BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043135
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1
Length = 653
Score = 601 bits (1549), Expect = e-171, Method: Compositional matrix adjust.
Identities = 307/498 (61%), Positives = 362/498 (72%), Gaps = 60/498 (12%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G++IYDA LNQTN+ DN+N FY+IQ+LESD GG MVY+RWGRVGV+GQD + GP +D
Sbjct: 186 GDEIYDATLNQTNVGDNNNKFYIIQVLESDAGGSFMVYNRWGRVGVRGQDKLHGPSPTRD 245
Query: 61 TAINEFEQKWQ------------FTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
AI EFE K+ F Y K YTWLE DY +TE+ + EK +I Q
Sbjct: 246 QAIYEFEGKFHNKTNNHWSDRKNFKCYAKKYTWLEMDYG--ETEKEI--EK--GSITDQI 299
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+ TKLE R+A+F+SLICNISMMKQ M+EIGYNA KLPLG L K+TILKGY VLKRI+DVI
Sbjct: 300 KETKLETRIAQFISLICNISMMKQRMVEIGYNAEKLPLGKLRKATILKGYHVLKRISDVI 359
Query: 169 HLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLE 228
DRR LEQL+GEFYTVIPHDFGF+KM + +IDTPQKLK KLEMV+ALGEIE+AT LLE
Sbjct: 360 SKADRRHLEQLTGEFYTVIPHDFGFRKMREFIIDTPQKLKAKLEMVEALGEIEIATKLLE 419
Query: 229 DDTQIQADPLYAYYQRLHCQLTPL-AGADLASHHSKYFQFSKIGLILPVSIIILEQTFSI 287
DD+ Q DPLYA Y++LHC TPL A +D S I
Sbjct: 420 DDSSDQDDPLYARYKQLHCDFTPLEADSDEYS--------------------------MI 453
Query: 288 AKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILS 347
YL NTH KTHS Y+VDIVQIF+V R GETERF+K ++++NRMLLWHGSRL+NW GILS
Sbjct: 454 KSYLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILS 513
Query: 348 QGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLS 407
QGLRIAPPEAP TGYMFGKGVYFADMFS SA+YC AS A +GVLLLCEVALGDM+ELL+
Sbjct: 514 QGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLN 573
Query: 408 ANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIVY 452
A+ DA+ LP GKL +KGVGQTAP+ +E++ +DG G LLYNEYIVY
Sbjct: 574 ADYDANNLPKGKLRSKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVY 633
Query: 453 SVDQIRMRYVVQVNFKYK 470
+VDQIRMRYV+ VNF +K
Sbjct: 634 NVDQIRMRYVLHVNFNFK 651
>sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2
PE=2 SV=1
Length = 637
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/497 (59%), Positives = 357/497 (71%), Gaps = 52/497 (10%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G+D+YDA LNQTN+ DN+N F+V+Q+LESD MVY RWGRVGVKGQ + GPY+ D
Sbjct: 165 GDDVYDAILNQTNVRDNNNKFFVLQVLESDSKKTYMVYTRWGRVGVKGQSKLDGPYDSWD 224
Query: 61 TAINEFEQKW------------QFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
AI F K+ +F +PK YTWLE DY + + V ++ P S+ ++P
Sbjct: 225 RAIEIFTNKFNDKTKNYWSDRKEFIPHPKSYTWLEMDYGKEENDSPVNNDIPSSSSEVKP 284
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+ +KL+ RVAKF+SLICN+SMM Q MMEIGYNANKLPLG +SKSTI KGY+VLKRI++VI
Sbjct: 285 EQSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGKISKSTISKGYEVLKRISEVI 344
Query: 169 HLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLE 228
DR +LE+LSGEFYTVIPHDFGF+KM VIDTPQKLK K+EMV+ALGEIE+AT LL
Sbjct: 345 DRYDRTRLEELSGEFYTVIPHDFGFKKMSQFVIDTPQKLKQKIEMVEALGEIELATKLLS 404
Query: 229 DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSIA 288
D +Q DPLY +YQ+L+C LTP+ + S+ F +A
Sbjct: 405 VDPGLQDDPLYYHYQQLNCGLTPVG------NDSEEFSM-------------------VA 439
Query: 289 KYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILSQ 348
Y+ NTHAKTHS Y+V+I Q+FR R E +RF++ S+SKNRMLLWHGSRLTNW GILSQ
Sbjct: 440 NYMENTHAKTHSGYTVEIAQLFRASRAVEADRFQQFSSSKNRMLLWHGSRLTNWAGILSQ 499
Query: 349 GLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLSA 408
GLRIAPPEAP TGYMFGKGVYFADMFS SA+YC A+ A GVLLLCEVALGDM+ELL +
Sbjct: 500 GLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGDMNELLYS 559
Query: 409 NSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIVYS 453
+ +AD LP GKL TKGVG+TAP+P EA+TLEDG G LLYNEYIVY+
Sbjct: 560 DYNADNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYN 619
Query: 454 VDQIRMRYVVQVNFKYK 470
V+QI+MRYV+QV F YK
Sbjct: 620 VEQIKMRYVIQVKFNYK 636
>sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica
GN=PARP2-A PE=3 SV=2
Length = 660
Score = 587 bits (1513), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/497 (59%), Positives = 353/497 (71%), Gaps = 56/497 (11%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G++IYDA +NQTN+ DN+N FY+IQ LESD GG MVY+RWGRVG +GQD + GP++ ++
Sbjct: 191 GDEIYDATMNQTNVGDNNNKFYIIQALESDAGGSFMVYNRWGRVGARGQDKLHGPFSSRE 250
Query: 61 TAINEFEQKWQ------------FTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
AI EFE K+ F Y + YTWLE DY E + K S Q
Sbjct: 251 QAIYEFEGKFHGKTNNHWSDRKSFECYARKYTWLEMDYGEADRETN----KKVSPSTDQI 306
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+ TKLE R+A F+SLICNISMMKQ M+EIGYN++KLPLG LSKSTI KGYDVLKRI++VI
Sbjct: 307 KETKLETRIASFISLICNISMMKQQMVEIGYNSDKLPLGKLSKSTIFKGYDVLKRISNVI 366
Query: 169 HLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLE 228
DRR+LEQL+GEFYTVIPHDFGF+KM + +IDTPQKLK KLEMV+ALGEIE+AT LLE
Sbjct: 367 SRADRRQLEQLTGEFYTVIPHDFGFKKMREFIIDTPQKLKAKLEMVEALGEIEIATKLLE 426
Query: 229 DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSIA 288
DD+ Q DPLYA Y++L C TPL + E+ I
Sbjct: 427 DDSTDQDDPLYARYKQLSCDFTPLE-------------------------VGSEEYSMIK 461
Query: 289 KYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILSQ 348
YL NTH KTH+SY+VD+VQIF+V R GE ERF+K + + NRMLLWHGSRLTNW GILSQ
Sbjct: 462 TYLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATAGNRMLLWHGSRLTNWAGILSQ 521
Query: 349 GLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLSA 408
GLRIAPPEAP TGYMFGKGVYFADMFS SA+YC AS A +GVLLLCEVALG+M+ELL+A
Sbjct: 522 GLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGEMNELLNA 581
Query: 409 NSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIVYS 453
+ DA+ LP GKL TKGVGQT P+ E++ +DG G LLYNE+IVY+
Sbjct: 582 DYDANNLPKGKLSTKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYN 641
Query: 454 VDQIRMRYVVQVNFKYK 470
VDQIRMRYV+ V+F +K
Sbjct: 642 VDQIRMRYVLHVSFNFK 658
>sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica
GN=PARP2-B PE=3 SV=2
Length = 605
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/491 (55%), Positives = 330/491 (67%), Gaps = 69/491 (14%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G++IYDA +NQTN+ N+N FY+IQ LESD GG MVY RWGRVG +
Sbjct: 160 GDEIYDATMNQTNVGGNNNKFYIIQALESDAGGNFMVYSRWGRVGTR------------- 206
Query: 61 TAINEFEQKWQFTSYPKCY----TWLERDYSANQTEESVVHEKPDSTINIQPQNTKLEPR 116
+ W + CY TWLE DY E + K S+I Q + TKLE R
Sbjct: 207 ------DIHWSYRKGSHCYAHKYTWLEMDYGEADKETN----KKTSSITNQLEETKLETR 256
Query: 117 VAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVIHLPD--RR 174
A F+SLIC+ISMMKQ M+EIGYNA+KLPLG LSKSTILKGYDVLKRI++VI D R
Sbjct: 257 TASFISLICDISMMKQQMVEIGYNADKLPLGKLSKSTILKGYDVLKRISNVISGADTDRT 316
Query: 175 KLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLEDDTQIQ 234
+LEQL+GEFY+VIPHDFGF+KM + +IDTPQKLK KLEMV+AL EIE+A LLEDD+ Q
Sbjct: 317 QLEQLTGEFYSVIPHDFGFKKMSEFIIDTPQKLKAKLEMVEALSEIEIAIKLLEDDSSDQ 376
Query: 235 ADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSIAKYLLNT 294
PLYA Y++ C TPL + E+ I YL NT
Sbjct: 377 DHPLYARYKQFCCDFTPLE-------------------------VDSEEYSMIKTYLTNT 411
Query: 295 HAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAP 354
H KTH+ Y+VDIVQIF+V R GE ERF+K +++ NRMLLWHGSRLTNW GILSQGLRIAP
Sbjct: 412 HGKTHTGYTVDIVQIFKVSRLGEMERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAP 471
Query: 355 PEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLSANSDADK 414
PEAP +G+MFGKGVYFADMFS SA+YC AS A +GV+LLCEVALG+M+ELL + AD
Sbjct: 472 PEAPISGFMFGKGVYFADMFSKSANYCCASEACKSGVMLLCEVALGEMNELLYGDFGADN 531
Query: 415 LPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIVYSVDQIRM 459
LP+GKL TKGVGQT P+ E++ +DG G L+YNEYIVY+VDQIRM
Sbjct: 532 LPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSRRGSLMYNEYIVYNVDQIRM 591
Query: 460 RYVVQVNFKYK 470
RY++ VNF +K
Sbjct: 592 RYILNVNFNFK 602
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/499 (41%), Positives = 289/499 (57%), Gaps = 64/499 (12%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIF---GPYN 57
G+D+YD LNQTN++ N+N +Y+IQLLE D V+ RWGRVG GQ ++ G N
Sbjct: 91 GDDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKTGQHSLVTCSGDLN 150
Query: 58 ---------LQDTAINEFEQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
D N +E + F P Y L+ DY+A+ +ES E+ ++P
Sbjct: 151 KAKEIFQKKFLDKTKNNWEDRENFEKVPGKYDMLQMDYAASTQDESKTKEEE----TLKP 206
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+ ++L+ RV + L LICN+ M+++M+E+ Y+ + PLG L+ + I GY LK+I D I
Sbjct: 207 E-SQLDLRVQELLKLICNVQTMEEMMIEMKYDTKRAPLGKLTVAQIKAGYQSLKKIEDCI 265
Query: 169 HLPDR-RKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLL 227
R L + EFYT IPHDFG VI T ++L K+++++ALG+IE+A L+
Sbjct: 266 RAGQHGRALVEACNEFYTRIPHDFGLSI--PPVIRTEKELSDKVKLLEALGDIEIALKLV 323
Query: 228 EDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSI 287
+ + Q PL +Y+ LHC L PL H S F+ I
Sbjct: 324 KSERQGLEHPLDQHYRNLHCALRPL------DHESNEFKV-------------------I 358
Query: 288 AKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILS 347
++YL +THA TH Y++ ++ +F VE+EGE E F++ + NRMLLWHGSRL+NW GILS
Sbjct: 359 SQYLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAFRE--DLPNRMLLWHGSRLSNWVGILS 416
Query: 348 QGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLS 407
GLR+APPEAP TGYMFGKG+YFADM S SA+YC AS G+LLL EVALG +ELL
Sbjct: 417 HGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLE 476
Query: 408 ANSDADKLPDGKLITKGVGQTAPDPLEAETLE-----------------DGGHLLYNEYI 450
AN A L GK TKG+G+ AP P TL +G L YNE+I
Sbjct: 477 ANPKAQGLLRGKHSTKGMGKMAPSPAHFITLNGSTVPLGPASDTGILNPEGYTLNYNEFI 536
Query: 451 VYSVDQIRMRYVVQVNFKY 469
VYS +Q+RMRY++++ F +
Sbjct: 537 VYSPNQVRMRYLLKIQFNF 555
>sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2
Length = 583
Score = 358 bits (918), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 210/499 (42%), Positives = 290/499 (58%), Gaps = 60/499 (12%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIF---GPYN 57
GND+YD LNQTN++ N+N +Y+IQLLE D V+ RWGRVG GQ ++ G N
Sbjct: 111 GNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLN 170
Query: 58 ---------LQDTAINEFEQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
D N +E + +F P Y L+ DY+ N +E ++ ++P
Sbjct: 171 KAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKP 230
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+ ++L+ RV + + LICN+ M+++MME+ YN K PLG L+ + I GY LK+I D I
Sbjct: 231 E-SQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCI 289
Query: 169 HLPDR-RKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLL 227
R L + EFYT IPHDFG + +I T ++L K+++++ALG+IE+A L+
Sbjct: 290 RAGQHGRALMEACNEFYTRIPHDFGLRT--PPLIRTQKELSEKIQLLEALGDIEIAIKLV 347
Query: 228 EDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSI 287
+ + Q PL +Y+ LHC L PL H S F+ I
Sbjct: 348 KTELQSPEHPLDQHYRNLHCALRPL------DHESYEFKV-------------------I 382
Query: 288 AKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILS 347
++YL +THA THS Y++ ++ +F VE++GE E F++ + NRMLLWHGSR++NW GILS
Sbjct: 383 SQYLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFRE--DLHNRMLLWHGSRMSNWVGILS 440
Query: 348 QGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLS 407
GLRIAPPEAP TGYMFGKG+YFADM S SA+YC AS G+LLL EVALG +ELL
Sbjct: 441 HGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLE 500
Query: 408 ANSDADKLPDGKLITKGVGQTAPDPLEAETLE-----------------DGGHLLYNEYI 450
AN A+ L GK TKG+G+ AP TL DG L YNEYI
Sbjct: 501 ANPKAEGLLQGKHSTKGLGKMAPSSAHFVTLNGSTVPLGPASDTGILNPDGYTLNYNEYI 560
Query: 451 VYSVDQIRMRYVVQVNFKY 469
VY+ +Q+RMRY+++V F +
Sbjct: 561 VYNPNQVRMRYLLKVQFNF 579
>sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis
GN=parp1 PE=2 SV=1
Length = 998
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/503 (37%), Positives = 274/503 (54%), Gaps = 74/503 (14%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G I+ A L +I +N +Y +QL+E D V+ WGRVG T+ G L++
Sbjct: 532 GGKIFSATLGLVDITRGTNSYYKLQLIEHDRDSRYWVFRSWGRVG-----TVIGSKKLEE 586
Query: 61 T-----AINEFEQKWQ-----------FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
AI F +Q FT YPK + LE DY EE VV + +
Sbjct: 587 MSSKEDAIEHFLNLYQDKTGNAWHSPNFTKYPKKFYPLEIDYG---QEEDVVKK-----L 638
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
++ +KL V + + LI ++ MK+ M+E + K+PLG LSK I Y +L +
Sbjct: 639 SVGAGTKSKLAKPVQELIKLIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSQ 698
Query: 164 IADVIH--LPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIE 221
+ + L + R L+ LS +FYT+IPHDFG +K +++ + ++ K++M+ L +IE
Sbjct: 699 VQQAVSESLSEARLLD-LSNQFYTLIPHDFGMKK--PPLLNNLEYIQAKVQMLDNLLDIE 755
Query: 222 VATNLLEDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIIL 281
VA +LL GAD ++ KI + V
Sbjct: 756 VAYSLLR------------------------GGADDGEKDPIDVKYEKIKTDIKVVAKDS 791
Query: 282 EQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTN 341
E++ I Y+ NTHA TH++Y +++++IF+++REGE +R+K NR LLWHGSR TN
Sbjct: 792 EESRIICDYVKNTHADTHNAYDLEVLEIFKIDREGEYQRYKPFKQLHNRQLLWHGSRTTN 851
Query: 342 WTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGD 401
+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+A P + G++LL EVALG+
Sbjct: 852 FAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHAMPGSPIGLILLGEVALGN 911
Query: 402 MSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLLYN 447
M EL +A S KLP GK KG+G+TAPDP L+ LLYN
Sbjct: 912 MHELKAA-SQITKLPKGKHSVKGLGRTAPDPSATVQLDGVDVPLGKGTSANISDTSLLYN 970
Query: 448 EYIVYSVDQIRMRYVVQVNFKYK 470
EYIVY + Q+ ++Y++++ F YK
Sbjct: 971 EYIVYDIAQVNLKYLLKLKFNYK 993
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1
SV=4
Length = 1014
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 275/505 (54%), Gaps = 78/505 (15%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G ++ A L +I +N +Y +QLLESD ++ WGRVG T+ G L+
Sbjct: 549 GGKVFSATLGLVDIVKGTNSYYKLQLLESDKESRYWIFRSWGRVG-----TVIGSNKLEQ 603
Query: 61 TAINE---------FEQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
E +E+K W FT YPK + LE DY Q EE+V +
Sbjct: 604 MPSKEDAVEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDY--GQDEEAV------KKL 655
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
++P +KL V + + +I ++ MK+ ++E + K+PLG LS+ I Y +L
Sbjct: 656 AVKPGTKSKLPKPVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSE 715
Query: 164 IADVIHL-PDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEV 222
+ + ++ LS FYT+IPHDFG +K +++ ++ K+EM+ L +IEV
Sbjct: 716 VQQAVSQGSSESQILDLSNRFYTLIPHDFGMKK--PPLLNNTDSVQAKVEMLDNLLDIEV 773
Query: 223 ATNLLE---DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSII 279
A +LL DD+ DP+ Y++L T + D S
Sbjct: 774 AYSLLRGGSDDSS--KDPIDVNYEKLK---TDIKVVDRDS-------------------- 808
Query: 280 ILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRL 339
E+ I KY+ NTHA TH++Y ++++ IF++EREGE++R+K NR LLWHGSR
Sbjct: 809 --EEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRT 866
Query: 340 TNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVAL 399
TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S G++LL EVAL
Sbjct: 867 TNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVAL 926
Query: 400 GDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLL 445
G+M EL A S KLP GK KG+G+TAPDP + TL+ + LL
Sbjct: 927 GNMYELKHA-SHISKLPKGKHSVKGLGKTAPDPSASITLDGVEVPLGTGIPSGVNDTCLL 985
Query: 446 YNEYIVYSVDQIRMRYVVQVNFKYK 470
YNEYIVY + Q+ ++Y++++ F +K
Sbjct: 986 YNEYIVYDIAQVNLKYLLKLKFNFK 1010
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2
SV=3
Length = 1013
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 273/505 (54%), Gaps = 78/505 (15%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G ++ A L +I +N +Y +QLLE D ++ WGRVG T+ G L+
Sbjct: 548 GGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVG-----TVIGSNKLEQ 602
Query: 61 TAINE---------FEQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
E +E+K W FT YPK + LE DY Q EE+V +
Sbjct: 603 MPSKEDAVEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDY--GQDEEAV------KKL 654
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
++P +KL V + + +I ++ MK+ ++E + K+PLG LSK I Y +L
Sbjct: 655 TVKPGTKSKLPKAVQELVGMIFDVESMKKALVEYEIDLQKMPLGKLSKRQIQAAYSILSE 714
Query: 164 IADVI-HLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEV 222
+ + ++ LS FYT+IPHDFG +K +++ ++ K+EM+ L +IEV
Sbjct: 715 VQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKK--PPLLNNADSVQAKVEMLDNLLDIEV 772
Query: 223 ATNLLE---DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSII 279
A +LL DD+ DP+ Y++L T + D S
Sbjct: 773 AYSLLRGGSDDSS--KDPIDVNYEKLK---TDIKVVDRDS-------------------- 807
Query: 280 ILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRL 339
E+ I KY+ NTHA TH++Y ++++ IF++EREGE++R+K NR LLWHGSR
Sbjct: 808 --EEAEVIRKYVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPFKQLHNRRLLWHGSRT 865
Query: 340 TNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVAL 399
TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S G++LL EVAL
Sbjct: 866 TNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVAL 925
Query: 400 GDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLL 445
G+M EL A S KLP GK KG+G+T PDP + TLE + LL
Sbjct: 926 GNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITLEGVEVPLGTGIPSGVNDTCLL 984
Query: 446 YNEYIVYSVDQIRMRYVVQVNFKYK 470
YNEYIVY + Q+ ++Y++++ F +K
Sbjct: 985 YNEYIVYDIAQVNLKYLLKLKFNFK 1009
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3
Length = 1013
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 276/505 (54%), Gaps = 78/505 (15%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQ- 59
G ++ A L +I +N +Y +QLLE D ++ WGR+G T+ G L+
Sbjct: 548 GGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRLG-----TVIGSNKLEQ 602
Query: 60 ----DTAINEF----EQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
+ A+ +F E+K W FT YPK + LE DY Q EE+V +
Sbjct: 603 MPSKEEAVEQFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDY--GQDEEAV------KKL 654
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
++P +KL V + + +I ++ MK+ ++E + K+PLG LS+ I Y +L
Sbjct: 655 TVKPGTKSKLPKPVQELVGMIFDVDSMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSE 714
Query: 164 IAD-VIHLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEV 222
+ V ++ LS FYT+IPHDFG +K +++ ++ K+EM+ L +IEV
Sbjct: 715 VQQPVSQGSSESQILDLSNRFYTLIPHDFGMKK--PPLLNNADSVQAKVEMLDNLLDIEV 772
Query: 223 ATNLLE---DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSII 279
A +LL DD+ DP+ Y++L T + D S
Sbjct: 773 AYSLLRGGSDDSS--KDPIDVNYEKLK---TDIKVVDRDS-------------------- 807
Query: 280 ILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRL 339
E+ I KY+ NTHA TH++Y ++++ IF++EREGE++R+K NR LLWHGSR
Sbjct: 808 --EEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRT 865
Query: 340 TNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVAL 399
TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S G+++L EVAL
Sbjct: 866 TNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVAL 925
Query: 400 GDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLL 445
G+M EL A S KLP GK KG+G+T PDP + TLE + LL
Sbjct: 926 GNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITLEGVEVPLGTGIPSGVNDTALL 984
Query: 446 YNEYIVYSVDQIRMRYVVQVNFKYK 470
YNEYIVY + Q+ ++Y++++ F +K
Sbjct: 985 YNEYIVYDIAQVNLKYLLKLKFNFK 1009
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4
Length = 1014
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 271/505 (53%), Gaps = 78/505 (15%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQ- 59
G ++ A L +I +N +Y +QLLE D ++ WGRVG T+ G L+
Sbjct: 549 GGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVG-----TVIGSNKLEQ 603
Query: 60 ----DTAINEF----EQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
+ AI F E+K W FT YPK + LE DY Q EE+V +
Sbjct: 604 MPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDY--GQDEEAV------KKL 655
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
+ P +KL V + +I ++ MK+ M+E + K+PLG LSK I Y +L
Sbjct: 656 TVNPGTKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSE 715
Query: 164 IADVI-HLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEV 222
+ + ++ LS FYT+IPHDFG +K +++ ++ K+EM+ L +IEV
Sbjct: 716 VQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKK--PPLLNNADSVQAKVEMLDNLLDIEV 773
Query: 223 ATNLLE---DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSII 279
A +LL DD+ DP+ Y++L T + D S
Sbjct: 774 AYSLLRGGSDDSS--KDPIDVNYEKLK---TDIKVVDRDS-------------------- 808
Query: 280 ILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRL 339
E+ I KY+ NTHA TH++Y ++++ IF++EREGE +R+K NR LLWHGSR
Sbjct: 809 --EEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRT 866
Query: 340 TNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVAL 399
TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S G++LL EVAL
Sbjct: 867 TNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVAL 926
Query: 400 GDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLL 445
G+M EL A S KLP GK KG+G+T PDP +L+ + LL
Sbjct: 927 GNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLL 985
Query: 446 YNEYIVYSVDQIRMRYVVQVNFKYK 470
YNEYIVY + Q+ ++Y++++ F +K
Sbjct: 986 YNEYIVYDIAQVNLKYLLKLKFNFK 1010
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2
Length = 1016
Score = 298 bits (762), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 272/506 (53%), Gaps = 80/506 (15%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQ- 59
G ++ A L +I +N +Y +QLLE D ++ WGRVG T+ G L+
Sbjct: 551 GGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVG-----TVIGSNKLEQ 605
Query: 60 ----DTAINEF----EQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
+ AI F E+K W FT +PK + LE DY Q EE+V +
Sbjct: 606 MPSKEDAIEHFMKLYEEKTGNAWHSKNFTKHPKKFYPLEIDY--GQDEEAV------KKL 657
Query: 105 NIQP-QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
+ P +KL V + +I ++ MK+ M+E + K+PLG LSK I Y +L
Sbjct: 658 TVNPGTKSKLPKPVQNLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSE 717
Query: 164 IADVIHL--PDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIE 221
+ + D L+ LS FYT+IPHDFG +K +++ ++ K+EM+ L +IE
Sbjct: 718 VQQALSQGSSDSHILD-LSNRFYTLIPHDFGMKK--PPLLNNANSVQAKVEMLDNLLDIE 774
Query: 222 VATNLLE---DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSI 278
VA +LL DD+ DP+ Y++L T + D S
Sbjct: 775 VAYSLLRGGSDDSS--KDPIDVNYEKLK---TDIKVVDKDS------------------- 810
Query: 279 IILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSR 338
E+ I KY+ NTHA TH++Y +++V IF++EREGE++R+K NR LLWHGSR
Sbjct: 811 ---EEAEIIRKYVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPFKQLHNRRLLWHGSR 867
Query: 339 LTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVA 398
TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S G++LL E A
Sbjct: 868 TTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAA 927
Query: 399 LGDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHL 444
LG+M EL A KLP GK KG+G+T PDP + T++ + L
Sbjct: 928 LGNMYELKHARH-ISKLPKGKHSVKGLGKTTPDPSASITVDGVEVPLGTGISSGVNDTCL 986
Query: 445 LYNEYIVYSVDQIRMRYVVQVNFKYK 470
LYNEYIVY + Q+ ++Y++++ F +K
Sbjct: 987 LYNEYIVYDIAQVHLKYLLKLKFNFK 1012
>sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1
Length = 996
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 267/498 (53%), Gaps = 72/498 (14%)
Query: 5 YDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVK-GQDTIFGPYNLQDTAI 63
Y+ L T+I+ N N FY +QLLESD V+ WGR+G G + + NL D +
Sbjct: 539 YNVVLGITDIQKNKNSFYKLQLLESDMKNRFWVFRSWGRIGTTIGGNKLDNFSNLVDAIV 598
Query: 64 -----------NEFEQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQPQN-- 110
N FE + F ++ DY+ DS I++ ++
Sbjct: 599 QFKELYLEKSGNHFENRENFVKVAGRMYPIDIDYAE------------DSKIDLSAEHDI 646
Query: 111 -TKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVIH 169
+KL V + L+ ++ MK+ MME + K+PLG LS+ I Y VL I ++I
Sbjct: 647 KSKLPLSVQDIIKLMFDVDSMKRTMMEFDLDMEKMPLGKLSQKQIQSAYKVLTEIYELIQ 706
Query: 170 LPDRR-KLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLE 228
K + FYT+IPH+FG Q ++DT ++++ +M+ +L EIE A +LL+
Sbjct: 707 GGGTNAKFIDATNRFYTLIPHNFGTQ--SPPLLDTTEQVEQLRQMLDSLIEIECAYSLLQ 764
Query: 229 -DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSI 287
+D++ +P+ +Y++L +L PL D S E+ +
Sbjct: 765 TEDSKADINPIDKHYEQLKTKLEPL---DKNS----------------------EEYILL 799
Query: 288 AKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILS 347
KY+ NTHA+TH Y +++V IF+V R+GE R+K NR LLWHGSRLTN+ GILS
Sbjct: 800 QKYVKNTHAETHKLYDLEVVDIFKVARQGEARRYKPFKKLHNRRLLWHGSRLTNFAGILS 859
Query: 348 QGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLS 407
GL+IAPPEAP TGYMFGKG+YFADM S SA+YC S + G++LL EVALGDM E +
Sbjct: 860 HGLKIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTA 919
Query: 408 ANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIVY 452
A KLP+ K G G+T P+P E+ EDG LLYNE+I+Y
Sbjct: 920 AKY-VTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIY 978
Query: 453 SVDQIRMRYVVQVNFKYK 470
+ Q+ ++Y++++NFKYK
Sbjct: 979 DIAQVNIQYMLRMNFKYK 996
>sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp
PE=2 SV=1
Length = 994
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 265/498 (53%), Gaps = 66/498 (13%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
N+ Y L T+I+ N N +Y +QLL++D + ++ WGR+G ++ ++ +
Sbjct: 532 SNNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFDTSE 591
Query: 61 TAI------------NEFEQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQP 108
+A NE+EQ+ F +E Y +Q + V HE T
Sbjct: 592 SAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQ--KLVKHESHFFT----- 644
Query: 109 QNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVI 168
+KLE V + LI +I M + +ME + +K+PLG LS I Y V+K I +V+
Sbjct: 645 --SKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVL 702
Query: 169 HL-PDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLL 227
+ KL + FYT+IPH+FG Q +I+T Q+++ +M+ +L EIEVA +++
Sbjct: 703 ECGSNTAKLIDATNRFYTLIPHNFGVQL--PTLIETHQQIEDLRQMLDSLAEIEVAYSII 760
Query: 228 E-DDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFS 286
+ +D +PL +Y ++ QL L +S+ F
Sbjct: 761 KSEDVSDACNPLDNHYAQIKTQLVAL------DKNSEEFSI------------------- 795
Query: 287 IAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGIL 346
+++Y+ NTHA TH SY + IV +F+V R+GE RFK NR LLWHGSRLTN+ GIL
Sbjct: 796 LSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGIL 855
Query: 347 SQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELL 406
S GLRIAPPEAP TGYMFGKG+YFADM S SA+YC S + G++LL EVALGDM E
Sbjct: 856 SHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECT 915
Query: 407 SANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------------GHLLYNEYIV 451
SA +KL + K G G+T PDP ++ DG LLYNEYIV
Sbjct: 916 SAKY-INKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIV 974
Query: 452 YSVDQIRMRYVVQVNFKY 469
Y V Q+ ++Y+ ++ FKY
Sbjct: 975 YDVAQVNIQYLFRMEFKY 992
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2
Length = 1011
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/502 (38%), Positives = 273/502 (54%), Gaps = 72/502 (14%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G I+ A L +I +N +Y +QLLE D V+ WGRVG T+ G L+
Sbjct: 546 GGKIFSATLGLVDIVKGTNSYYKLQLLEDDRESRYWVFRSWGRVG-----TVIGSNKLEQ 600
Query: 61 TA---------INEFEQK----WQ---FTSYPKCYTWLERDYSANQTEESVVHEKPDSTI 104
+N +E+K W FT YPK + LE DY Q EE+V T+
Sbjct: 601 MPSKEDAVEHFLNLYEEKTGNSWHSKNFTKYPKKFYPLEIDY--GQDEEAVRK----LTV 654
Query: 105 NIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRI 164
+ + +KL + + +I ++ MK+ M+E + K+PLG LSK I Y +L +
Sbjct: 655 SAGTK-SKLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNEV 713
Query: 165 ADVIH-LPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVA 223
+ ++ LS FYT+IPHDFG +K ++ + ++ K++M+ L +IEVA
Sbjct: 714 QQAVSDGGSESQILDLSNRFYTLIPHDFGMKK--PPLLSNLEYIQAKVQMLDNLLDIEVA 771
Query: 224 TNLLEDDTQI-QADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILE 282
+LL + DP+ Y++L T + D S +K
Sbjct: 772 YSLLRGGNEDGDKDPIDINYEKLR---TDIKVVDKDSEEAKI------------------ 810
Query: 283 QTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNW 342
I +Y+ NTHA TH++Y + +V+IFR+EREGE++R+K NR LLWHGSR TN+
Sbjct: 811 ----IKQYVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNF 866
Query: 343 TGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDM 402
GILSQGLRIAPPEAP TGYMFGKG+YFADM S SA+YC+ S A G++LL EVALG+M
Sbjct: 867 AGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGNM 926
Query: 403 SELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE--------------DGGHLLYNE 448
EL +A S KLP GK KG+G+TAPDP TL+ + LLYNE
Sbjct: 927 YELKNA-SHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLGNGISTGINDTCLLYNE 985
Query: 449 YIVYSVDQIRMRYVVQVNFKYK 470
YIVY V Q+ ++Y++++ F YK
Sbjct: 986 YIVYDVAQVNLKYLLKLKFNYK 1007
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica
GN=PARP1 PE=2 SV=1
Length = 977
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 273/514 (53%), Gaps = 92/514 (17%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G IY+ LN +++ N +Y++Q++E D G +C V+ +WGRVG + G L++
Sbjct: 511 GKSIYNTTLNMSDLTRGVNSYYILQVIEEDNGSDCYVFRKWGRVG----NEKIGGTKLEE 566
Query: 61 T----AINEF---------------EQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPD 101
AI EF EQK F P + L+ DY Q +
Sbjct: 567 MSKIHAIQEFRRLFLEKTGNPWEAWEQKTNFQKQPGKFYPLDIDYGVRQGPKRK------ 620
Query: 102 STINIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVL 161
+I + L P++ + ++++ NI + M+E N +++PLG LSK I KG++ L
Sbjct: 621 ---DIDKMKSSLPPQLLELMNMLFNIETYRAAMLEFKINMSEMPLGKLSKENIQKGFEAL 677
Query: 162 KRIADVIHLPDRRKL---EQL----SGEFYTVIP--HDFGFQKMGDLVIDTPQKLKLKLE 212
I +++ + ++L E L S F+T+IP H Q DL++ K++
Sbjct: 678 TEIQNLLGNTNNQELAVRESLIVAASNRFFTLIPSIHPHIIQDEDDLMV--------KVK 729
Query: 213 MVKALGEIEVATNLLEDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGL 272
M++AL +IE+A+ L+ D+ + L Y++L C +TPL H + ++
Sbjct: 730 MLEALQDIEIASKLVGFDSD-NDESLDDKYKKLRCAITPLP------HDCEDYKL----- 777
Query: 273 ILPVSIIILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNS-KNRM 331
+ KYLLNTHA TH +S+++ ++F ++R+GE ++ + N+ N+M
Sbjct: 778 --------------VEKYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKM 823
Query: 332 LLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGV 391
LLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ S SA YC G+
Sbjct: 824 LLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGL 883
Query: 392 LLLCEVALGDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------- 441
+LL EVALGDM EL A S DK P GK TKG+G+T P E D
Sbjct: 884 MLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVP 942
Query: 442 -----GHLLYNEYIVYSVDQIRMRYVVQVNFKYK 470
L+YNEYIVY+ Q++M+Y+++V F +K
Sbjct: 943 ASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHK 976
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1
Length = 980
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 272/516 (52%), Gaps = 96/516 (18%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQD 60
G IY+A LN +++ N +YV+Q++E D G EC V+ +WGRVG + G L++
Sbjct: 514 GKSIYNATLNMSDLALGVNSYYVLQIIEQDDGSECYVFRKWGRVGSEK----IGGQKLEE 569
Query: 61 T----AINEF---------------EQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPD 101
AI EF E K F P + L+ DY +K
Sbjct: 570 MSKTEAIKEFKRLFLEKTGNSWEAWECKTNFRKQPGRFYPLDVDYGV---------KKAP 620
Query: 102 STINIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVL 161
+I + L P++ + + ++ N+ + MME N +++PLG LSK I KG++ L
Sbjct: 621 KRKDISEMKSSLAPQLLELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKENIEKGFEAL 680
Query: 162 KRIADVIH------LPDRRKL-EQLSGEFYTVIP--HDFGFQKMGDLVIDTPQKLKLKLE 212
I +++ L R L S F+T+IP H + DL+I K +
Sbjct: 681 TEIQNLLKDTADQALAVRESLIVAASNRFFTLIPSIHPHIIRDEDDLMI--------KAK 732
Query: 213 MVKALGEIEVATNLLEDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGL 272
M++AL +IE+A+ ++ + L Y +LHC +TPLA H S+ ++
Sbjct: 733 MLEALQDIEIASKIV-GFDSDSDESLDDKYMKLHCDITPLA------HDSEDYKL----- 780
Query: 273 ILPVSIIILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNS-KNRM 331
I +YLLNTHA TH +S+++ ++F ++R+GE ++ + N+ N+M
Sbjct: 781 --------------IEQYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKM 826
Query: 332 LLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGV 391
LLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ S SA YC G+
Sbjct: 827 LLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGL 886
Query: 392 LLLCEVALGDMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE------------ 439
+LL EVALGDM EL A S DK P GK TKG+G+T PLE+E ++
Sbjct: 887 MLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTV--PLESEFVKWRDDVVVPCGKP 943
Query: 440 -----DGGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 470
L+YNEYIVY+ Q++M+++++V F +K
Sbjct: 944 VPSSIRSSELMYNEYIVYNTSQVKMQFLLKVRFHHK 979
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 269/510 (52%), Gaps = 85/510 (16%)
Query: 1 GNDIYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVG-----------VKGQ 49
GN IY+ L+ +++ N +Y++Q+++ D G +C V+ +WGRVG +
Sbjct: 518 GNSIYNTTLSMSDLSTGINSYYILQIIQEDKGSDCYVFRKWGRVGNEKIGGNKVEEMSKS 577
Query: 50 DTI--FGPYNLQDTA--INEFEQKWQFTSYPKCYTWLERDYSANQTEESVVHEKPDSTIN 105
D + F L+ T +EQK F P + L+ DY N+ V ++P T
Sbjct: 578 DAVHEFKRLFLEKTGNTWESWEQKTNFQKQPGKFLPLDIDYGVNK---QVAKKEPFQT-- 632
Query: 106 IQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIA 165
++ L P + + + ++ ++ + MME N +++PLG LSK I KG++ L I
Sbjct: 633 ----SSNLAPSLIELMKMLFDVETYRSAMMEFEINMSEMPLGKLSKHNIQKGFEALTEIQ 688
Query: 166 DVIHLPDRRK------LEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGE 219
++ D + L S F+T+IP + +I K K++M++AL +
Sbjct: 689 RLLTESDPQPTMKESLLVDASNRFFTMIP------SIHPHIIRDEDDFKSKVKMLEALQD 742
Query: 220 IEVATNLLEDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSII 279
IE+A+ ++ D + L Y++LHC ++PL H S+ ++
Sbjct: 743 IEIASRIVGFDVD-STESLDDKYKKLHCDISPLP------HDSEDYRL------------ 783
Query: 280 ILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERF----KKLSNSKNRMLLWH 335
I KYL THA TH+ +S+++ ++F +EREGE +++ +KL N +MLLWH
Sbjct: 784 -------IEKYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPHREKLGN---KMLLWH 833
Query: 336 GSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLC 395
GSRLTN+ GIL+QGLRIAPPEAPATGYMFGKG+YFAD+ S SA YC G++LL
Sbjct: 834 GSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLS 893
Query: 396 EVALGDMSELLSANSDADKLPDGKLITKGVGQTAPDPLE---------------AETLED 440
EVALG++ EL A DK P GK TKG+G+ P E +
Sbjct: 894 EVALGEIHELTKAKY-MDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVK 952
Query: 441 GGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 470
L+YNEYIVY Q++++++++V FK+K
Sbjct: 953 ASELMYNEYIVYDTAQVKLQFLLKVRFKHK 982
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 258/507 (50%), Gaps = 82/507 (16%)
Query: 4 IYDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQDTAI 63
+Y A L+ T++ N N +Y IQLL+ D V+ WGRVG + Y+ + AI
Sbjct: 476 LYQATLSFTDLTQNKNSYYKIQLLKDDQRENYYVFRSWGRVGTEVGGNKHESYSNSNEAI 535
Query: 64 NEFE--------QKW----QFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQPQNT 111
+F+ W F P ++++E DYS E + + + I P +
Sbjct: 536 LKFQDVFHEKTKNDWIYRKHFRKMPGMFSYVETDYS----EFAQI-----TDTEITPGSK 586
Query: 112 KLEPRVAKFLSL-ICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADV-IH 169
L P+ K + + I ++ MK + + NK+PLG LS + I ++VL I+D+ +
Sbjct: 587 TLLPKSVKEVVMSIFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEVLNDISDLLVK 646
Query: 170 LP-DRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLE 228
LP D ++ S +FYT+IPH+FG + ID+ K+K K M+ AL +I+ A + +
Sbjct: 647 LPIDASRILDFSNKFYTIIPHNFGMRVPEP--IDSFHKIKEKNNMLNALLDIKFAYDQIS 704
Query: 229 D-----DTQIQADPLYAYYQRLHCQLTPLA-GADLASHHSKYFQFSKIGLILPVSIIILE 282
T + DP+ YQ+L C + PL G D +
Sbjct: 705 GGDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWN----------------------- 741
Query: 283 QTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNW 342
I +YL NTH TH V+++ I ++ R+ E+ +FK+ + NR LLWHGS N+
Sbjct: 742 ---MIHQYLKNTHGATHD-LKVELIDILKLNRDNESSKFKR--HIGNRRLLWHGSGKMNF 795
Query: 343 TGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDM 402
GIL QGLRIAPPEAP +GYMFGKGVYFADMFS S YC A+ A LLLC+VALG++
Sbjct: 796 AGILGQGLRIAPPEAPVSGYMFGKGVYFADMFSKSFFYCRAN-AKEEAYLLLCDVALGNV 854
Query: 403 SELL-SANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG-------------------G 442
+L+ S N LP G +G+G+ P + + DG
Sbjct: 855 QQLMASKNVSRQTLPAGFQSVQGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDY 914
Query: 443 HLLYNEYIVYSVDQIRMRYVVQVNFKY 469
HLLYNE+IVY VDQI+++Y+V+V +
Sbjct: 915 HLLYNEFIVYDVDQIQLKYLVRVKMHH 941
>sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3
Length = 533
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 237/506 (46%), Gaps = 81/506 (16%)
Query: 5 YDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQDTAIN 64
Y+ LNQTNIE+N+N FY+IQLL+ D ++ WGRVG GQ I L+D A
Sbjct: 66 YNCTLNQTNIENNNNKFYIIQLLQ-DSNRFFTCWNHWGRVGEVGQSKINHFTRLED-AKK 123
Query: 65 EFEQKWQ------------FTSYPKCYTWLERDYSANQTEESVVH--EKPDSTINIQPQN 110
+FE+K++ F S+P YT +E + ++ +E+VV P T+ + Q
Sbjct: 124 DFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQ-AEDEAQEAVVKVDRGPVRTVTKRVQP 182
Query: 111 TKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKRIADVIHL 170
L+P K ++ I + M K M + + K+PLG LSK I +G++ L+ + + +
Sbjct: 183 CSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKG 242
Query: 171 PDR--RKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLL- 227
P + LE+LS FYTVIPH+FG + I++P+ L+ K +M+ L +IE+A L
Sbjct: 243 PTDGGQSLEELSSHFYTVIPHNFGHSQPPP--INSPELLQAKKDMLLVLADIELAQALQA 300
Query: 228 --EDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTF 285
E + ++ P + + L D + K Q LEQT
Sbjct: 301 VSEQEKTVEEVP-HPLDRDYQLLKCQLQLLDSGAPEYKVIQ------------TYLEQTG 347
Query: 286 SIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGI 345
S N T + I++V +EGE +RF+ S NR LLWHG+ + I
Sbjct: 348 S------NHRCPT-------LQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAI 394
Query: 346 LSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADY-----CNASPAATAGVLLLCEVALG 400
L+ GLRI P +G GKG+YFA S SA Y C A G + L EVALG
Sbjct: 395 LTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAH---HVGYMFLGEVALG 447
Query: 401 DMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLE-DGGHLLY------------- 446
+ + N P G G T PDP + LE DG ++
Sbjct: 448 REHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSS 507
Query: 447 -----NEYIVYSVDQIRMRYVVQVNF 467
+EY++Y Q R+RY+++V+
Sbjct: 508 STFSQSEYLIYQESQCRLRYLLEVHL 533
>sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenorhabditis elegans
GN=pme-2 PE=2 SV=1
Length = 538
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 241/534 (45%), Gaps = 92/534 (17%)
Query: 5 YDARLNQTNIEDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQDTAIN 64
Y L +TNI N+N FY ++LL D GG+ +V GR+G +G T ++ D A
Sbjct: 12 YKVHLCKTNIAQNNNKFYDMELL--DEGGDFIVKLINGRIGYRGV-TQLKDFDDLDRAKK 68
Query: 65 EFEQKWQFTSY-----------PKCYTWLERDYSANQTEESVVHEKPDSTINIQPQNTKL 113
FE K+ ++ P Y +E +A QTE+ V E+P+ + +NT+
Sbjct: 69 FFESKFYEKTHLHWEERDDEPVPNKYAVVELATNARQTEKEVKKEEPEPEPKVDEKNTRG 128
Query: 114 EPR-----------------------VAKFLSLICNISMMKQVMMEIGYN-ANKLPLGTL 149
+ + + + IC+ + ++ ++ +N A P+ L
Sbjct: 129 RKKRGIVKEKKEIKKEEEPVEEVNEKLKELMKCICDEDVHLGLLKQLKFNEAFGRPIDCL 188
Query: 150 SKSTILKGYDVLKRIADVI-------------HLPDRRKLEQLSG-------EFYTVIPH 189
S + + GY++L +I + I + DR + G ++Y++IPH
Sbjct: 189 SLAQLTTGYEILSKIEESIGGKSARRSTRGRPRVADRVLAVKSDGPSLHDINKYYSLIPH 248
Query: 190 DFGFQKMGDLVIDTPQKLKLKLEMVKAL-GEIEVATNLLEDDTQIQADPLYA-YYQRLHC 247
FGF ID+ K++ + E++ AL G IE + L + + +Y Y+RL C
Sbjct: 249 SFGF--CVPPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERLPC 306
Query: 248 QLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFS-IAKYLLNTHAKTHSSYSVDI 306
L P++ ++A KIG L + S I + L + + V++
Sbjct: 307 HLEPVS-EEIAG---------KIGDCLAMRGPTHCYKLSLIDAFELKDPNEIPTEAPVEV 356
Query: 307 VQIFRVE-REGETERFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFG 365
++ + R+ + + LLWHG+R+TN IL GL+ P G MFG
Sbjct: 357 QEVPKKRGRKSTKTAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQF--PVGDRCGLMFG 414
Query: 366 KGVYFADMFSNSADYCNASPAATAGV-LLLCEVALGDMSELLSANSDAD-KLPDGKLITK 423
GVYFA++ + SA+YC P A+ V +LLCEV + L + DAD K+ K +
Sbjct: 415 NGVYFANVPTKSANYC--CPEASKRVFMLLCEVETANPLVLYESEIDADEKMEKAKKTSV 472
Query: 424 -GVGQTAP-DPLEA----------ETLEDGGHLLYNEYIVYSVDQIRMRYVVQV 465
G+ P D +E ET+E+ LLY+EY++++ + +++YVV+V
Sbjct: 473 YAAGKHTPRDTVEINGIPAFKSNLETIEEETRLLYDEYVMFNKEHFKIKYVVEV 526
>sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou
GN=parp1 PE=2 SV=2
Length = 135
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 95/158 (60%), Gaps = 26/158 (16%)
Query: 210 KLEMVKALGEIEVATNLLEDDTQ-IQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFS 268
K+EM+ L +IEVA +LL+ + + DP+ Y++L ++ ++ +K +
Sbjct: 3 KVEMLDNLLDIEVAYSLLKGGAEDNKKDPIDINYEKLKTKI------EVVDKTTKEAEI- 55
Query: 269 KIGLILPVSIIILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSK 328
I +Y+ NTHA TH++Y++ + +IF++ REGE ++++ +
Sbjct: 56 ------------------ILQYVKNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQDLP 97
Query: 329 NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGK 366
NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGK
Sbjct: 98 NRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK 135
>sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula
GN=PARP3 PE=3 SV=1
Length = 799
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 174/396 (43%), Gaps = 63/396 (15%)
Query: 104 INIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
+ I + KLEP VA F+ ++C+ + K +ME+GY++ LP+G ++ + + ++L
Sbjct: 430 LGIAATHCKLEPMVANFMKVLCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEEIL-- 487
Query: 164 IADVIHLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDT-PQKLKLKLEM-------VK 215
+ ++ K + +G I DF QK L+ T P + E+ ++
Sbjct: 488 ----LEFIEKVKTLKETGPKADAIWSDFS-QKWFTLMHSTRPFIFRDYQEIADHAAAALE 542
Query: 216 ALGEIEVATNLLED-DTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLIL 274
+ +I +A++L+ D DPL Y++L C +TPL +S ++
Sbjct: 543 GVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSITPL------EKNSNDYEM------- 589
Query: 275 PVSIIILEQTFSIAKYLLNTHAKTHS---SYSVDIVQIFRVEREGETERFKKLSNSKNRM 331
I KYL T+ Y V + IF VE + + N++
Sbjct: 590 ------------IVKYLEKTYEPVKVGDIEYGVSVENIFTVESSA-CPSYADIVKMPNKV 636
Query: 332 LLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGV 391
LLW GSR +N L +G A P GYMFGK + +D + +A Y + G
Sbjct: 637 LLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGF 696
Query: 392 LLLCEVALG-DMSELLSANSDADKLPDGKLITKGVGQTAPDPLE---------------- 434
L+L +LG +++EL S D L + K+ KG+G+ D E
Sbjct: 697 LVLAIASLGNEITELKSPPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIKVPCGSII 756
Query: 435 AETLEDGGHLLYNEYIVYSVDQIRMRYVVQVNFKYK 470
A ED L YNEY VY Q+R+ Y+V V ++ K
Sbjct: 757 ASEHEDSP-LEYNEYAVYDPKQVRISYLVGVKYEEK 791
>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5
PE=2 SV=1
Length = 2276
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 214/527 (40%), Gaps = 121/527 (22%)
Query: 5 YDARLNQTNI---EDNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQDT 61
+D +N+T++ ++FY +Q+++ +++ WGR+G + P+N +
Sbjct: 1800 FDVLMNKTDLMYGRCGFHNFYRMQIIKRRDAELFILFTNWGRIGSGMGEFQTTPFNSLEL 1859
Query: 62 AINEFE--------QKW----QFTSYPKCYTWLERDYSANQTEESVVHEKPDSTINIQPQ 109
A EF+ +W F PK Y +E D + E + K +
Sbjct: 1860 AAKEFKSIFKSKSGNEWAPLANFRDMPKKYRLVETDSTPTSLAEIELTWK---------K 1910
Query: 110 NTKLEPRVAKFLSLICNISMMKQVMMEIG-YNANKLPLGTLSKSTILKGYDVL------- 161
NT+ +P + + ++ I + +K ++ Y + P G +K I K VL
Sbjct: 1911 NTEKDP-IRRMIADISDAKTLKTYASQVQMYGGSSQPFGRFTKENIEKAKLVLDKLEKNA 1969
Query: 162 KRIADVIH----------LPDRRKLEQLSGEFYTVIPH-DFGFQKMGDLVIDTPQKLKLK 210
RI ++ L +LSG++Y++IP ++ F + L D +++
Sbjct: 1970 NRIKQMVEAQTGVVESNLLDAYITTSELSGDYYSLIPSGEYEFSNLTRL--DNVEEIARH 2027
Query: 211 LEMVKALGEIEVATNLLEDDTQIQADPLYAYYQR--LHCQL---TPLAGADLASH----- 260
+ EIE AT LL + + D Y R + C+ TP +D++
Sbjct: 2028 RARLNRCQEIETATRLL-CAAEFRQDLDRVDYIRSAIQCEYRLETP--DSDISQRLLQWI 2084
Query: 261 HSKYFQFSKIGLILPVSIIILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETER 320
H+ + +K+ +IL +S ++ TE+
Sbjct: 2085 HNSGGKQAKVKMILEISPML------------------------------------STEK 2108
Query: 321 FKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADY 380
F+ N N+ LWHG++ TN IL G I PP A G +FG G+Y AD F S Y
Sbjct: 2109 FEPFVNDDNQKFLWHGTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHY 2168
Query: 381 CNASPAATAGVLLLCEVALGDMSELLS--------ANSDA-----------DKLPDGKLI 421
C S A +L+C+ ALG + L + ++S A D+ P G L
Sbjct: 2169 CQPS-AGGINYMLVCQTALGKVRTLDTIPYHYMNQSSSSAEKYEDTLHYIGDRFPAGSLT 2227
Query: 422 TKGVGQ-----TAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVV 463
GVG DP++ G L ++EYIV + +++ +Y+V
Sbjct: 2228 NDGVGMPLLPLRKRDPIQGSNY-GFGTLDFSEYIVRNPNRVLPKYIV 2273
>sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
Length = 815
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 174/395 (44%), Gaps = 61/395 (15%)
Query: 104 INIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
+ I + KLEP VA F+ ++C+ + K +ME+GY+ LP+G ++ + K DVL
Sbjct: 443 LGIAATHCKLEPLVANFMKVLCSQEIYKYALMEMGYDCPDLPIGMVTNLHLKKCEDVLLE 502
Query: 164 IADVIHLPDRR--KLEQLSGEF--------YTVIPHDF-GFQKMGDLVIDTPQKLKLKLE 212
D + K E + +F ++ P +F +Q++ D LE
Sbjct: 503 FIDKVKSLKETGPKAEAVWTDFSQRWFTLMHSTRPFNFRDYQEIADHAAAA-------LE 555
Query: 213 MVKALGEIEVATNLLEDDT-QIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIG 271
V+ +I A++L+ D T DPL Y++L C ++ L D +S +
Sbjct: 556 GVR---DITQASHLIGDMTGSTIDDPLSETYKKLGCSISAL---DKSSDDYEMI------ 603
Query: 272 LILPVSIIILEQTFSIAKYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRM 331
+ LE+T+ K Y V + IF V+ G ++ + N++
Sbjct: 604 ------VKYLEKTYEPVKV-------GDIEYGVSVENIFAVQT-GGCPSYEDIIKLPNKV 649
Query: 332 LLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGV 391
LLW GSR +N L +G A P GYMFGK + +D + +A Y + G
Sbjct: 650 LLWCGSRSSNLLRHLQKGFLPAICSLPIPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGF 709
Query: 392 LLLCEVALG-DMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG-----GHLL 445
L+L +LG +++EL + DA L + K+ KG G+ D E +D G L+
Sbjct: 710 LVLAIASLGNEITELKTPPEDASSLEEKKVGVKGPGKKKTDESEHFVWKDDIKVPCGKLV 769
Query: 446 ----------YNEYIVYSVDQIRMRYVVQVNFKYK 470
YNEY VY + R+ Y+V V ++ K
Sbjct: 770 ASDHQDSPLEYNEYAVYDKKRARISYLVGVKYEEK 804
>sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica
GN=PARP3 PE=2 SV=1
Length = 831
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 169/392 (43%), Gaps = 69/392 (17%)
Query: 110 NTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYD-VLKRIADVI 168
+ KL+P V + +C+ + + + E+G++ LP+G L+ + +G + +L+ DV
Sbjct: 466 HCKLDPSVTFIMKQLCSQEIYRYALTEMGHDVPDLPIGMLTDLHLKRGEETLLEWKQDVE 525
Query: 169 HLPDRRKLE-----QLSGEFYTVIPHDF-----GFQKMGDLVIDTPQKLKLKLEMVKALG 218
P+ ++S +++T+ P G++++ D V LE V+
Sbjct: 526 SAPESGPAADAFWMEISNKWFTLFPTTRPYTMKGYEQIADNVASG-------LETVR--- 575
Query: 219 EIEVATNLLEDD-TQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVS 277
+I VA+ L+ D DPL Y++L C + + S+ ++
Sbjct: 576 DINVASRLIGDVFGSTLDDPLSQCYKKLGCSINRVV------EDSEDYKM---------- 619
Query: 278 IIILEQTFSIAKYLLNTHAKTHSS---YSVDIVQIFRVEREGETERFKKLSNSKNRMLLW 334
I KYL T+ YS + +I+ VE + ++ N++LLW
Sbjct: 620 ---------ILKYLEKTYEPVKVGDVVYSATVERIYAVESSA-LPSYDEIKKLPNKVLLW 669
Query: 335 HGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLL 394
G+R +N L G A P GYMFGK + +D + +A Y + G L+L
Sbjct: 670 CGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALYGFTAVDRPEGYLVL 729
Query: 395 CEVALG-DMSELLS--ANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG---------- 441
+LG ++ E+ + D ++ + K+ KGVG+ DP E T DG
Sbjct: 730 AVASLGKEIQEITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDGVTVPCGKLVP 789
Query: 442 -----GHLLYNEYIVYSVDQIRMRYVVQVNFK 468
G L YNEY VY Q+ + ++V V ++
Sbjct: 790 STNKDGPLEYNEYAVYDPKQVSIAFLVGVKYE 821
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 168/396 (42%), Gaps = 63/396 (15%)
Query: 104 INIQPQNTKLEPRVAKFLSLICNISMMKQVMMEIGYNANKLPLGTLSKSTILKGYDVLKR 163
+ I + KL+ VA F+ ++C + +ME+G + LP+G L+ + + +VL
Sbjct: 443 LGIASAHCKLDSFVANFIKVLCGQEIYNYALMELGLDPPDLPMGMLTDIHLKRCEEVL-- 500
Query: 164 IADVIHLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMV-------KA 216
+ ++ K + +G+ + DF + + P +L E+ +
Sbjct: 501 ----LEFVEKVKTTKETGQKAEAMWADFSSRWFSLMHSTRPMRLHDVNELADHAASAFET 556
Query: 217 LGEIEVATNLLED-DTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILP 275
+ +I A+ L+ D DPL Y++L C+++ + S+ ++
Sbjct: 557 VRDINTASRLIGDMRGDTLDDPLSDRYKKLGCKIS------VVDKESEDYKM-------- 602
Query: 276 VSIIILEQTFSIAKYLLNTHAKTHSS---YSVDIVQIFRVEREG--ETERFKKLSNSKNR 330
+ KYL T+ S Y V + +F VE + + KKL N+
Sbjct: 603 -----------VVKYLETTYEPVKVSDVEYGVSVQNVFAVESDAIPSLDDIKKLP---NK 648
Query: 331 MLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAG 390
+LLW GSR +N + +G A P GYMFG+ + +D + +A Y + G
Sbjct: 649 VLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEG 708
Query: 391 VLLLCEVALG-DMSELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLEDG-----GHL 444
L+L +LG +++E S D L D K+ KG+G+ + E D G L
Sbjct: 709 FLVLAVASLGEEVTEFTSPPEDTKTLEDKKIGVKGLGRKKTEESEHFMWRDDIKVPCGRL 768
Query: 445 L----------YNEYIVYSVDQIRMRYVVQVNFKYK 470
+ YNEY VY Q +R++V+V ++ K
Sbjct: 769 VPSEHKDSPLEYNEYAVYDPKQTSIRFLVEVKYEEK 804
>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3
Length = 1724
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 54/299 (18%)
Query: 175 KLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLEDDTQIQ 234
+L+++ EFY +IPH K +L + L K ++ + + ++ N+ E +
Sbjct: 316 QLQKMMTEFYRLIPHKGTMPKEVNLGL-----LAKKADLCQLIRDM---VNVCETNLSKP 367
Query: 235 ADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLILPVSIIILEQTFSIAKYLLNT 294
P A Y+ L C++ + E+ + K +L
Sbjct: 368 NPPSLAKYRALRCKIEHVEQNT-------------------------EEFLRVRKEVLQN 402
Query: 295 HAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAP 354
H HS VD++QIFRV R ET F LS N L HGS + N GIL +GL + P
Sbjct: 403 H---HSKSPVDVLQIFRVGRVNETTEF--LSKLGNVRPLLHGSPVQNIVGILCRGL-LLP 456
Query: 355 PEAPATGYM------FGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGDMSELLSA 408
G G G+YF+D S S Y + +LL+C+VALG +L
Sbjct: 457 KVVEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGKCMDLHEK 516
Query: 409 NSDADKLPDGKLITKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVVQVNF 467
+ + P G GV QTA + E +E++VY +Q++M+Y+++ +
Sbjct: 517 DFSLTEAPPGYDSVHGVSQTASVTTDFED---------DEFVVYKTNQVKMKYIIKFSM 566
>sp|O55721|PARP_IIV6 Putative poly [ADP-ribose] polymerase-like 100L OS=Invertebrate
iridescent virus 6 GN=IIV6-100L PE=4 SV=1
Length = 181
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 308 QIFRVEREGETERFKKL---SNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPA-TGYM 363
+I+ V+R E E F K S SK LL HG+R ++ IL GL+I P + +G +
Sbjct: 27 KIYTVQRFKEEEPFNKYISESVSKKTRLLIHGTRCSSVIPILQTGLKIRPSTSVHFSGKV 86
Query: 364 FGKGVYFADMFSNSADYCNASPAATAGVLLLCEVALGD--MSELLSANSDADKLPDGKLI 421
+G+G YF++ S +Y +LL+ EV +G+ + E KL +L+
Sbjct: 87 YGEGNYFSEHVQKSLNYTGWDNDQ---ILLIYEVHVGNEYIYEGWYNGDRGIKLNYNELL 143
Query: 422 TKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVVQV 465
G T ++ G L +E I Y+ DQ +++Y++ +
Sbjct: 144 QNGYNSTY--------VKAGNGLQNSEIISYNEDQSKIKYIIHI 179
>sp|Q8N3A8|PARP8_HUMAN Poly [ADP-ribose] polymerase 8 OS=Homo sapiens GN=PARP8 PE=2 SV=1
Length = 854
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 334 WHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSNSADY 380
+HGS + NW IL GL +A G M+G G+Y + M S S Y
Sbjct: 696 FHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGY 743
>sp|Q3UD82|PARP8_MOUSE Poly [ADP-ribose] polymerase 8 OS=Mus musculus GN=Parp8 PE=2 SV=1
Length = 852
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 334 WHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSNSADY 380
+HGS + NW IL GL +A G M+G G+Y + M S S Y
Sbjct: 694 FHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGY 741
>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2
Length = 1166
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 36/163 (22%)
Query: 318 TERFKKLS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADM 373
T R K++S N N +L+HGS N I+ +G G MFG G+YFA+
Sbjct: 1010 THRRKEVSEENHNHANERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAEN 1064
Query: 374 FSNSADYCNASPAATAGV-------------LLLCEVALGDMSELLSANSDADKLPDGKL 420
S S Y T LL C V LG SA A P
Sbjct: 1065 SSKSNQYVYGIGGGTGCPIHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHS 1124
Query: 421 ITKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVV 463
+T G+ + + L EY++Y +Q Y++
Sbjct: 1125 VT---GRPSVNGLA-----------LAEYVIYRGEQAYPEYLI 1153
>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1
Length = 1166
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 36/163 (22%)
Query: 318 TERFKKLS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADM 373
T R K++S N N +L+HGS N I+ +G G MFG G+YFA+
Sbjct: 1010 THRRKEVSEENHNHANERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAEN 1064
Query: 374 FSNSADYCNASPAATAGV-------------LLLCEVALGDMSELLSANSDADKLPDGKL 420
S S Y T LL C V LG SA A P
Sbjct: 1065 SSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHS 1124
Query: 421 ITKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVV 463
+T G+ + + L EY++Y +Q Y++
Sbjct: 1125 VT---GRPSVNGLA-----------LAEYVIYRGEQAYPEYLI 1153
>sp|Q7Z3E1|PARPT_HUMAN TCDD-inducible poly [ADP-ribose] polymerase OS=Homo sapiens
GN=TIPARP PE=2 SV=1
Length = 657
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 14/123 (11%)
Query: 289 KYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRML-----------LWHGS 337
+ + N KT + I+QI RV+ + E++K+ NR + L+HG+
Sbjct: 475 RIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMFGRDRIINERHLFHGT 534
Query: 338 RLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEV 397
GI P MFG+G YFA S S ++ S + + L +V
Sbjct: 535 SQDVVDGICKHNF--DPRVCGKHATMFGQGSYFAKKASYSHNFSKKS-SKGVHFMFLAKV 591
Query: 398 ALG 400
G
Sbjct: 592 LTG 594
>sp|Q8C1B2|PARPT_MOUSE TCDD-inducible poly [ADP-ribose] polymerase OS=Mus musculus
GN=Tiparp PE=2 SV=1
Length = 657
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 14/123 (11%)
Query: 289 KYLLNTHAKTHSSYSVDIVQIFRVEREGETERFKKLSNSKNRML-----------LWHGS 337
+ + N KT + I+QI RV+ + E++K+ NR + L+HG+
Sbjct: 475 RIIYNLFHKTVPEFKYRILQILRVQNQFLWEKYKRKKEYMNRKMSGRDRIINERHLFHGT 534
Query: 338 RLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSNSADYCNASPAATAGVLLLCEV 397
GI P MFG+G YFA S S ++ S + + L +V
Sbjct: 535 SQDVVDGICKHNF--DPRVCGKHATMFGQGSYFAKKASYSHNFSKKS-SKGVHFMFLAKV 591
Query: 398 ALG 400
G
Sbjct: 592 LTG 594
>sp|A4SJR0|GLMM_AERS4 Phosphoglucosamine mutase OS=Aeromonas salmonicida (strain A449)
GN=glmM PE=3 SV=1
Length = 444
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 416 PDGKLITKGVGQTAPDPLEAETLE-----------DGGHLLYNEYIVYSVDQIRMRYVV 463
PDG I GVG TAPD L A+ LE DG L+ ++ Y +D + Y++
Sbjct: 207 PDGLNINDGVGSTAPDALAAKVLECKADLGVAFDGDGDRLVMVDHTGYIIDGDEILYII 265
>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2
Length = 1327
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 305 DIVQIFRVEREGETERF----KKLS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 356
++++I +V + ERF K++S N N +L+HGS N I+ +G
Sbjct: 1146 NVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFIN--AIIHKGFD---ER 1200
Query: 357 APATGYMFGKGVYFADMFSNSADY 380
G MFG G+YFA+ S S Y
Sbjct: 1201 HAYIGGMFGAGIYFAENSSKSNQY 1224
>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1
Length = 1320
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 40/180 (22%)
Query: 305 DIVQIFRVEREGETERF----KKLS----NSKNRMLLWHGSRLTNWTGILSQGLRIAPPE 356
++++I +V + ERF K++S N N +L+HGS N I+ +G
Sbjct: 1139 NVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFIN--AIIHKGFD---ER 1193
Query: 357 APATGYMFGKGVYFADMFSNSADYCNASPAATAGV-------------LLLCEVALGDMS 403
G MFG G+YFA+ S S Y T +L C V LG
Sbjct: 1194 HAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSF 1253
Query: 404 ELLSANSDADKLPDGKLITKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMRYVV 463
S A P + +G+ + + L Y EY++Y +Q Y++
Sbjct: 1254 LQFSTMKMAHAPPGHHSV---IGRPSVNGLA-----------YAEYVIYRGEQAYPEYLI 1299
>sp|O67898|SYGB_AQUAE Glycine--tRNA ligase beta subunit OS=Aquifex aeolicus (strain VF5)
GN=glyS PE=3 SV=1
Length = 664
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 218 GEIEVATNLLEDDTQIQADPLYAYYQRLHCQLTPLAGADLASHHSKYFQFSKIGLIL 274
G +E TNL+E P+ + + +L PL +A+HH ++F F K G +L
Sbjct: 240 GLVEEVTNLVE-----YPFPVLGKFDEKYLELPPLVITTVAAHHQRFFCFEKDGKLL 291
>sp|Q9URX8|NG06_SCHPO Probable nucleoporin C890.06 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC890.06 PE=3 SV=3
Length = 1315
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 154 ILKGYDVLKRIADVIHLPDRRKLEQLSGEFYTVIPHDFGFQKMGDLVIDTPQKLKLKLEM 213
I K + LK+ D + + +R+ L +LS + H F TP+ L+L +E
Sbjct: 820 IFKAVESLKKAKDTVDIEERQSLIELSYTLFKKAAHVF-----------TPEDLRLAVEE 868
Query: 214 VKALGEIEVATNL 226
K+L A NL
Sbjct: 869 YKSLNAYTTAVNL 881
>sp|Q3A187|Y2632_PELCD UPF0178 protein Pcar_2632 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=Pcar_2632 PE=3 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 2.6, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 409 NSDADKLPDGKLITKGVGQTAPDPLEAETLEDGGHLLYNEYIVYSVDQIRMR 460
N KL G L+ TA PL A+ +E GGH L +Y+VD IR R
Sbjct: 59 NEIVKKLDAGDLVI-----TADIPLAAQVIEKGGHALNPRGELYTVDNIRER 105
>sp|Q5RDU4|PARP6_PONAB Poly [ADP-ribose] polymerase 6 OS=Pongo abelii GN=PARP6 PE=2 SV=1
Length = 610
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 320 RFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSNSA 378
RF+ +HGS + NW IL GL A + G +GKG+Y + + S S
Sbjct: 438 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 497
Query: 379 DY 380
Y
Sbjct: 498 GY 499
>sp|Q6P6P7|PARP6_MOUSE Poly [ADP-ribose] polymerase 6 OS=Mus musculus GN=Parp6 PE=2 SV=1
Length = 630
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 320 RFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSNSA 378
RF+ +HGS + NW IL GL A + G +GKG+Y + + S S
Sbjct: 458 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 517
Query: 379 DY 380
Y
Sbjct: 518 GY 519
>sp|Q2NL67|PARP6_HUMAN Poly [ADP-ribose] polymerase 6 OS=Homo sapiens GN=PARP6 PE=2 SV=1
Length = 630
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 320 RFKKLSNSKNRMLLWHGSRLTNWTGILSQGLRIAP-PEAPATGYMFGKGVYFADMFSNSA 378
RF+ +HGS + NW IL GL A + G +GKG+Y + + S S
Sbjct: 458 RFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISF 517
Query: 379 DY 380
Y
Sbjct: 518 GY 519
>sp|O61366|GPRS_DROME Serine-enriched protein OS=Drosophila melanogaster GN=gprs PE=4 SV=3
Length = 1302
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 16 DNSNDFYVIQLLESDGGGECMVYDRWGRVGVKGQDTIFGPYNLQDTAINEFEQKWQFTSY 75
D D +Q L+S G +V +W + +G+ + PY+ +DT+ + ++Q TSY
Sbjct: 950 DTETDLINLQRLDSGGDSFELVESKWSKSS-RGESSFDCPYSSRDTSFDVSISRYQSTSY 1008
>sp|Q7YTA6|PHG1C_DICDI Putative phagocytic receptor 1c OS=Dictyostelium discoideum
GN=phg1c PE=2 SV=1
Length = 655
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 190 DFGFQKMGDLVIDTPQKLKLKLEMVKALGEIEVATNLLEDDTQIQADPLYAYYQRLHCQL 249
D GF + + ++ + K++ +G +E++ L +DD Q Y Y R H
Sbjct: 219 DKGFYTIKSVNVEPYSCVDCKID--SGIGGVEISPELFDDDKIKQLTIQYTYSIRNHETT 276
Query: 250 TPLAGADLASHHSKY---FQFSKIGLILPVSIIILEQTFSIAKYLLNTHAKTHS 300
T +G S Y F+ S I +I+ II+L + +A LL KT+S
Sbjct: 277 TTNSGKSFQSWSIYYVNQFKLSNIDIIMSF-IIVLAVSACLAIILLKIFRKTNS 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,704,541
Number of Sequences: 539616
Number of extensions: 7504047
Number of successful extensions: 17025
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 16841
Number of HSP's gapped (non-prelim): 63
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)