCchHHHHHHHcCCHH---HHHHHHhhCCCCccccCCCCCcHHHHHHHc
Q 043128 66 RVRGIHEALDSYDFELLKLLLDES--NVT-LDDAYALHYAAAYCSPK---VFKEVLNMDSAGLNLKDARGHTVLHVAARR 139 (371)
Q Consensus 66 g~TpLh~Aa~~g~~e~vk~LL~~g--~in-~~G~tpLh~Aa~~g~~~---~v~~LL~~~gadin~~d~~G~TpLh~Aa~~ 139 (371)
++++||.|++.|+.+.++.++..+ ..+ ..|+||||+|+..|+.+ .+..+|..+|+++|.+|..|+||||+|+..
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 578999999999999999999988 334 67999999999999754 245555578999999999999999999999
Q ss_pred CC------HHHHHHHHhCCCCCCccCCCCC-cHHHHHHHcC----------------CCCcHhhHHhcCCChh---hccC
Q 043128 140 KE------PAVLVTLLSKGGCASETTSDGQ-TAVAICRRMT----------------RRKDYIEATKQGQETN---KDRL 193 (371)
Q Consensus 140 g~------~~iv~~LL~~Ga~in~~d~~G~-TpLh~A~~~~----------------~~~~v~~~~~~G~t~l---~~~~ 193 (371)
|+ .+++++|+++|+++|.+|..|+ ||||+|+..+ ++++++..+..|+||+ ...+
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 87 5789999999999999999999 9999998843 5677777777777777 3334
Q ss_pred CHHHHHH
Q 043128 194 CIDVLER 200 (371)
Q Consensus 194 ~~~ile~ 200 (371)
..++++.
T Consensus 166 ~~~~v~~ 172 (186)
T 3t8k_A 166 KPIALKM 172 (186)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 4444444
No 82
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=2.5e-21 Score=178.16 Aligned_cols=110 Identities=25% Similarity=0.286 Sum_probs=100.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHHHHH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKD-ARGHTVLHVAA 137 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d-~~G~TpLh~Aa 137 (371)
+..|.||||+|+..|+.+++++|++ | ++ |..|.||||+|+..|+.+++..|| .+|+++|.++ ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHH
Confidence 3479999999999999999999999 7 54 478999999999999999877666 6799999998 88999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTR 174 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~ 174 (371)
..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999997543
No 83
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=2.3e-21 Score=177.40 Aligned_cols=123 Identities=13% Similarity=0.044 Sum_probs=59.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC--CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV--TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKE 141 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i--n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~ 141 (371)
.|.||||.|+..|+.+.++.|+++| ++ +..|.||||+|+..|+.+++..|| ..|+++|.+|..|+||||+|+..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4666666666666666666666666 33 345566666666666666555544 4466666666666666666666666
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 142 PAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 142 ~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
.+++++|+++|++++.+|..|+||||+|+..|+...+..+.+.|.++
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 66666666666666666666666666666666655555555555443
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=5.1e-21 Score=175.12 Aligned_cols=123 Identities=19% Similarity=0.146 Sum_probs=110.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHc
Q 043128 64 ATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARR 139 (371)
Q Consensus 64 ~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~ 139 (371)
..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|+++|.+|..|+||||+|+..
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-QFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHc
Confidence 47899999999999999999999999 55 478999999999999999887777 55999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCccCCCCC-cHHHHH--HHcCCCCcHhhHHhcCCC
Q 043128 140 KEPAVLVTLLSKGGCASETTSDGQ-TAVAIC--RRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 140 g~~~iv~~LL~~Ga~in~~d~~G~-TpLh~A--~~~~~~~~v~~~~~~G~t 187 (371)
|+.+++++|+++|++++.++..|. ||||+| +..|+...+..+...|..
T Consensus 114 ~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 114 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhc
Confidence 999999999999999999998887 999999 667778888887776643
No 85
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.83 E-value=2.2e-20 Score=182.26 Aligned_cols=141 Identities=19% Similarity=0.194 Sum_probs=118.1
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCC---CCccccCCCCCc
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDS---AGLNLKDARGHT 131 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~g---adin~~d~~G~T 131 (371)
++..|..|.||||+|+..|+.++|++|++.| ++ |..|.||||+|+..|+.+++..|+ .++ ++++..|..|+|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~d~~g~t 237 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML-NSTKLKGDIEELDRNGMT 237 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHT-TSHHHHHTTSCCCTTSCC
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH-hcCccccChhhcCCCCCC
Confidence 4556779999999999999999999999999 54 478999999999999999877776 455 799999999999
Q ss_pred HHHHHHHcC---CHHHHHHHHhCCCCCCc--------cCCCCCcHHHHHHHcCCCC-----------cHhhHHhcCCChh
Q 043128 132 VLHVAARRK---EPAVLVTLLSKGGCASE--------TTSDGQTAVAICRRMTRRK-----------DYIEATKQGQETN 189 (371)
Q Consensus 132 pLh~Aa~~g---~~~iv~~LL~~Ga~in~--------~d~~G~TpLh~A~~~~~~~-----------~v~~~~~~G~t~l 189 (371)
|||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.. +++..+..|.||+
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999999998 89999999999999986 6779999999999988644 4444455566666
Q ss_pred ---hccCCHHHHHH
Q 043128 190 ---KDRLCIDVLER 200 (371)
Q Consensus 190 ---~~~~~~~ile~ 200 (371)
...++.++++.
T Consensus 318 ~~A~~~g~~~iv~~ 331 (373)
T 2fo1_E 318 MLAAQEGRIEVVMY 331 (373)
T ss_dssp HHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 34456666666
No 86
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=1.3e-19 Score=173.42 Aligned_cols=117 Identities=23% Similarity=0.191 Sum_probs=85.6
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHH
Q 043128 64 ATRVRGIHEALDSYDFELLKLLLDES-NVT----LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAAR 138 (371)
Q Consensus 64 ~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in----~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~ 138 (371)
.+|.|+||.|++.|++++|++||+.| ++| ..|+||||+|+..|+.+++..|| .+|++++.++..+.+|++.++.
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll-~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL-RHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHH-HcCCchhhhccCCCchhHHHHh
Confidence 35788999999999999999999998 665 35889999999999988776666 5688777777666666666666
Q ss_pred cCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhH
Q 043128 139 RKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEA 181 (371)
Q Consensus 139 ~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~ 181 (371)
.+...++..++.++++++.+|..|+||||+|+..|+...+..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~l 144 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 144 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHH
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHH
Confidence 6666666666666666666666666666666666544433333
No 87
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.83 E-value=5.5e-20 Score=165.64 Aligned_cols=108 Identities=16% Similarity=0.129 Sum_probs=54.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
.|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++..|+ .+|++++.++..|.||||+|+..+
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLI-AKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHH-hcCCCccccCCCCCcHHHHHHHhC
Confidence 3555555555555555555555554 22 244555555555555544444433 335555555555555555555433
Q ss_pred C-HHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcC
Q 043128 141 E-PAVLVTLLSKGGCASETTS-DGQTAVAICRRMT 173 (371)
Q Consensus 141 ~-~~iv~~LL~~Ga~in~~d~-~G~TpLh~A~~~~ 173 (371)
+ .+++++|++.|++++..+. .|.||||+|+..|
T Consensus 154 ~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 154 HSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp CSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence 3 4455555555555555554 5555555555544
No 88
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=9.7e-20 Score=141.95 Aligned_cols=89 Identities=34% Similarity=0.399 Sum_probs=62.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcC
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRK 140 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g 140 (371)
+|+||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcC
Confidence 3677777777777777777777777 43 356777777777777766655554 457777777777777777777777
Q ss_pred CHHHHHHHHhCCCC
Q 043128 141 EPAVLVTLLSKGGC 154 (371)
Q Consensus 141 ~~~iv~~LL~~Ga~ 154 (371)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 77777777777764
No 89
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=9.4e-20 Score=171.38 Aligned_cols=123 Identities=20% Similarity=0.234 Sum_probs=111.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHhhCCCCccccCCCCCc
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---------TLDDAYALHYAAAY---CSPKVFKEVLNMDSAGLNLKDARGHT 131 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---------n~~G~tpLh~Aa~~---g~~~~v~~LL~~~gadin~~d~~G~T 131 (371)
...++|+.|+..|+.+.++.+++.| ++ +..|.||||+|+.. |+.+++..|+ .+|+++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCC
Confidence 3467999999999999999999999 43 46799999999999 7878776666 569999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCCh
Q 043128 132 VLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 188 (371)
Q Consensus 132 pLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~ 188 (371)
|||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+...+..+.+.|...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999988877543
No 90
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=2.5e-20 Score=150.61 Aligned_cols=104 Identities=22% Similarity=0.238 Sum_probs=93.8
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAA 137 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa 137 (371)
.|.+|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT-TTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHH
Confidence 4679999999999999999999999999 54 578999999999999988766665 679999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCccCCCCCcHH
Q 043128 138 RRKEPAVLVTLLSKGGCASETTSDGQTAV 166 (371)
Q Consensus 138 ~~g~~~iv~~LL~~Ga~in~~d~~G~TpL 166 (371)
..|+.+++++|+++|++++.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999984
No 91
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=9.8e-20 Score=141.92 Aligned_cols=92 Identities=28% Similarity=0.319 Sum_probs=85.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC
Q 043128 94 DDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 94 ~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~ 173 (371)
+|+||||+|+..|+.+++..|+ ..|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 5899999999999999877776 679999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHhhHHhcCC
Q 043128 174 RRKDYIEATKQGQ 186 (371)
Q Consensus 174 ~~~~v~~~~~~G~ 186 (371)
+...+..+.+.|.
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 9999998888875
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.3e-19 Score=183.74 Aligned_cols=124 Identities=20% Similarity=0.224 Sum_probs=111.3
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHH---cCCHHHHHHHHhhCCCCccccCCCCCcH
Q 043128 66 RVRGIHEALDSYDFELLKLLLDES-NV---------TLDDAYALHYAAA---YCSPKVFKEVLNMDSAGLNLKDARGHTV 132 (371)
Q Consensus 66 g~TpLh~Aa~~g~~e~vk~LL~~g-~i---------n~~G~tpLh~Aa~---~g~~~~v~~LL~~~gadin~~d~~G~Tp 132 (371)
..+.||.|+..|+.+.++.|++.| ++ +..|.||||+|+. .|+.+++..|| .+|+++|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcH
Confidence 347899999999999999999999 54 4579999999977 88888877776 5699999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCChhh
Q 043128 133 LHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 190 (371)
Q Consensus 133 Lh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l~ 190 (371)
||+|+..|+.+++++|+++||+++.+|.+|+||||+|+..|+...+..+.+.|.++..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999977663
No 93
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=5.7e-20 Score=156.87 Aligned_cols=108 Identities=17% Similarity=0.075 Sum_probs=82.7
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCch-HHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAY-ALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~t-pLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
+..+..|.||||+|+ .|+.+++++|++.| ++ |..|.| |||+|+..|+.+++..|+ .+|+++|.+|..|+||||
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~ 116 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVRDAWGRLPVD 116 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH-HHTCCSSCCCTTCCCHHH
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHH-HcCCCCcccCCCCCCHHH
Confidence 345679999999996 99999999999999 55 467898 999999999999887777 559999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHH
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAIC 169 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A 169 (371)
+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 117 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 117 LAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999999999999999999998744
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=7e-21 Score=173.83 Aligned_cols=129 Identities=12% Similarity=0.115 Sum_probs=111.9
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccC-CCCCcHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKD-ARGHTVLH 134 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d-~~G~TpLh 134 (371)
+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|++++.++ ..|+||||
T Consensus 48 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~ 126 (229)
T 2vge_A 48 SQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV-QHGAAIFATTLSDGATAFE 126 (229)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCSSTTCCTGG
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCCHHH
Confidence 345779999999999999999999999999 55 478999999999999998877776 6799999996 69999999
Q ss_pred HH--HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-------CCCc--HhhHHhcCCChh
Q 043128 135 VA--ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMT-------RRKD--YIEATKQGQETN 189 (371)
Q Consensus 135 ~A--a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~-------~~~~--v~~~~~~G~t~l 189 (371)
+| +..|+.+++++|+++|++++.+|..|.||++.++..+ .+++ ++..+..|.||+
T Consensus 127 ~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL 192 (229)
T 2vge_A 127 KCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDW 192 (229)
T ss_dssp GCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSE
T ss_pred HHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHH
Confidence 99 9999999999999999999999999999998655432 3444 666777788887
No 95
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.80 E-value=4.2e-20 Score=177.16 Aligned_cols=114 Identities=20% Similarity=0.132 Sum_probs=89.9
Q ss_pred CCCCCCCchHHHHHHHcCC---HHHHHHHHHCC-----CCCCCCchHHHHHHH----cCCHHHHHHHHhhC---------
Q 043128 60 DPMHATRVRGIHEALDSYD---FELLKLLLDES-----NVTLDDAYALHYAAA----YCSPKVFKEVLNMD--------- 118 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~---~e~vk~LL~~g-----~in~~G~tpLh~Aa~----~g~~~~v~~LL~~~--------- 118 (371)
+..+..|.||||+|+..|+ .++++.|++.+ ..|..|+||||+|+. .|+.+++..++...
T Consensus 158 n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~ 237 (327)
T 1sw6_A 158 LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237 (327)
T ss_dssp TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG
T ss_pred CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc
Confidence 3456689999999999988 56677777665 345889999999998 88888777776431
Q ss_pred ----------CC-------------------------CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCC
Q 043128 119 ----------SA-------------------------GLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQ 163 (371)
Q Consensus 119 ----------ga-------------------------din~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~ 163 (371)
|+ ++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+
T Consensus 238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 238 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp CCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 22 5778888889999999999999999999999999999999999
Q ss_pred cHHHHHHHcC
Q 043128 164 TAVAICRRMT 173 (371)
Q Consensus 164 TpLh~A~~~~ 173 (371)
||||+|+..|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999887653
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=2e-19 Score=175.95 Aligned_cols=121 Identities=18% Similarity=0.130 Sum_probs=110.6
Q ss_pred CCCchHHHHHHHc-CCHHHHHHHHHCC-CCC-----CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 64 ATRVRGIHEALDS-YDFELLKLLLDES-NVT-----LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 64 ~~g~TpLh~Aa~~-g~~e~vk~LL~~g-~in-----~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+.|+||+|+.. |+.++++.|++.| ++| ..|.||||+|+..|+.+++..|| .+|+++|.+|..|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHH
Confidence 3567899999999 9999999999999 554 67899999999999988877666 66999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 137 ARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
+..|+.+++++|+++|++++.+|.+|.||||+|+..++...+..+...|
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999988888877655
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.79 E-value=3.1e-19 Score=169.76 Aligned_cols=120 Identities=20% Similarity=0.239 Sum_probs=108.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHhhCCCCccccCCCCCc
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NV---------TLDDAYALHYAAAY---CSPKVFKEVLNMDSAGLNLKDARGHT 131 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---------n~~G~tpLh~Aa~~---g~~~~v~~LL~~~gadin~~d~~G~T 131 (371)
.+.++||.|+..|+.+.++.|++.| ++ +..|.||||+|+.. |+.+++..|| .+|+++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCC
Confidence 4567899999999999999999999 43 56899999999997 7888777766 559999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcC
Q 043128 132 VLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQG 185 (371)
Q Consensus 132 pLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G 185 (371)
|||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..++...+..+...|
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999988887777654
No 98
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.76 E-value=1.5e-17 Score=138.46 Aligned_cols=92 Identities=17% Similarity=0.181 Sum_probs=83.3
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~tpl~~ 119 (136)
T 2jab_A 41 NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL-KHGADVNAQDKFGKTAFDI 119 (136)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcCcCCCCCCHHHH
Confidence 445679999999999999999999999999 54 478999999999999988877776 6699999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC
Q 043128 136 AARRKEPAVLVTLLSKG 152 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~G 152 (371)
|+..|+.+++++|+++|
T Consensus 120 A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 120 SIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTTCHHHHHHHHHC-
T ss_pred HHHCCCHHHHHHHHHcC
Confidence 99999999999999986
No 99
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.75 E-value=2.2e-18 Score=143.59 Aligned_cols=93 Identities=17% Similarity=0.099 Sum_probs=84.6
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CCC---CC-CchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 60 DPMHATRVRGIHEALDSYDFELLKLLLDES-NVT---LD-DAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 60 d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~in---~~-G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
+..+..|.||||+|+. |+.+++++|++.| +++ .. |.||||+|+..|+.+++..|+ .+|++++.+|..|+||||
T Consensus 39 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 39 NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RAGARLDVCDAWGRLPVD 116 (136)
T ss_dssp TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTCCCCCCCSSSSSCHHH
T ss_pred CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHH
Confidence 3456799999999999 9999999999999 554 66 999999999999998877776 679999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCC
Q 043128 135 VAARRKEPAVLVTLLSKGGC 154 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~ 154 (371)
+|+..|+.+++++|+++|||
T Consensus 117 ~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 117 LAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999986
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.75 E-value=4.3e-18 Score=139.16 Aligned_cols=96 Identities=16% Similarity=0.051 Sum_probs=84.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHH
Q 043128 92 TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRR 171 (371)
Q Consensus 92 n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~ 171 (371)
+..|.||||+|+..|+.+++..++ ..|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 467899999999999999888877 5689999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHhhHHhcCCCh
Q 043128 172 MTRRKDYIEATKQGQET 188 (371)
Q Consensus 172 ~~~~~~v~~~~~~G~t~ 188 (371)
.++...+..+.+.|.++
T Consensus 83 ~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADK 99 (123)
T ss_dssp HTCHHHHHHHHHTTCCT
T ss_pred cCCHHHHHHHHHcCCCC
Confidence 98766666666666544
No 101
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.75 E-value=5.7e-18 Score=140.90 Aligned_cols=98 Identities=18% Similarity=0.126 Sum_probs=88.0
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128 91 VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170 (371)
Q Consensus 91 in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~ 170 (371)
.|..|.||||+|+..|+.+++..|+ ..|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 4678999999999999999887777 569999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcHhhHHhcCCChh
Q 043128 171 RMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 171 ~~~~~~~v~~~~~~G~t~l 189 (371)
..++...+..+.+.|.++.
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~ 103 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRN 103 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9997777766666665443
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.75 E-value=9.9e-19 Score=166.27 Aligned_cols=107 Identities=20% Similarity=0.237 Sum_probs=90.9
Q ss_pred CCCCCchHHHHHHHc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHH
Q 043128 62 MHATRVRGIHEALDS---YDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLH 134 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~---g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh 134 (371)
.+..|.||||+|+.. |+.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|++++.+|..|+||||
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALD 264 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCCSCCCTTSCCHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHH
Confidence 467899999999997 8999999999999 55 478999999999999998877666 679999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCC
Q 043128 135 VAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRR 175 (371)
Q Consensus 135 ~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~ 175 (371)
+|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999986 589999999998764
No 103
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.75 E-value=2e-17 Score=134.18 Aligned_cols=93 Identities=32% Similarity=0.378 Sum_probs=85.3
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHH
Q 043128 61 PMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVA 136 (371)
Q Consensus 61 ~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A 136 (371)
..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|
T Consensus 30 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 30 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHH
T ss_pred CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH-HcCCCCcccCCCCCCHHHHH
Confidence 35668999999999999999999999999 54 478999999999999998877776 67999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCC
Q 043128 137 ARRKEPAVLVTLLSKGGC 154 (371)
Q Consensus 137 a~~g~~~iv~~LL~~Ga~ 154 (371)
+..|+.+++++|+++||+
T Consensus 109 ~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 109 ARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHTTCHHHHHHHHHHTCC
T ss_pred HHcCcHHHHHHHHHcCCC
Confidence 999999999999999986
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=9.7e-18 Score=135.27 Aligned_cols=98 Identities=24% Similarity=0.336 Sum_probs=89.7
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128 91 VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170 (371)
Q Consensus 91 in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~ 170 (371)
.|.+|.||||+|+..|+.+++..|+ .+|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4688999999999999988877766 679999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcHhhHHhcCCChh
Q 043128 171 RMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 171 ~~~~~~~v~~~~~~G~t~l 189 (371)
..++...+..+.+.|.++.
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHH
T ss_pred HCCCHHHHHHHHHcCCCCC
Confidence 9998888888888877655
No 105
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=2.1e-17 Score=133.00 Aligned_cols=87 Identities=25% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHH
Q 043128 91 VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETTSDGQTAVAICR 170 (371)
Q Consensus 91 in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~ 170 (371)
.+.+|.||||+|+..|+.+++..|+ .+|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 3455666666666666666555554 346666666666666666666666666666666666666666666666666666
Q ss_pred HcCCCCcH
Q 043128 171 RMTRRKDY 178 (371)
Q Consensus 171 ~~~~~~~v 178 (371)
..|+...+
T Consensus 99 ~~~~~~~~ 106 (110)
T 2zgd_A 99 DNGNEDLA 106 (110)
T ss_dssp HHTCHHHH
T ss_pred HcCCHHHH
Confidence 66554443
No 106
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.70 E-value=1.1e-18 Score=171.20 Aligned_cols=136 Identities=10% Similarity=-0.114 Sum_probs=110.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHCCC-------CCCCCchHHHHHHHcCCHHHHHHHHhhCCCC---ccccCCCCCcH
Q 043128 63 HATRVRGIHEALDSYDFELLKLLLDESN-------VTLDDAYALHYAAAYCSPKVFKEVLNMDSAG---LNLKDARGHTV 132 (371)
Q Consensus 63 d~~g~TpLh~Aa~~g~~e~vk~LL~~g~-------in~~G~tpLh~Aa~~g~~~~v~~LL~~~gad---in~~d~~G~Tp 132 (371)
+.++.||||+|+..|+.++|++|++.|. +|..|.||||+|+.+|+.++++.|+ .+|++ .+..+.+ +||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll-~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH-HSCTTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH-hCCCCccccccCCCC-CCH
Confidence 3457799999999999999999999982 3457889999999999999887777 66875 2333333 899
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCc--cCCCCCcHHHHHH-HcCCCCcHhhHHhcC---CChh---hccCCHHHHHH
Q 043128 133 LHVAARRKEPAVLVTLLSKGGCASE--TTSDGQTAVAICR-RMTRRKDYIEATKQG---QETN---KDRLCIDVLER 200 (371)
Q Consensus 133 Lh~Aa~~g~~~iv~~LL~~Ga~in~--~d~~G~TpLh~A~-~~~~~~~v~~~~~~G---~t~l---~~~~~~~ile~ 200 (371)
||+|+..|+.+++++|+++|++++. .|..|+||||+|+ ..|+...+..+.+.| .+++ ...++.++++.
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHH
Confidence 9999999999999999999999987 8999999999999 999999998888765 4444 33445566655
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.70 E-value=9.9e-17 Score=162.52 Aligned_cols=103 Identities=20% Similarity=0.269 Sum_probs=83.6
Q ss_pred CCCCchHHHHHHH---cCCHHHHHHHHHCC-CCC---CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHH
Q 043128 63 HATRVRGIHEALD---SYDFELLKLLLDES-NVT---LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHV 135 (371)
Q Consensus 63 d~~g~TpLh~Aa~---~g~~e~vk~LL~~g-~in---~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~ 135 (371)
+..|.||||+|+. .|+.+++++|++.| ++| ..|.||||+|+..|+.+++..|| .+|+++|.+|..|+||||+
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL-KGRALVGTVNEAGETALDI 246 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHH-HTCCCCSCCCTTCCCHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHH
Confidence 6789999999977 89999999999999 554 78999999999999988776666 6799999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc
Q 043128 136 AARRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRM 172 (371)
Q Consensus 136 Aa~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~ 172 (371)
|+..|+.+++++|+++|++++. ||+|.+..+
T Consensus 247 A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHcCCHHHHHHHHHhCCCCCC------Ccceeeccc
Confidence 9999999999999999999987 577766554
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.69 E-value=1.5e-16 Score=149.44 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=86.7
Q ss_pred CCCCCCCCchHHHHHHHc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCc
Q 043128 59 VDPMHATRVRGIHEALDS---YDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHT 131 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~---g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~T 131 (371)
.+..+..|.||||+|+.. |+.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|+++|.+|..|+|
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~d~~g~t 240 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL-RGKASIEIANESGET 240 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCC
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCccCCCCC
Confidence 344578899999999999 8999999999999 55 478999999999999998877666 689999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCC
Q 043128 132 VLHVAARRKEPAVLVTLLSKGGCA 155 (371)
Q Consensus 132 pLh~Aa~~g~~~iv~~LL~~Ga~i 155 (371)
|||+|+..|+.+++++|+++|++.
T Consensus 241 pL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 241 PLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999998853
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.69 E-value=7.8e-19 Score=161.41 Aligned_cols=123 Identities=13% Similarity=0.057 Sum_probs=105.5
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCC-CCCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHH
Q 043128 65 TRVRGIHEALDSYDFELLKLLLDES-NVTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPA 143 (371)
Q Consensus 65 ~g~TpLh~Aa~~g~~e~vk~LL~~g-~in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~ 143 (371)
.+.+++.+++..|+.+.+..+...+ +++..|.||||+|+..|+.+++..||. |+++|.+|..|+||||+|+..|+.+
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~ 91 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDK 91 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred CCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 4566677777777776666666566 666789999999999999998888875 8999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCCCcHhhHHhcCCChh
Q 043128 144 VLVTLLSKGGCASETT-SDGQTAVAICRRMTRRKDYIEATKQGQETN 189 (371)
Q Consensus 144 iv~~LL~~Ga~in~~d-~~G~TpLh~A~~~~~~~~v~~~~~~G~t~l 189 (371)
++++|+++|++++.++ ..|+||||+|+..|+...+..+...|.++.
T Consensus 92 ~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 92 CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138 (244)
T ss_dssp HHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999998 889999999999998777777777776554
No 110
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.68 E-value=6.6e-17 Score=145.46 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=78.7
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHH
Q 043128 59 VDPMHATRVRGIHEALDSYDFELLKLLLDE-S-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVL 133 (371)
Q Consensus 59 ~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~-g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpL 133 (371)
.+..+..|.||||+|+..|+.+++++|++. | ++ |..|.||||+|+..|+.+++..||. +|++++.+|..|+|||
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l 177 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAF 177 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHH
Confidence 344567999999999999999999999998 7 44 5789999999999999998777775 5999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCccCCCCC
Q 043128 134 HVAARRKEPAVLVTLLSKGGCASETTSDGQ 163 (371)
Q Consensus 134 h~Aa~~g~~~iv~~LL~~Ga~in~~d~~G~ 163 (371)
|+|+..|+.++++.|+..|++.+..+..|+
T Consensus 178 ~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 178 DMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHCCSHHHHHHHC-----------------
T ss_pred HHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999888776553
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.9e-16 Score=127.34 Aligned_cols=91 Identities=19% Similarity=0.205 Sum_probs=78.1
Q ss_pred cCCCCCCCCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcH
Q 043128 57 AEVDPMHATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTV 132 (371)
Q Consensus 57 ~~~d~~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~Tp 132 (371)
......+.+|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|+ .+|++++.+|..|+||
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTA 93 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCH
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcH
Confidence 334446789999999999999999999999999 54 578999999999999999877776 5699999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 043128 133 LHVAARRKEPAVLVTL 148 (371)
Q Consensus 133 Lh~Aa~~g~~~iv~~L 148 (371)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999986
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=4.1e-18 Score=167.12 Aligned_cols=118 Identities=14% Similarity=0.012 Sum_probs=103.2
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHCC-C-----CCCCCchHHHHHHHcCCHHHHHHHHhhCCCCccc--cCCCCCcHH
Q 043128 62 MHATRVRGIHEALDSYDFELLKLLLDES-N-----VTLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNL--KDARGHTVL 133 (371)
Q Consensus 62 ~d~~g~TpLh~Aa~~g~~e~vk~LL~~g-~-----in~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~--~d~~G~TpL 133 (371)
.+..|.||||+|+..|+.++|++|++.| + ++..+.||||+|+..|+.++++.|+ .+|++++. .|..|+|||
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll-~~ga~~~~~~~d~~g~TpL 202 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLC-ELAPTEATAMIQAENYYAF 202 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHH-HSCGGGHHHHHHHHHHHHH
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHH-HcCCccchhccCCCCCCHH
Confidence 4567899999999999999999999999 4 2333489999999999999877776 66999888 889999999
Q ss_pred HHHH-HcCCHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCCCcHhhHHhcCCC
Q 043128 134 HVAA-RRKEPAVLVTLLSKGGCASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 187 (371)
Q Consensus 134 h~Aa-~~g~~~iv~~LL~~Ga~in~~d~~G~TpLh~A~~~~~~~~v~~~~~~G~t 187 (371)
|+|+ ..|+.+++++|+++|++ |.||||+|+..|+...+..+.+.|..
T Consensus 203 ~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 203 RWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp HHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 9999 99999999999998853 89999999999999888888877643
No 113
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.65 E-value=2.5e-16 Score=137.82 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=86.8
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCCcHHHHHHH
Q 043128 93 LDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARRKEPAVLVTLLSKGGCASETT-SDGQTAVAICRR 171 (371)
Q Consensus 93 ~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Ga~in~~d-~~G~TpLh~A~~ 171 (371)
..|.||||+|+..|+.+++..+|. |+++|.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 578999999999999998888885 89999999999999999999999999999999999999998 899999999999
Q ss_pred cCCCCcHhhHHhcCCChh
Q 043128 172 MTRRKDYIEATKQGQETN 189 (371)
Q Consensus 172 ~~~~~~v~~~~~~G~t~l 189 (371)
.|+...+..+.+.|.++.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~ 137 (183)
T 3deo_A 120 YVRPEVVEALVELGADIE 137 (183)
T ss_dssp TTCHHHHHHHHHHTCCTT
T ss_pred cCcHHHHHHHHHcCCCCc
Confidence 998777777777776554
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.64 E-value=1.1e-15 Score=149.35 Aligned_cols=109 Identities=18% Similarity=0.197 Sum_probs=81.4
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHhhCCCCccccCCCCCcHHHHHHHc
Q 043128 64 ATRVRGIHEALDSYDFELLKLLLDES-NV---TLDDAYALHYAAAYCSPKVFKEVLNMDSAGLNLKDARGHTVLHVAARR 139 (371)
Q Consensus 64 ~~g~TpLh~Aa~~g~~e~vk~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~Aa~~ 139 (371)
..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++..|| .+|++++.+|..|+||||+|+..
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL-~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFL-KRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HCcCCCCCcCCCCCCHHHHHHHC
Confidence 68999999999999999999999999 55 478999999999999988776666 67999999999999999999999
Q ss_pred CCHHHHHHHHhCC---CCCCccCCCCCcHHHHHHHcC
Q 043128 140 KEPAVLVTLLSKG---GCASETTSDGQTAVAICRRMT 173 (371)
Q Consensus 140 g~~~iv~~LL~~G---a~in~~d~~G~TpLh~A~~~~ 173 (371)
|+.+++++|+.+| ++....+..+.|+++++....
T Consensus 312 g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 312 ANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp TCHHHHHHHHHHHC-----------------------
T ss_pred CCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999875 444556677888988877654
No 115
>3bbo_2 Ribosomal protein L32; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=25.42 E-value=14 Score=25.39 Aligned_cols=23 Identities=35% Similarity=0.457 Sum_probs=17.5
Q ss_pred HHHHhhhhhhhhccCCCCCCCCCCCCCC
Q 043128 344 HVRKAFCQDMASDNRSGPSSSSSAFFVP 371 (371)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (371)
..+|||+-. +|-+++-|.|||+|
T Consensus 27 ~A~KAlSLa-----KSv~tg~sksF~~~ 49 (57)
T 3bbo_2 27 AALKAFSLA-----KSLSTGNSKSFFVR 49 (57)
T ss_dssp SCCCCCCSS-----CTTCCSSCCCCSSS
T ss_pred HHHHHHHHH-----HHHHcCCCcceEee
Confidence 677888664 46778888999986
Done!