Query 043131
Match_columns 592
No_of_seqs 202 out of 727
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 23:15:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zsh_B Della protein GAI; plan 100.0 6.7E-55 2.3E-59 379.1 4.6 105 20-167 6-110 (110)
2 4gek_A TRNA (CMO5U34)-methyltr 97.1 0.011 3.6E-07 59.0 15.1 107 327-458 72-180 (261)
3 3dtn_A Putative methyltransfer 94.9 0.12 3.9E-06 49.0 9.7 176 315-541 33-211 (234)
4 3bkx_A SAM-dependent methyltra 94.1 1.4 4.9E-05 42.4 15.8 129 315-464 33-167 (275)
5 3dlc_A Putative S-adenosyl-L-m 94.0 0.33 1.1E-05 44.7 10.5 111 314-455 33-146 (219)
6 3dp7_A SAM-dependent methyltra 93.6 0.63 2.2E-05 47.9 12.9 117 317-460 171-291 (363)
7 3dh0_A SAM dependent methyltra 93.5 2 6.9E-05 39.8 15.1 113 315-455 27-141 (219)
8 2aot_A HMT, histamine N-methyl 93.4 0.33 1.1E-05 48.0 10.1 118 324-455 51-170 (292)
9 3mcz_A O-methyltransferase; ad 93.1 1.1 3.9E-05 45.2 13.6 117 316-459 169-290 (352)
10 4a6d_A Hydroxyindole O-methylt 93.0 0.47 1.6E-05 48.9 10.7 160 314-541 168-331 (353)
11 1vl5_A Unknown conserved prote 92.1 3.6 0.00012 39.4 15.1 109 316-455 28-138 (260)
12 2ip2_A Probable phenazine-spec 92.1 1.8 6.1E-05 43.4 13.5 115 315-458 158-274 (334)
13 2r3s_A Uncharacterized protein 91.7 2.1 7.2E-05 42.7 13.4 117 315-460 153-275 (335)
14 3i53_A O-methyltransferase; CO 90.9 2.3 7.7E-05 42.8 12.8 114 316-459 160-277 (332)
15 3gwz_A MMCR; methyltransferase 90.8 1.6 5.6E-05 44.8 11.8 117 314-460 191-311 (369)
16 1x19_A CRTF-related protein; m 90.7 2.2 7.5E-05 43.4 12.6 116 314-459 179-298 (359)
17 1qzz_A RDMB, aclacinomycin-10- 90.4 2.1 7.2E-05 43.5 12.1 113 315-457 172-288 (374)
18 4fsd_A Arsenic methyltransfera 89.8 3.8 0.00013 42.4 13.6 112 325-455 83-201 (383)
19 3mgg_A Methyltransferase; NYSG 89.4 1.9 6.7E-05 41.6 10.4 103 324-455 36-140 (276)
20 3p9c_A Caffeic acid O-methyltr 89.2 0.75 2.6E-05 47.5 7.7 110 314-459 189-301 (364)
21 3hnr_A Probable methyltransfer 88.9 1.1 3.8E-05 41.6 8.0 108 315-455 35-143 (220)
22 3f4k_A Putative methyltransfer 88.8 3 0.0001 39.6 11.1 126 299-455 19-148 (257)
23 3reo_A (ISO)eugenol O-methyltr 88.7 0.8 2.7E-05 47.3 7.5 110 314-459 191-303 (368)
24 3htx_A HEN1; HEN1, small RNA m 88.6 1.3 4.4E-05 51.9 9.7 121 317-459 713-837 (950)
25 3vc1_A Geranyl diphosphate 2-C 88.6 5.1 0.00017 39.8 13.1 110 315-455 106-219 (312)
26 3h2b_A SAM-dependent methyltra 88.6 2.5 8.5E-05 38.7 10.1 97 326-455 42-139 (203)
27 3lst_A CALO1 methyltransferase 88.0 1.4 4.9E-05 44.8 8.8 44 315-365 174-217 (348)
28 1xxl_A YCGJ protein; structura 87.7 19 0.00064 34.0 16.2 113 315-458 11-126 (239)
29 3sm3_A SAM-dependent methyltra 87.4 1.3 4.5E-05 41.1 7.4 106 326-459 31-144 (235)
30 1nkv_A Hypothetical protein YJ 87.3 8.9 0.0003 36.2 13.4 110 315-455 26-138 (256)
31 3ujc_A Phosphoethanolamine N-m 86.8 2.9 9.8E-05 39.7 9.6 122 305-455 35-157 (266)
32 4htf_A S-adenosylmethionine-de 84.8 17 0.00057 35.2 14.2 108 317-455 61-171 (285)
33 3jwg_A HEN1, methyltransferase 84.7 5.3 0.00018 37.0 10.1 117 316-459 20-143 (219)
34 3bus_A REBM, methyltransferase 82.4 22 0.00075 33.9 13.8 111 315-455 51-164 (273)
35 2qe6_A Uncharacterized protein 82.4 29 0.00098 34.2 15.0 107 327-458 79-198 (274)
36 3jwh_A HEN1; methyltransferase 81.8 9.2 0.00032 35.4 10.5 114 317-457 21-141 (217)
37 1xtp_A LMAJ004091AAA; SGPP, st 81.6 7.4 0.00025 36.7 9.9 113 314-455 82-195 (254)
38 2g72_A Phenylethanolamine N-me 81.5 4.8 0.00016 39.4 8.8 23 520-542 232-254 (289)
39 3l8d_A Methyltransferase; stru 81.4 14 0.00048 34.4 11.8 97 326-455 54-151 (242)
40 1tw3_A COMT, carminomycin 4-O- 81.1 6.3 0.00022 39.8 9.8 114 315-458 173-290 (360)
41 3e23_A Uncharacterized protein 80.6 8.1 0.00028 35.5 9.6 96 326-456 44-140 (211)
42 4dcm_A Ribosomal RNA large sub 80.0 7 0.00024 40.7 9.9 119 313-456 210-333 (375)
43 3m70_A Tellurite resistance pr 80.0 10 0.00035 36.7 10.6 109 317-455 112-221 (286)
44 3ofk_A Nodulation protein S; N 79.8 7.6 0.00026 35.8 9.2 110 316-455 42-152 (216)
45 3ocj_A Putative exported prote 79.8 13 0.00045 36.6 11.4 104 326-455 119-225 (305)
46 3giw_A Protein of unknown func 79.3 12 0.0004 38.1 10.9 137 298-455 47-198 (277)
47 2p35_A Trans-aconitate 2-methy 79.2 15 0.00051 34.6 11.2 106 316-455 24-130 (259)
48 1dus_A MJ0882; hypothetical pr 78.5 8.6 0.00029 34.1 8.8 112 314-456 41-156 (194)
49 3kkz_A Uncharacterized protein 77.3 20 0.00067 34.3 11.6 111 314-455 34-148 (267)
50 3g5l_A Putative S-adenosylmeth 77.2 24 0.00082 33.3 12.0 113 312-456 31-144 (253)
51 3hem_A Cyclopropane-fatty-acyl 77.1 29 0.001 33.9 13.0 112 315-455 62-181 (302)
52 2vdw_A Vaccinia virus capping 76.7 32 0.0011 34.5 13.3 110 326-455 49-167 (302)
53 3bgv_A MRNA CAP guanine-N7 met 75.7 24 0.00081 34.8 12.0 115 325-455 34-153 (313)
54 3ccf_A Cyclopropane-fatty-acyl 75.2 21 0.0007 34.5 11.1 106 315-456 47-153 (279)
55 1wzn_A SAM-dependent methyltra 74.9 18 0.00062 34.0 10.5 112 317-457 33-145 (252)
56 1fp2_A Isoflavone O-methyltran 74.1 11 0.00039 38.0 9.3 32 326-364 189-220 (352)
57 3hm2_A Precorrin-6Y C5,15-meth 73.8 33 0.0011 30.0 11.4 61 315-390 15-75 (178)
58 3dli_A Methyltransferase; PSI- 73.2 5.1 0.00018 37.8 6.1 96 326-455 42-138 (240)
59 1y8c_A S-adenosylmethionine-de 72.5 17 0.00059 33.6 9.5 103 325-456 37-141 (246)
60 1ve3_A Hypothetical protein PH 71.9 33 0.0011 31.4 11.2 101 326-455 39-140 (227)
61 4e2x_A TCAB9; kijanose, tetron 71.4 7.2 0.00025 40.4 7.2 109 316-456 98-207 (416)
62 2xvm_A Tellurite resistance pr 71.4 38 0.0013 30.2 11.3 110 315-454 22-133 (199)
63 2o57_A Putative sarcosine dime 70.7 39 0.0013 32.7 12.0 114 315-458 68-189 (297)
64 3p9n_A Possible methyltransfer 70.6 15 0.00051 33.3 8.4 109 327-462 46-158 (189)
65 3lcc_A Putative methyl chlorid 70.0 24 0.00082 32.9 9.9 101 327-455 68-169 (235)
66 2yxd_A Probable cobalt-precorr 69.2 15 0.00051 32.3 7.9 103 316-455 26-129 (183)
67 3eey_A Putative rRNA methylase 68.6 25 0.00084 31.8 9.4 108 327-455 24-137 (197)
68 3g2m_A PCZA361.24; SAM-depende 68.5 10 0.00034 37.2 7.2 115 315-456 73-189 (299)
69 1fp1_D Isoliquiritigenin 2'-O- 67.3 5.4 0.00018 40.9 5.1 43 315-364 198-241 (372)
70 3uwp_A Histone-lysine N-methyl 66.6 25 0.00087 37.9 10.3 122 311-455 159-286 (438)
71 1kpg_A CFA synthase;, cyclopro 65.5 22 0.00075 34.3 8.9 110 315-455 54-166 (287)
72 3fzg_A 16S rRNA methylase; met 65.4 17 0.00057 35.4 7.8 108 317-455 43-150 (200)
73 2p7i_A Hypothetical protein; p 65.2 21 0.00071 33.0 8.3 93 328-455 45-139 (250)
74 2esr_A Methyltransferase; stru 64.0 13 0.00043 33.1 6.4 106 326-461 32-142 (177)
75 3g5t_A Trans-aconitate 3-methy 63.7 39 0.0013 32.9 10.4 111 324-455 35-147 (299)
76 3r0q_C Probable protein argini 63.2 36 0.0012 35.1 10.5 144 315-487 53-206 (376)
77 3i9f_A Putative type 11 methyl 63.0 39 0.0013 29.6 9.4 102 316-455 8-110 (170)
78 3ou2_A SAM-dependent methyltra 63.0 46 0.0016 30.1 10.2 108 314-455 34-144 (218)
79 1zs4_A Regulatory protein CII; 62.3 2.8 9.6E-05 35.5 1.5 24 38-61 52-75 (83)
80 3u81_A Catechol O-methyltransf 61.8 18 0.00062 33.7 7.3 109 327-459 60-172 (221)
81 3cgg_A SAM-dependent methyltra 61.4 29 0.001 30.6 8.3 39 316-364 38-76 (195)
82 2qn6_B Translation initiation 61.3 4.8 0.00016 34.5 2.8 42 353-394 50-91 (93)
83 3d2l_A SAM-dependent methyltra 60.6 47 0.0016 30.7 9.9 109 317-456 27-136 (243)
84 3njr_A Precorrin-6Y methylase; 59.7 88 0.003 28.9 11.6 103 316-455 46-152 (204)
85 3g07_A 7SK snRNA methylphospha 59.6 13 0.00043 36.8 6.0 56 316-382 35-92 (292)
86 3thr_A Glycine N-methyltransfe 59.1 13 0.00046 35.9 6.0 120 317-456 49-174 (293)
87 2yqz_A Hypothetical protein TT 58.6 73 0.0025 29.8 11.0 102 324-456 38-140 (263)
88 3q7e_A Protein arginine N-meth 57.9 19 0.00063 36.8 7.1 102 327-456 68-172 (349)
89 2fpo_A Methylase YHHF; structu 57.6 28 0.00097 32.2 7.8 103 327-459 56-162 (202)
90 2pjd_A Ribosomal RNA small sub 57.1 11 0.00039 38.1 5.3 116 314-456 185-302 (343)
91 3mti_A RRNA methylase; SAM-dep 57.0 34 0.0012 30.5 8.0 103 328-455 25-133 (185)
92 1zg3_A Isoflavanone 4'-O-methy 56.9 14 0.00049 37.3 6.0 42 316-364 182-225 (358)
93 3ege_A Putative methyltransfer 56.7 29 0.001 33.2 8.0 41 315-364 24-64 (261)
94 3pfg_A N-methyltransferase; N, 56.4 23 0.0008 33.6 7.1 98 326-456 51-150 (263)
95 2zfu_A Nucleomethylin, cerebra 55.8 25 0.00087 32.2 7.1 18 523-540 158-175 (215)
96 3frh_A 16S rRNA methylase; met 54.7 48 0.0016 33.3 9.2 99 326-455 106-204 (253)
97 3e8s_A Putative SAM dependent 54.4 41 0.0014 30.5 8.2 44 312-364 39-82 (227)
98 3dmg_A Probable ribosomal RNA 54.4 67 0.0023 33.4 10.7 105 325-456 233-339 (381)
99 3mq2_A 16S rRNA methyltransfer 53.0 24 0.00083 32.5 6.5 116 317-456 19-139 (218)
100 3m33_A Uncharacterized protein 52.9 28 0.00095 32.6 6.9 29 327-364 50-78 (226)
101 1uwv_A 23S rRNA (uracil-5-)-me 50.8 1.2E+02 0.0042 31.7 12.2 109 317-455 278-387 (433)
102 2kw5_A SLR1183 protein; struct 50.4 1.4E+02 0.0048 26.7 11.5 98 328-456 32-130 (202)
103 2y1w_A Histone-arginine methyl 50.3 50 0.0017 33.5 8.8 113 315-456 40-154 (348)
104 3cc8_A Putative methyltransfer 49.2 69 0.0024 29.0 8.9 106 314-455 22-128 (230)
105 1yzh_A TRNA (guanine-N(7)-)-me 48.9 64 0.0022 29.7 8.7 112 326-458 42-157 (214)
106 2ift_A Putative methylase HI07 48.7 64 0.0022 29.7 8.6 106 327-461 55-167 (201)
107 2gb4_A Thiopurine S-methyltran 48.7 72 0.0025 31.0 9.4 31 325-364 68-98 (252)
108 3lcv_B Sisomicin-gentamicin re 48.4 42 0.0015 34.2 7.7 132 316-484 125-258 (281)
109 1vlm_A SAM-dependent methyltra 48.0 1.3E+02 0.0046 27.5 10.8 23 521-543 165-187 (219)
110 3b3j_A Histone-arginine methyl 47.4 47 0.0016 35.8 8.5 114 315-457 148-263 (480)
111 1xj5_A Spermidine synthase 1; 46.3 92 0.0031 31.8 10.1 134 327-482 122-257 (334)
112 3bkw_A MLL3908 protein, S-aden 45.6 96 0.0033 28.5 9.4 109 315-455 33-142 (243)
113 2fk8_A Methoxy mycolic acid sy 45.5 1.7E+02 0.0057 28.5 11.6 110 315-455 80-192 (318)
114 2efj_A 3,7-dimethylxanthine me 45.3 2.8E+02 0.0096 29.1 13.8 102 326-434 53-166 (384)
115 3bwc_A Spermidine synthase; SA 44.1 86 0.0029 31.2 9.3 113 327-458 97-211 (304)
116 2ex4_A Adrenal gland protein A 43.6 1E+02 0.0035 28.7 9.4 103 325-455 79-183 (241)
117 2a14_A Indolethylamine N-methy 43.0 1.7E+02 0.0059 27.9 11.0 39 417-455 156-195 (263)
118 3iv6_A Putative Zn-dependent a 41.3 29 0.001 34.4 5.3 52 315-379 35-86 (261)
119 1ri5_A MRNA capping enzyme; me 40.4 68 0.0023 30.6 7.6 105 326-455 65-172 (298)
120 2jjq_A Uncharacterized RNA met 39.8 1.5E+02 0.0053 31.2 10.9 94 328-456 293-386 (425)
121 3gu3_A Methyltransferase; alph 39.3 2.7E+02 0.0091 26.7 12.9 106 324-458 21-128 (284)
122 2pxx_A Uncharacterized protein 39.1 46 0.0016 29.9 5.9 44 325-380 42-85 (215)
123 2p8j_A S-adenosylmethionine-de 38.6 1.5E+02 0.0052 26.5 9.4 101 327-455 25-126 (209)
124 3p2e_A 16S rRNA methylase; met 37.5 62 0.0021 30.7 6.8 33 325-364 24-56 (225)
125 4hg2_A Methyltransferase type 36.0 2.7E+02 0.0092 27.0 11.3 99 328-464 42-143 (257)
126 2i62_A Nicotinamide N-methyltr 36.0 1.3E+02 0.0044 28.0 8.7 47 322-380 53-99 (265)
127 1inl_A Spermidine synthase; be 35.6 1.6E+02 0.0053 29.2 9.6 136 327-485 92-230 (296)
128 1u2z_A Histone-lysine N-methyl 33.6 2.1E+02 0.0072 30.5 10.7 118 315-455 232-357 (433)
129 3e05_A Precorrin-6Y C5,15-meth 32.9 58 0.002 29.6 5.5 55 315-380 30-84 (204)
130 3grz_A L11 mtase, ribosomal pr 32.8 64 0.0022 29.2 5.8 64 315-394 48-114 (205)
131 2gs9_A Hypothetical protein TT 32.5 1.6E+02 0.0055 26.5 8.5 101 316-455 28-130 (211)
132 2o07_A Spermidine synthase; st 32.1 1.3E+02 0.0046 30.0 8.5 136 327-485 97-234 (304)
133 1iy9_A Spermidine synthase; ro 32.0 1.3E+02 0.0044 29.5 8.2 137 326-485 76-214 (275)
134 4dzr_A Protein-(glutamine-N5) 31.7 33 0.0011 30.9 3.5 42 316-364 20-62 (215)
135 1l3i_A Precorrin-6Y methyltran 31.3 84 0.0029 27.4 6.2 52 316-380 24-75 (192)
136 2avn_A Ubiquinone/menaquinone 31.0 2.9E+02 0.0099 26.0 10.4 31 325-364 54-84 (260)
137 1o9g_A RRNA methyltransferase; 30.9 68 0.0023 30.4 5.8 56 317-381 43-98 (250)
138 3g89_A Ribosomal RNA small sub 30.5 77 0.0026 30.6 6.2 102 324-455 79-182 (249)
139 3gdh_A Trimethylguanosine synt 30.2 2.1E+02 0.0073 26.3 9.2 53 326-395 79-133 (241)
140 2i7c_A Spermidine synthase; tr 30.1 84 0.0029 30.9 6.5 133 327-484 80-216 (283)
141 2yxe_A Protein-L-isoaspartate 30.0 85 0.0029 28.5 6.2 55 316-380 68-122 (215)
142 3lbf_A Protein-L-isoaspartate 29.6 2.5E+02 0.0086 25.2 9.3 103 317-455 69-172 (210)
143 4azs_A Methyltransferase WBDD; 29.2 63 0.0021 35.3 5.9 83 325-432 66-149 (569)
144 1g6q_1 HnRNP arginine N-methyl 27.7 1.5E+02 0.0053 29.5 8.1 112 316-455 29-143 (328)
145 3bxo_A N,N-dimethyltransferase 27.5 1.6E+02 0.0054 26.9 7.6 99 325-456 40-140 (239)
146 3q87_B N6 adenine specific DNA 27.3 1.1E+02 0.0037 27.3 6.3 27 328-364 26-52 (170)
147 3gru_A Dimethyladenosine trans 27.2 2.8E+02 0.0097 27.7 9.9 53 315-380 40-92 (295)
148 3ggd_A SAM-dependent methyltra 26.4 62 0.0021 30.2 4.6 106 327-458 58-165 (245)
149 2h1r_A Dimethyladenosine trans 26.4 1.2E+02 0.0041 30.1 6.9 54 314-380 31-84 (299)
150 2j66_A BTRK, decarboxylase; bu 25.6 2.4E+02 0.0082 29.2 9.4 66 325-394 133-223 (428)
151 1yz7_A Probable translation in 25.5 40 0.0014 32.3 3.1 43 353-395 133-175 (188)
152 2b2c_A Spermidine synthase; be 25.2 96 0.0033 31.3 6.0 135 327-485 110-247 (314)
153 3evz_A Methyltransferase; NYSG 25.1 3.1E+02 0.011 24.9 9.2 53 326-394 56-109 (230)
154 2pt6_A Spermidine synthase; tr 24.8 1.2E+02 0.0042 30.5 6.7 133 327-484 118-254 (321)
155 2ksn_A Ubiquitin domain-contai 24.7 58 0.002 29.9 3.7 37 224-261 56-92 (137)
156 1qam_A ERMC' methyltransferase 24.7 67 0.0023 30.9 4.5 41 315-364 20-60 (244)
157 3ckk_A TRNA (guanine-N(7)-)-me 24.4 89 0.003 29.9 5.3 51 322-383 43-93 (235)
158 2fhp_A Methylase, putative; al 24.3 1.5E+02 0.0052 25.9 6.6 109 326-461 45-158 (187)
159 1ws6_A Methyltransferase; stru 23.8 99 0.0034 26.6 5.1 105 327-460 43-150 (171)
160 1zkd_A DUF185; NESG, RPR58, st 23.4 1.3E+02 0.0043 31.8 6.7 111 243-364 6-119 (387)
161 3tqs_A Ribosomal RNA small sub 23.4 1.1E+02 0.0036 30.1 5.8 53 315-380 19-71 (255)
162 3adn_A Spermidine synthase; am 23.0 3.8E+02 0.013 26.5 9.9 137 327-486 85-224 (294)
163 2kl8_A OR15; structural genomi 22.8 1.3E+02 0.0043 24.4 5.0 34 355-394 42-75 (85)
164 3fut_A Dimethyladenosine trans 22.5 60 0.0021 32.3 3.8 52 315-380 37-88 (271)
165 3b5i_A S-adenosyl-L-methionine 22.5 2.3E+02 0.0078 29.6 8.4 99 325-434 52-167 (374)
166 1xwr_A Regulatory protein CII; 22.1 21 0.00073 30.7 0.4 24 38-61 51-74 (97)
167 3mb5_A SAM-dependent methyltra 22.1 1.6E+02 0.0056 27.4 6.7 54 317-380 85-138 (255)
168 1jsx_A Glucose-inhibited divis 21.8 84 0.0029 28.3 4.4 96 327-456 67-164 (207)
169 3tva_A Xylose isomerase domain 21.1 81 0.0028 30.3 4.4 52 436-487 239-290 (290)
170 2fca_A TRNA (guanine-N(7)-)-me 20.9 88 0.003 29.1 4.4 110 325-457 38-153 (213)
171 4hc4_A Protein arginine N-meth 20.6 1.3E+02 0.0044 31.5 6.0 110 315-454 73-186 (376)
172 1i9g_A Hypothetical protein RV 20.5 1.8E+02 0.0062 27.6 6.7 57 316-382 90-146 (280)
173 3lpm_A Putative methyltransfer 20.4 2.2E+02 0.0076 26.9 7.3 109 325-455 49-174 (259)
174 2pbf_A Protein-L-isoaspartate 20.1 1.7E+02 0.0058 26.8 6.2 60 316-381 69-130 (227)
175 2yvl_A TRMI protein, hypotheti 20.1 4.9E+02 0.017 23.7 9.5 51 317-380 83-133 (248)
No 1
>2zsh_B Della protein GAI; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_B*
Probab=100.00 E-value=6.7e-55 Score=379.09 Aligned_cols=105 Identities=58% Similarity=0.939 Sum_probs=58.9
Q ss_pred CCCCCCCcccccccCCCCchhhhhhhCCcccCCcHHHHHHHHHHHHHHhcccccccccccccCccccCCCccchHHHHHh
Q 043131 20 GPSGKGKMWEEEQTDGGGMDELLAVLGYNVRSSDMVEVAQKIEQLEEAMGAFQADGINHLATDTVHYDPSNLCTWLESML 99 (592)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~d~~la~~gy~v~~~~m~~vaqkle~le~~m~~~~~d~~s~lasdtvhynpsdls~w~~sml 99 (592)
.+++|+|||++++++++|||||||++|||||||||+||||||||||+|||++|+||+||||||||||||||||+||||||
T Consensus 6 ~~~~k~k~w~~~~~~~~g~DelLA~lGYkVrsSDma~vAQkLEqLE~vmg~a~~dgls~LasDTVHyNPSDLs~WvesML 85 (110)
T 2zsh_B 6 EPQDKKTMMMNEEDDGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSML 85 (110)
T ss_dssp -----------------CBCHHHHTTTCBCBGGGHHHHHHHHHHHHHHHTTC-------CHHHHTTSCTTBHHHHHHHHH
T ss_pred CCCchhhhccccccccccHHHHHHHcCccccchhHHHHHHHHHHHHHHHccccchhHHHhhhhhhcCChHHHHHHHHHHH
Confidence 46899999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccccCcCCcccccCCCCCcccccccCCCccccC
Q 043131 100 TEFNPTMPAGLGLDPVPAPSVFDDSSFVAPAESSTITSLDFSHQRVLEEPSTSDYDLKAIPGKAMYGA 167 (592)
Q Consensus 100 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ipg~a~~~~ 167 (592)
+||||+. ++++||||||||+|||++
T Consensus 86 sEln~~~-------------------------------------------~~~~ydL~aIpg~a~y~~ 110 (110)
T 2zsh_B 86 TDLNPPS-------------------------------------------SNAEYDLKAIPGDAILNQ 110 (110)
T ss_dssp HTC-----------------------------------------------------------------
T ss_pred HHcCCCC-------------------------------------------CccccchhcCCcccccCC
Confidence 9999641 134699999999999974
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.05 E-value=0.011 Score=59.03 Aligned_cols=107 Identities=13% Similarity=0.182 Sum_probs=62.9
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~ 406 (592)
-+|+|+|.|.|. +...|+.+- +.|..+||||+. +...|+...+++.++. ...+++|.. ..+.++.
T Consensus 72 ~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~----s~~ml~~A~~~~~~~~--~~~~v~~~~---~D~~~~~- 136 (261)
T 4gek_A 72 TQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDN----SPAMIERCRRHIDAYK--APTPVDVIE---GDIRDIA- 136 (261)
T ss_dssp CEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEES----CHHHHHHHHHHHHTSC--CSSCEEEEE---SCTTTCC-
T ss_pred CEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEEC----CHHHHHHHHHHHHhhc--cCceEEEee---ccccccc-
Confidence 479999999995 555566543 346689999984 4566766666654322 223455542 2333332
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecC
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQE 458 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqE 458 (592)
+. +-.+++ |.+.||++.. ..+..+|+.| |.|+|.=.++ .|.-
T Consensus 137 ----~~--~~d~v~--~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 ----IE--NASMVV--LNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ----CC--SEEEEE--EESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ----cc--ccccce--eeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 21 113444 4456788742 3456778776 6789986554 5543
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.86 E-value=0.12 Score=48.97 Aligned_cols=176 Identities=11% Similarity=0.128 Sum_probs=88.6
Q ss_pred HHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEE
Q 043131 315 QAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEY 393 (592)
Q Consensus 315 QAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF 393 (592)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+- |..++|||+. +...++...+++ +..+ ..+|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~----s~~~~~~a~~~~----~~~~-~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDM----SEKMLEIAKNRF----RGNL-KVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEES----CHHHHHHHHHHT----CSCT-TEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEEC----CHHHHHHHHHhh----ccCC-CEEE
Confidence 55666665 4556899999999995 344444432 4579999984 334454443332 2222 3344
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE-ecCCCCCCCchHHHHH
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA-EQEANHNGPVFLDRFT 471 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv-EqEanhNsp~Fl~RF~ 471 (592)
.. .++.++... +..=+|-|...||++.+ .....+|+.+ +-|+|.-.+++ +... .+.+.+...+.
T Consensus 97 ~~---~d~~~~~~~--------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~~ 162 (234)
T 3dtn_A 97 IE---ADYSKYDFE--------EKYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFINADLVH-GETAFIENLNK 162 (234)
T ss_dssp EE---SCTTTCCCC--------SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECB-CSSHHHHHHHH
T ss_pred Ee---CchhccCCC--------CCceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEEecC-CCChhhhhHHH
Confidence 32 233333221 12334444467888732 2233566665 66899766654 4332 22222222222
Q ss_pred HHHHHHHHHhhhhhccCCCCchHHHHHHHHhhcccchhhcccCCCccccccChHHHHHHHHcCCCccccC
Q 043131 472 ESLHYYSTMFDSLEGSVNSPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWRTRFSSAGFIPAHI 541 (592)
Q Consensus 472 EAL~yYsalFDSLea~~~~~s~~r~~~E~~lgreI~NiVAcEG~~RvERhE~~~qWr~Rm~~AGF~pvpL 541 (592)
. ++...+.. ..+ +.. +|.+..... ...+.-+.+.|+..|+.|||+.+.+
T Consensus 163 ~---~~~~~~~~--~~~---~~~----------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 163 T---IWRQYVEN--SGL---TEE----------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp H---HHHHHHHT--SSC---CHH----------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred H---HHHHHHHh--cCC---CHH----------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 2 12111111 111 111 111111111 2345567889999999999998864
No 4
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.11 E-value=1.4 Score=42.36 Aligned_cols=129 Identities=20% Similarity=0.167 Sum_probs=67.1
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCC--CChHHHHHHHHHHHHHHHHcCc--e
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAA--DNTDQLQQVGWKLAQLAESIHV--E 390 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~--~~~~~L~etG~rL~~fA~~lgV--p 390 (592)
..|++.+.-...-+|+|+|.|.|.- ...|+.+- .|..++|||+.... +....++...+++ +..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~----~~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHL----LAGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHH----HTSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHH----HhcCCCCc
Confidence 3566666555556899999999863 33344331 24469999985421 0001344444443 23343 2
Q ss_pred eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCC--cEEEEEecCCCCCCC
Q 043131 391 FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKP--DIFTVAEQEANHNGP 464 (592)
Q Consensus 391 FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~P--kVvtlvEqEanhNsp 464 (592)
.+|.. .+ ++....+.+..+.-++++.+ ..||++.+ .+.+++.++.+.| ..+++.+.....+.+
T Consensus 103 v~~~~--~d---~~~~~~~~~~~~~fD~v~~~--~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 103 LTVHF--NT---NLSDDLGPIADQHFDRVVLA--HSLWYFAS----ANALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp EEEEC--SC---CTTTCCGGGTTCCCSEEEEE--SCGGGSSC----HHHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred eEEEE--CC---hhhhccCCCCCCCEEEEEEc--cchhhCCC----HHHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 44443 11 11111122221112455544 45677643 2458888988887 566667766554433
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.99 E-value=0.33 Score=44.67 Aligned_cols=111 Identities=13% Similarity=0.120 Sum_probs=64.5
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--e
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--F 391 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--F 391 (592)
.+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+. +...++...+++ +..++. +
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~----s~~~~~~a~~~~----~~~~~~~~~ 95 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDF----SKHMNEIALKNI----ADANLNDRI 95 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEES----CHHHHHHHHHHH----HHTTCTTTE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEEC----CHHHHHHHHHHH----HhccccCce
Confidence 3566777765556 99999999996 55555555 3479999984 345555544443 344542 4
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+|.. .+++++. +. ++..=+|-|...||++. ....+|+.+ +-|+|.-.+++
T Consensus 96 ~~~~---~d~~~~~-----~~--~~~~D~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 96 QIVQ---GDVHNIP-----IE--DNYADLIVSRGSVFFWE----DVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp EEEE---CBTTBCS-----SC--TTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEE---cCHHHCC-----CC--cccccEEEECchHhhcc----CHHHHHHHHHHhCCCCCEEEE
Confidence 5543 1233322 21 22333444555678772 244566554 67899876665
No 6
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.63 E-value=0.63 Score=47.87 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=61.6
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEEe
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEYR 394 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF~ 394 (592)
+++.+.....-+|+|+|.|.|. +...|+.+- |.+++|+++.| ..++...++ ++..|+ ..+|.
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~----~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-----QQLEMMRKQ----TAGLSGSERIHGH 234 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-----HHHHHHHHH----HTTCTTGGGEEEE
T ss_pred HHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-----HHHHHHHHH----HHhcCcccceEEE
Confidence 4444433455689999999996 444454431 45799999943 334443333 334454 35554
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEE-EEecCCC
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFT-VAEQEAN 460 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvt-lvEqEan 460 (592)
.- ++.+.. +.+ ++.-++++.+. .||++.+ .....+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 235 ~~---d~~~~~---~~~-p~~~D~v~~~~--vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 235 GA---NLLDRD---VPF-PTGFDAVWMSQ--FLDCFSE--EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EC---CCCSSS---CCC-CCCCSEEEEES--CSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred Ec---cccccC---CCC-CCCcCEEEEec--hhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 32 222211 001 11124555444 5676643 2345677766 668997654 4564443
No 7
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=93.49 E-value=2 Score=39.75 Aligned_cols=113 Identities=16% Similarity=0.194 Sum_probs=64.4
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEY 393 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF 393 (592)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+. +...++...+++ +..+++ ++|
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~ 92 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDV----QEEMVNYAWEKV----NKLGLKNVEV 92 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEES----CHHHHHHHHHHH----HHHTCTTEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEEC----CHHHHHHHHHHH----HHcCCCcEEE
Confidence 567777765566689999999997444444443 35569999984 345565554444 334443 444
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
... +++++. +. ++..=+|-+...+|++.+ ...+|+.+ +.|+|.-.+++
T Consensus 93 ~~~---d~~~~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 93 LKS---EENKIP-----LP--DNTVDFIFMAFTFHELSE----PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEC---BTTBCS-----SC--SSCEEEEEEESCGGGCSS----HHHHHHHHHHHEEEEEEEEE
T ss_pred Eec---ccccCC-----CC--CCCeeEEEeehhhhhcCC----HHHHHHHHHHHhCCCeEEEE
Confidence 431 222221 11 222334445566777732 35556554 67899765554
No 8
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.43 E-value=0.33 Score=48.02 Aligned_cols=118 Identities=9% Similarity=0.098 Sum_probs=63.7
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCccc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLAD 403 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sled 403 (592)
....+|+|+|.|.|.--..++..|+.+..+ -.+.+|||++ +...++...+++.+...--++.|+|... ..++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~----S~~ml~~a~~~~~~~~~~~~v~~~~~~~---~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEP----SAEQIAKYKELVAKTSNLENVKFAWHKE---TSSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECS----CHHHHHHHHHHHHTCSSCTTEEEEEECS---CHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeC----CHHHHHHHHHHHHhccCCCcceEEEEec---chhh
Confidence 456799999999995444567777654211 1234599995 3455655554432110011456666542 2222
Q ss_pred CCcc-cccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 404 LDAS-MLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 404 l~~~-~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+... ..... ++..=+|-|.+.||++.+ .+.+|+.+ |-|+|.=.+++
T Consensus 123 ~~~~~~~~~~--~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 123 YQSRMLEKKE--LQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHTTTC--CCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhccccC--CCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEE
Confidence 2100 00011 223446667778899853 45667766 45699855543
No 9
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.07 E-value=1.1 Score=45.22 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=64.7
Q ss_pred HHHhhhCCCC-eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 316 AILEAFDGKR-RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 316 AILEA~~g~~-~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+- |.+++|+++.| ..++...+++ +..++. ++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 232 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLP-----TTRDAARKTI----HAHDLGGRVE 232 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHH----HHTTCGGGEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECH-----HHHHHHHHHH----HhcCCCCceE
Confidence 6777776555 7899999999996 444554432 44899999864 2344333333 334442 55
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecCC
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQEA 459 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqEa 459 (592)
|... ++.+... + + + +.+=+|-+...||++.+ .....+|+.+ +.|+|.-.++ +|.-.
T Consensus 233 ~~~~---d~~~~~~--~-~-~--~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 233 FFEK---NLLDARN--F-E-G--GAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp EEEC---CTTCGGG--G-T-T--CCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred EEeC---CcccCcc--c-C-C--CCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5432 2222110 0 1 1 12334445556787732 2346677766 6689975544 55433
No 10
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=92.97 E-value=0.47 Score=48.86 Aligned_cols=160 Identities=22% Similarity=0.354 Sum_probs=86.7
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEE
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEY 393 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF 393 (592)
.+.|++++.-...-+|+|+|-+.|. ++.+|+.+- |.+|+|.++.| ..++...+++. .+..-+ .+|
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp-----~v~~~a~~~~~-~~~~~r--v~~ 232 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP-----EVVWTAKQHFS-FQEEEQ--IDF 232 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH-----HHHHHHHHHSC-C--CCS--EEE
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH-----HHHHHHHHhhh-hcccCc--eee
Confidence 4678888765555689999999996 555665542 66899988854 23433332221 111112 344
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEecCCCC--CCCchHHH
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQEANH--NGPVFLDR 469 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEqEanh--Nsp~Fl~R 469 (592)
.+ .+-+++ .+ + +.+++... .-||...+ .....+|+.+ +.|+|.= ++++|.-.+. +.|.+
T Consensus 233 ~~--gD~~~~------~~-~-~~D~~~~~--~vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~--- 295 (353)
T 4a6d_A 233 QE--GDFFKD------PL-P-EADLYILA--RVLHDWAD--GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL--- 295 (353)
T ss_dssp EE--SCTTTS------CC-C-CCSEEEEE--SSGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH---
T ss_pred ec--CccccC------CC-C-CceEEEee--eecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH---
Confidence 43 111111 01 1 23444444 45787643 2234567666 6799975 5556654332 22211
Q ss_pred HHHHHHHHHHHhhhhhccCCCCchHHHHHHHHhhcccchhhcccCCCccccccChHHHHHHHHcCCCccccC
Q 043131 470 FTESLHYYSTMFDSLEGSVNSPENHKAMTEAYMGNQICNVVACEGADRVERHETLAQWRTRFSSAGFIPAHI 541 (592)
Q Consensus 470 F~EAL~yYsalFDSLea~~~~~s~~r~~~E~~lgreI~NiVAcEG~~RvERhE~~~qWr~Rm~~AGF~pvpL 541 (592)
.++||- .+ .+.+.|.+| +.++|+..++.|||+.+.+
T Consensus 296 --------~~~~dl---------------~m--------l~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 --------TQLYSL---------------NM--------LVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp --------HHHHHH---------------HH--------HHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred --------HHHHHH---------------HH--------HHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 111110 00 123446555 5689999999999998764
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=92.14 E-value=3.6 Score=39.38 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=62.1
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEe
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYR 394 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~ 394 (592)
.|++.+.....-+|+|+|.|.|. +...|+.+- + ++|||+. +...++...+++ +..|++ ++|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~----s~~~l~~a~~~~----~~~~~~~v~~~ 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDL----TEDILKVARAFI----EGNGHQQVEYV 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEES----CHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeC----CHHHHHHHHHHH----HhcCCCceEEE
Confidence 35555655556689999999886 555666652 2 8999984 345555444433 344543 4554
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHH-HHhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSV-VKNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtlv 455 (592)
. .+++++. +. ++..=+|-|.+.||++.+ ...+|+. .|-|+|.-.+++
T Consensus 91 ~---~d~~~l~-----~~--~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 Q---GDAEQMP-----FT--DERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp E---CCC-CCC-----SC--TTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred E---ecHHhCC-----CC--CCCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 3 2233322 21 223334445567888743 3455554 477899865554
No 12
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.12 E-value=1.8 Score=43.40 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=60.4
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
+.|++.+.-.. .+|+|+|.+.|. +...|+.+- |.+++|+++.|. . ++...+++.+.. +.-.++|.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~--~---~~~a~~~~~~~~--~~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG--S---LGVARDNLSSLL--AGERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT--C---THHHHHHTHHHH--HTTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH--H---HHHHHHHHhhcC--CCCcEEEe
Confidence 56777764344 899999999995 444444432 446999999732 2 333333433221 11124454
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEE-EEecC
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFT-VAEQE 458 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvt-lvEqE 458 (592)
.- ++.+ + + +..-++++.+ ..||+..+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 223 ~~---d~~~--~--~---~~~~D~v~~~--~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 223 GG---DMLQ--E--V---PSNGDIYLLS--RIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ES---CTTT--C--C---CSSCSEEEEE--SCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cC---CCCC--C--C---CCCCCEEEEc--hhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 31 2221 1 1 1112455544 45676632 2334677766 667997544 45544
No 13
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=91.71 E-value=2.1 Score=42.67 Aligned_cols=117 Identities=17% Similarity=0.141 Sum_probs=65.9
Q ss_pred HHHHhhhCC--CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--
Q 043131 315 QAILEAFDG--KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-- 390 (592)
Q Consensus 315 QAILEA~~g--~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-- 390 (592)
+.|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++...+++. ..|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~ 216 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-----SVLEVAKENAR----IQGVASR 216 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHHH----HHTCGGG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCcc
Confidence 467777765 667899999999995 444454442 44799999842 44555444443 33442
Q ss_pred eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEecCCC
Q 043131 391 FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQEAN 460 (592)
Q Consensus 391 FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEqEan 460 (592)
++|... ++.+. .+. + ..=+|-|...||++.+ .....+|+.+ +.|+|.- ++++|....
T Consensus 217 v~~~~~---d~~~~-----~~~--~-~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 217 YHTIAG---SAFEV-----DYG--N-DYDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEES---CTTTS-----CCC--S-CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred eEEEec---ccccC-----CCC--C-CCcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 555532 22221 111 1 1333444456777632 2345666665 6679976 555665443
No 14
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=90.91 E-value=2.3 Score=42.77 Aligned_cols=114 Identities=17% Similarity=0.094 Sum_probs=62.1
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEE
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEY 393 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF 393 (592)
.|++.+.-.+..+|+|+|.+.|. +...|+.+- |.+++|+++. ...++...+++. ..++ ..+|
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-----~~~~~~a~~~~~----~~~~~~~v~~ 223 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGG----LLSALLTAH---EDLSGTVLDL-----QGPASAAHRRFL----DTGLSGRAQV 223 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-----HHHHHHHHHHHH----HTTCTTTEEE
T ss_pred HHHHhCCCCCCCEEEEeCCChhH----HHHHHHHHC---CCCeEEEecC-----HHHHHHHHHhhh----hcCcCcCeEE
Confidence 45666654556799999999993 444555432 4579999974 234555444443 3343 2555
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecCC
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQEA 459 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqEa 459 (592)
... ++.+ + + |..-+++.. ...||++.+ .....+|+.+ +.|+|.-.++ +|.-.
T Consensus 224 ~~~---d~~~--~--~---p~~~D~v~~--~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 224 VVG---SFFD--P--L---PAGAGGYVL--SAVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEC---CTTS--C--C---CCSCSEEEE--ESCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred ecC---CCCC--C--C---CCCCcEEEE--ehhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 542 2211 1 1 101134443 345787643 1245677766 6679975444 45433
No 15
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=90.76 E-value=1.6 Score=44.85 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=64.7
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--ee
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EF 391 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pF 391 (592)
...|++.+.-.+..+|+|+|.+.|. +...|+.+ -|.+++|+++.| ..++...+++. ..|+ ..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~---~p~~~~~~~D~~-----~~~~~a~~~~~----~~~l~~~v 254 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA---FPGLRGTLLERP-----PVAEEARELLT----GRGLADRC 254 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH---CTTCEEEEEECH-----HHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH---CCCCeEEEEcCH-----HHHHHHHHhhh----hcCcCCce
Confidence 3567888776677899999999996 44445444 255799999842 34544444433 3343 24
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEE-EEecCCC
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFT-VAEQEAN 460 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvt-lvEqEan 460 (592)
+|... ++.+ + + +..-++++.+. .||+..+ .....+|+.+ +.|+|.=.+ ++|.-..
T Consensus 255 ~~~~~---d~~~--~--~---p~~~D~v~~~~--vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 255 EILPG---DFFE--T--I---PDGADVYLIKH--VLHDWDD--DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEEEC---CTTT--C--C---CSSCSEEEEES--CGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred EEecc---CCCC--C--C---CCCceEEEhhh--hhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 55532 1211 1 1 10114544443 4577632 1234677766 567886544 4555443
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.75 E-value=2.2 Score=43.45 Aligned_cols=116 Identities=15% Similarity=0.037 Sum_probs=65.2
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--e
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--F 391 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--F 391 (592)
.+.|++.+.-.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.| ..++...+++. ..|++ .
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v 242 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNLP-----GAIDLVNENAA----EKGVADRM 242 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCCCE
Confidence 3567777765667799999999997 344444431 45799999852 23544444433 33442 5
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEE-EEecCC
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFT-VAEQEA 459 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvt-lvEqEa 459 (592)
+|..- ++.+. .+. +.++++.+ ..||++.+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 243 ~~~~~---d~~~~-----~~~--~~D~v~~~--~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 243 RGIAV---DIYKE-----SYP--EADAVLFC--RILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEEC---CTTTS-----CCC--CCSEEEEE--SCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEEeC---ccccC-----CCC--CCCEEEEe--chhccCCH--HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 55431 22221 122 22455544 45677632 2356677766 567887544 566443
No 17
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=90.44 E-value=2.1 Score=43.53 Aligned_cols=113 Identities=19% Similarity=0.223 Sum_probs=62.7
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
..|++.+.-.+..+|+|+|.|.|. +...|+.+- |.+++|+++. ...++...+++ +..|+. .+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-----~~~~~~a~~~~----~~~~~~~~v~ 235 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGG----MLAAIALRA---PHLRGTLVEL-----AGPAERARRRF----ADAGLADRVT 235 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-----HHHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCH----HHHHHHHHC---CCCEEEEEeC-----HHHHHHHHHHH----HhcCCCCceE
Confidence 457777765566799999999994 445555442 4579999984 23454444443 334442 55
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEec
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQ 457 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEq 457 (592)
|... ++.+ .+ +. ..=+|-|...||++.+ .....+|+.+ +.|+|.- ++++|.
T Consensus 236 ~~~~---d~~~----~~---~~--~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 236 VAEG---DFFK----PL---PV--TADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEC---CTTS----CC---SC--CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeC---CCCC----cC---CC--CCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5432 2211 01 11 1223334455777632 1223566665 6679986 445666
No 18
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=89.77 E-value=3.8 Score=42.37 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=61.0
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-C----ceeEEeeeecC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-H----VEFEYRGFVAN 399 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-g----VpFeF~~v~~~ 399 (592)
..-+|+|+|.|.|.-=..|.+.+ .|..++|||+. +...++...+++.+.+... | -..+|..-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~--- 149 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDM----LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG--- 149 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEEC----CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES---
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEEC----CHHHHHHHHHHHHHhhhhcccccCCCceEEEEc---
Confidence 34579999999996333333332 13359999994 4567777777777666554 4 34555532
Q ss_pred CcccCCcc-cccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 400 SLADLDAS-MLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 400 sledl~~~-~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.++++... ...+..+.=+.|+.| ..||++.+ ...+|+.+ +-|+|.-.+++
T Consensus 150 d~~~l~~~~~~~~~~~~fD~V~~~--~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 150 FIENLATAEPEGVPDSSVDIVISN--CVCNLSTN----KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CTTCGGGCBSCCCCTTCEEEEEEE--SCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHhhhcccCCCCCCCEEEEEEc--cchhcCCC----HHHHHHHHHHHcCCCCEEEE
Confidence 33332110 001211111344444 45676632 45566655 67899865554
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=89.36 E-value=1.9 Score=41.55 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=56.9
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEeeeecCCcc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRGFVANSLA 402 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~v~~~sle 402 (592)
...-+|+|+|.|.|. +...|+.+. |..++|||+. +...++...++ ++..+++ .+|.. .++.
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~----s~~~~~~a~~~----~~~~~~~~~~~~~---~d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDI----SPESLEKAREN----TEKNGIKNVKFLQ---ANIF 97 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEES----CHHHHHHHHHH----HHHTTCCSEEEEE---CCGG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEEC----CHHHHHHHHHH----HHHcCCCCcEEEE---cccc
Confidence 345689999999985 444555441 3469999984 34445444333 3344553 44442 1222
Q ss_pred cCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 403 DLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 403 dl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
++. .. ++..=+|-+...||++.+ .+.+|+.+ +-|+|.-++++
T Consensus 98 ~~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 98 SLP-----FE--DSSFDHIFVCFVLEHLQS----PEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp GCC-----SC--TTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred cCC-----CC--CCCeeEEEEechhhhcCC----HHHHHHHHHHHcCCCcEEEE
Confidence 221 11 223444555566787743 34666655 66899865554
No 20
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=89.24 E-value=0.75 Score=47.52 Aligned_cols=110 Identities=14% Similarity=0.180 Sum_probs=59.2
Q ss_pred HHHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeE
Q 043131 314 NQAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFE 392 (592)
Q Consensus 314 NQAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFe 392 (592)
...|++.+. -...-+|+|+|.|.|.- ...|+.+- |.+++|+++.| ..++ .|+.. -..+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~-----~~~~--------~a~~~-~~v~ 247 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDLP-----HVIS--------EAPQF-PGVT 247 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECH-----HHHT--------TCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecCH-----HHHH--------hhhhc-CCeE
Confidence 356777776 34567999999999963 44444332 55789999853 1221 12221 1234
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEE-EEecCC
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFT-VAEQEA 459 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvt-lvEqEa 459 (592)
|.. .++.+ + + | ++++++.. ..||++.+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 248 ~~~---~D~~~--~--~---p-~~D~v~~~--~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 248 HVG---GDMFK--E--V---P-SGDTILMK--WILHDWSD--QHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EEE---CCTTT--C--C---C-CCSEEEEE--SCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred EEe---CCcCC--C--C---C-CCCEEEeh--HHhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 433 12221 1 1 1 22455443 45787643 2345677776 568997544 455433
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=88.91 E-value=1.1 Score=41.58 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=57.5
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
..+++.+.....-.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++. -++ +|.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~~-----~~~--~~~ 94 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-G----RTVYGIEP----SREMRMIAKEKLP-----KEF--SIT 94 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-T----CEEEEECS----CHHHHHHHHHHSC-----TTC--CEE
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-C----CeEEEEeC----CHHHHHHHHHhCC-----Cce--EEE
Confidence 345555554456689999999995 55666665 2 48999984 3344433333221 123 333
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. .++.++... . .-+.++.+ ..||++.+. ....+|+.+ +.|+|.-.+++
T Consensus 95 ~---~d~~~~~~~----~--~fD~v~~~--~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 95 E---GDFLSFEVP----T--SIDTIVST--YAFHHLTDD--EKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp S---CCSSSCCCC----S--CCSEEEEE--SCGGGSCHH--HHHHHHHHHHHHSCTTCEEEE
T ss_pred e---CChhhcCCC----C--CeEEEEEC--cchhcCChH--HHHHHHHHHHHhcCCCCEEEE
Confidence 2 233333211 1 12455544 457777431 122355554 67899755554
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=88.79 E-value=3 Score=39.56 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=66.6
Q ss_pred HHhhCChhHHHHHHHHHHHHhhhCC-CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHH
Q 043131 299 FYETCPYLKFAHFTANQAILEAFDG-KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVG 377 (592)
Q Consensus 299 fye~~P~lkFAhftANQAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG 377 (592)
+|+..+-..-.+...-..+++.+.+ ...-+|+|+|.|.|. +...|+.+-+ . ++|||+. +...++...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~~---~-~v~~vD~----s~~~~~~a~ 86 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYVK---G-QITGIDL----FPDFIEIFN 86 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHCC---S-EEEEEES----CHHHHHHHH
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhCC---C-eEEEEEC----CHHHHHHHH
Confidence 3443333333333334445565533 334589999999986 3344444422 2 8999984 344454443
Q ss_pred HHHHHHHHHcCce--eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE
Q 043131 378 WKLAQLAESIHVE--FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV 454 (592)
Q Consensus 378 ~rL~~fA~~lgVp--FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl 454 (592)
+ .++..|++ .+|.. .+++++. .. ++..=+|-|...+|++ + .+.+|+.+ +-|+|.-.++
T Consensus 87 ~----~~~~~~~~~~~~~~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~-~----~~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 87 E----NAVKANCADRVKGIT---GSMDNLP-----FQ--NEELDLIWSEGAIYNI-G----FERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp H----HHHHTTCTTTEEEEE---CCTTSCS-----SC--TTCEEEEEEESCSCCC-C----HHHHHHHHHTTEEEEEEEE
T ss_pred H----HHHHcCCCCceEEEE---CChhhCC-----CC--CCCEEEEEecChHhhc-C----HHHHHHHHHHHcCCCcEEE
Confidence 3 34555655 55543 2333332 11 2233344444567776 2 45666665 5689976665
Q ss_pred E
Q 043131 455 A 455 (592)
Q Consensus 455 v 455 (592)
+
T Consensus 148 ~ 148 (257)
T 3f4k_A 148 V 148 (257)
T ss_dssp E
T ss_pred E
Confidence 4
No 23
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.69 E-value=0.8 Score=47.33 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=59.5
Q ss_pred HHHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeE
Q 043131 314 NQAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFE 392 (592)
Q Consensus 314 NQAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFe 392 (592)
...|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.| ..++ .|+.. -..+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~--------~a~~~-~~v~ 249 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLP-----HVIQ--------DAPAF-SGVE 249 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHHT--------TCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehH-----HHHH--------hhhhc-CCCE
Confidence 356777775 3456799999999997 444444432 56799999853 1221 12221 1234
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEecCC
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQEA 459 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEqEa 459 (592)
|.. .++.+ + + | ++++++.+. .||++.+ .....+|+.+ +.|+|.- ++++|.-.
T Consensus 250 ~~~---~d~~~--~--~---p-~~D~v~~~~--vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 250 HLG---GDMFD--G--V---P-KGDAIFIKW--ICHDWSD--EHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EEE---CCTTT--C--C---C-CCSEEEEES--CGGGBCH--HHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred EEe---cCCCC--C--C---C-CCCEEEEec--hhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 432 12211 1 1 2 225554444 4787643 2345677766 6689975 44456543
No 24
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=88.65 E-value=1.3 Score=51.90 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=70.1
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHH--HHcCce-eEE
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLA--ESIHVE-FEY 393 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA--~~lgVp-FeF 393 (592)
|++.+.....-.|+|+|.|.|. +...|+.+ ++|.-+||||+. +...++...++|.... +..|++ .+|
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDI----S~emLe~AReRLa~~lnAkr~gl~nVef 782 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDI----SPKGLARAAKMLHVKLNKEACNVKSATL 782 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEES----CHHHHHHHHHHHHHHTTTTCSSCSEEEE
T ss_pred HHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEEC----CHHHHHHHHHHhhhccchhhcCCCceEE
Confidence 3444433344579999999995 66667655 456679999994 4567777777776542 223442 444
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHH-HHhcCCcEEEEEecCC
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSV-VKNIKPDIFTVAEQEA 459 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtlvEqEa 459 (592)
.. .++.++.. ..+.-++++. ...||++.+ .....+|+. .+-|+|.++++...+.
T Consensus 783 iq---GDa~dLp~-----~d~sFDlVV~--~eVLeHL~d--p~l~~~L~eI~RvLKPG~LIISTPN~ 837 (950)
T 3htx_A 783 YD---GSILEFDS-----RLHDVDIGTC--LEVIEHMEE--DQACEFGEKVLSLFHPKLLIVSTPNY 837 (950)
T ss_dssp EE---SCTTSCCT-----TSCSCCEEEE--ESCGGGSCH--HHHHHHHHHHHHTTCCSEEEEEECBG
T ss_pred EE---CchHhCCc-----ccCCeeEEEE--eCchhhCCh--HHHHHHHHHHHHHcCCCEEEEEecCc
Confidence 32 23444332 1111134444 456788753 234456655 5888999766665544
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=88.61 E-value=5.1 Score=39.78 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=62.0
Q ss_pred HHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--e
Q 043131 315 QAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--F 391 (592)
Q Consensus 315 QAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--F 391 (592)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|+. .
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v 169 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTL----SAAQADFGNRR----ARELRIDDHV 169 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeC----CHHHHHHHHHH----HHHcCCCCce
Confidence 45777776 3445689999999885 4444554432 58999984 34455444333 4455654 5
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+|.. .+++++. +. ++..=+|-|...+|++ + ...+|+.+ +-|+|.-.+++
T Consensus 170 ~~~~---~d~~~~~-----~~--~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 170 RSRV---CNMLDTP-----FD--KGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEE---CCTTSCC-----CC--TTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEE---CChhcCC-----CC--CCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 5543 2333332 11 1233334445567776 3 55666655 67899765553
No 26
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=88.61 E-value=2.5 Score=38.74 Aligned_cols=97 Identities=14% Similarity=0.202 Sum_probs=53.7
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-.|+|+|.|.|. +...|+.+ | .++|||+. +...++...++ .-..+|.. .++.++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~~a~~~--------~~~~~~~~---~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEP----ATRLVELARQT--------HPSVTFHH---GTITDLS 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECC----CHHHHHHHHHH--------CTTSEEEC---CCGGGGG
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeC----CHHHHHHHHHh--------CCCCeEEe---Ccccccc
Confidence 4579999999996 55666665 2 38999984 33444333322 11233332 2233321
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.. ++..=+|-|...||++.. .....+|+.+ +.|+|.-.+++
T Consensus 98 -----~~--~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 -----DS--PKRWAGLLAWYSLIHMGP--GELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp -----GS--CCCEEEEEEESSSTTCCT--TTHHHHHHHHHHTEEEEEEEEE
T ss_pred -----cC--CCCeEEEEehhhHhcCCH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 21 223334445566788742 3456666655 66899766554
No 27
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=88.03 E-value=1.4 Score=44.76 Aligned_cols=44 Identities=14% Similarity=0.057 Sum_probs=31.7
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCC
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPP 365 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p 365 (592)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 217 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRA 217 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECH
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCH
Confidence 467888766677899999999996 444444332 46899999853
No 28
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=87.71 E-value=19 Score=34.00 Aligned_cols=113 Identities=12% Similarity=0.169 Sum_probs=63.4
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEY 393 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF 393 (592)
.-+++.+.-...-+|+|+|.|.|. +...|+.+- + ++|||+. +...++...+++ +..|++ ++|
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~----s~~~~~~a~~~~----~~~~~~~v~~ 73 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDA----TKEMVEVASSFA----QEKGVENVRF 73 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEES----CHHHHHHHHHHH----HHHTCCSEEE
T ss_pred chHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEEC----CHHHHHHHHHHH----HHcCCCCeEE
Confidence 345666666667789999999986 445566542 2 8999984 344554444433 333443 444
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE-ecC
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA-EQE 458 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv-EqE 458 (592)
.. ..++++. .. ++..=+|-|...+|++.+ ...+|+.+ +-|+|.-.+++ +..
T Consensus 74 ~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 74 QQ---GTAESLP-----FP--DDSFDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EE---CBTTBCC-----SC--TTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Ee---cccccCC-----CC--CCcEEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 43 2233322 22 223334445566787743 34555554 67899865554 443
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=87.39 E-value=1.3 Score=41.14 Aligned_cols=106 Identities=18% Similarity=0.280 Sum_probs=56.3
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc------eeEEeeeecC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV------EFEYRGFVAN 399 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV------pFeF~~v~~~ 399 (592)
.-.|+|+|.|.|. +...|+.+ + .++|||+. +...++... +.++..++ .++|.. .
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~----~~~~~~~~~~~~~~~~~~~~---~ 90 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-G----YSVTGIDI----NSEAIRLAE----TAARSPGLNQKTGGKAEFKV---E 90 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHH----HHTTCCSCCSSSSCEEEEEE---C
T ss_pred CCeEEEECCCCCH----HHHHHHhC-C----CeEEEEEC----CHHHHHHHH----HHHHhcCCccccCcceEEEE---e
Confidence 3479999999985 44555555 2 48999984 233443332 23344455 344443 2
Q ss_pred CcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecCC
Q 043131 400 SLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQEA 459 (592)
Q Consensus 400 sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqEa 459 (592)
.+.++. .. ++..=+|-|...||++.+ +..+..+|+.+ +-|+|.-.++ ++...
T Consensus 91 d~~~~~-----~~--~~~~D~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 91 NASSLS-----FH--DSSFDFAVMQAFLTSVPD-PKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CTTSCC-----SC--TTCEEEEEEESCGGGCCC-HHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccC-----CC--CCceeEEEEcchhhcCCC-HHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 222221 11 123334444456787743 22344677665 6689976555 44433
No 30
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.35 E-value=8.9 Score=36.23 Aligned_cols=110 Identities=16% Similarity=0.131 Sum_probs=60.3
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
..|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+. +...++...++ ++..|+. .+
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~----s~~~l~~a~~~----~~~~~~~~~v~ 89 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDM----SSLFTAQAKRR----AEELGVSERVH 89 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeC----CHHHHHHHHHH----HHhcCCCcceE
Confidence 3455555544555899999999973 334444332 37899984 34455444333 4445653 56
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
|.. .+++++.. ++..=+|-|...+|++.+ ...+|+.+ |-|+|.-.+++
T Consensus 90 ~~~---~d~~~~~~--------~~~fD~V~~~~~~~~~~~----~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 90 FIH---NDAAGYVA--------NEKCDVAACVGATWIAGG----FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEE---SCCTTCCC--------SSCEEEEEEESCGGGTSS----SHHHHHHHTTSEEEEEEEEE
T ss_pred EEE---CChHhCCc--------CCCCCEEEECCChHhcCC----HHHHHHHHHHHcCCCeEEEE
Confidence 653 23333321 112333344556777642 35566655 66799865554
No 31
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=86.78 E-value=2.9 Score=39.66 Aligned_cols=122 Identities=15% Similarity=0.143 Sum_probs=64.7
Q ss_pred hhHHHHHHHHHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHH
Q 043131 305 YLKFAHFTANQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLA 384 (592)
Q Consensus 305 ~lkFAhftANQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA 384 (592)
++.-.....-+.|++.+.-...-+|+|+|.|.|. +...|+.+-+ .++|||+. +...++...+++...
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~----s~~~~~~a~~~~~~~- 101 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDI----CSNIVNMANERVSGN- 101 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHTCCSC-
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeC----CHHHHHHHHHHhhcC-
Confidence 3334444455777888766667799999999886 3344443322 48999984 333443332222111
Q ss_pred HHcCceeEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 385 ESIHVEFEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 385 ~~lgVpFeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
-..+|.. .++.++. .. ++..=+|-|...||++.. .....+|+.+ +-|+|.-.+++
T Consensus 102 ----~~~~~~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 ----NKIIFEA---NDILTKE-----FP--ENNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp ----TTEEEEE---CCTTTCC-----CC--TTCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CCeEEEE---CccccCC-----CC--CCcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEEEE
Confidence 2234432 1222221 11 223444445566788721 2345666655 66899755543
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=84.78 E-value=17 Score=35.19 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=60.2
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEe
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYR 394 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~ 394 (592)
+++.+... .-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..|++ .+|.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~~~ 122 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDL----SAQMIDRAKQAA----EAKGVSDNMQFI 122 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH----HC-CCGGGEEEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEEC----CHHHHHHHHHHH----HhcCCCcceEEE
Confidence 45555433 5689999999995 55666665 2 48999984 344554444433 344543 4444
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. .+++++.. .. ++..=+|-|...||++.+ . ..+|+.+ +-|+|.-++++
T Consensus 123 ~---~d~~~~~~----~~--~~~fD~v~~~~~l~~~~~---~-~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 123 H---CAAQDVAS----HL--ETPVDLILFHAVLEWVAD---P-RSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp E---SCGGGTGG----GC--SSCEEEEEEESCGGGCSC---H-HHHHHHHHHTEEEEEEEEE
T ss_pred E---cCHHHhhh----hc--CCCceEEEECchhhcccC---H-HHHHHHHHHHcCCCeEEEE
Confidence 3 23333321 11 123334444566787732 2 4556554 67899876665
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=84.67 E-value=5.3 Score=37.03 Aligned_cols=117 Identities=16% Similarity=0.201 Sum_probs=64.0
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc------
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV------ 389 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV------ 389 (592)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+. +...++...+++. ..++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~----s~~~~~~a~~~~~----~~~~~~~~~~ 84 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDV----SYSVLERAKDRLK----IDRLPEMQRK 84 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEES----CHHHHHHHHHHHT----GGGSCHHHHT
T ss_pred HHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEEC----CHHHHHHHHHHHH----hhccccccCc
Confidence 34444443444589999999996 556666542 3479999994 3455555444432 2222
Q ss_pred eeEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecCC
Q 043131 390 EFEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEA 459 (592)
Q Consensus 390 pFeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEa 459 (592)
.++|.. .+++.+.. ..+.-++++ |...||++.+ ..+..+|+.+ +.|+|.-++++....
T Consensus 85 ~v~~~~---~d~~~~~~-----~~~~fD~V~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 85 RISLFQ---SSLVYRDK-----RFSGYDAAT--VIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp TEEEEE---CCSSSCCG-----GGTTCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ceEEEe---Cccccccc-----ccCCCCEEE--EHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccch
Confidence 234432 12222221 111113444 4456788732 2345677665 678999877765543
No 34
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=82.43 E-value=22 Score=33.89 Aligned_cols=111 Identities=19% Similarity=0.236 Sum_probs=61.3
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|++ .+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~~~ 114 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISI----SRPQVNQANAR----ATAAGLANRVT 114 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeC----CHHHHHHHHHH----HHhcCCCcceE
Confidence 456666654556699999999886 3444444333 58999984 34445444333 3444543 45
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
|.. .+++++. .. ++..=+|-+...||++.+ ...+|+.+ +-|+|.-.+++
T Consensus 115 ~~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 115 FSY---ADAMDLP-----FE--DASFDAVWALESLHHMPD----RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EEE---CCTTSCC-----SC--TTCEEEEEEESCTTTSSC----HHHHHHHHHTTEEEEEEEEE
T ss_pred EEE---CccccCC-----CC--CCCccEEEEechhhhCCC----HHHHHHHHHHHcCCCeEEEE
Confidence 543 2233321 11 223334445556777733 35666665 56799855543
No 35
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=82.42 E-value=29 Score=34.18 Aligned_cols=107 Identities=16% Similarity=0.188 Sum_probs=59.2
Q ss_pred eEEEecccCC---CCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCccc
Q 043131 327 VHVIDFSMNQ---GMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLAD 403 (592)
Q Consensus 327 VHIIDfgI~~---G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sled 403 (592)
-+|+|+|.|. |. +..+++.. . |..|+|+|+. +...|+...+++. .. -..+|.. .++.+
T Consensus 79 ~~vLDlGcG~pt~G~-~~~~~~~~--~----p~~~v~~vD~----sp~~l~~Ar~~~~---~~--~~v~~~~---~D~~~ 139 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-THEVAQSV--N----PDARVVYVDI----DPMVLTHGRALLA---KD--PNTAVFT---ADVRD 139 (274)
T ss_dssp CEEEEETCCSCCSSC-HHHHHHHH--C----TTCEEEEEES----SHHHHHHHHHHHT---TC--TTEEEEE---CCTTC
T ss_pred CEEEEECCCCCCCCh-HHHHHHHh--C----CCCEEEEEEC----ChHHHHHHHHhcC---CC--CCeEEEE---eeCCC
Confidence 4899999999 84 33333332 1 3469999994 3455655555442 11 1234433 23332
Q ss_pred CCc--------ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHh-cCCcEEEE-EecC
Q 043131 404 LDA--------SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKN-IKPDIFTV-AEQE 458 (592)
Q Consensus 404 l~~--------~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~-L~PkVvtl-vEqE 458 (592)
... ..+.. +...+|-+.+.||++.+. ....+|+.+++ |+|.=.++ .+..
T Consensus 140 ~~~~~~~~~~~~~~d~----~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDF----SRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHHHSHHHHHHCCT----TSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred chhhhccchhhccCCC----CCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 210 11211 245666677789998653 46677877755 99975444 4433
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=81.81 E-value=9.2 Score=35.38 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=62.1
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc------e
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV------E 390 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV------p 390 (592)
|++.+.....-.|+|+|.|.|. +...|+.+. |..++|||+. +...++...+++ +..++ .
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~~~~~ 85 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDV----SYRSLEIAQERL----DRLRLPRNQWER 85 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEES----CHHHHHHHHHHH----TTCCCCHHHHTT
T ss_pred HHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEEC----CHHHHHHHHHHH----HHhcCCcccCcc
Confidence 4444433344589999999996 555566542 3359999984 344555544443 22333 2
Q ss_pred eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEec
Q 043131 391 FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQ 457 (592)
Q Consensus 391 FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEq 457 (592)
++|.. .++..+.. ..+.-++++ |...||++.+ ..+..+|+.+ +-|+|.-++++..
T Consensus 86 v~~~~---~d~~~~~~-----~~~~fD~v~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 86 LQLIQ---GALTYQDK-----RFHGYDAAT--VIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEE---CCTTSCCG-----GGCSCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eEEEe---CCcccccc-----cCCCcCEEe--eHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 44442 12222221 101114554 4455777732 2456777766 5689998777644
No 37
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=81.58 E-value=7.4 Score=36.67 Aligned_cols=113 Identities=11% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEE
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEY 393 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF 393 (592)
...+++.+.....-+|+|+|.|.|.- ...|+.+- ..++|||+. +...++...+++.+. -..+|
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~----~~~l~~~~----~~~v~~vD~----s~~~~~~a~~~~~~~-----~~~~~ 144 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRI----TKNLLTKL----YATTDLLEP----VKHMLEEAKRELAGM-----PVGKF 144 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHH----HHHTHHHH----CSEEEEEES----CHHHHHHHHHHTTTS-----SEEEE
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHH----HHHHHHhh----cCEEEEEeC----CHHHHHHHHHHhccC-----CceEE
Confidence 35677777666677999999999873 33333321 237999984 344454443333211 23344
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.. .+++++. +. ++..=+|-|...||++.+ .....+|+.+ +.|+|.-.+++
T Consensus 145 ~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 145 IL---ASMETAT-----LP--PNTYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp EE---SCGGGCC-----CC--SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EE---ccHHHCC-----CC--CCCeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 32 2233322 21 122333444556788742 2345666655 67899766654
No 38
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=81.53 E-value=4.8 Score=39.36 Aligned_cols=23 Identities=9% Similarity=0.120 Sum_probs=18.4
Q ss_pred cccChHHHHHHHHcCCCccccCC
Q 043131 520 RHETLAQWRTRFSSAGFIPAHIG 542 (592)
Q Consensus 520 RhE~~~qWr~Rm~~AGF~pvpLs 542 (592)
+.-+.+.|+..|..+||+.+.+.
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEEee
Confidence 34467899999999999987654
No 39
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=81.42 E-value=14 Score=34.38 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=52.3
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...++. .....+|... .+.++.
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~------~~~~~~~~~~---d~~~~~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDI----SEVMIQKGKERG------EGPDLSFIKG---DLSSLP 111 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHTTT------CBTTEEEEEC---BTTBCS
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEEC----CHHHHHHHHhhc------ccCCceEEEc---chhcCC
Confidence 3489999999986 55566655 2 38999984 233443322221 1223344432 222221
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHH-HHhcCCcEEEEE
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSV-VKNIKPDIFTVA 455 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtlv 455 (592)
+. ++..=+|-|...||++. . ...+|+. .+-|+|.-++++
T Consensus 112 -----~~--~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 112 -----FE--NEQFEAIMAINSLEWTE---E-PLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp -----SC--TTCEEEEEEESCTTSSS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred -----CC--CCCccEEEEcChHhhcc---C-HHHHHHHHHHHhCCCeEEEE
Confidence 21 22344455556678873 2 3445554 477899766554
No 40
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=81.11 E-value=6.3 Score=39.80 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=62.0
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFe 392 (592)
+.|++.+.-.+..+|+|+|.|.|. +...|+.+- |.+++|+++.| ..++...+++ +..|+ .++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 236 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEMA-----GTVDTARSYL----KDEGLSDRVD 236 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECT-----THHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecCH-----HHHHHHHHHH----HhcCCCCceE
Confidence 467777765566799999999996 344444432 45799999852 2354444443 33444 255
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEecC
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQE 458 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEqE 458 (592)
|... ++.+ .+ +. ..=+|-+...||++.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 237 ~~~~---d~~~----~~---~~--~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 237 VVEG---DFFE----PL---PR--KADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEC---CTTS----CC---SS--CEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEeC---CCCC----CC---CC--CccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 5532 2211 01 11 1223334445777632 1234566665 5679976 4445654
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=80.62 E-value=8.1 Score=35.53 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=54.9
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ ++.|.- ..++++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~-------~~~~~~-----~d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDG----SPELAAEASRRL-------GRPVRT-----MLFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH-------TSCCEE-----CCGGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECC----CHHHHHHHHHhc-------CCceEE-----eeeccCC
Confidence 3479999999986 55566655 2 48999984 344454444333 444322 1233322
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+ ++..=+|-|...||++.. .....+|+.+ +.|+|.-++++.
T Consensus 99 -------~-~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 -------A-IDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -------C-CSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------C-CCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 223334445566787741 2355666665 668998777663
No 42
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=80.02 E-value=7 Score=40.73 Aligned_cols=119 Identities=11% Similarity=0.152 Sum_probs=65.2
Q ss_pred HHHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc---
Q 043131 313 ANQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--- 389 (592)
Q Consensus 313 ANQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--- 389 (592)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+. +...++...+++. ..|+
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~----s~~al~~Ar~n~~----~ngl~~~ 274 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDE----SPMAVASSRLNVE----TNMPEAL 274 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEES----CHHHHHHHHHHHH----HHCGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEEC----cHHHHHHHHHHHH----HcCCCcC
Confidence 34567888876666789999999995 444444442 3469999993 4555655555443 3343
Q ss_pred -eeEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 390 -EFEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 390 -pFeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
.++|.. .+-.+.+. .+.-+.++.|-.|.-..-.. ......+|+.+ +-|+|.=.+++.
T Consensus 275 ~~v~~~~--~D~~~~~~-------~~~fD~Ii~nppfh~~~~~~-~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 275 DRCEFMI--NNALSGVE-------PFRFNAVLCNPPFHQQHALT-DNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGEEEEE--CSTTTTCC-------TTCEEEEEECCCC--------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEe--chhhccCC-------CCCeeEEEECCCcccCcccC-HHHHHHHHHHHHHhCCCCcEEEEE
Confidence 355553 22222111 11125777776653221111 12334566666 558998777664
No 43
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=79.97 E-value=10 Score=36.72 Aligned_cols=109 Identities=12% Similarity=0.167 Sum_probs=61.0
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGF 396 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v 396 (592)
+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++...++ ++..|+..+|...
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~----s~~~~~~a~~~----~~~~~~~~~~~~~ 174 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDH----NENSIAFLNET----KEKENLNISTALY 174 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEES----CHHHHHHHHHH----HHHTTCCEEEEEC
T ss_pred HHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEEC----CHHHHHHHHHH----HHHcCCceEEEEe
Confidence 3334333355689999999996 55556665 2 48999984 34455444333 4455665555532
Q ss_pred ecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 397 VANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 397 ~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
++.++.. .+.-+.++.+ ..+|++. +..+..+|+.+ +.|+|.-++++
T Consensus 175 ---d~~~~~~------~~~fD~i~~~--~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 175 ---DINAANI------QENYDFIVST--VVFMFLN--RERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp ---CGGGCCC------CSCEEEEEEC--SSGGGSC--GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ---ccccccc------cCCccEEEEc--cchhhCC--HHHHHHHHHHHHHhcCCCcEEEE
Confidence 2333221 1111344444 4567763 23456777766 66799766443
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=79.85 E-value=7.6 Score=35.77 Aligned_cols=110 Identities=11% Similarity=0.049 Sum_probs=62.6
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
.|.+.+.....-+|+|+|.|.|. +...|+.+ | .++|||+. +...++...+++.. .+ .++|..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~----s~~~~~~a~~~~~~----~~-~~~~~~ 103 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDV----MPRAIGRACQRTKR----WS-HISWAA 103 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEES----CHHHHHHHHHHTTT----CS-SEEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEEC----CHHHHHHHHHhccc----CC-CeEEEE
Confidence 34445566677899999999995 55566655 2 48999984 34455544443321 22 344443
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.+++++. + ++..=+|-|...||++.+ +..+..+|+.+ +-|+|.-++++
T Consensus 104 ---~d~~~~~-------~-~~~fD~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 104 ---TDILQFS-------T-AELFDLIVVAEVLYYLED-MTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp ---CCTTTCC-------C-SCCEEEEEEESCGGGSSS-HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---cchhhCC-------C-CCCccEEEEccHHHhCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 2333332 1 123334444566788753 23344556555 67899866665
No 45
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=79.76 E-value=13 Score=36.62 Aligned_cols=104 Identities=14% Similarity=0.059 Sum_probs=57.3
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCccc
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLAD 403 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sled 403 (592)
.-+|+|+|.|.|. +...||.+ ..|..++|||+. +...++...++ ++..|+. .+|.. .++.+
T Consensus 119 ~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v~~~~---~d~~~ 181 (305)
T 3ocj_A 119 GCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDY----DPEALDGATRL----AAGHALAGQITLHR---QDAWK 181 (305)
T ss_dssp TCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEES----CHHHHHHHHHH----HTTSTTGGGEEEEE---CCGGG
T ss_pred CCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEEC----CHHHHHHHHHH----HHhcCCCCceEEEE---Cchhc
Confidence 4579999999885 44555422 235579999984 34455444333 3445554 55543 22333
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+.. . +..=+|-|...+|++.+. .....+|+.+ +.|+|.-.+++
T Consensus 182 ~~~---~-----~~fD~v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 182 LDT---R-----EGYDLLTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp CCC---C-----SCEEEEECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCc---c-----CCeEEEEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEE
Confidence 221 1 123333444557776432 2233466665 67899877776
No 46
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=79.35 E-value=12 Score=38.07 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=73.2
Q ss_pred HHHhhCChhHHHHHHHHHHHHhhh----CCC-CeeEEEecccCCCC--chHHHHHHHhcCCCCCCeeEEeecCCCCCCCh
Q 043131 298 QFYETCPYLKFAHFTANQAILEAF----DGK-RRVHVIDFSMNQGM--QWPALMQALALRPGGPPAFRLTGIGPPAADNT 370 (592)
Q Consensus 298 ~fye~~P~lkFAhftANQAILEA~----~g~-~~VHIIDfgI~~G~--QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~ 370 (592)
.+.+..|-++ ...-+|.+.|.-+ .++ ..=+|+|+|.|.|. .--.+.|.++ |..|||+|+ .+.
T Consensus 47 ~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD----~sp 115 (277)
T 3giw_A 47 AMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVD----NDP 115 (277)
T ss_dssp HHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEE----CCH
T ss_pred HHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEe----CCh
Confidence 4567788763 3334777766643 222 22379999999744 2233444442 457999998 345
Q ss_pred HHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC--------cccccccCCCCceEEEEeccchhcccCCCChHHHHHH
Q 043131 371 DQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD--------ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLS 442 (592)
Q Consensus 371 ~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~--------~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~ 442 (592)
..|+....+|.+. -.-..+|... .+.++. ...+++. +.++|-+...||+|.+...+...+=+
T Consensus 116 ~mLa~Ar~~l~~~---~~~~~~~v~a---D~~~~~~~l~~~~~~~~~D~~----~p~av~~~avLH~l~d~~~p~~~l~~ 185 (277)
T 3giw_A 116 IVLTLSQGLLAST---PEGRTAYVEA---DMLDPASILDAPELRDTLDLT----RPVALTVIAIVHFVLDEDDAVGIVRR 185 (277)
T ss_dssp HHHHTTHHHHCCC---SSSEEEEEEC---CTTCHHHHHTCHHHHTTCCTT----SCCEEEEESCGGGSCGGGCHHHHHHH
T ss_pred HHHHHHHHHhccC---CCCcEEEEEe---cccChhhhhcccccccccCcC----CcchHHhhhhHhcCCchhhHHHHHHH
Confidence 5666555555321 1113455432 233321 1223332 44455566679999654223344445
Q ss_pred HHHhcCCcEEEEE
Q 043131 443 VVKNIKPDIFTVA 455 (592)
Q Consensus 443 ~Ir~L~PkVvtlv 455 (592)
..+.|+|.=++++
T Consensus 186 l~~~L~PGG~Lvl 198 (277)
T 3giw_A 186 LLEPLPSGSYLAM 198 (277)
T ss_dssp HHTTSCTTCEEEE
T ss_pred HHHhCCCCcEEEE
Confidence 5677899754443
No 47
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=79.20 E-value=15 Score=34.58 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=58.5
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++|||+. +...++...++ .-..+|..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~----s~~~~~~a~~~--------~~~~~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDS----DDDMLEKAADR--------LPNTNFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEES----CHHHHHHHHHH--------STTSEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEEC----CHHHHHHHHHh--------CCCcEEEE
Confidence 46666655555689999999997555554443 2348999984 33444333332 11234432
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.+++++. + ++..=+|-|...||++. ....+|+.+ +-|+|.-.+++
T Consensus 85 ---~d~~~~~-------~-~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 85 ---ADLATWK-------P-AQKADLLYANAVFQWVP----DHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp ---CCTTTCC-------C-SSCEEEEEEESCGGGST----THHHHHHHHGGGEEEEEEEEE
T ss_pred ---CChhhcC-------c-cCCcCEEEEeCchhhCC----CHHHHHHHHHHhcCCCeEEEE
Confidence 2233322 1 12233333445678773 245666665 77899865554
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=78.52 E-value=8.6 Score=34.12 Aligned_cols=112 Identities=10% Similarity=0.056 Sum_probs=61.5
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce---
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--- 390 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--- 390 (592)
.+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~----~~~~~~~a~~~~----~~~~~~~~~ 103 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADI----NRRAIKLAKENI----KLNNLDNYD 103 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEES----CHHHHHHHHHHH----HHTTCTTSC
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEEC----CHHHHHHHHHHH----HHcCCCccc
Confidence 3556777765566789999999985 45556655 2 48999984 344554443333 344554
Q ss_pred eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 391 FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 391 FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
++|.. . ++.+... .+.-+.++.|.. +|+- ......+|+.+ +.|+|.-.+++.
T Consensus 104 ~~~~~--~-d~~~~~~------~~~~D~v~~~~~--~~~~---~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 104 IRVVH--S-DLYENVK------DRKYNKIITNPP--IRAG---KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp EEEEE--C-STTTTCT------TSCEEEEEECCC--STTC---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEE--C-chhcccc------cCCceEEEECCC--cccc---hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 55543 2 2222111 111246665544 3321 12345566655 668998666654
No 49
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=77.31 E-value=20 Score=34.34 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=64.0
Q ss_pred HHHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--
Q 043131 314 NQAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-- 390 (592)
Q Consensus 314 NQAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-- 390 (592)
-..+++.+. -...-+|+|+|.|.|. +...|+.+ +..++|||+. +...++...++ ++..|++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~ 97 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDF----LSGFIDIFNRN----ARQSGLQNR 97 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEES----CHHHHHHHHHH----HHHTTCTTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeC----CHHHHHHHHHH----HHHcCCCcC
Confidence 344555554 2345689999999885 66667766 3359999984 34455444433 3455654
Q ss_pred eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 391 FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 391 FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.+|.. .+++++. +. ++..=+|-|...+|++ + ...+|+.+ +-|+|.-.+++
T Consensus 98 v~~~~---~d~~~~~-----~~--~~~fD~i~~~~~~~~~-~----~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 98 VTGIV---GSMDDLP-----FR--NEELDLIWSEGAIYNI-G----FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp EEEEE---CCTTSCC-----CC--TTCEEEEEESSCGGGT-C----HHHHHHHHGGGEEEEEEEEE
T ss_pred cEEEE---cChhhCC-----CC--CCCEEEEEEcCCceec-C----HHHHHHHHHHHcCCCCEEEE
Confidence 55543 2333332 11 2234445555667877 2 35566655 67899865554
No 50
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=77.16 E-value=24 Score=33.27 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=64.0
Q ss_pred HHHHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCcee
Q 043131 312 TANQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEF 391 (592)
Q Consensus 312 tANQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpF 391 (592)
..-+.|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++|||+. +...++...+++. +-..
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~----s~~~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDL----SERMLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEES----CHHHHHHHHHHCC------CTTE
T ss_pred hhHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEEC----CHHHHHHHHHhhc------cCCe
Confidence 334567777766667789999999994 55556655 222 8999984 2344443333221 2233
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+|.. .+++++. .. ++..=+|-|...||++. ....+|+.+ +-|+|.-.+++.
T Consensus 93 ~~~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQ---KAIEDIA-----IE--PDAYNVVLSSLALHYIA----SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEE---CCGGGCC-----CC--TTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE---cchhhCC-----CC--CCCeEEEEEchhhhhhh----hHHHHHHHHHHHcCCCcEEEEE
Confidence 4432 2233322 11 22343444455678872 245666665 568998777763
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=77.10 E-value=29 Score=33.90 Aligned_cols=112 Identities=11% Similarity=0.079 Sum_probs=64.5
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|++ .+
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v~ 125 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTL----SENQYAHDKAM----FDEVDSPRRKE 125 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEEC----CHHHHHHHHHH----HHHSCCSSCEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEEC----CHHHHHHHHHH----HHhcCCCCceE
Confidence 446667655666789999999886 4444444422 58999984 34455444444 3445654 44
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCC-----CChHHHHHHHH-HhcCCcEEEEE
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQ-----PGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~-----~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
|.. .++.++ .+.-+.++.+ ..+|++.+. ......+|+.+ +-|+|.-.+++
T Consensus 126 ~~~---~d~~~~--------~~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 126 VRI---QGWEEF--------DEPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEE---CCGGGC--------CCCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEE---CCHHHc--------CCCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 442 233333 1112455544 457888652 13456777765 67899765554
No 52
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=76.68 E-value=32 Score=34.46 Aligned_cols=110 Identities=11% Similarity=0.096 Sum_probs=61.8
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-------eeEEeeeec
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-------EFEYRGFVA 398 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-------pFeF~~v~~ 398 (592)
.-+|+|+|.|.|. ++..++.+.+ -++|||+. +...++...++..+ .++ .++|.....
T Consensus 49 ~~~VLDlGCG~G~----~l~~~~~~~~----~~v~GiD~----S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGA----DLEKYFYGEI----ALLVATDP----DADAIARGNERYNK----LNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTT----THHHHHHTTC----SEEEEEES----CHHHHHHHHHHHHH----HCC----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcH----hHHHHHhcCC----CeEEEEEC----CHHHHHHHHHHHHh----ccccccccccccchhhhhc
Confidence 4579999999995 2222333322 37999994 45667666655432 232 245543211
Q ss_pred CCcccCCccccc-ccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 399 NSLADLDASMLE-IKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 399 ~sledl~~~~L~-lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
..+.....|. .-+ ++..=+|.|.+.||.+.... .+..+|+.+ +.|+|.=++++
T Consensus 113 --~~d~~~~~l~~~~~-~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 113 --RSDTFVSSVREVFY-FGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp --TSSSHHHHHHTTCC-SSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEE
T ss_pred --ccchhhhhhhcccc-CCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence 0111001110 001 23455777888999886543 346777766 67899877665
No 53
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=75.67 E-value=24 Score=34.81 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=60.5
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHH----cCceeEEeeeecCC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAES----IHVEFEYRGFVANS 400 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~----lgVpFeF~~v~~~s 400 (592)
+.-+|+|+|.|.|.- ...|+.++ ..++|||+. +...++...+++...... ....++|.. .+
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~---~D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDI----ADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT---AD 98 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEES----CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE---CC
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeC----CHHHHHHHHHHHHHhhhcccccccceEEEEE---ec
Confidence 456899999999873 34444432 348999984 345666665555432210 112344432 23
Q ss_pred cccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 401 LADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 401 ledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
++++.... .+...++..=+|-|.+.||.+.........+|+.+ +.|+|.-++++
T Consensus 99 ~~~~~~~~-~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 99 SSKELLID-KFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTTSCSTT-TCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccchhh-hcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 33322000 01111123334445567888743333456777776 66899876665
No 54
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=75.18 E-value=21 Score=34.50 Aligned_cols=106 Identities=15% Similarity=0.217 Sum_probs=56.9
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
+.+++.+.....-.|+|+|.|.|.- ...|+. ++ .++|||+. +...++...+++ -++. |.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~----~~~l~~-~~----~~v~gvD~----s~~~~~~a~~~~------~~~~--~~ 105 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQL----TEKIAQ-SG----AEVLGTDN----AATMIEKARQNY------PHLH--FD 105 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHH----HHHHHH-TT----CEEEEEES----CHHHHHHHHHHC------TTSC--EE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHH----HHHHHh-CC----CeEEEEEC----CHHHHHHHHhhC------CCCE--EE
Confidence 3455666555556899999999863 334443 23 58999984 334444333322 1333 33
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. .+.+++. . ++..=+|-|...||++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 106 ~---~d~~~~~-----~---~~~fD~v~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 106 V---ADARNFR-----V---DKPLDAVFSNAMLHWVKE----PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp E---CCTTTCC-----C---SSCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred E---CChhhCC-----c---CCCcCEEEEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEE
Confidence 2 1233322 1 112333344556787743 34555554 678998666653
No 55
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=74.90 E-value=18 Score=34.01 Aligned_cols=112 Identities=20% Similarity=0.347 Sum_probs=59.4
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGF 396 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v 396 (592)
+++.......-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..++..+|..
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~l~~a~~~~----~~~~~~v~~~~- 94 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDL----HEEMLRVARRKA----KERNLKIEFLQ- 94 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH----HHTTCCCEEEE-
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEEC----CHHHHHHHHHHH----HhcCCceEEEE-
Confidence 4444443445689999999995 44455554 2 48999984 345565554443 33455555543
Q ss_pred ecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEec
Q 043131 397 VANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQ 457 (592)
Q Consensus 397 ~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEq 457 (592)
..+.++. .. +.-++++ |.+..+.... ......+|+.+ +.|+|.-+++++-
T Consensus 95 --~d~~~~~-----~~-~~fD~v~--~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 95 --GDVLEIA-----FK-NEFDAVT--MFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --SCGGGCC-----CC-SCEEEEE--ECSSGGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CChhhcc-----cC-CCccEEE--EcCCchhcCC-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2232222 11 1112333 2222222221 22456666665 6689998887753
No 56
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=74.10 E-value=11 Score=38.00 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=23.3
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
.-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 189 ~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 189 LESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp CSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred CceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 4589999999995 455555442 4479999985
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=73.83 E-value=33 Score=30.04 Aligned_cols=61 Identities=10% Similarity=0.068 Sum_probs=39.4
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE 390 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp 390 (592)
+.+++.+.-...-+|+|+|.|.|. +...|+.+. |..++|||+. +...++...+++ +..|++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEI----SEERRERILSNA----INLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECS----CHHHHHHHHHHH----HTTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeC----CHHHHHHHHHHH----HHhCCC
Confidence 456666666666789999999884 555566553 4579999994 344554444433 345554
No 58
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=73.20 E-value=5.1 Score=37.85 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=48.9
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++ .|+.. ++|.. ....++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~--------~a~~~---~~~~~---~d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDI----NEDMIK--------FCEGK---FNVVK---SDAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECS----CHHHHH--------HHHTT---SEEEC---SCHHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEEC----CHHHHH--------HHHhh---cceee---ccHHHHh
Confidence 3579999999886 34555554 2 36899984 233333 33333 33332 1222110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
..+..+.=+.++ |...||++.+ ..+..+|+.+ +-|+|.-.+++
T Consensus 95 ---~~~~~~~fD~i~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 95 ---KSLPDKYLDGVM--ISHFVEHLDP--ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp ---HTSCTTCBSEEE--EESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEE
T ss_pred ---hhcCCCCeeEEE--ECCchhhCCc--HHHHHHHHHHHHHcCCCcEEEE
Confidence 011111113443 4456777742 2356667665 67899744443
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=72.48 E-value=17 Score=33.63 Aligned_cols=103 Identities=12% Similarity=0.144 Sum_probs=57.4
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADL 404 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl 404 (592)
+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++...+++ ...++..+|.. ..+.++
T Consensus 37 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~----s~~~~~~a~~~~----~~~~~~~~~~~---~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGN----LTENLCPK--F---KNTWAVDL----SQEMLSEAENKF----RSQGLKPRLAC---QDISNL 96 (246)
T ss_dssp CTTEEEEETCTTST----THHHHGGG--S---SEEEEECS----CHHHHHHHHHHH----HHTTCCCEEEC---CCGGGC
T ss_pred CCCeEEEeCCCCCH----HHHHHHHC--C---CcEEEEEC----CHHHHHHHHHHH----hhcCCCeEEEe---cccccC
Confidence 45689999999997 34455554 2 48999984 345555554443 33444445443 223322
Q ss_pred CcccccccCCCCceEEEEecc-chhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 405 DASMLEIKPSEVDSVAVNSVF-ELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f-~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. .. +..=+|-|.. .||++... .....+|+.+ +.|+|.-+++++
T Consensus 97 ~-----~~---~~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 97 N-----IN---RKFDLITCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C-----CS---CCEEEEEECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred C-----cc---CCceEEEEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 11 1222333444 67887432 2355666665 567998776663
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=71.87 E-value=33 Score=31.39 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=55.2
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+. +...++...+++ +..+...+|.. .++.++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~---~d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDI----SEDMIRKAREYA----KSRESNVEFIV---GDARKLS 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEES----CHHHHHHHHHHH----HHTTCCCEEEE---CCTTSCC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEEC----CHHHHHHHHHHH----HhcCCCceEEE---CchhcCC
Confidence 4579999999984 44555554 33 8999984 344554444433 23333445543 2233222
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+..+.-+.++.|.++.+|+.. ....+|+.+ +.|+|.-.+++
T Consensus 99 -----~~~~~~D~v~~~~~~~~~~~~----~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 -----FEDKTFDYVIFIDSIVHFEPL----ELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp -----SCTTCEEEEEEESCGGGCCHH----HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCCcEEEEEEcCchHhCCHH----HHHHHHHHHHHHcCCCcEEEE
Confidence 111112566666665555542 234566654 66899765554
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=71.43 E-value=7.2 Score=40.35 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=62.5
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
.|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||++. ...+ +.|+..+++..-..
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s----~~~~--------~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS----SGVA--------AKAREKGIRVRTDF 156 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC----HHHH--------HHHHTTTCCEECSC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC----HHHH--------HHHHHcCCCcceee
Confidence 45566654556689999999998 55666654 2 399999952 2233 45566566543221
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+.....+ .+... ++..=+|-+...|||+. ....+|+.+ +-|+|.-+++++
T Consensus 157 ~~~~~~~-----~l~~~--~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 157 FEKATAD-----DVRRT--EGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp CSHHHHH-----HHHHH--HCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred echhhHh-----hcccC--CCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEE
Confidence 1111111 11111 12344455556688884 256666666 667998777664
No 62
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=71.43 E-value=38 Score=30.21 Aligned_cols=110 Identities=17% Similarity=0.204 Sum_probs=60.0
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEY 393 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF 393 (592)
+.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..++ ..+|
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~ 84 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDK----NAMSIANVERIK----SIENLDNLHT 84 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH----HHHTCTTEEE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEEC----CHHHHHHHHHHH----HhCCCCCcEE
Confidence 456666654445599999999886 44455555 2 48999984 344554444433 23344 3444
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV 454 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl 454 (592)
.. ..+.++. . .+.-+.++. ...+|++. +.....+|+.+ +-|+|.-.++
T Consensus 85 ~~---~d~~~~~-----~-~~~~D~v~~--~~~l~~~~--~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 85 RV---VDLNNLT-----F-DRQYDFILS--TVVLMFLE--AKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EE---CCGGGCC-----C-CCCEEEEEE--ESCGGGSC--GGGHHHHHHHHHHTEEEEEEEE
T ss_pred EE---cchhhCC-----C-CCCceEEEE--cchhhhCC--HHHHHHHHHHHHHhcCCCeEEE
Confidence 43 1233221 1 111134443 34567763 23456677665 6679976543
No 63
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=70.65 E-value=39 Score=32.70 Aligned_cols=114 Identities=11% Similarity=0.036 Sum_probs=62.9
Q ss_pred HHHHhhh----CCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce
Q 043131 315 QAILEAF----DGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE 390 (592)
Q Consensus 315 QAILEA~----~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp 390 (592)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+. +...++...+++ +..|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~ 131 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNI----APVQNKRNEEYN----NQAGLA 131 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEES----CHHHHHHHHHHH----HHHTCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeC----CHHHHHHHHHHH----HhcCCC
Confidence 4455555 33455689999999987544444433 2 38999984 344555444443 333442
Q ss_pred --eEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecC
Q 043131 391 --FEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQE 458 (592)
Q Consensus 391 --FeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqE 458 (592)
++|.. .+++++. +. ++..=+|-|...||++.+ ...+|+.+ |-|+|.-.++ ++..
T Consensus 132 ~~~~~~~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 132 DNITVKY---GSFLEIP-----CE--DNSYDFIWSQDAFLHSPD----KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TTEEEEE---CCTTSCS-----SC--TTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cceEEEE---cCcccCC-----CC--CCCEeEEEecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEEec
Confidence 45543 2333321 21 223445555667888743 45566655 6689975544 4443
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=70.57 E-value=15 Score=33.31 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=60.1
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...++.+. .-++|||+. +...++...+++ +..++ ..+|.. .++.++.
T Consensus 46 ~~vLDlgcG~G~----~~~~~~~~~----~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~v~~~~---~d~~~~~ 106 (189)
T 3p9n_A 46 LAVLDLYAGSGA----LGLEALSRG----AASVLFVES----DQRSAAVIARNI----EALGLSGATLRR---GAVAAVV 106 (189)
T ss_dssp CEEEEETCTTCH----HHHHHHHTT----CSEEEEEEC----CHHHHHHHHHHH----HHHTCSCEEEEE---SCHHHHH
T ss_pred CEEEEeCCCcCH----HHHHHHHCC----CCeEEEEEC----CHHHHHHHHHHH----HHcCCCceEEEE---ccHHHHH
Confidence 469999999985 222233342 248999983 445565554443 33454 244432 2222221
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHh---cCCcEEEEEecCCCCC
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKN---IKPDIFTVAEQEANHN 462 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~---L~PkVvtlvEqEanhN 462 (592)
. ....+.-+.++.|..+ |... ...+.+|..+++ |+|.-++++|.+....
T Consensus 107 ~---~~~~~~fD~i~~~~p~--~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 107 A---AGTTSPVDLVLADPPY--NVDS---ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp H---HCCSSCCSEEEECCCT--TSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred h---hccCCCccEEEECCCC--Ccch---hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 1 0111122577777653 3211 245677877765 9999998887766543
No 65
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=69.98 E-value=24 Score=32.95 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=55.0
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~ 406 (592)
-.|+|+|.|.|. +...|+. +..++|||+. +...++...+++.+.- ..-..+|.. .++.++.+
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~----s~~~~~~a~~~~~~~~--~~~~v~~~~---~d~~~~~~ 129 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDI----SESALAKANETYGSSP--KAEYFSFVK---EDVFTWRP 129 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECS----CHHHHHHHHHHHTTSG--GGGGEEEEC---CCTTTCCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEEC----CHHHHHHHHHHhhccC--CCcceEEEE---CchhcCCC
Confidence 499999999985 4445554 2368999994 3445555444432210 112244443 22333221
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHH-hcCCcEEEEE
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVK-NIKPDIFTVA 455 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir-~L~PkVvtlv 455 (592)
++..=+|-|...||++. +.....+|+.++ .|+|.-.+++
T Consensus 130 --------~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 --------TELFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp --------SSCEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCCeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 11222333445577763 235667777765 5899876664
No 66
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=69.23 E-value=15 Score=32.27 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=57.6
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEe
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYR 394 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~ 394 (592)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+. +...++...+++ +..|+ ..+|.
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~~~~~ 88 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDY----LDGAIEVTKQNL----AKFNIKNCQII 88 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEEC----SHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeC----CHHHHHHHHHHH----HHcCCCcEEEE
Confidence 35555554455689999999987 4445554 3469999984 344554444433 34454 24443
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
. .++.+. + ..+.-+.++.+.. .....+|+.++++ |.-.+++
T Consensus 89 ~---~d~~~~----~--~~~~~D~i~~~~~----------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 89 K---GRAEDV----L--DKLEFNKAFIGGT----------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E---SCHHHH----G--GGCCCSEEEECSC----------SCHHHHHHHHHHT-TCCEEEE
T ss_pred E---CCcccc----c--cCCCCcEEEECCc----------ccHHHHHHHHhhC-CCCEEEE
Confidence 2 122221 1 1011245555544 2457899999888 7654443
No 67
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=68.55 E-value=25 Score=31.80 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=53.3
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEEeeeecCCcccC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEYRGFVANSLADL 404 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF~~v~~~sledl 404 (592)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+. +...++.+.+++ +..|+ .++|.. .+.+++
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~~~ 86 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDI----QDKAIANTTKKL----TDLNLIDRVTLIK---DGHQNM 86 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECS----CHHHHHHHHHHH----HHTTCGGGEEEEC---SCGGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEEC----CHHHHHHHHHHH----HHcCCCCCeEEEE---CCHHHH
Confidence 379999999994 3333444311 2238999994 445565554443 34455 345543 223332
Q ss_pred CcccccccCCCCceEEEEeccc---hhcccCCCChHHHHHHH-HHhcCCcEEEEE
Q 043131 405 DASMLEIKPSEVDSVAVNSVFE---LHKLLAQPGAIDKVLSV-VKNIKPDIFTVA 455 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~---LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtlv 455 (592)
.. . . ++.-+.++.|..+. -|.....+.....+|+. .+-|+|.-.+++
T Consensus 87 ~~-~--~-~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 87 DK-Y--I-DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GG-T--C-CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hh-h--c-cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 21 0 1 11125677776541 11122222223345554 466899755553
No 68
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=68.46 E-value=10 Score=37.24 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=60.2
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++|||+. +...++...+++.+....+...++|.
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALEL----STSVLAAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEES----CHHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEEC----CHHHHHHHHHHHhhcccccccceEEE
Confidence 345555554444 89999999998 55556655 2 58999984 34556555444432110110234444
Q ss_pred eeecCCcccCCcccccccCCCCce-EEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 395 GFVANSLADLDASMLEIKPSEVDS-VAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~Ea-LaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. .++.++. . + +.. +||.+...+|++. +..+..+|+.+ +.|+|.-.++++
T Consensus 139 ~---~d~~~~~-----~-~--~~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 139 Q---GDMSAFA-----L-D--KRFGTVVISSGSINELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp E---CBTTBCC-----C-S--CCEEEEEECHHHHTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred e---CchhcCC-----c-C--CCcCEEEECCcccccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3 2233322 1 1 122 2332333455442 22356777766 668998666653
No 69
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=67.29 E-value=5.4 Score=40.88 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=29.9
Q ss_pred HHHHhhhC-CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 315 QAILEAFD-GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 315 QAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~ 241 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDL 241 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeCh
Confidence 56777775 2445689999999996 445555442 4578999884
No 70
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=66.56 E-value=25 Score=37.94 Aligned_cols=122 Identities=11% Similarity=0.070 Sum_probs=67.2
Q ss_pred HHHHHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHH---HHHHHc
Q 043131 311 FTANQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLA---QLAESI 387 (592)
Q Consensus 311 ftANQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~---~fA~~l 387 (592)
+..-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+. +...++-..+++. +.++..
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDi----S~~~lelAr~n~e~frkr~~~~ 227 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEK----ADIPAKYAETMDREFRKWMKWY 227 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEEC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeC----CHHHHHHHHHHHHHHHHHHHHh
Confidence 3334567777765555679999999986 4444444332 237999984 3333433333332 234556
Q ss_pred Cc---eeEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 388 HV---EFEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 388 gV---pFeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
|+ .++|.. .++.++.... .+. .-.++++|..+ + .+.....+....|.|+|.-.+++
T Consensus 228 Gl~~~rVefi~---GD~~~lp~~d-~~~--~aDVVf~Nn~~--F----~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 228 GKKHAEYTLER---GDFLSEEWRE-RIA--NTSVIFVNNFA--F----GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp TBCCCEEEEEE---CCTTSHHHHH-HHH--TCSEEEECCTT--C----CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCCCeEEEE---CcccCCcccc-ccC--CccEEEEcccc--c----CchHHHHHHHHHHcCCCCcEEEE
Confidence 65 355542 2333332111 011 12578888653 2 12344556666789999877775
No 71
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=65.47 E-value=22 Score=34.30 Aligned_cols=110 Identities=12% Similarity=0.098 Sum_probs=59.4
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFe 392 (592)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++ +..|+ ..+
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~----s~~~~~~a~~~~----~~~~~~~~~~ 117 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTL----SKNQANHVQQLV----ANSENLRSKR 117 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHHH----HTCCCCSCEE
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEEC----CHHHHHHHHHHH----HhcCCCCCeE
Confidence 346666655556689999998886 4444553333 28999984 344454444333 33443 234
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
|.. .+++++. . .-+.|+.+ ..||++.. .....+|+.+ +-|+|.-.+++
T Consensus 118 ~~~---~d~~~~~------~--~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLL---AGWEQFD------E--PVDRIVSI--GAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEE---SCGGGCC------C--CCSEEEEE--SCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred EEE---CChhhCC------C--CeeEEEEe--CchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 432 2333332 1 11344433 45777742 2345566655 66899755543
No 72
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=65.36 E-value=17 Score=35.39 Aligned_cols=108 Identities=10% Similarity=0.070 Sum_probs=59.8
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGF 396 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v 396 (592)
|.+.+.... +|+|+|.|.|. |--.++.+ .|..+++|++ -+...++-+.++ |+..|+...++.
T Consensus 43 ~~~~l~~~~--~VLDlGCG~Gp----lAl~l~~~---~p~a~~~A~D----i~~~~leiar~~----~~~~g~~~~v~~- 104 (200)
T 3fzg_A 43 VFGNIKHVS--SILDFGCGFNP----LALYQWNE---NEKIIYHAYD----IDRAEIAFLSSI----IGKLKTTIKYRF- 104 (200)
T ss_dssp HHHHSCCCS--EEEEETCTTHH----HHHHHHCS---SCCCEEEEEC----SCHHHHHHHHHH----HHHSCCSSEEEE-
T ss_pred HHhhcCCCC--eEEEecCCCCH----HHHHHHhc---CCCCEEEEEe----CCHHHHHHHHHH----HHhcCCCccEEE-
Confidence 334443333 78999887663 54445443 3556999999 345556544444 566787754442
Q ss_pred ecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 397 VANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 397 ~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
. ++... . + .+..=+|=....||.|-++.+. .++.++.|+|.-+++.
T Consensus 105 -~----d~~~~---~-~-~~~~DvVLa~k~LHlL~~~~~a---l~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 105 -L----NKESD---V-Y-KGTYDVVFLLKMLPVLKQQDVN---ILDFLQLFHTQNFVIS 150 (200)
T ss_dssp -E----CCHHH---H-T-TSEEEEEEEETCHHHHHHTTCC---HHHHHHTCEEEEEEEE
T ss_pred -e----ccccc---C-C-CCCcChhhHhhHHHhhhhhHHH---HHHHHHHhCCCCEEEE
Confidence 1 11111 1 1 1222223333347888433333 4478889999988885
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=65.20 E-value=21 Score=32.98 Aligned_cols=93 Identities=9% Similarity=0.056 Sum_probs=51.7
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCcc
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDAS 407 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~~ 407 (592)
+|+|+|.|.|. +...|+.+ |+ ++|||+. +...++...+++.. ..+|.. ..++++.
T Consensus 45 ~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~----s~~~~~~a~~~~~~-------~v~~~~---~d~~~~~-- 99 (250)
T 2p7i_A 45 NLLELGSFKGD----FTSRLQEH--FN---DITCVEA----SEEAISHAQGRLKD-------GITYIH---SRFEDAQ-- 99 (250)
T ss_dssp CEEEESCTTSH----HHHHHTTT--CS---CEEEEES----CHHHHHHHHHHSCS-------CEEEEE---SCGGGCC--
T ss_pred cEEEECCCCCH----HHHHHHHh--CC---cEEEEeC----CHHHHHHHHHhhhC-------CeEEEE---ccHHHcC--
Confidence 59999999985 55566654 33 7999984 33444333332211 334432 2333321
Q ss_pred cccccCCCCceEEEEeccchhcccCCCChHHHHHHHHH--hcCCcEEEEE
Q 043131 408 MLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVK--NIKPDIFTVA 455 (592)
Q Consensus 408 ~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir--~L~PkVvtlv 455 (592)
+ ++..=+|-|...||++.+ .+.+|+.++ -|+|.-.+++
T Consensus 100 -----~-~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 -----L-PRRYDNIVLTHVLEHIDD----PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -----C-SSCEEEEEEESCGGGCSS----HHHHHHHHHHTTEEEEEEEEE
T ss_pred -----c-CCcccEEEEhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEE
Confidence 1 223334445567888743 356777765 6799755554
No 74
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=63.98 E-value=13 Score=33.15 Aligned_cols=106 Identities=12% Similarity=0.081 Sum_probs=58.5
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCccc
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLAD 403 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sled 403 (592)
.-.|+|+|.|.|. +...|+.++ .-++|||+. +...++.+.++ ++..|++ .+|.. .++.+
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~----~~~~~~~a~~~----~~~~~~~~~~~~~~---~d~~~ 92 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEK----NRKAQAIIQDN----IIMTKAENRFTLLK---MEAER 92 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHTT----CCEEEEECC----CHHHHHHHHHH----HHTTTCGGGEEEEC---SCHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEEC----CHHHHHHHHHH----HHHcCCCCceEEEE---CcHHH
Confidence 3479999999986 444455552 258999994 34555444333 3445654 45542 22222
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH---HhcCCcEEEEEecCCCC
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV---KNIKPDIFTVAEQEANH 461 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I---r~L~PkVvtlvEqEanh 461 (592)
..+ ... +.-+.++.|..+... ..+.++..+ +-|+|.-+++++.....
T Consensus 93 ~~~---~~~-~~fD~i~~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 93 AID---CLT-GRFDLVFLDPPYAKE-------TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHH---HBC-SCEEEEEECCSSHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hHH---hhc-CCCCEEEECCCCCcc-------hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 111 011 112466766554221 235566666 67899988887655543
No 75
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=63.71 E-value=39 Score=32.94 Aligned_cols=111 Identities=12% Similarity=0.072 Sum_probs=58.9
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCccc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLAD 403 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sled 403 (592)
...-+|+|+|.|.|. +...|+.+- ++..++|||+. +...++...+++.+. ....-..+|.. .++++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~----s~~~~~~a~~~~~~~-~~~~~~v~~~~---~d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDL----SATMIKTAEVIKEGS-PDTYKNVSFKI---SSSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEES----CHHHHHHHHHHHHHC-C-CCTTEEEEE---CCTTC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeC----CHHHHHHHHHHHHhc-cCCCCceEEEE---cCHHh
Confidence 356789999999985 444444321 13469999984 344555544443321 00123445543 23344
Q ss_pred CCccc-ccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 404 LDASM-LEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 404 l~~~~-L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+.... ..+. ++..=+|-|...||++ + ...+|+.+ +-|+|.-.+++
T Consensus 101 ~~~~~~~~~~--~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVD--KQKIDMITAVECAHWF-D----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTT--SSCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccccccc--CCCeeEEeHhhHHHHh-C----HHHHHHHHHHhcCCCcEEEE
Confidence 33211 0011 1244455566678888 2 45556554 66899766654
No 76
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=63.22 E-value=36 Score=35.07 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=76.2
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
++|++...-.+.-.|+|+|.|.|. +...|+.+ |. -++|||+.. ..++.. .+.++..|++ .+
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-----~~~~~a----~~~~~~~~~~~~v~ 115 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-----KMADHA----RALVKANNLDHIVE 115 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-----TTHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-----HHHHHH----HHHHHHcCCCCeEE
Confidence 445555444455689999999993 44555555 21 389999953 234332 2334455654 44
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecCCCC----CCCchH
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEANH----NGPVFL 467 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEanh----Nsp~Fl 467 (592)
|.. .+++++... +.-+.++.+.+ .|.+. ....++.+|..+ +-|+|.-+++...-.-+ ....+.
T Consensus 116 ~~~---~d~~~~~~~------~~~D~Iv~~~~--~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 183 (376)
T 3r0q_C 116 VIE---GSVEDISLP------EKVDVIISEWM--GYFLL-RESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIAD 183 (376)
T ss_dssp EEE---SCGGGCCCS------SCEEEEEECCC--BTTBT-TTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHH
T ss_pred EEE---CchhhcCcC------CcceEEEEcCh--hhccc-chHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHh
Confidence 442 234443321 11245555443 33332 334578889887 88999987775432211 122222
Q ss_pred H---HHHHHHHHHHHHhhhhhcc
Q 043131 468 D---RFTESLHYYSTMFDSLEGS 487 (592)
Q Consensus 468 ~---RF~EAL~yYsalFDSLea~ 487 (592)
. .|.+.+..+..+++..+..
T Consensus 184 ~~~~~~~~~~~~W~~fw~~~~~~ 206 (376)
T 3r0q_C 184 RKRNDFDGAMADWHNFSDEIKSY 206 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhhhhhhccCcc
Confidence 2 3445555555665444443
No 77
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=63.03 E-value=39 Score=29.55 Aligned_cols=102 Identities=18% Similarity=0.118 Sum_probs=55.2
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+- . ++|||+. +...++...++ .-..+|..
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~----s~~~~~~a~~~--------~~~v~~~~ 66 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDI----NVIALKEVKEK--------FDSVITLS 66 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECS----CHHHHHHHHHH--------CTTSEEES
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeC----CHHHHHHHHHh--------CCCcEEEe
Confidence 34555555566789999999987 445555442 2 9999994 33444433333 11223332
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. + +.+. ++..=+|-|...+|++.+ ...+|+.+ +.|+|.-.+++
T Consensus 67 --~----d-----~~~~--~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 67 --D----P-----KEIP--DNSVDFILFANSFHDMDD----KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp --S----G-----GGSC--TTCEEEEEEESCSTTCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred --C----C-----CCCC--CCceEEEEEccchhcccC----HHHHHHHHHHhcCCCCEEEE
Confidence 1 1 2222 222333344456777632 34555554 67899765554
No 78
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=63.01 E-value=46 Score=30.08 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=59.4
Q ss_pred HHHHHhhhCC-CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-cee
Q 043131 314 NQAILEAFDG-KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEF 391 (592)
Q Consensus 314 NQAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpF 391 (592)
.+.|++.+.. ...-+|+|+|.|.|. +...|+.+ + .++|||+. +...+ +.|+..+ -..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~----s~~~~--------~~a~~~~~~~~ 92 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-A----DRVTALDG----SAEMI--------AEAGRHGLDNV 92 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-S----SEEEEEES----CHHHH--------HHHGGGCCTTE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-C----CeEEEEeC----CHHHH--------HHHHhcCCCCe
Confidence 4567777652 333499999999986 44445544 2 48999984 23333 3344444 234
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+|.. .++.++ .. ++..=+|-|...||++.+ ..+..+|+.+ +-|+|.-.+++
T Consensus 93 ~~~~---~d~~~~------~~--~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 93 EFRQ---QDLFDW------TP--DRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EEEE---CCTTSC------CC--SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEe---cccccC------CC--CCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 4443 223222 11 223334445567888743 1246666665 67899755543
No 79
>1zs4_A Regulatory protein CII; helix-turn-helix, transcription activator, transcription-DNA; HET: DNA; 1.70A {Enterobacteria phage lambda} SCOP: a.35.1.9
Probab=62.25 E-value=2.8 Score=35.48 Aligned_cols=24 Identities=38% Similarity=0.609 Sum_probs=21.6
Q ss_pred chhhhhhhCCcccCCcHHHHHHHH
Q 043131 38 MDELLAVLGYNVRSSDMVEVAQKI 61 (592)
Q Consensus 38 ~d~~la~~gy~v~~~~m~~vaqkl 61 (592)
|-.|||+|||||...||+.++++.
T Consensus 52 ~~~lLa~Lglkvv~~e~~~~~k~~ 75 (83)
T 1zs4_A 52 FSMLLAVLEWGVVDDDMARLARQV 75 (83)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHH
Confidence 567999999999999999999875
No 80
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=61.84 E-value=18 Score=33.72 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=55.0
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCcccC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLADL 404 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sledl 404 (592)
-+|+|+|.+.|.- ...||.+- ++.-++|+|+. +...++.+.+++ +..|+. ++|.. . +..++
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~~v~~~~--~-d~~~~ 122 (221)
T 3u81_A 60 SLVLELGAYCGYS----AVRMARLL--QPGARLLTMEI----NPDCAAITQQML----NFAGLQDKVTILN--G-ASQDL 122 (221)
T ss_dssp SEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEES----CHHHHHHHHHHH----HHHTCGGGEEEEE--S-CHHHH
T ss_pred CEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeC----ChHHHHHHHHHH----HHcCCCCceEEEE--C-CHHHH
Confidence 3799999999863 23334321 23359999984 344555444443 344543 45542 2 11111
Q ss_pred Cccccc--ccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEEecCC
Q 043131 405 DASMLE--IKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQEA 459 (592)
Q Consensus 405 ~~~~L~--lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlvEqEa 459 (592)
-+. +. ...+.=+.++++... |+.. ....++..++-|+|.-+++++.-.
T Consensus 123 l~~-~~~~~~~~~fD~V~~d~~~--~~~~----~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 123 IPQ-LKKKYDVDTLDMVFLDHWK--DRYL----PDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GGG-TTTTSCCCCCSEEEECSCG--GGHH----HHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHH-HHHhcCCCceEEEEEcCCc--ccch----HHHHHHHhccccCCCeEEEEeCCC
Confidence 110 10 000112466666432 2221 123456656899999988885433
No 81
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=61.41 E-value=29 Score=30.60 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=25.4
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
.+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~ 76 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDL 76 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEES
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcC
Confidence 34455432 34489999999886 44455555 2 38999984
No 82
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=61.31 E-value=4.8 Score=34.55 Aligned_cols=42 Identities=19% Similarity=0.422 Sum_probs=31.1
Q ss_pred CCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 353 GPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 353 GPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
|||..|||...+.--.....|+++-..+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 677777666653211123578999999999999999999986
No 83
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=60.59 E-value=47 Score=30.69 Aligned_cols=109 Identities=14% Similarity=0.223 Sum_probs=58.5
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGF 396 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v 396 (592)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+. +...++...+++ +..+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~~ 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDL----SEEMLEIAQEKA----METNRHVDFWVQ 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEES----CHHHHHHHHHHH----HHTTCCCEEEEC
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEEC----CHHHHHHHHHhh----hhcCCceEEEEc
Confidence 44445433 479999999986 45566655 48999984 344555444443 233444455431
Q ss_pred ecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 397 VANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 397 ~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
.+.++. .. +.-+.++.++ -.+|++... .....+|+.+ +-|+|.-.++++
T Consensus 87 ---d~~~~~-----~~-~~fD~v~~~~-~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 87 ---DMRELE-----LP-EPVDAITILC-DSLNYLQTE-ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---CGGGCC-----CS-SCEEEEEECT-TGGGGCCSH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ChhhcC-----CC-CCcCEEEEeC-CchhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 222221 11 1113333322 156776432 2345566655 668998777764
No 84
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=59.69 E-value=88 Score=28.91 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=58.0
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEE
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEY 393 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF 393 (592)
.+++.+.-...-.|+|+|.|.|. +...||.+ + .++|||+. +...++...+ .++..|++ ++|
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~----s~~~~~~a~~----~~~~~g~~~~v~~ 108 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEP----RADRIENIQK----NIDTYGLSPRMRA 108 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHH----HHHHTTCTTTEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeC----CHHHHHHHHH----HHHHcCCCCCEEE
Confidence 35666655555679999999885 44556655 3 48999984 3455544433 34556765 555
Q ss_pred eeeecCCccc-CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 394 RGFVANSLAD-LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 394 ~~v~~~sled-l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.. . +..+ +.. .. .-++++++..+ ..+ +|+.+ +.|+|.-.+++
T Consensus 109 ~~--~-d~~~~~~~----~~--~~D~v~~~~~~----------~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 109 VQ--G-TAPAALAD----LP--LPEAVFIGGGG----------SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp EE--S-CTTGGGTT----SC--CCSEEEECSCC----------CHH-HHHHHHHHSCTTCEEEE
T ss_pred Ee--C-chhhhccc----CC--CCCEEEECCcc----------cHH-HHHHHHHhcCCCcEEEE
Confidence 43 2 2222 111 11 12466655422 234 66665 56899766555
No 85
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=59.58 E-value=13 Score=36.80 Aligned_cols=56 Identities=20% Similarity=0.336 Sum_probs=33.1
Q ss_pred HHHhhhCCC--CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHH
Q 043131 316 AILEAFDGK--RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQ 382 (592)
Q Consensus 316 AILEA~~g~--~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~ 382 (592)
.+++.+... +.-.|+|+|.+.|. +...|+.+-+ ..+||||+. +...++...+++..
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDi----s~~~i~~A~~~~~~ 92 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDI----DSRLIHSARQNIRH 92 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEES----CHHHHHHHHHTC--
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECC----CHHHHHHHHHHHHh
Confidence 345555433 34579999999994 4444555432 249999994 34556665555543
No 86
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=59.11 E-value=13 Score=35.86 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=61.7
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-ceeEEee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEFEYRG 395 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpFeF~~ 395 (592)
|++.+.....-+|+|+|.|.|. +...|+.+ |. ++|||+. +...++...+++.+.....+ ..++|..
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~~~ 115 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDA----SDKMLKYALKERWNRRKEPAFDKWVIEE 115 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEES----CHHHHHHHHHHHHHTTTSHHHHTCEEEE
T ss_pred HHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEEC----CHHHHHHHHHhhhhcccccccceeeEee
Confidence 3333333345689999999996 34445554 32 8999984 34556555554422111111 1223322
Q ss_pred eecCCcccCCcccccccCCCCceEEEEec-cchhcccC---CCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSV-FELHKLLA---QPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~-f~LH~Ll~---~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
..+.++.... .. ++..=+|-|. ..||++.+ .......+|+.+ +.|+|.-.++++
T Consensus 116 ---~d~~~~~~~~--~~--~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 116 ---ANWLTLDKDV--PA--GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ---CCGGGHHHHS--CC--TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cChhhCcccc--cc--CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 1222221111 11 2234444454 56888865 123356677766 668998666643
No 87
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=58.57 E-value=73 Score=29.75 Aligned_cols=102 Identities=15% Similarity=0.199 Sum_probs=54.8
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCccc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLAD 403 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sled 403 (592)
...-+|+|+|.|.|.- ...|+.+ + .++|||+. +...++...+++ +...-.++|.. .++++
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~---~d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDA----DAAMLEVFRQKI----AGVDRKVQVVQ---ADARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEES----CHHHHHHHHHHT----TTSCTTEEEEE---SCTTS
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEEC----CHHHHHHHHHHh----hccCCceEEEE---ccccc
Confidence 3455899999999873 3445544 2 48999984 344454443333 11222344443 22333
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+. +. ++..=+|-|...||++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~-----~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP-----LP--DESVHGVIVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC-----SC--TTCEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-----CC--CCCeeEEEECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 22 21 222333444556787742 34566554 678997666554
No 88
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=57.90 E-value=19 Score=36.83 Aligned_cols=102 Identities=16% Similarity=0.184 Sum_probs=57.8
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCcccC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLADL 404 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sledl 404 (592)
-.|+|+|.|.|. +...|+.+ +.-+++||+.. ..++... +.++..|++ .+|.. .+++++
T Consensus 68 ~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-----~~l~~a~----~~~~~~~~~~~v~~~~---~d~~~~ 127 (349)
T 3q7e_A 68 KVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-----SISDYAV----KIVKANKLDHVVTIIK---GKVEEV 127 (349)
T ss_dssp CEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-----THHHHHH----HHHHHTTCTTTEEEEE---SCTTTC
T ss_pred CEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-----HHHHHHH----HHHHHcCCCCcEEEEE---CcHHHc
Confidence 469999999995 55556665 23599999952 2343332 334455654 55543 234443
Q ss_pred CcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 405 DASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. +..+.=+.++.+++. |.+.. ....+.+|..+ |-|+|.-+++.+
T Consensus 128 ~-----~~~~~fD~Iis~~~~--~~l~~-~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 128 E-----LPVEKVDIIISEWMG--YCLFY-ESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp C-----CSSSCEEEEEECCCB--BTBTB-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred c-----CCCCceEEEEEcccc--ccccC-chhHHHHHHHHHHhCCCCCEEccc
Confidence 2 111111455555432 22222 34577888887 779999887743
No 89
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=57.59 E-value=28 Score=32.15 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=55.3
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|.--.. |+.+ + . -++|||+. +...++.+.+++ +..|+ ..+|.. .+..++.
T Consensus 56 ~~vLDlgcG~G~~~~~----l~~~-~-~--~~V~~vD~----s~~~l~~a~~~~----~~~~~~~v~~~~---~D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLE----ALSR-Y-A--AGATLIEM----DRAVSQQLIKNL----ATLKAGNARVVN---SNAMSFL 116 (202)
T ss_dssp CEEEETTCTTCHHHHH----HHHT-T-C--SEEEEECS----CHHHHHHHHHHH----HHTTCCSEEEEC---SCHHHHH
T ss_pred CeEEEeCCCcCHHHHH----HHhc-C-C--CEEEEEEC----CHHHHHHHHHHH----HHcCCCcEEEEE---CCHHHHH
Confidence 3799999998863322 2223 1 1 28999993 455565554443 34454 344432 1222211
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHh---cCCcEEEEEecCC
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKN---IKPDIFTVAEQEA 459 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~---L~PkVvtlvEqEa 459 (592)
+ ...+.-+.+++|..|. ....+.+++.+++ |+|.-+++++...
T Consensus 117 ~----~~~~~fD~V~~~~p~~-------~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 A----QKGTPHNIVFVDPPFR-------RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S----SCCCCEEEEEECCSSS-------TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred h----hcCCCCCEEEECCCCC-------CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 0111114666665532 1345678888876 9998777765443
No 90
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=57.06 E-value=11 Score=38.12 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=62.6
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEE
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEY 393 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF 393 (592)
.+.|++.+.....-+|+|+|.|.|. +...|+.+ + |..++|||+. +...++...+++ +..++..+|
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~----~~~~la~~--~-~~~~v~~vD~----s~~~l~~a~~~~----~~~~~~~~~ 249 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGV----LSVAFARH--S-PKIRLTLCDV----SAPAVEASRATL----AANGVEGEV 249 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSH----HHHHHHHH--C-TTCBCEEEES----BHHHHHHHHHHH----HHTTCCCEE
T ss_pred HHHHHHhcCcCCCCeEEEecCccCH----HHHHHHHH--C-CCCEEEEEEC----CHHHHHHHHHHH----HHhCCCCEE
Confidence 4667777743333479999999987 33344433 2 4468999984 344555544444 345666555
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccC-CCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLA-QPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~-~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. ..+-++.. .+.-+.++.|..| |.... .......+|+.+ +-|+|.-.+++.
T Consensus 250 ~--~~d~~~~~--------~~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 250 F--ASNVFSEV--------KGRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp E--ECSTTTTC--------CSCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred E--Eccccccc--------cCCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 22211111 1112466666654 32111 012345666665 668998766653
No 91
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=56.99 E-value=34 Score=30.48 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=51.8
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEeeeecCCcccCCc
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYRGFVANSLADLDA 406 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~~v~~~sledl~~ 406 (592)
+|+|+|.|.|. +...||.+ + .++|||+. +...++...+++. ..|+ ..+|.. ...+++..
T Consensus 25 ~vLDiGcG~G~----~~~~la~~-~----~~v~~vD~----s~~~l~~a~~~~~----~~~~~~v~~~~---~~~~~l~~ 84 (185)
T 3mti_A 25 IVVDATMGNGN----DTAFLAGL-S----KKVYAFDV----QEQALGKTSQRLS----DLGIENTELIL---DGHENLDH 84 (185)
T ss_dssp EEEESCCTTSH----HHHHHHTT-S----SEEEEEES----CHHHHHHHHHHHH----HHTCCCEEEEE---SCGGGGGG
T ss_pred EEEEEcCCCCH----HHHHHHHh-C----CEEEEEEC----CHHHHHHHHHHHH----HcCCCcEEEEe---CcHHHHHh
Confidence 69999999986 44456666 3 58999994 4556655555443 3344 234432 23333221
Q ss_pred ccccccCCCCceEEEEeccchhc----ccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHK----LLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~----Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. .++.=++++.|..+ +|. +...+.....+|+.+ +-|+|.-.+++
T Consensus 85 ~----~~~~fD~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 85 Y----VREPIRAAIFNLGY-LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp T----CCSCEEEEEEEEC------------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred h----ccCCcCEEEEeCCC-CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 1 11112466555322 221 111222334455544 77899866654
No 92
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=56.86 E-value=14 Score=37.35 Aligned_cols=42 Identities=12% Similarity=0.058 Sum_probs=27.0
Q ss_pred HHHhhh--CCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 316 AILEAF--DGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 316 AILEA~--~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
.|++.+ .=...-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 225 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQ 225 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEEC
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEecc
Confidence 455554 11233589999999996 455555442 4579999985
No 93
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=56.71 E-value=29 Score=33.15 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=28.6
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
+.|++.+.-...-+|+|+|.|.|. +...|+. |..++|||+.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~ 64 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEP 64 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECS
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeC
Confidence 446666655556689999999997 4444553 2369999995
No 94
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=56.45 E-value=23 Score=33.64 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=55.6
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
.-.|+|+|.|.|. +...|+.+ | .++|||+. +...++...+++. +| +|.. .++.++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~~a~~~~~------~~--~~~~---~d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLEL----SADMLAIARRRNP------DA--VLHH---GDMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEES----CHHHHHHHHHHCT------TS--EEEE---CCTTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEEC----CHHHHHHHHhhCC------CC--EEEE---CChHHCC
Confidence 3579999999995 56666665 3 28999984 3344444333321 33 3332 2233322
Q ss_pred cccccccCCCCceEEEEecc-chhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 406 ASMLEIKPSEVDSVAVNSVF-ELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f-~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. ++..=+|-|.+ .||++.. +.....+|+.+ +-|+|.-+++++
T Consensus 107 ~--------~~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L--------GRRFSAVTCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C--------SCCEEEEEECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c--------cCCcCEEEEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 12333444555 6788743 12355666665 668999888875
No 95
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=55.84 E-value=25 Score=32.19 Aligned_cols=18 Identities=11% Similarity=0.207 Sum_probs=15.2
Q ss_pred ChHHHHHHHHcCCCcccc
Q 043131 523 TLAQWRTRFSSAGFIPAH 540 (592)
Q Consensus 523 ~~~qWr~Rm~~AGF~pvp 540 (592)
+...|...|..+||+.+.
T Consensus 158 ~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp CHHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHCCCEEEE
Confidence 567899999999998775
No 96
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=54.74 E-value=48 Score=33.30 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=58.2
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLD 405 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~ 405 (592)
--.|+|+|.|.|. |--++ + |..+++|++- +...+ ..+.+++...|+++.|... + +.
T Consensus 106 p~~VLDlGCG~gp----Lal~~--~----~~~~y~a~DI----d~~~i----~~ar~~~~~~g~~~~~~v~--D----~~ 161 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYE--R----GIASVWGCDI----HQGLG----DVITPFAREKDWDFTFALQ--D----VL 161 (253)
T ss_dssp CSEEEEETCTTTH----HHHHH--T----TCSEEEEEES----BHHHH----HHHHHHHHHTTCEEEEEEC--C----TT
T ss_pred CCeEEEecCCccH----HHHHh--c----cCCeEEEEeC----CHHHH----HHHHHHHHhcCCCceEEEe--e----cc
Confidence 3489999998773 22222 2 5679999983 33334 4455566777999988742 1 11
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
...+ ++..+++.++- .+|+|-+.. ....++.+..|+|..|++.
T Consensus 162 ~~~~---~~~~DvvLllk--~lh~LE~q~--~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 162 CAPP---AEAGDLALIFK--LLPLLEREQ--AGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp TSCC---CCBCSEEEEES--CHHHHHHHS--TTHHHHHHHHCBCSEEEEE
T ss_pred cCCC---CCCcchHHHHH--HHHHhhhhc--hhhHHHHHHHhcCCCEEEE
Confidence 1111 11234555554 467774321 1244477779999988885
No 97
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=54.43 E-value=41 Score=30.48 Aligned_cols=44 Identities=36% Similarity=0.561 Sum_probs=32.6
Q ss_pred HHHHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 312 TANQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 312 tANQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
...+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~ 82 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDG 82 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEES
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcC
Confidence 345667777766566899999999994 56667766 2 38999984
No 98
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=54.37 E-value=67 Score=33.44 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=58.7
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADL 404 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl 404 (592)
+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++...+++ +..++..+|.. .++.+.
T Consensus 233 ~~~~VLDlGcG~G~----~~~~la~~--g---~~V~gvDi----s~~al~~A~~n~----~~~~~~v~~~~---~D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGA----LTLPLARM--G---AEVVGVED----DLASVLSLQKGL----EANALKAQALH---SDVDEA 292 (381)
T ss_dssp TTCEEEEETCTTST----THHHHHHT--T---CEEEEEES----BHHHHHHHHHHH----HHTTCCCEEEE---CSTTTT
T ss_pred CCCEEEEEeeeCCH----HHHHHHHc--C---CEEEEEEC----CHHHHHHHHHHH----HHcCCCeEEEE---cchhhc
Confidence 44589999999997 44445554 2 39999983 445565554443 44566666553 222222
Q ss_pred CcccccccCCCCceEEEEeccchhcccC-CCChHHHHHHH-HHhcCCcEEEEEe
Q 043131 405 DASMLEIKPSEVDSVAVNSVFELHKLLA-QPGAIDKVLSV-VKNIKPDIFTVAE 456 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~LH~Ll~-~~~~~~~~L~~-Ir~L~PkVvtlvE 456 (592)
... .+.-+.++.|..| |.-.. .......+++. .+.|+|.-.+++.
T Consensus 293 ~~~-----~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 293 LTE-----EARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp SCT-----TCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccc-----CCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 111 0112567777654 43211 12234556654 4678998777765
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=52.99 E-value=24 Score=32.48 Aligned_cols=116 Identities=13% Similarity=0.092 Sum_probs=59.5
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYRG 395 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~~ 395 (592)
.++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+. +...++.+.++..+-++..++ .++|..
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~----s~~~l~~~~~~a~~~~~~~~~~~v~~~~ 87 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGK----HPYKVARQN---PSRLVVALDA----DKSRMEKISAKAAAKPAKGGLPNLLYLW 87 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCH----HHHHHHHHC---TTEEEEEEES----CGGGGHHHHHHHTSCGGGTCCTTEEEEE
T ss_pred HHHHhhccCCCEEEEecCCCCH----HHHHHHHHC---CCCEEEEEEC----CHHHHHHHHHHHHHhhhhcCCCceEEEe
Confidence 4445555566789999999996 334444431 4479999984 334454443333333334454 345543
Q ss_pred eecCCcccCCcccccccCCCCceEEEEec-cch--hcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSV-FEL--HKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~-f~L--H~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
.+.+++. ...+. +.+.+... ..+ |++.+. ..+|+.+ +-|+|.-.+++.
T Consensus 88 ---~d~~~l~-----~~~~~-d~v~~~~~~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 88 ---ATAERLP-----PLSGV-GELHVLMPWGSLLRGVLGSS----PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ---CCSTTCC-----SCCCE-EEEEEESCCHHHHHHHHTSS----SHHHHHHHHTEEEEEEEEEE
T ss_pred ---cchhhCC-----CCCCC-CEEEEEccchhhhhhhhccH----HHHHHHHHHHcCCCcEEEEE
Confidence 2333332 11111 23333322 222 244332 3455554 678998877763
No 100
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=52.95 E-value=28 Score=32.56 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=22.6
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~ 78 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDF 78 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG-S----SEEEEEES
T ss_pred CeEEEeCCCCCH----HHHHHHHc-C----CEEEEEEC
Confidence 479999999997 56666666 2 48999984
No 101
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=50.77 E-value=1.2e+02 Score=31.75 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=61.1
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRG 395 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~ 395 (592)
+++.+.....-+|+|+|.|.|. +...||.+ + -+++||+. +.+.++...+++ +..|++ .+|..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~----~~~~la~~-~----~~V~gvD~----s~~al~~A~~n~----~~~~~~~v~f~~ 340 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGN----FTLPLATQ-A----ASVVGVEG----VPALVEKGQQNA----RLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTT----THHHHHTT-S----SEEEEEES----CHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCCH----HHHHHHhh-C----CEEEEEeC----CHHHHHHHHHHH----HHcCCCceEEEE
Confidence 4444443333479999999997 44455655 2 48999983 455665554443 445653 55543
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
.++++.-.. +....+.-+++++|-. +.+ .+.+++.|..++|+-++.+
T Consensus 341 ---~d~~~~l~~-~~~~~~~fD~Vv~dPP--------r~g-~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 341 ---ENLEEDVTK-QPWAKNGFDKVLLDPA--------RAG-AAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp ---CCTTSCCSS-SGGGTTCCSEEEECCC--------TTC-CHHHHHHHHHHCCSEEEEE
T ss_pred ---CCHHHHhhh-hhhhcCCCCEEEECCC--------Ccc-HHHHHHHHHhcCCCeEEEE
Confidence 223221111 1111111257776532 112 3468899999999998887
No 102
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=50.35 E-value=1.4e+02 Score=26.69 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=52.4
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCcc
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDAS 407 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~~ 407 (592)
.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..++.++|... ++.++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~~---d~~~~~-- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQ----SSVGLAKAKQLA----QEKGVKITTVQS---NLADFD-- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECS----SHHHHHHHHHHH----HHHTCCEEEECC---BTTTBS--
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEEC----CHHHHHHHHHHH----HhcCCceEEEEc---ChhhcC--
Confidence 89999999886 44556655 2 38999984 344554444443 333555555432 233321
Q ss_pred cccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 408 MLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 408 ~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+..+.-+.++.+. .++ .......+|+.+ +.|+|.-.+++.
T Consensus 90 ---~~~~~fD~v~~~~----~~~--~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 ---IVADAWEGIVSIF----CHL--PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp ---CCTTTCSEEEEEC----CCC--CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred ---CCcCCccEEEEEh----hcC--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1111124554432 222 122355666665 667998666653
No 103
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=50.34 E-value=50 Score=33.53 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=62.0
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
++|++.+...+.-+|+|+|.|.|. |...++.+. .-++|||+.. ..++.. .+.++..|+. .+
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s-----~~~~~a----~~~~~~~~l~~~v~ 102 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-----TMAQHA----EVLVKSNNLTDRIV 102 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS-----THHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH-----HHHHHH----HHHHHHcCCCCcEE
Confidence 678887765555689999999886 555566552 2489999852 123222 2233344542 44
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEEe
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAE 456 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlvE 456 (592)
|.. ..++++.. . +.-+.++.+.+ ++++.. ....+.+...-+-|+|.-+++.+
T Consensus 103 ~~~---~d~~~~~~-----~-~~~D~Ivs~~~--~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 103 VIP---GKVEEVSL-----P-EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEE---SCTTTCCC-----S-SCEEEEEECCC--BTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEE---cchhhCCC-----C-CceeEEEEeCc--hhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 432 23343321 1 11134444433 444432 23455555556788999877743
No 104
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=49.22 E-value=69 Score=28.99 Aligned_cols=106 Identities=22% Similarity=0.203 Sum_probs=57.8
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEE
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEY 393 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF 393 (592)
.+.|++.+. ...-+|+|+|.|.|. +...|+.+ + .++|||+. +...+ +.|+.... +|
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~~~~~D~----~~~~~--------~~~~~~~~--~~ 77 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G----TRVSGIEA----FPEAA--------EQAKEKLD--HV 77 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T----CEEEEEES----SHHHH--------HHHHTTSS--EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C----CeEEEEeC----CHHHH--------HHHHHhCC--cE
Confidence 355666665 556689999999984 66677766 2 58999984 22333 33443332 22
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. ..++.++. +.+. ++..=+|-|...||++.+ ...+|+.+ +-|+|.-.+++
T Consensus 78 ~---~~d~~~~~---~~~~--~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 78 V---LGDIETMD---MPYE--EEQFDCVIFGDVLEHLFD----PWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp E---ESCTTTCC---CCSC--TTCEEEEEEESCGGGSSC----HHHHHHHTGGGEEEEEEEEE
T ss_pred E---EcchhhcC---CCCC--CCccCEEEECChhhhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 2 22333221 1121 122223334456777643 35677766 56788755554
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=48.86 E-value=64 Score=29.69 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=56.8
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc-eeEEeeeecCCcccC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV-EFEYRGFVANSLADL 404 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV-pFeF~~v~~~sledl 404 (592)
.-.|+|+|.|.|. +...||.+. |..++|||+. +...++.+.+++ +..|+ ..+|.. .++.++
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~----s~~~l~~a~~~~----~~~~~~~v~~~~---~d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDI----QKSVLSYALDKV----LEVGVPNIKLLW---VDGSDL 103 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEES----CHHHHHHHHHHH----HHHCCSSEEEEE---CCSSCG
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEc----CHHHHHHHHHHH----HHcCCCCEEEEe---CCHHHH
Confidence 3469999999996 444444432 3469999984 345565544443 33454 244432 223332
Q ss_pred CcccccccCCCCceEEEEeccchhcccC--CCChHHHHHHHHH-hcCCcEEEEEecC
Q 043131 405 DASMLEIKPSEVDSVAVNSVFELHKLLA--QPGAIDKVLSVVK-NIKPDIFTVAEQE 458 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~LH~Ll~--~~~~~~~~L~~Ir-~L~PkVvtlvEqE 458 (592)
.. . +..+.-+.+++|.......... +......+|..+. .|+|.-+++++.+
T Consensus 104 ~~-~--~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 104 TD-Y--FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp GG-T--SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred Hh-h--cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 11 0 1111125777775321100000 0012356777764 5899977777543
No 106
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=48.72 E-value=64 Score=29.69 Aligned_cols=106 Identities=17% Similarity=0.184 Sum_probs=57.1
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc---eeEEeeeecCCccc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV---EFEYRGFVANSLAD 403 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV---pFeF~~v~~~sled 403 (592)
-.|+|+|.|.|.- ...++.+ + . -++|||+. +...++...+++ +..|+ ..+|.. .+..+
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~-~-~--~~v~gvD~----s~~~l~~a~~~~----~~~~~~~~~v~~~~---~d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR-Q-A--KKVTFLEL----DKTVANQLKKNL----QTLKCSSEQAEVIN---QSSLD 115 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT-T-C--SEEEEECS----CHHHHHHHHHHH----HHTTCCTTTEEEEC---SCHHH
T ss_pred CeEEEcCCccCHH----HHHHHHc-c-C--CEEEEEEC----CHHHHHHHHHHH----HHhCCCccceEEEE---CCHHH
Confidence 3689999999852 2223333 1 1 38999994 455665554444 34455 345442 12222
Q ss_pred CCcccccccCCC-CceEEEEeccchhcccCCCChHHHHHHHHHh---cCCcEEEEEecCCCC
Q 043131 404 LDASMLEIKPSE-VDSVAVNSVFELHKLLAQPGAIDKVLSVVKN---IKPDIFTVAEQEANH 461 (592)
Q Consensus 404 l~~~~L~lr~~~-~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~---L~PkVvtlvEqEanh 461 (592)
+.+ .+..+. -+.++.|..| | .+..+.+|+.+.+ |+|.-+++++.....
T Consensus 116 ~~~---~~~~~~~fD~I~~~~~~--~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 116 FLK---QPQNQPHFDVVFLDPPF--H-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HTT---SCCSSCCEEEEEECCCS--S-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHH---hhccCCCCCEEEECCCC--C-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 111 111111 1466666553 3 2346778888865 999877777655443
No 107
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=48.71 E-value=72 Score=30.95 Aligned_cols=31 Identities=19% Similarity=0.196 Sum_probs=23.8
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
+.-.|+|+|.|.|. ++..||.+ | .++|||+.
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~ 98 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEI 98 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECS
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEEC
Confidence 44589999999996 56667766 3 48999994
No 108
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=48.43 E-value=42 Score=34.21 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=73.2
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
+|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++- +...++-+ .+++..+|+++.|..
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DI----d~~~le~a----~~~l~~~g~~~~~~v 187 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDI----DARLVGFV----DEALTRLNVPHRTNV 187 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEES----BHHHHHHH----HHHHHHTTCCEEEEE
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeC----CHHHHHHH----HHHHHhcCCCceEEE
Confidence 46666644 3378999988774 2222222 247789999983 44555444 445567799987763
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE-ecCC-CCCCCchHHHHHHH
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA-EQEA-NHNGPVFLDRFTES 473 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv-EqEa-nhNsp~Fl~RF~EA 473 (592)
. |+....+ ++..+++.+| ..+|+|-++. ....++.+..|+|..|++. ++-+ +--++.|-
T Consensus 188 --~----D~~~~~p---~~~~DvaL~l--kti~~Le~q~--kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~------ 248 (281)
T 3lcv_B 188 --A----DLLEDRL---DEPADVTLLL--KTLPCLETQQ--RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMF------ 248 (281)
T ss_dssp --C----CTTTSCC---CSCCSEEEET--TCHHHHHHHS--TTHHHHHHHHSSCSEEEEEEECC-------CHH------
T ss_pred --e----eecccCC---CCCcchHHHH--HHHHHhhhhh--hHHHHHHHHHhCCCCEEEeccchhhcCCCcchh------
Confidence 2 2211111 1223455555 4478774421 2244589999999999885 4422 11223332
Q ss_pred HHHHHHHhhhh
Q 043131 474 LHYYSTMFDSL 484 (592)
Q Consensus 474 L~yYsalFDSL 484 (592)
..|+..|+..
T Consensus 249 -~~Y~~~~e~~ 258 (281)
T 3lcv_B 249 -QNYSQSFESQ 258 (281)
T ss_dssp -HHHHHHHHHH
T ss_pred -hHHHHHHHHH
Confidence 3567777664
No 109
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=47.98 E-value=1.3e+02 Score=27.49 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=18.5
Q ss_pred ccChHHHHHHHHcCCCccccCCh
Q 043131 521 HETLAQWRTRFSSAGFIPAHIGS 543 (592)
Q Consensus 521 hE~~~qWr~Rm~~AGF~pvpLs~ 543 (592)
.-+...|+..|+.+||+.+.+..
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEec
Confidence 34678999999999999887543
No 110
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=47.42 E-value=47 Score=35.75 Aligned_cols=114 Identities=17% Similarity=0.180 Sum_probs=62.5
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..++|||+.. ..++. ..+.++..|+. .+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s-----~~l~~----A~~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-----TMAQH----AEVLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECH-----HHHHH----HHHHHHHTTCTTTEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcH-----HHHHH----HHHHHHHcCCCCcEE
Confidence 467777654455689999999986 445666542 3599999842 23322 23334455653 45
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEEec
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAEQ 457 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlvEq 457 (592)
|.. .+++++. +. +.-+.++.|.+ ++++.. ....+.+....+-|+|.-+++.+.
T Consensus 211 ~~~---~d~~~~~-----~~-~~fD~Ivs~~~--~~~~~~-e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 211 VIP---GKVEEVS-----LP-EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEE---SCTTTCC-----CS-SCEEEEECCCC--HHHHTC-HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEE---CchhhCc-----cC-CCeEEEEEeCc--hHhcCc-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 543 2344332 11 11134554433 344432 223455555557889998887543
No 111
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=46.26 E-value=92 Score=31.81 Aligned_cols=134 Identities=9% Similarity=0.018 Sum_probs=70.9
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.+ +|..+||+|+. +...++...+++.+++..+ +-.++|.. . ...+.-
T Consensus 122 ~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDi----s~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~-D~~~~l 187 (334)
T 1xj5_A 122 KKVLVIGGGDGG----VLREVARH---ASIEQIDMCEI----DKMVVDVSKQFFPDVAIGYEDPRVNLVI--G-DGVAFL 187 (334)
T ss_dssp CEEEEETCSSSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGSTTEEEEE--S-CHHHHH
T ss_pred CEEEEECCCccH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHHHhhccccCCCcEEEEE--C-CHHHHH
Confidence 479999999986 56667665 34579999984 4556666666665543323 11244432 1 111110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFD 482 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFD 482 (592)
. ....+.=+++++|+....|... .-....+++.+ +.|+|.=++++..+.-...+.. +.+.+.-...+|.
T Consensus 188 ~---~~~~~~fDlIi~d~~~p~~~~~--~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 188 K---NAAEGSYDAVIVDSSDPIGPAK--ELFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCREIFK 257 (334)
T ss_dssp H---TSCTTCEEEEEECCCCTTSGGG--GGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHHHCS
T ss_pred H---hccCCCccEEEECCCCccCcch--hhhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHHhCc
Confidence 0 0111112577777643232110 00124566655 7789998888865554433322 3444444456665
No 112
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=45.57 E-value=96 Score=28.52 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=57.1
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
..|++.+.....-+|+|+|.|.|. +...|+.+ |. -++|||+. +...++...+++. .-+ ++|.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~----s~~~~~~a~~~~~----~~~--~~~~ 94 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDL----SEKMLARARAAGP----DTG--ITYE 94 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEES----CHHHHHHHHHTSC----SSS--EEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcC----CHHHHHHHHHhcc----cCC--ceEE
Confidence 456666665555689999999985 44555555 22 18999984 2334433322221 112 3333
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. .++.++. +. ++..=+|-|...||++. ....+|+.+ +-|+|.-.+++
T Consensus 95 ~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 95 R---ADLDKLH-----LP--QDSFDLAYSSLALHYVE----DVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp E---CCGGGCC-----CC--TTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred E---cChhhcc-----CC--CCCceEEEEeccccccc----hHHHHHHHHHHhcCcCcEEEE
Confidence 2 1222221 11 12222333445677763 245566655 66899865554
No 113
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=45.47 E-value=1.7e+02 Score=28.52 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=60.1
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eE
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FE 392 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--Fe 392 (592)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|+. .+
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v~ 143 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTL----SKNQHARCEQV----LASIDTNRSRQ 143 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHH----HHTSCCSSCEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEEC----CHHHHHHHHHH----HHhcCCCCceE
Confidence 456666655556689999999885 3344444322 38999984 34445444333 3344543 44
Q ss_pred EeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 393 YRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 393 F~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
|.. .+++++. +.-++++.+ ..||++.. .....+|+.+ +-|+|.-.+++
T Consensus 144 ~~~---~d~~~~~--------~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 144 VLL---QGWEDFA--------EPVDRIVSI--EAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEE---SCGGGCC--------CCCSEEEEE--SCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEE---CChHHCC--------CCcCEEEEe--ChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 432 2333332 112455444 45677632 2355666655 66899755543
No 114
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=45.31 E-value=2.8e+02 Score=29.12 Aligned_cols=102 Identities=16% Similarity=0.088 Sum_probs=57.7
Q ss_pred eeEEEecccCCC----CchHHHHHHHhcCCCC------CCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEE
Q 043131 326 RVHVIDFSMNQG----MQWPALMQALALRPGG------PPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEY 393 (592)
Q Consensus 326 ~VHIIDfgI~~G----~QWpsLiqaLA~RpgG------PP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF 393 (592)
.+.|.|||.+.| .-+-.+|+++..+... +|.+.+..-+.|..+.....+.+-.....+.+..|- +--|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 899999999999 4566778888776432 689999999998655332222222111222233332 1122
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCC
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQP 434 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~ 434 (592)
-.-+..++- .. +=| ++..=+|-+...||=|...|
T Consensus 133 ~~gvpgSFy---~r---lfp-~~S~d~v~Ss~aLHWls~~p 166 (384)
T 2efj_A 133 IGAMPGSFY---SR---LFP-EESMHFLHSCYCLHWLSQVP 166 (384)
T ss_dssp EEECCSCTT---SC---CSC-TTCEEEEEEESCTTBCSSSC
T ss_pred EEecchhhh---hc---cCC-CCceEEEEecceeeecCCCc
Confidence 221222321 11 113 35677888888999887654
No 115
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=44.13 E-value=86 Score=31.20 Aligned_cols=113 Identities=12% Similarity=0.056 Sum_probs=57.5
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-ceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpFeF~~v~~~sledl~ 405 (592)
-.|+|+|.|.|. +...|+.+ +|..+||+|+. +...++...+++.++++.+. -.++|.. .+..++.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~~ 162 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDI----DGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAFV 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEEC----CHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHH
Confidence 479999999986 56666655 34569999984 34556665555554444332 1234432 1111110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQE 458 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqE 458 (592)
.....+.=+++++|+... ......-....+++.+ +.|+|.-++++..+
T Consensus 163 ---~~~~~~~fDvIi~d~~~~--~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 163 ---RQTPDNTYDVVIIDTTDP--AGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp ---HSSCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---HhccCCceeEEEECCCCc--cccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 010111125777776432 1110000014566655 77899877776543
No 116
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=43.64 E-value=1e+02 Score=28.66 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=55.0
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCccc
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLAD 403 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sled 403 (592)
+.-.|+|+|.|.|. +...|+.+- ..++|||+. +...++...+++. .. +...+|.. ..+.+
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~~~---~d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDI----TEDFLVQAKTYLG----EEGKRVRNYFC---CGLQD 139 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEES----CHHHHHHHHHHTG----GGGGGEEEEEE---CCGGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeC----CHHHHHHHHHHhh----hcCCceEEEEE---cChhh
Confidence 35689999999986 555565543 248999984 3445544444332 22 22344442 22333
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+. .. ++..=+|-|...||++.+ ..+..+|+.+ +-|+|.-++++
T Consensus 140 ~~-----~~--~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 140 FT-----PE--PDSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CC-----CC--SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cC-----CC--CCCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 22 11 122223334456787743 1244666655 66899765554
No 117
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=42.98 E-value=1.7e+02 Score=27.88 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=25.3
Q ss_pred ceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 417 DSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 417 EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
..=+|-|.+.||++.........+|+.| |-|+|.=.+++
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 4566777788898754323455667666 56899866554
No 118
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=41.31 E-value=29 Score=34.44 Aligned_cols=52 Identities=10% Similarity=-0.040 Sum_probs=34.2
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHH
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWK 379 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~r 379 (592)
..|++.+.-...-+|+|+|.|.|. +...||.+ + -++|||+. +...++...++
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~----S~~ml~~Ar~~ 86 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDF----SQRMCDDLAEA 86 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEEC----CHHHHHHHHHH
Confidence 346666655556689999999886 45556655 3 38999984 34555544443
No 119
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=40.43 E-value=68 Score=30.58 Aligned_cols=105 Identities=10% Similarity=0.157 Sum_probs=55.2
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEEeeeecCCccc
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEYRGFVANSLAD 403 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF~~v~~~sled 403 (592)
.-+|+|+|.|.|.--.. |+.+. ..++|||+. +...++...+++ ...++ .++|.. .++.+
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~~ 125 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDI----AEVSINDARVRA----RNMKRRFKVFFRA---QDSYG 125 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEES----CHHHHHHHHHHH----HTSCCSSEEEEEE---SCTTT
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEEC----CHHHHHHHHHHH----HhcCCCccEEEEE---CCccc
Confidence 34799999999964333 44332 248999984 344554444433 33444 234432 22333
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+. +.+ ++..=+|-|.+.||++.........+|+.+ +-|+|.-.+++
T Consensus 126 ~~-----~~~-~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 126 RH-----MDL-GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp SC-----CCC-SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cc-----cCC-CCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 21 101 122223334455777543333456677765 66899866665
No 120
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=39.82 E-value=1.5e+02 Score=31.16 Aligned_cols=94 Identities=20% Similarity=0.313 Sum_probs=57.5
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCcc
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDAS 407 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~~ 407 (592)
.|+|+|.|.|. +...||.+ + -+++||+ .+.+.++...+++ +..|+..+|.. .+.+++.+.
T Consensus 293 ~VLDlgcG~G~----~sl~la~~-~----~~V~gvD----~s~~ai~~A~~n~----~~ngl~v~~~~---~d~~~~~~~ 352 (425)
T 2jjq_A 293 KILDMYSGVGT----FGIYLAKR-G----FNVKGFD----SNEFAIEMARRNV----EINNVDAEFEV---ASDREVSVK 352 (425)
T ss_dssp EEEEETCTTTH----HHHHHHHT-T----CEEEEEE----SCHHHHHHHHHHH----HHHTCCEEEEE---CCTTTCCCT
T ss_pred EEEEeeccchH----HHHHHHHc-C----CEEEEEE----CCHHHHHHHHHHH----HHcCCcEEEEE---CChHHcCcc
Confidence 68999999986 33445554 2 3899998 3455665554443 34466555543 233333221
Q ss_pred cccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEEe
Q 043131 408 MLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVAE 456 (592)
Q Consensus 408 ~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlvE 456 (592)
.. +++++|-. +.+..+.+++.++.++|+-++.+.
T Consensus 353 ----~f---D~Vv~dPP--------r~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 ----GF---DTVIVDPP--------RAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp ----TC---SEEEECCC--------TTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred ----CC---CEEEEcCC--------ccchHHHHHHHHHhcCCCcEEEEE
Confidence 22 47777632 123446799999999999888874
No 121
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=39.25 E-value=2.7e+02 Score=26.73 Aligned_cols=106 Identities=15% Similarity=0.162 Sum_probs=58.5
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCccc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLAD 403 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sled 403 (592)
.+.-.|+|+|.|.|. +...|+.+- |+..++|||+. +...++...++ ++..+...+|.. .++++
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~v~~~~---~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDS----GETLLAEAREL----FRLLPYDSEFLE---GDATE 83 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEES----CHHHHHHHHHH----HHSSSSEEEEEE---SCTTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEEC----CHHHHHHHHHH----HHhcCCceEEEE---cchhh
Confidence 456789999999994 455555542 23478999984 23444433333 344555556653 22333
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHH-HHhcCCcEEEE-EecC
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSV-VKNIKPDIFTV-AEQE 458 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtl-vEqE 458 (592)
+.. + +..=+|-|...||++.+ .+.+|+. .+-|+|.-.++ +|.+
T Consensus 84 ~~~------~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IEL------N--DKYDIAICHAFLLHMTT----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCC------S--SCEEEEEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCc------C--CCeeEEEECChhhcCCC----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 221 1 12333444455777643 2455555 47789976665 4544
No 122
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=39.08 E-value=46 Score=29.94 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=27.4
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
..-.|+|+|.|.|. +...|+.+ |+. ++|||+. +...++...+++
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~----s~~~~~~a~~~~ 85 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDY----SSVVVAAMQACY 85 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEES----CHHHHHHHHHHT
T ss_pred CCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeC----CHHHHHHHHHhc
Confidence 34579999999986 44455544 333 8999984 344554444443
No 123
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=38.57 E-value=1.5e+02 Score=26.48 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=53.8
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~ 406 (592)
-+|+|+|.|.|.-...++.. ++ .++|||+. +...++...+++. ..+..++|.. .+++++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~----~~----~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~~- 84 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVE----DG----YKTYGIEI----SDLQLKKAENFSR----ENNFKLNISK---GDIRKLP- 84 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHH----TT----CEEEEEEC----CHHHHHHHHHHHH----HHTCCCCEEE---CCTTSCC-
T ss_pred CEEEEECCCCCHHHHHHHHh----CC----CEEEEEEC----CHHHHHHHHHHHH----hcCCceEEEE---CchhhCC-
Confidence 47999999988754444422 22 48999984 3455555444433 2333344432 1233321
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
+. ++..=+|-|...+|++. +.....+|+.+ +.|+|.-++++
T Consensus 85 ----~~--~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 85 ----FK--DESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp ----SC--TTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CC--CCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEE
Confidence 21 12222333445577763 23455666655 67899866654
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=37.50 E-value=62 Score=30.70 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=23.9
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
..=+|+|+|.|.|. +...||.+. |..++|||+.
T Consensus 24 ~~~~vLDiGCG~G~----~~~~la~~~---~~~~v~GvD~ 56 (225)
T 3p2e_A 24 FDRVHIDLGTGDGR----NIYKLAIND---QNTFYIGIDP 56 (225)
T ss_dssp CSEEEEEETCTTSH----HHHHHHHTC---TTEEEEEECS
T ss_pred CCCEEEEEeccCcH----HHHHHHHhC---CCCEEEEEeC
Confidence 33479999999984 566666542 4479999995
No 125
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=36.02 E-value=2.7e+02 Score=26.97 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=53.1
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCCc
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~~ 406 (592)
.|+|+|.|.|. +...|+.+ + -++|||++. ...++ .|+.. +| +|.. .+.+++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s----~~ml~--------~a~~~~~v--~~~~---~~~e~~~- 94 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPG----EAQIR--------QALRHPRV--TYAV---APAEDTG- 94 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESC----HHHHH--------TCCCCTTE--EEEE---CCTTCCC-
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCc----HHhhh--------hhhhcCCc--eeeh---hhhhhhc-
Confidence 58999999995 44556654 2 379999852 33332 23322 33 3432 2334332
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE-EecCCCCCCC
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV-AEQEANHNGP 464 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl-vEqEanhNsp 464 (592)
+. ++..=+|-|...+|.+ + .+.+|..+ |-|+|.-+++ +........|
T Consensus 95 ----~~--~~sfD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 95 ----LP--PASVDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp ----CC--SSCEEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred ----cc--CCcccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 22 2334445555667875 2 34566655 6689987654 4443333333
No 126
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=36.02 E-value=1.3e+02 Score=28.02 Aligned_cols=47 Identities=11% Similarity=-0.037 Sum_probs=28.8
Q ss_pred CCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 322 DGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 322 ~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
...+.-.|+|+|.|.|.- ...|+.+ |+ -++|||+. +...++...+++
T Consensus 53 ~~~~~~~vLDlGcG~G~~----~~~l~~~--~~--~~v~gvD~----s~~~l~~a~~~~ 99 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIY----QLLSACE--SF--TEIIVSDY----TDQNLWELQKWL 99 (265)
T ss_dssp SSCCEEEEEEESCTTCCG----GGTTGGG--TE--EEEEEEES----CHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCccHH----HHHHhhc--cc--CeEEEecC----CHHHHHHHHHHH
Confidence 335567899999999852 2223322 22 58999984 345565554444
No 127
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=35.57 E-value=1.6e+02 Score=29.21 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=69.6
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-ceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.+. |.-+||+|+. +...++...+++.+++..++ -.+++.. . +..+.
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi----d~~~~~~a~~~~~~~~~~~~~~~v~~~~--~-D~~~~- 156 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEV----DGLVIEAARKYLKQTSCGFDDPRAEIVI--A-NGAEY- 156 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE--S-CHHHH-
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEEC----CHHHHHHHHHHhHhhccccCCCceEEEE--C-cHHHH-
Confidence 479999999986 566666653 3469999983 45566666666655543331 1234332 1 11110
Q ss_pred cccccccCCCCceEEEEeccc-hhcccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFE-LHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDS 483 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~-LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDS 483 (592)
+....+.-+.+++|.... .+.. . .-....+++.+ +.|+|.=+++++...-. .-.+.+.+.+......|..
T Consensus 157 ---l~~~~~~fD~Ii~d~~~~~~~~~-~-~l~~~~~l~~~~~~LkpgG~lv~~~~~~~---~~~~~~~~~~~~l~~~F~~ 228 (296)
T 1inl_A 157 ---VRKFKNEFDVIIIDSTDPTAGQG-G-HLFTEEFYQACYDALKEDGVFSAETEDPF---YDIGWFKLAYRRISKVFPI 228 (296)
T ss_dssp ---GGGCSSCEEEEEEEC------------CCSHHHHHHHHHHEEEEEEEEEECCCTT---TTHHHHHHHHHHHHHHCSE
T ss_pred ---HhhCCCCceEEEEcCCCcccCch-h-hhhHHHHHHHHHHhcCCCcEEEEEccCcc---cCHHHHHHHHHHHHHHCCc
Confidence 000011125777765422 1100 0 00124566655 67899988887632211 1244556666666666665
Q ss_pred hh
Q 043131 484 LE 485 (592)
Q Consensus 484 Le 485 (592)
..
T Consensus 229 v~ 230 (296)
T 1inl_A 229 TR 230 (296)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 128
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=33.61 E-value=2.1e+02 Score=30.49 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=61.3
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHH---HHHHHHHHHHcCce-
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQV---GWKLAQLAESIHVE- 390 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~et---G~rL~~fA~~lgVp- 390 (592)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+. +...++.. -+.+.+-++..|+.
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDi----s~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEI----MDDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEEC----CHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeC----CHHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 456777665555679999999998555444432 1248999984 33344333 12223444556642
Q ss_pred --eEEeeeecCCcccCCcccc--cccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 391 --FEYRGFVANSLADLDASML--EIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 391 --FeF~~v~~~sledl~~~~L--~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
++|. ..+.+.+ .+.+ ... .-++|++|..+ ++ +.....+-...+.|+|.-.+++
T Consensus 301 ~nV~~i--~gD~~~~--~~~~~~~~~--~FDvIvvn~~l-~~-----~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 301 NNVEFS--LKKSFVD--NNRVAELIP--QCDVILVNNFL-FD-----EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CCEEEE--ESSCSTT--CHHHHHHGG--GCSEEEECCTT-CC-----HHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEEE--EcCcccc--ccccccccC--CCCEEEEeCcc-cc-----ccHHHHHHHHHHhCCCCeEEEE
Confidence 4443 2222211 1111 011 12578887543 11 1122334455688999876665
No 129
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=32.88 E-value=58 Score=29.59 Aligned_cols=55 Identities=13% Similarity=0.062 Sum_probs=34.7
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
..+++.+.-...-.|+|+|.|.|. +...|+.+ + |..++|||+. +...++.+.+++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~----s~~~~~~a~~~~ 84 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALER----NPQYLGFIRDNL 84 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEEC----CHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeC----CHHHHHHHHHHH
Confidence 345666665666789999999886 33334433 1 3569999984 345555544443
No 130
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=32.83 E-value=64 Score=29.23 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=36.9
Q ss_pred HHHHhhhC--CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-e
Q 043131 315 QAILEAFD--GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-F 391 (592)
Q Consensus 315 QAILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-F 391 (592)
+.+++.+. -...-.|+|+|.|.|. +...|+.++ ..++|||+. +...++...++ ++..++. +
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~----s~~~~~~a~~~----~~~~~~~~v 111 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDI----SDESMTAAEEN----AALNGIYDI 111 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEES----CHHHHHHHHHH----HHHTTCCCC
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEEC----CHHHHHHHHHH----HHHcCCCce
Confidence 44444443 2344589999999984 344466542 358999984 34445444333 3445654 5
Q ss_pred EEe
Q 043131 392 EYR 394 (592)
Q Consensus 392 eF~ 394 (592)
+|.
T Consensus 112 ~~~ 114 (205)
T 3grz_A 112 ALQ 114 (205)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 131
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=32.46 E-value=1.6e+02 Score=26.48 Aligned_cols=101 Identities=13% Similarity=0.127 Sum_probs=51.9
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCee-EEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAF-RLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~L-RITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
.+++.+.. ..-.|+|+|.|.|. +...| + . ++|||+. +...++...+++ -++ +|.
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~----~~~v~~vD~----s~~~~~~a~~~~------~~~--~~~ 82 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGY----WLRRL----P----YPQKVGVEP----SEAMLAVGRRRA------PEA--TWV 82 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCH----HHHHC----C----CSEEEEECC----CHHHHHHHHHHC------TTS--EEE
T ss_pred HHHHHhcC-CCCeEEEECCCCCH----hHHhC----C----CCeEEEEeC----CHHHHHHHHHhC------CCc--EEE
Confidence 34555444 45589999999885 33333 1 3 8999984 334444333332 133 332
Q ss_pred eeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 395 GFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 395 ~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
. ..++++. +. ++..=+|-|...||++. ....+|+.+ +-|+|.-.+++
T Consensus 83 ~---~d~~~~~-----~~--~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 83 R---AWGEALP-----FP--GESFDVVLLFTTLEFVE----DVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp C---CCTTSCC-----SC--SSCEEEEEEESCTTTCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred E---cccccCC-----CC--CCcEEEEEEcChhhhcC----CHHHHHHHHHHHcCCCCEEEE
Confidence 2 2233321 21 12222333445677764 235566554 67899755544
No 132
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=32.08 E-value=1.3e+02 Score=29.96 Aligned_cols=136 Identities=12% Similarity=0.119 Sum_probs=69.0
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+. +...++...+++...+..+ +-.+++.. . ...+.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~ar~~~~~~~~~~~~~rv~v~~--~-Da~~~- 161 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKH---PSVESVVQCEI----DEDVIQVSKKFLPGMAIGYSSSKLTLHV--G-DGFEF- 161 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE--S-CHHHH-
T ss_pred CEEEEECCCchH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHhHHhhcccCCCcEEEEE--C-cHHHH-
Confidence 479999999986 55666665 24579999984 4556666666655543333 11233331 1 11110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSL 484 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDSL 484 (592)
+....+.-+.+++++...... ...-....+++.+ +.|+|.=+++++.......+ +.+.+...+...+|...
T Consensus 162 ---l~~~~~~fD~Ii~d~~~~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~f~~v 233 (304)
T 2o07_A 162 ---MKQNQDAFDVIITDSSDPMGP--AESLFKESYYQLMKTALKEDGVLCCQGECQWLHL---DLIKEMRQFCQSLFPVV 233 (304)
T ss_dssp ---HHTCSSCEEEEEEECC-------------CHHHHHHHHHEEEEEEEEEEEECTTTCH---HHHHHHHHHHHHHCSEE
T ss_pred ---HhhCCCCceEEEECCCCCCCc--chhhhHHHHHHHHHhccCCCeEEEEecCCcccch---HHHHHHHHHHHHhCCCc
Confidence 100111125777776432211 0000123456554 77899988888654433222 33344445556667654
Q ss_pred h
Q 043131 485 E 485 (592)
Q Consensus 485 e 485 (592)
.
T Consensus 234 ~ 234 (304)
T 2o07_A 234 A 234 (304)
T ss_dssp E
T ss_pred e
Confidence 3
No 133
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=31.96 E-value=1.3e+02 Score=29.49 Aligned_cols=137 Identities=13% Similarity=0.087 Sum_probs=69.9
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-ceeEEeeeecCCcccC
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEFEYRGFVANSLADL 404 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpFeF~~v~~~sledl 404 (592)
.-+|+|+|.|.|. +...++.++ |.-+||+|+. +...++...+++.+++..++ -.+++.. .+-.+-+
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEi----d~~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~~~l 142 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDI----DGKVIEYSKKFLPSIAGKLDDPRVDVQV--DDGFMHI 142 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEES----CHHHHHHHHHHCHHHHTTTTSTTEEEEE--SCSHHHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEEC----CHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHH
Confidence 3479999999985 566666553 4469999983 45566666666655433331 1233332 1111111
Q ss_pred CcccccccCCCCceEEEEeccchhcccCCCChHHHHHHH-HHhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhh
Q 043131 405 DASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSV-VKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDS 483 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~-Ir~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDS 483 (592)
. .. .+.-++++++... |.-....-....+++. .+.|+|.=++++....-.. -.+.+.+.+......|..
T Consensus 143 ~----~~-~~~fD~Ii~d~~~--~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~---~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 143 A----KS-ENQYDVIMVDSTE--PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF---TPELITNVQRDVKEIFPI 212 (275)
T ss_dssp H----TC-CSCEEEEEESCSS--CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHTTCSE
T ss_pred h----hC-CCCeeEEEECCCC--CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc---cHHHHHHHHHHHHHhCCC
Confidence 1 00 1112577776543 2111000011345554 4778999888876432111 145555555555566654
Q ss_pred hh
Q 043131 484 LE 485 (592)
Q Consensus 484 Le 485 (592)
..
T Consensus 213 v~ 214 (275)
T 1iy9_A 213 TK 214 (275)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 134
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=31.68 E-value=33 Score=30.88 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=28.2
Q ss_pred HHHhhhCC-CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 316 AILEAFDG-KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 316 AILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
.+++.+.. .+.-+|+|+|.|.|. +...|+.+- |..++|||+.
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~ 62 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDL 62 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEEC
T ss_pred HHHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEEC
Confidence 35555554 567899999999996 333333331 4579999984
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=31.31 E-value=84 Score=27.45 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=31.8
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
.+++.+.-...-+|+|+|.|.|. +...|+.+- .++|||+. +...++...+++
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~----~~~~~~~a~~~~ 75 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDR----NPEAISTTEMNL 75 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEES----CHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEEC----CHHHHHHHHHHH
Confidence 34444544455689999999885 444455442 58999984 344555444443
No 136
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=31.00 E-value=2.9e+02 Score=25.95 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=22.9
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
..-.|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~ 84 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDP 84 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEES
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeC
Confidence 44589999999986 55566655 2 48999984
No 137
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=30.86 E-value=68 Score=30.35 Aligned_cols=56 Identities=20% Similarity=0.213 Sum_probs=34.9
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHH
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLA 381 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~ 381 (592)
+++.+.+.....|+|+|.|.|. +.-.|+.+-. .|..+||||+. +...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~~-~~~~~v~gvDi----s~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLHR-RSLRQVIASDV----DPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHTG-GGEEEEEEEES----CHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHhc-cCCCeEEEEEC----CHHHHHHHHHHHH
Confidence 4455555567899999999994 3344443311 13579999983 4556665555443
No 138
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=30.48 E-value=77 Score=30.59 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=53.6
Q ss_pred CCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEeeeecCCcc
Q 043131 324 KRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRGFVANSLA 402 (592)
Q Consensus 324 ~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~v~~~sle 402 (592)
...-+|+|+|.|.|.--..|.+. + |..++|+|+. +...++.. .+-++.+|+. .+|.. .+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~----s~~~~~~a----~~~~~~~~l~~v~~~~---~d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDA----TRKKVAFV----ERAIEVLGLKGARALW---GRAE 140 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEES----CHHHHHHH----HHHHHHHTCSSEEEEE---CCHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEEC----CHHHHHHH----HHHHHHhCCCceEEEE---CcHH
Confidence 34458999999999844333332 1 4479999994 34445433 3334555664 55543 2344
Q ss_pred cCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 403 DLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 403 dl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
++..... .+ +.-+.++.+.+ ..++.++..+ +-|+|.=.+++
T Consensus 141 ~~~~~~~-~~-~~fD~I~s~a~----------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 141 VLAREAG-HR-EAYARAVARAV----------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp HHTTSTT-TT-TCEEEEEEESS----------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred Hhhcccc-cC-CCceEEEECCc----------CCHHHHHHHHHHHcCCCeEEEE
Confidence 4332100 00 01134444432 2345677765 56788765554
No 139
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=30.19 E-value=2.1e+02 Score=26.35 Aligned_cols=53 Identities=21% Similarity=0.187 Sum_probs=33.3
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCc--eeEEee
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHV--EFEYRG 395 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgV--pFeF~~ 395 (592)
.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ ++..|+ ..+|..
T Consensus 79 ~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~----s~~~~~~a~~~----~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 79 CDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDI----DPVKIALARNN----AEVYGIADKIEFIC 133 (241)
T ss_dssp CSEEEETTCTTSH----HHHHHHHT--T---CEEEEEES----CHHHHHHHHHH----HHHTTCGGGEEEEE
T ss_pred CCEEEECccccCH----HHHHHHHc--C---CEEEEEEC----CHHHHHHHHHH----HHHcCCCcCeEEEE
Confidence 3479999999995 44455544 2 68999994 34555544443 445566 456553
No 140
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=30.14 E-value=84 Score=30.93 Aligned_cols=133 Identities=11% Similarity=0.138 Sum_probs=64.6
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.+ +|..++|+|+. +...++...+++..++..+ +-.++|.. . +..+.
T Consensus 80 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~a~~~~~~~~~~~~~~~v~~~~--~-D~~~~- 144 (283)
T 2i7c_A 80 KNVLVVGGGDGG----IIRELCKY---KSVENIDICEI----DETVIEVSKIYFKNISCGYEDKRVNVFI--E-DASKF- 144 (283)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCTTTSGGGGSTTEEEEE--S-CHHHH-
T ss_pred CeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHhHHhccccCCCcEEEEE--C-ChHHH-
Confidence 479999999986 66666654 34579999984 3444544444332221111 11233331 1 11110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAI--DKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFD 482 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~--~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFD 482 (592)
+.-..+.-+++++++....+. ...+ ..+++.+ +.|+|.=++++....-... .+.+.+.+......|.
T Consensus 145 ---l~~~~~~fD~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~ 214 (283)
T 2i7c_A 145 ---LENVTNTYDVIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFK 214 (283)
T ss_dssp ---HHHCCSCEEEEEEECCCTTTG----GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTCS
T ss_pred ---HHhCCCCceEEEEcCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEECCCcccC---HHHHHHHHHHHHHHCC
Confidence 100011125777775432211 1111 5677766 6789998887754332222 2333333344444454
Q ss_pred hh
Q 043131 483 SL 484 (592)
Q Consensus 483 SL 484 (592)
..
T Consensus 215 ~v 216 (283)
T 2i7c_A 215 KV 216 (283)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 141
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=29.95 E-value=85 Score=28.54 Aligned_cols=55 Identities=13% Similarity=0.113 Sum_probs=34.2
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
.+++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++|+|+. +...++...+++
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~----~~~~~~~a~~~~ 122 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIER----IPELAEKAERTL 122 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEES----CHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeC----CHHHHHHHHHHH
Confidence 45555554455689999999887555555443 13458999984 344555544444
No 142
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=29.61 E-value=2.5e+02 Score=25.18 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=54.6
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEee
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRG 395 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~ 395 (592)
+++.+.-...-+|+|+|.|.|..= ..|+.+ + -++|||+. +...++...+++ +..|++ .+|..
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~----~~~~~~~a~~~~----~~~~~~~v~~~~ 131 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVER----IKGLQWQARRRL----KNLDLHNVSTRH 131 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEES----CHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEec----CHHHHHHHHHHH----HHcCCCceEEEE
Confidence 455555556668999999988633 333433 2 48999984 345555554444 334543 44432
Q ss_pred eecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHHHhcCCcEEEEE
Q 043131 396 FVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVVKNIKPDIFTVA 455 (592)
Q Consensus 396 v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~Ir~L~PkVvtlv 455 (592)
. +..+.... .+.-+.++++. .+|++.+ ...+.|+|.-.+++
T Consensus 132 --~-d~~~~~~~-----~~~~D~i~~~~--~~~~~~~---------~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 132 --G-DGWQGWQA-----RAPFDAIIVTA--APPEIPT---------ALMTQLDEGGILVL 172 (210)
T ss_dssp --S-CGGGCCGG-----GCCEEEEEESS--BCSSCCT---------HHHHTEEEEEEEEE
T ss_pred --C-CcccCCcc-----CCCccEEEEcc--chhhhhH---------HHHHhcccCcEEEE
Confidence 1 22221110 01114555553 4566643 35677888755554
No 143
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=29.21 E-value=63 Score=35.28 Aligned_cols=83 Identities=22% Similarity=0.315 Sum_probs=49.5
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcC-ceeEEeeeecCCccc
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIH-VEFEYRGFVANSLAD 403 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lg-VpFeF~~v~~~sled 403 (592)
+-+.|+|+|.|.|. |-..||.+ | -++|||+. ....++.. + ..|+.-| +..+|+.. +.++
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~----~~~~i~~a-~---~~a~~~~~~~~~~~~~---~~~~ 125 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDF----QQENINVC-R---ALAEENPDFAAEFRVG---RIEE 125 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHH-H---HHHHTSTTSEEEEEEC---CHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECC----CHHHHHHH-H---HHHHhcCCCceEEEEC---CHHH
Confidence 34789999999996 77778865 3 38999994 23344322 2 2344444 66777753 3344
Q ss_pred CCcccccccCCCCceEEEEeccchhcccC
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLA 432 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~ 432 (592)
+... .. ++..=+|-|+--|||+.+
T Consensus 126 ~~~~---~~--~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 126 VIAA---LE--EGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHH---CC--TTSCSEEEEESCHHHHHH
T ss_pred Hhhh---cc--CCCccEEEECcchhcCCC
Confidence 3211 11 123446667777899865
No 144
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=27.68 E-value=1.5e+02 Score=29.55 Aligned_cols=112 Identities=19% Similarity=0.140 Sum_probs=57.4
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEE
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEY 393 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF 393 (592)
+|++...-.+.-+|+|+|.|.|. |...++.+. .-+++||+.. ..++...+ .++..|+. .+|
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-----~~~~~a~~----~~~~~~~~~~i~~ 91 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-----SIIEMAKE----LVELNGFSDKITL 91 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-----THHHHHHH----HHHHTTCTTTEEE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-----HHHHHHHH----HHHHcCCCCCEEE
Confidence 44444332233489999999995 444555542 2489999852 23433322 23344543 344
Q ss_pred eeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEE
Q 043131 394 RGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 394 ~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
.. .+++++. +..+.-+.++.+.+ .+.+.. ...++.+|..+ +-|+|.-+++.
T Consensus 92 ~~---~d~~~~~-----~~~~~~D~Ivs~~~--~~~l~~-~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 92 LR---GKLEDVH-----LPFPKVDIIISEWM--GYFLLY-ESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EE---SCTTTSC-----CSSSCEEEEEECCC--BTTBST-TCCHHHHHHHHHHHEEEEEEEES
T ss_pred EE---Cchhhcc-----CCCCcccEEEEeCc--hhhccc-HHHHHHHHHHHHhhcCCCeEEEE
Confidence 32 2333332 11111134554433 233332 23466777766 67899877763
No 145
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=27.54 E-value=1.6e+02 Score=26.90 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=51.9
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccC
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADL 404 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl 404 (592)
+.-.|+|+|.|.|.-- ..|+.+ ++ ++|||+. +...++...+++ -+ .+|.. ..+.++
T Consensus 40 ~~~~vLdiG~G~G~~~----~~l~~~--~~---~v~~~D~----s~~~~~~a~~~~------~~--~~~~~---~d~~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGTGTHL----EHFTKE--FG---DTAGLEL----SEDMLTHARKRL------PD--ATLHQ---GDMRDF 95 (239)
T ss_dssp TCCEEEEETCTTSHHH----HHHHHH--HS---EEEEEES----CHHHHHHHHHHC------TT--CEEEE---CCTTTC
T ss_pred CCCeEEEecccCCHHH----HHHHHh--CC---cEEEEeC----CHHHHHHHHHhC------CC--CEEEE---CCHHHc
Confidence 4458999999999633 334433 22 8999984 334444333322 12 33332 122222
Q ss_pred CcccccccCCCCce-EEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 405 DASMLEIKPSEVDS-VAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 405 ~~~~L~lr~~~~Ea-LaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
. . + +.. +|+.+...+|++.. +.....+|+.+ +.|+|.-.++++
T Consensus 96 ~-----~-~--~~~D~v~~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 R-----L-G--RKFSAVVSMFSSVGYLKT-TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C-----C-S--SCEEEEEECTTGGGGCCS-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-----c-C--CCCcEEEEcCchHhhcCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 1 1 122 33322236777743 23455666665 678998877774
No 146
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=27.28 E-value=1.1e+02 Score=27.26 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=21.5
Q ss_pred EEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 328 HVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 328 HIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
.|+|+|.|.|. +...|+.+- ++|||+.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~ 52 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDL 52 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEES
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEEC
Confidence 89999999995 566666552 9999984
No 147
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=27.25 E-value=2.8e+02 Score=27.74 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=33.5
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
..|++++.-...-+|+|+|.|.|.. -..|+.+ + -++|||+. +.+.++...+++
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~l----T~~La~~-~----~~V~aVEi----d~~li~~a~~~~ 92 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGIL----TEELAKN-A----KKVYVIEI----DKSLEPYANKLK 92 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHH----HHHHHHH-S----SEEEEEES----CGGGHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCchHH----HHHHHhc-C----CEEEEEEC----CHHHHHHHHHHh
Confidence 3466666655566899999999974 4444444 2 38999984 344454444444
No 148
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=26.43 E-value=62 Score=30.17 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=52.1
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~ 406 (592)
-.|+|+|.|.|. +...|+.+ ++ ++|||+. +...++...+++ ..- ..+|.. .++.++..
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~----s~~~~~~a~~~~----~~~--~~~~~~---~d~~~~~~ 115 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDV----SKSALEIAAKEN----TAA--NISYRL---LDGLVPEQ 115 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEES----CHHHHHHHHHHS----CCT--TEEEEE---CCTTCHHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEEC----CHHHHHHHHHhC----ccc--CceEEE---Cccccccc
Confidence 459999999885 44445543 23 8999984 344454443332 111 234432 22333221
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcE-EEEEecC
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDI-FTVAEQE 458 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkV-vtlvEqE 458 (592)
.. .+..+ .-.-+|-+...+|++. +.....+|+.+ +.|+|.- ++++|..
T Consensus 116 ~~-~~~~~-~~~d~v~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 116 AA-QIHSE-IGDANIYMRTGFHHIP--VEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HH-HHHHH-HCSCEEEEESSSTTSC--GGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cc-ccccc-cCccEEEEcchhhcCC--HHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 10 01000 0022344445567763 23456666655 6689965 4556543
No 149
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=26.40 E-value=1.2e+02 Score=30.12 Aligned_cols=54 Identities=17% Similarity=0.113 Sum_probs=34.9
Q ss_pred HHHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 314 NQAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 314 NQAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
.+.|++++.-...-.|+|+|.|.|. +...|+.+ + -++|||+. +...++...+++
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~----lt~~La~~-~----~~v~~vDi----~~~~~~~a~~~~ 84 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGN----LTVKLLPL-A----KKVITIDI----DSRMISEVKKRC 84 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTST----THHHHTTT-S----SEEEEECS----CHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcH----HHHHHHhc-C----CEEEEEEC----CHHHHHHHHHHH
Confidence 3456666655555589999999998 44556655 2 38999994 345554444443
No 150
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=25.58 E-value=2.4e+02 Score=29.16 Aligned_cols=66 Identities=23% Similarity=0.182 Sum_probs=41.3
Q ss_pred CeeEE-Eeccc--------------CCCC---chHHHHHHHhcCCCCCCeeEEeecCCC-CC--CChHHHHHHHHHHHHH
Q 043131 325 RRVHV-IDFSM--------------NQGM---QWPALMQALALRPGGPPAFRLTGIGPP-AA--DNTDQLQQVGWKLAQL 383 (592)
Q Consensus 325 ~~VHI-IDfgI--------------~~G~---QWpsLiqaLA~RpgGPP~LRITgIg~p-~~--~~~~~L~etG~rL~~f 383 (592)
-+||| ||-|+ ..|+ ++..+++.++.. |.|+|.||..- .+ .+.+...+.-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 47888 88886 4676 677888877664 45999999643 11 2234444444555555
Q ss_pred HHH----cCceeEEe
Q 043131 384 AES----IHVEFEYR 394 (592)
Q Consensus 384 A~~----lgVpFeF~ 394 (592)
++. .|+++++-
T Consensus 209 ~~~l~~~~g~~~~~l 223 (428)
T 2j66_A 209 GRNIYERYGIVCECI 223 (428)
T ss_dssp HHHHHHHHCCCCSEE
T ss_pred HHHHHHHhCCCCCEE
Confidence 544 47766553
No 151
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=25.53 E-value=40 Score=32.30 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=32.1
Q ss_pred CCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEee
Q 043131 353 GPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRG 395 (592)
Q Consensus 353 GPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~ 395 (592)
|||..|||...+.--.....|+++-..+.+..+..|..|.|+-
T Consensus 133 gaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r 175 (188)
T 1yz7_A 133 GAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLR 175 (188)
T ss_dssp STTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE
Confidence 6777777777642111235788899999999999999999985
No 152
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=25.24 E-value=96 Score=31.31 Aligned_cols=135 Identities=10% Similarity=0.103 Sum_probs=65.6
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+. +...++...+++.+++..+ +-.++|.. . ...+.
T Consensus 110 ~~VLdIG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~Ar~~~~~~~~~~~~~rv~~~~--~-D~~~~- 174 (314)
T 2b2c_A 110 KRVLIIGGGDGG----ILREVLKH---ESVEKVTMCEI----DEMVIDVAKKFLPGMSCGFSHPKLDLFC--G-DGFEF- 174 (314)
T ss_dssp CEEEEESCTTSH----HHHHHTTC---TTCCEEEEECS----CHHHHHHHHHHCTTTSGGGGCTTEEEEC--S-CHHHH-
T ss_pred CEEEEEcCCcCH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHHHHhccccCCCCEEEEE--C-hHHHH-
Confidence 479999999986 55666655 34579999994 3445544444432221111 11233332 1 11110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChH-HHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAI-DKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDS 483 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~-~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDS 483 (592)
+.-..+.-+++++|.... +.....-. ..+++.+ +.|+|.=+++++.+.-.. -.+.+.....+...+|..
T Consensus 175 ---l~~~~~~fD~Ii~d~~~~---~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 175 ---LKNHKNEFDVIITDSSDP---VGPAESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp ---HHHCTTCEEEEEECCC----------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSE
T ss_pred ---HHhcCCCceEEEEcCCCC---CCcchhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCc
Confidence 100111125777766321 11100111 4566654 678999888876532221 234455666667777765
Q ss_pred hh
Q 043131 484 LE 485 (592)
Q Consensus 484 Le 485 (592)
..
T Consensus 246 v~ 247 (314)
T 2b2c_A 246 VT 247 (314)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 153
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=25.11 E-value=3.1e+02 Score=24.95 Aligned_cols=53 Identities=6% Similarity=0.011 Sum_probs=32.1
Q ss_pred eeEEEecccC-CCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 326 RVHVIDFSMN-QGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 326 ~VHIIDfgI~-~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
.-.|+|+|.| .|. +...|+.+. ..++|||+. +...++.+.++ ++..|+.++|.
T Consensus 56 ~~~vLDlG~G~~G~----~~~~la~~~----~~~v~~vD~----s~~~~~~a~~~----~~~~~~~v~~~ 109 (230)
T 3evz_A 56 GEVALEIGTGHTAM----MALMAEKFF----NCKVTATEV----DEEFFEYARRN----IERNNSNVRLV 109 (230)
T ss_dssp SCEEEEECCTTTCH----HHHHHHHHH----CCEEEEEEC----CHHHHHHHHHH----HHHTTCCCEEE
T ss_pred CCEEEEcCCCHHHH----HHHHHHHhc----CCEEEEEEC----CHHHHHHHHHH----HHHhCCCcEEE
Confidence 4579999999 886 333344332 258999984 44555544443 34556655554
No 154
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=24.79 E-value=1.2e+02 Score=30.49 Aligned_cols=133 Identities=11% Similarity=0.138 Sum_probs=66.8
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc-CceeEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI-HVEFEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l-gVpFeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|. +...|+.++ |..++|+|+. +...++...+++.+++..+ +-.++|.. . +..+.
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi----s~~~l~~ar~~~~~~~~~~~~~~v~~~~--~-D~~~~- 182 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---SVENIDICEI----DETVIEVSKIYFKNISCGYEDKRVNVFI--E-DASKF- 182 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---TCCEEEEEES----CHHHHHHHHHHCTTTSGGGGSTTEEEEE--S-CHHHH-
T ss_pred CEEEEEcCCccH----HHHHHHHcC---CCCEEEEEEC----CHHHHHHHHHHHHhhccccCCCcEEEEE--c-cHHHH-
Confidence 479999999986 566666553 4579999983 3455555444443321112 11233332 1 11110
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhh
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAI--DKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFD 482 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~--~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFD 482 (592)
+.-..+.-+++++|.....+. .... ..+++.+ +.|+|.-+++++....... .+.+.+.+......|.
T Consensus 183 ---l~~~~~~fDvIi~d~~~p~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~ 252 (321)
T 2pt6_A 183 ---LENVTNTYDVIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFK 252 (321)
T ss_dssp ---HHHCCSCEEEEEEECCCSSSG----GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC---HHHHHHHHHHHHTTCS
T ss_pred ---HhhcCCCceEEEECCcCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHHHHHCC
Confidence 000011125777776322211 0111 5666665 6789998888875433222 2334444444444555
Q ss_pred hh
Q 043131 483 SL 484 (592)
Q Consensus 483 SL 484 (592)
..
T Consensus 253 ~v 254 (321)
T 2pt6_A 253 KV 254 (321)
T ss_dssp EE
T ss_pred Ce
Confidence 44
No 155
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=24.68 E-value=58 Score=29.86 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=30.2
Q ss_pred CcHHHHHHHHHHHHhhCCHHHHHHHHHHhhccccCCCC
Q 043131 224 IRLVHALMACAEAVQQNNLTLAEAFVKQIRFLAVSQAG 261 (592)
Q Consensus 224 ~~Lv~LLlaCAeAV~~gd~~~A~~lL~~L~~las~~g~ 261 (592)
-.+=+.|-+|+++++.||+..|+.||..-+ +..+.|+
T Consensus 56 ~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gd 92 (137)
T 2ksn_A 56 KEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGA 92 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCC
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCc
Confidence 347789999999999999999999999765 3445555
No 156
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=24.67 E-value=67 Score=30.87 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=28.2
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
+.|++++.-...-+|+|+|.|.|. +...|+.+. -++|||+.
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~ 60 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEI 60 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECS
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEEC
Confidence 445666654455689999999997 445555442 48999994
No 157
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=24.39 E-value=89 Score=29.86 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=33.3
Q ss_pred CCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHH
Q 043131 322 DGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQL 383 (592)
Q Consensus 322 ~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~f 383 (592)
...+...|+|+|.|.|. ++..||.+. |..+++||+. +...++.+.+++.+.
T Consensus 43 ~~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDi----s~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 43 RAQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEI----RVKVSDYVQDRIRAL 93 (235)
T ss_dssp ---CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEES----CHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEEC----CHHHHHHHHHHHHHH
Confidence 34556789999999986 556677652 3468999984 455666666655443
No 158
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=24.34 E-value=1.5e+02 Score=25.89 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=55.5
Q ss_pred eeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCccc
Q 043131 326 RVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLAD 403 (592)
Q Consensus 326 ~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sled 403 (592)
.-+|+|+|.|.|. +...++.+. .-++|||+. +...++...+++ +..++. .+|.. .++.+
T Consensus 45 ~~~vLD~GcG~G~----~~~~~~~~~----~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~~~~~~~---~d~~~ 105 (187)
T 2fhp_A 45 GGMALDLYSGSGG----LAIEAVSRG----MDKSICIEK----NFAALKVIKENI----AITKEPEKFEVRK---MDANR 105 (187)
T ss_dssp SCEEEETTCTTCH----HHHHHHHTT----CSEEEEEES----CHHHHHHHHHHH----HHHTCGGGEEEEE---SCHHH
T ss_pred CCCEEEeCCccCH----HHHHHHHcC----CCEEEEEEC----CHHHHHHHHHHH----HHhCCCcceEEEE---CcHHH
Confidence 3489999999987 333344442 258999984 345555544443 333442 45543 12222
Q ss_pred CCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH---HhcCCcEEEEEecCCCC
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV---KNIKPDIFTVAEQEANH 461 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I---r~L~PkVvtlvEqEanh 461 (592)
.... +....+.-+.++.|..+..+ ..+.++..+ +-|+|.-+++++.....
T Consensus 106 ~~~~-~~~~~~~fD~i~~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 106 ALEQ-FYEEKLQFDLVLLDPPYAKQ-------EIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHH-HHHTTCCEEEEEECCCGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHH-HHhcCCCCCEEEECCCCCch-------hHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 1110 00001112466666554311 234455554 55899888777654443
No 159
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=23.75 E-value=99 Score=26.60 Aligned_cols=105 Identities=5% Similarity=0.008 Sum_probs=53.2
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEeeeecCCcccCCc
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYRGFVANSLADLDA 406 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~~v~~~sledl~~ 406 (592)
-+|+|+|.|.|. +...|+.+ |+ . +|||+. +...++...+++ +..++..+|.. .++.+..+
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~----~~~~~~~a~~~~----~~~~~~~~~~~---~d~~~~~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEK----DPEAVRLLKENV----RRTGLGARVVA---LPVEVFLP 102 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECC----CHHHHHHHHHHH----HHHTCCCEEEC---SCHHHHHH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeC----CHHHHHHHHHHH----HHcCCceEEEe---ccHHHHHH
Confidence 479999999995 44555554 32 2 999994 345555444443 33344444432 12222111
Q ss_pred ccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH---HhcCCcEEEEEecCCC
Q 043131 407 SMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV---KNIKPDIFTVAEQEAN 460 (592)
Q Consensus 407 ~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I---r~L~PkVvtlvEqEan 460 (592)
. +.-..+.-+.++.|..+. + . .+.++..+ +-|+|.-+++++....
T Consensus 103 ~-~~~~~~~~D~i~~~~~~~-~---~----~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 103 E-AKAQGERFTVAFMAPPYA-M---D----LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp H-HHHTTCCEEEEEECCCTT-S---C----TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred h-hhccCCceEEEEECCCCc-h---h----HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 0 100000114666665543 1 1 12344444 5689987777765443
No 160
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=23.36 E-value=1.3e+02 Score=31.84 Aligned_cols=111 Identities=18% Similarity=0.206 Sum_probs=70.2
Q ss_pred HHHHHHHHHhhccccCCCCchhhHHHHHHHHHHHHHhcCCCCC-CCCCCHHHHHHHHHHhhCChhHHHHHHHHHHH--Hh
Q 043131 243 TLAEAFVKQIRFLAVSQAGAMGKVATHFAEALARRIYGLYPQS-PIDHSFSELLEMQFYETCPYLKFAHFTANQAI--LE 319 (592)
Q Consensus 243 ~~A~~lL~~L~~las~~g~~~qRvA~yFaeAL~~Rl~~~~p~~-~~~~s~~~~l~~~fye~~P~lkFAhftANQAI--LE 319 (592)
.+++.|.++|+. ++++ .++.|+.+||-.--+|.|... +..+ .-|... --+++| -|+...|++.+ ++
T Consensus 6 ~L~~~i~~~I~~-----~G~i-~f~~fM~~aLy~P~~GYY~~~~~~G~-~GDF~T--apeis~--~FGe~la~~~~~~w~ 74 (387)
T 1zkd_A 6 ALATEIKRLIKA-----AGPM-PVWRYMELCLGHPEHGYYVTRDPLGR-EGDFTT--SPEISQ--MFGELLGLWSASVWK 74 (387)
T ss_dssp HHHHHHHHHHHH-----HCSE-EHHHHHHHHHHCTTTCTTTCC---------CCS--HHHHCH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cCCe-eHHHHHHHHhcCCCCcccCCCCCCCC-CCCeeC--CCchHH--HHHHHHHHHHHHHHH
Confidence 456677777752 3444 788999999987666666521 1100 011000 015676 57777777754 35
Q ss_pred hhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCC
Q 043131 320 AFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGP 364 (592)
Q Consensus 320 A~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~ 364 (592)
++.....++||++|-|.|.==..++++|...|.-...++++-|..
T Consensus 75 ~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~ 119 (387)
T 1zkd_A 75 AADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEI 119 (387)
T ss_dssp HTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECC
T ss_pred HcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEec
Confidence 565566899999999999876777788764433334578888874
No 161
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=23.36 E-value=1.1e+02 Score=30.05 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=36.7
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
+.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+. +.+.++...+++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEi----d~~~~~~~~~~~ 71 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEI----DRDLVAFLQKKY 71 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEEC----CHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEEC----CHHHHHHHHHHH
Confidence 347777765566689999999997 667777662 38999983 445555544444
No 162
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=22.97 E-value=3.8e+02 Score=26.53 Aligned_cols=137 Identities=9% Similarity=0.060 Sum_probs=67.7
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHH-cC-ceeEEeeeecCCcccC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAES-IH-VEFEYRGFVANSLADL 404 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~-lg-VpFeF~~v~~~sledl 404 (592)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+. +...++...+++...... ++ -.++|.. .+-.+-+
T Consensus 85 ~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDi----d~~vi~~ar~~~~~~~~~~~~~~rv~~~~--~D~~~~l 151 (294)
T 3adn_A 85 KHVLIIGGGDGA----MLREVTRH---KNVESITMVEI----DAGVVSFCRQYLPNHNAGSYDDPRFKLVI--DDGVNFV 151 (294)
T ss_dssp CEEEEESCTTCH----HHHHHHTC---TTCCEEEEECS----CTTHHHHHHHHCHHHHSSCTTCTTCCEEC--SCSCC--
T ss_pred CEEEEEeCChhH----HHHHHHhC---CCCCEEEEEEC----CHHHHHHHHHhhhhcccccccCCceEEEE--ChHHHHH
Confidence 479999999986 55666655 34579999984 334555555555444311 11 1223321 1111111
Q ss_pred CcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhh
Q 043131 405 DASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDS 483 (592)
Q Consensus 405 ~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDS 483 (592)
.. ..+.-+++++++.... ..+..-....|++.+ +.|+|.=++++.-++....+ +.+.+.+......|..
T Consensus 152 ~~-----~~~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~~ 221 (294)
T 3adn_A 152 NQ-----TSQTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFSD 221 (294)
T ss_dssp -C-----CCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCSE
T ss_pred hh-----cCCCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCCC
Confidence 10 1111257777654211 110000015566655 77899988887544322222 4455555556666776
Q ss_pred hhc
Q 043131 484 LEG 486 (592)
Q Consensus 484 Lea 486 (592)
...
T Consensus 222 v~~ 224 (294)
T 3adn_A 222 VGF 224 (294)
T ss_dssp EEE
T ss_pred eEE
Confidence 553
No 163
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=22.83 E-value=1.3e+02 Score=24.45 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=20.7
Q ss_pred CeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCceeEEe
Q 043131 355 PAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEFEYR 394 (592)
Q Consensus 355 P~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpFeF~ 394 (592)
-.+|||||. ...-.+....-.++|+.++|...|.
T Consensus 42 leiritgvp------eqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 42 LEIRITGVP------EQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp EEEEEESCC------HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEEecCh------HHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 469999995 2223344444445567778776665
No 164
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=22.54 E-value=60 Score=32.28 Aligned_cols=52 Identities=21% Similarity=0.126 Sum_probs=35.2
Q ss_pred HHHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 315 QAILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 315 QAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
+.|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+. +.+.++...+++
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEi----d~~~~~~l~~~~ 88 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEK----DLRLRPVLEETL 88 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEES----CGGGHHHHHHHT
T ss_pred HHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEEC----CHHHHHHHHHhc
Confidence 346677665666 99999999996 677777763 37999984 344454444443
No 165
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=22.47 E-value=2.3e+02 Score=29.61 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=54.7
Q ss_pred CeeEEEecccCCC----CchHHHHHHHhcCC----CCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHc---------
Q 043131 325 RRVHVIDFSMNQG----MQWPALMQALALRP----GGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESI--------- 387 (592)
Q Consensus 325 ~~VHIIDfgI~~G----~QWpsLiqaLA~Rp----gGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~l--------- 387 (592)
+.+.|.|||.+.| .-+-.+|+++..+. ..||.++|..-+.|..+.. .+=+.|..+-+.+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn----~lF~~L~~~~~~~~~~~~~~~~ 127 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFN----TLFQLLPPLVSNTCMEECLAAD 127 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHH----HHHHHSCCBCCCC--CCC---C
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchH----HHHhhhhhhhhhcchhhhcccc
Confidence 3699999999999 34445566555432 2368899999998864422 2222333322111
Q ss_pred CceeEEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCC
Q 043131 388 HVEFEYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQP 434 (592)
Q Consensus 388 gVpFeF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~ 434 (592)
+.+--|-.-+..++- . .+=| ++..=+|-|.+.||-|...|
T Consensus 128 ~~~~~f~~gvpgSFy---~---rlfP-~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 128 GNRSYFVAGVPGSFY---R---RLFP-ARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp CCBCSEEEEEESCTT---S---CCSC-TTCEEEEEEESCTTBCSSCC
T ss_pred CCCceEEEecChhhh---c---ccCC-CcceEEEEecceeeeeccCc
Confidence 001012222222321 1 1113 35677888899999987554
No 166
>1xwr_A Regulatory protein CII; all-alpha fold, DNA binding protein; 2.56A {Bacteriophage lambda} SCOP: a.35.1.9 PDB: 1zpq_A
Probab=22.10 E-value=21 Score=30.74 Aligned_cols=24 Identities=38% Similarity=0.609 Sum_probs=21.8
Q ss_pred chhhhhhhCCcccCCcHHHHHHHH
Q 043131 38 MDELLAVLGYNVRSSDMVEVAQKI 61 (592)
Q Consensus 38 ~d~~la~~gy~v~~~~m~~vaqkl 61 (592)
+..+|+++||||-..|+.+.++++
T Consensus 51 ~~~lLa~l~l~v~~~e~~~~~k~~ 74 (97)
T 1xwr_A 51 FSMLLAVLEWGVVDDDMARLARQV 74 (97)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHHHH
Confidence 689999999999999999988876
No 167
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=22.10 E-value=1.6e+02 Score=27.45 Aligned_cols=54 Identities=11% Similarity=0.018 Sum_probs=32.1
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
|++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++++|+. +...++...+++
T Consensus 85 i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~----~~~~~~~a~~~~ 138 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEI----REDFAKLAWENI 138 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECS----CHHHHHHHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEec----CHHHHHHHHHHH
Confidence 4444444445579999999986433333333 13468999984 345555544444
No 168
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=21.84 E-value=84 Score=28.34 Aligned_cols=96 Identities=13% Similarity=0.123 Sum_probs=52.2
Q ss_pred eEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEeeeecCCcccCC
Q 043131 327 VHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRGFVANSLADLD 405 (592)
Q Consensus 327 VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~v~~~sledl~ 405 (592)
-+|+|+|.|.|.--..|.+.+ |..++|||+. +...++...+ .++..+++ .+|.. .++.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~----s~~~~~~a~~----~~~~~~~~~v~~~~---~d~~~~~ 128 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDS----LGKRVRFLRQ----VQHELKLENIEPVQ---SRVEEFP 128 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEES----CHHHHHHHHH----HHHHTTCSSEEEEE---CCTTTSC
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeC----CHHHHHHHHH----HHHHcCCCCeEEEe---cchhhCC
Confidence 389999999998555544432 3358999984 3344443333 33445654 55543 2333322
Q ss_pred cccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 043131 406 ASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTVAE 456 (592)
Q Consensus 406 ~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtlvE 456 (592)
+ .+.-+.++.|. + .....+|..+ +.|+|.-.++++
T Consensus 129 ~------~~~~D~i~~~~---~-------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 129 S------EPPFDGVISRA---F-------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp C------CSCEEEEECSC---S-------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred c------cCCcCEEEEec---c-------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 1 01113444332 1 2245666666 557898777765
No 169
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=21.13 E-value=81 Score=30.26 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhcCCcEEEEEecCCCCCCCchHHHHHHHHHHHHHHhhhhhcc
Q 043131 436 AIDKVLSVVKNIKPDIFTVAEQEANHNGPVFLDRFTESLHYYSTMFDSLEGS 487 (592)
Q Consensus 436 ~~~~~L~~Ir~L~PkVvtlvEqEanhNsp~Fl~RF~EAL~yYsalFDSLea~ 487 (592)
..+.+++.+++.+.+..+.+|.+.........+-+.+++.|...+++.|..|
T Consensus 239 d~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 239 GMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp CHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999999998888998875432246888999999999999887654
No 170
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=20.85 E-value=88 Score=29.07 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=54.7
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce-eEEeeeecCCccc
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE-FEYRGFVANSLAD 403 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp-FeF~~v~~~sled 403 (592)
..-.|+|+|.|.|. +...||.+. |..++|||+. +...++...++ ++..|++ ++|.. .+..+
T Consensus 38 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~giD~----s~~~l~~a~~~----~~~~~~~nv~~~~---~d~~~ 99 (213)
T 2fca_A 38 DNPIHIEVGTGKGQ----FISGMAKQN---PDINYIGIEL----FKSVIVTAVQK----VKDSEAQNVKLLN---IDADT 99 (213)
T ss_dssp CCCEEEEECCTTSH----HHHHHHHHC---TTSEEEEECS----CHHHHHHHHHH----HHHSCCSSEEEEC---CCGGG
T ss_pred CCceEEEEecCCCH----HHHHHHHHC---CCCCEEEEEe----chHHHHHHHHH----HHHcCCCCEEEEe---CCHHH
Confidence 34469999999996 344455442 3468999994 34555544444 3344553 44432 12222
Q ss_pred CCcccccccCCCCceEEEEeccch----hcccCCCChHHHHHHHH-HhcCCcEEEEEec
Q 043131 404 LDASMLEIKPSEVDSVAVNSVFEL----HKLLAQPGAIDKVLSVV-KNIKPDIFTVAEQ 457 (592)
Q Consensus 404 l~~~~L~lr~~~~EaLaVN~~f~L----H~Ll~~~~~~~~~L~~I-r~L~PkVvtlvEq 457 (592)
+.. . +..+.=+.+.+|+.... |+- .+ -....+|+.+ +-|+|.-.+++.-
T Consensus 100 l~~-~--~~~~~~d~v~~~~~~p~~~~~~~~-~r-l~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 100 LTD-V--FEPGEVKRVYLNFSDPWPKKRHEK-RR-LTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHH-H--CCTTSCCEEEEESCCCCCSGGGGG-GS-TTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred HHh-h--cCcCCcCEEEEECCCCCcCccccc-cc-cCcHHHHHHHHHHcCCCCEEEEEe
Confidence 210 1 11111135555542110 110 00 0125667666 5589987666643
No 171
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=20.65 E-value=1.3e+02 Score=31.48 Aligned_cols=110 Identities=18% Similarity=0.248 Sum_probs=54.9
Q ss_pred HHHHhh---hCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCcee
Q 043131 315 QAILEA---FDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVEF 391 (592)
Q Consensus 315 QAILEA---~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVpF 391 (592)
+||+.+ ++|+ +|+|+|.|.| +-++ +|.|.|. -|++||+.. . .+ +..+ +.++.-|+.=
T Consensus 73 ~Ai~~~~~~~~~k---~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s--~---~~-~~a~---~~~~~n~~~~ 132 (376)
T 4hc4_A 73 LGILRNWAALRGK---TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEAS--A---IW-QQAR---EVVRFNGLED 132 (376)
T ss_dssp HHHHTTHHHHTTC---EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECS--T---TH-HHHH---HHHHHTTCTT
T ss_pred HHHHhCHHhcCCC---EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeCh--H---HH-HHHH---HHHHHcCCCc
Confidence 456543 4555 5889888887 3344 4445443 279999842 1 12 2222 3344445432
Q ss_pred EEeeeecCCcccCCcccccccCCCCceEEEEeccchhcccCCCChHHHHHHHH-HhcCCcEEEE
Q 043131 392 EYRGFVANSLADLDASMLEIKPSEVDSVAVNSVFELHKLLAQPGAIDKVLSVV-KNIKPDIFTV 454 (592)
Q Consensus 392 eF~~v~~~sledl~~~~L~lr~~~~EaLaVN~~f~LH~Ll~~~~~~~~~L~~I-r~L~PkVvtl 454 (592)
....+ ....++++. |..-++++-+++ -+.|+. .+.++.+|... |-|+|.-+++
T Consensus 133 ~i~~i-~~~~~~~~l------pe~~DvivsE~~--~~~l~~-e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 133 RVHVL-PGPVETVEL------PEQVDAIVSEWM--GYGLLH-ESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TEEEE-ESCTTTCCC------SSCEEEEECCCC--BTTBTT-TCSHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEE-eeeeeeecC------CccccEEEeecc--cccccc-cchhhhHHHHHHhhCCCCceEC
Confidence 22222 234455432 111123332332 233333 35678888877 6678886665
No 172
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=20.47 E-value=1.8e+02 Score=27.58 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=33.4
Q ss_pred HHHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHH
Q 043131 316 AILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQ 382 (592)
Q Consensus 316 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~ 382 (592)
.|++.+.-...-.|+|+|.|.|.--..|.+.+ .|..++++|+. +...++...+++.+
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~----~~~~~~~a~~~~~~ 146 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAV------GPAGQVISYEQ----RADHAEHARRNVSG 146 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECS----CHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHh------CCCCEEEEEeC----CHHHHHHHHHHHHH
Confidence 34555543444579999999886333333333 13358999984 44556555555443
No 173
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=20.44 E-value=2.2e+02 Score=26.94 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=55.6
Q ss_pred CeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHHHHHHHcCce--eEEeeeecCCcc
Q 043131 325 RRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLAQLAESIHVE--FEYRGFVANSLA 402 (592)
Q Consensus 325 ~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~~fA~~lgVp--FeF~~v~~~sle 402 (592)
..-.|+|+|.|.|. +...|+.+.. . +||||+. +...++...+++ +..++. ++|.. .++.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi----~~~~~~~a~~n~----~~~~~~~~v~~~~---~D~~ 109 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEI----QERLADMAKRSV----AYNQLEDQIEIIE---YDLK 109 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECC----SHHHHHHHHHHH----HHTTCTTTEEEEC---SCGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEEC----CHHHHHHHHHHH----HHCCCcccEEEEE---CcHH
Confidence 34579999999995 5556777632 2 9999994 344554444433 344554 44432 2333
Q ss_pred cCCcccccccCCCCceEEEEeccchh---cccCC-----------CChHHHHHHHH-HhcCCcEEEEE
Q 043131 403 DLDASMLEIKPSEVDSVAVNSVFELH---KLLAQ-----------PGAIDKVLSVV-KNIKPDIFTVA 455 (592)
Q Consensus 403 dl~~~~L~lr~~~~EaLaVN~~f~LH---~Ll~~-----------~~~~~~~L~~I-r~L~PkVvtlv 455 (592)
++.. .+..+.-+.++.|-.+.-. .+... ....+.+++.+ +-|+|.-.+++
T Consensus 110 ~~~~---~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 110 KITD---LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GGGG---TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred Hhhh---hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 3221 1111122577777554322 12110 11245566655 55788766665
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=20.10 E-value=1.7e+02 Score=26.81 Aligned_cols=60 Identities=12% Similarity=0.018 Sum_probs=33.9
Q ss_pred HHHhhhC--CCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHHH
Q 043131 316 AILEAFD--GKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKLA 381 (592)
Q Consensus 316 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL~ 381 (592)
.+++.+. -...-+|+|+|.|.|..-..|.+.+..+ ..|..++|||+. +...++...+++.
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~----~~~~~~~a~~~~~ 130 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLER----VKDLVNFSLENIK 130 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEES----CHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeC----CHHHHHHHHHHHH
Confidence 4455553 2334589999999986444343332111 124569999984 3455555555443
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=20.05 E-value=4.9e+02 Score=23.75 Aligned_cols=51 Identities=14% Similarity=0.162 Sum_probs=29.7
Q ss_pred HHhhhCCCCeeEEEecccCCCCchHHHHHHHhcCCCCCCeeEEeecCCCCCCChHHHHHHHHHH
Q 043131 317 ILEAFDGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNTDQLQQVGWKL 380 (592)
Q Consensus 317 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~RpgGPP~LRITgIg~p~~~~~~~L~etG~rL 380 (592)
|++.+.-...-+|+|+|.|.|. +...|+.+ + .++++|+. +...++...+++
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~-~----~~v~~vD~----~~~~~~~a~~~~ 133 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGA----LLAVLSEV-A----GEVWTFEA----VEEFYKTAQKNL 133 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSH----HHHHHHHH-S----SEEEEECS----CHHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEeCCCccH----HHHHHHHh-C----CEEEEEec----CHHHHHHHHHHH
Confidence 4444433334479999999876 33344444 2 48999984 345555544443
Done!