Query 043136
Match_columns 902
No_of_seqs 1175 out of 6724
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:22:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.5E-90 2.2E-94 845.4 44.3 598 17-634 4-755 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.5E-70 8.7E-75 671.6 39.5 515 78-596 126-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 6.3E-64 2.2E-68 608.8 44.5 543 78-620 25-624 (680)
4 3t6q_A CD180 antigen; protein- 100.0 1.6E-61 5.4E-66 579.8 33.2 493 103-598 34-564 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 8E-60 2.7E-64 572.8 48.4 531 82-615 8-594 (680)
6 4eco_A Uncharacterized protein 100.0 3.7E-62 1.3E-66 585.8 27.0 499 23-570 28-600 (636)
7 3j0a_A TOLL-like receptor 5; m 100.0 6.2E-60 2.1E-64 585.4 39.2 544 66-630 14-591 (844)
8 4ecn_A Leucine-rich repeat pro 100.0 2.7E-60 9.2E-65 578.4 30.2 525 20-593 264-863 (876)
9 3t6q_A CD180 antigen; protein- 100.0 9E-60 3.1E-64 564.6 32.9 494 78-574 33-564 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-59 3.6E-64 564.0 33.0 510 78-598 32-562 (606)
11 3j0a_A TOLL-like receptor 5; m 100.0 8.1E-58 2.8E-62 566.4 39.4 523 82-622 8-564 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 5.7E-58 1.9E-62 549.0 35.9 527 82-622 15-562 (606)
13 2z81_A CD282 antigen, TOLL-lik 100.0 4.6E-55 1.6E-59 517.3 28.5 493 65-599 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 2.3E-54 7.9E-59 513.8 34.0 491 102-601 28-538 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 1.4E-53 4.7E-58 507.1 31.8 501 66-575 14-536 (570)
16 4eco_A Uncharacterized protein 100.0 4.6E-54 1.6E-58 515.5 22.0 457 102-595 81-601 (636)
17 2z7x_B TOLL-like receptor 1, v 100.0 7.9E-52 2.7E-56 486.2 27.0 452 82-598 4-485 (520)
18 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-51 3.9E-56 484.8 26.5 455 129-620 3-483 (520)
19 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-51 5.5E-56 487.0 27.4 475 66-574 12-514 (549)
20 4g8a_A TOLL-like receptor 4; l 100.0 2.2E-49 7.4E-54 477.0 38.5 483 103-594 53-580 (635)
21 4ecn_A Leucine-rich repeat pro 100.0 2.7E-50 9.3E-55 490.4 23.0 371 208-599 435-845 (876)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.2E-48 1.4E-52 458.5 29.4 458 102-599 31-515 (562)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.6E-48 1.6E-52 458.2 28.0 458 80-574 33-514 (562)
24 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-47 9.9E-52 458.5 31.9 485 78-571 52-581 (635)
25 1jl5_A Outer protein YOPM; leu 100.0 2.7E-46 9.1E-51 429.0 25.9 423 99-599 8-434 (454)
26 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-46 2E-50 405.8 20.5 294 20-329 1-302 (313)
27 1jl5_A Outer protein YOPM; leu 100.0 3.6E-45 1.2E-49 419.5 24.6 406 124-602 9-419 (454)
28 3v47_A TOLL-like receptor 5B a 100.0 5E-44 1.7E-48 412.5 27.3 364 102-479 30-412 (455)
29 3v47_A TOLL-like receptor 5B a 100.0 1.6E-43 5.5E-48 408.3 31.0 385 177-601 13-415 (455)
30 3bz5_A Internalin-J, INLJ; leu 100.0 2E-42 6.9E-47 397.1 27.8 235 90-352 30-264 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-42 7.3E-47 396.9 27.7 361 165-600 33-393 (457)
32 1o6v_A Internalin A; bacterial 100.0 1.2E-39 4.1E-44 376.7 30.6 344 174-571 46-389 (466)
33 1o6v_A Internalin A; bacterial 100.0 1.2E-39 4.3E-44 376.6 30.6 342 79-451 47-388 (466)
34 2id5_A Lingo-1, leucine rich r 100.0 5.9E-39 2E-43 372.4 23.4 346 249-622 14-360 (477)
35 2id5_A Lingo-1, leucine rich r 100.0 3E-38 1E-42 366.4 27.3 321 177-500 14-334 (477)
36 3o6n_A APL1; leucine-rich repe 100.0 1.4E-37 4.9E-42 350.9 28.6 311 99-451 42-352 (390)
37 3oja_B Anopheles plasmodium-re 100.0 7.3E-37 2.5E-41 364.2 29.2 311 100-476 49-359 (597)
38 3oja_B Anopheles plasmodium-re 100.0 8.7E-37 3E-41 363.6 21.8 335 197-622 50-384 (597)
39 3o6n_A APL1; leucine-rich repe 100.0 1.3E-36 4.5E-41 343.0 21.8 157 196-355 43-199 (390)
40 1ogq_A PGIP-2, polygalacturona 100.0 5.7E-37 1.9E-41 334.7 15.4 259 366-627 50-312 (313)
41 4fcg_A Uncharacterized protein 100.0 1.2E-36 4.2E-41 334.1 15.3 284 20-331 22-314 (328)
42 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-36 4E-41 325.9 14.2 174 712-893 34-211 (311)
43 4fmz_A Internalin; leucine ric 100.0 2E-34 6.8E-39 319.7 26.8 307 121-474 39-345 (347)
44 4fmz_A Internalin; leucine ric 100.0 2.2E-34 7.5E-39 319.4 26.7 308 97-451 39-346 (347)
45 4b9d_A Serine/threonine-protei 100.0 4.8E-36 1.6E-40 326.6 12.3 177 711-894 25-203 (350)
46 3hyh_A Carbon catabolite-derep 100.0 8.8E-36 3E-40 314.8 13.7 174 711-893 14-188 (275)
47 3fpq_A Serine/threonine-protei 100.0 3.4E-35 1.2E-39 313.2 17.1 173 713-893 29-207 (290)
48 4fih_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 323.3 12.8 170 712-893 76-247 (346)
49 4asz_A BDNF/NT-3 growth factor 100.0 2.4E-35 8E-40 316.8 12.0 177 712-894 15-208 (299)
50 3omv_A RAF proto-oncogene seri 100.0 3.5E-35 1.2E-39 315.4 13.1 173 714-897 40-215 (307)
51 4fie_A Serine/threonine-protei 100.0 5.2E-35 1.8E-39 325.8 14.0 172 711-894 152-325 (423)
52 4aoj_A High affinity nerve gro 100.0 6.5E-35 2.2E-39 317.7 14.3 176 713-894 44-238 (329)
53 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-34 3.6E-39 314.6 14.7 167 712-894 60-234 (336)
54 4gt4_A Tyrosine-protein kinase 100.0 2.7E-35 9.4E-40 317.7 9.3 176 713-893 29-224 (308)
55 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-33 1.2E-37 307.8 25.1 288 199-497 34-331 (332)
56 4g31_A Eukaryotic translation 100.0 2.7E-34 9.2E-39 309.1 15.6 176 712-894 7-208 (299)
57 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-33 8.8E-38 308.7 23.9 287 176-473 35-331 (332)
58 1z7x_W Ribonuclease inhibitor; 100.0 2E-37 6.8E-42 357.9 -9.7 255 79-333 4-299 (461)
59 1xku_A Decorin; proteoglycan, 100.0 9.9E-33 3.4E-37 303.8 28.1 295 103-449 32-330 (330)
60 1xku_A Decorin; proteoglycan, 100.0 8.7E-33 3E-37 304.3 27.6 288 175-496 32-329 (330)
61 3ubd_A Ribosomal protein S6 ki 100.0 3.4E-35 1.1E-39 314.7 7.6 174 712-894 26-204 (304)
62 1z7x_W Ribonuclease inhibitor; 100.0 5E-37 1.7E-41 354.6 -9.0 374 198-591 3-440 (461)
63 3hmm_A TGF-beta receptor type- 100.0 2E-33 6.7E-38 303.9 15.1 169 712-891 5-187 (303)
64 2z80_A TOLL-like receptor 2, v 100.0 2.2E-32 7.5E-37 304.0 17.4 283 64-380 28-315 (353)
65 3ogk_B Coronatine-insensitive 100.0 4.2E-35 1.4E-39 349.7 -5.1 430 65-501 41-528 (592)
66 2z66_A Variable lymphocyte rec 100.0 4.4E-32 1.5E-36 295.3 18.5 284 65-364 6-296 (306)
67 4ase_A Vascular endothelial gr 100.0 4.7E-33 1.6E-37 305.6 9.9 180 709-893 63-264 (353)
68 3ogk_B Coronatine-insensitive 100.0 5.2E-34 1.8E-38 340.2 0.4 428 114-566 61-547 (592)
69 3v5w_A G-protein coupled recep 100.0 3.4E-32 1.2E-36 316.3 14.4 170 712-890 191-364 (689)
70 4b99_A Mitogen-activated prote 100.0 1.2E-31 4.1E-36 299.6 14.3 171 711-891 55-237 (398)
71 4f9c_A Cell division cycle 7-r 100.0 3.2E-31 1.1E-35 293.0 14.7 166 710-891 21-221 (361)
72 2z80_A TOLL-like receptor 2, v 100.0 1.5E-30 5.2E-35 289.2 17.9 281 150-479 31-318 (353)
73 4fcg_A Uncharacterized protein 100.0 5.4E-30 1.8E-34 281.2 21.4 288 34-356 22-315 (328)
74 2z66_A Variable lymphocyte rec 100.0 3.2E-30 1.1E-34 280.6 19.3 248 177-452 10-262 (306)
75 1wwl_A Monocyte differentiatio 100.0 1.9E-31 6.3E-36 291.0 9.6 250 121-380 38-310 (312)
76 3uto_A Twitchin; kinase, muscl 100.0 1.2E-30 4.2E-35 306.0 16.7 173 711-893 158-333 (573)
77 1ozn_A Reticulon 4 receptor; N 100.0 2.4E-30 8.2E-35 278.5 17.5 255 81-363 14-269 (285)
78 3zyi_A Leucine-rich repeat-con 100.0 1E-29 3.5E-34 292.3 22.7 244 83-331 59-303 (452)
79 1wwl_A Monocyte differentiatio 100.0 6E-32 2.1E-36 294.9 3.8 249 79-356 44-310 (312)
80 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-29 4.3E-34 272.9 19.4 237 151-388 33-270 (285)
81 3zyj_A Leucine-rich repeat-con 100.0 3.9E-29 1.3E-33 286.4 22.8 244 82-330 47-291 (440)
82 3o53_A Protein LRIM1, AGAP0063 100.0 2.4E-30 8.2E-35 282.9 10.1 269 79-361 11-282 (317)
83 3zyj_A Leucine-rich repeat-con 100.0 1.2E-28 3.9E-33 282.5 23.9 245 104-353 45-290 (440)
84 3o53_A Protein LRIM1, AGAP0063 100.0 1.5E-30 5.1E-35 284.6 7.5 266 298-600 14-282 (317)
85 3zyi_A Leucine-rich repeat-con 100.0 1E-28 3.4E-33 284.1 22.2 228 367-595 76-304 (452)
86 3g06_A SSPH2 (leucine-rich rep 100.0 5.3E-29 1.8E-33 293.9 17.5 292 44-414 11-308 (622)
87 4fr4_A YANK1, serine/threonine 100.0 6E-29 2E-33 277.7 14.5 178 711-896 16-194 (384)
88 2o6q_A Variable lymphocyte rec 100.0 4.5E-28 1.5E-32 258.5 20.4 216 64-307 3-218 (270)
89 3fe3_A MAP/microtubule affinit 100.0 1.3E-28 4.6E-33 269.9 16.1 173 712-893 17-190 (328)
90 1o6l_A RAC-beta serine/threoni 100.0 2.6E-28 8.7E-33 268.5 16.5 173 712-892 7-181 (337)
91 3g06_A SSPH2 (leucine-rich rep 100.0 2.9E-27 1E-31 279.1 26.5 268 174-485 40-307 (622)
92 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.1E-28 7.3E-33 270.9 13.9 174 711-892 24-200 (353)
93 3oja_A Leucine-rich immune mol 100.0 1.1E-28 3.7E-33 285.6 12.0 238 99-350 31-270 (487)
94 4dc2_A Protein kinase C IOTA t 100.0 2.6E-28 8.9E-33 273.4 14.5 173 712-892 54-229 (396)
95 3oja_A Leucine-rich immune mol 100.0 9.5E-29 3.3E-33 286.0 10.3 234 319-589 35-270 (487)
96 2p1m_B Transport inhibitor res 99.9 2.6E-31 8.9E-36 316.9 -12.1 448 65-546 34-544 (594)
97 4aw2_A Serine/threonine-protei 99.9 2.1E-28 7.2E-33 277.9 12.3 172 711-889 75-249 (437)
98 3a8x_A Protein kinase C IOTA t 99.9 8.9E-28 3.1E-32 265.3 16.7 172 712-891 11-185 (345)
99 3h4j_B AMPK kdaid, SNF1-like p 99.9 5.1E-28 1.7E-32 265.8 14.6 173 711-892 10-183 (336)
100 3s95_A LIMK-1, LIM domain kina 99.9 1.2E-27 4E-32 260.8 17.0 173 712-894 12-200 (310)
101 2yab_A Death-associated protei 99.9 7E-28 2.4E-32 267.5 15.4 175 710-892 12-194 (361)
102 3v8s_A RHO-associated protein 99.9 2.6E-28 8.8E-33 275.0 12.0 172 712-892 71-245 (410)
103 1fot_A TPK1 delta, CAMP-depend 99.9 8.6E-28 2.9E-32 262.3 15.5 171 712-892 8-179 (318)
104 3p1a_A MYT1 kinase, membrane-a 99.9 1.4E-27 4.8E-32 260.3 16.8 181 704-893 51-233 (311)
105 2vd5_A DMPK protein; serine/th 99.9 3.5E-28 1.2E-32 274.1 12.4 173 711-890 62-237 (412)
106 4eqm_A Protein kinase; transfe 99.9 1.2E-27 4E-32 258.6 16.0 176 710-893 11-189 (294)
107 2i0e_A Protein kinase C-beta I 99.9 9.3E-28 3.2E-32 265.6 15.4 174 711-892 21-197 (353)
108 2acx_A G protein-coupled recep 99.9 1E-27 3.5E-32 278.6 15.8 174 712-891 186-360 (576)
109 1xjd_A Protein kinase C, theta 99.9 7.4E-28 2.5E-32 265.5 13.9 174 711-892 18-194 (345)
110 1rdq_E PKA C-alpha, CAMP-depen 99.9 1.4E-27 4.7E-32 264.2 15.8 171 712-892 43-214 (350)
111 1tki_A Titin; serine kinase, m 99.9 1.6E-27 5.5E-32 260.8 15.8 171 711-892 6-179 (321)
112 3zgw_A Maternal embryonic leuc 99.9 1E-27 3.4E-32 264.5 14.2 173 710-892 10-185 (347)
113 3fxz_A Serine/threonine-protei 99.9 2E-27 6.8E-32 257.2 16.1 171 711-893 21-193 (297)
114 2bdw_A Hypothetical protein K1 99.9 2.3E-27 7.8E-32 264.0 16.8 177 707-892 26-206 (362)
115 3c0i_A Peripheral plasma membr 99.9 1.9E-27 6.6E-32 263.6 15.7 182 707-892 21-209 (351)
116 2y0a_A Death-associated protei 99.9 2.3E-27 7.9E-32 260.3 16.0 176 709-892 10-193 (326)
117 2r5t_A Serine/threonine-protei 99.9 1.3E-27 4.5E-32 266.3 13.7 173 712-892 40-215 (373)
118 3e7e_A HBUB1, BUB1A, mitotic c 99.9 1.4E-27 4.7E-32 266.6 13.9 173 711-892 66-261 (365)
119 3qd2_B Eukaryotic translation 99.9 4.4E-27 1.5E-31 258.6 17.7 176 711-893 7-253 (332)
120 2y94_A 5'-AMP-activated protei 99.9 1.6E-27 5.4E-32 273.4 14.5 174 711-892 17-191 (476)
121 2c30_A Serine/threonine-protei 99.9 4.5E-27 1.5E-31 257.3 17.3 182 700-893 23-218 (321)
122 3soa_A Calcium/calmodulin-depe 99.9 5.1E-27 1.8E-31 267.4 17.7 176 708-892 9-189 (444)
123 2psq_A Fibroblast growth facto 99.9 2.8E-27 9.6E-32 264.2 14.7 177 711-892 82-281 (370)
124 3c4z_A Rhodopsin kinase; Ser/T 99.9 4.2E-27 1.4E-31 272.9 15.8 176 712-891 187-364 (543)
125 3a62_A Ribosomal protein S6 ki 99.9 4.7E-27 1.6E-31 257.9 15.1 174 711-892 18-197 (327)
126 3niz_A Rhodanese family protei 99.9 5.9E-27 2E-31 255.2 15.4 171 711-890 22-193 (311)
127 1kob_A Twitchin; kinase, intra 99.9 7.7E-27 2.6E-31 261.5 16.5 172 711-892 52-226 (387)
128 2z62_A TOLL-like receptor 4, v 99.9 2.6E-26 8.8E-31 245.7 19.6 217 93-335 21-241 (276)
129 3kul_A Ephrin type-A receptor 99.9 5.9E-27 2E-31 256.9 14.8 174 710-892 49-230 (325)
130 3ork_A Serine/threonine protei 99.9 2.9E-27 9.8E-32 257.8 12.2 175 710-892 12-195 (311)
131 3p86_A Serine/threonine-protei 99.9 4E-27 1.4E-31 256.2 13.2 179 711-894 38-217 (309)
132 3f3z_A Calcium/calmodulin-depe 99.9 1.2E-26 4.1E-31 248.4 16.5 174 709-893 8-185 (277)
133 3uim_A Brassinosteroid insensi 99.9 2E-27 6.9E-32 260.9 10.6 184 706-892 26-211 (326)
134 4ejn_A RAC-alpha serine/threon 99.9 2.6E-27 9E-32 271.5 11.7 174 711-892 149-325 (446)
135 2x4f_A Myosin light chain kina 99.9 9.8E-27 3.4E-31 259.8 16.0 168 715-892 94-264 (373)
136 2qkw_B Protein kinase; three-h 99.9 8.3E-27 2.8E-31 255.4 14.8 174 712-892 41-217 (321)
137 2p1m_B Transport inhibitor res 99.9 2.9E-29 1E-33 299.2 -5.4 392 78-474 66-518 (594)
138 3soc_A Activin receptor type-2 99.9 9.8E-27 3.4E-31 254.9 14.8 170 711-891 25-208 (322)
139 1u5q_A Serine/threonine protei 99.9 1.1E-26 3.6E-31 257.1 14.9 170 710-890 54-224 (348)
140 2vuw_A Serine/threonine-protei 99.9 5.1E-28 1.7E-32 266.9 4.3 169 710-892 20-253 (336)
141 4euu_A Serine/threonine-protei 99.9 1.6E-26 5.5E-31 252.9 16.1 173 710-889 9-188 (319)
142 2z62_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 242.7 20.2 207 152-359 30-241 (276)
143 3tki_A Serine/threonine-protei 99.9 6.2E-27 2.1E-31 256.5 12.5 171 711-891 8-182 (323)
144 3nyv_A Calmodulin-domain prote 99.9 5E-27 1.7E-31 272.4 12.3 179 707-893 23-205 (484)
145 3is5_A Calcium-dependent prote 99.9 8.5E-27 2.9E-31 250.7 12.9 176 710-891 22-201 (285)
146 3uc3_A Serine/threonine-protei 99.9 5.5E-27 1.9E-31 260.9 11.7 170 711-892 21-193 (361)
147 3sxs_A Cytoplasmic tyrosine-pr 99.9 5.6E-27 1.9E-31 249.7 11.0 171 710-891 8-180 (268)
148 2zv2_A Calcium/calmodulin-depe 99.9 8E-27 2.7E-31 252.7 12.4 173 711-892 14-213 (298)
149 1ob3_A PFPK5, cell division co 99.9 6.9E-27 2.3E-31 251.9 11.8 171 712-891 4-175 (288)
150 2a2a_A Death-associated protei 99.9 2.2E-26 7.5E-31 252.0 15.5 176 709-892 11-194 (321)
151 2rku_A Serine/threonine-protei 99.9 5.2E-26 1.8E-30 245.7 18.2 174 711-892 16-191 (294)
152 2qol_A Ephrin receptor; recept 99.9 1E-26 3.5E-31 259.8 13.1 174 710-892 45-226 (373)
153 2eue_A Carbon catabolite derep 99.9 1.5E-26 5.1E-31 247.4 13.7 172 712-892 15-187 (275)
154 2owb_A Serine/threonine-protei 99.9 4.2E-26 1.4E-30 251.3 17.6 174 711-892 42-217 (335)
155 3dls_A PAS domain-containing s 99.9 7.4E-27 2.5E-31 257.1 11.5 176 709-892 23-205 (335)
156 2nru_A Interleukin-1 receptor- 99.9 5.2E-26 1.8E-30 247.4 17.8 186 700-891 13-210 (307)
157 3gni_B Strad alpha; kinase fol 99.9 3.2E-26 1.1E-30 257.8 16.7 174 711-891 26-210 (389)
158 3lij_A Calcium/calmodulin depe 99.9 2.2E-26 7.6E-31 267.3 15.9 176 709-893 36-215 (494)
159 4hcu_A Tyrosine-protein kinase 99.9 8.3E-27 2.8E-31 248.5 11.2 171 711-892 11-183 (269)
160 3o0g_A Cell division protein k 99.9 2.2E-26 7.5E-31 248.4 14.6 171 712-891 4-176 (292)
161 3mwu_A Calmodulin-domain prote 99.9 1.3E-26 4.3E-31 269.0 13.6 176 708-892 20-199 (486)
162 3cok_A Serine/threonine-protei 99.9 2E-26 7E-31 246.7 14.0 174 712-892 13-188 (278)
163 3pfq_A PKC-B, PKC-beta, protei 99.9 1.9E-26 6.3E-31 276.5 15.1 173 712-892 343-518 (674)
164 2y7j_A Phosphorylase B kinase 99.9 6.3E-26 2.1E-30 252.8 18.1 176 708-891 92-274 (365)
165 2w4o_A Calcium/calmodulin-depe 99.9 1.6E-26 5.4E-31 256.1 13.0 169 711-892 54-226 (349)
166 3kk8_A Calcium/calmodulin depe 99.9 6.3E-26 2.2E-30 243.6 17.3 173 711-892 7-183 (284)
167 3ugc_A Tyrosine-protein kinase 99.9 6E-27 2.1E-31 253.2 9.3 174 709-892 9-193 (295)
168 3cbl_A C-FES, proto-oncogene t 99.9 1.2E-26 4E-31 260.0 11.8 171 712-891 116-290 (377)
169 3q5i_A Protein kinase; CDPK, m 99.9 3.1E-26 1.1E-30 266.8 15.8 176 710-893 36-225 (504)
170 2h6d_A 5'-AMP-activated protei 99.9 3.7E-26 1.3E-30 244.4 15.0 174 711-892 12-186 (276)
171 3bhy_A Death-associated protei 99.9 4.7E-26 1.6E-30 244.5 15.9 177 708-892 3-187 (283)
172 3rp9_A Mitogen-activated prote 99.9 1.6E-26 5.5E-31 266.1 13.0 169 711-889 54-256 (458)
173 1nxk_A MAP kinase-activated pr 99.9 2.1E-26 7.1E-31 259.7 13.6 168 711-892 63-239 (400)
174 2pmi_A Negative RE, cyclin-dep 99.9 3E-26 1E-30 250.5 14.4 175 711-891 6-183 (317)
175 3lb7_A RAF proto-oncogene seri 99.9 1.7E-26 5.7E-31 251.1 12.3 176 710-896 36-214 (307)
176 3i6u_A CDS1, serine/threonine- 99.9 7.5E-27 2.6E-31 265.2 9.8 175 707-890 132-315 (419)
177 3tt0_A Basic fibroblast growth 99.9 2.8E-26 9.4E-31 257.5 14.2 178 710-892 69-269 (382)
178 3kn6_A Ribosomal protein S6 ki 99.9 3.8E-26 1.3E-30 250.4 14.9 164 715-892 16-185 (325)
179 3llt_A Serine/threonine kinase 99.9 3.1E-26 1.1E-30 255.1 14.4 182 699-893 24-236 (360)
180 3n9x_A Phosphotransferase; mal 99.9 3.6E-26 1.2E-30 260.8 15.1 169 711-889 27-224 (432)
181 3ttj_A Mitogen-activated prote 99.9 2.5E-26 8.5E-31 263.9 13.6 170 711-892 63-239 (464)
182 1luf_A Muscle-specific tyrosin 99.9 2E-26 6.7E-31 254.8 12.3 177 711-892 48-252 (343)
183 3fdn_A Serine/threonine-protei 99.9 4.9E-26 1.7E-30 243.9 14.9 173 712-893 11-184 (279)
184 3q4u_A Activin receptor type-1 99.9 3.9E-26 1.3E-30 247.5 13.8 167 710-892 8-193 (301)
185 2ivs_A Proto-oncogene tyrosine 99.9 3.4E-26 1.2E-30 249.5 13.4 177 710-891 23-227 (314)
186 3hko_A Calcium/calmodulin-depe 99.9 3.3E-26 1.1E-30 253.3 13.4 179 709-890 25-248 (345)
187 2h34_A Serine/threonine-protei 99.9 7.8E-26 2.7E-30 246.2 16.1 174 711-892 35-211 (309)
188 2a19_B Interferon-induced, dou 99.9 6E-26 2.1E-30 243.7 15.0 176 704-892 5-197 (284)
189 3l9p_A Anaplastic lymphoma kin 99.9 2.6E-26 8.8E-31 256.2 12.5 177 711-892 72-262 (367)
190 3rfs_A Internalin B, repeat mo 99.9 7.8E-26 2.7E-30 241.3 15.7 188 146-342 59-246 (272)
191 3oz6_A Mitogen-activated prote 99.9 4.5E-26 1.5E-30 256.5 14.3 172 708-890 7-204 (388)
192 3lm5_A Serine/threonine-protei 99.9 3.8E-26 1.3E-30 250.8 13.1 188 699-893 17-210 (327)
193 4eut_A Serine/threonine-protei 99.9 4.1E-26 1.4E-30 257.4 13.6 174 710-890 9-189 (396)
194 4agu_A Cyclin-dependent kinase 99.9 7.3E-26 2.5E-30 246.7 15.2 171 711-890 4-176 (311)
195 4e5w_A Tyrosine-protein kinase 99.9 3.8E-26 1.3E-30 247.7 12.8 173 710-891 21-204 (302)
196 3gen_A Tyrosine-protein kinase 99.9 1.9E-26 6.4E-31 247.7 10.1 171 711-892 25-197 (283)
197 3mdy_A Bone morphogenetic prot 99.9 1.1E-25 3.8E-30 248.0 16.5 178 704-894 31-224 (337)
198 1x8b_A WEE1HU, WEE1-like prote 99.9 1.5E-25 5.2E-30 240.9 17.0 175 709-891 10-205 (289)
199 3vhe_A Vascular endothelial gr 99.9 2.2E-26 7.6E-31 256.2 10.7 178 710-892 22-271 (359)
200 3rfs_A Internalin B, repeat mo 99.9 1.1E-25 3.9E-30 240.1 15.6 187 170-365 59-245 (272)
201 4azs_A Methyltransferase WBDD; 99.9 1.9E-26 6.4E-31 270.5 10.2 166 718-894 242-417 (569)
202 3g33_A Cell division protein k 99.9 3.6E-26 1.2E-30 248.8 11.7 180 706-892 5-195 (308)
203 3og7_A AKAP9-BRAF fusion prote 99.9 1.5E-26 5E-31 249.4 8.4 180 706-896 20-202 (289)
204 2izr_A Casein kinase I isoform 99.9 3.1E-26 1.1E-30 251.9 11.1 170 711-893 10-194 (330)
205 3dtc_A Mitogen-activated prote 99.9 5.8E-26 2E-30 242.1 12.7 174 711-892 8-190 (271)
206 2qr7_A Ribosomal protein S6 ki 99.9 9E-26 3.1E-30 248.9 14.5 168 709-891 21-195 (342)
207 2vgo_A Serine/threonine-protei 99.9 1.2E-25 4.1E-30 241.6 15.1 173 711-892 15-188 (284)
208 3qup_A Tyrosine-protein kinase 99.9 5E-26 1.7E-30 249.4 12.1 179 710-892 23-215 (323)
209 2o6q_A Variable lymphocyte rec 99.9 1.1E-24 3.7E-29 232.2 22.0 205 127-334 17-221 (270)
210 1t46_A HOMO sapiens V-KIT hard 99.9 5.6E-26 1.9E-30 247.7 12.2 177 711-892 24-223 (313)
211 2ycf_A Serine/threonine-protei 99.9 4.4E-26 1.5E-30 249.7 11.4 174 707-889 7-189 (322)
212 3byv_A Rhoptry kinase; malaria 99.9 2.2E-26 7.7E-31 257.8 9.0 173 712-891 75-277 (377)
213 2zmd_A Dual specificity protei 99.9 8.3E-26 2.8E-30 254.0 13.7 169 711-890 57-230 (390)
214 3m19_A Variable lymphocyte rec 99.9 3.8E-25 1.3E-29 233.0 17.8 192 64-261 3-194 (251)
215 1phk_A Phosphorylase kinase; g 99.9 2.7E-25 9.4E-30 240.5 17.1 172 711-890 18-197 (298)
216 1k9a_A Carboxyl-terminal SRC k 99.9 1.3E-25 4.5E-30 257.4 15.2 167 712-892 195-362 (450)
217 1rjb_A FL cytokine receptor; k 99.9 1.1E-25 3.7E-30 249.0 13.9 177 710-891 45-249 (344)
218 3dbq_A Dual specificity protei 99.9 6.9E-26 2.4E-30 250.5 12.3 169 711-890 10-183 (343)
219 1t4h_A Serine/threonine-protei 99.9 3.6E-25 1.2E-29 238.6 17.6 173 712-892 28-206 (290)
220 3lxl_A Tyrosine-protein kinase 99.9 1.9E-25 6.7E-30 245.2 15.5 171 711-891 24-205 (327)
221 1mp8_A Focal adhesion kinase 1 99.9 1.1E-25 3.9E-30 241.3 13.4 173 710-892 15-193 (281)
222 2wqm_A Serine/threonine-protei 99.9 1.5E-25 5.1E-30 244.1 14.2 178 711-892 33-212 (310)
223 1vzo_A Ribosomal protein S6 ki 99.9 2E-26 7E-31 255.8 7.5 173 711-891 55-235 (355)
224 2pvf_A Fibroblast growth facto 99.9 1.2E-25 4.1E-30 247.6 13.6 177 710-891 35-234 (334)
225 1qcf_A Haematopoetic cell kina 99.9 6E-26 2E-30 260.7 11.3 169 712-891 190-360 (454)
226 3goz_A Leucine-rich repeat-con 99.9 8.1E-27 2.8E-31 259.9 3.8 257 82-338 2-304 (362)
227 3op5_A Serine/threonine-protei 99.9 9.3E-26 3.2E-30 251.6 12.3 175 711-893 36-238 (364)
228 4fvq_A Tyrosine-protein kinase 99.9 3.9E-26 1.3E-30 246.0 8.9 168 710-890 8-191 (289)
229 2ast_B S-phase kinase-associat 99.9 1.4E-26 4.6E-31 255.4 5.4 267 65-363 36-314 (336)
230 3eb0_A Putative uncharacterize 99.9 1.1E-25 3.6E-30 252.9 12.6 170 710-891 7-216 (383)
231 3fme_A Dual specificity mitoge 99.9 7.1E-26 2.4E-30 244.0 10.7 173 711-889 8-182 (290)
232 3eqc_A Dual specificity mitoge 99.9 8E-26 2.7E-30 251.8 11.1 173 709-892 32-206 (360)
233 1zy4_A Serine/threonine-protei 99.9 3.6E-25 1.2E-29 239.9 15.9 171 710-891 6-205 (303)
234 2xrw_A Mitogen-activated prote 99.9 2.2E-25 7.6E-30 249.1 14.6 170 711-892 26-202 (371)
235 2jam_A Calcium/calmodulin-depe 99.9 3.3E-25 1.1E-29 240.6 15.5 172 709-892 8-183 (304)
236 3kmu_A ILK, integrin-linked ki 99.9 1.8E-25 6.3E-30 238.0 13.2 174 711-894 11-186 (271)
237 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.1E-25 3.6E-30 247.5 11.5 172 710-891 34-212 (329)
238 2yex_A Serine/threonine-protei 99.9 4E-25 1.4E-29 236.2 15.6 172 710-891 7-182 (276)
239 1opk_A P150, C-ABL, proto-onco 99.9 4.5E-26 1.5E-30 264.3 8.9 170 712-891 222-394 (495)
240 2buj_A Serine/threonine-protei 99.9 1.9E-25 6.6E-30 244.0 13.3 175 711-892 30-219 (317)
241 4e7w_A Glycogen synthase kinas 99.9 1.5E-25 5E-30 252.5 12.7 169 711-891 41-216 (394)
242 3mtl_A Cell division protein k 99.9 9.6E-26 3.3E-30 247.2 10.8 169 712-890 4-174 (324)
243 1b6c_B TGF-B superfamily recep 99.9 4.8E-25 1.6E-29 243.6 16.3 174 702-891 34-226 (342)
244 3t9t_A Tyrosine-protein kinase 99.9 1.6E-25 5.3E-30 238.2 11.9 171 711-892 9-181 (267)
245 1p4o_A Insulin-like growth fac 99.9 1.6E-25 5.4E-30 245.2 12.3 178 710-892 25-216 (322)
246 1cm8_A Phosphorylated MAP kina 99.9 1.7E-25 5.8E-30 249.5 12.7 167 711-890 26-199 (367)
247 4f0f_A Serine/threonine-protei 99.9 3E-25 1E-29 238.8 14.2 171 711-890 20-200 (287)
248 3gxj_A TGF-beta receptor type- 99.9 3.1E-26 1.1E-30 248.4 6.4 166 710-891 3-187 (303)
249 1ua2_A CAK, cell division prot 99.9 1.4E-25 4.9E-30 248.2 11.8 174 710-891 10-187 (346)
250 1csn_A Casein kinase-1; phosph 99.9 1.5E-25 5.1E-30 242.5 11.7 170 710-892 10-194 (298)
251 2i1m_A Macrophage colony-stimu 99.9 8E-26 2.7E-30 248.9 9.7 177 710-891 46-241 (333)
252 2ac3_A MAP kinase-interacting 99.9 2E-25 6.8E-30 243.8 12.7 165 715-890 18-195 (316)
253 3kfa_A Tyrosine-protein kinase 99.9 6.2E-26 2.1E-30 244.3 8.6 173 710-892 13-188 (288)
254 3f66_A Hepatocyte growth facto 99.9 3.2E-25 1.1E-29 240.0 14.1 172 712-892 27-208 (298)
255 1p9a_G Platelet glycoprotein I 99.9 1.5E-24 5.2E-29 233.3 19.2 161 167-331 48-208 (290)
256 3lxp_A Non-receptor tyrosine-p 99.9 6.6E-25 2.3E-29 239.9 16.6 168 713-891 34-212 (318)
257 3poz_A Epidermal growth factor 99.9 1.3E-25 4.4E-30 246.5 11.0 173 711-893 16-196 (327)
258 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 7.7E-26 2.6E-30 259.5 9.4 169 712-891 186-356 (452)
259 4glp_A Monocyte differentiatio 99.9 6.9E-25 2.4E-29 238.8 16.5 224 102-331 64-307 (310)
260 1j1b_A Glycogen synthase kinas 99.9 2.4E-25 8.2E-30 252.9 13.1 168 712-891 56-231 (420)
261 3g2f_A Bone morphogenetic prot 99.9 2.9E-25 9.7E-30 244.8 13.2 169 712-891 15-203 (336)
262 4aaa_A Cyclin-dependent kinase 99.9 2.5E-25 8.5E-30 244.8 12.7 172 711-891 26-199 (331)
263 2wei_A Calmodulin-domain prote 99.9 3.7E-25 1.3E-29 238.2 13.8 178 706-892 18-199 (287)
264 3q60_A ROP5B; pseudokinase, tr 99.9 1.8E-25 6.2E-30 249.9 11.8 168 712-890 64-265 (371)
265 3c1x_A Hepatocyte growth facto 99.9 1E-25 3.5E-30 251.5 9.7 172 712-892 91-272 (373)
266 2eva_A TAK1 kinase - TAB1 chim 99.9 2.3E-25 8E-30 242.2 12.3 169 712-892 10-179 (307)
267 1p9a_G Platelet glycoprotein I 99.9 2.1E-24 7.2E-29 232.1 19.6 204 97-307 5-208 (290)
268 1mqb_A Ephrin type-A receptor 99.9 4.3E-25 1.5E-29 243.0 14.5 173 711-892 45-226 (333)
269 3pg1_A Mitogen-activated prote 99.9 2.7E-25 9.3E-30 247.7 13.0 173 710-890 22-207 (362)
270 2xwt_C Thyrotropin receptor; s 99.9 9.1E-25 3.1E-29 228.3 16.0 203 93-328 25-236 (239)
271 3mi9_A Cell division protein k 99.9 2.2E-25 7.6E-30 247.3 11.8 172 711-891 18-203 (351)
272 3a7i_A MST3 kinase, serine/thr 99.9 5.7E-25 1.9E-29 238.7 14.7 172 711-893 23-196 (303)
273 1fvr_A Tyrosine-protein kinase 99.9 3.8E-25 1.3E-29 242.9 13.3 176 711-891 26-216 (327)
274 3an0_A Dual specificity mitoge 99.9 2E-25 6.9E-30 246.4 11.2 173 712-891 53-228 (340)
275 1qpc_A LCK kinase; alpha beta 99.9 3.2E-25 1.1E-29 237.5 12.3 170 711-891 14-185 (279)
276 3rgf_A Cyclin-dependent kinase 99.9 2.5E-25 8.6E-30 251.8 12.1 169 714-891 25-210 (405)
277 1u59_A Tyrosine-protein kinase 99.9 6.1E-25 2.1E-29 236.4 14.1 168 714-891 14-188 (287)
278 3pls_A Macrophage-stimulating 99.9 6.3E-25 2.2E-29 237.5 14.1 173 712-893 23-205 (298)
279 3goz_A Leucine-rich repeat-con 99.9 3E-26 1E-30 255.3 3.7 261 202-482 2-304 (362)
280 3nsz_A CK II alpha, casein kin 99.9 1E-24 3.6E-29 239.6 15.8 163 711-890 37-204 (330)
281 2clq_A Mitogen-activated prote 99.9 6.7E-25 2.3E-29 237.0 13.6 169 715-891 27-198 (295)
282 3brb_A Proto-oncogene tyrosine 99.9 7E-25 2.4E-29 239.1 13.8 179 710-892 34-225 (313)
283 3kex_A Receptor tyrosine-prote 99.9 1.7E-25 5.7E-30 245.4 8.8 172 712-893 15-194 (325)
284 3com_A Serine/threonine-protei 99.9 1E-24 3.5E-29 237.9 14.8 173 708-892 27-201 (314)
285 2wtk_C Serine/threonine-protei 99.9 1.1E-24 3.8E-29 236.5 14.8 174 711-891 6-186 (305)
286 2xir_A Vascular endothelial gr 99.9 6.4E-25 2.2E-29 239.7 12.9 177 710-891 27-225 (316)
287 2pml_X PFPK7, Ser/Thr protein 99.9 2.3E-25 7.7E-30 246.9 9.3 173 711-891 32-225 (348)
288 2w1i_A JAK2; chromosomal rearr 99.9 6.2E-25 2.1E-29 241.0 12.4 171 711-891 42-223 (326)
289 4fl3_A Tyrosine-protein kinase 99.9 3.3E-25 1.1E-29 263.8 10.9 168 715-892 374-548 (635)
290 2w5a_A Serine/threonine-protei 99.9 4.1E-25 1.4E-29 236.7 10.5 179 711-891 7-191 (279)
291 3cc6_A Protein tyrosine kinase 99.9 9E-25 3.1E-29 234.3 13.0 172 711-892 13-190 (281)
292 2v62_A Serine/threonine-protei 99.9 4.5E-25 1.5E-29 244.2 10.9 174 710-892 37-236 (345)
293 1xbb_A Tyrosine-protein kinase 99.9 1.4E-24 4.8E-29 234.1 14.4 170 712-891 18-195 (291)
294 2h8h_A Proto-oncogene tyrosine 99.9 1.7E-25 5.9E-30 261.8 7.8 169 712-891 269-439 (535)
295 3kvw_A DYRK2, dual specificity 99.9 1.7E-24 6E-29 246.3 15.8 171 709-892 96-275 (429)
296 2r3i_A Cell division protein k 99.9 1E-24 3.5E-29 236.1 12.7 172 712-891 5-178 (299)
297 3qyz_A Mitogen-activated prote 99.9 1.5E-24 5E-29 241.9 14.4 169 711-891 28-206 (364)
298 3aln_A Dual specificity mitoge 99.9 2.4E-24 8.1E-29 236.5 15.7 172 712-889 24-198 (327)
299 2ozo_A Tyrosine-protein kinase 99.9 5.7E-25 1.9E-29 261.1 11.5 167 716-892 342-515 (613)
300 2ca6_A RAN GTPase-activating p 99.9 2.6E-26 8.8E-31 258.3 -0.3 242 93-334 23-319 (386)
301 3ll6_A Cyclin G-associated kin 99.9 9E-25 3.1E-29 240.6 12.0 173 711-890 29-224 (337)
302 1u46_A ACK-1, activated CDC42 99.9 1.1E-24 3.8E-29 234.8 12.3 173 711-891 19-199 (291)
303 2fst_X Mitogen-activated prote 99.9 4.8E-25 1.6E-29 245.6 9.7 167 711-890 30-203 (367)
304 2pzi_A Probable serine/threoni 99.9 5.3E-25 1.8E-29 265.6 10.8 168 709-892 79-253 (681)
305 1z57_A Dual specificity protei 99.9 1.4E-24 4.8E-29 239.2 13.3 175 705-892 9-210 (339)
306 1wak_A Serine/threonine-protei 99.9 8.1E-25 2.8E-29 246.9 11.6 178 702-892 29-269 (397)
307 2vwi_A Serine/threonine-protei 99.9 5.8E-25 2E-29 238.4 9.6 175 711-890 16-200 (303)
308 2yfx_A Tyrosine-protein kinase 99.9 6.1E-25 2.1E-29 241.2 9.8 178 710-892 30-221 (327)
309 2j7t_A Serine/threonine-protei 99.9 6.3E-25 2.1E-29 238.1 9.6 169 711-889 20-190 (302)
310 1byg_A CSK, protein (C-termina 99.9 1.2E-24 4.1E-29 232.9 11.6 167 711-891 22-189 (278)
311 4glp_A Monocyte differentiatio 99.9 6.3E-25 2.1E-29 239.1 8.8 224 79-308 65-308 (310)
312 3lzb_A Epidermal growth factor 99.9 1.4E-24 4.9E-29 238.1 11.7 173 711-893 16-196 (327)
313 1blx_A Cyclin-dependent kinase 99.9 1E-24 3.5E-29 239.2 10.5 174 711-892 12-195 (326)
314 2b9h_A MAP kinase FUS3, mitoge 99.9 4.3E-24 1.5E-28 237.1 14.9 168 711-890 12-196 (353)
315 2ca6_A RAN GTPase-activating p 99.9 1.5E-25 5.1E-30 252.1 2.9 241 117-357 23-318 (386)
316 4exu_A Mitogen-activated prote 99.9 2.3E-24 8E-29 240.8 12.4 166 711-890 43-215 (371)
317 3p23_A Serine/threonine-protei 99.9 1.4E-24 4.7E-29 247.0 10.5 166 712-891 26-201 (432)
318 2rio_A Serine/threonine-protei 99.9 1.2E-24 4E-29 248.3 9.9 170 711-890 16-206 (434)
319 2jii_A Serine/threonine-protei 99.9 6.4E-25 2.2E-29 243.6 7.5 167 711-892 43-244 (352)
320 2x7f_A TRAF2 and NCK-interacti 99.9 2.3E-24 7.9E-29 236.4 11.6 170 711-890 25-203 (326)
321 4hgt_A Casein kinase I isoform 99.9 2.3E-24 7.8E-29 232.8 11.3 171 710-893 9-192 (296)
322 2xwt_C Thyrotropin receptor; s 99.9 8.4E-24 2.9E-28 221.0 15.2 196 152-353 33-237 (239)
323 3uzp_A CKI-delta, CKID, casein 99.9 5E-24 1.7E-28 230.2 13.4 170 711-893 10-192 (296)
324 3m19_A Variable lymphocyte rec 99.9 1.4E-23 4.7E-28 221.1 15.7 180 416-598 16-196 (251)
325 2iwi_A Serine/threonine-protei 99.9 1.5E-24 5.2E-29 236.3 8.6 179 704-891 25-213 (312)
326 2j0j_A Focal adhesion kinase 1 99.9 5E-24 1.7E-28 254.6 13.8 172 710-891 390-567 (656)
327 3sv0_A Casein kinase I-like; t 99.9 6.7E-24 2.3E-28 243.7 14.1 171 710-893 7-190 (483)
328 3cek_A Dual specificity protei 99.9 5.5E-24 1.9E-28 232.0 12.7 170 710-890 28-202 (313)
329 2i6l_A Mitogen-activated prote 99.9 6.8E-24 2.3E-28 231.8 12.9 167 711-890 12-198 (320)
330 3en9_A Glycoprotease, O-sialog 99.9 2.1E-24 7.1E-29 251.8 9.2 159 713-890 339-510 (540)
331 3coi_A Mitogen-activated prote 99.9 4.3E-24 1.5E-28 237.1 11.2 166 711-890 25-197 (353)
332 3e3p_A Protein kinase, putativ 99.9 2.3E-24 7.8E-29 240.0 9.0 173 710-891 23-206 (360)
333 2ast_B S-phase kinase-associat 99.9 3.1E-25 1.1E-29 244.5 1.8 252 128-387 49-314 (336)
334 2vx3_A Dual specificity tyrosi 99.9 1.6E-23 5.5E-28 235.0 15.5 172 710-892 54-234 (382)
335 3fhr_A MAP kinase-activated pr 99.9 1.2E-23 4E-28 231.8 13.8 163 715-891 34-204 (336)
336 3qa8_A MGC80376 protein; kinas 99.9 3.7E-24 1.3E-28 251.0 10.2 176 710-892 14-199 (676)
337 2dyl_A Dual specificity mitoge 99.9 1.4E-23 4.8E-28 229.2 13.5 170 712-890 27-198 (318)
338 3a99_A Proto-oncogene serine/t 99.9 1.3E-24 4.4E-29 237.8 5.1 175 708-891 41-223 (320)
339 2eu9_A Dual specificity protei 99.9 1.1E-23 3.7E-28 233.8 12.6 174 706-892 15-215 (355)
340 3cvr_A Invasion plasmid antige 99.9 5.9E-24 2E-28 247.7 10.2 195 67-291 49-251 (571)
341 1q8y_A SR protein kinase; tran 99.9 1.5E-23 5.2E-28 234.4 12.0 170 710-892 19-211 (373)
342 4ay9_X Follicle-stimulating ho 99.9 4.7E-23 1.6E-27 228.2 15.2 202 66-283 9-215 (350)
343 1h6u_A Internalin H; cell adhe 99.9 6.7E-23 2.3E-27 222.6 15.9 193 99-307 38-230 (308)
344 2y4i_B KSR2, HKSR2, kinase sup 99.9 2.2E-24 7.5E-29 235.8 3.9 169 712-891 35-209 (319)
345 2o6s_A Variable lymphocyte rec 99.9 7.8E-23 2.7E-27 208.8 15.0 157 64-235 5-161 (208)
346 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4E-27 220.7 16.6 195 122-356 37-231 (308)
347 3uqc_A Probable conserved tran 99.9 6.7E-23 2.3E-27 220.1 12.2 154 702-865 22-177 (286)
348 4ay9_X Follicle-stimulating ho 99.9 6.6E-22 2.3E-26 219.0 17.4 240 105-352 12-256 (350)
349 3dzo_A Rhoptry kinase domain; 99.9 2.2E-22 7.4E-27 227.9 10.9 169 714-889 82-280 (413)
350 3cvr_A Invasion plasmid antige 99.9 1.2E-21 4.1E-26 228.3 17.1 189 127-343 60-255 (571)
351 2o6s_A Variable lymphocyte rec 99.9 1.8E-21 6.1E-26 198.7 15.5 152 105-259 10-161 (208)
352 3m2w_A MAP kinase-activated pr 99.9 9.2E-22 3.2E-26 212.9 11.3 150 706-869 14-172 (299)
353 4b8c_D Glucose-repressible alc 99.8 1.6E-22 5.4E-27 244.5 3.9 221 21-263 128-358 (727)
354 1zar_A RIO2 kinase; serine kin 99.8 1.7E-21 5.9E-26 208.1 9.1 146 713-890 93-253 (282)
355 1dce_A Protein (RAB geranylger 99.8 3.7E-23 1.3E-27 242.4 -5.9 216 99-348 346-566 (567)
356 3e6j_A Variable lymphocyte rec 99.8 6.6E-20 2.3E-24 189.9 16.5 157 64-260 17-173 (229)
357 1h6t_A Internalin B; cell adhe 99.8 3.1E-20 1E-24 199.8 14.3 172 99-308 43-214 (291)
358 1m9s_A Internalin B; cell inva 99.8 5.3E-20 1.8E-24 216.9 16.9 170 124-307 41-210 (605)
359 1h6t_A Internalin B; cell adhe 99.8 3.7E-20 1.3E-24 199.1 14.0 188 131-334 29-216 (291)
360 1m9s_A Internalin B; cell inva 99.8 3.1E-20 1.1E-24 218.8 14.6 173 171-357 40-212 (605)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-19 5.9E-24 185.4 16.8 152 82-236 15-167 (220)
362 2v9t_B SLIT homolog 2 protein 99.8 1.1E-19 3.6E-24 187.0 15.1 149 84-259 17-165 (220)
363 2xot_A Amphoterin-induced prot 99.8 1.7E-19 5.7E-24 200.5 16.3 176 177-355 21-202 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.2E-24 184.0 15.5 156 177-335 14-170 (220)
365 1dce_A Protein (RAB geranylger 99.8 5.5E-22 1.9E-26 232.5 -5.6 202 149-373 348-567 (567)
366 2xot_A Amphoterin-induced prot 99.8 9.6E-20 3.3E-24 202.4 12.7 174 82-282 22-201 (361)
367 2v9t_B SLIT homolog 2 protein 99.8 3.6E-19 1.2E-23 183.1 15.4 152 177-331 14-165 (220)
368 3e6j_A Variable lymphocyte rec 99.8 2.3E-18 7.9E-23 178.2 18.7 156 176-335 21-176 (229)
369 1xeu_A Internalin C; cellular 99.8 2.1E-19 7.1E-24 190.2 9.8 167 150-331 19-185 (263)
370 4b8c_D Glucose-repressible alc 99.8 3.8E-20 1.3E-24 223.7 4.5 200 372-598 207-408 (727)
371 1xeu_A Internalin C; cellular 99.8 2.5E-19 8.6E-24 189.6 9.0 151 146-309 37-187 (263)
372 4ezg_A Putative uncharacterize 99.8 1.6E-18 5.5E-23 175.0 13.2 152 171-330 41-193 (197)
373 4ezg_A Putative uncharacterize 99.8 1.7E-18 5.7E-23 174.8 12.1 132 170-307 62-194 (197)
374 1w8a_A SLIT protein; signaling 99.7 1.1E-17 3.6E-22 168.1 13.1 132 417-574 11-143 (192)
375 1zth_A RIO1 serine protein kin 99.7 6.3E-18 2.2E-22 178.2 11.8 140 713-869 50-221 (258)
376 3sb4_A Hypothetical leucine ri 99.7 1.6E-18 5.4E-23 190.1 7.3 292 92-396 13-327 (329)
377 3sb4_A Hypothetical leucine ri 99.7 6.7E-18 2.3E-22 185.1 10.0 103 365-469 225-328 (329)
378 1w8a_A SLIT protein; signaling 99.7 3.6E-17 1.2E-21 164.2 13.5 131 177-334 11-142 (192)
379 2ell_A Acidic leucine-rich nuc 99.7 6.5E-17 2.2E-21 158.6 11.3 133 101-235 23-160 (168)
380 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 156.9 11.5 131 175-307 25-160 (168)
381 2o6r_A Variable lymphocyte rec 99.7 3.4E-16 1.2E-20 154.9 13.2 132 65-211 6-137 (177)
382 2je0_A Acidic leucine-rich nuc 99.7 1E-16 3.6E-21 153.7 7.9 109 102-212 17-127 (149)
383 2je0_A Acidic leucine-rich nuc 99.6 1.7E-16 5.8E-21 152.2 8.3 126 174-301 17-147 (149)
384 2wfh_A SLIT homolog 2 protein 99.6 1.2E-15 4.3E-20 153.0 14.0 108 223-331 32-139 (193)
385 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.3E-20 153.0 13.8 128 177-308 13-140 (193)
386 4fdw_A Leucine rich hypothetic 99.6 5.8E-15 2E-19 165.3 20.1 264 101-401 112-381 (401)
387 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.6E-20 150.0 13.3 132 201-335 10-141 (177)
388 4fdw_A Leucine rich hypothetic 99.6 9.2E-15 3.1E-19 163.7 20.2 253 90-354 124-382 (401)
389 1ds9_A Outer arm dynein; leuci 99.6 1.9E-17 6.6E-22 167.2 -5.6 127 169-300 43-180 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 2.9E-17 9.8E-22 165.9 -4.4 154 171-331 15-185 (198)
391 4gyi_A RIO2 kinase; protein ki 99.6 2.4E-15 8.2E-20 164.4 8.9 139 712-868 97-266 (397)
392 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-15 1.1E-19 147.8 8.1 111 96-211 13-126 (176)
393 4fs7_A Uncharacterized protein 99.6 1.4E-13 4.9E-18 154.5 21.8 330 95-467 64-393 (394)
394 1a9n_A U2A', U2A'; complex (nu 99.5 6.4E-15 2.2E-19 145.6 8.3 130 195-330 16-152 (176)
395 4fs7_A Uncharacterized protein 99.5 2.5E-13 8.6E-18 152.5 21.2 335 114-491 59-393 (394)
396 3g39_A Variable lymphocyte rec 99.5 8E-14 2.7E-18 136.7 10.4 108 489-598 12-119 (170)
397 3g39_A Variable lymphocyte rec 99.5 1.7E-13 5.8E-18 134.3 11.7 104 201-307 12-115 (170)
398 2r9u_A Variable lymphocyte rec 99.4 4E-13 1.4E-17 132.2 11.9 104 201-307 15-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 5.5E-13 1.9E-17 131.2 11.9 104 177-283 15-118 (174)
400 3un9_A NLR family member X1; l 99.3 2.7E-14 9.2E-19 158.4 -3.7 186 102-307 72-283 (372)
401 2ifg_A High affinity nerve gro 99.3 1.1E-12 3.7E-17 144.7 8.4 108 66-187 8-116 (347)
402 3un9_A NLR family member X1; l 99.3 2E-14 6.9E-19 159.3 -5.7 184 125-331 71-283 (372)
403 4gt6_A Cell surface protein; l 99.3 2.2E-10 7.5E-15 128.4 23.8 331 96-451 57-391 (394)
404 2ifg_A High affinity nerve gro 99.3 1.4E-11 4.7E-16 135.7 11.6 103 202-307 12-116 (347)
405 4gt6_A Cell surface protein; l 99.2 3.9E-10 1.3E-14 126.4 23.1 335 115-498 52-390 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.1E-15 122.7 7.7 142 712-867 16-214 (263)
407 2ra8_A Uncharacterized protein 99.1 4.1E-11 1.4E-15 131.6 3.1 205 77-305 106-341 (362)
408 2ra8_A Uncharacterized protein 99.0 1.4E-10 4.7E-15 127.4 5.0 213 102-353 107-341 (362)
409 3rw6_A Nuclear RNA export fact 99.0 1.8E-11 6E-16 127.6 -3.9 22 65-86 77-98 (267)
410 4h09_A Hypothetical leucine ri 99.0 4.2E-08 1.4E-12 109.1 22.8 316 97-438 41-356 (379)
411 4h09_A Hypothetical leucine ri 99.0 7.4E-08 2.5E-12 107.2 24.7 130 337-470 212-341 (379)
412 1nd4_A Aminoglycoside 3'-phosp 98.9 8.3E-10 2.8E-14 116.0 6.1 132 717-867 26-215 (264)
413 3dxp_A Putative acyl-COA dehyd 98.9 2.7E-09 9.1E-14 118.0 9.3 141 716-866 44-248 (359)
414 1io0_A Tropomodulin; LRR prote 98.6 6.1E-09 2.1E-13 103.2 -0.7 123 93-235 27-164 (185)
415 3rw6_A Nuclear RNA export fact 98.4 1.4E-08 4.9E-13 105.6 -1.7 65 197-263 169-237 (267)
416 3r70_A Aminoglycoside phosphot 98.4 9.9E-07 3.4E-11 95.5 12.0 133 715-867 42-238 (320)
417 3sg8_A APH(2'')-ID; antibiotic 98.4 6.1E-07 2.1E-11 96.4 10.1 136 716-867 26-224 (304)
418 1io0_A Tropomodulin; LRR prote 98.3 1.1E-07 3.8E-12 94.0 1.4 42 218-259 32-78 (185)
419 3tdw_A Gentamicin resistance p 98.3 5.6E-06 1.9E-10 88.8 13.7 136 716-867 25-225 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.2 6.2E-06 2.1E-10 86.8 12.3 136 717-867 31-224 (272)
421 3d1u_A Putative fructosamine-3 98.2 5.8E-06 2E-10 87.7 10.8 75 715-796 20-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.4E-05 4.9E-10 87.7 11.7 72 716-796 47-121 (362)
423 3ats_A Putative uncharacterize 97.9 7.5E-06 2.6E-10 90.0 5.7 82 716-797 26-121 (357)
424 2olc_A MTR kinase, methylthior 97.7 5E-05 1.7E-09 84.6 8.7 77 716-794 36-120 (397)
425 2q83_A YTAA protein; 2635576, 97.7 0.00013 4.4E-09 79.3 11.8 32 835-866 221-252 (346)
426 3jr1_A Putative fructosamine-3 97.6 0.00019 6.5E-09 76.7 10.6 139 716-862 42-232 (312)
427 2pyw_A Uncharacterized protein 97.5 0.00027 9.1E-09 79.4 10.8 32 835-867 231-262 (420)
428 3e4g_A ATP synthase subunit S, 97.5 2.9E-05 1E-09 74.7 1.8 34 103-136 62-95 (176)
429 3e4g_A ATP synthase subunit S, 97.4 5.8E-05 2E-09 72.7 2.6 34 223-256 62-95 (176)
430 1pgv_A TMD-1, tropomodulin TMD 97.2 4.1E-05 1.4E-09 75.2 -0.9 122 94-235 33-170 (197)
431 3f7w_A Putative fructosamine-3 97.2 0.0023 7.8E-08 67.6 12.2 73 716-795 21-96 (288)
432 3csv_A Aminoglycoside phosphot 97.0 0.0015 5E-08 70.7 9.3 33 835-867 182-218 (333)
433 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00034 1.1E-08 68.7 2.5 15 245-259 69-83 (197)
434 2ppq_A HSK, HK, homoserine kin 96.8 0.0042 1.4E-07 66.6 11.0 145 716-866 28-217 (322)
435 1zyl_A Hypothetical protein YI 96.8 0.0034 1.2E-07 67.6 9.5 144 716-866 32-223 (328)
436 3dxq_A Choline/ethanolamine ki 96.6 0.0018 6.1E-08 68.9 5.8 70 716-796 24-95 (301)
437 3rfe_A Platelet glycoprotein I 96.6 0.0018 6.2E-08 59.2 5.1 55 513-569 12-67 (130)
438 3feg_A Choline/ethanolamine ki 96.6 0.0032 1.1E-07 69.0 7.6 143 716-866 56-254 (379)
439 1nw1_A Choline kinase (49.2 KD 96.5 0.0041 1.4E-07 69.7 8.1 71 716-795 79-158 (429)
440 3rfe_A Platelet glycoprotein I 96.5 0.0041 1.4E-07 56.9 6.4 55 202-258 12-67 (130)
441 2qg7_A Ethanolamine kinase PV0 96.2 0.011 3.6E-07 66.6 9.3 73 716-796 114-188 (458)
442 3c5i_A Choline kinase; choline 96.1 0.0032 1.1E-07 69.1 4.5 72 716-795 39-120 (369)
443 3i1a_A Spectinomycin phosphotr 96.0 0.0085 2.9E-07 64.8 7.0 32 836-867 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.4 0.029 9.8E-07 61.7 8.2 147 716-866 58-280 (401)
445 3mes_A Choline kinase; malaria 94.1 0.077 2.6E-06 58.8 7.7 72 716-795 76-156 (424)
446 3g15_A CK, chetk-alpha, cholin 88.4 0.92 3.1E-05 49.9 8.3 29 838-866 246-280 (401)
447 4ano_A ESSB; membrane protein, 67.6 9.7 0.00033 37.4 6.8 86 767-867 48-134 (219)
448 3cxl_A N-chimerin; SH2, RHO-GA 66.9 0.49 1.7E-05 53.1 -3.1 61 715-779 147-214 (463)
449 4ann_A ESSB; membrane protein, 59.9 7 0.00024 38.3 4.1 93 759-867 36-129 (215)
450 2lz0_A Uncharacterized protein 27.7 1.2E+02 0.0041 25.3 6.2 42 165-207 11-52 (100)
451 3ls8_A Phosphatidylinositol 3- 25.9 7.7E+02 0.026 28.0 14.3 46 813-865 454-501 (614)
452 2lz0_A Uncharacterized protein 25.7 1.4E+02 0.0047 25.0 6.2 12 194-205 16-27 (100)
453 2k1k_A Ephrin type-A receptor 21.8 4.9 0.00017 27.3 -2.9 13 649-661 9-21 (38)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.5e-90 Score=845.36 Aligned_cols=598 Identities=31% Similarity=0.512 Sum_probs=482.9
Q ss_pred HhhcCCChhhHHHHHHHHHhCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCccccEEecCCCCCEEEEEcCCCCcccc---
Q 043136 17 VFSANTLPLPLVSLLSIKASLKDPFNNSFHDWDATPAFSNPSSEQEPVWCSWSGIKCNPKSSQITSLDLSRRSLSGP--- 93 (902)
Q Consensus 17 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~~~~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~--- 93 (902)
.+++.+.++|++||++||+++.||. .+++|+.+ + +||+|.||+|+ +++|+.|+|++++++|.
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~--~l~~W~~~------~-----~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~ 68 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN--LLPDWSSN------K-----NPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSA 68 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT--SSTTCCTT------S-----CGGGSTTEEEE--TTEEEEEECTTSCCCEEHHH
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc--cccCCCCC------C-----CCcCCcceEEC--CCcEEEEECCCCCcCCccCc
Confidence 3445567889999999999999876 69999744 3 39999999999 57999999999999987
Q ss_pred cC-----------------------ccccCCCCCCEEEccCCCCcccCch--hhhccCCCcEEEccCCCCCCCCCccc-c
Q 043136 94 IP-----------------------PEIRYLTSLTHLNLSANAFDGPLQP--AILELTKLRTIDISHNSFNSTFPPGI-S 147 (902)
Q Consensus 94 ~~-----------------------~~~~~l~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~l-~ 147 (902)
+| +.|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .
T Consensus 69 l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 148 (768)
T 3rgz_A 69 VSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL 148 (768)
T ss_dssp HHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCC
T ss_pred cChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhc
Confidence 44 5788889999999999999999988 89999999999999999998888775 6
Q ss_pred cccccceeccccccccCCCchh---h----------------------hcccCCcEEeccCccCcCCCCcccCCCCCCCE
Q 043136 148 KLRFLRIFNAYSNSFTGPLPLE---F----------------------VQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRF 202 (902)
Q Consensus 148 ~l~~L~~L~L~~N~l~~~~p~~---~----------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 202 (902)
++++|++|+|++|++++..|.. + ..+++|++|+|++|++++.+|. ++++++|++
T Consensus 149 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~ 227 (768)
T 3rgz_A 149 KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQH 227 (768)
T ss_dssp CCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCE
T ss_pred cCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCE
Confidence 7777777777777776665544 2 4566777777777888777776 788888888
Q ss_pred EEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCC-CCccEEecCCCc
Q 043136 203 LDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNL-TKLEMLLLFKNH 281 (902)
Q Consensus 203 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 281 (902)
|+|++|++++.+|..++.+++|++|++++|++++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|+
T Consensus 228 L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~ 305 (768)
T 3rgz_A 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 305 (768)
T ss_dssp EECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSE
T ss_pred EECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCc
Confidence 888888888777777777777777777777776555443 44555555555555555555444443 455555555555
Q ss_pred cceecCCCCCCcCcCcEEecccCCCc-------------------------cccCccccccC-CCCEEEccCccccccCC
Q 043136 282 FTGEIPVSYGNLQALQVLDLSDNQLS-------------------------GPIPASLASLK-GLTRLSLMNNVLFGEIP 335 (902)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~Ls~N~l~-------------------------~~~p~~l~~l~-~L~~L~L~~N~l~~~~p 335 (902)
+++.+|..|+++++|++|+|++|+++ +.+|..+..++ +|++|++++|.+++.+|
T Consensus 306 l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~ 385 (768)
T 3rgz_A 306 FYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385 (768)
T ss_dssp EEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECC
T ss_pred CCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcC
Confidence 55444544555555555555555544 44444444444 45555555555544444
Q ss_pred hhhhh--ccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccccc
Q 043136 336 QDIEL--LADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNC 413 (902)
Q Consensus 336 ~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l 413 (902)
..+.. +++|++|++++|++++.+|..+..+++|+.|++++|++++.+|..++.+++|++|++++|++++.+|..+..+
T Consensus 386 ~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 465 (768)
T 3rgz_A 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465 (768)
T ss_dssp TTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred hhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCC
Confidence 44443 5567777777777777888888889999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceecc
Q 043136 414 SSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSA 493 (902)
Q Consensus 414 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 493 (902)
++|++|++++|+++|.+|.+++.+++|++|+|++|++++.+|.+++++++|++|+|++|++++.+|..++.+++|+.|++
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCcccccc------------------------------------------------------------------
Q 043136 494 SSSKLTGKIPDFIG------------------------------------------------------------------ 507 (902)
Q Consensus 494 s~N~l~~~~p~~~~------------------------------------------------------------------ 507 (902)
++|+++|.+|..+.
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 99999988875321
Q ss_pred -----cccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCcc
Q 043136 508 -----CKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCST 582 (902)
Q Consensus 508 -----~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~ 582 (902)
+.+|+.|||++|+++|.+|.+++.+++|+.|+|++|+++|.+|..|+++++|++||||+|+++|.||..|.++++
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~ 705 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCC
Confidence 356889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecccCCcccccCCCCCCcCcCCCCCcccCCcccCCCCcCCCCCCCCCCC
Q 043136 583 LESFNVSYNLLTGPIPASGTIFPNLHPSSFIGNEGLCGRVLTKPCPADGLAA 634 (902)
Q Consensus 583 L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~gn~~lcg~~~~~~c~~~~~~~ 634 (902)
|++||||+|+|+|+||+.+++.++ ++.+|.||++|||.|+. +|+...++.
T Consensus 706 L~~L~ls~N~l~g~iP~~~~~~~~-~~~~~~gN~~Lcg~~l~-~C~~~~~~~ 755 (768)
T 3rgz_A 706 LTEIDLSNNNLSGPIPEMGQFETF-PPAKFLNNPGLCGYPLP-RCDPSNADG 755 (768)
T ss_dssp CSEEECCSSEEEEECCSSSSGGGS-CGGGGCSCTEEESTTSC-CCCSCC---
T ss_pred CCEEECcCCcccccCCCchhhccC-CHHHhcCCchhcCCCCc-CCCCCccCC
Confidence 999999999999999999998875 89999999999999976 898655443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-70 Score=671.60 Aligned_cols=515 Identities=34% Similarity=0.510 Sum_probs=463.2
Q ss_pred CCEEEEEcCCCCcccccCccc-cCCCCCCEEEccCCCCcccCchh---h----------------------hccCCCcEE
Q 043136 78 SQITSLDLSRRSLSGPIPPEI-RYLTSLTHLNLSANAFDGPLQPA---I----------------------LELTKLRTI 131 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~~---~----------------------~~l~~L~~L 131 (902)
.+++.|+|++|.+++.+|..+ .++++|++|+|++|++++..|.. + ..+++|++|
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L 205 (768)
T 3rgz_A 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205 (768)
T ss_dssp TTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEE
T ss_pred CCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEE
Confidence 368888888888888777765 77777777777777777766554 3 456677777
Q ss_pred EccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCcc
Q 043136 132 DISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLT 211 (902)
Q Consensus 132 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 211 (902)
+|++|++++.+|. ++++++|++|++++|++++.+|..|+.+++|++|+|++|++++.+|.. .+++|++|+|++|+++
T Consensus 206 ~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~ 282 (768)
T 3rgz_A 206 DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282 (768)
T ss_dssp ECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEE
T ss_pred ECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccC
Confidence 7777777776666 888888888888888888888888888888888888888888777765 7888888888888888
Q ss_pred CCCCccccCC-CCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCcc-ccCCCCccEEecCCCccceecCCC
Q 043136 212 GSLPPQLGLL-TQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSE-ISNLTKLEMLLLFKNHFTGEIPVS 289 (902)
Q Consensus 212 ~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~ 289 (902)
+.+|..+... ++|++|++++|++++.+|..|+.+++|++|+|++|+++|.+|.. +.++++|++|+|++|++++.+|..
T Consensus 283 ~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp ESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred CccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 8889888775 99999999999999999999999999999999999999888866 899999999999999999999999
Q ss_pred CCCcC-cCcEEecccCCCccccCccccc--cCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCC
Q 043136 290 YGNLQ-ALQVLDLSDNQLSGPIPASLAS--LKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNG 366 (902)
Q Consensus 290 ~~~l~-~L~~L~Ls~N~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 366 (902)
+.+++ +|++|+|++|++++.+|..+.. +++|++|++++|.+++.+|..+..+++|++|++++|++++.+|..+..++
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 442 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC
Confidence 99887 9999999999999999998887 88999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEcc
Q 043136 367 KLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMS 446 (902)
Q Consensus 367 ~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 446 (902)
+|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+.++++|++|+|++|++++.+|.+|+.+++|++|+|+
T Consensus 443 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCcCcccCcCceecccccccCCCcChhhhc------------------------------------------
Q 043136 447 RNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWS------------------------------------------ 484 (902)
Q Consensus 447 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------------------------------------ 484 (902)
+|+++|.+|..++++++|++|+|++|+++|.+|.+++.
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 99999999999999999999999999999888876543
Q ss_pred ----------------------------ccccceeccCCCccCCCcccccc-cccccEEeccCccccccCCccccccccc
Q 043136 485 ----------------------------APNLKILSASSSKLTGKIPDFIG-CKSIYKIELHNNLLNGSIPWDIGHCEKL 535 (902)
Q Consensus 485 ----------------------------l~~L~~L~ls~N~l~~~~p~~~~-~~~l~~l~Ls~N~l~g~ip~~~~~l~~L 535 (902)
+++|+.|||++|+++|.+|..++ +++|+.|+|++|+++|.||.+++.+++|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 46789999999999999998777 9999999999999999999999999999
Q ss_pred eEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCc-cccc
Q 043136 536 LLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNL-LTGP 596 (902)
Q Consensus 536 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~-l~g~ 596 (902)
+.||||+|+++|.+|..++++++|++||||+|+|+|.||.. ..+..+....+.+|+ |+|.
T Consensus 683 ~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 683 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999999999999999999999974 455666667777885 7874
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.3e-64 Score=608.82 Aligned_cols=543 Identities=21% Similarity=0.205 Sum_probs=484.2
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecc
Q 043136 78 SQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNA 157 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 157 (902)
.+++.|+|++|++++..+..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 58999999999999888889999999999999999999999999999999999999999999876678999999999999
Q ss_pred ccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCcccc--CCCCCcEEEeeCcccC
Q 043136 158 YSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLG--LLTQLERIEIGYNNLQ 235 (902)
Q Consensus 158 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~ 235 (902)
++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..+. .+++|++|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999998889999999999999999999999999999999999999999999987777665 5689999999999999
Q ss_pred CCCChhccCC---------------------------CCCCEEEccCccCcccCCccccCCCC--ccEEecCCCccceec
Q 043136 236 GEVPVEFASL---------------------------VNLKYMDISACNLSGTLPSEISNLTK--LEMLLLFKNHFTGEI 286 (902)
Q Consensus 236 ~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~ 286 (902)
+..|..|..+ ++|++|++++|.+++..|..|.+++. |++|+|++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 9888877654 56788888999999888988988865 999999999999988
Q ss_pred CCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccc-----cCCh----hhhhccccceEEecCceeccc
Q 043136 287 PVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFG-----EIPQ----DIELLADLDTLLLWNNHLTGV 357 (902)
Q Consensus 287 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~ 357 (902)
|..|+.+++|++|+|++|++++..|..|..+++|++|++++|...+ .+|. .|..+++|++|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 8999999999999999999999999999999999999999886654 2333 678899999999999999999
Q ss_pred cCccccCCCceeEEEecCCcccCCC--CCCccC--CCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCC-c
Q 043136 358 LPQKLGSNGKLLTVDVSSNSLTGPI--PPTICD--GDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIP-Q 432 (902)
Q Consensus 358 ~~~~~~~~~~L~~L~Ls~N~l~~~~--p~~~~~--~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~ 432 (902)
.+..|..+++|++|++++|.+++.. +..+.. ..+|+.|++++|++++..|..+..+++|+.|+|++|++++.+| .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 9999999999999999999865432 223332 2589999999999999999999999999999999999998766 6
Q ss_pred ccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccC--CCcChhhhcccccceeccCCCccCCCccccc-ccc
Q 043136 433 GFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQ--TSLPSNIWSAPNLKILSASSSKLTGKIPDFI-GCK 509 (902)
Q Consensus 433 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~ 509 (902)
.|..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..+..+++|+.|++++|++++..|..+ +++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 8999999999999999999999999999999999999999987 6789999999999999999999998877754 599
Q ss_pred cccEEeccCccccccC--------CccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCc
Q 043136 510 SIYKIELHNNLLNGSI--------PWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCS 581 (902)
Q Consensus 510 ~l~~l~Ls~N~l~g~i--------p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~ 581 (902)
+|+.|+|++|++++.. +..++.+++|+.|+|++|+++.+.+..|+++++|+.|||++|+|++..|..|.+++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 9999999999998642 23478999999999999999976667899999999999999999977777889999
Q ss_pred cceeecccCCcccccCCCCCC-cCcCCCCCcccCCcccCC
Q 043136 582 TLESFNVSYNLLTGPIPASGT-IFPNLHPSSFIGNEGLCG 620 (902)
Q Consensus 582 ~L~~l~ls~N~l~g~ip~~~~-~~~~~~~~~~~gn~~lcg 620 (902)
+|+.|+|++|+|++.+|.... ..+.+......||+..|.
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999999999998775432 234456677889988885
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.6e-61 Score=579.82 Aligned_cols=493 Identities=17% Similarity=0.164 Sum_probs=348.0
Q ss_pred CCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEecc
Q 043136 103 SLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLG 182 (902)
Q Consensus 103 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 182 (902)
++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 44555555555555445555555555555555555555445555555555555555555555555555555555555555
Q ss_pred CccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCC--EEEccCccCcc
Q 043136 183 GSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLK--YMDISACNLSG 260 (902)
Q Consensus 183 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~Ls~N~l~~ 260 (902)
+|++++..|..|+++++|++|+|++|++++..++.+..+++|++|++++|++++..|..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 5555544444455555555555555555542222233355555555555555544444555555555 45555555554
Q ss_pred cCCccccCCCCccEEecCCCc---------------------cc-----eecCCCCCCcC--cCcEEecccCCCccccCc
Q 043136 261 TLPSEISNLTKLEMLLLFKNH---------------------FT-----GEIPVSYGNLQ--ALQVLDLSDNQLSGPIPA 312 (902)
Q Consensus 261 ~~p~~~~~l~~L~~L~L~~N~---------------------l~-----~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~ 312 (902)
..|..+.. .+|++|++++|. +. ...+..+..+. +|+.|++++|.+++..+.
T Consensus 194 ~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 194 IEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp ECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred cChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 44433322 345555554443 11 11112223332 688888999988887777
Q ss_pred cccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCC-ccCCCC
Q 043136 313 SLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPT-ICDGDR 391 (902)
Q Consensus 313 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~~~~ 391 (902)
.|..+++|++|++++|.++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|.. +..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 8888888999999988886 67778888888999999999888888888888888999999999888777654 788888
Q ss_pred ccEEeccCCcCcccc--cccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCc-CcccCcCceec
Q 043136 392 LFKLILFSNNFTYSI--PENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRD-LGNAQKLEYLN 468 (902)
Q Consensus 392 L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ 468 (902)
|++|++++|++.+.. |..+..+++|++|++++|++++..|..|..+++|++|++++|++++..|.. +..+++|++|+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 889999988888766 777888889999999999888888888888899999999999988776544 88888999999
Q ss_pred ccccccCCCcChhhhcccccceeccCCCccCCC-cc--c-ccccccccEEeccCccccccCCccccccccceEEEeeCCc
Q 043136 469 ISENSFQTSLPSNIWSAPNLKILSASSSKLTGK-IP--D-FIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNS 544 (902)
Q Consensus 469 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p--~-~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~ 544 (902)
+++|.+++..|..+..+++|+.|++++|++++. +| . +..+++|+.|++++|++++.+|..++.+++|+.|+|++|+
T Consensus 432 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 432 LSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp CTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCc
Confidence 999998888888888888999999999988763 22 2 3347888889999998888888888888899999999999
Q ss_pred ceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCC
Q 043136 545 LTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIP 598 (902)
Q Consensus 545 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip 598 (902)
+++.+|..+.+++.| .|||++|++++.+|..|..+++|+.|++++|++.+..+
T Consensus 512 l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 512 LTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 988888888888888 89999999988888888888888999999998887555
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8e-60 Score=572.79 Aligned_cols=531 Identities=20% Similarity=0.213 Sum_probs=461.7
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNS 161 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 161 (902)
.+|+++++++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 3566667776 5776664 799999999999999888899999999999999999999999999999999999999999
Q ss_pred ccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChh
Q 043136 162 FTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVE 241 (902)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 241 (902)
+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|++++..+..
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred cCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 99877778999999999999999999888889999999999999999999999999999999999999999999888877
Q ss_pred cc--CCCCCCEEEccCccCcccCCccccCC---------------------------CCccEEecCCCccceecCCCCCC
Q 043136 242 FA--SLVNLKYMDISACNLSGTLPSEISNL---------------------------TKLEMLLLFKNHFTGEIPVSYGN 292 (902)
Q Consensus 242 ~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~ 292 (902)
+. .+++|++|++++|++++..|..|..+ ++|++|++++|++++..|..|.+
T Consensus 165 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~ 244 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG 244 (680)
T ss_dssp HGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGG
T ss_pred hhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhc
Confidence 65 56899999999999998888777654 56788888899999888989988
Q ss_pred cCc--CcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceecc-----ccC----cc
Q 043136 293 LQA--LQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTG-----VLP----QK 361 (902)
Q Consensus 293 l~~--L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~~----~~ 361 (902)
++. |++|+|++|++++..|..|..+++|++|++++|.+.+..|..|..+++|+.|++++|...+ .+| ..
T Consensus 245 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~ 324 (680)
T 1ziw_A 245 LKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS 324 (680)
T ss_dssp GGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTT
T ss_pred cCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhh
Confidence 865 9999999999998888999999999999999999999999999999999999999876553 223 36
Q ss_pred ccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccc--ccccccc--CCCcEEEccCCccCCCCCcccCCC
Q 043136 362 LGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSI--PENLVNC--SSLSRLRIQDNQLNGSIPQGFGLL 437 (902)
Q Consensus 362 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~--p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l 437 (902)
|..+++|+.|++++|++++..|..+..+++|++|++++|.+.... +..+..+ ++|+.|++++|++++..|..|..+
T Consensus 325 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 404 (680)
T 1ziw_A 325 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWL 404 (680)
T ss_dssp TTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCC
Confidence 788999999999999999998999999999999999999865432 2234433 589999999999999999999999
Q ss_pred CCCcEEEccCcccCCCCC-CcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccC--CCcccccc-cccccE
Q 043136 438 PNLTFMDMSRNSLSGEIP-RDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLT--GKIPDFIG-CKSIYK 513 (902)
Q Consensus 438 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--~~~p~~~~-~~~l~~ 513 (902)
++|++|+|++|++++.+| ..|.++++|++|++++|++.+..+..+..+++|+.|++++|.++ +.+|..++ +++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 999999999999998776 68899999999999999999888999999999999999999987 45676554 899999
Q ss_pred EeccCccccccCCccccccccceEEEeeCCcceecCC--------CCCCCCCcccEEEccCCcccccCCCCCcCCcccee
Q 043136 514 IELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIP--------WEISGLPSITDVDLSHNFLTGTIPSNFENCSTLES 585 (902)
Q Consensus 514 l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p--------~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~ 585 (902)
|+|++|++++..|..++.+++|++|+|++|++++..+ ..++++++|++|+|++|+++...+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 9999999998878889999999999999999997632 34789999999999999999544457999999999
Q ss_pred ecccCCcccccCCCCCCcCcCCCCCcccCC
Q 043136 586 FNVSYNLLTGPIPASGTIFPNLHPSSFIGN 615 (902)
Q Consensus 586 l~ls~N~l~g~ip~~~~~~~~~~~~~~~gn 615 (902)
|+|++|+|++..|......+.+......+|
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 999999999655543232333344444444
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.7e-62 Score=585.77 Aligned_cols=499 Identities=21% Similarity=0.280 Sum_probs=325.4
Q ss_pred ChhhHHHHHHHHHhCCCCCCC-------CcCCCCCCCCCCCCCCCCCCCCCcc---ccEEecCCCCCEEEEEcCCCCccc
Q 043136 23 LPLPLVSLLSIKASLKDPFNN-------SFHDWDATPAFSNPSSEQEPVWCSW---SGIKCNPKSSQITSLDLSRRSLSG 92 (902)
Q Consensus 23 ~~~~~~aLl~~k~~~~~~~~~-------~l~~W~~~~~~~~~~~~~~~~~C~w---~Gv~c~~~~~~v~~L~L~~~~l~g 92 (902)
...|++||.+||+++.++... ...+|+.+ ++||.| .||+|+.. +||+.|+|++++++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-----------~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g 95 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-----------KELDMWGAQPGVSLNSN-GRVTGLSLEGFGASG 95 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-----------SCGGGTTCCTTEEECTT-CCEEEEECTTSCCEE
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-----------CCcccccCCCCeEEcCC-CCEEEEEecCcccCC
Confidence 456999999999998765331 12367644 249999 99999876 699999999999999
Q ss_pred ccCccccCCCCCCEEEccCCCC------cc------cCchhhhccCCCcEEEccCCCCCCCCCccccc-ccccceecccc
Q 043136 93 PIPPEIRYLTSLTHLNLSANAF------DG------PLQPAILELTKLRTIDISHNSFNSTFPPGISK-LRFLRIFNAYS 159 (902)
Q Consensus 93 ~~~~~~~~l~~L~~L~Ls~n~l------~~------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~~ 159 (902)
.+|+++++|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..++. +..+..+++..
T Consensus 96 ~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~ 172 (636)
T 4eco_A 96 RVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQ 172 (636)
T ss_dssp EECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTS
T ss_pred cCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccc
Confidence 9999999999999999999976 33 344444 56677 888888888877777663 23444444443
Q ss_pred ccccCCCchhhhcccCCcEEecc--CccCcCCCCcccCCCCCCCEEEccCCCccCC-----------------CCcccc-
Q 043136 160 NSFTGPLPLEFVQLNSLQQLNLG--GSYFDGEIPSDYRNLSSLRFLDLAGNSLTGS-----------------LPPQLG- 219 (902)
Q Consensus 160 N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~- 219 (902)
..+.. .....++.+.+. +|+++| +|..|+++++|++|+|++|++++. +|..++
T Consensus 173 ~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~ 245 (636)
T 4eco_A 173 KSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKW 245 (636)
T ss_dssp CCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred ccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhh
Confidence 32221 111223333333 466666 666677777777777777777664 677766
Q ss_pred -CCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCcc-Ccc-cCCccccCC------CCccEEecCCCccceecCC--
Q 043136 220 -LLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACN-LSG-TLPSEISNL------TKLEMLLLFKNHFTGEIPV-- 288 (902)
Q Consensus 220 -~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~-- 288 (902)
++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|.
T Consensus 246 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 246 DNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred cccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 77777777777777777777777777777777777776 776 667666665 67777777777777 6666
Q ss_pred CCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccc-cceEEecCceeccccCccccCCC-
Q 043136 289 SYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLAD-LDTLLLWNNHLTGVLPQKLGSNG- 366 (902)
Q Consensus 289 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~- 366 (902)
.++++++|++|+|++|+++|.+| .+..+++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+....
T Consensus 325 ~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l 401 (636)
T 4eco_A 325 SLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSV 401 (636)
T ss_dssp HHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCS
T ss_pred hhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhccc
Confidence 67777777777777777776666 6677777777777777766 66666666766 777777777776 5566655544
Q ss_pred -ceeEEEecCCcccCCCCCCcc-------CCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCC-C
Q 043136 367 -KLLTVDVSSNSLTGPIPPTIC-------DGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGL-L 437 (902)
Q Consensus 367 -~L~~L~Ls~N~l~~~~p~~~~-------~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-l 437 (902)
+|+.|++++|++++.+|..+. .+.+|++|++++|+++...+..+..+++|+.|+|++|+++ .+|..+.. .
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~ 480 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE 480 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc
Confidence 677777777777777776666 5555666666666665322222344566666666666666 34433221 1
Q ss_pred -------CCCcEEEccCcccCCCCCCcCc--ccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCccccccc
Q 043136 438 -------PNLTFMDMSRNSLSGEIPRDLG--NAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGC 508 (902)
Q Consensus 438 -------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 508 (902)
++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++|+
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~----------- 547 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR----------- 547 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB-----------
T ss_pred cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc-----------
Confidence 15566666666655 4555554 55556666666665554 55555555555555555554
Q ss_pred ccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCccc
Q 043136 509 KSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLT 570 (902)
Q Consensus 509 ~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 570 (902)
++++|++.+.+|..++.+++|+.|+|++|+| +.+|..+. ++|+.|||++|++.
T Consensus 548 ------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 548 ------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp ------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred ------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 2355666666666666666666666666666 45555544 55666666666554
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.2e-60 Score=585.43 Aligned_cols=544 Identities=20% Similarity=0.206 Sum_probs=454.8
Q ss_pred CccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccC-chhhhccCCCcEEEccCCCCCCCCCc
Q 043136 66 CSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPL-QPAILELTKLRTIDISHNSFNSTFPP 144 (902)
Q Consensus 66 C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~ 144 (902)
|+|..|-+ .+.+++.|||++|.+++..|..|+++++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56777776 4458999999999999988999999999999999999766655 77899999999999999999999999
Q ss_pred ccccccccceeccccccccCCCchh--hhcccCCcEEeccCccCcCCCC-cccCCCCCCCEEEccCCCccCCCCccccCC
Q 043136 145 GISKLRFLRIFNAYSNSFTGPLPLE--FVQLNSLQQLNLGGSYFDGEIP-SDYRNLSSLRFLDLAGNSLTGSLPPQLGLL 221 (902)
Q Consensus 145 ~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 221 (902)
.|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999877765 9999999999999999987765 578999999999999999999899999888
Q ss_pred --CCCcEEEeeCcccCCCCChhccCCCC------CCEEEccCccCcccCCccccCC---CCccEEecCCC---------c
Q 043136 222 --TQLERIEIGYNNLQGEVPVEFASLVN------LKYMDISACNLSGTLPSEISNL---TKLEMLLLFKN---------H 281 (902)
Q Consensus 222 --~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N---------~ 281 (902)
++|+.|+++.|.+.+..|..++.+.+ |++|++++|.+++..|..+... ++++.|.++.+ .
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999988887777665 9999999999998888776643 67888887743 3
Q ss_pred cceecCCCCCCc--CcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccC
Q 043136 282 FTGEIPVSYGNL--QALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLP 359 (902)
Q Consensus 282 l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 359 (902)
+.+..+..|..+ ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+.+..|..|..+++|++|+|++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 333444455554 689999999999998888999999999999999999998888899999999999999999998889
Q ss_pred ccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCC
Q 043136 360 QKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPN 439 (902)
Q Consensus 360 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 439 (902)
..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+++. ..+++|+.|++++|+++ .+|.. ..+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccc
Confidence 9999999999999999999988888899999999999999998842 23788999999999998 55654 567
Q ss_pred CcEEEccCcccCCCC-CCcCcccCcCceecccccccCCCcCh-hhhcccccceeccCCCccCCC-----cccc-cccccc
Q 043136 440 LTFMDMSRNSLSGEI-PRDLGNAQKLEYLNISENSFQTSLPS-NIWSAPNLKILSASSSKLTGK-----IPDF-IGCKSI 511 (902)
Q Consensus 440 L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~-----~p~~-~~~~~l 511 (902)
++.|++++|++++.. +..+.++++|++|+|++|++++..+. .+..+++|+.|++++|++++. .+.. .++++|
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L 482 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL 482 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE
T ss_pred cceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc
Confidence 899999999998642 22356889999999999999865443 455678999999999998743 3333 348899
Q ss_pred cEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCC
Q 043136 512 YKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYN 591 (902)
Q Consensus 512 ~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N 591 (902)
+.|+|++|++++.+|..++.+++|+.|+|++|+|++.+|..+. ++|+.|||++|+|++.+|..|. +|+.+++++|
T Consensus 483 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~N 557 (844)
T 3j0a_A 483 QVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHN 557 (844)
T ss_dssp ECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEE
T ss_pred cEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCC
Confidence 9999999999988888899999999999999999988887776 8899999999999999888765 6788999999
Q ss_pred cccccCCCCCCcCcCCCCCcccCCcccCCCCcCCCCCCC
Q 043136 592 LLTGPIPASGTIFPNLHPSSFIGNEGLCGRVLTKPCPAD 630 (902)
Q Consensus 592 ~l~g~ip~~~~~~~~~~~~~~~gn~~lcg~~~~~~c~~~ 630 (902)
++.+..+.. .+ ......+|..+||.+....|..+
T Consensus 558 p~~C~c~~~----~f-~~~~~~~~~~~~~~~~~~~C~~p 591 (844)
T 3j0a_A 558 KFICECELS----TF-INWLNHTNVTIAGPPADIYCVYP 591 (844)
T ss_dssp CCCCSSSCC----SH-HHHHHHTTTTTCCCGGGCCCSSC
T ss_pred CcccccccH----HH-HHHHHhcCcccccccccCccCCc
Confidence 998766532 11 11223456677887777778643
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-60 Score=578.40 Aligned_cols=525 Identities=20% Similarity=0.266 Sum_probs=341.7
Q ss_pred cCCChhhHHHHHHHHHhCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCcc------------ccEEecCCCCCEEEEEcCC
Q 043136 20 ANTLPLPLVSLLSIKASLKDPFNNSFHDWDATPAFSNPSSEQEPVWCSW------------SGIKCNPKSSQITSLDLSR 87 (902)
Q Consensus 20 ~~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~~~~~C~w------------~Gv~c~~~~~~v~~L~L~~ 87 (902)
+++..+|++||++||+++.+| +|+.+..+. ...|++|+| .||+|+. .+||+.|+|++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~------~W~~~~~~~----~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~ 332 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK------NWRYYSGTI----NNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAG 332 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG------GCCCCCSSC----SSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTT
T ss_pred cccchHHHHHHHHHHHHcCCC------CCCcCCCcc----cccCCccccccccccccccCcCceEecC-CCCEEEEECcc
Confidence 345678999999999999765 687652000 012334999 9999987 46999999999
Q ss_pred CCcccccCccccCCCCCCEEEc-cCCCCcccCchhhhcc----C-----CCcEE------E-ccCCCCCCC---------
Q 043136 88 RSLSGPIPPEIRYLTSLTHLNL-SANAFDGPLQPAILEL----T-----KLRTI------D-ISHNSFNST--------- 141 (902)
Q Consensus 88 ~~l~g~~~~~~~~l~~L~~L~L-s~n~l~~~~~~~~~~l----~-----~L~~L------~-Ls~N~l~~~--------- 141 (902)
++++|.+|++|++|++|++|+| ++|.++|..|...... + .++.. + .....+.+.
T Consensus 333 ~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~ 412 (876)
T 4ecn_A 333 FGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNP 412 (876)
T ss_dssp TCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCT
T ss_pred CCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCc
Confidence 9999999999999999999999 8999988744321111 0 00000 0 000001100
Q ss_pred --CCcccccccccceecccc--ccccCCCchhhhcccCCcEEeccCccCcCC-CCcccCCCCCCCEEEccCCCccCCCCc
Q 043136 142 --FPPGISKLRFLRIFNAYS--NSFTGPLPLEFVQLNSLQQLNLGGSYFDGE-IPSDYRNLSSLRFLDLAGNSLTGSLPP 216 (902)
Q Consensus 142 --~p~~l~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~ 216 (902)
.+........++.+.+.. |++++ +|..|+++++|++|+|++|++++. +|..+.. ++.|.++|.+|.
T Consensus 413 ~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~--------~s~n~~~g~iP~ 483 (876)
T 4ecn_A 413 EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED--------ANSDYAKQYENE 483 (876)
T ss_dssp TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC--------TTSHHHHHHTTS
T ss_pred cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc--------cccccccccCCh
Confidence 111112223344444443 66666 666677777777777777776651 1111110 111333334666
Q ss_pred ccc--CCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCcc-Ccc-cCCccccCCC-------CccEEecCCCcccee
Q 043136 217 QLG--LLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACN-LSG-TLPSEISNLT-------KLEMLLLFKNHFTGE 285 (902)
Q Consensus 217 ~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~ 285 (902)
.++ .+++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ 562 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-E 562 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-B
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-c
Confidence 655 66666666666666666666666666666666666666 666 5665555444 6777777777776 5
Q ss_pred cCC--CCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccc-cceEEecCceeccccCccc
Q 043136 286 IPV--SYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLAD-LDTLLLWNNHLTGVLPQKL 362 (902)
Q Consensus 286 ~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~ 362 (902)
+|. .++++++|+.|+|++|+++ .+| .|..+++|+.|+|++|++. .+|..+..+++ |+.|+|++|+++ .+|..+
T Consensus 563 ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~ 638 (876)
T 4ecn_A 563 FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIF 638 (876)
T ss_dssp CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCC
T ss_pred cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhh
Confidence 666 6666777777777777776 556 6666777777777777766 66666666666 777777777776 556666
Q ss_pred cCCCc--eeEEEecCCcccCCCCCCcc-----CCCCccEEeccCCcCcccccccc-cccCCCcEEEccCCccCCCCCccc
Q 043136 363 GSNGK--LLTVDVSSNSLTGPIPPTIC-----DGDRLFKLILFSNNFTYSIPENL-VNCSSLSRLRIQDNQLNGSIPQGF 434 (902)
Q Consensus 363 ~~~~~--L~~L~Ls~N~l~~~~p~~~~-----~~~~L~~L~l~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~ 434 (902)
..... |+.|++++|+++|.+|...+ .+.+|+.|++++|+++ .+|..+ ..+++|+.|+|++|+|+ .+|..+
T Consensus 639 ~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 716 (876)
T 4ecn_A 639 NAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENS 716 (876)
T ss_dssp CTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTS
T ss_pred hccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHH
Confidence 55543 77888888888776553321 2336677777777777 444443 46777777777777777 555544
Q ss_pred CCC--------CCCcEEEccCcccCCCCCCcCc--ccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCccc
Q 043136 435 GLL--------PNLTFMDMSRNSLSGEIPRDLG--NAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPD 504 (902)
Q Consensus 435 ~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 504 (902)
... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 332 26777777777777 5666665 67777777777777765 67777777777777777765
Q ss_pred ccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccce
Q 043136 505 FIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLE 584 (902)
Q Consensus 505 ~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~ 584 (902)
++++|++.+.+|..++.+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+.
T Consensus 788 ----------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~ 854 (876)
T 4ecn_A 788 ----------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAG 854 (876)
T ss_dssp ----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTT
T ss_pred ----------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccch
Confidence 4566777788888888888888888888888 57777665 5788888888887766666665555566
Q ss_pred eecccCCcc
Q 043136 585 SFNVSYNLL 593 (902)
Q Consensus 585 ~l~ls~N~l 593 (902)
.+.|++|++
T Consensus 855 ~~~L~~n~~ 863 (876)
T 4ecn_A 855 MYVLLYDKT 863 (876)
T ss_dssp CCEEECCTT
T ss_pred heeecCCCc
Confidence 666666654
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9e-60 Score=564.58 Aligned_cols=494 Identities=20% Similarity=0.196 Sum_probs=451.4
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecc
Q 043136 78 SQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNA 157 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 157 (902)
..++.|+|++|.+++..|..|+.+++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 57999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc--EEEeeCcccC
Q 043136 158 YSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE--RIEIGYNNLQ 235 (902)
Q Consensus 158 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~ 235 (902)
++|++++..|..|+++++|++|+|++|++++..++.+..+++|++|+|++|++++..|..|+.+++|+ +|++++|+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999998888999999999999999999986555566699999999999999988888999999999 9999999999
Q ss_pred CCCChhccCCCCCCEEEccCccCc--------------------------ccCCccccCCC--CccEEecCCCccceecC
Q 043136 236 GEVPVEFASLVNLKYMDISACNLS--------------------------GTLPSEISNLT--KLEMLLLFKNHFTGEIP 287 (902)
Q Consensus 236 ~~~p~~~~~l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~l~--~L~~L~L~~N~l~~~~p 287 (902)
+..|..|.. .+|++|++++|... ...+..+..+. +|++|++++|++++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 888877665 68999999987511 11122333333 79999999999998888
Q ss_pred CCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCc-cccCCC
Q 043136 288 VSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQ-KLGSNG 366 (902)
Q Consensus 288 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~~ 366 (902)
..|+.+++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 88999999999999999998 7888999999999999999999988898999999999999999999876655 589999
Q ss_pred ceeEEEecCCcccCCC--CCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCc-ccCCCCCCcEE
Q 043136 367 KLLTVDVSSNSLTGPI--PPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQ-GFGLLPNLTFM 443 (902)
Q Consensus 367 ~L~~L~Ls~N~l~~~~--p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L 443 (902)
+|+.|++++|++++.. |..+..+++|++|++++|++.+..|..+..+++|+.|++++|++++..|. .|..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999999876 88899999999999999999999999999999999999999999987665 49999999999
Q ss_pred EccCcccCCCCCCcCcccCcCceecccccccCCC---cChhhhcccccceeccCCCccCCCcccccc-cccccEEeccCc
Q 043136 444 DMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTS---LPSNIWSAPNLKILSASSSKLTGKIPDFIG-CKSIYKIELHNN 519 (902)
Q Consensus 444 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~~~l~~l~Ls~N 519 (902)
++++|.+++..|..+..+++|++|++++|++.+. .+..+..+++|+.|++++|++++.+|..++ +++|+.|+|++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 9999999999999999999999999999999863 346799999999999999999998887655 999999999999
Q ss_pred cccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCC
Q 043136 520 LLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIP 574 (902)
Q Consensus 520 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 574 (902)
++++.+|..+..++.| .|+|++|++++.+|..++.+++|+.|+|++|.+++..+
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999 99999999999999999999999999999999997544
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-59 Score=563.97 Aligned_cols=510 Identities=20% Similarity=0.212 Sum_probs=338.6
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecc
Q 043136 78 SQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNA 157 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 157 (902)
.+++.|+|++|.+++..+..|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 35666677766666666666666667777777766666666666666667777777766666666666666666777777
Q ss_pred ccccccCCCchhhhcccCCcEEeccCccCcC-CCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc----EEEeeCc
Q 043136 158 YSNSFTGPLPLEFVQLNSLQQLNLGGSYFDG-EIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE----RIEIGYN 232 (902)
Q Consensus 158 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~~N 232 (902)
++|.+++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 7666666666666666667777776666664 4566666666677777776666666666666555544 5666666
Q ss_pred ccCCCCChhccCCCCCCEEEccCccCc-ccCCccccCCCCccEEecCCCcccee------cCCCCCCcC--cCcEEec-c
Q 043136 233 NLQGEVPVEFASLVNLKYMDISACNLS-GTLPSEISNLTKLEMLLLFKNHFTGE------IPVSYGNLQ--ALQVLDL-S 302 (902)
Q Consensus 233 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~------~p~~~~~l~--~L~~L~L-s 302 (902)
++++..+..+... +|++|++++|.++ +.+|..+.++++|+.+++..+.+.+. .+..+..+. .++.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 6665555444443 6666666666665 34455666666666666654443321 011111111 3455555 6
Q ss_pred cCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCC
Q 043136 303 DNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPI 382 (902)
Q Consensus 303 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 382 (902)
.|.+++.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|++ +.+| .+ .+++|+.|++++|+..+.+
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch
Confidence 6667666666 777777777777777774 344 666677777777777777 4555 33 6777777777777554433
Q ss_pred CCCccCCCCccEEeccCCcCccc--ccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCC-CcCc
Q 043136 383 PPTICDGDRLFKLILFSNNFTYS--IPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIP-RDLG 459 (902)
Q Consensus 383 p~~~~~~~~L~~L~l~~N~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~ 459 (902)
.+..+++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..|..+++|+.|++++|++++..| ..+.
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 455667777777777777655 36667777777777777777764 55677777777777777777776666 5677
Q ss_pred ccCcCceecccccccCCCcChhhhcccccceeccCCCccCCC-cccccc-cccccEEeccCccccccCCccccccccceE
Q 043136 460 NAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGK-IPDFIG-CKSIYKIELHNNLLNGSIPWDIGHCEKLLL 537 (902)
Q Consensus 460 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~-~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~ 537 (902)
++++|++|++++|++.+.+|..+..+++|++|++++|++++. +|..++ +++|+.|+|++|++++.+|..++.+++|+.
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 777777777777777777777777777777777777777763 455443 677777777777777777777777777777
Q ss_pred EEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCc-cceeecccCCcccccCC
Q 043136 538 LNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCS-TLESFNVSYNLLTGPIP 598 (902)
Q Consensus 538 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~-~L~~l~ls~N~l~g~ip 598 (902)
|+|++|++++.+|..++++++|++|||++|+++ .+|..+..++ +|++|++++|++.+..|
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 777777777777777777777777777777777 5666677665 47777777777766544
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-58 Score=566.43 Aligned_cols=523 Identities=22% Similarity=0.242 Sum_probs=461.8
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCC-Ccccccccccceeccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTF-PPGISKLRFLRIFNAYSN 160 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N 160 (902)
..|.++++++ .+|. ..++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3455677777 4565 5689999999999999999999999999999999999777766 778999999999999999
Q ss_pred cccCCCchhhhcccCCcEEeccCccCcCCCCcc--cCCCCCCCEEEccCCCccCCCC-ccccCCCCCcEEEeeCcccCCC
Q 043136 161 SFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSD--YRNLSSLRFLDLAGNSLTGSLP-PQLGLLTQLERIEIGYNNLQGE 237 (902)
Q Consensus 161 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~ 237 (902)
++++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999997755 5799999999999999999999
Q ss_pred CChhccCC--CCCCEEEccCccCcccCCccccCCCC------ccEEecCCCccceecCCCCCCc---CcCcEEeccc---
Q 043136 238 VPVEFASL--VNLKYMDISACNLSGTLPSEISNLTK------LEMLLLFKNHFTGEIPVSYGNL---QALQVLDLSD--- 303 (902)
Q Consensus 238 ~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~--- 303 (902)
.|..|..+ ++|++|+|++|.+.+..|..+..+++ |++|++++|.+++..+..+... ++++.|.++.
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999888 89999999999999988887777766 9999999999998888776543 6788888873
Q ss_pred ------CCCccccCcccccc--CCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecC
Q 043136 304 ------NQLSGPIPASLASL--KGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSS 375 (902)
Q Consensus 304 ------N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~ 375 (902)
|.+.+..+..|..+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 44444555566665 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCC
Q 043136 376 NSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIP 455 (902)
Q Consensus 376 N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 455 (902)
|++++..|..+..+++|+.|++++|++.+..+..|.++++|+.|+|++|.+++ ++ .+++|+.|++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcc-ccc
Confidence 99999999999999999999999999998888899999999999999999984 33 3899999999999999 556
Q ss_pred CcCcccCcCceecccccccCCCc-ChhhhcccccceeccCCCccCCCccc--ccccccccEEeccCcccc-----ccCCc
Q 043136 456 RDLGNAQKLEYLNISENSFQTSL-PSNIWSAPNLKILSASSSKLTGKIPD--FIGCKSIYKIELHNNLLN-----GSIPW 527 (902)
Q Consensus 456 ~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~~~l~~l~Ls~N~l~-----g~ip~ 527 (902)
.. ..+++.|++++|++++.. +..+..+++|+.|++++|++++..+. ...+++|+.|+|++|.++ +..|.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 54 467999999999998643 33466899999999999999986654 334889999999999997 55567
Q ss_pred cccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCCCCCCcCcCC
Q 043136 528 DIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPASGTIFPNL 607 (902)
Q Consensus 528 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~~~~~~~ 607 (902)
.+..+++|+.|+|++|+|++.+|..|+++++|+.|||++|+|++..|..+. ++|+.|+|++|+|+|.+|.... .+
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L 549 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SL 549 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---Cc
Confidence 789999999999999999999999999999999999999999987777776 8999999999999999997633 34
Q ss_pred CCCcccCCcccCCCC
Q 043136 608 HPSSFIGNEGLCGRV 622 (902)
Q Consensus 608 ~~~~~~gn~~lcg~~ 622 (902)
....+.||+..|..+
T Consensus 550 ~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 550 SVLDITHNKFICECE 564 (844)
T ss_dssp CEEEEEEECCCCSSS
T ss_pred CEEEecCCCcccccc
Confidence 667789999998654
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.7e-58 Score=548.96 Aligned_cols=527 Identities=20% Similarity=0.197 Sum_probs=464.3
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNS 161 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 161 (902)
.++.++++++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4677788887 5676654 899999999999999999999999999999999999999889999999999999999999
Q ss_pred ccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccC-CCCccccCCCCCcEEEeeCcccCCCCCh
Q 043136 162 FTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTG-SLPPQLGLLTQLERIEIGYNNLQGEVPV 240 (902)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 240 (902)
+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999999999999999999999999998888899999999999999999986 5799999999999999999999998888
Q ss_pred hccCCCCCC----EEEccCccCcccCCccccCCCCccEEecCCCccc-eecCCCCCCcCcCcEEecccCCCcc------c
Q 043136 241 EFASLVNLK----YMDISACNLSGTLPSEISNLTKLEMLLLFKNHFT-GEIPVSYGNLQALQVLDLSDNQLSG------P 309 (902)
Q Consensus 241 ~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~------~ 309 (902)
.|+.+++|+ +|++++|.+++..+..+... +|++|++++|.+. +..|..+.+++.|+.+++..+.+.+ .
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 888877665 89999999997766666555 8999999999987 4667788899999999997766542 1
Q ss_pred cCccccccC--CCCEEEc-cCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCc
Q 043136 310 IPASLASLK--GLTRLSL-MNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTI 386 (902)
Q Consensus 310 ~p~~l~~l~--~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 386 (902)
.+..+..+. .++.+++ ..|.+.+.+|. +..+++|+.|++++|.++. +| .+..+++|+.|++++|++ +.+| .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC
Confidence 122222222 4667777 78888888887 9999999999999999975 45 888999999999999999 6888 44
Q ss_pred cCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCC--CCcccCCCCCCcEEEccCcccCCCCCCcCcccCcC
Q 043136 387 CDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGS--IPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKL 464 (902)
Q Consensus 387 ~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 464 (902)
.+++|+.|++++|+..+.+ .+..+++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8999999999999766544 677899999999999999976 48899999999999999999985 67899999999
Q ss_pred ceecccccccCCCcC-hhhhcccccceeccCCCccCCCcccccc-cccccEEeccCccccc-cCCccccccccceEEEee
Q 043136 465 EYLNISENSFQTSLP-SNIWSAPNLKILSASSSKLTGKIPDFIG-CKSIYKIELHNNLLNG-SIPWDIGHCEKLLLLNLS 541 (902)
Q Consensus 465 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~~~l~~l~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls 541 (902)
+.|++++|++.+..| ..+..+++|+.|++++|++++.+|..++ +++|+.|++++|.+++ .+|..++.+++|+.|+|+
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 999999999998888 7899999999999999999998887665 9999999999999998 489999999999999999
Q ss_pred CCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCCCCCCcCc-CCCCCcccCCcccCC
Q 043136 542 RNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPASGTIFP-NLHPSSFIGNEGLCG 620 (902)
Q Consensus 542 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~~~~~-~~~~~~~~gn~~lcg 620 (902)
+|++++.+|..++++++|++|+|++|++++.+|..|.++++|++|++++|+++ .+|......+ .+......||+..|.
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999 5776533322 345567789988885
Q ss_pred CC
Q 043136 621 RV 622 (902)
Q Consensus 621 ~~ 622 (902)
.+
T Consensus 561 c~ 562 (606)
T 3vq2_A 561 CE 562 (606)
T ss_dssp ST
T ss_pred Cc
Confidence 44
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.6e-55 Score=517.33 Aligned_cols=493 Identities=19% Similarity=0.213 Sum_probs=366.5
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCc
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPP 144 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 144 (902)
.|.|.|| |+. ++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999999 854 455666 5677654 7999999999999999899999999999999999999998889
Q ss_pred ccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcC-CCCcccCCCCCCCEEEccCCCccCCCC-ccccCCC
Q 043136 145 GISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDG-EIPSDYRNLSSLRFLDLAGNSLTGSLP-PQLGLLT 222 (902)
Q Consensus 145 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 222 (902)
.|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++.+.+| ..|..++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 99999999999999999999888889999999999999999986 467788999999999999998544554 6789999
Q ss_pred CCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceec--C-CCCCCcCcCcEE
Q 043136 223 QLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEI--P-VSYGNLQALQVL 299 (902)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L 299 (902)
+|++|++++|++++..|..+..+++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 9999999999999888999999999999999999887433333456888888888888888642 2 123346777888
Q ss_pred ecccCCCccccCc----cccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecC
Q 043136 300 DLSDNQLSGPIPA----SLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSS 375 (902)
Q Consensus 300 ~Ls~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~ 375 (902)
++++|.+++..+. .+..+++|+.|++++|.+.+...-.. .....+..+.+|+.|++++
T Consensus 229 ~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------------~~~~~~~~l~~L~~L~l~~ 290 (549)
T 2z81_A 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP------------------SESDVVSELGKVETVTIRR 290 (549)
T ss_dssp EEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC------------------CTTTCCCCCTTCCEEEEES
T ss_pred eccccccchhHHHHHHHHhhhhccccccccccccccccccccc------------------cchhhhhhhcccccccccc
Confidence 8888777654433 33455666777777666654211000 0011223334444455544
Q ss_pred CcccCC-----CCCCccCCCCccEEeccCCcCcccccccc-cccCCCcEEEccCCccCCCCCc---ccCCCCCCcEEEcc
Q 043136 376 NSLTGP-----IPPTICDGDRLFKLILFSNNFTYSIPENL-VNCSSLSRLRIQDNQLNGSIPQ---GFGLLPNLTFMDMS 446 (902)
Q Consensus 376 N~l~~~-----~p~~~~~~~~L~~L~l~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls 446 (902)
+.+... ++..+....+|+.|++++|++. .+|..+ ..+++|++|++++|++++.+|. .++.+++|++|+|+
T Consensus 291 ~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls 369 (549)
T 2z81_A 291 LHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369 (549)
T ss_dssp CBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT
T ss_pred cccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc
Confidence 443321 1111122345666666666665 455554 4677777777777777765542 36677777777777
Q ss_pred CcccCCCCC--CcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCcccccccccccEEeccCcccccc
Q 043136 447 RNSLSGEIP--RDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGS 524 (902)
Q Consensus 447 ~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ 524 (902)
+|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++. |..+ .++|+.|||++|++++.
T Consensus 370 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~-~~~L~~L~Ls~N~l~~~ 446 (549)
T 2z81_A 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI-PQTLEVLDVSNNNLDSF 446 (549)
T ss_dssp TSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS-CTTCSEEECCSSCCSCC
T ss_pred CCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh-cCCceEEECCCCChhhh
Confidence 777775432 44677777777788877776 5677777777788888888877642 2222 25788888888888864
Q ss_pred CCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCCC
Q 043136 525 IPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPA 599 (902)
Q Consensus 525 ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~ 599 (902)
+ +.+++|+.|+|++|+|+ .+|. .+.+++|++|||++|++++.+|..|.++++|+.|++++|++++..|.
T Consensus 447 ~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 447 S----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp C----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred c----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 3 57889999999999998 5665 56789999999999999988888899999999999999999988874
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-54 Score=513.81 Aligned_cols=491 Identities=19% Similarity=0.185 Sum_probs=361.8
Q ss_pred CCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEec
Q 043136 102 TSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNL 181 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 181 (902)
+++++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 45667777777776666666677777777777777766666666667777777777777766666666777777777777
Q ss_pred cCccCcCCCCcccCCCCCCCEEEccCCCccC-CCCccccCCCCCcEEEeeCcccCCCCChhccCCCCC----CEEEccCc
Q 043136 182 GGSYFDGEIPSDYRNLSSLRFLDLAGNSLTG-SLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNL----KYMDISAC 256 (902)
Q Consensus 182 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~N 256 (902)
++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 7777665555456677777777777777665 356667777777777777777766666666666666 66777777
Q ss_pred cCcccCCccccCCCCccEEecCCCccce-ecCCCCCCcCcCcEEecccCCC------ccccCccccccCC--CCEEEccC
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTG-EIPVSYGNLQALQVLDLSDNQL------SGPIPASLASLKG--LTRLSLMN 327 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l------~~~~p~~l~~l~~--L~~L~L~~ 327 (902)
.+++..|..+..+ +|++|++++|.... .++..+..++.++.+.+.-+.+ .......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 7776666655544 57777776664321 2233344455555544433222 1122223333332 46667777
Q ss_pred c-cccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccc
Q 043136 328 N-VLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSI 406 (902)
Q Consensus 328 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~ 406 (902)
| .+.+.+|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|+++ .+|. ..+++|+.|++.+|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 6 667777777888888888888888887 466667777 8888888888887 4554 45677888888888877666
Q ss_pred cccccccCCCcEEEccCCccCCCC--CcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcC-hhhh
Q 043136 407 PENLVNCSSLSRLRIQDNQLNGSI--PQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLP-SNIW 483 (902)
Q Consensus 407 p~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~ 483 (902)
+. ..+++|++|++++|++++.. |..+..+++|++|++++|++++..+. +..+++|+.|++++|.+.+..| ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 55 67788888888888887544 67788888888888888888865444 8888888888888888877665 5678
Q ss_pred cccccceeccCCCccCCCcccccc-cccccEEeccCcccc-ccCCccccccccceEEEeeCCcceecCCCCCCCCCcccE
Q 043136 484 SAPNLKILSASSSKLTGKIPDFIG-CKSIYKIELHNNLLN-GSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITD 561 (902)
Q Consensus 484 ~l~~L~~L~ls~N~l~~~~p~~~~-~~~l~~l~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 561 (902)
.+++|++|++++|++++.+|..++ +++|+.|+|++|.++ +.+|..++.+++|+.|+|++|++++.+|..++.+++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 888888888888888887776554 889999999999987 689999999999999999999999999999999999999
Q ss_pred EEccCCcccccCCCCCcCCccceeecccCCcccccCCCCC
Q 043136 562 VDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPASG 601 (902)
Q Consensus 562 L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~ 601 (902)
|+|++|++++.+|..|.++++|+.|++++|+++|.+|...
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999999999888899999999999999999999988753
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=507.14 Aligned_cols=501 Identities=19% Similarity=0.195 Sum_probs=440.1
Q ss_pred CccccEEecCC--CCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 66 CSWSGIKCNPK--SSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 66 C~w~Gv~c~~~--~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
|++.|.+-.+. +.+++.|+|++|.+++..+.+|+.+++|++|+|++|++++..+.+|.++++|++|+|++|++++..|
T Consensus 14 c~~~~l~~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (570)
T 2z63_A 14 CMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 93 (570)
T ss_dssp CCSSCCSSCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred eCCCCccccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCH
Confidence 44444433332 3579999999999999888899999999999999999999888999999999999999999999888
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcC-CCCcccCCCCCCCEEEccCCCccCCCCccccCCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDG-EIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLT 222 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 222 (902)
..|+.+++|++|++++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.++
T Consensus 94 ~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 173 (570)
T 2z63_A 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173 (570)
T ss_dssp TTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHH
T ss_pred hhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchh
Confidence 999999999999999999998877789999999999999999987 4799999999999999999999988888899999
Q ss_pred CC----cEEEeeCcccCCCCChhccCCCCCCEEEccCccCcc-cCCccccCCCCccEEecCCCcc------ceecCCCCC
Q 043136 223 QL----ERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSG-TLPSEISNLTKLEMLLLFKNHF------TGEIPVSYG 291 (902)
Q Consensus 223 ~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l------~~~~p~~~~ 291 (902)
+| ++|++++|.+++..|..|... +|++|++++|.... .++..+..+++++.+.+..+.+ .......+.
T Consensus 174 ~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~ 252 (570)
T 2z63_A 174 QMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE 252 (570)
T ss_dssp TCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTG
T ss_pred ccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhc
Confidence 98 899999999999888888776 89999999986542 3456677888888777654433 222233344
Q ss_pred CcC--cCcEEecccC-CCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCce
Q 043136 292 NLQ--ALQVLDLSDN-QLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKL 368 (902)
Q Consensus 292 ~l~--~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 368 (902)
.++ .++.+++++| .+.+.+|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.++ .+|. ..+++|
T Consensus 253 ~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L 327 (570)
T 2z63_A 253 GLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSL 327 (570)
T ss_dssp GGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSC
T ss_pred cccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--cccccc
Confidence 443 3578888888 788889999999999999999999997 588888888 9999999999998 4444 467899
Q ss_pred eEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccc--cccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEcc
Q 043136 369 LTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSI--PENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMS 446 (902)
Q Consensus 369 ~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 446 (902)
+.|++++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|++++|++++..+ .+..+++|+.|+++
T Consensus 328 ~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~ 404 (570)
T 2z63_A 328 KRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQ 404 (570)
T ss_dssp CEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECT
T ss_pred CEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEcc
Confidence 9999999999887766 77899999999999998764 7889999999999999999996544 49999999999999
Q ss_pred CcccCCCCC-CcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccC-CCcccccc-cccccEEeccCccccc
Q 043136 447 RNSLSGEIP-RDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLT-GKIPDFIG-CKSIYKIELHNNLLNG 523 (902)
Q Consensus 447 ~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~-~~~l~~l~Ls~N~l~g 523 (902)
+|++++..| ..+.++++|++|++++|.+.+..|..+..+++|+.|++++|+++ +.+|..++ +++|+.|+|++|++++
T Consensus 405 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~ 484 (570)
T 2z63_A 405 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484 (570)
T ss_dssp TSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCcccc
Confidence 999998776 57899999999999999999999999999999999999999998 56777655 9999999999999999
Q ss_pred cCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCC
Q 043136 524 SIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPS 575 (902)
Q Consensus 524 ~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~ 575 (902)
..|..++.+++|+.|+|++|++++.+|..++.+++|+.|++++|.+++..|.
T Consensus 485 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 485 LSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999999999999999999999999999999999999999999988774
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.6e-54 Score=515.53 Aligned_cols=457 Identities=18% Similarity=0.221 Sum_probs=307.6
Q ss_pred CCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCC------CC------CCCcccccccccceeccccccccCCCchh
Q 043136 102 TSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSF------NS------TFPPGISKLRFLRIFNAYSNSFTGPLPLE 169 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l------~~------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 169 (902)
.+++.|+|++|.++|.+|++|++|++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4788999999999999999999999999999999977 23 334333 56677 888888888887776
Q ss_pred hhc-ccCCcEEeccCccCcCCCCcccCCCCCCCEEEcc--CCCccCCCCccccCCCCCcEEEeeCcccCCC---------
Q 043136 170 FVQ-LNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLA--GNSLTGSLPPQLGLLTQLERIEIGYNNLQGE--------- 237 (902)
Q Consensus 170 ~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 237 (902)
+.. +..+..+++....+.. .....++.+.+. .|++++ +|..|+++++|++|+|++|+++|.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 663 3345555555443331 112233333333 578887 788888888888888888888875
Q ss_pred --------CChhcc--CCCCCCEEEccCccCcccCCccccCCCCccEEecCCCc-cce-ecCCCCCCc------CcCcEE
Q 043136 238 --------VPVEFA--SLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNH-FTG-EIPVSYGNL------QALQVL 299 (902)
Q Consensus 238 --------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L 299 (902)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 677766 77777777777777777777777777777777777776 776 666666655 677777
Q ss_pred ecccCCCccccCc--cccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCc-eeEEEecCC
Q 043136 300 DLSDNQLSGPIPA--SLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGK-LLTVDVSSN 376 (902)
Q Consensus 300 ~Ls~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~-L~~L~Ls~N 376 (902)
+|++|+++ .+|. .+..+++|++|++++|++.|.+| .+..+++|++|++++|+++ .+|..+..+++ |+.|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 77777776 5666 67777777777777777776677 6666777777777777776 55666666666 667777666
Q ss_pred cccCCCCCCccCCC--CccEEeccCCcCccccccccc-------ccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccC
Q 043136 377 SLTGPIPPTICDGD--RLFKLILFSNNFTYSIPENLV-------NCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSR 447 (902)
Q Consensus 377 ~l~~~~p~~~~~~~--~L~~L~l~~N~l~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 447 (902)
+++ .+|..+.... +|+.|++++|++++.+|..+. .+++|+.|+|++|++++..+..+..+++|++|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 666 5555554433 455555555555555555444 444455555555555422222233345555555555
Q ss_pred cccCCCCCCcCcc-cCcCceecccccccCCCcChhhhcccccceeccCCCccCCCcccc-c--ccccccEEeccCccccc
Q 043136 448 NSLSGEIPRDLGN-AQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDF-I--GCKSIYKIELHNNLLNG 523 (902)
Q Consensus 448 N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~--~~~~l~~l~Ls~N~l~g 523 (902)
|+++ .+|..+.. .. ..+.++++|+.|++++|+++ .+|.. . .+++|+.|+|++|++++
T Consensus 467 N~l~-~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 467 NMLT-EIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp SCCS-BCCSSSSEETT-----------------EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred CCCC-CcCHHHhcccc-----------------ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 5554 23322211 11 00011125556666666655 33332 2 45666666666777765
Q ss_pred cCCccccccccceEEEe------eCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccc
Q 043136 524 SIPWDIGHCEKLLLLNL------SRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTG 595 (902)
Q Consensus 524 ~ip~~~~~l~~L~~L~L------s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g 595 (902)
+|..++.+++|+.|+| ++|++.+.+|..++++++|++|||++|++ +.+|..+. ++|+.|+|++|++..
T Consensus 528 -ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp -CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred -cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 7777777777888877 67889999999999999999999999999 68998876 799999999998864
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.9e-52 Score=486.17 Aligned_cols=452 Identities=18% Similarity=0.219 Sum_probs=300.5
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNS 161 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 161 (902)
.||+++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5666777666 4555554 666666666666666666666666666666666666665555555555555555555555
Q ss_pred ccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccC-CCCccccCCCCCcEEEeeCcccCCCCCh
Q 043136 162 FTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTG-SLPPQLGLLTQLERIEIGYNNLQGEVPV 240 (902)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 240 (902)
++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|++++|+|++ .
T Consensus 81 l~-------------------------~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~ 130 (520)
T 2z7x_B 81 LV-------------------------KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---S 130 (520)
T ss_dssp CC-------------------------EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---G
T ss_pred ee-------------------------ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---h
Confidence 44 23333 45555555555555554 244555555555555555555553 2
Q ss_pred hccCCCCC--CEEEccCccC--cccCCccccCCC-CccEEecCCCccceecCC-CCCCcCcCcEEecccCC-------Cc
Q 043136 241 EFASLVNL--KYMDISACNL--SGTLPSEISNLT-KLEMLLLFKNHFTGEIPV-SYGNLQALQVLDLSDNQ-------LS 307 (902)
Q Consensus 241 ~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~ 307 (902)
.|..+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.
T Consensus 131 ~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 210 (520)
T 2z7x_B 131 SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFL 210 (520)
T ss_dssp GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHH
T ss_pred hccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceee
Confidence 34444445 6666666665 555555555544 233456666666654443 46677778888888876 66
Q ss_pred cccCccccccCCCCEEEccCccccccCChhhh---hccccceEEecCceeccccCccc-----cCCCceeEEEecCCccc
Q 043136 308 GPIPASLASLKGLTRLSLMNNVLFGEIPQDIE---LLADLDTLLLWNNHLTGVLPQKL-----GSNGKLLTVDVSSNSLT 379 (902)
Q Consensus 308 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~~~~-----~~~~~L~~L~Ls~N~l~ 379 (902)
+.+| .+..+++|+.|++++|.+.+..+..+. ..++|++|++++|+++|.+|..+ ..+++|+.+++++|.+
T Consensus 211 ~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~- 288 (520)
T 2z7x_B 211 SILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF- 288 (520)
T ss_dssp HHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-
T ss_pred cchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-
Confidence 6665 677788888888888777654433321 13467777777777777777666 6666666666666665
Q ss_pred CCCCCCccCCCCccEEeccCCcCccccccccccc---CCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCC
Q 043136 380 GPIPPTICDGDRLFKLILFSNNFTYSIPENLVNC---SSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPR 456 (902)
Q Consensus 380 ~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 456 (902)
.+|. ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|.
T Consensus 289 -~~p~-----------------------~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~ 342 (520)
T 2z7x_B 289 -GFPQ-----------------------SYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFE 342 (520)
T ss_dssp -CSCT-----------------------HHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTT
T ss_pred -ecch-----------------------hhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhh
Confidence 2331 223222 45777777777765321 125677788888888888777777
Q ss_pred cCcccCcCceecccccccCC--CcChhhhcccccceeccCCCccCCCccc--ccccccccEEeccCccccccCCcccccc
Q 043136 457 DLGNAQKLEYLNISENSFQT--SLPSNIWSAPNLKILSASSSKLTGKIPD--FIGCKSIYKIELHNNLLNGSIPWDIGHC 532 (902)
Q Consensus 457 ~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~~~l~~l~Ls~N~l~g~ip~~~~~l 532 (902)
.++++++|++|+|++|++++ .+|..+..+++|++|++++|++++.+|. +.++++|+.|++++|++++.+|..+.
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 77778888888888888775 4567777888888888888888875554 34478888888888888888887765
Q ss_pred ccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCC-CcCCccceeecccCCcccccCC
Q 043136 533 EKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSN-FENCSTLESFNVSYNLLTGPIP 598 (902)
Q Consensus 533 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~l~~L~~l~ls~N~l~g~ip 598 (902)
++|+.|+|++|+++ .+|..+..+++|++|||++|+++ .+|.. |..+++|++|++++|++++..+
T Consensus 421 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 78899999999998 67777779999999999999998 56665 8889999999999999987655
No 18
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=484.82 Aligned_cols=455 Identities=19% Similarity=0.216 Sum_probs=369.8
Q ss_pred cEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCC
Q 043136 129 RTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGN 208 (902)
Q Consensus 129 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 208 (902)
++||+++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46777777777 3666555 77888888888888888889999999999999999999888999999999999999999
Q ss_pred CccCCCCccccCCCCCcEEEeeCcccCC-CCChhccCCCCCCEEEccCccCcccCCccccCCCCc--cEEecCCCcc--c
Q 043136 209 SLTGSLPPQLGLLTQLERIEIGYNNLQG-EVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKL--EMLLLFKNHF--T 283 (902)
Q Consensus 209 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 283 (902)
+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 56666 89999999999999997 478999999999999999999986 457777888 9999999999 7
Q ss_pred eecCCCCCCcC-cCcEEecccCCCccccCc-cccccCCCCEEEccCcc-------ccccCChhhhhccccceEEecCcee
Q 043136 284 GEIPVSYGNLQ-ALQVLDLSDNQLSGPIPA-SLASLKGLTRLSLMNNV-------LFGEIPQDIELLADLDTLLLWNNHL 354 (902)
Q Consensus 284 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~L~~N~l 354 (902)
+..|..+..+. ....+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 78888887765 455678888988776554 67788899999999887 666665 677888888888888888
Q ss_pred ccccCcccc---CCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCC
Q 043136 355 TGVLPQKLG---SNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIP 431 (902)
Q Consensus 355 ~~~~~~~~~---~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 431 (902)
++..+..+. ..++|+.|++++|+++|.+|..+.... ...+++|+.+++++|.+ .+|
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~-------------------~~~l~~L~~l~l~~n~~--~~p 291 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS-------------------GTSLKALSIHQVVSDVF--GFP 291 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCC-------------------SCCCCEEEEEEEEECCC--CSC
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcc-------------------cccCceeEeccccccce--ecc
Confidence 764332221 134666666666666665555442210 16788899999999999 466
Q ss_pred -cccCCC---CCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccCC--Ccccc
Q 043136 432 -QGFGLL---PNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTG--KIPDF 505 (902)
Q Consensus 432 -~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~ 505 (902)
.++..+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|.++..+++|+.|++++|++++ .+|..
T Consensus 292 ~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 369 (520)
T 2z7x_B 292 QSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM 369 (520)
T ss_dssp THHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH
T ss_pred hhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH
Confidence 555555 78999999999987532 23688999999999999999999999999999999999999997 45554
Q ss_pred c-ccccccEEeccCccccccCCcc-ccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccc
Q 043136 506 I-GCKSIYKIELHNNLLNGSIPWD-IGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTL 583 (902)
Q Consensus 506 ~-~~~~l~~l~Ls~N~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L 583 (902)
+ .+++|+.|+|++|.+++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+.|||++|+++ .+|..+..+++|
T Consensus 370 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L 446 (520)
T 2z7x_B 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL 446 (520)
T ss_dssp HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCC
Confidence 4 4899999999999999878875 88899999999999999999888775 79999999999999 899988899999
Q ss_pred eeecccCCcccccCCCC-CCcCcCCCCCcccCCcccCC
Q 043136 584 ESFNVSYNLLTGPIPAS-GTIFPNLHPSSFIGNEGLCG 620 (902)
Q Consensus 584 ~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~gn~~lcg 620 (902)
++|++++|+++ .+|.. ....+.+......+|+--|.
T Consensus 447 ~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 447 QELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 99999999999 46764 33334455666788887774
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-51 Score=487.03 Aligned_cols=475 Identities=20% Similarity=0.224 Sum_probs=369.3
Q ss_pred CccccEEecCC--CCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 66 CSWSGIKCNPK--SSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 66 C~w~Gv~c~~~--~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
|++.+++.-+. ..+++.|+|++|++++..|..|+.+++|++|+|++|++++..|.+|+++++|++|+|++|++++..|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 56667766554 3589999999999999989999999999999999999999999999999999999999999999888
Q ss_pred cccccccccceeccccccccC-CCchhhhcccCCcEEeccCccCcCCCC-cccCCCCCCCEEEccCCCccCCCCccccCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTG-PLPLEFVQLNSLQQLNLGGSYFDGEIP-SDYRNLSSLRFLDLAGNSLTGSLPPQLGLL 221 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 221 (902)
..|+++++|++|++++|.+++ ..|..|+++++|++|+|++|.+.+.+| ..|.++++|++|++++|++++.+|..++.+
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 889999999999999999997 467899999999999999999555555 689999999999999999999999999999
Q ss_pred CCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccC--C-ccccCCCCccEEecCCCccceecC----CCCCCcC
Q 043136 222 TQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTL--P-SEISNLTKLEMLLLFKNHFTGEIP----VSYGNLQ 294 (902)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~ 294 (902)
++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+ ..+..++
T Consensus 172 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~ 251 (549)
T 2z81_A 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL 251 (549)
T ss_dssp SEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCT
T ss_pred ccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhc
Confidence 99999999999997443344567999999999999999752 2 233567899999999999987544 3456788
Q ss_pred cCcEEecccCCCcccc------CccccccCCCCEEEccCcccccc-----CChhhhhccccceEEecCceeccccCcccc
Q 043136 295 ALQVLDLSDNQLSGPI------PASLASLKGLTRLSLMNNVLFGE-----IPQDIELLADLDTLLLWNNHLTGVLPQKLG 363 (902)
Q Consensus 295 ~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~L~~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 363 (902)
+|+.|++++|.+.+.. ...+..+.+|+.|++.++.+... ++..+....+|+.|++++|+++
T Consensus 252 ~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-------- 323 (549)
T 2z81_A 252 ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-------- 323 (549)
T ss_dssp TCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC--------
T ss_pred cccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc--------
Confidence 9999999999987632 12345667778888877765421 1222233344555555555554
Q ss_pred CCCceeEEEecCCcccCCCCCCc-cCCCCccEEeccCCcCccccc---ccccccCCCcEEEccCCccCCCCC--cccCCC
Q 043136 364 SNGKLLTVDVSSNSLTGPIPPTI-CDGDRLFKLILFSNNFTYSIP---ENLVNCSSLSRLRIQDNQLNGSIP--QGFGLL 437 (902)
Q Consensus 364 ~~~~L~~L~Ls~N~l~~~~p~~~-~~~~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l 437 (902)
.+|..+ ..+++|++|++++|++++.+| ..+..+++|+.|+|++|++++..+ ..+..+
T Consensus 324 -----------------~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 324 -----------------LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp -----------------CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred -----------------cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 333333 234445555555555554443 235566777777777777764322 346677
Q ss_pred CCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCcccccccccccEEecc
Q 043136 438 PNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGCKSIYKIELH 517 (902)
Q Consensus 438 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls 517 (902)
++|++|||++|+++ .+|..+..+++|++|++++|++++ +|..+ .++|++|++++|++++.+ .++++|++|+|+
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls 459 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS---LFLPRLQELYIS 459 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC---CCCTTCCEEECC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc---ccCChhcEEECC
Confidence 77777777777777 567777777777777777777753 44433 257888888888887653 247788999999
Q ss_pred CccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCC
Q 043136 518 NNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIP 574 (902)
Q Consensus 518 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 574 (902)
+|+++ .+|. .+.+++|+.|+|++|+|++.+|..++.+++|+.|||++|.+++..|
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99997 7776 5789999999999999999999999999999999999999987665
No 20
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.2e-49 Score=477.00 Aligned_cols=483 Identities=19% Similarity=0.190 Sum_probs=267.4
Q ss_pred CCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEecc
Q 043136 103 SLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLG 182 (902)
Q Consensus 103 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 182 (902)
++++|||++|+|++..+.+|.++++|++|||++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCcCCCCcccCCCCCCCEEEccCCCccC-CCCccccCCCCCcEEEeeCcccCCCCChhccCCCCC----CEEEccCcc
Q 043136 183 GSYFDGEIPSDYRNLSSLRFLDLAGNSLTG-SLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNL----KYMDISACN 257 (902)
Q Consensus 183 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~Ls~N~ 257 (902)
+|++++..+..|+++++|++|+|++|++++ .+|..++.+++|++|++++|+|++..|..|..+.++ ..++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 555555444555555555555555555543 234555555555555555555555555555443332 245555555
Q ss_pred CcccCCccccCCCCccEEecCCCccce-------------------------------ecCCCCCCcCcCcEEecccCCC
Q 043136 258 LSGTLPSEISNLTKLEMLLLFKNHFTG-------------------------------EIPVSYGNLQALQVLDLSDNQL 306 (902)
Q Consensus 258 l~~~~p~~~~~l~~L~~L~L~~N~l~~-------------------------------~~p~~~~~l~~L~~L~Ls~N~l 306 (902)
++...+..+ ....++.+++.+|.... .....+..+..+..+++..+..
T Consensus 213 l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 213 MNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred ccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence 554333322 22334445555543321 1122233333344444433322
Q ss_pred c---cccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCC
Q 043136 307 S---GPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIP 383 (902)
Q Consensus 307 ~---~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p 383 (902)
. ..++..+..+.+++.+++.+|.+... ..+.....|+.|++.+|.+.+..+. .+..|+.++++.|.+...
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~-- 364 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA-- 364 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--
T ss_pred cccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--
Confidence 1 12233444555666666666655432 2244455566666666666544332 234555666666655432
Q ss_pred CCccCCCCccEEeccCCcCcc--cccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCC-CcCcc
Q 043136 384 PTICDGDRLFKLILFSNNFTY--SIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIP-RDLGN 460 (902)
Q Consensus 384 ~~~~~~~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 460 (902)
....++++|+.++++.|.+.. ..+..+..+.+|+.|+++.|.+.+ ++..+..+++|+.+++++|+.....+ ..|..
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~ 443 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 443 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTT
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccc
Confidence 223355666666666666543 334445555666666666666653 44456666666666666665554433 34556
Q ss_pred cCcCceecccccccCCCcChhhhcccccceeccCCCccCC-Ccccccc-cccccEEeccCccccccCCccccccccceEE
Q 043136 461 AQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTG-KIPDFIG-CKSIYKIELHNNLLNGSIPWDIGHCEKLLLL 538 (902)
Q Consensus 461 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~-~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L 538 (902)
+++++.++++.|.+.+..|..+..++.|+.|++++|++.. .+|+.+. +++|+.|||++|+|++.+|..|+.+++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 6666666666666666666666666666666666665332 3344333 5666666666666666666666666666666
Q ss_pred EeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCC-ccceeecccCCccc
Q 043136 539 NLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENC-STLESFNVSYNLLT 594 (902)
Q Consensus 539 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-~~L~~l~ls~N~l~ 594 (902)
+|++|+|++++|..|+++++|++|||++|+|++.+|..|..+ ++|++|+|++|++.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 666666666666666666666666666666666666666665 45666666666664
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-50 Score=490.45 Aligned_cols=371 Identities=19% Similarity=0.238 Sum_probs=256.3
Q ss_pred CCccCCCCccccCCCCCcEEEeeCcccCCC-CChhccCCCCCCEEEccCccCcccCCcccc--CCCCccEEecCCCccce
Q 043136 208 NSLTGSLPPQLGLLTQLERIEIGYNNLQGE-VPVEFASLVNLKYMDISACNLSGTLPSEIS--NLTKLEMLLLFKNHFTG 284 (902)
Q Consensus 208 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~ 284 (902)
|++++ +|..|+++++|++|+|++|+|++. +|..+. .++.|.++|.+|..++ ++++|++|+|++|++.+
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~ 505 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DANSDYAKQYENEELSWSNLKDLTDVELYNCPNMT 505 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCC
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccccccccccCChhhhhccCCCCCEEECcCCCCCc
Confidence 55555 566666666666666666666551 111100 0111222234666655 66666666666666666
Q ss_pred ecCCCCCCcCcCcEEecccCC-Ccc-ccCccccccC-------CCCEEEccCccccccCCh--hhhhccccceEEecCce
Q 043136 285 EIPVSYGNLQALQVLDLSDNQ-LSG-PIPASLASLK-------GLTRLSLMNNVLFGEIPQ--DIELLADLDTLLLWNNH 353 (902)
Q Consensus 285 ~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~ 353 (902)
.+|..|+++++|++|+|++|+ ++| .+|..+..++ +|+.|+|++|.++ .+|. .+..+++|+.|+|++|+
T Consensus 506 ~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~ 584 (876)
T 4ecn_A 506 QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNK 584 (876)
T ss_dssp SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSC
T ss_pred cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCC
Confidence 666666666666666666666 666 5666555544 6777777777766 5666 66677777777777777
Q ss_pred eccccCccccCCCceeEEEecCCcccCCCCCCccCCCC-ccEEeccCCcCcccccccccccCC--CcEEEccCCccCCCC
Q 043136 354 LTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDR-LFKLILFSNNFTYSIPENLVNCSS--LSRLRIQDNQLNGSI 430 (902)
Q Consensus 354 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~-L~~L~l~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~ 430 (902)
++ .+| .|+.+++|+.|++++|+++ .+|..++.+++ |+.|++++|+++ .+|..+..++. |+.|+|++|+++|.+
T Consensus 585 l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~i 660 (876)
T 4ecn_A 585 VR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEG 660 (876)
T ss_dssp CC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTS
T ss_pred cc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcc
Confidence 76 555 6667777777777777777 66666777766 777777777776 66666665543 777777777777665
Q ss_pred Cccc---C--CCCCCcEEEccCcccCCCCCCcC-cccCcCceecccccccCCCcChhhhcc--------cccceeccCCC
Q 043136 431 PQGF---G--LLPNLTFMDMSRNSLSGEIPRDL-GNAQKLEYLNISENSFQTSLPSNIWSA--------PNLKILSASSS 496 (902)
Q Consensus 431 p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~ls~N 496 (902)
|... + .+++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|
T Consensus 661 p~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N 738 (876)
T 4ecn_A 661 RNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFN 738 (876)
T ss_dssp SSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSS
T ss_pred ccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCC
Confidence 5322 2 2347777777777777 445443 46777777777777776 555554432 37888888888
Q ss_pred ccCCCccccc---ccccccEEeccCccccccCCccccccccceEEEeeC------CcceecCCCCCCCCCcccEEEccCC
Q 043136 497 KLTGKIPDFI---GCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSR------NSLTGIIPWEISGLPSITDVDLSHN 567 (902)
Q Consensus 497 ~l~~~~p~~~---~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~------N~l~g~~p~~~~~l~~L~~L~Ls~N 567 (902)
+++ .+|..+ .+++|+.|+|++|++++ +|..++.+++|+.|+|++ |++.+.+|..|+++++|+.|+|++|
T Consensus 739 ~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N 816 (876)
T 4ecn_A 739 KLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSN 816 (876)
T ss_dssp CCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSS
T ss_pred CCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCC
Confidence 887 455433 47888888888888886 788888888888888876 8899999999999999999999999
Q ss_pred cccccCCCCCcCCccceeecccCCcccccCCC
Q 043136 568 FLTGTIPSNFENCSTLESFNVSYNLLTGPIPA 599 (902)
Q Consensus 568 ~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~ 599 (902)
++ +.+|..+. ++|+.|+|++|++...-+.
T Consensus 817 ~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 817 DI-RKVDEKLT--PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp CC-CBCCSCCC--SSSCEEECCSCTTCEEECG
T ss_pred CC-CccCHhhc--CCCCEEECCCCCCCccChH
Confidence 99 79999876 5999999999999765443
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.2e-48 Score=458.54 Aligned_cols=458 Identities=17% Similarity=0.212 Sum_probs=334.8
Q ss_pred CCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEec
Q 043136 102 TSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNL 181 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 181 (902)
...+++++++|++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 345899999999986 666554 78999999999999888888899999999999999998888888888999999999
Q ss_pred cCccCcCCCCcccCCCCCCCEEEccCCCccC-CCCccccCCCCCcEEEeeCcccCCCCChhccCCCCC--CEEEccCccC
Q 043136 182 GGSYFDGEIPSDYRNLSSLRFLDLAGNSLTG-SLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNL--KYMDISACNL 258 (902)
Q Consensus 182 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l 258 (902)
++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999888 56655 78889999999998886 3467888888888888888888763 34444555 8888888888
Q ss_pred --cccCCccccCCC--CccEEecCCCccceecCC-CCCCcCcCcEEecccCCC-----ccccCccccccCCCCEEEccCc
Q 043136 259 --SGTLPSEISNLT--KLEMLLLFKNHFTGEIPV-SYGNLQALQVLDLSDNQL-----SGPIPASLASLKGLTRLSLMNN 328 (902)
Q Consensus 259 --~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l-----~~~~p~~l~~l~~L~~L~L~~N 328 (902)
++..|..+..+. .| .++++.|.+.+.++. .+..+++|+.|++++|+. .+. ...+..+++|+.|+++++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCC
Confidence 777777777654 33 557777777765543 355677777777777752 211 223555666666666665
Q ss_pred cccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCc-----cCCCCccEEeccCCcCc
Q 043136 329 VLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTI-----CDGDRLFKLILFSNNFT 403 (902)
Q Consensus 329 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~-----~~~~~L~~L~l~~N~l~ 403 (902)
.+.+.....+ .+ .+ ...+|++|++++|+++|.+|..+ ..+..|..+++..|.+
T Consensus 260 ~l~~~~~~~~-------------------~~-~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~- 317 (562)
T 3a79_B 260 ETTWKCSVKL-------------------FQ-FF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF- 317 (562)
T ss_dssp EECHHHHHHH-------------------HH-HH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-
T ss_pred cCcHHHHHHH-------------------HH-hh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-
Confidence 5543211111 00 11 11244455555555554444444 3444444444444444
Q ss_pred cccc-ccccc---cCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCC--C
Q 043136 404 YSIP-ENLVN---CSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQT--S 477 (902)
Q Consensus 404 ~~~p-~~l~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ 477 (902)
.+| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|++++.+|..++++++|++|+|++|++++ .
T Consensus 318 -~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 394 (562)
T 3a79_B 318 -LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK 394 (562)
T ss_dssp -SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTH
T ss_pred -ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCccc
Confidence 233 22222 256888888888876321 12678888888888888888888888888888889998888876 3
Q ss_pred cChhhhcccccceeccCCCccCCCccc--ccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCC
Q 043136 478 LPSNIWSAPNLKILSASSSKLTGKIPD--FIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISG 555 (902)
Q Consensus 478 ~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 555 (902)
+|..+..+++|+.|++++|++++.+|. +.++++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..
T Consensus 395 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~ 471 (562)
T 3a79_B 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTH 471 (562)
T ss_dssp HHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTS
T ss_pred chhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcC
Confidence 456788888999999999998885654 34488999999999999888887765 78999999999999 67777779
Q ss_pred CCcccEEEccCCcccccCCCC-CcCCccceeecccCCcccccCCC
Q 043136 556 LPSITDVDLSHNFLTGTIPSN-FENCSTLESFNVSYNLLTGPIPA 599 (902)
Q Consensus 556 l~~L~~L~Ls~N~l~g~ip~~-~~~l~~L~~l~ls~N~l~g~ip~ 599 (902)
+++|++|||++|+|+ .+|.. |..+++|++|++++|++.+..|.
T Consensus 472 l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 472 LQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 999999999999999 56665 99999999999999999987764
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.6e-48 Score=458.23 Aligned_cols=458 Identities=21% Similarity=0.219 Sum_probs=345.3
Q ss_pred EEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccc
Q 043136 80 ITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYS 159 (902)
Q Consensus 80 v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 159 (902)
.+.+|++++++++ +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3789999999995 787664 8999999999999998889999999999999999999999999999999999999999
Q ss_pred ccccCCCchhhhcccCCcEEeccCccCcC-CCCcccCCCCCCCEEEccCCCccCCCCccccCCCCC--cEEEeeCccc--
Q 043136 160 NSFTGPLPLEFVQLNSLQQLNLGGSYFDG-EIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQL--ERIEIGYNNL-- 234 (902)
Q Consensus 160 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 234 (902)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 45655 89999999999999997 4578999999999999999999863 45666666 9999999999
Q ss_pred CCCCChhccCCC-CCCEEEccCccCcccCCc-cccCCCCccEEecCCCc-----cceecCCCCCCcCcCcEEecccCCCc
Q 043136 235 QGEVPVEFASLV-NLKYMDISACNLSGTLPS-EISNLTKLEMLLLFKNH-----FTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 235 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
++..|..|..+. ..-.+++++|.+.+.++. .+.++++|+.|++++|+ +.+.+ ..+..+++|+.|+++++.++
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcCc
Confidence 889999988765 222678999999887664 56789999999999995 33222 34677889999999888776
Q ss_pred cccCcc---ccccCCCCEEEccCccccccCChhh-----hhccccceEEecCceeccccC-ccccCCCceeEEEecCCcc
Q 043136 308 GPIPAS---LASLKGLTRLSLMNNVLFGEIPQDI-----ELLADLDTLLLWNNHLTGVLP-QKLGSNGKLLTVDVSSNSL 378 (902)
Q Consensus 308 ~~~p~~---l~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l 378 (902)
+..... ....++|++|++++|.++|.+|..+ ..++.|+.++++.|.+ .+| ..+..+
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~------------- 327 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV------------- 327 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH-------------
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh-------------
Confidence 422111 1112366666666666666666554 4444444444444444 122 111111
Q ss_pred cCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCC--CCCC
Q 043136 379 TGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSG--EIPR 456 (902)
Q Consensus 379 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 456 (902)
....+++.|++++|.+.... ....+++|++|++++|++++.+|..++.+++|++|+|++|++++ .+|.
T Consensus 328 --------~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 397 (562)
T 3a79_B 328 --------FAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVAL 397 (562)
T ss_dssp --------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHH
T ss_pred --------hccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchh
Confidence 00123444444444443211 11456677777777777777777777777777777777777775 2345
Q ss_pred cCcccCcCceecccccccCCCcCh-hhhcccccceeccCCCccCCCcccccccccccEEeccCccccccCCccccccccc
Q 043136 457 DLGNAQKLEYLNISENSFQTSLPS-NIWSAPNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKL 535 (902)
Q Consensus 457 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L 535 (902)
.+.++++|++|++++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|
T Consensus 398 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 398 MTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 677777777777777777764444 466777888888888888776665544 68899999999997 789888899999
Q ss_pred eEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCC
Q 043136 536 LLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIP 574 (902)
Q Consensus 536 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 574 (902)
+.|+|++|+|+++.+..++.+++|+.|+|++|.+++..|
T Consensus 476 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 476 QELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 999999999996544459999999999999999997654
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-47 Score=458.48 Aligned_cols=485 Identities=20% Similarity=0.183 Sum_probs=408.6
Q ss_pred CCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecc
Q 043136 78 SQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNA 157 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 157 (902)
..++.|||++|+|++..+.+|.++++|++|||++|+|+++.+.+|.+|++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999888889999999999999999999988999999999999999999999888888999999999999
Q ss_pred ccccccCCCchhhhcccCCcEEeccCccCcC-CCCcccCCCCCCCEEEccCCCccCCCCccccCCCCC----cEEEeeCc
Q 043136 158 YSNSFTGPLPLEFVQLNSLQQLNLGGSYFDG-EIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQL----ERIEIGYN 232 (902)
Q Consensus 158 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N 232 (902)
++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..|..|..+.++ ..++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999999888899999999999999999976 467888999999999999999998888888776654 47889999
Q ss_pred ccCCCCChhccCCCCCCEEEccCccCcccC-Cccc------------------------------cCCCCccEEecCCCc
Q 043136 233 NLQGEVPVEFASLVNLKYMDISACNLSGTL-PSEI------------------------------SNLTKLEMLLLFKNH 281 (902)
Q Consensus 233 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~------------------------------~~l~~L~~L~L~~N~ 281 (902)
.++...+..+. ...++.+++++|..+..+ +..+ ..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 99866555544 345677888777554211 1222 223333344433332
Q ss_pred c---ceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceecccc
Q 043136 282 F---TGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVL 358 (902)
Q Consensus 282 l---~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 358 (902)
. ....+..+..+.+++.+++.+|.+.... .+.....|+.|++++|.+.+..+. .+..|+.+++.+|.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc
Confidence 2 2234455677889999999999987543 356678899999999998765443 4678899999999887543
Q ss_pred CccccCCCceeEEEecCCcccC--CCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCC-cccC
Q 043136 359 PQKLGSNGKLLTVDVSSNSLTG--PIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIP-QGFG 435 (902)
Q Consensus 359 ~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~ 435 (902)
....+++|+.+++++|.+.. ..+..+....+++++++..|.... ++..+..+++|+.++++.|+.....+ ..|.
T Consensus 366 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~ 442 (635)
T 4g8a_A 366 --SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 442 (635)
T ss_dssp --CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTT
T ss_pred --ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccc
Confidence 34578899999999999863 456667788899999999998874 56678889999999999998876554 5688
Q ss_pred CCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccC-CCcChhhhcccccceeccCCCccCCCcccccc-cccccE
Q 043136 436 LLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQ-TSLPSNIWSAPNLKILSASSSKLTGKIPDFIG-CKSIYK 513 (902)
Q Consensus 436 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~~~l~~ 513 (902)
.+++++.++++.|.+++..|..+..++.|+.|+|++|++. +.+|..+..+++|++|+|++|++++.+|..++ +++|++
T Consensus 443 ~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~ 522 (635)
T 4g8a_A 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 522 (635)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCE
Confidence 9999999999999999999999999999999999999854 56788999999999999999999998887654 999999
Q ss_pred EeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCC-CcccEEEccCCcccc
Q 043136 514 IELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGL-PSITDVDLSHNFLTG 571 (902)
Q Consensus 514 l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~Ls~N~l~g 571 (902)
|+|++|+|++..|..++.+++|+.|||++|+|++.+|..+..+ ++|+.|+|++|.++.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999999999999999999999999999999999999998 689999999999985
No 25
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.7e-46 Score=428.96 Aligned_cols=423 Identities=24% Similarity=0.290 Sum_probs=230.2
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
...++|++|++++|.+ |.+|.+|+++++|++|++++|.++|.+|..++++++|+.+++..+.. .++++
T Consensus 8 ~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~ 75 (454)
T 1jl5_A 8 VSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHE 75 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSE
T ss_pred cccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCE
Confidence 3467888888888888 78888888888888888888888888888888888887777766542 46788
Q ss_pred EeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccC
Q 043136 179 LNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNL 258 (902)
Q Consensus 179 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 258 (902)
|++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. |.. .++|++|++++|++
T Consensus 76 L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 76 LELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp EECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCC
T ss_pred EEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCC
Confidence 8888888875 3432 3678888888888886 6643 36788888888888753 221 15788888888888
Q ss_pred cccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhh
Q 043136 259 SGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDI 338 (902)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 338 (902)
++ +| .|.++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|..
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~- 213 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL- 213 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-
Confidence 75 66 47888888888888888875 45433 478888888888876 45 57778888888888888765 3432
Q ss_pred hhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcE
Q 043136 339 ELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSR 418 (902)
Q Consensus 339 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~ 418 (902)
.++|++|++++|+++ .+| .++.+++|+.|++++|++++ +|.. ..+|+.|++++|++++ +|.. +++|+.
T Consensus 214 --~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~ 281 (454)
T 1jl5_A 214 --PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTF 281 (454)
T ss_dssp --CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCE
T ss_pred --cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCE
Confidence 246777777777777 445 36777777777777777775 3332 2556666666666664 4432 256666
Q ss_pred EEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCcc
Q 043136 419 LRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKL 498 (902)
Q Consensus 419 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 498 (902)
|++++|++++ +|.. .++|++|++++|++++ ++.. .++|++|++++|++++ +|.. +++|+.|++++|++
T Consensus 282 L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 282 LDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHL 349 (454)
T ss_dssp EECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcc
Confidence 7777766664 2211 2466666666666664 2211 1356666666666654 4443 35566666666666
Q ss_pred CCCcccccccccccEEeccCccccc--cCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccc--cCC
Q 043136 499 TGKIPDFIGCKSIYKIELHNNLLNG--SIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTG--TIP 574 (902)
Q Consensus 499 ~~~~p~~~~~~~l~~l~Ls~N~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip 574 (902)
++ +|. .+++|+.|++++|++++ .+|.+++. |+.|++.|.+|.. +++|+.||+++|+++| .+|
T Consensus 350 ~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 350 AE-VPE--LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp SC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------------
T ss_pred cc-ccc--hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccch
Confidence 53 333 34566666666666665 55554432 2345555555542 3566666666666665 455
Q ss_pred CCCcCCccceeecccCCcccccCCC
Q 043136 575 SNFENCSTLESFNVSYNLLTGPIPA 599 (902)
Q Consensus 575 ~~~~~l~~L~~l~ls~N~l~g~ip~ 599 (902)
.+ |+.|.+.+|.+.+++|.
T Consensus 416 ~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 416 ES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -------------------------
T ss_pred hh------HhheeCcCcccCCcccc
Confidence 43 34445566666665554
No 26
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.9e-46 Score=405.83 Aligned_cols=294 Identities=29% Similarity=0.498 Sum_probs=216.3
Q ss_pred cCCChhhHHHHHHHHHhCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCc--cccEEecCCC--CCEEEEEcCCCCccc--c
Q 043136 20 ANTLPLPLVSLLSIKASLKDPFNNSFHDWDATPAFSNPSSEQEPVWCS--WSGIKCNPKS--SQITSLDLSRRSLSG--P 93 (902)
Q Consensus 20 ~~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~~~~~C~--w~Gv~c~~~~--~~v~~L~L~~~~l~g--~ 93 (902)
+.|.++|++||++||+++.+|. .+++|+.+ ++ ||. |.||+|+..+ ++|+.|+|++++++| .
T Consensus 1 ~~c~~~~~~aL~~~k~~~~~~~--~l~~W~~~------~~-----~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~ 67 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLGNPT--TLSSWLPT------TD-----CCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCG--GGTTCCTT------SC-----TTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEE
T ss_pred CCCCHHHHHHHHHHHHhcCCcc--cccCCCCC------CC-----CCcCCCcceEeCCCCCCceEEEEECCCCCccCCcc
Confidence 3699999999999999998775 58999754 23 888 9999998765 799999999999999 8
Q ss_pred cCccccCCCCCCEEEccC-CCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhc
Q 043136 94 IPPEIRYLTSLTHLNLSA-NAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQ 172 (902)
Q Consensus 94 ~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 172 (902)
+|+.|+.+++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|..|..
T Consensus 68 ~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred cChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 999999999999999995 9999889989999999999999999888888888888888888888888887777777777
Q ss_pred ccCCcEEeccCccCcCCCCcccCCCC-CCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEE
Q 043136 173 LNSLQQLNLGGSYFDGEIPSDYRNLS-SLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYM 251 (902)
Q Consensus 173 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 251 (902)
+++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..+..++ |++|++++|++++..|..|..+++|++|
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 226 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKI 226 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEE
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEE
Confidence 77777777777777777777777776 677777777777766666666665 6666666666666666666666666666
Q ss_pred EccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcc
Q 043136 252 DISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNV 329 (902)
Q Consensus 252 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 329 (902)
+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|+++|.+|.. ..+++|+.|++++|.
T Consensus 227 ~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 227 HLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp ECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 6666666644443 445555555555555555555555555555555555555555554443 444445555555544
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.6e-45 Score=419.51 Aligned_cols=406 Identities=24% Similarity=0.286 Sum_probs=279.5
Q ss_pred ccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEE
Q 043136 124 ELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFL 203 (902)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 203 (902)
+.+.|++|++++|.+ |.+|..++++++|++|++++|+++|.+|..++++++|+.+++..+.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 568999999999999 78999999999999999999999999999999999999888887643 578999
Q ss_pred EccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccc
Q 043136 204 DLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFT 283 (902)
Q Consensus 204 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 283 (902)
++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC
Confidence 999999996 5542 3789999999999997 6643 4789999999999985 3322 268999999999999
Q ss_pred eecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCcccc
Q 043136 284 GEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLG 363 (902)
Q Consensus 284 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 363 (902)
+ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 6 67 59999999999999999986 56543 589999999999987 56 58899999999999999986 34332
Q ss_pred CCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEE
Q 043136 364 SNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFM 443 (902)
Q Consensus 364 ~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 443 (902)
.+|+.|++++|+++ .+| .++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|
T Consensus 215 --~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 58899999999998 566 48888899999999998885 4543 3788999999999885 5653 4788999
Q ss_pred EccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcc-cccceeccCCCccCCCcccccccccccEEeccCcccc
Q 043136 444 DMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSA-PNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLN 522 (902)
Q Consensus 444 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~ 522 (902)
++++|++++ +|.. .++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++
T Consensus 283 ~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~--~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 283 DVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL--PPRLERLIASFNHLA 350 (454)
T ss_dssp ECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCS
T ss_pred ECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc--CCcCCEEECCCCccc
Confidence 999999886 2321 2578888999998875 33 23 478888888888886 5543 478888888888887
Q ss_pred ccCCccccccccceEEEeeCCccee--cCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccc--cCC
Q 043136 523 GSIPWDIGHCEKLLLLNLSRNSLTG--IIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTG--PIP 598 (902)
Q Consensus 523 g~ip~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g--~ip 598 (902)
.+|. .+++|+.|+|++|++++ .+|.+++. |+.|.+.|.+|.. +++|++|++++|+++| .||
T Consensus 351 -~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 351 -EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp -CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------------
T ss_pred -cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccch
Confidence 5666 46788888888888887 56665542 3457788888864 4789999999999998 888
Q ss_pred CCCC
Q 043136 599 ASGT 602 (902)
Q Consensus 599 ~~~~ 602 (902)
.+.+
T Consensus 416 ~sl~ 419 (454)
T 1jl5_A 416 ESVE 419 (454)
T ss_dssp ----
T ss_pred hhHh
Confidence 7643
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5e-44 Score=412.52 Aligned_cols=364 Identities=18% Similarity=0.183 Sum_probs=285.8
Q ss_pred CCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCC-CcccccccccceeccccccccCCCchhhhcccCCcEEe
Q 043136 102 TSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTF-PPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLN 180 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 180 (902)
++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67888888888888777778888888888888888877555 45578888888888888888877788888888888888
Q ss_pred ccCccCcCCCCcc--cCCCCCCCEEEccCCCccCCCCcc-ccCCCCCcEEEeeCcccCCCCChhccCC--CCCCEEEccC
Q 043136 181 LGGSYFDGEIPSD--YRNLSSLRFLDLAGNSLTGSLPPQ-LGLLTQLERIEIGYNNLQGEVPVEFASL--VNLKYMDISA 255 (902)
Q Consensus 181 L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~ 255 (902)
|++|++++.+|.. |.++++|++|+|++|++++..|.. +..+++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 8888887755544 778888888888888888776765 7788888888888888888777777665 6788888888
Q ss_pred ccCcccCCcc--------ccCCCCccEEecCCCccceecCCCCCCc---CcCcEEecccCCCccccCccccccCCCCEEE
Q 043136 256 CNLSGTLPSE--------ISNLTKLEMLLLFKNHFTGEIPVSYGNL---QALQVLDLSDNQLSGPIPASLASLKGLTRLS 324 (902)
Q Consensus 256 N~l~~~~p~~--------~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 324 (902)
|.+.+..+.. +..+++|++|++++|++++..|..+... ++|+.|++++|.+.+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------------- 255 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS-------------- 255 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------
Confidence 8887654433 3356788888888888887777666543 78888888888765431
Q ss_pred ccCccccccCChhhhhc--cccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcC
Q 043136 325 LMNNVLFGEIPQDIELL--ADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNF 402 (902)
Q Consensus 325 L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l 402 (902)
+..+.+.+..+..+..+ ++|+.|++++|++++..|..+..+++|+.|++++|++++..|..+..+++|++|++++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 256 FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 11222222233333333 5778888888888877788888888888888888888887788888888888888888888
Q ss_pred cccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcC
Q 043136 403 TYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLP 479 (902)
Q Consensus 403 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 479 (902)
++..|..+.++++|++|+|++|++++..|.+|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 87888888999999999999999998889999999999999999999998777788999999999999999998877
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.6e-43 Score=408.30 Aligned_cols=385 Identities=17% Similarity=0.207 Sum_probs=241.0
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCC-ChhccCCCCCCEEEccC
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEV-PVEFASLVNLKYMDISA 255 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~ 255 (902)
+.++.+++.++ .+|. + .++|++|+|++|++++..|..|+.+++|++|++++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34555555555 3443 2 145666666666666555566666666666666666655333 34455566666666666
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCC--CCCcCcCcEEecccCCCccccCcc-ccccCCCCEEEccCccccc
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVS--YGNLQALQVLDLSDNQLSGPIPAS-LASLKGLTRLSLMNNVLFG 332 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~ 332 (902)
|++++..|..|.++++|++|+|++|++++..|.. +..+++|++|+|++|++++..|.. +..+++|++|++++|.+.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 6665555555555666666666666555433322 555555555555555555544443 4555555555555555555
Q ss_pred cCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCC--------ccCCCCccEEeccCCcCcc
Q 043136 333 EIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPT--------ICDGDRLFKLILFSNNFTY 404 (902)
Q Consensus 333 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~--------~~~~~~L~~L~l~~N~l~~ 404 (902)
..|..+..+. ..+|+.|++++|.+.+..+.. +..+++|+.|++++|++++
T Consensus 169 ~~~~~l~~l~----------------------~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~ 226 (455)
T 3v47_A 169 ICEEDLLNFQ----------------------GKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226 (455)
T ss_dssp CCTTTSGGGT----------------------TCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH
T ss_pred cChhhhhccc----------------------cccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc
Confidence 5554444331 034555555555554433322 2234456666666666665
Q ss_pred ccccccccc---CCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCccc--CcCceecccccccCCCcC
Q 043136 405 SIPENLVNC---SSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNA--QKLEYLNISENSFQTSLP 479 (902)
Q Consensus 405 ~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p 479 (902)
..|..+... ++|+.|++++|.+.+... ..+.+.+..+..+..+ ++|+.|++++|++.+.+|
T Consensus 227 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp HHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred cchhhhhccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccch
Confidence 565555443 567777777766553211 1122222222233322 456666666666666666
Q ss_pred hhhhcccccceeccCCCccCCCccccc-ccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCc
Q 043136 480 SNIWSAPNLKILSASSSKLTGKIPDFI-GCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPS 558 (902)
Q Consensus 480 ~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 558 (902)
..+..+++|+.|++++|++++..|..+ ++++|++|+|++|.+++..|..++.+++|+.|+|++|++++.+|..++++++
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccc
Confidence 666666666666666666666555443 3677777777777787777888899999999999999999999999999999
Q ss_pred ccEEEccCCcccccCCCCCcCCccceeecccCCcccccCCCCC
Q 043136 559 ITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPASG 601 (902)
Q Consensus 559 L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~ 601 (902)
|++|||++|++++..+..|..+++|++|++++|++++.+|...
T Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 373 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred ccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999998777788999999999999999999999654
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2e-42 Score=397.07 Aligned_cols=235 Identities=23% Similarity=0.202 Sum_probs=158.4
Q ss_pred cccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchh
Q 043136 90 LSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLE 169 (902)
Q Consensus 90 l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 169 (902)
..+..+..++++++|++|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++|++++. |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 3445556778888888888888888864 4 678888888888888888774 3 77777777777777777764 3
Q ss_pred hhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCC
Q 043136 170 FVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLK 249 (902)
Q Consensus 170 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 249 (902)
++++++|++|+|++|++++. | ++++++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..+++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 67777777777777777753 3 67777777777777777753 2 666777777777777544444 366667777
Q ss_pred EEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcc
Q 043136 250 YMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNV 329 (902)
Q Consensus 250 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 329 (902)
+|++++|++++ +| +..+++|++|++++|++++. .++.+++|++|++++|++++ +| +..+++|++|++++|+
T Consensus 174 ~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 174 TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred EEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 77777777765 33 56666677777777766653 36666666666666666665 34 5566666666666666
Q ss_pred ccccCChhhhhccccceEEecCc
Q 043136 330 LFGEIPQDIELLADLDTLLLWNN 352 (902)
Q Consensus 330 l~~~~p~~~~~l~~L~~L~L~~N 352 (902)
+++.. ++.+++|+.|++++|
T Consensus 245 l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 245 LTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp CSCCC---CTTCTTCCEEECTTC
T ss_pred CCCcC---HHHCCCCCEEeccCC
Confidence 65532 233445555555444
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-42 Score=396.86 Aligned_cols=361 Identities=21% Similarity=0.190 Sum_probs=222.8
Q ss_pred CCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccC
Q 043136 165 PLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFAS 244 (902)
Q Consensus 165 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 244 (902)
..+..++++++|++|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++|+|++. | ++.
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 3333444444444444444444432 2 344444555555555554432 2 44444555555555554432 2 444
Q ss_pred CCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEE
Q 043136 245 LVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLS 324 (902)
Q Consensus 245 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 324 (902)
+++|++|++++|++++ +| +.++++|++|++++|++++. .++.+++|++|++++|+..+.+ .+..+++|++|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 5555555555555543 22 44455555555555555442 1444555555555555333333 244455555555
Q ss_pred ccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcc
Q 043136 325 LMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTY 404 (902)
Q Consensus 325 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~ 404 (902)
+++|++++ +| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 55555544 22 44455555555555555543 24555666666666666665 33 5555666666666666665
Q ss_pred cccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhc
Q 043136 405 SIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWS 484 (902)
Q Consensus 405 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 484 (902)
.. +..+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|. .
T Consensus 248 ~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~ 305 (457)
T 3bz5_A 248 LD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---Q 305 (457)
T ss_dssp CC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---T
T ss_pred cC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---C
Confidence 42 3455677777777653 4567788888777776 46778888888888888777774 4
Q ss_pred ccccceeccCCCccCCCcccccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEc
Q 043136 485 APNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDL 564 (902)
Q Consensus 485 l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 564 (902)
.++|+.|++++| ++|+.|+|++|+|++ +| ++.+++|+.|+|++|+|+| ++.|+.|++
T Consensus 306 ~~~L~~L~l~~~------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l 362 (457)
T 3bz5_A 306 AAGITELDLSQN------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPA 362 (457)
T ss_dssp TCCCSCCCCTTC------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSG
T ss_pred CCcceEechhhc------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccc
Confidence 466777777765 578899999999998 43 8999999999999999997 357788899
Q ss_pred cCCcccccCCCCCcCCccceeecccCCcccccCCCC
Q 043136 565 SHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPAS 600 (902)
Q Consensus 565 s~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~ 600 (902)
++|.++|. .++..|+.+++++|+|+|.||..
T Consensus 363 ~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 363 LNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp GGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99999987 46778999999999999999975
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-39 Score=376.66 Aligned_cols=344 Identities=25% Similarity=0.369 Sum_probs=157.4
Q ss_pred cCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEc
Q 043136 174 NSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDI 253 (902)
Q Consensus 174 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 253 (902)
++|+.|+++++.+.. +|. +..+++|++|+|++|.+++. |. +..+++|++|++++|++++..+ +..+++|++|++
T Consensus 46 ~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 344444444444432 221 34444444444444444432 22 4444444444444444443322 444444444444
Q ss_pred cCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccccc
Q 043136 254 SACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGE 333 (902)
Q Consensus 254 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 333 (902)
++|.+++..+ +.++++|++|++++|++++. + .++.+++|++|+++ |.+.+..+ +..+++|++|++++|.+.+.
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCC
Confidence 4444443221 44444444444444444432 1 24444455555553 23332211 44455555555555554332
Q ss_pred CChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccccc
Q 043136 334 IPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNC 413 (902)
Q Consensus 334 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l 413 (902)
..+..+++|++|++++|++++..| ++.+++|+.|++++|++++. +.+..+++|+.|++++|++.+..| +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 124444555555555555544433 34445555555555555431 123333333333333333333222 4444
Q ss_pred CCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceecc
Q 043136 414 SSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSA 493 (902)
Q Consensus 414 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 493 (902)
++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| +..++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~------- 331 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLT------- 331 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCT-------
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCc-------
Confidence 455555555555543222 4445555555555555544322 4444445555555554444333 33444
Q ss_pred CCCccCCCcccccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccc
Q 043136 494 SSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTG 571 (902)
Q Consensus 494 s~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 571 (902)
+|+.|++++|.+++. ..++.+++|+.|+|++|++++.+| +..+++|+.|++++|.+++
T Consensus 332 ----------------~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 332 ----------------KLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ----------------TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ----------------cCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 444444444444432 245555555666666666655554 5555666666666666554
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-39 Score=376.56 Aligned_cols=342 Identities=27% Similarity=0.383 Sum_probs=187.3
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccc
Q 043136 79 QITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAY 158 (902)
Q Consensus 79 ~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 158 (902)
+++.|++++++++. +| .+..+++|++|+|++|.+++..+ +..+++|++|++++|.+++..+ ++++++|++|+++
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 56666666666653 33 36666667777777666665433 6666666666666666665443 6666666666666
Q ss_pred cccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCC
Q 043136 159 SNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEV 238 (902)
Q Consensus 159 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 238 (902)
+|.+++..+ +..+++|++|++++|.+++. + .+.++++|++|+++ |.+.+.. .+..+++|++|++++|++++.
T Consensus 121 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 121 NNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI- 192 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-
Confidence 666665433 66666666666666666542 2 35666666666664 3344221 255666666666666666543
Q ss_pred ChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccC
Q 043136 239 PVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLK 318 (902)
Q Consensus 239 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 318 (902)
..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..++
T Consensus 193 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~ 265 (466)
T 1o6v_A 193 -SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLT 265 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred -hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCC
Confidence 235556666666666666654433 45556666666666665532 235555566666666666554433 55555
Q ss_pred CCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEecc
Q 043136 319 GLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILF 398 (902)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~ 398 (902)
+|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|+++
T Consensus 266 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 266 KLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred CCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 56666666665554332 4555555555555555554433 4455555555555555554333 3344444444444
Q ss_pred CCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccC
Q 043136 399 SNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLS 451 (902)
Q Consensus 399 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 451 (902)
+|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 340 ~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 340 NNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 4444432 234444444444444444444333 444444444444444444
No 34
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=372.35 Aligned_cols=346 Identities=19% Similarity=0.167 Sum_probs=235.2
Q ss_pred CEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCc
Q 043136 249 KYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNN 328 (902)
Q Consensus 249 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 328 (902)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777777777 4555443 46777888888777777777777777777777777777777777777777777777777
Q ss_pred cccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccc
Q 043136 329 VLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPE 408 (902)
Q Consensus 329 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~ 408 (902)
++.+..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..|.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------------ 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR------------------------ 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT------------------------
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh------------------------
Confidence 77655555566666677777776666666666666666666666666666554444
Q ss_pred cccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhccccc
Q 043136 409 NLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNL 488 (902)
Q Consensus 409 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 488 (902)
.|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++.+..+..|..+++|++|++++|.+.+.+|..+....+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 44455555555555555554444455555556666666665555555555556666666666655555555555555566
Q ss_pred ceeccCCCccCCCcccc-cccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCC
Q 043136 489 KILSASSSKLTGKIPDF-IGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHN 567 (902)
Q Consensus 489 ~~L~ls~N~l~~~~p~~-~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 567 (902)
+.|++++|++++..+.. ..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|..|.++++|+.|||++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66666666665433222 23666777777777777677777888889999999999999988999999999999999999
Q ss_pred cccccCCCCCcCCccceeecccCCcccccCCCCCCcCcCCCCCcccCCcccCCCC
Q 043136 568 FLTGTIPSNFENCSTLESFNVSYNLLTGPIPASGTIFPNLHPSSFIGNEGLCGRV 622 (902)
Q Consensus 568 ~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~gn~~lcg~~ 622 (902)
+|++..+..|..+++|+.|+|++|++.+..+.... ........+.++...|..|
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~-~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWV-FRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHH-HTTTTSSCCTTCCCBEEES
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhH-HhhhhccccCccCceeCCc
Confidence 99977777788899999999999998765432111 1112335567777788765
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=366.44 Aligned_cols=321 Identities=20% Similarity=0.191 Sum_probs=235.5
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+.++.+++.++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 34555555555 3444432 46667777777776666666677777777777777777666667777777777777777
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCCh
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQ 336 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (902)
++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77755555666777777777777777766667777777777777777777776677777777777777777777766556
Q ss_pred hhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCC
Q 043136 337 DIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSL 416 (902)
Q Consensus 337 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L 416 (902)
.+..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|+++...+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 67777777777777777777777777788888888888887777777777666677777777777775555667778888
Q ss_pred cEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCC
Q 043136 417 SRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSS 496 (902)
Q Consensus 417 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 496 (902)
+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 88888888888777777888888888888888888777888888888888888888887766667777778888888887
Q ss_pred ccCC
Q 043136 497 KLTG 500 (902)
Q Consensus 497 ~l~~ 500 (902)
+++.
T Consensus 331 ~l~c 334 (477)
T 2id5_A 331 PLAC 334 (477)
T ss_dssp CEEC
T ss_pred CccC
Confidence 7764
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-37 Score=350.89 Aligned_cols=311 Identities=16% Similarity=0.116 Sum_probs=193.9
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
..++++++|++++|.++...+..|..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|+++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 45688999999999998776667889999999999999998877778888888888888888888877777888888888
Q ss_pred EeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccC
Q 043136 179 LNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNL 258 (902)
Q Consensus 179 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 258 (902)
|+|++|+++...+..|.++++|++|+|++|++++..|..|..+++|++|++++|++++. .+..+++|++|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 88888888755445567778888888888887776666777777777777777777754 245566677777777766
Q ss_pred cccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhh
Q 043136 259 SGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDI 338 (902)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 338 (902)
++. ...++|++|++++|++... |.. ..++|+.|++++|++++. ..+..+++|++|++++|.+.+
T Consensus 199 ~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~------ 262 (390)
T 3o6n_A 199 STL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK------ 262 (390)
T ss_dssp SEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCE------
T ss_pred ccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCC------
Confidence 632 2334566666666666543 221 134555566666655532 344445555555555555544
Q ss_pred hhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcE
Q 043136 339 ELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSR 418 (902)
Q Consensus 339 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~ 418 (902)
..|..|..+++|+.|++++|++++ +|..+..+++|+.|++++|++. .+|..+..+++|+.
T Consensus 263 ------------------~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 263 ------------------IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp ------------------EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ------------------cChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 444445555555555555555542 1222222233333333333333 23333444455555
Q ss_pred EEccCCccCCCCCcccCCCCCCcEEEccCcccC
Q 043136 419 LRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLS 451 (902)
Q Consensus 419 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 451 (902)
|++++|+|++. | +..+++|+.|++++|.++
T Consensus 323 L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 323 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEE
T ss_pred EECCCCcccee-C--chhhccCCEEEcCCCCcc
Confidence 55555555422 2 334444444444444444
No 37
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.3e-37 Score=364.24 Aligned_cols=311 Identities=15% Similarity=0.120 Sum_probs=198.6
Q ss_pred CCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEE
Q 043136 100 YLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQL 179 (902)
Q Consensus 100 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 179 (902)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46788999999999888777778889999999999998888777788888888888888888887777777777777777
Q ss_pred eccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCc
Q 043136 180 NLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLS 259 (902)
Q Consensus 180 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 259 (902)
+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|++|++++|.+++.. +..+++|++|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 77777777555555677777777777777777666666777777777777777776542 344566666666666665
Q ss_pred ccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhh
Q 043136 260 GTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIE 339 (902)
Q Consensus 260 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 339 (902)
+ +...++|++|++++|.++...+.. .++|+.|+|++|.+++ +..+.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--------------------------~~~l~ 251 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--------------------------TAWLL 251 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--------------------------CGGGG
T ss_pred c-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--------------------------Chhhc
Confidence 3 223345566666666555332221 1345555555555543 23444
Q ss_pred hccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEE
Q 043136 340 LLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRL 419 (902)
Q Consensus 340 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 419 (902)
.+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|.. +..+++|+.|
T Consensus 252 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~------------------------~~~l~~L~~L 306 (597)
T 3oja_B 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLY------------------------GQPIPTLKVL 306 (597)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECS------------------------SSCCTTCCEE
T ss_pred cCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcc------------------------cccCCCCcEE
Confidence 55555555555555555555555556666666666665553 1222 2334455555
Q ss_pred EccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCC
Q 043136 420 RIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQT 476 (902)
Q Consensus 420 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 476 (902)
+|++|.++ .+|..++.+++|++|+|++|++++. | +..+++|+.|+|++|.+.+
T Consensus 307 ~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp ECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred ECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 55555555 3455555555566666666655533 2 4455666666666666653
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.7e-37 Score=363.58 Aligned_cols=335 Identities=18% Similarity=0.177 Sum_probs=200.0
Q ss_pred CCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEe
Q 043136 197 LSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLL 276 (902)
Q Consensus 197 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 276 (902)
+++++.|++++|.++...+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788899999888865555677888888888888888877777888888888888888888877777778888888888
Q ss_pred cCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceecc
Q 043136 277 LFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTG 356 (902)
Q Consensus 277 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 356 (902)
|++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 8888888655555677888888888888887777777777777777777777776532 3344555555555554442
Q ss_pred ccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCC
Q 043136 357 VLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGL 436 (902)
Q Consensus 357 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 436 (902)
. .... +|+.|++++|.++.. |..+
T Consensus 207 l-----~~~~------------------------------------------------~L~~L~ls~n~l~~~-~~~~-- 230 (597)
T 3oja_B 207 L-----AIPI------------------------------------------------AVEELDASHNSINVV-RGPV-- 230 (597)
T ss_dssp E-----ECCT------------------------------------------------TCSEEECCSSCCCEE-ECSC--
T ss_pred c-----cCCc------------------------------------------------hhheeeccCCccccc-cccc--
Confidence 1 1112 233344444433321 1111
Q ss_pred CCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCcccccccccccEEec
Q 043136 437 LPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGCKSIYKIEL 516 (902)
Q Consensus 437 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~L 516 (902)
.++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++
T Consensus 231 ~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------------- 292 (597)
T 3oja_B 231 NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA---------------- 292 (597)
T ss_dssp CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE----------------
T ss_pred CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC----------------
Confidence 1344444444444443 2334444555555555555544445555555555555544444443
Q ss_pred cCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCccccc
Q 043136 517 HNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGP 596 (902)
Q Consensus 517 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ 596 (902)
+|..++.+++|+.|+|++|.++ .+|..++.+++|+.|+|++|.+++. | +..+++|+.|++++|++++.
T Consensus 293 --------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 293 --------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp --------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred --------CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 1222233344444444444444 2333444455555555555555432 2 44455566666666666554
Q ss_pred CCCCCCcCcCCCCCcccCCcccCCCC
Q 043136 597 IPASGTIFPNLHPSSFIGNEGLCGRV 622 (902)
Q Consensus 597 ip~~~~~~~~~~~~~~~gn~~lcg~~ 622 (902)
.+. .+...+....+.+++..|+.+
T Consensus 361 ~~~--~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 361 SLR--ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp HHH--HHTTTCCTTTBCCCCCCCCTT
T ss_pred hHH--HHHHHHhhhccccccccCCcc
Confidence 321 122223556678888889864
No 39
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-36 Score=343.02 Aligned_cols=157 Identities=18% Similarity=0.202 Sum_probs=117.8
Q ss_pred CCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEE
Q 043136 196 NLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEML 275 (902)
Q Consensus 196 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 275 (902)
.++++++|++++|.++...+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35788899999988885444457788888888888888887777788888888888888888887777778888888888
Q ss_pred ecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceec
Q 043136 276 LLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLT 355 (902)
Q Consensus 276 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 355 (902)
+|++|+++...+..|+++++|++|+|++|++++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 8888888854444567788888888888888777777777777888888877777643 1344455555555555544
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.7e-37 Score=334.67 Aligned_cols=259 Identities=27% Similarity=0.427 Sum_probs=206.9
Q ss_pred CceeEEEecCCcccC--CCCCCccCCCCccEEeccC-CcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcE
Q 043136 366 GKLLTVDVSSNSLTG--PIPPTICDGDRLFKLILFS-NNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTF 442 (902)
Q Consensus 366 ~~L~~L~Ls~N~l~~--~~p~~~~~~~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 442 (902)
.+++.|++++|++++ .+|..+..+++|++|++++ |++.+.+|..|.++++|++|+|++|++++.+|..|+.+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666666 5666666666666666663 6666667777777777777777777777777777777777777
Q ss_pred EEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhccc-ccceeccCCCccCCCcccccccccccEEeccCccc
Q 043136 443 MDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAP-NLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLL 521 (902)
Q Consensus 443 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l 521 (902)
|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++.+|..++...|+.|+|++|.+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l 209 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcc
Confidence 77777777777777777777777777777777777777777776 77788888887777777666533488888888888
Q ss_pred cccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCCCCC
Q 043136 522 NGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIPASG 601 (902)
Q Consensus 522 ~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip~~~ 601 (902)
++.+|..++.+++|+.|+|++|++++.+|. +..+++|++|||++|+++|.+|..|.++++|++|+|++|+++|.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 888999999999999999999999988776 8889999999999999999999999999999999999999999999985
Q ss_pred CcCcCCCCCcccCCcccCCCCcCCCC
Q 043136 602 TIFPNLHPSSFIGNEGLCGRVLTKPC 627 (902)
Q Consensus 602 ~~~~~~~~~~~~gn~~lcg~~~~~~c 627 (902)
.+. .+....+.||+++||.|+. +|
T Consensus 289 ~l~-~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 289 NLQ-RFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp TGG-GSCGGGTCSSSEEESTTSS-CC
T ss_pred ccc-ccChHHhcCCCCccCCCCC-CC
Confidence 544 4588889999999999854 57
No 41
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.2e-36 Score=334.07 Aligned_cols=284 Identities=19% Similarity=0.263 Sum_probs=206.3
Q ss_pred cCCChhhHHHHHHHHHhCC-CCCCCCcCCCCCCCCCCCCCCCCCCCCCccccEEecC--------CCCCEEEEEcCCCCc
Q 043136 20 ANTLPLPLVSLLSIKASLK-DPFNNSFHDWDATPAFSNPSSEQEPVWCSWSGIKCNP--------KSSQITSLDLSRRSL 90 (902)
Q Consensus 20 ~~~~~~~~~aLl~~k~~~~-~~~~~~l~~W~~~~~~~~~~~~~~~~~C~w~Gv~c~~--------~~~~v~~L~L~~~~l 90 (902)
..+..+|++||++||+++. ++.+ .+.+|..... ..+++|.|.|+.|.. ...+|+.|+|++|++
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~-~~~~w~~~~~-------~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l 93 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNR-WHSAWRQANS-------NNPQIETRTGRALKATADLLEDATQPGRVALELRSVPL 93 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTT-HHHHHHHHTT-------TCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cccCchHHHHHHHHHHhccCCchh-hhhhhccccc-------ccccccccCCcchhhhHHHHhcccccceeEEEccCCCc
Confidence 3467889999999999985 4544 6788952210 023489999999952 234777777777777
Q ss_pred ccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhh
Q 043136 91 SGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEF 170 (902)
Q Consensus 91 ~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 170 (902)
+ .+|+.++.+++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|++++|++.+.+|..+
T Consensus 94 ~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~ 170 (328)
T 4fcg_A 94 P-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPL 170 (328)
T ss_dssp S-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCS
T ss_pred h-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhH
Confidence 7 66777777777777777777777 66667777777777777777776 556666666666666666666666666544
Q ss_pred hcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCE
Q 043136 171 VQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKY 250 (902)
Q Consensus 171 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 250 (902)
... .++..|.++++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..+..+++|++
T Consensus 171 ~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 171 AST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred hhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 331 11123445777888888888777 677777778888888888888874 5556777888888
Q ss_pred EEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccc
Q 043136 251 MDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVL 330 (902)
Q Consensus 251 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 330 (902)
|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.+++..|.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 88888888878888888888888888888888878888888888888888888888888888888888888888877665
Q ss_pred c
Q 043136 331 F 331 (902)
Q Consensus 331 ~ 331 (902)
.
T Consensus 314 ~ 314 (328)
T 4fcg_A 314 A 314 (328)
T ss_dssp C
T ss_pred H
Confidence 4
No 42
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-36 Score=325.88 Aligned_cols=174 Identities=28% Similarity=0.351 Sum_probs=151.0
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|.+.+.||+|+||+||+|++ .+++.||||++.+.........+.+.+|++++++++|||||++++++++++..|+||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 56678999999999999976 56899999999654333333456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
|+||+|.+++...+ .+++.....++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+...
T Consensus 114 ~~gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 114 AKNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred CCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 99999999998654 3778888899999999999999776 999999999999999999999999999987533
Q ss_pred ---CCceeeccccCccccCccccccc
Q 043136 871 ---ESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 871 ---~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
....+.+||+.|||||++.+..+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y 211 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSA 211 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCB
T ss_pred CCcccccCcccCcccCCHHHHcCCCC
Confidence 23456899999999999987544
No 43
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2e-34 Score=319.75 Aligned_cols=307 Identities=26% Similarity=0.362 Sum_probs=136.6
Q ss_pred hhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCC
Q 043136 121 AILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSL 200 (902)
Q Consensus 121 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 200 (902)
.+..+++|++|++++|.+... | .+..+++|++|++++|++++..+ +..+++|++|+|++|.++. +| .+.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 355677777777777777542 2 25556666666666665554332 5555555555555555553 22 35555555
Q ss_pred CEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCC
Q 043136 201 RFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKN 280 (902)
Q Consensus 201 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 280 (902)
++|+|++|++++ ++. +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 555555555553 222 4445555555555553332222 24444444444444444443222 344444444444444
Q ss_pred ccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCc
Q 043136 281 HFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQ 360 (902)
Q Consensus 281 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 360 (902)
.+.+.. + +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+
T Consensus 188 ~l~~~~------------------------~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 188 QIEDIS------------------------P--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp CCCCCG------------------------G--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred cccccc------------------------c--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 443221 1 3334444444444444432222 3334444444444444443222
Q ss_pred cccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCC
Q 043136 361 KLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNL 440 (902)
Q Consensus 361 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 440 (902)
+..+++|+.|++++|++++. +.+..+++|++|++++|++++. +.+..+++|+.|++++|++++..|..|+.+++|
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 34444444444444444421 1222222333333333333221 123334444444444444444444444444444
Q ss_pred cEEEccCcccCCCCCCcCcccCcCceeccccccc
Q 043136 441 TFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSF 474 (902)
Q Consensus 441 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 474 (902)
++|+|++|++++..| +..+++|++|++++|.|
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 444444444443333 33444444444444443
No 44
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.2e-34 Score=319.44 Aligned_cols=308 Identities=22% Similarity=0.312 Sum_probs=247.1
Q ss_pred cccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCC
Q 043136 97 EIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSL 176 (902)
Q Consensus 97 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 176 (902)
.+..+++|++|++++|.+... + .+..+++|++|++++|++++..+ +..+++|++|++++|.++.. ..|..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred cchhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 456889999999999999864 3 48999999999999999987544 99999999999999999874 369999999
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
++|+|++|.+++..+ +..+++|++|++++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 999999999986543 899999999999999766444 459999999999999999986654 889999999999999
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCCh
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQ 336 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (902)
.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++. +
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 9986543 8899999999999999986544 7888999999999999986544 77888888888888887653 3
Q ss_pred hhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCC
Q 043136 337 DIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSL 416 (902)
Q Consensus 337 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L 416 (902)
.+..+++|++|++++|++++. +.+..+++|+.|++++|++++..|..+..+++|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--------------------------SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--------------------------GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred hHhcCCCcCEEEccCCccCCC--------------------------hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 455556666666666655542 234445555666666666666677777888888
Q ss_pred cEEEccCCccCCCCCcccCCCCCCcEEEccCcccC
Q 043136 417 SRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLS 451 (902)
Q Consensus 417 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 451 (902)
++|++++|++++..| +..+++|++|++++|.|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888886655 778888888888888875
No 45
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.8e-36 Score=326.57 Aligned_cols=177 Identities=21% Similarity=0.285 Sum_probs=145.4
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||+||+|++ .+++.||||++.+... .....+.+.+|++++++++|||||++++++++++..|+|||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 356678999999999999976 4689999999965432 33456789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
||+||+|.+++...+. ..+++.....|+.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999975432 24677888899999999999999776 99999999999999999999999999987654
Q ss_pred CC-CceeeccccCccccCcccccccC
Q 043136 870 DE-SMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 870 ~~-~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
.. ...+.+||+.|||||++.+..+.
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~ 203 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYN 203 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCC
T ss_pred CcccccccCCCccccCHHHHCCCCCC
Confidence 32 23457899999999999876443
No 46
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.8e-36 Score=314.84 Aligned_cols=174 Identities=26% Similarity=0.376 Sum_probs=135.3
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||+||+|+. .+++.||||++.+.........+.+.+|++++++++|||||++++++++++..|+|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 466778999999999999976 4689999999965544444445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+ +|+|.+++..++ .+++.....++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 94 y~-~g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 94 YA-GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp CC-CEEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred CC-CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 99 789999987643 3778888999999999999999776 99999999999999999999999999998776
Q ss_pred CCCceeeccccCccccCccccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.....+.+||+.|||||++.+...
T Consensus 165 ~~~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 165 GNFLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp ----------CTTSCHHHHSSSSC
T ss_pred CCccCCeeECcccCChhhhcCCCC
Confidence 666677899999999999987643
No 47
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-35 Score=313.19 Aligned_cols=173 Identities=27% Similarity=0.405 Sum_probs=145.7
Q ss_pred cCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec----CCeeEEE
Q 043136 713 MSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN----RECTMLL 787 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~----~~~~~lv 787 (902)
.+++.||+|+||+||+|.+ .+++.||+|++..... .....+.+.+|++++++++|||||+++++|++ ++..|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4567899999999999976 4688999999865432 33456779999999999999999999999865 3568999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC-CCCEEEeeccccee
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG-EMEARVADFGVAKL 866 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~ 866 (902)
||||+||+|.++++... .+++..+..|+.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+.
T Consensus 108 mEy~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EeCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 99999999999997653 4778888899999999999999652 45999999999999974 79999999999985
Q ss_pred ccCCCCceeeccccCccccCccccccc
Q 043136 867 IQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 867 ~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
. ......+.+||+.|||||++.+.+.
T Consensus 182 ~-~~~~~~~~~GTp~YmAPE~~~~~y~ 207 (290)
T 3fpq_A 182 K-RASFAKAVIGTPEFMAPEMYEEKYD 207 (290)
T ss_dssp C-CTTSBEESCSSCCCCCGGGGGTCCC
T ss_pred C-CCCccCCcccCccccCHHHcCCCCC
Confidence 4 3344567899999999999987544
No 48
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-35 Score=323.26 Aligned_cols=170 Identities=24% Similarity=0.380 Sum_probs=147.4
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||+||+|++. +|+.||||++...... ..+.+.+|++++++++|||||+++++|.+++..|+||||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 445578999999999999764 6999999999543322 234578999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
|+||+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 153 ~~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 153 LEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CTTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999998653 3678888999999999999999776 999999999999999999999999999987543
Q ss_pred -CCceeeccccCccccCccccccc
Q 043136 871 -ESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 871 -~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
....+.+||+.|||||++.+..+
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y 247 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPY 247 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCB
T ss_pred CCcccccccCcCcCCHHHHCCCCC
Confidence 34567899999999999976543
No 49
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.4e-35 Score=316.79 Aligned_cols=177 Identities=25% Similarity=0.436 Sum_probs=146.8
Q ss_pred ccCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
+.+.+.||+|+||+||+|++. +++.||||++... .....+++.+|++++++++|||||+++++|.+.+..|
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 346689999999999999763 4778999998543 2345677999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhc--------cCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEE
Q 043136 786 LLYEYMPNGNLDDLLHAKN--------KGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEAR 857 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~k 857 (902)
+|||||++|+|.++++..+ ......++|..+..|+.|||+||+|||+++ ||||||||+|||++.++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEE
Confidence 9999999999999997643 123346899999999999999999999766 99999999999999999999
Q ss_pred EeecccceeccCCCCc---eeeccccCccccCcccccccC
Q 043136 858 VADFGVAKLIQSDESM---SVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 858 l~DFGla~~~~~~~~~---~~~~Gt~~y~APE~~~~~~~~ 894 (902)
|+|||+|+........ ...+||+.|||||++.+....
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCC
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCC
Confidence 9999999876443322 235699999999999765443
No 50
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=315.36 Aligned_cols=173 Identities=29% Similarity=0.420 Sum_probs=141.5
Q ss_pred CCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEccCC
Q 043136 714 SDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 714 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
+.+.||+|+||+||+|++.+ .||||++.... ......+.|.+|++++++++|||||++++++.+ +..|+|||||++
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 45789999999999998643 59999985433 234556789999999999999999999998864 568999999999
Q ss_pred CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC---
Q 043136 794 GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD--- 870 (902)
Q Consensus 794 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~--- 870 (902)
|+|.++++... ..+++..+..|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 116 GsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 116 SSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999997543 24789999999999999999999766 999999999999999999999999999876432
Q ss_pred CCceeeccccCccccCcccccccCcee
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCFSVPFC 897 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~~~p~~ 897 (902)
......+||+.|||||++.+....||+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~ 215 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFS 215 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCC
Confidence 233557899999999999776544544
No 51
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.2e-35 Score=325.79 Aligned_cols=172 Identities=24% Similarity=0.372 Sum_probs=148.7
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|++ .+|+.||||++...... ..+.+.+|+++|++++|||||+++++|.+.+.+|+|||
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 355668899999999999976 46899999999644322 23457899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
||+||+|.++++.. .+++..+..|+.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 229 y~~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 229 FLEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp CCTTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999998643 2678888999999999999999776 99999999999999999999999999998754
Q ss_pred C-CCceeeccccCccccCcccccccC
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
. ....+.+||+.|||||++.+..+.
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~ 325 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYG 325 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBC
T ss_pred CCccccccccCcCcCCHHHHCCCCCC
Confidence 3 345678999999999999875443
No 52
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=317.74 Aligned_cols=176 Identities=26% Similarity=0.398 Sum_probs=141.5
Q ss_pred cCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 713 MSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
.+.+.||+|+||+||+|++. +++.||||++... .....++|.+|++++++++|||||+++++|.+.+..|+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34578999999999999764 4788999999543 33456779999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCE
Q 043136 787 LYEYMPNGNLDDLLHAKNKG----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEA 856 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~ 856 (902)
|||||++|+|.++++..... ...+++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 99999999999999764321 1235889999999999999999999766 9999999999999999999
Q ss_pred EEeecccceeccCCCC---ceeeccccCccccCcccccccC
Q 043136 857 RVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 857 kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
||+|||+|+....... ....+||+.|||||++.+....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~ 238 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCC
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCC
Confidence 9999999987643322 2446799999999999876443
No 53
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-34 Score=314.61 Aligned_cols=167 Identities=25% Similarity=0.261 Sum_probs=140.9
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
+...++||+|+||+||+|++ .+|+.||||++..... ..+|++++++++|||||++++++.+.+..|+||||
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 34557899999999999976 4689999999854321 24699999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC-CEEEeecccceeccC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM-EARVADFGVAKLIQS 869 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~~~~~ 869 (902)
|+||+|.++++..+ .+++.....++.||+.||+|||+++ ||||||||+|||++.+| ++||+|||+|+.+..
T Consensus 132 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred cCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 99999999997654 3788889999999999999999665 99999999999999998 699999999998754
Q ss_pred CCC------ceeeccccCccccCcccccccC
Q 043136 870 DES------MSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 870 ~~~------~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
+.. ....+||+.|||||++.+..+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~ 234 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCC
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCC
Confidence 322 2336899999999999876443
No 54
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-35 Score=317.65 Aligned_cols=176 Identities=20% Similarity=0.332 Sum_probs=146.5
Q ss_pred cCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 713 MSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
.+.+.||+|+||+||+|++. +++.||||++..... ....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~--~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE--GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC--C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC--hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 45578999999999999752 467899999864332 2335678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccC-----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC
Q 043136 787 LYEYMPNGNLDDLLHAKNKG-----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME 855 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~ 855 (902)
|||||++|+|.+++..+... ....+++..+..|+.|||+||+|||+++ ||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 99999999999999764321 1235889999999999999999999776 999999999999999999
Q ss_pred EEEeecccceeccCCC---CceeeccccCccccCccccccc
Q 043136 856 ARVADFGVAKLIQSDE---SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 856 ~kl~DFGla~~~~~~~---~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+||+|||+|+...... .....+||+.|||||++.+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~ 224 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF 224 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCC
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCC
Confidence 9999999998764322 2345689999999999976543
No 55
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.4e-33 Score=307.78 Aligned_cols=288 Identities=20% Similarity=0.276 Sum_probs=164.0
Q ss_pred CCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecC
Q 043136 199 SLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLF 278 (902)
Q Consensus 199 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 278 (902)
+++.+++++|.++ .+|..+. ++|++|++++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3444444444444 3343332 344555555555544444445555555555555555554444555555555555555
Q ss_pred CCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccc--ccCChhhhhccccceEEecCceecc
Q 043136 279 KNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLF--GEIPQDIELLADLDTLLLWNNHLTG 356 (902)
Q Consensus 279 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 356 (902)
+|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.+. +..|..+..+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 55554 3333332 45555555555555444444555555555555555553 2444444444 55555555555554
Q ss_pred ccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCC
Q 043136 357 VLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGL 436 (902)
Q Consensus 357 ~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 436 (902)
+|..+. ++|+.|++++|++++..+..+..+++|+.|++++|++++..|..+..+++|++|+|++|+++ .+|.++..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 232222 45666666666666666666666666666666666666666666777777777777777777 66777777
Q ss_pred CCCCcEEEccCcccCCCCCCcCccc------CcCceecccccccC--CCcChhhhcccccceeccCCCc
Q 043136 437 LPNLTFMDMSRNSLSGEIPRDLGNA------QKLEYLNISENSFQ--TSLPSNIWSAPNLKILSASSSK 497 (902)
Q Consensus 437 l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ls~N~ 497 (902)
+++|++|++++|++++..+..|... ..|+.|++++|.+. +..|..+..+++|+.+++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 7777777777777776655555543 45677777777765 4556666667777777766663
No 56
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.7e-34 Score=309.11 Aligned_cols=176 Identities=24% Similarity=0.342 Sum_probs=136.1
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC--------
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE-------- 782 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~-------- 782 (902)
|...+.||+|+||+||+|++ .+++.||||++.... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45568999999999999976 468999999985433 2344567899999999999999999999986543
Q ss_pred ----eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEE
Q 043136 783 ----CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARV 858 (902)
Q Consensus 783 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl 858 (902)
+.|+|||||++|+|.+++..+... ...++.....|+.||++||+|||+++ ||||||||+|||++.++.+||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI--EERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG--GGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEE
Confidence 479999999999999999765322 23455667789999999999999776 999999999999999999999
Q ss_pred eecccceeccCCCC-------------ceeeccccCccccCcccccccC
Q 043136 859 ADFGVAKLIQSDES-------------MSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 859 ~DFGla~~~~~~~~-------------~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
+|||+|+....... ..+.+||+.|||||++.+..+.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~ 208 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCC
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCC
Confidence 99999987754321 2346899999999999876443
No 57
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-33 Score=308.74 Aligned_cols=287 Identities=18% Similarity=0.237 Sum_probs=162.1
Q ss_pred CcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccC
Q 043136 176 LQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISA 255 (902)
Q Consensus 176 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 255 (902)
|+.++++++.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|++++|++++..|..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444443 3333332 3444555555554444444445555555555555555444444455555555555555
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCc--cccCccccccCCCCEEEccCcccccc
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLS--GPIPASLASLKGLTRLSLMNNVLFGE 333 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~ 333 (902)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|.+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 5554 2333222 44555555555555433334455555555555555553 2344444444 55555555555543
Q ss_pred CChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccccc
Q 043136 334 IPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNC 413 (902)
Q Consensus 334 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l 413 (902)
+|..+. ++|++|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 333222 45555666666666555555666666666666666666655556666666666666666666 566777778
Q ss_pred CCCcEEEccCCccCCCCCcccCC------CCCCcEEEccCcccC--CCCCCcCcccCcCceecccccc
Q 043136 414 SSLSRLRIQDNQLNGSIPQGFGL------LPNLTFMDMSRNSLS--GEIPRDLGNAQKLEYLNISENS 473 (902)
Q Consensus 414 ~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 473 (902)
++|+.|++++|+|++..+..|.. .++|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 88888888888888666666654 367888888888887 6677788888889988888874
No 58
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2e-37 Score=357.93 Aligned_cols=255 Identities=19% Similarity=0.202 Sum_probs=141.2
Q ss_pred CEEEEEcCCCCcccccCcc-ccCCCCCCEEEccCCCCcc----cCchhhhccCCCcEEEccCCCCCCCCCccc-cccc--
Q 043136 79 QITSLDLSRRSLSGPIPPE-IRYLTSLTHLNLSANAFDG----PLQPAILELTKLRTIDISHNSFNSTFPPGI-SKLR-- 150 (902)
Q Consensus 79 ~v~~L~L~~~~l~g~~~~~-~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~-- 150 (902)
+++.|||++++++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 5677777777776543332 6667777777777777764 245556667777777777777765433332 2233
Q ss_pred --ccceeccccccccC----CCchhhhcccCCcEEeccCccCcCCCCccc-----CCCCCCCEEEccCCCccCC----CC
Q 043136 151 --FLRIFNAYSNSFTG----PLPLEFVQLNSLQQLNLGGSYFDGEIPSDY-----RNLSSLRFLDLAGNSLTGS----LP 215 (902)
Q Consensus 151 --~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p 215 (902)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+..+ ...++|++|+|++|++++. ++
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666663 346666666666666666666653322222 2244566666666666642 23
Q ss_pred ccccCCCCCcEEEeeCcccCCCCChhcc-----CCCCCCEEEccCccCccc----CCccccCCCCccEEecCCCccceec
Q 043136 216 PQLGLLTQLERIEIGYNNLQGEVPVEFA-----SLVNLKYMDISACNLSGT----LPSEISNLTKLEMLLLFKNHFTGEI 286 (902)
Q Consensus 216 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~ 286 (902)
..+..+++|++|++++|.++...+..+. ..++|++|+|++|.+++. ++..+..+++|++|+|++|++++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 4444556666666666665543333332 244566666666665542 3444555555666666666554321
Q ss_pred -----CCCCCCcCcCcEEecccCCCccc----cCccccccCCCCEEEccCcccccc
Q 043136 287 -----PVSYGNLQALQVLDLSDNQLSGP----IPASLASLKGLTRLSLMNNVLFGE 333 (902)
Q Consensus 287 -----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~ 333 (902)
+..+..+++|++|+|++|++++. ++..+..+++|++|++++|.+.+.
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 11122345555555555555432 344444455555555555555433
No 59
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=9.9e-33 Score=303.83 Aligned_cols=295 Identities=19% Similarity=0.230 Sum_probs=167.9
Q ss_pred CCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEecc
Q 043136 103 SLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLG 182 (902)
Q Consensus 103 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 182 (902)
+++.++++++.++. +|..+. ++|++|+|++|++++..+..|+++ ++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l------------------------~~L~~L~L~ 84 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNL------------------------KNLHTLILI 84 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTC------------------------TTCCEEECC
T ss_pred CCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccC------------------------CCCCEEECC
Confidence 45666666666653 333332 455555555555554444444444 444555555
Q ss_pred CccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcc--
Q 043136 183 GSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSG-- 260 (902)
Q Consensus 183 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-- 260 (902)
+|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 85 NNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 55554444455555555555555555555 3343332 455556666666555555556666666666666666542
Q ss_pred cCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhh
Q 043136 261 TLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIEL 340 (902)
Q Consensus 261 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 340 (902)
..+..+.++++|++|++++|+++. +|..+. ++|++|++++|++++..|..|..+++|++|++++|.+++..+..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 445556666666666666666653 343332 56666666666666655666666666666666666666655556666
Q ss_pred ccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEE
Q 043136 341 LADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLR 420 (902)
Q Consensus 341 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 420 (902)
+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..++... .......|+.|+
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~ 299 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVS 299 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEE
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceE
Confidence 666666666666666 4555566666666666666666654444443221 011235677778
Q ss_pred ccCCccCC--CCCcccCCCCCCcEEEccCcc
Q 043136 421 IQDNQLNG--SIPQGFGLLPNLTFMDMSRNS 449 (902)
Q Consensus 421 Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 449 (902)
+++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 300 l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 300 LFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred eecCcccccccCccccccccceeEEEecccC
Confidence 88887752 556778888888888888875
No 60
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.7e-33 Score=304.25 Aligned_cols=288 Identities=20% Similarity=0.247 Sum_probs=152.0
Q ss_pred CCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEcc
Q 043136 175 SLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDIS 254 (902)
Q Consensus 175 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 254 (902)
+|+.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4555666655555 3444332 355555555555554444455555555555555555555445555555555555555
Q ss_pred CccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccc--c
Q 043136 255 ACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLF--G 332 (902)
Q Consensus 255 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~ 332 (902)
+|+++ .+|..+. ++ |++|++++|++++..+..|..+++|++|++++|.+. +
T Consensus 109 ~n~l~-~l~~~~~--~~------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KT------------------------LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCS-BCCSSCC--TT------------------------CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCC-ccChhhc--cc------------------------ccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 55554 2333222 34 444444444444444444444444444444444442 1
Q ss_pred cCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccc
Q 043136 333 EIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVN 412 (902)
Q Consensus 333 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~ 412 (902)
..+..+..+++|++|++++|+++. +|..+. ++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 334444444555555555555443 222221 45555555555555555555555555555555555555555556666
Q ss_pred cCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCccc------CcCceecccccccCC--CcChhhhc
Q 043136 413 CSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNA------QKLEYLNISENSFQT--SLPSNIWS 484 (902)
Q Consensus 413 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~--~~p~~~~~ 484 (902)
+++|++|+|++|+++ .+|.++..+++|++|+|++|++++..+..|... ..|+.|++++|.+.. ..|..+..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 666777777777776 566666677777777777777766555555432 456666666666542 34455555
Q ss_pred ccccceeccCCC
Q 043136 485 APNLKILSASSS 496 (902)
Q Consensus 485 l~~L~~L~ls~N 496 (902)
+.+++.+++++|
T Consensus 318 ~~~l~~l~L~~N 329 (330)
T 1xku_A 318 VYVRAAVQLGNY 329 (330)
T ss_dssp CCCGGGEEC---
T ss_pred ccceeEEEeccc
Confidence 555555555555
No 61
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.4e-35 Score=314.70 Aligned_cols=174 Identities=27% Similarity=0.287 Sum_probs=141.2
Q ss_pred ccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
|.+.+.||+|+||+||+|+.. +++.||||++.+..... .....+.+|++++++++|||||++++++++++..|+|
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 556789999999999999752 47899999986433211 1223477899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
||||+||+|.+++...+ .+++.....++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+..
T Consensus 105 mEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp ECCCTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEcCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999997654 3778888899999999999999776 999999999999999999999999999875
Q ss_pred cC-CCCceeeccccCccccCcccccccC
Q 043136 868 QS-DESMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 868 ~~-~~~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
.. .....+.+||+.|||||++.+..+.
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~ 204 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHT 204 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCC
T ss_pred cCCCccccccccCcccCCHHHhccCCCC
Confidence 43 3344568999999999999876544
No 62
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=5e-37 Score=354.57 Aligned_cols=374 Identities=18% Similarity=0.182 Sum_probs=225.9
Q ss_pred CCCCEEEccCCCccCCCCcc-ccCCCCCcEEEeeCcccCC----CCChhccCCCCCCEEEccCccCcccCCccc-cCCC-
Q 043136 198 SSLRFLDLAGNSLTGSLPPQ-LGLLTQLERIEIGYNNLQG----EVPVEFASLVNLKYMDISACNLSGTLPSEI-SNLT- 270 (902)
Q Consensus 198 ~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 270 (902)
++|++|+|++|+++...... +..+++|++|++++|+++. .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56788888888887443332 6778888888888888874 345667778888888888888875444333 2344
Q ss_pred ---CccEEecCCCccce----ecCCCCCCcCcCcEEecccCCCccccCccccc-----cCCCCEEEccCccccccC----
Q 043136 271 ---KLEMLLLFKNHFTG----EIPVSYGNLQALQVLDLSDNQLSGPIPASLAS-----LKGLTRLSLMNNVLFGEI---- 334 (902)
Q Consensus 271 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~~---- 334 (902)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+.. .++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888773 45667777888888888888876544443332 456888888888776643
Q ss_pred ChhhhhccccceEEecCceeccccCccccC-----CCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccc
Q 043136 335 PQDIELLADLDTLLLWNNHLTGVLPQKLGS-----NGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPEN 409 (902)
Q Consensus 335 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~ 409 (902)
+..+..+++|++|++++|.+++..+..+.. .++|+.|++++|++++... ..++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--------------------~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC--------------------RDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH--------------------HHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH--------------------HHHHHH
Confidence 444556677777777777776544433322 3456666666666553200 013444
Q ss_pred ccccCCCcEEEccCCccCCCC-----CcccCCCCCCcEEEccCcccCCC----CCCcCcccCcCceecccccccCCCcCh
Q 043136 410 LVNCSSLSRLRIQDNQLNGSI-----PQGFGLLPNLTFMDMSRNSLSGE----IPRDLGNAQKLEYLNISENSFQTSLPS 480 (902)
Q Consensus 410 l~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 480 (902)
+..+++|++|++++|++++.. +..+..+++|++|+|++|++++. ++..+..+++|++|+|++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 555556666666666554321 22233455666666666666543 444555566666666666665443333
Q ss_pred hhhcc-----cccceeccCCCccCCC----cccccc-cccccEEeccCccccccCCccccc-----cccceEEEeeCCcc
Q 043136 481 NIWSA-----PNLKILSASSSKLTGK----IPDFIG-CKSIYKIELHNNLLNGSIPWDIGH-----CEKLLLLNLSRNSL 545 (902)
Q Consensus 481 ~~~~l-----~~L~~L~ls~N~l~~~----~p~~~~-~~~l~~l~Ls~N~l~g~ip~~~~~-----l~~L~~L~Ls~N~l 545 (902)
.+... ++|+.|++++|++++. ++..+. +++|+.|+|++|.+++..+..+.. .++|+.|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33322 4566666666665543 222222 456666666666665544444432 45677777777777
Q ss_pred ee----cCCCCCCCCCcccEEEccCCccccc--------CCCCCcCCccceeecccCC
Q 043136 546 TG----IIPWEISGLPSITDVDLSHNFLTGT--------IPSNFENCSTLESFNVSYN 591 (902)
Q Consensus 546 ~g----~~p~~~~~l~~L~~L~Ls~N~l~g~--------ip~~~~~l~~L~~l~ls~N 591 (902)
++ .+|..+..+++|++|||++|++++. +|.....++.|..++++.|
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 75 5666666777777777777777654 4444444444444444433
No 63
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-33 Score=303.93 Aligned_cols=169 Identities=28% Similarity=0.376 Sum_probs=137.4
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC----eeEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE----CTMLL 787 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~----~~~lv 787 (902)
+..++.||+|+||+||+|++ +|+.||||++..... ......+|+..+.+++|||||++++++.+.+ ..|+|
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 45678999999999999987 689999999854322 1222345677778899999999999997653 57999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEcCCCCCCEEEcCCCCEEEeecc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-----CDPVIVHRDLKPSNILLDGEMEARVADFG 862 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivHrDlKp~NILl~~~~~~kl~DFG 862 (902)
||||++|+|.++++.. .+++..+.+++.|+++||+|||++ +.++||||||||+|||++.++++||+|||
T Consensus 80 ~Ey~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred ecCCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999753 378889999999999999999975 23469999999999999999999999999
Q ss_pred cceeccCCCC-----ceeeccccCccccCccccc
Q 043136 863 VAKLIQSDES-----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 863 la~~~~~~~~-----~~~~~Gt~~y~APE~~~~~ 891 (902)
+|+....... ....+||+.|||||++.+.
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~ 187 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhccc
Confidence 9998754332 2346899999999999764
No 64
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=2.2e-32 Score=304.03 Aligned_cols=283 Identities=20% Similarity=0.216 Sum_probs=208.8
Q ss_pred CCCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 64 VWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 64 ~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
.+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|
T Consensus 28 ~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (353)
T 2z80_A 28 LSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE 93 (353)
T ss_dssp CEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT
T ss_pred CCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH
Confidence 37999988 75 3556666 5676554 589999999999998877799999999999999999998888
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCC-cccCCCCCCCEEEccCC-CccCCCCccccCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIP-SDYRNLSSLRFLDLAGN-SLTGSLPPQLGLL 221 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l 221 (902)
..|+++++|++|++++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++| .+++..|..|+.+
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 94 DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 889999999999999999998777779999999999999999985444 47889999999999998 4776667788889
Q ss_pred CCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCC---CcCcCcE
Q 043136 222 TQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYG---NLQALQV 298 (902)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~ 298 (902)
++|++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|++|++++|++++..+..+. ....++.
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~ 253 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCE
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhc
Confidence 9999999999999888888898899999999999988744444455678888888888888865544332 2344555
Q ss_pred EecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcc
Q 043136 299 LDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSL 378 (902)
Q Consensus 299 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 378 (902)
++|++|.+++. .+. .+|+.+..+++|+.|++++|+++...+..|..+++|+.|++++|.+
T Consensus 254 l~L~~~~l~~~-------------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~ 313 (353)
T 2z80_A 254 FTFRNVKITDE-------------------SLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPW 313 (353)
T ss_dssp EEEESCBCCHH-------------------HHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred cccccccccCc-------------------chh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCc
Confidence 55555555431 000 2344444445555555555555533333345555555555555555
Q ss_pred cC
Q 043136 379 TG 380 (902)
Q Consensus 379 ~~ 380 (902)
++
T Consensus 314 ~~ 315 (353)
T 2z80_A 314 DC 315 (353)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 65
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.98 E-value=4.2e-35 Score=349.66 Aligned_cols=430 Identities=15% Similarity=0.099 Sum_probs=284.9
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCC---cccCchh------------hhccCCCc
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAF---DGPLQPA------------ILELTKLR 129 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l---~~~~~~~------------~~~l~~L~ 129 (902)
|++|.++.+... ..+.+.+ ......+..+..+++|++|+|+++.. .+.+|.. +..+++|+
T Consensus 41 ck~W~~~~~~~~----~~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR----EHVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC----CEEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc----cEEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 558999854322 2233332 23333445667888899999977432 1222222 22788999
Q ss_pred EEEccCCCCCCCCCcccccc--cccceecccccc-ccC-CCchhhhcccCCcEEeccCccCcCC----CCcccCCCCCCC
Q 043136 130 TIDISHNSFNSTFPPGISKL--RFLRIFNAYSNS-FTG-PLPLEFVQLNSLQQLNLGGSYFDGE----IPSDYRNLSSLR 201 (902)
Q Consensus 130 ~L~Ls~N~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~ 201 (902)
+|+|++|.+++..+..+..+ ++|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998887766666664 448999998876 221 1233345788899999998888765 333456778888
Q ss_pred EEEccCCCccC----CCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCc---ccCCccccCCCCccE
Q 043136 202 FLDLAGNSLTG----SLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLS---GTLPSEISNLTKLEM 274 (902)
Q Consensus 202 ~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~ 274 (902)
+|+|++|.+++ .++..+..+++|++|++++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 99998888873 334445678888888888888885 6677888888888888764332 233456677788888
Q ss_pred EecCCCccceecCCCCCCcCcCcEEecccCCCccccC-ccccccCCCCEEEccCccccccCChhhhhccccceEEec---
Q 043136 275 LLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIP-ASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLW--- 350 (902)
Q Consensus 275 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~--- 350 (902)
|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+++
T Consensus 275 L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 888876433 566677778888888888888765443 345778888888888333223333444667788888888
Q ss_pred --------CceeccccC-ccccCCCceeEEEecCCcccCCCCCCccC-CCCccEEecc----CCcCccc-----cccccc
Q 043136 351 --------NNHLTGVLP-QKLGSNGKLLTVDVSSNSLTGPIPPTICD-GDRLFKLILF----SNNFTYS-----IPENLV 411 (902)
Q Consensus 351 --------~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-~~~L~~L~l~----~N~l~~~-----~p~~l~ 411 (902)
.|.+++... .....+++|+.|+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~ 433 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLI 433 (592)
T ss_dssp CSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHH
T ss_pred cccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHH
Confidence 356664322 22345677888888778777665555544 6677777775 5666653 444466
Q ss_pred ccCCCcEEEccCC--ccCCCCCcccC-CCCCCcEEEccCcccCC-CCCCcCcccCcCceecccccccCCC-cChhhhccc
Q 043136 412 NCSSLSRLRIQDN--QLNGSIPQGFG-LLPNLTFMDMSRNSLSG-EIPRDLGNAQKLEYLNISENSFQTS-LPSNIWSAP 486 (902)
Q Consensus 412 ~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~ 486 (902)
++++|+.|+++.+ .+++..+..++ .+++|++|+|++|++++ .++..+..+++|++|+|++|.+++. ++..+..++
T Consensus 434 ~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~ 513 (592)
T 3ogk_B 434 GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLP 513 (592)
T ss_dssp HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCS
T ss_pred hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcC
Confidence 6777888887643 35554444443 36778888888877765 3444556677788888888777533 344455677
Q ss_pred ccceeccCCCccCCC
Q 043136 487 NLKILSASSSKLTGK 501 (902)
Q Consensus 487 ~L~~L~ls~N~l~~~ 501 (902)
+|+.|++++|++++.
T Consensus 514 ~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 514 SLRYLWVQGYRASMT 528 (592)
T ss_dssp SCCEEEEESCBCCTT
T ss_pred ccCeeECcCCcCCHH
Confidence 777777777777654
No 66
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=4.4e-32 Score=295.26 Aligned_cols=284 Identities=24% Similarity=0.342 Sum_probs=220.4
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCC--C
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNST--F 142 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~ 142 (902)
.|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .
T Consensus 6 ~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 6 SCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCc
Confidence 589999988644 233 3454433 6888999999998866556678889999999999988743 3
Q ss_pred CcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCC-cccCCCCCCCEEEccCCCccCCCCccccCC
Q 043136 143 PPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIP-SDYRNLSSLRFLDLAGNSLTGSLPPQLGLL 221 (902)
Q Consensus 143 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 221 (902)
|..+..+++|++|++++|.+++ +|..+..+++|++|+|++|++++..+ ..+.++++|++|++++|.+++..|..+..+
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 5666778888888888888874 56668888888888888888886655 578888888888888888888888888888
Q ss_pred CCCcEEEeeCcccCC-CCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEe
Q 043136 222 TQLERIEIGYNNLQG-EVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLD 300 (902)
Q Consensus 222 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 300 (902)
++|++|++++|.+++ ..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 888888888888876 5778888888888888888888887788888888888888888888877666788888888888
Q ss_pred cccCCCccccCccccccC-CCCEEEccCccccccCCh--hhhhccccceEEecCceeccccCccccC
Q 043136 301 LSDNQLSGPIPASLASLK-GLTRLSLMNNVLFGEIPQ--DIELLADLDTLLLWNNHLTGVLPQKLGS 364 (902)
Q Consensus 301 Ls~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 364 (902)
|++|++++..|..+..++ +|++|+|++|.+.+..+. ....+...+.+....+.+....|..+.+
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 888888888888888874 888888888888765331 1233445555566666676666666544
No 67
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.98 E-value=4.7e-33 Score=305.55 Aligned_cols=180 Identities=28% Similarity=0.363 Sum_probs=147.4
Q ss_pred HHhccCCcEeeecCceEEEEEEeCC------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc-CeeEeEEeEEecC
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMPG------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH-RNIVRLLGCCSNR 781 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-~nIv~l~~~~~~~ 781 (902)
...+.+.+.||+|+||+||+|++.. ++.||||++..... ....+++.+|++++.+++| ||||+++++|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 3456677899999999999997532 46899999854332 3445678999999999965 8999999999664
Q ss_pred -CeeEEEEEccCCCCHHHHHHhhccC-----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 043136 782 -ECTMLLYEYMPNGNLDDLLHAKNKG-----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNIL 849 (902)
Q Consensus 782 -~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NIL 849 (902)
+..|+|||||++|+|.++++..+.. ....+++..+..++.|||+||+|||+++ ||||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCcccee
Confidence 5789999999999999999764321 1235788999999999999999999776 999999999999
Q ss_pred EcCCCCEEEeecccceeccCCCC---ceeeccccCccccCccccccc
Q 043136 850 LDGEMEARVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 850 l~~~~~~kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+++++.+||+|||+|+.+..+.. ....+||+.|||||++.+...
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y 264 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 264 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCC
Confidence 99999999999999997754433 234679999999999976543
No 68
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=5.2e-34 Score=340.15 Aligned_cols=428 Identities=14% Similarity=0.089 Sum_probs=255.3
Q ss_pred CcccCchhhhccCCCcEEEccCCCC---CCCCCcccc------------cccccceeccccccccCCCchhhhcc--cCC
Q 043136 114 FDGPLQPAILELTKLRTIDISHNSF---NSTFPPGIS------------KLRFLRIFNAYSNSFTGPLPLEFVQL--NSL 176 (902)
Q Consensus 114 l~~~~~~~~~~l~~L~~L~Ls~N~l---~~~~p~~l~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L 176 (902)
+....+..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+... .+|
T Consensus 61 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L 140 (592)
T 3ogk_B 61 YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDL 140 (592)
T ss_dssp GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGC
T ss_pred cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccC
Confidence 3344455677899999999988632 134444333 67888888888888877777777664 448
Q ss_pred cEEeccCcc-CcC-CCCcccCCCCCCCEEEccCCCccCC----CCccccCCCCCcEEEeeCcccCC----CCChhccCCC
Q 043136 177 QQLNLGGSY-FDG-EIPSDYRNLSSLRFLDLAGNSLTGS----LPPQLGLLTQLERIEIGYNNLQG----EVPVEFASLV 246 (902)
Q Consensus 177 ~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~ 246 (902)
++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.+++
T Consensus 141 ~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~ 220 (592)
T 3ogk_B 141 ETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCR 220 (592)
T ss_dssp CEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCT
T ss_pred cEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCC
Confidence 888888776 211 1222234678888888888887755 33345567888888888888873 3344456778
Q ss_pred CCCEEEccCccCcccCCccccCCCCccEEecCCCccc---eecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEE
Q 043136 247 NLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFT---GEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRL 323 (902)
Q Consensus 247 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 323 (902)
+|++|+|++|.+.+ +|..+.++++|++|+++..... +..+..+..+++|+.|+++++.. +.+|..+..+++|++|
T Consensus 221 ~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L 298 (592)
T 3ogk_B 221 SLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKL 298 (592)
T ss_dssp TCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEE
T ss_pred CCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEE
Confidence 88888888888775 5677778888888888753322 23334566677778887777543 3566677777777777
Q ss_pred EccCccccccCC-hhhhhccccceEEecCceeccccCccccCCCceeEEEecC-----------CcccCCCCCCccCCCC
Q 043136 324 SLMNNVLFGEIP-QDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSS-----------NSLTGPIPPTICDGDR 391 (902)
Q Consensus 324 ~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~-----------N~l~~~~p~~~~~~~~ 391 (902)
+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|+.|++++ |.+++.
T Consensus 299 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~---------- 368 (592)
T 3ogk_B 299 DLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR---------- 368 (592)
T ss_dssp EETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH----------
T ss_pred ecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH----------
Confidence 777777654433 2345667777777773322223333334556666666662 333211
Q ss_pred ccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCC-CCCCcEEEcc----CcccCCC-----CCCcCccc
Q 043136 392 LFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGL-LPNLTFMDMS----RNSLSGE-----IPRDLGNA 461 (902)
Q Consensus 392 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l 461 (902)
.++.....+++|++|+++.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++
T Consensus 369 -------------~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~ 435 (592)
T 3ogk_B 369 -------------GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGC 435 (592)
T ss_dssp -------------HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHC
T ss_pred -------------HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhC
Confidence 11222334666667777666666555555544 6666777664 5555542 22334556
Q ss_pred CcCceeccccc--ccCCCcChhhhc-ccccceeccCCCccCC-Cccccc-ccccccEEeccCcccccc-CCccccccccc
Q 043136 462 QKLEYLNISEN--SFQTSLPSNIWS-APNLKILSASSSKLTG-KIPDFI-GCKSIYKIELHNNLLNGS-IPWDIGHCEKL 535 (902)
Q Consensus 462 ~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~ls~N~l~~-~~p~~~-~~~~l~~l~Ls~N~l~g~-ip~~~~~l~~L 535 (902)
++|+.|+|+.| .+++..+..+.. +++|+.|++++|++++ .++.+. ++++|++|+|++|.+++. ++..+..+++|
T Consensus 436 ~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L 515 (592)
T 3ogk_B 436 KKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSL 515 (592)
T ss_dssp TTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSC
T ss_pred CCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCcc
Confidence 66666666532 244444444433 5666666666666554 222222 255566666666665433 23333455666
Q ss_pred eEEEeeCCcceecCCCCC-CCCCcccEEEccC
Q 043136 536 LLLNLSRNSLTGIIPWEI-SGLPSITDVDLSH 566 (902)
Q Consensus 536 ~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~ 566 (902)
++|+|++|++++.--..+ ..++.+....+..
T Consensus 516 ~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 516 RYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 666666666554322222 2345444444443
No 69
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.97 E-value=3.4e-32 Score=316.29 Aligned_cols=170 Identities=24% Similarity=0.287 Sum_probs=142.2
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhh---HHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKEN---IRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~---~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
|.+.++||+|+||+||+|+.. +|+.||||++.+..... .........++++++.++|||||+++++|++.+..|+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 445689999999999999764 68999999996433221 11122223456778888999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
||||+||+|.+++...+ .+++.....++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+.+
T Consensus 271 mEy~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp ECCCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999998654 3778888899999999999999666 999999999999999999999999999987
Q ss_pred cCCCCceeeccccCccccCcccc
Q 043136 868 QSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 868 ~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
.... ..+.+||+.|||||++..
T Consensus 343 ~~~~-~~t~~GTp~YmAPEvl~~ 364 (689)
T 3v5w_A 343 SKKK-PHASVGTHGYMAPEVLQK 364 (689)
T ss_dssp SSCC-CCSCCSCGGGCCHHHHST
T ss_pred CCCC-CCCccCCcCccCHHHHhC
Confidence 5443 456799999999999964
No 70
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=299.59 Aligned_cols=171 Identities=23% Similarity=0.367 Sum_probs=143.2
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec------CCe
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN------REC 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~------~~~ 783 (902)
.|.+.+.||+|+||+||+|++ .+|+.||||++.+... .....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 355668999999999999976 4699999999964432 33445678899999999999999999998754 357
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+|||||+ |+|.+++...+ .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecce
Confidence 899999995 78999986543 4788889999999999999999776 99999999999999999999999999
Q ss_pred ceeccC-----CCCceeeccccCccccCccccc
Q 043136 864 AKLIQS-----DESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~-----~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+.+.. .....+.+||+.|||||++.+.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~ 237 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCC
Confidence 987632 2234567999999999998764
No 71
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.97 E-value=3.2e-31 Score=292.99 Aligned_cols=166 Identities=24% Similarity=0.378 Sum_probs=138.9
Q ss_pred HhccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCee
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~ 784 (902)
..|.+.+.||+|+||+||+|+.+ +++.||+|++.+... ..++.+|+++++.+ +|||||++++++.+.++.
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 35677899999999999999653 478899999854332 23467899999988 699999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-CCEEEeeccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE-MEARVADFGV 863 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGl 863 (902)
|+||||++||+|.++++ .+++.....++.|++.||+|||+++ ||||||||+|||++.+ +.+||+|||+
T Consensus 96 ~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 99999999999999984 2567788899999999999999776 9999999999999877 7999999999
Q ss_pred ceeccCCC-----------------------------CceeeccccCccccCccccc
Q 043136 864 AKLIQSDE-----------------------------SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~~-----------------------------~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+...+.. ...+.+||+.|||||++.+.
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 221 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC 221 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 98653221 12345899999999999764
No 72
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=289.16 Aligned_cols=281 Identities=19% Similarity=0.250 Sum_probs=142.3
Q ss_pred cccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEe
Q 043136 150 RFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEI 229 (902)
Q Consensus 150 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 229 (902)
+.....++++|.++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 31 ~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 333445555555553 333332 25555555555555444445555555555555555555544555555555555555
Q ss_pred eCcccCCCCChhccCCCCCCEEEccCccCcccCC-ccccCCCCccEEecCCC-ccceecCCCCCCcCcCcEEecccCCCc
Q 043136 230 GYNNLQGEVPVEFASLVNLKYMDISACNLSGTLP-SEISNLTKLEMLLLFKN-HFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 230 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++| .+.+..+..|.++++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 5555554444445555555555555555553222 24555555555555555 344444445555555555555555555
Q ss_pred cccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCcc
Q 043136 308 GPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTIC 387 (902)
Q Consensus 308 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 387 (902)
+..|..+..+++|++|++++|.+ +...+..+..+++|+.|++++|++++..+..+.
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l------------------------~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQH------------------------ILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCS------------------------TTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHHhccccCCeecCCCCcc------------------------ccchhhhhhhcccccEEECCCCccccccccccc
Confidence 54455555555555555555554 332222233344555555555555443222211
Q ss_pred CCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCC----CCCcccCCCCCCcEEEccCcccCCCCCCc-CcccC
Q 043136 388 DGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNG----SIPQGFGLLPNLTFMDMSRNSLSGEIPRD-LGNAQ 462 (902)
Q Consensus 388 ~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 462 (902)
. ....+.++.++|++|.+++ .+|.++..+++|++|||++|+++. +|.. |.+++
T Consensus 244 ~---------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~ 301 (353)
T 2z80_A 244 T---------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLT 301 (353)
T ss_dssp ------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCT
T ss_pred c---------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCC
Confidence 1 0112334444555554443 345556666666666666666663 3333 46666
Q ss_pred cCceecccccccCCCcC
Q 043136 463 KLEYLNISENSFQTSLP 479 (902)
Q Consensus 463 ~L~~L~Ls~N~l~~~~p 479 (902)
+|++|+|++|.+.+..|
T Consensus 302 ~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 302 SLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TCCEEECCSSCBCCCHH
T ss_pred CCCEEEeeCCCccCcCC
Confidence 66666666666665443
No 73
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=5.4e-30 Score=281.16 Aligned_cols=288 Identities=19% Similarity=0.261 Sum_probs=217.2
Q ss_pred HHhCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCccccEEecCCCCCEEEEEcCCCCcccc----cCccc--cCCCCCCEE
Q 043136 34 KASLKDPFNNSFHDWDATPAFSNPSSEQEPVWCSWSGIKCNPKSSQITSLDLSRRSLSGP----IPPEI--RYLTSLTHL 107 (902)
Q Consensus 34 k~~~~~~~~~~l~~W~~~~~~~~~~~~~~~~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~----~~~~~--~~l~~L~~L 107 (902)
|.++.++.. ++..|+..- ..++|.|.++.|...... -.-+...|. ++..+ ...+++++|
T Consensus 22 ~~~~~~~~~-aLl~~k~~~---------~~~~~~~~~~w~~~~~~~-----~~~~~~~g~~~~~~~~~l~~~~~~~l~~L 86 (328)
T 4fcg_A 22 STALRPYHD-VLSQWQRHY---------NADRNRWHSAWRQANSNN-----PQIETRTGRALKATADLLEDATQPGRVAL 86 (328)
T ss_dssp -CCCCCHHH-HHHHHHHHH---------HHCCTTHHHHHHHHTTTC-----TTSCCSHHHHHHHHHHHHHHHTSTTCCEE
T ss_pred cccCchHHH-HHHHHHHhc---------cCCchhhhhhhccccccc-----ccccccCCcchhhhHHHHhcccccceeEE
Confidence 334444444 677887531 013799999988433210 011122221 11111 234677777
Q ss_pred EccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCc
Q 043136 108 NLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFD 187 (902)
Q Consensus 108 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 187 (902)
+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.+.
T Consensus 87 ~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~ 163 (328)
T 4fcg_A 87 ELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPEL 163 (328)
T ss_dssp EEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTC
T ss_pred EccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCc
Confidence 77777777 56666777777777777777777 66666777777777777777666 55666666666666666666666
Q ss_pred CCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCcccc
Q 043136 188 GEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEIS 267 (902)
Q Consensus 188 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 267 (902)
+.+|..+... .++..|..+++|++|++++|+|+ .+|..+..+++|++|+|++|++++ +|..+.
T Consensus 164 ~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 164 TELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp CCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG
T ss_pred cccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc
Confidence 6666544321 12234567999999999999999 789999999999999999999995 666899
Q ss_pred CCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceE
Q 043136 268 NLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTL 347 (902)
Q Consensus 268 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 347 (902)
.+++|++|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+.+
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l 306 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCII 306 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEE
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCceecc
Q 043136 348 LLWNNHLTG 356 (902)
Q Consensus 348 ~L~~N~l~~ 356 (902)
++..|.+..
T Consensus 307 ~l~~~~~~~ 315 (328)
T 4fcg_A 307 LVPPHLQAQ 315 (328)
T ss_dssp ECCGGGSCC
T ss_pred eCCHHHHHH
Confidence 999887653
No 74
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.2e-30 Score=280.56 Aligned_cols=248 Identities=22% Similarity=0.244 Sum_probs=124.3
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCC--CChhccCCCCCCEEEcc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGE--VPVEFASLVNLKYMDIS 254 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls 254 (902)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++.. .|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45666666665 3444332 4566666666666633333455666666666666665522 24445555555555555
Q ss_pred CccCcccCCccccCCCCccEEecCCCccceecC-CCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccccc
Q 043136 255 ACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIP-VSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGE 333 (902)
Q Consensus 255 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 333 (902)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|++|++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l-------- 157 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM-------- 157 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC--------
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC--------
Confidence 55555 234445555555555555555553332 34444555555555555544444444444444444444
Q ss_pred CChhhhhccccceEEecCceecc-ccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccc
Q 043136 334 IPQDIELLADLDTLLLWNNHLTG-VLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVN 412 (902)
Q Consensus 334 ~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~ 412 (902)
++|.+++ ..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..
T Consensus 158 ----------------~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 158 ----------------AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp ----------------TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred ----------------CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 4444443 34444445555555555555554443444433333444444444443333334444
Q ss_pred cCCCcEEEccCCccCCCCCcccCCCC-CCcEEEccCcccCC
Q 043136 413 CSSLSRLRIQDNQLNGSIPQGFGLLP-NLTFMDMSRNSLSG 452 (902)
Q Consensus 413 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 452 (902)
+++|+.|+|++|++++..|..+..++ +|++|+|++|.+++
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 55555555555555555555555553 55555555555543
No 75
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.9e-31 Score=291.02 Aligned_cols=250 Identities=19% Similarity=0.160 Sum_probs=183.4
Q ss_pred hhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccc-cCCCchhhh-------cccCCcEEeccCccCcCCCCc
Q 043136 121 AILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSF-TGPLPLEFV-------QLNSLQQLNLGGSYFDGEIPS 192 (902)
Q Consensus 121 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~ 192 (902)
.++..++|++|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 355667778888888887 566665544 78888888887 455666665 688888888888888888888
Q ss_pred cc--CCCCCCCEEEccCCCccCCCCccccCC-----CCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCccc--CC
Q 043136 193 DY--RNLSSLRFLDLAGNSLTGSLPPQLGLL-----TQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGT--LP 263 (902)
Q Consensus 193 ~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p 263 (902)
.+ ..+++|++|+|++|++++. |..++.+ ++|++|++++|+|++..|..|+.+++|++|+|++|++.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8888888888888888876 7777776 8888888888888887778888888888888888887765 23
Q ss_pred ccc--cCCCCccEEecCCCcccee--cC-CCCCCcCcCcEEecccCCCccccC-ccccccCCCCEEEccCccccccCChh
Q 043136 264 SEI--SNLTKLEMLLLFKNHFTGE--IP-VSYGNLQALQVLDLSDNQLSGPIP-ASLASLKGLTRLSLMNNVLFGEIPQD 337 (902)
Q Consensus 264 ~~~--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~ 337 (902)
..+ .++++|++|+|++|++++. ++ ..+.++++|++|+|++|++++.+| ..+..+++|++|+|++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 333 6778888888888887731 12 234566778888888888877664 44556777777777777776 56655
Q ss_pred hhhccccceEEecCceeccccCccccCCCceeEEEecCCcccC
Q 043136 338 IELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTG 380 (902)
Q Consensus 338 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 380 (902)
+. ++|++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 54 6677777777777665 44 6666777777777776664
No 76
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=1.2e-30 Score=305.96 Aligned_cols=173 Identities=24% Similarity=0.360 Sum_probs=151.1
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+.+..|+|||
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 466778999999999999976 468999999985443 2345668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC--CCEEEeecccceec
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE--MEARVADFGVAKLI 867 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~--~~~kl~DFGla~~~ 867 (902)
||+||+|.+++.... ..+++.....++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 235 ~~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 235 FMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp CCCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred ecCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999986432 24778888999999999999999776 9999999999999854 89999999999998
Q ss_pred cCCCCceeeccccCccccCccccccc
Q 043136 868 QSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 868 ~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.........+||+.|||||++.+..+
T Consensus 308 ~~~~~~~~~~GT~~y~APEv~~~~~y 333 (573)
T 3uto_A 308 DPKQSVKVTTGTAEFAAPEVAEGKPV 333 (573)
T ss_dssp CTTSEEEEECSSGGGCCHHHHTTCCB
T ss_pred cCCCceeeeEECccccCHHHhCCCCC
Confidence 77777788899999999999987543
No 77
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.4e-30 Score=278.51 Aligned_cols=255 Identities=23% Similarity=0.263 Sum_probs=153.3
Q ss_pred EEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccc
Q 043136 81 TSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSN 160 (902)
Q Consensus 81 ~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 160 (902)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|+.+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777777 355433 468888888888888777777788888888888888777666666666666666666666
Q ss_pred c-ccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCC
Q 043136 161 S-FTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVP 239 (902)
Q Consensus 161 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 239 (902)
. ++...|..|..+++|++|+|++|.+++..|..|.++++|++|+|+ +|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~------------------------~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ------------------------DNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC------------------------SSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECC------------------------CCcccccCH
Confidence 5 544445555555555555555555554444444444445555544 444444444
Q ss_pred hhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCC
Q 043136 240 VEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKG 319 (902)
Q Consensus 240 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 319 (902)
..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 44555555555555555555444445555566666666666666555666666666666666666666555555666666
Q ss_pred CCEEEccCccccccCChhhhhccccceEEecCceeccccCcccc
Q 043136 320 LTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLG 363 (902)
Q Consensus 320 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 363 (902)
|++|++++|.+....+.. .....++.+..+.+.+....|..+.
T Consensus 227 L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 666666666665433321 1223344455566666666666554
No 78
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1e-29 Score=292.26 Aligned_cols=244 Identities=22% Similarity=0.268 Sum_probs=157.8
Q ss_pred EEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccc
Q 043136 83 LDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSF 162 (902)
Q Consensus 83 L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 162 (902)
++.++.+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 444555555 4555443 5778888888888877777788888888888888887777667777777777777777777
Q ss_pred cCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccC-CCccCCCCccccCCCCCcEEEeeCcccCCCCChh
Q 043136 163 TGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAG-NSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVE 241 (902)
Q Consensus 163 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 241 (902)
++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++ |.++...+..|..+++|++|+|++|++++. | .
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~ 213 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-N 213 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-C
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-c
Confidence 766666677777777777777777655555666777777777766 334333333466666666666666666643 2 3
Q ss_pred ccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCC
Q 043136 242 FASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLT 321 (902)
Q Consensus 242 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 321 (902)
+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 55566666666666666665566666666666666666666655555566666666666666666655555555555555
Q ss_pred EEEccCcccc
Q 043136 322 RLSLMNNVLF 331 (902)
Q Consensus 322 ~L~L~~N~l~ 331 (902)
.|+|++|.+.
T Consensus 294 ~L~L~~Np~~ 303 (452)
T 3zyi_A 294 ELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcC
Confidence 5555555543
No 79
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=6e-32 Score=294.89 Aligned_cols=249 Identities=18% Similarity=0.183 Sum_probs=118.0
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCCEEEccCCCC-cccCchhhh-------ccCCCcEEEccCCCCCCCCCccc--cc
Q 043136 79 QITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAF-DGPLQPAIL-------ELTKLRTIDISHNSFNSTFPPGI--SK 148 (902)
Q Consensus 79 ~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l-~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~~l--~~ 148 (902)
+++.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ +.
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 344445555555 344433332 45555555555 233444333 45555555555555555455443 44
Q ss_pred ccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEE
Q 043136 149 LRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIE 228 (902)
Q Consensus 149 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 228 (902)
+++|++|+|++|++++. |..++.+. ...+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~-------------------~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 179 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQ-------------------QWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLD 179 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHH-------------------TTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEE
T ss_pred CCCccEEEccCCCCcch-hHHHHHHH-------------------HhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEE
Confidence 55555555555555544 44444440 00004444444444444444444444444555555
Q ss_pred eeCcccCCC--CChhc--cCCCCCCEEEccCccCcc---cCCccccCCCCccEEecCCCccceecC-CCCCCcCcCcEEe
Q 043136 229 IGYNNLQGE--VPVEF--ASLVNLKYMDISACNLSG---TLPSEISNLTKLEMLLLFKNHFTGEIP-VSYGNLQALQVLD 300 (902)
Q Consensus 229 L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 300 (902)
+++|++.+. .|..+ ..+++|++|+|++|++++ .....+.++++|++|+|++|++++..| ..+..+++|++|+
T Consensus 180 Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 259 (312)
T 1wwl_A 180 LSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLN 259 (312)
T ss_dssp CCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEE
T ss_pred CCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEE
Confidence 555444432 12222 445555555555555542 111223344555555555555554443 2334455555555
Q ss_pred cccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceecc
Q 043136 301 LSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTG 356 (902)
Q Consensus 301 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 356 (902)
|++|+|+ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 260 Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 260 LSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5555555 4444443 4555555555555543 33 5555555566666655543
No 80
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.3e-29 Score=272.86 Aligned_cols=237 Identities=21% Similarity=0.204 Sum_probs=193.4
Q ss_pred ccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCC-ccCCCCccccCCCCCcEEEe
Q 043136 151 FLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNS-LTGSLPPQLGLLTQLERIEI 229 (902)
Q Consensus 151 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 229 (902)
+|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 44444555555554455566666777777777777776667777778888888888886 77666778888888888888
Q ss_pred eCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccc
Q 043136 230 GYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGP 309 (902)
Q Consensus 230 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 309 (902)
++|++++..|..|..+++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 88888888888899999999999999999987778899999999999999999987777899999999999999999999
Q ss_pred cCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccC
Q 043136 310 IPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICD 388 (902)
Q Consensus 310 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 388 (902)
.|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+....+.. .....++.+..+.+.+....|..+..
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhCC
Confidence 9999999999999999999999877778999999999999999998644322 12234555667788888888876543
No 81
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=286.42 Aligned_cols=244 Identities=23% Similarity=0.299 Sum_probs=143.4
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNS 161 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 161 (902)
.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3444555565 5666554 678888888888888777788888888888888888877666666666666666666666
Q ss_pred ccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCC-CccCCCCccccCCCCCcEEEeeCcccCCCCCh
Q 043136 162 FTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGN-SLTGSLPPQLGLLTQLERIEIGYNNLQGEVPV 240 (902)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 240 (902)
+++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .++...+..|..+++|++|+|++|+++. +|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 66555556666666666666666666555555666666666666653 3332223345555555555555555552 23
Q ss_pred hccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCC
Q 043136 241 EFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGL 320 (902)
Q Consensus 241 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 320 (902)
.+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 24445555555555555554445555555555555555555554444445555555555555555544444444444444
Q ss_pred CEEEccCccc
Q 043136 321 TRLSLMNNVL 330 (902)
Q Consensus 321 ~~L~L~~N~l 330 (902)
+.|+|++|.+
T Consensus 282 ~~L~L~~Np~ 291 (440)
T 3zyj_A 282 ERIHLHHNPW 291 (440)
T ss_dssp CEEECCSSCE
T ss_pred CEEEcCCCCc
Confidence 4444444444
No 82
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.4e-30 Score=282.88 Aligned_cols=269 Identities=18% Similarity=0.167 Sum_probs=217.7
Q ss_pred CEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccc
Q 043136 79 QITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAY 158 (902)
Q Consensus 79 ~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 158 (902)
+.+.++++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ ++.+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 56777888888876666677788899999999999999888899999999999999999987655 8899999999999
Q ss_pred cccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCC
Q 043136 159 SNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEV 238 (902)
Q Consensus 159 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 238 (902)
+|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..|..++.+++|++|++++|++++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99988543 3478999999999988665543 577899999999998877778888889999999999988877
Q ss_pred Chhcc-CCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCcccccc
Q 043136 239 PVEFA-SLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASL 317 (902)
Q Consensus 239 p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 317 (902)
+..+. .+++|++|+|++|.+++. | ....+++|++|+|++|++++. |..+..+++|++|+|++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 77764 688899999999988865 3 233588888888888888854 445888888888888888888 467778888
Q ss_pred CCCCEEEccCcccc-ccCChhhhhccccceEEec-CceeccccCcc
Q 043136 318 KGLTRLSLMNNVLF-GEIPQDIELLADLDTLLLW-NNHLTGVLPQK 361 (902)
Q Consensus 318 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~-~N~l~~~~~~~ 361 (902)
++|+.|++++|.+. +.+|..+..+++|+.++++ .+.+++..|..
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 88888888888887 6777778888888888887 44566554443
No 83
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=282.50 Aligned_cols=245 Identities=23% Similarity=0.272 Sum_probs=165.0
Q ss_pred CCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccC
Q 043136 104 LTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGG 183 (902)
Q Consensus 104 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 183 (902)
.+.++.+++.++. +|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLRE-VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSS-CCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCc-CCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 4578888888874 555443 6788899999998887778888888888888888888877777888888888888888
Q ss_pred ccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCc-ccCCCCChhccCCCCCCEEEccCccCcccC
Q 043136 184 SYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYN-NLQGEVPVEFASLVNLKYMDISACNLSGTL 262 (902)
Q Consensus 184 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 262 (902)
|++++..+..|.++++|++|+|++|+++...+..|..+++|++|++++| .++...+..|.++++|++|+|++|+++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 8887666667777888888888888877666667777777777777763 344344446677777777777777776 33
Q ss_pred CccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhcc
Q 043136 263 PSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLA 342 (902)
Q Consensus 263 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 342 (902)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 355666666666666666665566666666666666666666655555555555555555555555544333333333
Q ss_pred ccceEEecCce
Q 043136 343 DLDTLLLWNNH 353 (902)
Q Consensus 343 ~L~~L~L~~N~ 353 (902)
+|+.|+|++|.
T Consensus 280 ~L~~L~L~~Np 290 (440)
T 3zyj_A 280 HLERIHLHHNP 290 (440)
T ss_dssp TCCEEECCSSC
T ss_pred CCCEEEcCCCC
Confidence 33333333333
No 84
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.5e-30 Score=284.55 Aligned_cols=266 Identities=18% Similarity=0.178 Sum_probs=176.0
Q ss_pred EEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCc
Q 043136 298 VLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNS 377 (902)
Q Consensus 298 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~ 377 (902)
.++++.+.+...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 33444444433333333344445555555555544444444455555555555555544333 4445555555555555
Q ss_pred ccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCc
Q 043136 378 LTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRD 457 (902)
Q Consensus 378 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 457 (902)
+++.. ..++|++|++++|++++..+. .+++|++|++++|++++..|..
T Consensus 92 l~~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~ 139 (317)
T 3o53_A 92 VQELL-----------------------------VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLD 139 (317)
T ss_dssp EEEEE-----------------------------ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBC
T ss_pred ccccc-----------------------------CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchh
Confidence 44211 124566666666666544332 2456667777777776666666
Q ss_pred CcccCcCceecccccccCCCcChhhh-cccccceeccCCCccCCCcccccccccccEEeccCccccccCCccccccccce
Q 043136 458 LGNAQKLEYLNISENSFQTSLPSNIW-SAPNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLL 536 (902)
Q Consensus 458 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~ 536 (902)
+..+++|++|+|++|++++..|..+. .+++|++|++++|++++. |....+++|+.|+|++|++++ +|..+..+++|+
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~ 217 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVT 217 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCS
T ss_pred hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCc-chhhhcccCccc
Confidence 66677777777777777666565553 567777777777777654 444457888899999999974 566699999999
Q ss_pred EEEeeCCcceecCCCCCCCCCcccEEEccCCccc-ccCCCCCcCCccceeeccc-CCcccccCCCC
Q 043136 537 LLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLT-GTIPSNFENCSTLESFNVS-YNLLTGPIPAS 600 (902)
Q Consensus 537 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~l~ls-~N~l~g~ip~~ 600 (902)
.|+|++|+|++ +|..+..+++|+.|+|++|.++ +.+|..+..++.|+.++++ .+.++|..|..
T Consensus 218 ~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 218 WISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp EEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred EEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 99999999995 6788999999999999999999 8889999999999999999 66788877764
No 85
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1e-28 Score=284.06 Aligned_cols=228 Identities=18% Similarity=0.143 Sum_probs=173.5
Q ss_pred ceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEcc
Q 043136 367 KLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMS 446 (902)
Q Consensus 367 ~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 446 (902)
+++.|+|++|++++..|..|..+++|++|++++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44555555555555555555555555555555555555556666777777777777777776666667777777777777
Q ss_pred CcccCCCCCCcCcccCcCceeccccc-ccCCCcChhhhcccccceeccCCCccCCCcccccccccccEEeccCccccccC
Q 043136 447 RNSLSGEIPRDLGNAQKLEYLNISEN-SFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSI 525 (902)
Q Consensus 447 ~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~i 525 (902)
+|++++..+..|.++++|++|+|++| .+....+..+..+++|++|++++|++++ +|.+..+.+|+.|+|++|.+++..
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEEC
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccC
Confidence 77777666667777777777777774 4433333457777888888888888875 466666888999999999999888
Q ss_pred CccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccc
Q 043136 526 PWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTG 595 (902)
Q Consensus 526 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g 595 (902)
|..|..+++|+.|+|++|++++..|..|.++++|+.|||++|+|++..+..|..+++|+.|+|++|++..
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 9999999999999999999999999999999999999999999998777888999999999999998753
No 86
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.3e-29 Score=293.93 Aligned_cols=292 Identities=24% Similarity=0.318 Sum_probs=172.5
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCccccEEe------cCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCccc
Q 043136 44 SFHDWDATPAFSNPSSEQEPVWCSWSGIKC------NPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGP 117 (902)
Q Consensus 44 ~l~~W~~~~~~~~~~~~~~~~~C~w~Gv~c------~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~ 117 (902)
.+++|... . +||.|.|..| ......++.|++++++++ .+|..+. ++|++|+|++|.|+.
T Consensus 11 ~w~~W~~~------~-----~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~- 75 (622)
T 3g06_A 11 VWSAWRRA------A-----PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS- 75 (622)
T ss_dssp HHHHHHHT------C-----CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-
T ss_pred HHHHHHhc------C-----CcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-
Confidence 55677654 2 3899976532 111235788999999888 6777665 788888888888884
Q ss_pred CchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCC
Q 043136 118 LQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNL 197 (902)
Q Consensus 118 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 197 (902)
+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+++..+ .+++|+.|+|++|++++ +|.. +
T Consensus 76 lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l 140 (622)
T 3g06_A 76 LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---P 140 (622)
T ss_dssp CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---C
T ss_pred CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---C
Confidence 444 56788888888888874 444 55667777777776665322 44566666666666653 3332 3
Q ss_pred CCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEec
Q 043136 198 SSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLL 277 (902)
Q Consensus 198 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 277 (902)
++|++|+|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|++|+|++|++++ +|.. +++|+.|++
T Consensus 141 ~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L 208 (622)
T 3g06_A 141 PGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWA 208 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEEC
Confidence 556666666666653 332 22445555555555553 33 234455555555555553 2221 244555555
Q ss_pred CCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccc
Q 043136 278 FKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGV 357 (902)
Q Consensus 278 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 357 (902)
++|.++ .+| .. +++|+.|+|++|.+++ +| ..+++|+.|+|++|+|++
T Consensus 209 ~~N~l~-~l~------------------------~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~- 255 (622)
T 3g06_A 209 YNNRLT-SLP------------------------AL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS- 255 (622)
T ss_dssp CSSCCS-SCC------------------------CC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred cCCccc-ccC------------------------CC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-
Confidence 555544 222 21 2445555555555443 33 233455555555555553
Q ss_pred cCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccC
Q 043136 358 LPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCS 414 (902)
Q Consensus 358 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~ 414 (902)
+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.+++..|..+..++
T Consensus 256 lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 256 LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 222 3456677777777776 5666777777777777777777777777766554
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=6e-29 Score=277.68 Aligned_cols=178 Identities=22% Similarity=0.338 Sum_probs=152.5
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 3556789999999999999764 588999999854432223334668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|++||+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 96 ~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCTTEEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 999999999997542 3778888999999999999999776 99999999999999999999999999998876
Q ss_pred CCCceeeccccCccccCcccccccCce
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCFSVPF 896 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~~~p~ 896 (902)
.......+||+.|+|||++.+..+.++
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 194 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGY 194 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCB
T ss_pred CCceeccCCCccccCCeeeccCCCCCC
Confidence 666777899999999999976443333
No 88
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=4.5e-28 Score=258.48 Aligned_cols=216 Identities=24% Similarity=0.311 Sum_probs=133.9
Q ss_pred CCCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 64 VWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 64 ~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
++|.|.|+.|.... .++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+
T Consensus 3 ~~C~~~~~~C~c~~-~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 3 ALCKKDGGVCSCNN-NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCBGGGTCSBEEET-TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEeCC-CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 48999999987543 56789999999884 666554 678888888888887766677788888888888887775544
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQ 223 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 223 (902)
..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~------------ 146 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ------------ 146 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC------------
Confidence 44566666666666666665555555555555555555555555444444455555555555555554
Q ss_pred CcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEeccc
Q 043136 224 LERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSD 303 (902)
Q Consensus 224 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 303 (902)
+..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 147 ------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 147 ------------SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp ------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ------------ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecC
Confidence 44344445555555555555555544444455555555555555555544444455566666666666
Q ss_pred CCCc
Q 043136 304 NQLS 307 (902)
Q Consensus 304 N~l~ 307 (902)
|.+.
T Consensus 215 N~~~ 218 (270)
T 2o6q_A 215 NPWD 218 (270)
T ss_dssp SCBC
T ss_pred CCee
Confidence 6654
No 89
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96 E-value=1.3e-28 Score=269.88 Aligned_cols=173 Identities=27% Similarity=0.345 Sum_probs=151.3
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|++ .+++.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 55668999999999999976 5799999999854432 334556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++...+ .+++.....++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 96 ASGGEVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp CTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999997653 3677888899999999999999776 999999999999999999999999999887666
Q ss_pred CCceeeccccCccccCccccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
......+||+.|+|||++.+...
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~ 190 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKY 190 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCC
T ss_pred CccccccCCcceeCcccccCCCc
Confidence 66667789999999999976543
No 90
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.95 E-value=2.6e-28 Score=268.46 Aligned_cols=173 Identities=24% Similarity=0.258 Sum_probs=147.4
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||+||+|+.. +++.||+|++.+.........+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~ 86 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence 455689999999999999764 6899999998543322223345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc-C
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ-S 869 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~-~ 869 (902)
++||+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+||+++.+|.+||+|||+|+... .
T Consensus 87 ~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 87 ANGGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp CTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999987643 3677888899999999999999776 9999999999999999999999999998643 3
Q ss_pred CCCceeeccccCccccCcccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.......+||+.|+|||++.+..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~ 181 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDND 181 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSC
T ss_pred CCcccccccChhhCChhhhcCCC
Confidence 34456678999999999997653
No 91
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.9e-27 Score=279.06 Aligned_cols=268 Identities=31% Similarity=0.409 Sum_probs=147.2
Q ss_pred cCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEc
Q 043136 174 NSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDI 253 (902)
Q Consensus 174 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 253 (902)
.+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 34666777776666 5555444 56777777777766 3444 45667777777777663 333 5566777777
Q ss_pred cCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccccc
Q 043136 254 SACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGE 333 (902)
Q Consensus 254 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 333 (902)
++|++++ +|. .+++|++|++++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 7776664 333 45666667777776663 3432 3566677777776664 332 23456666666666654
Q ss_pred CChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccccc
Q 043136 334 IPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNC 413 (902)
Q Consensus 334 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l 413 (902)
+| ..+++|+.|++++|+|++. |.. .++|+.|++++|+++. +|.. .++|+.|++++|++++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~l-~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCCC-CCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 33 2345566666666666542 221 2456666666666652 2221 1344444444444443 33 223
Q ss_pred CCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcc
Q 043136 414 SSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSA 485 (902)
Q Consensus 414 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 485 (902)
++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|.+++.+|..+..+
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 45555555555555 2333 3455555555555555 445555555555555555555555544444433
No 92
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.95 E-value=2.1e-28 Score=270.90 Aligned_cols=174 Identities=25% Similarity=0.324 Sum_probs=143.3
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|+++++.+ +||||+++++++.+.+..|+||
T Consensus 24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~ 103 (353)
T 3txo_A 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103 (353)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence 4556789999999999999764 5899999998654333334456678899999988 7999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||++||+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 104 E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 104 EFVNGGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999997653 3778888999999999999999776 9999999999999999999999999998643
Q ss_pred -CCCCceeeccccCccccCcccccc
Q 043136 869 -SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 -~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|||||++.+..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~ 200 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEML 200 (353)
T ss_dssp C---------CCGGGCCHHHHHHHH
T ss_pred cCCccccccCCCcCeEChhhcCCCC
Confidence 333455678999999999987653
No 93
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.1e-28 Score=285.55 Aligned_cols=238 Identities=18% Similarity=0.158 Sum_probs=178.9
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|.|++..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 344488899999988888888888888888999998888887665 8888888888888888876443 377888
Q ss_pred EeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhcc-CCCCCCEEEccCcc
Q 043136 179 LNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFA-SLVNLKYMDISACN 257 (902)
Q Consensus 179 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~ 257 (902)
|+|++|.+++..+.. +++|++|+|++|.+++..|..++.+++|++|+|++|.|++.+|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 888888887665543 46788888888888877777778888888888888888877777765 67788888888888
Q ss_pred CcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccc-ccCCh
Q 043136 258 LSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLF-GEIPQ 336 (902)
Q Consensus 258 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~ 336 (902)
+++..+ +..+++|++|+|++|+|++.. ..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 876532 335777888888888877543 347777778888888888774 5666777777777777777776 55566
Q ss_pred hhhhccccceEEec
Q 043136 337 DIELLADLDTLLLW 350 (902)
Q Consensus 337 ~~~~l~~L~~L~L~ 350 (902)
.+..++.|+.++++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 66666666666654
No 94
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.95 E-value=2.6e-28 Score=273.41 Aligned_cols=173 Identities=23% Similarity=0.284 Sum_probs=146.8
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|...++||+|+||+||+|+.. +++.||+|++.+.........+.+.+|..++.++ +||||+++++++.+.+..|+|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 456689999999999999765 5789999999655444444455678899999876 89999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec-c
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI-Q 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~-~ 868 (902)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.. .
T Consensus 134 ~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 134 YVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp CCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred cCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999987653 3778888999999999999999776 999999999999999999999999999863 3
Q ss_pred CCCCceeeccccCccccCcccccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|||||++.+..
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~ 229 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGED 229 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCC
T ss_pred CCCccccccCCcccCCchhhcCCC
Confidence 444566789999999999997753
No 95
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.5e-29 Score=285.99 Aligned_cols=234 Identities=18% Similarity=0.174 Sum_probs=172.0
Q ss_pred CCCEEEccCccccccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEecc
Q 043136 319 GLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILF 398 (902)
Q Consensus 319 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~ 398 (902)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|+.|+|++|.|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~------------------- 93 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ------------------- 93 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-------------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-------------------
Confidence 55666666666555555555555555555555555554443 445555555555555444
Q ss_pred CCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCc
Q 043136 399 SNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSL 478 (902)
Q Consensus 399 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 478 (902)
+.. ..++|+.|++++|.|++..+. .+++|+.|+|++|++++..|..++++++|++|+|++|.+++.+
T Consensus 94 -----~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 94 -----ELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp -----EEE-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred -----CCC-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 222 126788888888888765543 3577888888888888887888888888888888888888877
Q ss_pred Chhhh-cccccceeccCCCccCCCcccccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCC
Q 043136 479 PSNIW-SAPNLKILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLP 557 (902)
Q Consensus 479 p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 557 (902)
|..+. .+++|+.|+|++|.+++. |....+++|+.|+|++|.+++ +|+.++.+++|+.|+|++|.|++ +|..++.++
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred hHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 87776 688888888888888865 444457888899999999886 55568889999999999999996 677788899
Q ss_pred cccEEEccCCccc-ccCCCCCcCCccceeeccc
Q 043136 558 SITDVDLSHNFLT-GTIPSNFENCSTLESFNVS 589 (902)
Q Consensus 558 ~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~l~ls 589 (902)
+|+.|+|++|.++ +.+|..+..++.|+.++++
T Consensus 238 ~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 9999999999998 7778888888888888876
No 96
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=2.6e-31 Score=316.94 Aligned_cols=448 Identities=15% Similarity=0.121 Sum_probs=258.3
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcc---cC------------chhhhccCCCc
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDG---PL------------QPAILELTKLR 129 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~---~~------------~~~~~~l~~L~ 129 (902)
|++|.++... ..+.+++.+..-. ..+..+..+++|++|+|+++.... .. +..+..+++|+
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 5689988221 3345666543322 122356778899999999875321 11 12234688999
Q ss_pred EEEccCCCCCCCCCcccc-cccccceeccccc-cccCC-CchhhhcccCCcEEeccCccCcCCCCccc----CCCCCCCE
Q 043136 130 TIDISHNSFNSTFPPGIS-KLRFLRIFNAYSN-SFTGP-LPLEFVQLNSLQQLNLGGSYFDGEIPSDY----RNLSSLRF 202 (902)
Q Consensus 130 ~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~~L~~ 202 (902)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 999999988877666665 6888999999888 45432 44555678889999998888776554443 35668888
Q ss_pred EEccCCC--ccC-CCCccccCCCCCcEEEeeCc-ccCCCCChhccCCCCCCEEEccCc-------cCcccCCccccCCCC
Q 043136 203 LDLAGNS--LTG-SLPPQLGLLTQLERIEIGYN-NLQGEVPVEFASLVNLKYMDISAC-------NLSGTLPSEISNLTK 271 (902)
Q Consensus 203 L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N-------~l~~~~p~~~~~l~~ 271 (902)
|+|++|. ++. .++..+..+++|++|++++| .+.+ +|..+..+++|++|+++.+ .+.+ ++..+.++++
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~ 266 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKE 266 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTT
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCC
Confidence 8888886 211 01112234578888888877 4443 6677777888888875443 3333 3335667777
Q ss_pred ccEE-ecCCCccceecCCCCCCcCcCcEEecccCCCccccC-ccccccCCCCEEEccCcccccc-CChhhhhccccceEE
Q 043136 272 LEML-LLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIP-ASLASLKGLTRLSLMNNVLFGE-IPQDIELLADLDTLL 348 (902)
Q Consensus 272 L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 348 (902)
|+.| .+.+... +.++..+..+++|++|+|++|.+++... ..+..+++|+.|++++| +... ++.....+++|+.|+
T Consensus 267 L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~ 344 (594)
T 2p1m_B 267 LRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELR 344 (594)
T ss_dssp CCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEE
T ss_pred cccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEE
Confidence 7777 3333322 2334444456677777777777654322 22446667777777766 3321 111223456666666
Q ss_pred ecC---------ceeccccCcccc-CCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccc-ccCCCc
Q 043136 349 LWN---------NHLTGVLPQKLG-SNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLV-NCSSLS 417 (902)
Q Consensus 349 L~~---------N~l~~~~~~~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~-~l~~L~ 417 (902)
+++ +.+++.....+. .+++ |+.|.+..|++++..+..+. .+++|+
T Consensus 345 L~~~~~~g~~~~~~l~~~~l~~l~~~~~~------------------------L~~L~~~~~~l~~~~~~~l~~~~~~L~ 400 (594)
T 2p1m_B 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPK------------------------LESVLYFCRQMTNAALITIARNRPNMT 400 (594)
T ss_dssp EECSCTTCSSCSSCCCHHHHHHHHHHCTT------------------------CCEEEEEESCCCHHHHHHHHHHCTTCC
T ss_pred EecCcccccccCCCCCHHHHHHHHHhchh------------------------HHHHHHhcCCcCHHHHHHHHhhCCCcc
Confidence 632 333322222221 2344 44444444444444333333 356666
Q ss_pred EEEcc--C----CccCCC-----CCcccCCCCCCcEEEccCcccCCCCCCcCcc-cCcCceecccccccCCCcChhh-hc
Q 043136 418 RLRIQ--D----NQLNGS-----IPQGFGLLPNLTFMDMSRNSLSGEIPRDLGN-AQKLEYLNISENSFQTSLPSNI-WS 484 (902)
Q Consensus 418 ~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~ 484 (902)
.|+++ + |.+++. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..
T Consensus 401 ~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~ 479 (594)
T 2p1m_B 401 RFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSG 479 (594)
T ss_dssp EEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHH
T ss_pred eeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhc
Confidence 66666 3 444421 112244566677777755 555444444443 6667777777776654444333 45
Q ss_pred ccccceeccCCCccCCCccc-ccc-cccccEEeccCccccccCCccc-cccccceEEEeeCCcce
Q 043136 485 APNLKILSASSSKLTGKIPD-FIG-CKSIYKIELHNNLLNGSIPWDI-GHCEKLLLLNLSRNSLT 546 (902)
Q Consensus 485 l~~L~~L~ls~N~l~~~~p~-~~~-~~~l~~l~Ls~N~l~g~ip~~~-~~l~~L~~L~Ls~N~l~ 546 (902)
+++|+.|++++|++++.... ... +++|+.|++++|.++..-...+ ..+++|+...+..+.-.
T Consensus 480 ~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 480 CDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp CTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred CCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 67777777777776433222 222 6677777777777643322333 34667777777666543
No 97
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95 E-value=2.1e-28 Score=277.86 Aligned_cols=172 Identities=26% Similarity=0.261 Sum_probs=144.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...++||+|+||+||+|+.. +++.||+|++.+.........+.+.+|+.++..++||||+++++++.+.+..|+|||
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence 3556789999999999999775 478999999854322222223347789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ||||||||+|||++.++.+||+|||+|+....
T Consensus 155 y~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 155 YYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp CCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred cCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 999999999997632 24778888899999999999999776 99999999999999999999999999987654
Q ss_pred CCCc--eeeccccCccccCccc
Q 043136 870 DESM--SVIAGSYGYIAPGTFC 889 (902)
Q Consensus 870 ~~~~--~~~~Gt~~y~APE~~~ 889 (902)
.... ...+||+.|||||++.
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHH
T ss_pred CCCcccccccCCcCeeChHHHh
Confidence 4332 3368999999999996
No 98
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.95 E-value=8.9e-28 Score=265.30 Aligned_cols=172 Identities=23% Similarity=0.289 Sum_probs=148.6
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|+.+++++ +||||+++++++.+.+..|+|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 455689999999999999764 5889999999765444445566788999999887 89999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc-
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ- 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~- 868 (902)
|+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++++||+|||+|+...
T Consensus 91 ~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 91 YVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred CCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999997643 3678888899999999999999776 9999999999999999999999999998643
Q ss_pred CCCCceeeccccCccccCccccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
........+||+.|+|||++.+.
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~ 185 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGE 185 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTC
T ss_pred CCCcccccCCCccccCccccCCC
Confidence 33445667899999999999764
No 99
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5.1e-28 Score=265.82 Aligned_cols=173 Identities=27% Similarity=0.364 Sum_probs=148.8
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|.+ .+++.||+|++.+.........+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 356678999999999999976 5789999999854322222223568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+ +|++.+++...+ .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~-~g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 90 YA-GGELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CC-CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred CC-CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 99 789999887653 3778888999999999999999776 99999999999999999999999999988766
Q ss_pred CCCceeeccccCccccCcccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.......+||+.|+|||++.+..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~ 183 (336)
T 3h4j_B 161 GNFLKTSCGSPNYAAPEVINGKL 183 (336)
T ss_dssp SBTTCCCTTSTTTSCGGGSCCSG
T ss_pred CcccccccCCcCcCCHHHHcCCC
Confidence 66667788999999999997654
No 100
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=260.82 Aligned_cols=173 Identities=27% Similarity=0.462 Sum_probs=146.2
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 456689999999999999764 5899999988543 334566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CTTCBHHHHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 999999999976322 4788899999999999999999776 999999999999999999999999999876432
Q ss_pred CCc---------------eeeccccCccccCcccccccC
Q 043136 871 ESM---------------SVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 871 ~~~---------------~~~~Gt~~y~APE~~~~~~~~ 894 (902)
... ...+||+.|+|||++.+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 200 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD 200 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCC
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCC
Confidence 221 146799999999999775433
No 101
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.95 E-value=7e-28 Score=267.47 Aligned_cols=175 Identities=27% Similarity=0.342 Sum_probs=149.9
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhH---HHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENI---RRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~---~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
..|.+.+.||+|+||.||+|... +++.||+|++.+...... ...+.+.+|++++++++||||+++++++.+.+..|
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 35667789999999999999764 689999999865432211 12456889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----CEEEeec
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM----EARVADF 861 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~----~~kl~DF 861 (902)
+||||++||+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++ .+||+||
T Consensus 92 lv~e~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 92 LILELVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEECCCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999986532 4788889999999999999999776 99999999999998877 7999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++...........+||+.|+|||++.+..
T Consensus 164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 194 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194 (361)
T ss_dssp SSCEECCTTCCCCCCCSCGGGCCHHHHTTCC
T ss_pred CCceEcCCCCccccCCCCccEECchHHcCCC
Confidence 9999887666666778999999999997643
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.95 E-value=2.6e-28 Score=274.98 Aligned_cols=172 Identities=22% Similarity=0.262 Sum_probs=144.8
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...++||+|+||+||+|+.. +++.||+|++.+.........+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 150 (410)
T 3v8s_A 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150 (410)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 456689999999999999765 5889999998543222112233477899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++||+|.++++.. .+++.....++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+|+.....
T Consensus 151 ~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 151 MPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp CTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999998653 2677788899999999999999776 999999999999999999999999999877544
Q ss_pred CC--ceeeccccCccccCcccccc
Q 043136 871 ES--MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~--~~~~~Gt~~y~APE~~~~~~ 892 (902)
.. ..+.+||+.|||||++.+..
T Consensus 222 ~~~~~~~~~gt~~Y~APE~l~~~~ 245 (410)
T 3v8s_A 222 GMVRCDTAVGTPDYISPEVLKSQG 245 (410)
T ss_dssp SEEECCSCCSCGGGCCHHHHHTTT
T ss_pred CcccccCCcCCccccCHHHhhccC
Confidence 32 23578999999999997654
No 103
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.95 E-value=8.6e-28 Score=262.29 Aligned_cols=171 Identities=28% Similarity=0.350 Sum_probs=146.0
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+..|+||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 456689999999999999764 6899999998543322223345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+||+++.+|.+||+|||+++....
T Consensus 88 ~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 88 IEGGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp CCSCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred CCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 99999999997643 3677888899999999999999665 99999999999999999999999999987643
Q ss_pred CCceeeccccCccccCcccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.....+||+.|+|||++.+..
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~ 179 (318)
T 1fot_A 159 -VTYTLCGTPDYIAPEVVSTKP 179 (318)
T ss_dssp -CBCCCCSCTTTCCHHHHTTCC
T ss_pred -ccccccCCccccCHhHhcCCC
Confidence 234568999999999997653
No 104
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=260.27 Aligned_cols=181 Identities=24% Similarity=0.282 Sum_probs=147.3
Q ss_pred HHHHHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecC
Q 043136 704 ADDVLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNR 781 (902)
Q Consensus 704 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~ 781 (902)
.++++...|...++||+|+||+||+|++. +++.||||++....... .......+|+..+.++ +||||+++++++.+.
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~ 129 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP-KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG 129 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccCh-HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC
Confidence 34566778888899999999999999775 68999999985543332 3334455666666555 899999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeec
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADF 861 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 861 (902)
+..|+||||+ +++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCC
T ss_pred CEEEEEEecc-CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccc
Confidence 9999999999 7799998876532 4788999999999999999999776 999999999999999999999999
Q ss_pred ccceeccCCCCceeeccccCccccCccccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
|+++............||+.|+|||++.+.++
T Consensus 202 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 233 (311)
T 3p1a_A 202 GLLVELGTAGAGEVQEGDPRYMAPELLQGSYG 233 (311)
T ss_dssp TTCEECC------CCCCCGGGCCGGGGGTCCS
T ss_pred eeeeecccCCCCcccCCCccccCHhHhcCCCC
Confidence 99988766555566779999999999987543
No 105
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=274.06 Aligned_cols=173 Identities=27% Similarity=0.268 Sum_probs=146.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||+||+|+.. +++.||+|++.+.........+.+.+|++++..++||||+++++++.+.+..|+|||
T Consensus 62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE 141 (412)
T 2vd5_A 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141 (412)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEc
Confidence 3456689999999999999774 689999999854332222233457889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|++||+|.+++...+. .+++..+..++.||+.||+|||+++ ||||||||+|||++.++++||+|||+|+....
T Consensus 142 ~~~gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 142 YYVGGDLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp CCCSCBHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CCCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 9999999999976432 4677888899999999999999776 99999999999999999999999999988755
Q ss_pred CCCc--eeeccccCccccCcccc
Q 043136 870 DESM--SVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 870 ~~~~--~~~~Gt~~y~APE~~~~ 890 (902)
.... ...+||+.|||||++..
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~ 237 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQA 237 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHH
T ss_pred CCccccceeccccCcCCHHHHhh
Confidence 4332 34689999999999973
No 106
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.95 E-value=1.2e-27 Score=258.64 Aligned_cols=176 Identities=26% Similarity=0.345 Sum_probs=146.8
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|.+.+.||+|+||.||+|++ .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4566778999999999999976 468899999986555555566778899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 91 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp ECCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred eCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999997653 3778889999999999999999776 9999999999999999999999999998764
Q ss_pred CCC--CceeeccccCccccCccccccc
Q 043136 869 SDE--SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 869 ~~~--~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
... .....+||+.|+|||++.+...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~ 189 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEAT 189 (294)
T ss_dssp ------------CCSSCCHHHHHTCCC
T ss_pred cccccccCccccCccccCHhHhcCCCC
Confidence 332 2344679999999999977544
No 107
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.95 E-value=9.3e-28 Score=265.60 Aligned_cols=174 Identities=25% Similarity=0.287 Sum_probs=147.1
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|.+++..+ +||+|+++++++.+.+..|+||
T Consensus 21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 100 (353)
T 2i0e_A 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 100 (353)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence 3456689999999999999775 4789999998644322223345678899999988 7999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||++||+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+||+++.+|.+||+|||+|+...
T Consensus 101 E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999997643 3678888899999999999999776 9999999999999999999999999998643
Q ss_pred -CCCCceeeccccCccccCcccccc
Q 043136 869 -SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 -~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|+|||++.+..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~ 197 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQP 197 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred cCCcccccccCCccccChhhhcCCC
Confidence 333456678999999999997643
No 108
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.95 E-value=1e-27 Score=278.61 Aligned_cols=174 Identities=27% Similarity=0.348 Sum_probs=150.0
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|+.. +++.||+|++.+...........+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 455689999999999999764 6899999998544322223345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++||+|.+++..... ..+++..+..++.||+.||+|||+++ ||||||||+||+++.+|.+||+|||+|+.....
T Consensus 266 ~~gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp CCSCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred CCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999875432 23778888999999999999999776 999999999999999999999999999988766
Q ss_pred CCceeeccccCccccCccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~ 891 (902)
......+||+.|+|||++.+.
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~ 360 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNE 360 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTC
T ss_pred ccccccCCCccccCHHHHcCC
Confidence 666677999999999999764
No 109
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.95 E-value=7.4e-28 Score=265.53 Aligned_cols=174 Identities=28% Similarity=0.341 Sum_probs=146.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|.+++..+ +||||+++++++.+.+..|+||
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 3556789999999999999774 5899999998543322222345577899999876 8999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||++||+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+|+...
T Consensus 98 E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 98 EYLNGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp ECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999997643 3677888899999999999999776 9999999999999999999999999998653
Q ss_pred -CCCCceeeccccCccccCcccccc
Q 043136 869 -SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 -~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|+|||++.+..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~ 194 (345)
T 1xjd_A 170 LGDAKTNTFCGTPDYIAPEILLGQK 194 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred cCCCcccCCCCCcccCChhhhcCCC
Confidence 233456678999999999997753
No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95 E-value=1.4e-27 Score=264.20 Aligned_cols=171 Identities=25% Similarity=0.259 Sum_probs=147.0
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 455689999999999999764 6899999998544332223456688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 123 VAGGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp CTTCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999997653 3677888899999999999999776 999999999999999999999999999876433
Q ss_pred CCceeeccccCccccCcccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
....+||+.|+|||++.+..
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~ 214 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKG 214 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCC
T ss_pred --cccccCCccccCHHHhcCCC
Confidence 34568999999999997653
No 111
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=1.6e-27 Score=260.78 Aligned_cols=171 Identities=20% Similarity=0.291 Sum_probs=148.6
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 4566789999999999999764 58899999985332 234567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--CCCEEEeecccceec
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG--EMEARVADFGVAKLI 867 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~--~~~~kl~DFGla~~~ 867 (902)
|+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++. ++.+||+|||+++..
T Consensus 82 ~~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 82 FISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred eCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 999999999986432 24778889999999999999999776 999999999999987 789999999999988
Q ss_pred cCCCCceeeccccCccccCcccccc
Q 043136 868 QSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 868 ~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
..........||+.|+|||++.+..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~ 179 (321)
T 1tki_A 155 KPGDNFRLLFTAPEYYAPEVHQHDV 179 (321)
T ss_dssp CTTCEEEEEESCGGGSCHHHHTTCE
T ss_pred CCCCccccccCChhhcCcHHhcCCC
Confidence 7666667788999999999997754
No 112
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=264.52 Aligned_cols=173 Identities=23% Similarity=0.346 Sum_probs=140.7
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|...+.||+|+||.||+|++ .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3466778999999999999975 57899999998654322 23456789999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+|....
T Consensus 88 E~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp ECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 9999999999997653 3778888999999999999999776 9999999999999999999999999998764
Q ss_pred CCC--CceeeccccCccccCcccccc
Q 043136 869 SDE--SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 ~~~--~~~~~~Gt~~y~APE~~~~~~ 892 (902)
... .....+||+.|+|||++.+..
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~ 185 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKS 185 (347)
T ss_dssp ------------CGGGCCHHHHTTC-
T ss_pred CCCCccccccCCccCccCHHHHcCCC
Confidence 332 245578999999999997653
No 113
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.95 E-value=2e-27 Score=257.19 Aligned_cols=171 Identities=23% Similarity=0.376 Sum_probs=146.9
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|.+ .+++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 466778999999999999975 56899999998543322 23557889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 98 YLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp CCTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 99999999998753 3677888999999999999999776 99999999999999999999999999987754
Q ss_pred CC-CceeeccccCccccCccccccc
Q 043136 870 DE-SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 870 ~~-~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.. .....+||+.|+|||++.+...
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~ 193 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAY 193 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCB
T ss_pred cccccCCccCCcCccChhhhcCCCC
Confidence 33 3445689999999999976543
No 114
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=2.3e-27 Score=263.99 Aligned_cols=177 Identities=25% Similarity=0.337 Sum_probs=151.4
Q ss_pred HHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 707 VLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 707 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.+...|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 34456778899999999999999764 689999999864432 3345567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CCEEEeecc
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE---MEARVADFG 862 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DFG 862 (902)
+||||+++|+|.+++.... .+++..+..++.||++||+|||+++ |+||||||+||+++.+ +.+||+|||
T Consensus 105 lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG 176 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFG 176 (362)
T ss_dssp EEECCCCSCBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecC
Confidence 9999999999999886532 4678889999999999999999776 9999999999999765 459999999
Q ss_pred cceeccCCCCceeeccccCccccCcccccc
Q 043136 863 VAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 863 la~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+++...........+||+.|+|||++.+..
T Consensus 177 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (362)
T 2bdw_A 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206 (362)
T ss_dssp TCBCCTTCCSCCCSCSCTTTCCHHHHTTCC
T ss_pred cceEecCCcccccCCCCccccCHHHHccCC
Confidence 998877665556678999999999997753
No 115
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.95 E-value=1.9e-27 Score=263.65 Aligned_cols=182 Identities=20% Similarity=0.252 Sum_probs=149.3
Q ss_pred HHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhh--HHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe
Q 043136 707 VLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKEN--IRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC 783 (902)
Q Consensus 707 ~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~--~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~ 783 (902)
+++..|.+.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3456788889999999999999976 468999999985322111 0124568899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC---EEEee
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME---ARVAD 860 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~---~kl~D 860 (902)
.|+||||+++|+|.+.+..... ....+++..+..++.||++||+|||+++ |+||||||+||+++.++. +||+|
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEec
Confidence 9999999999999988865432 2234678888899999999999999776 999999999999986654 99999
Q ss_pred cccceeccCCCC-ceeeccccCccccCcccccc
Q 043136 861 FGVAKLIQSDES-MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 861 FGla~~~~~~~~-~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+++....... ....+||+.|+|||++.+..
T Consensus 177 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 209 (351)
T 3c0i_A 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 209 (351)
T ss_dssp CTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCC
T ss_pred CcceeEecCCCeeecCCcCCcCccCHHHHcCCC
Confidence 999988754432 34568999999999997653
No 116
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=260.26 Aligned_cols=176 Identities=26% Similarity=0.354 Sum_probs=150.3
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhH---HHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENI---RRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~---~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~ 784 (902)
...|...+.||+|+||.||+|... +++.||+|++........ ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456778899999999999999764 589999999865432211 1245688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----CEEEee
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM----EARVAD 860 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~----~~kl~D 860 (902)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEcCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999986432 4778889999999999999999776 99999999999999887 799999
Q ss_pred cccceeccCCCCceeeccccCccccCcccccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+++...........+||+.|+|||++.+..
T Consensus 162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 193 (326)
T 2y0a_A 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193 (326)
T ss_dssp CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCC
T ss_pred CCCCeECCCCCccccccCCcCcCCceeecCCC
Confidence 99999876555556678999999999997653
No 117
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.94 E-value=1.3e-27 Score=266.32 Aligned_cols=173 Identities=29% Similarity=0.319 Sum_probs=137.9
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHH-HhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDV-LGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|.+.+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|..+ ++.++||||+++++++.+.+..|+|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 456689999999999999765 588999999966544334445567778877 467899999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc-
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ- 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~- 868 (902)
|++||+|.+++...+ .+++.....++.||+.||+|||+++ |+||||||+||+++.+|++||+|||+++...
T Consensus 120 ~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 120 YINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred CCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999997643 3667778889999999999999776 9999999999999999999999999998643
Q ss_pred CCCCceeeccccCccccCcccccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|+|||++.+..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~ 215 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQP 215 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCC
T ss_pred CCCccccccCCccccCHHHhCCCC
Confidence 333456678999999999997653
No 118
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=266.56 Aligned_cols=173 Identities=15% Similarity=0.183 Sum_probs=143.9
Q ss_pred hccCCcEeeecCceEEEEEE------eCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC---cCeeEeEEeEEecC
Q 043136 711 LSMSDKILGMGSTGTVYKAE------MPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR---HRNIVRLLGCCSNR 781 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~------~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~---h~nIv~l~~~~~~~ 781 (902)
.|...+.||+|+||.||+|. ..+++.||+|++.... ..++.+|++++++++ |+||+++++++...
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45667899999999999993 4568899999985432 224566777777776 99999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---------
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG--------- 852 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~--------- 852 (902)
+..|+||||+++|+|.+++...+......+++..++.|+.||++||+|||+++ ||||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 99999999999999999998755444456889999999999999999999665 999999999999998
Q ss_pred --CCCEEEeecccceeccC---CCCceeeccccCccccCcccccc
Q 043136 853 --EMEARVADFGVAKLIQS---DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 853 --~~~~kl~DFGla~~~~~---~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
++.+||+|||+|+.+.. .......+||+.|||||++.+..
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 261 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP 261 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCC
Confidence 89999999999986542 22334567999999999998764
No 119
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.94 E-value=4.4e-27 Score=258.61 Aligned_cols=176 Identities=23% Similarity=0.328 Sum_probs=143.0
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC-------
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE------- 782 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~------- 782 (902)
.|...+.||+|+||.||+|++. +++.||||++..... ....+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST--TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 4667789999999999999775 789999999864332 234567889999999999999999999885433
Q ss_pred --------------------------------------------------eeEEEEEccCCCCHHHHHHhhccCCCcccC
Q 043136 783 --------------------------------------------------CTMLLYEYMPNGNLDDLLHAKNKGENLVAD 812 (902)
Q Consensus 783 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 812 (902)
..++||||+++|+|.+++..... ....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~ 162 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDRE 162 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSC
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchh
Confidence 37999999999999999986543 22345
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCC-------------Cceeeccc
Q 043136 813 WVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE-------------SMSVIAGS 879 (902)
Q Consensus 813 ~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~-------------~~~~~~Gt 879 (902)
+..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... .....+||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 6677899999999999999776 9999999999999999999999999998875432 12335799
Q ss_pred cCccccCccccccc
Q 043136 880 YGYIAPGTFCFCFS 893 (902)
Q Consensus 880 ~~y~APE~~~~~~~ 893 (902)
+.|+|||++.+...
T Consensus 240 ~~y~aPE~~~~~~~ 253 (332)
T 3qd2_B 240 KLYMSPEQIHGNNY 253 (332)
T ss_dssp GGGSCHHHHHCCCC
T ss_pred cCccChHHhcCCCC
Confidence 99999999976543
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.94 E-value=1.6e-27 Score=273.44 Aligned_cols=174 Identities=28% Similarity=0.439 Sum_probs=150.5
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|++. +++.||||++...........+.+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3556789999999999999765 789999999854332222234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 97 YVSGGELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp CCSSEEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred CCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999986432 3778888999999999999999665 99999999999999999999999999998776
Q ss_pred CCCceeeccccCccccCcccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.......+||+.|+|||++.+..
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~ 191 (476)
T 2y94_A 169 GEFLRTSCGSPNYAAPEVISGRL 191 (476)
T ss_dssp TCCBCCCCSCSTTCCHHHHTTCC
T ss_pred cccccccCCCcCeEChhhccCCC
Confidence 66666788999999999998753
No 121
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.94 E-value=4.5e-27 Score=257.35 Aligned_cols=182 Identities=26% Similarity=0.354 Sum_probs=151.4
Q ss_pred cCCCHHHHHHHh------------ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC
Q 043136 700 LNFTADDVLECL------------SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV 766 (902)
Q Consensus 700 ~~~~~~~~~~~~------------~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l 766 (902)
..++.+++.++. +...+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhC
Confidence 346666666554 334568999999999999875 6999999998543322 245578999999999
Q ss_pred CcCeeEeEEeEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 043136 767 RHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPS 846 (902)
Q Consensus 767 ~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~ 846 (902)
+||||+++++++...+..|+||||+++|+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~ 170 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSD 170 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGG
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHH
Confidence 9999999999999999999999999999999988642 3778899999999999999999766 999999999
Q ss_pred CEEEcCCCCEEEeecccceeccCCC-CceeeccccCccccCccccccc
Q 043136 847 NILLDGEMEARVADFGVAKLIQSDE-SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 847 NILl~~~~~~kl~DFGla~~~~~~~-~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
||+++.++.+||+|||+++...... .....+||+.|+|||++.+...
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 218 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLY 218 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCB
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCC
Confidence 9999999999999999998775432 3455689999999999976543
No 122
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=267.44 Aligned_cols=176 Identities=23% Similarity=0.290 Sum_probs=148.1
Q ss_pred HHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
+...|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 345677789999999999999965 5689999999865433 33455678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc---CCCCEEEeeccc
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD---GEMEARVADFGV 863 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~---~~~~~kl~DFGl 863 (902)
||||+++|+|.+.+.... .+++.....++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 999999999999987643 3778888999999999999999776 99999999999998 467899999999
Q ss_pred ceeccCCCC-ceeeccccCccccCcccccc
Q 043136 864 AKLIQSDES-MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 864 a~~~~~~~~-~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+....... ....+||+.|+|||++.+..
T Consensus 160 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 189 (444)
T 3soa_A 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189 (444)
T ss_dssp CBCCCTTCCBCCCSCSCGGGCCHHHHTTCC
T ss_pred eEEecCCCceeecccCCcccCCHHHhcCCC
Confidence 987754332 34578999999999997753
No 123
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.94 E-value=2.8e-27 Score=264.18 Aligned_cols=177 Identities=25% Similarity=0.377 Sum_probs=146.8
Q ss_pred hccCCcEeeecCceEEEEEEeC--------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecC
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP--------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNR 781 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~ 781 (902)
.|.+.+.||+|+||.||+|++. ++..||||++.... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 4566789999999999999752 35679999985442 334566789999999999 899999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccC-----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKG-----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL 850 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl 850 (902)
+..|+||||+++|+|.+++...... ....+++..++.++.||++||+|||+++ |+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 9999999999999999999865421 1234788889999999999999999776 9999999999999
Q ss_pred cCCCCEEEeecccceeccCCCC---ceeeccccCccccCcccccc
Q 043136 851 DGEMEARVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 851 ~~~~~~kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~ 892 (902)
+.++.+||+|||+|+....... .....||+.|+|||++.+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 281 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 281 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCC
Confidence 9999999999999987654322 23345788999999987654
No 124
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.94 E-value=4.2e-27 Score=272.95 Aligned_cols=176 Identities=26% Similarity=0.384 Sum_probs=148.7
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...++||+|+||.||+|+.. +++.||+|++.+.........+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 344578999999999999774 6899999998544332223345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++||+|.+++..... ....+++.....++.||+.||+|||+++ |+||||||+||+++.+|.+||+|||+++.+...
T Consensus 267 ~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp CTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 999999999875432 2335788888899999999999999776 999999999999999999999999999987554
Q ss_pred CC-ceeeccccCccccCccccc
Q 043136 871 ES-MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~-~~~~~Gt~~y~APE~~~~~ 891 (902)
.. ....+||+.|||||++.+.
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~ 364 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGE 364 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTC
T ss_pred CcccccccCCccccChhhhcCC
Confidence 33 3446899999999999775
No 125
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.94 E-value=4.7e-27 Score=257.93 Aligned_cols=174 Identities=26% Similarity=0.328 Sum_probs=136.7
Q ss_pred hccCCcEeeecCceEEEEEEe----CCCcEEEEEEecccchh-hHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM----PGGEIIAVKKLWGKHKE-NIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~i~~~~~~-~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.|...+.||+|+||.||+|+. .+++.||+|++.+.... .......+.+|++++++++||||+++++++.+.+..|
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 466778999999999999976 47899999998654321 2233456778999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEeCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999997643 3667788899999999999999776 9999999999999999999999999998
Q ss_pred eccC-CCCceeeccccCccccCcccccc
Q 043136 866 LIQS-DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~-~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.... .......+||+.|+|||++.+..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 197 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSG 197 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCC
Confidence 6532 22334567999999999987653
No 126
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.94 E-value=5.9e-27 Score=255.25 Aligned_cols=171 Identities=26% Similarity=0.404 Sum_probs=142.1
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|...+.||+|+||.||+|++.+++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 456678999999999999998889999999985432 2223346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++ |++.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+|+.....
T Consensus 101 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 101 ME-KDLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CS-EEHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CC-CCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 97 58888886543 23677888999999999999999776 999999999999999999999999999876533
Q ss_pred -CCceeeccccCccccCcccc
Q 043136 871 -ESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 871 -~~~~~~~Gt~~y~APE~~~~ 890 (902)
.......||+.|+|||++.+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~ 193 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMG 193 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTT
T ss_pred cccccCCcccCCcCCHHHhcC
Confidence 23345679999999999865
No 127
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.94 E-value=7.7e-27 Score=261.46 Aligned_cols=172 Identities=21% Similarity=0.316 Sum_probs=147.9
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 4666789999999999999764 688999999854332 234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--CCCEEEeecccceec
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG--EMEARVADFGVAKLI 867 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~--~~~~kl~DFGla~~~ 867 (902)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+|+..
T Consensus 129 ~~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 129 FLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp CCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceec
Confidence 999999999886432 24788889999999999999999776 999999999999974 478999999999988
Q ss_pred cCCCCceeeccccCccccCcccccc
Q 043136 868 QSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 868 ~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.........+||+.|+|||++.+..
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~ 226 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREP 226 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCC
T ss_pred CCCcceeeeccCCCccCchhccCCC
Confidence 7666666778999999999997653
No 128
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.6e-26 Score=245.71 Aligned_cols=217 Identities=22% Similarity=0.232 Sum_probs=133.0
Q ss_pred ccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhc
Q 043136 93 PIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQ 172 (902)
Q Consensus 93 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 172 (902)
.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3555443 57888888888888777777888888888888888877665556666666666666666666555555555
Q ss_pred ccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEE
Q 043136 173 LNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMD 252 (902)
Q Consensus 173 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 252 (902)
+++|++|++++|.+.+..+..++++++|++|+|++|++++. .+|..|..+++|++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------------~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-----------------------KLPEYFSNLTNLEHLD 155 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----------------------CCCGGGGGCTTCCEEE
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee-----------------------cCchhhccCCCCCEEE
Confidence 55555555555555544444455555555555555555432 1344555555555555
Q ss_pred ccCccCcccCCccccCCCCcc----EEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCc
Q 043136 253 ISACNLSGTLPSEISNLTKLE----MLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNN 328 (902)
Q Consensus 253 Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 328 (902)
|++|++++..+..+..+++|+ +|++++|++++..+..+.. .+|++|+|++|++++..+..|..+++|+.|++++|
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 555555544444454444444 5666666666544444433 36777777777776655556666777777777777
Q ss_pred cccccCC
Q 043136 329 VLFGEIP 335 (902)
Q Consensus 329 ~l~~~~p 335 (902)
.+.+..|
T Consensus 235 ~~~c~c~ 241 (276)
T 2z62_A 235 PWDCSCP 241 (276)
T ss_dssp CBCCCTT
T ss_pred cccccCC
Confidence 7765543
No 129
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.94 E-value=5.9e-27 Score=256.94 Aligned_cols=174 Identities=29% Similarity=0.483 Sum_probs=143.1
Q ss_pred HhccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
..|.+.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 45667789999999999999774 35569999985432 2345567899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.++++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999965422 4778889999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC----ceeeccccCccccCcccccc
Q 043136 866 LIQSDES----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~----~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....||+.|+|||++.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 230 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCE
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCC
Confidence 7754322 12234678899999987543
No 130
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.94 E-value=2.9e-27 Score=257.84 Aligned_cols=175 Identities=22% Similarity=0.295 Sum_probs=141.1
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe----e
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC----T 784 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~----~ 784 (902)
..|.+.+.||+|+||.||+|++ .+++.||||++.............+.+|++++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4566778999999999999976 5789999999976554555566778999999999999999999999876543 4
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||+++++|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred EEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999997643 3678888999999999999999776 999999999999999999999999999
Q ss_pred eeccCCC----CceeeccccCccccCcccccc
Q 043136 865 KLIQSDE----SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 865 ~~~~~~~----~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+.+.... .....+||+.|+|||++.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 195 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195 (311)
T ss_dssp ------------------CCTTCCHHHHHTCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCC
Confidence 8764332 223457999999999997654
No 131
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.94 E-value=4e-27 Score=256.21 Aligned_cols=179 Identities=34% Similarity=0.463 Sum_probs=139.6
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|.+.+.||+|+||.||+|+. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred HceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 456678999999999999987 678899999865432 334456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999999975431 123778888999999999999999542 23999999999999999999999999999865433
Q ss_pred C-CceeeccccCccccCcccccccC
Q 043136 871 E-SMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 871 ~-~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
. ......||+.|+|||++.+....
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~ 217 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSN 217 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCC
T ss_pred ccccccCCCCccccChhhhcCCCCC
Confidence 2 23456899999999999776443
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.94 E-value=1.2e-26 Score=248.38 Aligned_cols=174 Identities=24% Similarity=0.308 Sum_probs=150.5
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
...|...+.||+|+||.||+|... ++..||+|++...... ..+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 456778899999999999999764 4778999998543322 245678999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVA 864 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla 864 (902)
|||+++++|.+++.... .+++..+..++.|++.|++|||+++ |+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 99999999999887643 3678889999999999999999776 9999999999999 78899999999999
Q ss_pred eeccCCCCceeeccccCccccCccccccc
Q 043136 865 KLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 865 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+............||+.|+|||++.+.++
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 185 (277)
T 3f3z_A 157 ARFKPGKMMRTKVGTPYYVSPQVLEGLYG 185 (277)
T ss_dssp EECCTTSCBCCCCSCTTTCCHHHHTTCBC
T ss_pred eeccCccchhccCCCCCccChHHhcccCC
Confidence 98776666667789999999999876533
No 133
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.94 E-value=2e-27 Score=260.89 Aligned_cols=184 Identities=38% Similarity=0.659 Sum_probs=150.9
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
++....|...+.||+|+||.||+|+..+++.||||++...... .....+.+|++++++++||||+++++++.+.+..+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 103 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 103 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred HHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence 3334456778999999999999998888999999998543221 12235789999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++..... ....+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||+++
T Consensus 104 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 104 LVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999999976543 33457889999999999999999998733359999999999999999999999999998
Q ss_pred eccCCCC--ceeeccccCccccCcccccc
Q 043136 866 LIQSDES--MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~--~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....||+.|+|||++.+..
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 211 (326)
T 3uim_A 183 LMDYKDTHVTTAVRGTIGHIAPEYLSTGK 211 (326)
T ss_dssp ECCSSSSCEECCCCSCGGGCCHHHHHHSE
T ss_pred ccCcccccccccccCCcCccCHHHhccCC
Confidence 7653322 33456999999999986543
No 134
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.94 E-value=2.6e-27 Score=271.53 Aligned_cols=174 Identities=25% Similarity=0.258 Sum_probs=137.2
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+. .+++.||||++.+...........+.+|+++++.++||||+++++++.+.+..|+|||
T Consensus 149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence 356678999999999999976 4689999999864433333445667889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHH-DCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+|+...
T Consensus 229 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 229 YANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp CCSSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred eCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 999999999987643 36788889999999999999997 55 9999999999999999999999999998643
Q ss_pred -CCCCceeeccccCccccCcccccc
Q 043136 869 -SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 -~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|||||++.+..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~ 325 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDND 325 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSC
T ss_pred CCCcccccccCCccccCHhhcCCCC
Confidence 233345678999999999997653
No 135
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.94 E-value=9.8e-27 Score=259.83 Aligned_cols=168 Identities=27% Similarity=0.432 Sum_probs=140.3
Q ss_pred CcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEccCC
Q 043136 715 DKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 46799999999999976 4689999999864432 3456788999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE--cCCCCEEEeecccceeccCCC
Q 043136 794 GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL--DGEMEARVADFGVAKLIQSDE 871 (902)
Q Consensus 794 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl--~~~~~~kl~DFGla~~~~~~~ 871 (902)
|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++......
T Consensus 171 ~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 171 GELFDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CEEHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 99999886543 24778888999999999999999776 9999999999999 567899999999999887666
Q ss_pred CceeeccccCccccCcccccc
Q 043136 872 SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 872 ~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.....+||+.|+|||++.+..
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~ 264 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDF 264 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCB
T ss_pred ccccccCCCcEeChhhccCCC
Confidence 566678999999999987654
No 136
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.94 E-value=8.3e-27 Score=255.41 Aligned_cols=174 Identities=33% Similarity=0.582 Sum_probs=147.2
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
|...+.||+|+||.||+|++.+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS---SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccCh---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 456688999999999999988899999999864432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC-
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD- 870 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~- 870 (902)
++|+|.+++..... ....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 193 (321)
T 2qkw_B 118 ENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELD 193 (321)
T ss_dssp TTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred CCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999998865432 2335788999999999999999999766 999999999999999999999999999875422
Q ss_pred --CCceeeccccCccccCcccccc
Q 043136 871 --ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 --~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.......||+.|+|||++.+..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~ 217 (321)
T 2qkw_B 194 QTHLSTVVKGTLGYIDPEYFIKGR 217 (321)
T ss_dssp CCCCBCCCEEETTTCCHHHHHHCB
T ss_pred ccccccccCCCccccCHHHhcCCC
Confidence 1233456999999999986543
No 137
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.9e-29 Score=299.18 Aligned_cols=392 Identities=15% Similarity=0.122 Sum_probs=261.7
Q ss_pred CCEEEEEcCCCCcccc---cC------------ccccCCCCCCEEEccCCCCcccCchhhh-ccCCCcEEEccCC-CCCC
Q 043136 78 SQITSLDLSRRSLSGP---IP------------PEIRYLTSLTHLNLSANAFDGPLQPAIL-ELTKLRTIDISHN-SFNS 140 (902)
Q Consensus 78 ~~v~~L~L~~~~l~g~---~~------------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N-~l~~ 140 (902)
.+++.|+|+++..... .| .....+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.
T Consensus 66 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 145 (594)
T 2p1m_B 66 PKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFST 145 (594)
T ss_dssp TTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEH
T ss_pred CCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH
Confidence 3688999988653221 11 2235688999999999999988777776 7999999999999 5554
Q ss_pred C-CCcccccccccceeccccccccCCCchhhh----cccCCcEEeccCcc--CcCC-CCcccCCCCCCCEEEccCC-Ccc
Q 043136 141 T-FPPGISKLRFLRIFNAYSNSFTGPLPLEFV----QLNSLQQLNLGGSY--FDGE-IPSDYRNLSSLRFLDLAGN-SLT 211 (902)
Q Consensus 141 ~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~L~~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~ 211 (902)
. ++..+.++++|++|+|++|.+++..+..+. .+++|++|+|++|. ++.. ++..+.++++|++|+|++| .++
T Consensus 146 ~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~ 225 (594)
T 2p1m_B 146 DGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE 225 (594)
T ss_dssp HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH
T ss_pred HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH
Confidence 3 444456899999999999999887666555 56699999999987 2211 1122345799999999999 555
Q ss_pred CCCCccccCCCCCcEEEee-------CcccCCCCChhccCCCCCCEE-EccCccCcccCCccccCCCCccEEecCCCccc
Q 043136 212 GSLPPQLGLLTQLERIEIG-------YNNLQGEVPVEFASLVNLKYM-DISACNLSGTLPSEISNLTKLEMLLLFKNHFT 283 (902)
Q Consensus 212 ~~~p~~~~~l~~L~~L~L~-------~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 283 (902)
+ +|..+..+++|++|+++ .|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|+|++|.++
T Consensus 226 ~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~ 302 (594)
T 2p1m_B 226 K-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQ 302 (594)
T ss_dssp H-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCC
T ss_pred H-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCC
Confidence 4 78888899999999954 445554 44578999999999 4544433 345666668899999999999987
Q ss_pred eecCC-CCCCcCcCcEEecccCCCccc-cCccccccCCCCEEEcc---------CccccccCChhhh-hccccceEEecC
Q 043136 284 GEIPV-SYGNLQALQVLDLSDNQLSGP-IPASLASLKGLTRLSLM---------NNVLFGEIPQDIE-LLADLDTLLLWN 351 (902)
Q Consensus 284 ~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~ 351 (902)
+.... .+..+++|++|++++| ++.. ++.....+++|++|+++ .+.+++.....+. .+++|+.|.++.
T Consensus 303 ~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~ 381 (594)
T 2p1m_B 303 SYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFC 381 (594)
T ss_dssp HHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhc
Confidence 54322 3567899999999998 5432 33334468999999993 4566554444443 488999999999
Q ss_pred ceeccccCcccc-CCCceeEEEec--C----CcccCCCC-----CCccCCCCccEEeccCCcCcccccccccc-cCCCcE
Q 043136 352 NHLTGVLPQKLG-SNGKLLTVDVS--S----NSLTGPIP-----PTICDGDRLFKLILFSNNFTYSIPENLVN-CSSLSR 418 (902)
Q Consensus 352 N~l~~~~~~~~~-~~~~L~~L~Ls--~----N~l~~~~p-----~~~~~~~~L~~L~l~~N~l~~~~p~~l~~-l~~L~~ 418 (902)
|++++.....+. .+++|+.|+++ + |++++... ..+..+++|+.|++++ ++++..+..+.. +++|+.
T Consensus 382 ~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~ 460 (594)
T 2p1m_B 382 RQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEM 460 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCE
T ss_pred CCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccE
Confidence 999877666665 57899999999 3 44542111 1133344555555544 444433333333 455555
Q ss_pred EEccCCccCCCCCccc-CCCCCCcEEEccCcccCCCCCC-cCcccCcCceeccccccc
Q 043136 419 LRIQDNQLNGSIPQGF-GLLPNLTFMDMSRNSLSGEIPR-DLGNAQKLEYLNISENSF 474 (902)
Q Consensus 419 L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l 474 (902)
|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|++|++++|++
T Consensus 461 L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 461 LSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp EEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred eeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 5555555543333222 3355555555555555332222 223345555555555554
No 138
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.94 E-value=9.8e-27 Score=254.89 Aligned_cols=170 Identities=31% Similarity=0.458 Sum_probs=140.3
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC----eeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE----CTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~----~~~l 786 (902)
.|...+.||+|+||.||+|+.. ++.||||++.... .......+|+.++++++||||+++++++.... ..|+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3456689999999999999874 7899999985332 22344566999999999999999999997743 4699
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEEcCCCCCCEEEcCCCCEEEe
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-------CDPVIVHRDLKPSNILLDGEMEARVA 859 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-------~~~~ivHrDlKp~NILl~~~~~~kl~ 859 (902)
||||+++|+|.++++.. .+++..++.++.|+++||+|||+. +..+|+||||||+||+++.++.+||+
T Consensus 100 v~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 99999999999999653 378889999999999999999965 01159999999999999999999999
Q ss_pred ecccceeccCCCC---ceeeccccCccccCccccc
Q 043136 860 DFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 860 DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 891 (902)
|||+|+....... ....+||+.|+|||++.+.
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 208 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTC
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccc
Confidence 9999987654332 2335799999999999764
No 139
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=1.1e-26 Score=257.14 Aligned_cols=170 Identities=30% Similarity=0.473 Sum_probs=145.8
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|...+.||+|+||.||+|+. .+++.||||++...........+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3466678899999999999976 578999999986554444455677899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+. |++.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9996 688888865432 4778889999999999999999776 9999999999999999999999999998764
Q ss_pred CCCCceeeccccCccccCcccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
.. ...+||+.|+|||++.+
T Consensus 206 ~~---~~~~gt~~y~aPE~~~~ 224 (348)
T 1u5q_A 206 PA---NSFVGTPYWMAPEVILA 224 (348)
T ss_dssp SB---CCCCSCGGGCCHHHHHT
T ss_pred CC---CcccCCcceeCHhhhcc
Confidence 32 34679999999999864
No 140
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=5.1e-28 Score=266.85 Aligned_cols=169 Identities=14% Similarity=0.145 Sum_probs=135.0
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchh-----hHHHHHHHHHHHHHHhcCC---------cCeeEeEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKE-----NIRRRRGVLAEVDVLGNVR---------HRNIVRLL 775 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~---------h~nIv~l~ 775 (902)
..|...+.||+|+||+||+|++ +++.||||++...... .....+.+.+|++++++++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4566789999999999999987 7899999999654321 1122345677888877775 77777776
Q ss_pred eEEe-----------------c-------------CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHH
Q 043136 776 GCCS-----------------N-------------RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQ 825 (902)
Q Consensus 776 ~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~ 825 (902)
+++. + .+..|+||||+++|++.+.+.. ..+++..+..++.||+.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHH
Confidence 6542 2 6789999999999976666533 13678889999999999
Q ss_pred HHHHHH-hCCCCCeEEcCCCCCCEEEcCCC--------------------CEEEeecccceeccCCCCceeeccccCccc
Q 043136 826 GICYLH-HDCDPVIVHRDLKPSNILLDGEM--------------------EARVADFGVAKLIQSDESMSVIAGSYGYIA 884 (902)
Q Consensus 826 ~L~~LH-~~~~~~ivHrDlKp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~Gt~~y~A 884 (902)
||+||| +++ ||||||||+|||++.++ .+||+|||+|+..... ..+||+.|||
T Consensus 173 aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~a 245 (336)
T 2vuw_A 173 SLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTC
T ss_pred HHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccC
Confidence 999999 777 99999999999999887 8999999999976543 4589999999
Q ss_pred cCcccccc
Q 043136 885 PGTFCFCF 892 (902)
Q Consensus 885 PE~~~~~~ 892 (902)
||++.+..
T Consensus 246 PE~~~g~~ 253 (336)
T 2vuw_A 246 EDLFTGDG 253 (336)
T ss_dssp SGGGCCCS
T ss_pred hhhhcCCC
Confidence 99998764
No 141
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=252.89 Aligned_cols=173 Identities=27% Similarity=0.450 Sum_probs=146.9
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC--eeEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE--CTML 786 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~--~~~l 786 (902)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++.... ..|+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 34667789999999999999765 4899999998643322 22455778999999999999999999998655 7899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCCEEEeecc
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL----DGEMEARVADFG 862 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl----~~~~~~kl~DFG 862 (902)
||||+++|+|.+++...... ..+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999865432 23788889999999999999999776 9999999999999 778889999999
Q ss_pred cceeccCCCCceeeccccCccccCccc
Q 043136 863 VAKLIQSDESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 863 la~~~~~~~~~~~~~Gt~~y~APE~~~ 889 (902)
+|+...........+||+.|+|||++.
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~ 188 (319)
T 4euu_A 162 AARELEDDEQFVSLYGTEEYLHPDMYE 188 (319)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred CceecCCCCceeecccCCCccCHHHhh
Confidence 999887666666778999999999986
No 142
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6.2e-26 Score=242.74 Aligned_cols=207 Identities=24% Similarity=0.227 Sum_probs=166.9
Q ss_pred cceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeC
Q 043136 152 LRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGY 231 (902)
Q Consensus 152 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 231 (902)
|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 44444444444444444566666667777777777666666777778888888888888777777788888888888888
Q ss_pred cccCCCCChhccCCCCCCEEEccCccCccc-CCccccCCCCccEEecCCCccceecCCCCCCcCcCc----EEecccCCC
Q 043136 232 NNLQGEVPVEFASLVNLKYMDISACNLSGT-LPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQ----VLDLSDNQL 306 (902)
Q Consensus 232 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l 306 (902)
|++++..+..+..+++|++|++++|++++. +|..|.++++|++|+|++|++++..+..+..+++|+ .|++++|++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 888877777899999999999999999874 689999999999999999999988888888887777 899999999
Q ss_pred ccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceeccccC
Q 043136 307 SGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTGVLP 359 (902)
Q Consensus 307 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 359 (902)
++..+..+.. .+|++|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 190 ~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 190 NFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9766665554 589999999999998777778999999999999999986543
No 143
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.94 E-value=6.2e-27 Score=256.45 Aligned_cols=171 Identities=26% Similarity=0.340 Sum_probs=142.8
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|.+. +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 3556789999999999999765 7899999998543322 234567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 86 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp CCTTEEGGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred cCCCCcHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 999999999886432 3778889999999999999999776 99999999999999999999999999987643
Q ss_pred CC---CceeeccccCccccCccccc
Q 043136 870 DE---SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 870 ~~---~~~~~~Gt~~y~APE~~~~~ 891 (902)
.. .....+||+.|+|||++.+.
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~ 182 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRR 182 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCS
T ss_pred CCcccccCCCccCcCccCcHHhccC
Confidence 22 23456899999999999764
No 144
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=5e-27 Score=272.36 Aligned_cols=179 Identities=28% Similarity=0.429 Sum_probs=153.6
Q ss_pred HHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 707 VLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 707 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
++...|...+.||+|+||.||+|+.. +++.||||++.+.........+.+.+|++++++++||||+++++++.+.+..|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 44567888899999999999999765 68999999986543322234566889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecc
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFG 862 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFG 862 (902)
+||||+.+|+|.+.+.... .+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||
T Consensus 103 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 174 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFG 174 (484)
T ss_dssp EEECCCCSCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred EEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence 9999999999999887543 3778888999999999999999776 9999999999999 567899999999
Q ss_pred cceeccCCCCceeeccccCccccCccccccc
Q 043136 863 VAKLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 863 la~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+|+.+.........+||+.|+|||++.+.+.
T Consensus 175 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 205 (484)
T 3nyv_A 175 LSTHFEASKKMKDKIGTAYYIAPEVLHGTYD 205 (484)
T ss_dssp HHHHBCCCCSHHHHTTGGGTCCHHHHHTCCC
T ss_pred eeEEcccccccccCCCCccccCceeecCCCC
Confidence 9988776666667789999999999977543
No 145
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94 E-value=8.5e-27 Score=250.73 Aligned_cols=176 Identities=25% Similarity=0.367 Sum_probs=142.0
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|.+.+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 4577789999999999999976 46889999998544322 23456889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccce
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVAK 865 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla~ 865 (902)
||+++|+|.+++..... ....+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 100 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999865432 1224778889999999999999999776 9999999999999 456789999999998
Q ss_pred eccCCCCceeeccccCccccCccccc
Q 043136 866 LIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 866 ~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
............||+.|+|||++.+.
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~~~ 201 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFKRD 201 (285)
T ss_dssp C----------CTTGGGCCHHHHTTC
T ss_pred ecCCcccCcCcccccCcCChHHhccC
Confidence 87665556667899999999998654
No 146
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.94 E-value=5.5e-27 Score=260.89 Aligned_cols=170 Identities=25% Similarity=0.252 Sum_probs=135.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++...... .+.+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 4667789999999999999775 6899999998543322 2446789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC--EEEeecccceec
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME--ARVADFGVAKLI 867 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~--~kl~DFGla~~~ 867 (902)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+|+..
T Consensus 97 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 97 YASGGELYERICNAG-----RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred eCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 999999999987643 3778888999999999999999776 999999999999987765 999999999865
Q ss_pred cCCCCceeeccccCccccCcccccc
Q 043136 868 QSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 868 ~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.........+||+.|+|||++.+..
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~ 193 (361)
T 3uc3_A 169 VLHSQPKSTVGTPAYIAPEVLLRQE 193 (361)
T ss_dssp ------------CTTSCHHHHHCSS
T ss_pred cccCCCCCCcCCCCcCChhhhcCCC
Confidence 5444455678999999999986643
No 147
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.94 E-value=5.6e-27 Score=249.66 Aligned_cols=171 Identities=24% Similarity=0.374 Sum_probs=145.4
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
..|...+.||+|+||.||+|+..++..||+|++...... .+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 345667899999999999999888889999998543322 2457889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++..... .+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||.++....
T Consensus 84 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGK----GLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999976532 4778889999999999999999776 99999999999999999999999999987654
Q ss_pred CCCc--eeeccccCccccCccccc
Q 043136 870 DESM--SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 870 ~~~~--~~~~Gt~~y~APE~~~~~ 891 (902)
.... ....||+.|+|||++.+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~ 180 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYF 180 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHS
T ss_pred hhhhcccCCCcCcccCCHHHHhcc
Confidence 3322 224467789999998654
No 148
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.94 E-value=8e-27 Score=252.67 Aligned_cols=173 Identities=24% Similarity=0.339 Sum_probs=139.6
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhh-----------------------HHHHHHHHHHHHHHhcC
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKEN-----------------------IRRRRGVLAEVDVLGNV 766 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~-----------------------~~~~~~~~~Ei~il~~l 766 (902)
.|...+.||+|+||.||+|+. .+++.||||++....... ....+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 355678999999999999976 468899999986443211 11235688999999999
Q ss_pred CcCeeEeEEeEEec--CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 043136 767 RHRNIVRLLGCCSN--RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLK 844 (902)
Q Consensus 767 ~h~nIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlK 844 (902)
+||||+++++++.+ .+..|+||||+++++|.+++.. ..+++..+..++.|+++||+|||+++ |+|||||
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk 164 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIK 164 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCC
Confidence 99999999999986 5688999999999999875432 24788889999999999999999776 9999999
Q ss_pred CCCEEEcCCCCEEEeecccceeccCCCC-ceeeccccCccccCcccccc
Q 043136 845 PSNILLDGEMEARVADFGVAKLIQSDES-MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 845 p~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+||+++.++.+||+|||+++....... .....||+.|+|||++.+..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 213 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR 213 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTC
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCC
Confidence 9999999999999999999987754332 34567999999999997654
No 149
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.94 E-value=6.9e-27 Score=251.85 Aligned_cols=171 Identities=29% Similarity=0.431 Sum_probs=140.1
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
|...+.||+|+||.||+|+..+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|+||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence 4566899999999999998888999999998644322 222355778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC-
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD- 870 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~- 870 (902)
++ +|.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 83 DQ-DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp SE-EHHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred CC-CHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 65 99998875322 3677888899999999999999776 999999999999999999999999999876432
Q ss_pred CCceeeccccCccccCccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.......||+.|+|||++.+.
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~ 175 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGS 175 (288)
T ss_dssp -------CCCTTCCHHHHTTC
T ss_pred cccccccccccccCchheeCC
Confidence 223456799999999998653
No 150
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94 E-value=2.2e-26 Score=252.01 Aligned_cols=176 Identities=27% Similarity=0.352 Sum_probs=150.6
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhH---HHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENI---RRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~---~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~ 784 (902)
...|.+.+.||+|+||.||+|+.. +++.||+|++........ ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456778899999999999999764 689999999865432211 1245688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----CEEEee
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM----EARVAD 860 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~----~~kl~D 860 (902)
|+||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999997532 4778889999999999999999776 99999999999999888 799999
Q ss_pred cccceeccCCCCceeeccccCccccCcccccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+++............||+.|+|||++.+..
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 194 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP 194 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCC
T ss_pred CccceecCccccccccCCCCCccCcccccCCC
Confidence 99999876665556678999999999997654
No 151
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94 E-value=5.2e-26 Score=245.74 Aligned_cols=174 Identities=22% Similarity=0.350 Sum_probs=149.5
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence 4566789999999999999775 578899999865544444566778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++.... .+++..+..++.|+++|++|||+++ |+||||||+||+++.++.+||+|||.++....
T Consensus 96 ~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 96 LCRRRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp CCTTCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 999999999887543 3678889999999999999999776 99999999999999999999999999987653
Q ss_pred C-CCceeeccccCccccCcccccc
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. .......||+.|+|||++.+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~ 191 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKG 191 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSC
T ss_pred CccccccccCCCCcCCcchhccCC
Confidence 2 3344567999999999987653
No 152
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=1e-26 Score=259.83 Aligned_cols=174 Identities=28% Similarity=0.456 Sum_probs=135.6
Q ss_pred HhccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
..+...+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 34567799999999999999764 57789999985432 3345667899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.++++... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 9999999999999997542 24778889999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC----ceeeccccCccccCcccccc
Q 043136 866 LIQSDES----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~----~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....+|+.|+|||++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 226 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226 (373)
T ss_dssp ------------------CTTSCHHHHHHCC
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCC
Confidence 7654321 12234577899999987643
No 153
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=1.5e-26 Score=247.38 Aligned_cols=172 Identities=26% Similarity=0.378 Sum_probs=125.8
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|.+.+.||+|+||.||+|++ .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 55678999999999999975 46899999998655444444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+ ++++.+.+.... .+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~-~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 95 A-GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp C-CEEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred c-CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 9 778888886542 3778889999999999999999776 999999999999999999999999999877665
Q ss_pred CCceeeccccCccccCcccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
......+||+.|+|||++.+..
T Consensus 166 ~~~~~~~~t~~y~aPE~~~~~~ 187 (275)
T 2eue_A 166 NFLKTSCGSPNYAAPEVISGKL 187 (275)
T ss_dssp ---------CTTCCHHHHCC--
T ss_pred ccccCCCCCcCcCCceeeeCCC
Confidence 5556678999999999997653
No 154
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.93 E-value=4.2e-26 Score=251.34 Aligned_cols=174 Identities=22% Similarity=0.350 Sum_probs=149.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|++. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 3556689999999999999765 578999999865544444566778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 122 ~~~~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 122 LCRRRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp CCTTCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred cCCCCCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 999999999887543 3678889999999999999999776 99999999999999999999999999987653
Q ss_pred C-CCceeeccccCccccCcccccc
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. .......||+.|+|||++.+..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~ 217 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKG 217 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSC
T ss_pred CcccccccCCCccccCHHHhccCC
Confidence 2 3345567999999999987653
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.93 E-value=7.4e-27 Score=257.12 Aligned_cols=176 Identities=23% Similarity=0.284 Sum_probs=149.6
Q ss_pred HHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhH-----HHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENI-----RRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE 782 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~-----~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~ 782 (902)
...|...+.||+|+||.||+|.+ .+++.||||++........ ...+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 35677789999999999999975 5688999999864422110 12234667999999999999999999999999
Q ss_pred eeEEEEEccCCC-CHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeec
Q 043136 783 CTMLLYEYMPNG-NLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADF 861 (902)
Q Consensus 783 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 861 (902)
..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeec
Confidence 999999999776 9999987543 3778888999999999999999776 999999999999999999999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++...........+||+.|+|||++.+..
T Consensus 175 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 205 (335)
T 3dls_A 175 GSAAYLERGKLFYTFCGTIEYCAPEVLMGNP 205 (335)
T ss_dssp TTCEECCTTCCBCEECSCGGGCCHHHHTTCC
T ss_pred ccceECCCCCceeccCCCccccChhhhcCCC
Confidence 9999887766667788999999999997654
No 156
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.93 E-value=5.2e-26 Score=247.35 Aligned_cols=186 Identities=34% Similarity=0.523 Sum_probs=154.9
Q ss_pred cCCCHHHHHHHhccCC--------cEeeecCceEEEEEEeCCCcEEEEEEecccch-hhHHHHHHHHHHHHHHhcCCcCe
Q 043136 700 LNFTADDVLECLSMSD--------KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHK-ENIRRRRGVLAEVDVLGNVRHRN 770 (902)
Q Consensus 700 ~~~~~~~~~~~~~~~~--------~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~-~~~~~~~~~~~Ei~il~~l~h~n 770 (902)
..|+.+++.+....++ +.||+|+||.||+|.. +++.||+|++..... ......+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4578888887765443 6799999999999987 678999999864322 12234567889999999999999
Q ss_pred eEeEEeEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043136 771 IVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL 850 (902)
Q Consensus 771 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl 850 (902)
|+++++++.+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+++ |+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999975433 235788899999999999999999776 9999999999999
Q ss_pred cCCCCEEEeecccceeccCCCC---ceeeccccCccccCccccc
Q 043136 851 DGEMEARVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 851 ~~~~~~kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 891 (902)
+.++.+||+|||+++....... .....||+.|+|||++.+.
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~ 210 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE 210 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC
Confidence 9999999999999987654322 2335799999999998764
No 157
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.93 E-value=3.2e-26 Score=257.79 Aligned_cols=174 Identities=19% Similarity=0.167 Sum_probs=146.9
Q ss_pred hccCCcEeeec--CceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 711 LSMSDKILGMG--STGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 711 ~~~~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
.|.+.+.||+| +||.||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 45667899999 99999999775 689999999864432 234567788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||.+...
T Consensus 105 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999976432 23778888999999999999999776 999999999999999999999999998765
Q ss_pred cCCC--------CceeeccccCccccCccccc
Q 043136 868 QSDE--------SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 868 ~~~~--------~~~~~~Gt~~y~APE~~~~~ 891 (902)
.... .....+||+.|+|||++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 210 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN 210 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTT
T ss_pred ccccccccccccccccccccccccCHHHHhcc
Confidence 3221 12234799999999999873
No 158
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.93 E-value=2.2e-26 Score=267.34 Aligned_cols=176 Identities=28% Similarity=0.369 Sum_probs=145.2
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
...|...+.||+|+||.||+|+.. +++.||+|++.+.... ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 445777889999999999999764 6889999998643221 12245678999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CCEEEeecccc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE---MEARVADFGVA 864 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DFGla 864 (902)
|||+++|+|.+.+.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.. +.+||+|||+|
T Consensus 115 ~e~~~~g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 99999999999887653 3677888899999999999999776 9999999999999764 55999999999
Q ss_pred eeccCCCCceeeccccCccccCccccccc
Q 043136 865 KLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 865 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+...........+||+.|+|||++.+.+.
T Consensus 187 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 215 (494)
T 3lij_A 187 AVFENQKKMKERLGTAYYIAPEVLRKKYD 215 (494)
T ss_dssp EECBTTBCBCCCCSCTTTCCHHHHTTCBC
T ss_pred eECCCCccccccCCCcCeeCHHHHcccCC
Confidence 98876666667789999999999876543
No 159
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=8.3e-27 Score=248.52 Aligned_cols=171 Identities=25% Similarity=0.435 Sum_probs=144.6
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|...+.||+|+||.||+|.+.+++.||+|++...... .+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 35566899999999999999888899999998644322 24578999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++..... .+++..++.++.|+++|++|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHhcCc----ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999975432 4778888999999999999999776 999999999999999999999999999865432
Q ss_pred C--CceeeccccCccccCcccccc
Q 043136 871 E--SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~--~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. ......||+.|+|||++.+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~ 183 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSR 183 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCC
T ss_pred ccccccCcccccccCCHHHhcCCC
Confidence 1 123345788899999986543
No 160
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.93 E-value=2.2e-26 Score=248.43 Aligned_cols=171 Identities=25% Similarity=0.370 Sum_probs=142.9
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 556689999999999999764 689999999864432 223445678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++ ++.+.+.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~-~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 83 CDQ-DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CSE-EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred CCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 965 6666665432 24778889999999999999999776 999999999999999999999999999876533
Q ss_pred -CCceeeccccCccccCccccc
Q 043136 871 -ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 -~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.......||+.|+|||++.+.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~ 176 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGA 176 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTC
T ss_pred cccccCCccccCCcChHHHcCC
Confidence 233456899999999998664
No 161
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.93 E-value=1.3e-26 Score=268.95 Aligned_cols=176 Identities=28% Similarity=0.383 Sum_probs=147.4
Q ss_pred HHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
+...|.+.+.||+|+||.||+|... +++.||||++.+.... ......+.+|++++++++||||+++++++.+....|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 3456778899999999999999764 6899999998533211 1234568899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc---CCCCEEEeeccc
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD---GEMEARVADFGV 863 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~---~~~~~kl~DFGl 863 (902)
||||+++|+|.+.+.... .+++..+..++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||+
T Consensus 99 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp EECCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 999999999999887653 3678888999999999999999776 99999999999995 456799999999
Q ss_pred ceeccCCCCceeeccccCccccCcccccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+...........+||+.|+|||++.+.+
T Consensus 171 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 199 (486)
T 3mwu_A 171 STCFQQNTKMKDRIGTAYYIAPEVLRGTY 199 (486)
T ss_dssp TTTBCCC----CCTTGGGGCCGGGGGSCC
T ss_pred CeECCCCCccCCCcCCCCCCCHHHhCCCC
Confidence 98876666666778999999999998753
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.93 E-value=2e-26 Score=246.72 Aligned_cols=174 Identities=27% Similarity=0.377 Sum_probs=129.8
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|.+.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 55668999999999999976 57899999998543222222246688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.++.....
T Consensus 93 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 93 CHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp CTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred CCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999987532 24778889999999999999999776 999999999999999999999999999876432
Q ss_pred -CCceeeccccCccccCcccccc
Q 043136 871 -ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 -~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.......||+.|+|||++.+..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~ 188 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSA 188 (278)
T ss_dssp -----------------------
T ss_pred CCcceeccCCCCcCCcchhcCCC
Confidence 2234567999999999987653
No 163
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.93 E-value=1.9e-26 Score=276.50 Aligned_cols=173 Identities=25% Similarity=0.296 Sum_probs=146.9
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|.+.+.||+|+||.||+|+.. +++.||||++.+.........+.+..|.+++..+ +||+|+++++++++.+..|+|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 455689999999999999764 5889999998643322223345677899999988 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc-
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ- 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~- 868 (902)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+.+ ||||||||+|||++.++++||+|||+|+...
T Consensus 423 ~~~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 423 YVNGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred CcCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999998653 3778888999999999999999776 9999999999999999999999999998643
Q ss_pred CCCCceeeccccCccccCcccccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........+||+.|||||++.+..
T Consensus 495 ~~~~~~~~~GT~~Y~APE~l~~~~ 518 (674)
T 3pfq_A 495 DGVTTKTFCGTPDYIAPEIIAYQP 518 (674)
T ss_dssp TTCCBCCCCSCSSSCCHHHHTCCC
T ss_pred CCcccccccCCCcccCHhhhcCCC
Confidence 344456688999999999997643
No 164
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.93 E-value=6.3e-26 Score=252.84 Aligned_cols=176 Identities=27% Similarity=0.428 Sum_probs=151.5
Q ss_pred HHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccc-----hhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEec
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKH-----KENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSN 780 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~-----~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~ 780 (902)
+...|...+.||+|+||.||+|.+. +|+.||||++.... .......+.+.+|+++++++ +||||+++++++..
T Consensus 92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 171 (365)
T 2y7j_A 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171 (365)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence 3355777899999999999999875 69999999985432 12223356688999999998 79999999999999
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEee
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVAD 860 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 860 (902)
....|+||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 172 ~~~~~lv~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 172 SSFMFLVFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred CCEEEEEEEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEe
Confidence 999999999999999999997543 3778888999999999999999776 99999999999999999999999
Q ss_pred cccceeccCCCCceeeccccCccccCccccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
||++..+.........+||+.|+|||++.+.
T Consensus 244 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 274 (365)
T 2y7j_A 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCS 274 (365)
T ss_dssp CTTCEECCTTCCBCCCCSCGGGCCHHHHHHT
T ss_pred cCcccccCCCcccccCCCCCCccChhhcccc
Confidence 9999988766666678899999999998654
No 165
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=256.05 Aligned_cols=169 Identities=28% Similarity=0.423 Sum_probs=129.0
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4566789999999999999775 57899999985332 23557789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCCEEEeeccccee
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---EMEARVADFGVAKL 866 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---~~~~kl~DFGla~~ 866 (902)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.
T Consensus 129 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-----YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCSCBHHHHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred eCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999986532 3678889999999999999999776 999999999999975 88999999999987
Q ss_pred ccCCCCceeeccccCccccCcccccc
Q 043136 867 IQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
..........+||+.|+|||++.+..
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~ 226 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCA 226 (349)
T ss_dssp ------------CGGGSCHHHHTTCC
T ss_pred cCcccccccccCCCCccCHHHhcCCC
Confidence 76555556678999999999997754
No 166
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.93 E-value=6.3e-26 Score=243.65 Aligned_cols=173 Identities=25% Similarity=0.352 Sum_probs=148.8
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4566789999999999999764 588999999854432 33455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC---EEEeeccccee
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME---ARVADFGVAKL 866 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~---~kl~DFGla~~ 866 (902)
|+++++|.+.+.... .+++..+..++.|++.|++|||+.+ |+||||||+||+++.++. +||+|||.+..
T Consensus 86 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 86 LVTGGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 999999999887653 3678888999999999999999776 999999999999986655 99999999988
Q ss_pred ccCCCCceeeccccCccccCcccccc
Q 043136 867 IQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
...........||+.|+|||++.+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~ 183 (284)
T 3kk8_A 158 VNDSEAWHGFAGTPGYLSPEVLKKDP 183 (284)
T ss_dssp CCSSCBCCCSCSCGGGCCHHHHTTCC
T ss_pred cccCccccCCCCCcCCcCchhhcCCC
Confidence 77666556678999999999997654
No 167
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.93 E-value=6e-27 Score=253.21 Aligned_cols=174 Identities=28% Similarity=0.445 Sum_probs=140.8
Q ss_pred HHhccCCcEeeecCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC--
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEM-----PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR-- 781 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~-- 781 (902)
...|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 34566778999999999999973 368899999985432 34456788999999999999999999998653
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeec
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADF 861 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 861 (902)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccC
Confidence 568999999999999999976432 4778889999999999999999776 999999999999999999999999
Q ss_pred ccceeccCCCC----ceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDES----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~----~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++....... .....||+.|+|||++.+..
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 193 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCC
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCC
Confidence 99987644322 22345778899999987654
No 168
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.93 E-value=1.2e-26 Score=260.05 Aligned_cols=171 Identities=22% Similarity=0.391 Sum_probs=143.0
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
+...+.||+|+||.||+|++. +++.||||++.... .....+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 455689999999999999875 68999999985432 233456688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.++++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 194 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 194 VQGGDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred CCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999976432 4678888999999999999999776 999999999999999999999999999865432
Q ss_pred CCc---eeeccccCccccCccccc
Q 043136 871 ESM---SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~~---~~~~Gt~~y~APE~~~~~ 891 (902)
... ....+++.|+|||++.+.
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~ 290 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYG 290 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHC
T ss_pred ceeecCCCCCCCcCcCCHhHhccC
Confidence 111 122357789999998654
No 169
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.93 E-value=3.1e-26 Score=266.82 Aligned_cols=176 Identities=26% Similarity=0.431 Sum_probs=146.7
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhH----------HHHHHHHHHHHHHhcCCcCeeEeEEeEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENI----------RRRRGVLAEVDVLGNVRHRNIVRLLGCC 778 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~----------~~~~~~~~Ei~il~~l~h~nIv~l~~~~ 778 (902)
..|.+.+.||+|+||.||+|+.. +++.||+|++.+...... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34666789999999999999764 578999999864332211 2246688999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---C
Q 043136 779 SNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM---E 855 (902)
Q Consensus 779 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~---~ 855 (902)
.+.+..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999987653 3778889999999999999999776 99999999999998776 6
Q ss_pred EEEeecccceeccCCCCceeeccccCccccCccccccc
Q 043136 856 ARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 856 ~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+||+|||+|+...........+||+.|+|||++.+.+.
T Consensus 188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 225 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYN 225 (504)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBC
T ss_pred EEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCC
Confidence 99999999998876666667789999999999876543
No 170
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.93 E-value=3.7e-26 Score=244.42 Aligned_cols=174 Identities=28% Similarity=0.430 Sum_probs=139.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|++. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4566789999999999999775 689999999854332222334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 92 YVSGGELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp CCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred ccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999997653 3677888999999999999999776 99999999999999999999999999988765
Q ss_pred CCCceeeccccCccccCcccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
........||+.|+|||++.+..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~ 186 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRL 186 (276)
T ss_dssp -------------CCTGGGTTSC
T ss_pred CcceecccCCccccCHHHHcCCC
Confidence 55555678999999999997653
No 171
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.93 E-value=4.7e-26 Score=244.52 Aligned_cols=177 Identities=27% Similarity=0.375 Sum_probs=145.7
Q ss_pred HHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhH---HHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENI---RRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC 783 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~---~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~ 783 (902)
+...|...+.||+|+||.||+|+.. +++.||+|++........ ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3456778899999999999999775 689999999864432211 124568899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC----CEEEe
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM----EARVA 859 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~----~~kl~ 859 (902)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++ .+||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~ 154 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLI 154 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEE
Confidence 999999999999999997543 3678889999999999999999776 99999999999998877 89999
Q ss_pred ecccceeccCCCCceeeccccCccccCcccccc
Q 043136 860 DFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 860 DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|||.++............||+.|+|||++.+..
T Consensus 155 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 187 (283)
T 3bhy_A 155 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP 187 (283)
T ss_dssp CCTTCEECC--------CCCGGGCCHHHHTTCC
T ss_pred ecccceeccCCCcccccCCCcCccCcceecCCC
Confidence 999998876555555678999999999987653
No 172
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.93 E-value=1.6e-26 Score=266.10 Aligned_cols=169 Identities=23% Similarity=0.382 Sum_probs=129.6
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec-----CCee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-----RECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-----~~~~ 784 (902)
.|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+.+|++++++++||||+++++++.. ....
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4667789999999999999654 68999999985432 234455678899999999999999999999843 3578
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||+ +|+|.+++.... .+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecc-ccchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccc
Confidence 9999998 579999986532 4778889999999999999999776 999999999999999999999999999
Q ss_pred eeccCCC----------------------------CceeeccccCccccCccc
Q 043136 865 KLIQSDE----------------------------SMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 865 ~~~~~~~----------------------------~~~~~~Gt~~y~APE~~~ 889 (902)
+...... .....+||++|||||++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 256 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence 8764221 234467899999999863
No 173
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.93 E-value=2.1e-26 Score=259.74 Aligned_cols=168 Identities=26% Similarity=0.365 Sum_probs=130.6
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhc-CCcCeeEeEEeEEec----CCee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGN-VRHRNIVRLLGCCSN----RECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~-l~h~nIv~l~~~~~~----~~~~ 784 (902)
++...+.||+|+||.||+|.+. +++.||||++... ..+.+|++++.+ .+||||+++++++.. ....
T Consensus 63 y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3334478999999999999764 6889999998421 234568887744 589999999999865 5678
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCCEEEeec
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---EMEARVADF 861 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---~~~~kl~DF 861 (902)
|+||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeCCCCcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEec
Confidence 99999999999999997542 224788899999999999999999776 999999999999987 789999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++...........+||+.|+|||++.+..
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 239 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCC
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCC
Confidence 9999876555556788999999999996643
No 174
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.93 E-value=3e-26 Score=250.47 Aligned_cols=175 Identities=25% Similarity=0.381 Sum_probs=134.5
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|... +++.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 3456688999999999999764 5899999998543321 223457789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccC-CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 790 YMPNGNLDDLLHAKNKG-ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|++ |+|.+++...... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 6999998765432 2234778888899999999999999776 9999999999999999999999999998765
Q ss_pred CC-CCceeeccccCccccCccccc
Q 043136 869 SD-ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 869 ~~-~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.. ......+||+.|+|||++.+.
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~ 183 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGS 183 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred CCcccCCCCcccccccCchHhhCC
Confidence 33 233456899999999998753
No 175
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.93 E-value=1.7e-26 Score=251.14 Aligned_cols=176 Identities=29% Similarity=0.414 Sum_probs=140.0
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
..|.+.+.||+|+||.||+|+.. ..+|+|++.... ......+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 34566789999999999999864 358888875432 23445677899999999999999999999875 455899999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+|+....
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 999999999987543 24778889999999999999999776 99999999999999999999999999986532
Q ss_pred ---CCCceeeccccCccccCcccccccCce
Q 043136 870 ---DESMSVIAGSYGYIAPGTFCFCFSVPF 896 (902)
Q Consensus 870 ---~~~~~~~~Gt~~y~APE~~~~~~~~p~ 896 (902)
........||+.|+|||++.+..+.++
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 214 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCC
Confidence 222345679999999999975444443
No 176
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.93 E-value=7.5e-27 Score=265.19 Aligned_cols=175 Identities=25% Similarity=0.359 Sum_probs=135.0
Q ss_pred HHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchh-----hHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec
Q 043136 707 VLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKE-----NIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN 780 (902)
Q Consensus 707 ~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~ 780 (902)
.....|...+.||+|+||.||+|.. .+++.||||++.+.... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4455677889999999999999966 45899999998654321 11223357889999999999999999999864
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CCEE
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE---MEAR 857 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~---~~~k 857 (902)
+..|+||||+++|+|.+++.... .+++.....++.|++.||+|||+++ |+||||||+||+++.+ +.+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEE
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEE
Confidence 45799999999999988876432 4778889999999999999999776 9999999999999654 4599
Q ss_pred EeecccceeccCCCCceeeccccCccccCcccc
Q 043136 858 VADFGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 858 l~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+|||+|+...........+||+.|+|||++.+
T Consensus 283 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 315 (419)
T 3i6u_A 283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315 (419)
T ss_dssp ECCSSTTTSCC-----------CTTCCTTTTC-
T ss_pred EeecccceecCCCccccccCCCCCccCceeeec
Confidence 999999998766555667889999999999864
No 177
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.8e-26 Score=257.54 Aligned_cols=178 Identities=26% Similarity=0.369 Sum_probs=147.6
Q ss_pred HhccCCcEeeecCceEEEEEEeC--------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEec
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP--------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSN 780 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~ 780 (902)
..+.+.+.||+|+||.||+|+.. .+..||||++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 35567789999999999999752 24679999985442 334556788999999999 89999999999999
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccC-----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKG-----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNIL 849 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NIL 849 (902)
.+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence 99999999999999999999865421 1235788999999999999999999776 999999999999
Q ss_pred EcCCCCEEEeecccceeccCCC---CceeeccccCccccCcccccc
Q 043136 850 LDGEMEARVADFGVAKLIQSDE---SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 850 l~~~~~~kl~DFGla~~~~~~~---~~~~~~Gt~~y~APE~~~~~~ 892 (902)
++.++.+||+|||+|+...... ......||+.|+|||++.+..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 269 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCC
Confidence 9999999999999998764332 223356788999999987654
No 178
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.93 E-value=3.8e-26 Score=250.41 Aligned_cols=164 Identities=27% Similarity=0.345 Sum_probs=123.1
Q ss_pred CcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEEEEEccC
Q 043136 715 DKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTMLLYEYMP 792 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 792 (902)
++.||+|+||.||+|.+. +++.||||++.+. ....+.+|+++++.+. ||||+++++++.+....|+||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 478999999999999764 6899999998432 1234668999999996 9999999999999999999999999
Q ss_pred CCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---CEEEeecccceeccC
Q 043136 793 NGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM---EARVADFGVAKLIQS 869 (902)
Q Consensus 793 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~---~~kl~DFGla~~~~~ 869 (902)
+|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+++....
T Consensus 90 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 90 GGELFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp SCBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 999999997643 4788889999999999999999776 99999999999998766 799999999987643
Q ss_pred C-CCceeeccccCccccCcccccc
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. ......+||+.|+|||++.+..
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~ 185 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNG 185 (325)
T ss_dssp ----------------------CC
T ss_pred CCCcccccCCCcCccCHHHhcCCC
Confidence 3 2345578999999999997654
No 179
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.93 E-value=3.1e-26 Score=255.14 Aligned_cols=182 Identities=22% Similarity=0.287 Sum_probs=151.2
Q ss_pred ccCCCHHHHHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-----cCeeE
Q 043136 699 RLNFTADDVLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-----HRNIV 772 (902)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----h~nIv 772 (902)
...+...+++...|.+.+.||+|+||.||+|++ .+++.||||++... ....+.+..|++++++++ ||||+
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 345566666677888889999999999999976 46889999998532 233445677999998886 99999
Q ss_pred eEEeEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC
Q 043136 773 RLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG 852 (902)
Q Consensus 773 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~ 852 (902)
++++++...+..|+||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+||+++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDD 172 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcc
Confidence 9999999999999999999 9999999976532 23677888999999999999999776 999999999999975
Q ss_pred -------------------------CCCEEEeecccceeccCCCCceeeccccCccccCccccccc
Q 043136 853 -------------------------EMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 853 -------------------------~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
++.+||+|||+|+..... ....+||+.|+|||++.+...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCC
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCC
Confidence 789999999999875432 345689999999999977543
No 180
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.93 E-value=3.6e-26 Score=260.78 Aligned_cols=169 Identities=25% Similarity=0.379 Sum_probs=139.8
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC-----Cee
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR-----ECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~-----~~~ 784 (902)
.|.+.+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|++++++++||||+++++++... ...
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 466778999999999999976 458899999986432 3344566788999999999999999999998765 578
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||++ |+|.+++.... .+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||+|
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 99999995 69999987532 4788889999999999999999776 999999999999999999999999999
Q ss_pred eeccCCC-----------------------CceeeccccCccccCccc
Q 043136 865 KLIQSDE-----------------------SMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 865 ~~~~~~~-----------------------~~~~~~Gt~~y~APE~~~ 889 (902)
+...... .....+||++|+|||++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 224 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL 224 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence 9764332 135678999999999863
No 181
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.93 E-value=2.5e-26 Score=263.88 Aligned_cols=170 Identities=27% Similarity=0.317 Sum_probs=136.2
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC------Ce
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR------EC 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~------~~ 783 (902)
.|...+.||+|+||.||+|.+ .+++.||||++.... ......+++.+|+++++.++||||+++++++... ..
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 456678999999999999965 468999999986442 2344566788999999999999999999999654 35
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 142 ~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEe
Confidence 7999999965 56666642 2677888899999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+...........+||+.|+|||++.+..
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 239 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMG 239 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCC
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCC
Confidence 99876665667789999999999997753
No 182
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.93 E-value=2e-26 Score=254.83 Aligned_cols=177 Identities=28% Similarity=0.411 Sum_probs=145.3
Q ss_pred hccCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~ 784 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 4556789999999999999764 34889999986443 234456789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccC-------------------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCC
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKG-------------------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKP 845 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp 845 (902)
|+||||+++|+|.+++...... ....+++..++.++.||++||+|||+++ |+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCc
Confidence 9999999999999999764311 1145788899999999999999999776 99999999
Q ss_pred CCEEEcCCCCEEEeecccceeccCCC---CceeeccccCccccCcccccc
Q 043136 846 SNILLDGEMEARVADFGVAKLIQSDE---SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 846 ~NILl~~~~~~kl~DFGla~~~~~~~---~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+||+++.++.+||+|||+++...... ......||+.|+|||++.+..
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 252 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR 252 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCC
Confidence 99999999999999999998764322 223456899999999986543
No 183
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.93 E-value=4.9e-26 Score=243.95 Aligned_cols=173 Identities=28% Similarity=0.404 Sum_probs=142.7
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 556689999999999999664 5779999998544333333356688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++.... .+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 91 APLGTVYRELQKLS-----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp CTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999987653 3677888999999999999999665 999999999999999999999999998665432
Q ss_pred CCceeeccccCccccCccccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
......||+.|+|||++.+...
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~ 184 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMH 184 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCC
T ss_pred -cccccCCCCCccCHhHhccCCC
Confidence 2345679999999999876543
No 184
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.93 E-value=3.9e-26 Score=247.46 Aligned_cols=167 Identities=27% Similarity=0.405 Sum_probs=136.1
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhc--CCcCeeEeEEeEEec----CCe
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGN--VRHRNIVRLLGCCSN----REC 783 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~--l~h~nIv~l~~~~~~----~~~ 783 (902)
..|...+.||+|+||.||+|+. +++.||||++.... ...+.+|.+++.. ++||||+++++++.. ...
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 4566778999999999999987 78999999985332 1233445555554 799999999998654 346
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCEEEcCCCC
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLH--------HDCDPVIVHRDLKPSNILLDGEME 855 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrDlKp~NILl~~~~~ 855 (902)
.|+||||+++|+|.++++.. .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSC
T ss_pred eEEehhhccCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCC
Confidence 89999999999999999532 4788889999999999999999 555 999999999999999999
Q ss_pred EEEeecccceeccCCCCc-----eeeccccCccccCcccccc
Q 043136 856 ARVADFGVAKLIQSDESM-----SVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 856 ~kl~DFGla~~~~~~~~~-----~~~~Gt~~y~APE~~~~~~ 892 (902)
+||+|||+|+........ ...+||+.|+|||++.+..
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 193 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcC
Confidence 999999999876544332 2347999999999997753
No 185
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.93 E-value=3.4e-26 Score=249.53 Aligned_cols=177 Identities=28% Similarity=0.387 Sum_probs=146.8
Q ss_pred HhccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC 783 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~ 783 (902)
..|...+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3456778999999999999975 245789999986433 23455678899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhccC-------------------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKG-------------------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLK 844 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlK 844 (902)
.++||||+++|+|.+++...... ....+++..++.++.|+++||+|||+++ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 99999999999999999865321 1234788889999999999999999776 9999999
Q ss_pred CCCEEEcCCCCEEEeecccceeccCCCC---ceeeccccCccccCccccc
Q 043136 845 PSNILLDGEMEARVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 845 p~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 891 (902)
|+||+++.++.+||+|||+++....... .....||+.|+|||++.+.
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 227 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH 227 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCC
Confidence 9999999999999999999987654332 2334578899999998654
No 186
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=3.3e-26 Score=253.28 Aligned_cols=179 Identities=26% Similarity=0.328 Sum_probs=142.6
Q ss_pred HHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchh--hHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKE--NIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~--~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
...|...+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 45677889999999999999976 46889999998543211 2234567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccC-----------------------------------CCcccCHHHHHHHHHHHHHHHHHH
Q 043136 786 LLYEYMPNGNLDDLLHAKNKG-----------------------------------ENLVADWVTRYKIALGVAQGICYL 830 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~~~~~~~~~i~~qi~~~L~~L 830 (902)
+||||+++|+|.+++...... .....++..++.++.|+++||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998532111 012235667788999999999999
Q ss_pred HhCCCCCeEEcCCCCCCEEEcCCC--CEEEeecccceeccCCC-----CceeeccccCccccCcccc
Q 043136 831 HHDCDPVIVHRDLKPSNILLDGEM--EARVADFGVAKLIQSDE-----SMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 831 H~~~~~~ivHrDlKp~NILl~~~~--~~kl~DFGla~~~~~~~-----~~~~~~Gt~~y~APE~~~~ 890 (902)
|+.+ |+||||||+||+++.++ .+||+|||+++.+.... ......||+.|+|||++.+
T Consensus 185 H~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 185 HNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred HHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence 9776 99999999999998776 89999999998764321 1345679999999999965
No 187
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.93 E-value=7.8e-26 Score=246.22 Aligned_cols=174 Identities=21% Similarity=0.278 Sum_probs=141.6
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++...+..|+|||
T Consensus 35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 2h34_A 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR 114 (309)
T ss_dssp CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence 3566789999999999999764 688999999865544445556778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 115 LINGVDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp CCCCEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred ecCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 999999999997643 3678888999999999999999776 99999999999999999999999999987644
Q ss_pred CC--CceeeccccCccccCcccccc
Q 043136 870 DE--SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~--~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.. ......||+.|+|||++.+..
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~ 211 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESH 211 (309)
T ss_dssp ----------CCGGGCCGGGTCC--
T ss_pred cccccccccCCCcCccCHHHHcCCC
Confidence 32 223467999999999997653
No 188
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.93 E-value=6e-26 Score=243.71 Aligned_cols=176 Identities=24% Similarity=0.443 Sum_probs=149.1
Q ss_pred HHHHHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec--
Q 043136 704 ADDVLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-- 780 (902)
Q Consensus 704 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-- 780 (902)
.++.+...|...+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 77 (284)
T 2a19_B 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFD 77 (284)
T ss_dssp CCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEE
T ss_pred ccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccc
Confidence 34556667888899999999999999775 68999999985433 235679999999999999999998854
Q ss_pred --------------CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCC
Q 043136 781 --------------RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPS 846 (902)
Q Consensus 781 --------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~ 846 (902)
....|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~ 151 (284)
T 2a19_B 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPS 151 (284)
T ss_dssp EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGG
T ss_pred cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHH
Confidence 3458999999999999999976432 24778888999999999999999776 999999999
Q ss_pred CEEEcCCCCEEEeecccceeccCCCCceeeccccCccccCcccccc
Q 043136 847 NILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 847 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+++.++.+||+|||+++............||+.|+|||++.+..
T Consensus 152 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 197 (284)
T 2a19_B 152 NIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD 197 (284)
T ss_dssp GEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSC
T ss_pred HEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCC
Confidence 9999999999999999999876655555678999999999987653
No 189
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=256.15 Aligned_cols=177 Identities=24% Similarity=0.330 Sum_probs=145.0
Q ss_pred hccCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~ 784 (902)
.|.+.+.||+|+||.||+|+.. +++.||||++.... .......+.+|+.++++++||||+++++++.+....
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 4556789999999999999743 46789999985332 234455688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccC--CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC---CEEEe
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKG--ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM---EARVA 859 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~---~~kl~ 859 (902)
|+||||+++|+|.+++...+.. ....+++..++.++.|+++||+|||+++ |+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999999875432 2235788899999999999999999776 99999999999999555 59999
Q ss_pred ecccceeccCC---CCceeeccccCccccCcccccc
Q 043136 860 DFGVAKLIQSD---ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 860 DFGla~~~~~~---~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|||+|+..... .......||+.|+|||++.+..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~ 262 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI 262 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCC
Confidence 99999865321 2234457899999999986543
No 190
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=7.8e-26 Score=241.32 Aligned_cols=188 Identities=24% Similarity=0.244 Sum_probs=98.9
Q ss_pred cccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc
Q 043136 146 ISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE 225 (902)
Q Consensus 146 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 225 (902)
++.+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|+.+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 33444444444444444431 2344455555555555555544444455555555555555555544444455555555
Q ss_pred EEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCC
Q 043136 226 RIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQ 305 (902)
Q Consensus 226 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 305 (902)
+|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+|++|++++..|..+..+++|++|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 55555555555444445555555555555555555444445555555555555555555555555555566666666665
Q ss_pred CccccCccccccCCCCEEEccCccccccCChhhhhcc
Q 043136 306 LSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLA 342 (902)
Q Consensus 306 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 342 (902)
+.+. +++|++|+++.|.++|.+|..++.+.
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 5432 33455566666666666665555443
No 191
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=4.5e-26 Score=256.48 Aligned_cols=172 Identities=30% Similarity=0.459 Sum_probs=133.2
Q ss_pred HHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCC--e
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRE--C 783 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~--~ 783 (902)
.-..|...+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 345677788999999999999975 468999999985432 23344566789999999997 999999999997544 6
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 899999996 6999988753 3677888899999999999999776 99999999999999999999999999
Q ss_pred ceeccC----------------------CCCceeeccccCccccCcccc
Q 043136 864 AKLIQS----------------------DESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 864 a~~~~~----------------------~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+.+.. .......+||++|+|||++.+
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 204 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence 987532 112244689999999999976
No 192
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.93 E-value=3.8e-26 Score=250.79 Aligned_cols=188 Identities=25% Similarity=0.359 Sum_probs=150.7
Q ss_pred ccCCCHHHHHHHhccCC-cEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEE
Q 043136 699 RLNFTADDVLECLSMSD-KILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLL 775 (902)
Q Consensus 699 ~~~~~~~~~~~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~ 775 (902)
...|...+.+...|.+. +.||+|+||.||+|... +++.||+|++....... .....+.+|+.+++++ .||||++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 34566667777777766 89999999999999764 58999999986543221 2345678899999999 579999999
Q ss_pred eEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---
Q 043136 776 GCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG--- 852 (902)
Q Consensus 776 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~--- 852 (902)
+++.+.+..|+||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~ 169 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYP 169 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTT
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCC
Confidence 99999999999999999999999885432 224788889999999999999999776 999999999999987
Q ss_pred CCCEEEeecccceeccCCCCceeeccccCccccCccccccc
Q 043136 853 EMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 853 ~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
++.+||+|||+++...........+||+.|+|||++.+...
T Consensus 170 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 210 (327)
T 3lm5_A 170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI 210 (327)
T ss_dssp BCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCC
T ss_pred CCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCC
Confidence 78999999999998766555566789999999999976543
No 193
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.93 E-value=4.1e-26 Score=257.40 Aligned_cols=174 Identities=27% Similarity=0.441 Sum_probs=146.2
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC--eeEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE--CTML 786 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~--~~~l 786 (902)
..|.+.+.||+|+||.||+|++. +++.||||++...... ...+.+.+|++++++++||||+++++++...+ ..|+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 35667789999999999999765 4899999998643322 22455778999999999999999999998755 7799
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCCEEEeecc
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL----DGEMEARVADFG 862 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl----~~~~~~kl~DFG 862 (902)
||||+++|+|.+++...... ..+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999765432 23788889999999999999999776 9999999999999 777889999999
Q ss_pred cceeccCCCCceeeccccCccccCcccc
Q 043136 863 VAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 863 la~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
+|+...........+||+.|+|||++.+
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~ 189 (396)
T 4eut_A 162 AARELEDDEQFVSLYGTEEYLHPDMYER 189 (396)
T ss_dssp GCEECCCGGGSSCSSSCCTTCCHHHHHH
T ss_pred CceEccCCCccccccCCccccCHHHhhc
Confidence 9998766555556789999999999864
No 194
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.93 E-value=7.3e-26 Score=246.65 Aligned_cols=171 Identities=25% Similarity=0.361 Sum_probs=139.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|++. +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 3556789999999999999774 58999999985543 233445678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|++++++.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.++....
T Consensus 83 ~~~~~~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp CCSEEHHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred eCCCchHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999988876432 3678888999999999999999776 99999999999999999999999999987653
Q ss_pred C-CCceeeccccCccccCcccc
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~ 890 (902)
. ......+||+.|+|||++.+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~ 176 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVG 176 (311)
T ss_dssp -----------GGGCCHHHHHT
T ss_pred cccccCCCcCCccccChHHHhc
Confidence 3 23355689999999999865
No 195
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.93 E-value=3.8e-26 Score=247.73 Aligned_cols=173 Identities=27% Similarity=0.436 Sum_probs=142.4
Q ss_pred HhccCCcEeeecCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC--C
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-----PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR--E 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~--~ 782 (902)
..|...+.||+|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||+++++++... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 3466778999999999999973 4689999999854332 22345688999999999999999999999876 6
Q ss_pred eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecc
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFG 862 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 862 (902)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCT
T ss_pred eEEEEEEeCCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccc
Confidence 68999999999999999965432 3778889999999999999999776 9999999999999999999999999
Q ss_pred cceeccCCCC----ceeeccccCccccCccccc
Q 043136 863 VAKLIQSDES----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 863 la~~~~~~~~----~~~~~Gt~~y~APE~~~~~ 891 (902)
+++....... .....||+.|+|||++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 204 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS 204 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCC
Confidence 9988754432 2335688889999998654
No 196
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.93 E-value=1.9e-26 Score=247.68 Aligned_cols=171 Identities=24% Similarity=0.349 Sum_probs=142.0
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|...+.||+|+||.||+|++.++..||+|++...... .+++.+|++++++++||||+++++++.+.+..|+||||
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 45567899999999999999988889999998644322 24578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 101 MANGCLLNYLREMRH----RFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CTTCBHHHHHHCGGG----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred cCCCcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999999976432 3778889999999999999999776 999999999999999999999999999865432
Q ss_pred C--CceeeccccCccccCcccccc
Q 043136 871 E--SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~--~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. ......||+.|+|||++.+..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~ 197 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSK 197 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCC
T ss_pred ccccccCCccCcccCCHHHhccCC
Confidence 1 122345778899999987543
No 197
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.1e-25 Score=248.05 Aligned_cols=178 Identities=27% Similarity=0.424 Sum_probs=141.5
Q ss_pred HHHHHHHhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhc--CCcCeeEeEEeEEecC
Q 043136 704 ADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGN--VRHRNIVRLLGCCSNR 781 (902)
Q Consensus 704 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~--l~h~nIv~l~~~~~~~ 781 (902)
..+.....|...+.||+|+||.||+|+.. ++.||||++..... ....+|.+++.. ++||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 34455667888899999999999999874 89999999843221 223445555555 4899999999999876
Q ss_pred ----CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEcCCCCCCEEEcC
Q 043136 782 ----ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC-----DPVIVHRDLKPSNILLDG 852 (902)
Q Consensus 782 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivHrDlKp~NILl~~ 852 (902)
...|+||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 6889999999999999999653 3778889999999999999999660 115999999999999999
Q ss_pred CCCEEEeecccceeccCCCCc-----eeeccccCccccCcccccccC
Q 043136 853 EMEARVADFGVAKLIQSDESM-----SVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 853 ~~~~kl~DFGla~~~~~~~~~-----~~~~Gt~~y~APE~~~~~~~~ 894 (902)
++.+||+|||+|+.+...... ...+||+.|+|||++.+....
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 224 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCT
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCC
Confidence 999999999999876433221 245799999999999776443
No 198
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.93 E-value=1.5e-25 Score=240.92 Aligned_cols=175 Identities=23% Similarity=0.324 Sum_probs=145.3
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~l 786 (902)
...|...+.||+|+||.||+|... +++.||+|++....... .....+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 345677889999999999999775 68999999986543322 3345678899999998 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-------------
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE------------- 853 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~------------- 853 (902)
||||+++|+|.+++...... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999765321 124678889999999999999999776 9999999999999844
Q ss_pred ------CCEEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 854 ------MEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 854 ------~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
..+||+|||.++...... ...||+.|+|||++.+.
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~ 205 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQEN 205 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTC
T ss_pred cccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCC
Confidence 479999999998765432 34699999999999765
No 199
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.93 E-value=2.2e-26 Score=256.17 Aligned_cols=178 Identities=28% Similarity=0.365 Sum_probs=144.5
Q ss_pred HhccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~ 782 (902)
..|...+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 4566778999999999999963 346899999985432 234456789999999999 7999999999998755
Q ss_pred -eeEEEEEccCCCCHHHHHHhhccCC------------------------------------------------------
Q 043136 783 -CTMLLYEYMPNGNLDDLLHAKNKGE------------------------------------------------------ 807 (902)
Q Consensus 783 -~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------------ 807 (902)
..++||||+++|+|.++++......
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 4899999999999999997653210
Q ss_pred -------CcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCCC---ceeec
Q 043136 808 -------NLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDES---MSVIA 877 (902)
Q Consensus 808 -------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~---~~~~~ 877 (902)
...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....... .....
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 112788889999999999999999776 99999999999999999999999999987643332 23457
Q ss_pred cccCccccCcccccc
Q 043136 878 GSYGYIAPGTFCFCF 892 (902)
Q Consensus 878 Gt~~y~APE~~~~~~ 892 (902)
||+.|+|||++.+..
T Consensus 257 ~t~~y~aPE~~~~~~ 271 (359)
T 3vhe_A 257 LPLKWMAPETIFDRV 271 (359)
T ss_dssp ECGGGCCHHHHHHCC
T ss_pred CCceeEChhhhcCCC
Confidence 899999999986543
No 200
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.1e-25 Score=240.08 Aligned_cols=187 Identities=27% Similarity=0.318 Sum_probs=90.7
Q ss_pred hhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCC
Q 043136 170 FVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLK 249 (902)
Q Consensus 170 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 249 (902)
+..+++|++|+|++|.+++. +.+.++++|++|+|++|++++..+..|+.+++|++|++++|++++..+..|..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 44445555555555554431 2344455555555555555544444445555555555555555544444445555555
Q ss_pred EEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcc
Q 043136 250 YMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNV 329 (902)
Q Consensus 250 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 329 (902)
+|+|++|++++..+..|.++++|++|++++|++++..+..++.+++|++|+|++|++++..|..+..+++|++|++++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 55555555554444444455555555555555554444444445555555555555554444444455555555555554
Q ss_pred ccccCChhhhhccccceEEecCceeccccCccccCC
Q 043136 330 LFGEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSN 365 (902)
Q Consensus 330 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 365 (902)
+.+..| +|+.++++.|+++|.+|..++.+
T Consensus 217 ~~~~~~-------~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 217 WDCTCP-------GIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp BCCCTT-------TTHHHHHHHHHTGGGBBCTTSCB
T ss_pred ccccCc-------HHHHHHHHHHhCCCcccCccccc
Confidence 443322 34444445555555555444433
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=1.9e-26 Score=270.46 Aligned_cols=166 Identities=21% Similarity=0.215 Sum_probs=125.9
Q ss_pred eeecCceEEEEEE-eCCCcEEEEEEecccc-------hhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEE
Q 043136 718 LGMGSTGTVYKAE-MPGGEIIAVKKLWGKH-------KENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 718 iG~G~~g~Vy~~~-~~~~~~vavK~i~~~~-------~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.+.|+.|.+..++ .-.|+.||+|.+.+.. .......+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4666666666652 3358889999986432 22345567899999999999 6999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||++|++|.+++...+. ++.. +|+.||+.||+|+|+++ ||||||||+|||++++|.+||+|||+|+...
T Consensus 322 Eyv~G~~L~d~i~~~~~-----l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE-----IDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHHTTCC-----CCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHHhCCC-----CCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999976432 3432 58999999999999776 9999999999999999999999999998765
Q ss_pred CC-CCceeeccccCccccCcccccccC
Q 043136 869 SD-ESMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 869 ~~-~~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
.. ....+.+||+.|||||++.+.+..
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g~~~~ 417 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAENKSW 417 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------
T ss_pred CCCccccCceechhhccHHHhCCCCCC
Confidence 43 334567899999999999886543
No 202
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.93 E-value=3.6e-26 Score=248.78 Aligned_cols=180 Identities=27% Similarity=0.398 Sum_probs=141.8
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchh--hHHHHHHHHHHHHHHhcC---CcCeeEeEEeEEe
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKE--NIRRRRGVLAEVDVLGNV---RHRNIVRLLGCCS 779 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~--~~~~~~~~~~Ei~il~~l---~h~nIv~l~~~~~ 779 (902)
++....|...+.||+|+||.||+|++ .+++.||+|++...... .......+.+|+++++++ +||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 45556778889999999999999976 56899999998533211 001112345677766665 5999999999997
Q ss_pred cCC-----eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC
Q 043136 780 NRE-----CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM 854 (902)
Q Consensus 780 ~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~ 854 (902)
... ..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGG 157 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTS
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCC
Confidence 654 5799999996 699999876432 23788899999999999999999776 99999999999999999
Q ss_pred CEEEeecccceeccCCCCceeeccccCccccCcccccc
Q 043136 855 EARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 855 ~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.+||+|||+|+...........+||+.|+|||++.+..
T Consensus 158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 195 (308)
T 3g33_A 158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195 (308)
T ss_dssp CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSC
T ss_pred CEEEeeCccccccCCCcccCCccccccccCchHHcCCC
Confidence 99999999998776655566678999999999986654
No 203
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.93 E-value=1.5e-26 Score=249.43 Aligned_cols=180 Identities=28% Similarity=0.404 Sum_probs=135.5
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
|+....|...+.||+|+||.||+|+.. ..||+|++.... ......+.+.+|++++++++||||+++++++ .....+
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence 444556777899999999999999864 359999985443 2344567789999999999999999999965 456689
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 96 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 168 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLAT 168 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC---
T ss_pred EEEEecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecc
Confidence 9999999999999986432 24778889999999999999999776 9999999999999999999999999998
Q ss_pred eccC---CCCceeeccccCccccCcccccccCce
Q 043136 866 LIQS---DESMSVIAGSYGYIAPGTFCFCFSVPF 896 (902)
Q Consensus 866 ~~~~---~~~~~~~~Gt~~y~APE~~~~~~~~p~ 896 (902)
.... ........||+.|+|||++....+.++
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 202 (289)
T 3og7_A 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCS
T ss_pred ccccccccccccccCCCccccCchhhcccCCCCC
Confidence 6543 222344679999999999975444443
No 204
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.93 E-value=3.1e-26 Score=251.89 Aligned_cols=170 Identities=19% Similarity=0.216 Sum_probs=143.2
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|...+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 355678999999999999975 5789999999854322 23467899999999 8999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC-----EEEeeccc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME-----ARVADFGV 863 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~-----~kl~DFGl 863 (902)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 85 e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp ECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EeC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 999 999999997642 24788899999999999999999776 999999999999998887 99999999
Q ss_pred ceeccCCCC--------ceeeccccCccccCccccccc
Q 043136 864 AKLIQSDES--------MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 864 a~~~~~~~~--------~~~~~Gt~~y~APE~~~~~~~ 893 (902)
|+.+..... ....+||+.|+|||++.+...
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 194 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQ 194 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCC
Confidence 997644322 245789999999999987543
No 205
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.93 E-value=5.8e-26 Score=242.14 Aligned_cols=174 Identities=29% Similarity=0.449 Sum_probs=132.7
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhh-HHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKEN-IRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~-~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|.+ .++.||||++....... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 345678999999999999987 48899999985433222 2234668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC--------CCCEEEeec
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG--------EMEARVADF 861 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~--------~~~~kl~DF 861 (902)
|+++++|.+++... .+++..++.++.|+++|++|||+++..+|+||||||+||+++. ++.+||+||
T Consensus 87 ~~~~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 87 FARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp CCTTEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred cCCCCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999988532 4678888999999999999999765445999999999999986 678999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|.++....... ....||+.|+|||++.+..
T Consensus 161 g~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~ 190 (271)
T 3dtc_A 161 GLAREWHRTTK-MSAAGAYAWMAPEVIRASM 190 (271)
T ss_dssp CC--------------CCGGGSCHHHHHHCC
T ss_pred Ccccccccccc-cCCCCccceeCHHHhccCC
Confidence 99987654332 3467999999999987654
No 206
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.93 E-value=9e-26 Score=248.91 Aligned_cols=168 Identities=24% Similarity=0.317 Sum_probs=140.3
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~l 786 (902)
...|...+.||+|+||.||+|... +++.||+|++.+.... ..+|++++.++ +||||+++++++.+.+..|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 345777789999999999999764 6889999998544322 34588888777 79999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC----CCEEEeecc
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE----MEARVADFG 862 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~----~~~kl~DFG 862 (902)
||||++||+|.+++...+ .+++.....++.||+.||+|||+++ |+||||||+||++.++ +.+||+|||
T Consensus 94 v~E~~~gg~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK-----FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EECCCCSCBHHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 999999999999987543 3778888999999999999999776 9999999999998543 359999999
Q ss_pred cceeccCC-CCceeeccccCccccCccccc
Q 043136 863 VAKLIQSD-ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 863 la~~~~~~-~~~~~~~Gt~~y~APE~~~~~ 891 (902)
+++..... ......+||+.|+|||++.+.
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 195 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQ 195 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHH
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCC
Confidence 99976543 334567899999999998653
No 207
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.93 E-value=1.2e-25 Score=241.55 Aligned_cols=173 Identities=26% Similarity=0.373 Sum_probs=146.0
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 3566789999999999999765 578899999854322222224568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++.... .+++.....++.|+++|++|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 95 FAPRGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred eCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999997653 3677888999999999999999665 99999999999999999999999999976543
Q ss_pred CCCceeeccccCccccCcccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. ......||+.|+|||++.+..
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~ 188 (284)
T 2vgo_A 167 L-RRRTMCGTLDYLPPEMIEGKT 188 (284)
T ss_dssp S-CBCCCCSCGGGCCHHHHTTCC
T ss_pred c-ccccccCCCCcCCHHHhccCC
Confidence 2 234567999999999997654
No 208
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.93 E-value=5e-26 Score=249.37 Aligned_cols=179 Identities=23% Similarity=0.347 Sum_probs=131.9
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCc----EEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee-
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGE----IIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT- 784 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~----~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~- 784 (902)
..|...+.||+|+||.||+|++.... .||||++..... .....+.+.+|++++++++||||+++++++...+..
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 34667789999999999999765432 799999854322 223456788999999999999999999999877655
Q ss_pred -----EEEEEccCCCCHHHHHHhhccC-CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEE
Q 043136 785 -----MLLYEYMPNGNLDDLLHAKNKG-ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARV 858 (902)
Q Consensus 785 -----~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl 858 (902)
++||||+++|+|.+++...... ....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEE
Confidence 9999999999999999765432 2235788899999999999999999776 999999999999999999999
Q ss_pred eecccceeccCCCC---ceeeccccCccccCcccccc
Q 043136 859 ADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 859 ~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~ 892 (902)
+|||+|+....... .....||+.|+|||++.+..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 215 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL 215 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCC
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCC
Confidence 99999987644332 22345788999999987654
No 209
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.1e-24 Score=232.24 Aligned_cols=205 Identities=22% Similarity=0.287 Sum_probs=170.7
Q ss_pred CCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEcc
Q 043136 127 KLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLA 206 (902)
Q Consensus 127 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 206 (902)
+.+++++++|.++. +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 35556666666653 444433 456667777777766666677778888888888888876666667888889999999
Q ss_pred CCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceec
Q 043136 207 GNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEI 286 (902)
Q Consensus 207 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 286 (902)
+|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99988776777888999999999999999888888999999999999999999877778999999999999999999887
Q ss_pred CCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccC
Q 043136 287 PVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEI 334 (902)
Q Consensus 287 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 334 (902)
+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+...-
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 778999999999999999999877778999999999999999987654
No 210
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.93 E-value=5.6e-26 Score=247.70 Aligned_cols=177 Identities=30% Similarity=0.466 Sum_probs=147.1
Q ss_pred hccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCe
Q 043136 711 LSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNREC 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~ 783 (902)
.|...+.||+|+||.||+|+. .+++.||+|++..... ....+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 456778999999999999974 3468899999864432 34456788999999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhccC-------------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKG-------------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL 850 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl 850 (902)
.++||||+++|+|.+++...... ....+++..++.++.|+++||+|||+++ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 99999999999999999765421 1234788899999999999999999776 9999999999999
Q ss_pred cCCCCEEEeecccceeccCCCCc---eeeccccCccccCcccccc
Q 043136 851 DGEMEARVADFGVAKLIQSDESM---SVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 851 ~~~~~~kl~DFGla~~~~~~~~~---~~~~Gt~~y~APE~~~~~~ 892 (902)
+.++.+||+|||+++........ ....||+.|+|||++.+..
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 223 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCC
Confidence 99999999999999877544332 2345788999999886543
No 211
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.93 E-value=4.4e-26 Score=249.74 Aligned_cols=174 Identities=25% Similarity=0.382 Sum_probs=141.0
Q ss_pred HHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchh-----hHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec
Q 043136 707 VLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKE-----NIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN 780 (902)
Q Consensus 707 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~ 780 (902)
.....|.+.+.||+|+||.||+|... +++.||||++...... .......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34556788899999999999999764 5889999998643221 11223457889999999999999999999976
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC---EE
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME---AR 857 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~---~k 857 (902)
.+ .|+||||+++++|.+++.... .+++.....++.|++.||+|||+++ |+||||||+||+++.++. +|
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEE
T ss_pred Cc-eEEEEecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEE
Confidence 65 899999999999999886432 4678888899999999999999776 999999999999987654 99
Q ss_pred EeecccceeccCCCCceeeccccCccccCccc
Q 043136 858 VADFGVAKLIQSDESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 858 l~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~ 889 (902)
|+|||+++............||+.|+|||++.
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 158 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp ECCCTTCEECCCCHHHHHHHSCCTTCCHHHHH
T ss_pred EccCccceecccccccccccCCcCccCchhhc
Confidence 99999998875544445567999999999974
No 212
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.93 E-value=2.2e-26 Score=257.85 Aligned_cols=173 Identities=17% Similarity=0.195 Sum_probs=138.0
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHH---HHHhcCCcCeeEeEE-------eEEec
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEV---DVLGNVRHRNIVRLL-------GCCSN 780 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei---~il~~l~h~nIv~l~-------~~~~~ 780 (902)
|...+.||+|+||.||+|++ .+++.||||++...........+.+.+|+ +++++++|||||+++ +++.+
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 45568999999999999986 56899999998654333334556788999 455566899999998 66665
Q ss_pred CCe-----------------eEEEEEccCCCCHHHHHHhhccCC--CcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEc
Q 043136 781 REC-----------------TMLLYEYMPNGNLDDLLHAKNKGE--NLVADWVTRYKIALGVAQGICYLHHDCDPVIVHR 841 (902)
Q Consensus 781 ~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHr 841 (902)
.+. .|+||||+ +|+|.+++....... ...+++..++.|+.||+.||+|||+++ |+||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHr 230 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHT 230 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECS
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 532 78999999 689999998654321 123446778889999999999999776 9999
Q ss_pred CCCCCCEEEcCCCCEEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 842 DLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 842 DlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
||||+|||++.++.+||+|||+|+... ......+| +.|+|||++.+.
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~ 277 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARR 277 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC--CcccCCCC-cCccChhhhccc
Confidence 999999999999999999999998643 23455678 999999999876
No 213
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.93 E-value=8.3e-26 Score=254.03 Aligned_cols=169 Identities=22% Similarity=0.312 Sum_probs=140.7
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC--cCeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR--HRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~--h~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++...+..|+||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3666789999999999999888899999999854432 3345677899999999996 599999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
| +.+++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++ ++.+||+|||+|+.+.
T Consensus 136 E-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 55889999997643 3677788899999999999999665 99999999999995 5899999999998765
Q ss_pred CCCC---ceeeccccCccccCcccc
Q 043136 869 SDES---MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 869 ~~~~---~~~~~Gt~~y~APE~~~~ 890 (902)
.... ....+||+.|||||++.+
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHC
T ss_pred CCCccccCCCCCcCCCccChHHhhh
Confidence 4322 245679999999999976
No 214
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=3.8e-25 Score=233.03 Aligned_cols=192 Identities=21% Similarity=0.268 Sum_probs=144.1
Q ss_pred CCCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 64 VWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 64 ~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
+||.|.|++|.. ..+.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 388999999964 3456899999998 5676655 688999999999998888888888999999999988888777
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQ 223 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 223 (902)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 77788888888888888777776677777777777777777777666666677777777777777777555556666667
Q ss_pred CcEEEeeCcccCCCCChhccCCCCCCEEEccCccCccc
Q 043136 224 LERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGT 261 (902)
Q Consensus 224 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 261 (902)
|++|+|++|+|++..+..|..+++|++|+|++|.+++.
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 77777777776666666666666666666666666543
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.93 E-value=2.7e-25 Score=240.47 Aligned_cols=172 Identities=32% Similarity=0.438 Sum_probs=148.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccc------hhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCC
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKH------KENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRE 782 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~------~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~ 782 (902)
.|...+.||+|+||.||+|... +++.||+|++.... .......+.+.+|+++++++. ||||+++++++...+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4566789999999999999764 68999999985432 122334567889999999995 999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecc
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFG 862 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 862 (902)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999997643 3678888999999999999999776 9999999999999999999999999
Q ss_pred cceeccCCCCceeeccccCccccCcccc
Q 043136 863 VAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 863 la~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
.++............||+.|+|||++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 197 (298)
T 1phk_A 170 FSCQLDPGEKLREVCGTPSYLAPEIIEC 197 (298)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred chhhcCCCcccccccCCccccCHHHhcc
Confidence 9998766665666789999999999863
No 216
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.93 E-value=1.3e-25 Score=257.37 Aligned_cols=167 Identities=29% Similarity=0.401 Sum_probs=138.9
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC-eeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE-CTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~-~~~lv~e~ 790 (902)
+...+.||+|+||.||+|+.. ++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..|+||||
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 455689999999999999874 7899999985432 2356889999999999999999999987655 78999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CTTCBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999986532 23577888999999999999999776 999999999999999999999999999865332
Q ss_pred CCceeeccccCccccCcccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.....+++.|+|||++.+..
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~ 362 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKK 362 (450)
T ss_dssp ------CCCTTTSCHHHHHSSC
T ss_pred --ccCCCCCcceeCHHHhcCCC
Confidence 22346789999999987643
No 217
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.1e-25 Score=249.02 Aligned_cols=177 Identities=29% Similarity=0.407 Sum_probs=143.6
Q ss_pred HhccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~ 782 (902)
..|...+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3456778999999999999975 246789999986432 223456788999999999 8999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHHhhccC------------------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCC
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKG------------------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLK 844 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlK 844 (902)
..|+||||+++|+|.+++...... ....+++..++.++.|+++||+|||+++ |+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 999999999999999999764321 0123688889999999999999999776 9999999
Q ss_pred CCCEEEcCCCCEEEeecccceeccCCCCc---eeeccccCccccCccccc
Q 043136 845 PSNILLDGEMEARVADFGVAKLIQSDESM---SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 845 p~NILl~~~~~~kl~DFGla~~~~~~~~~---~~~~Gt~~y~APE~~~~~ 891 (902)
|+||+++.++.+||+|||+++........ ....||+.|+|||++.+.
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 249 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG 249 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccC
Confidence 99999999999999999999877544332 235678899999998654
No 218
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.93 E-value=6.9e-26 Score=250.48 Aligned_cols=169 Identities=22% Similarity=0.317 Sum_probs=139.8
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc--CeeEeEEeEEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH--RNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--~nIv~l~~~~~~~~~~~lv~ 788 (902)
.|.+.+.||+|+||.||+|...+++.||||++.... ......+.+.+|++++++++| |||+++++++.+.+..|+||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 456678999999999999988889999999985433 233455778899999999976 99999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|+ .+++|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++ ++.+||+|||+|+...
T Consensus 89 e~-~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp CC-CSEEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred eC-CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 95 5889999997643 3677888999999999999999776 99999999999997 6789999999998765
Q ss_pred CCCC---ceeeccccCccccCcccc
Q 043136 869 SDES---MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 869 ~~~~---~~~~~Gt~~y~APE~~~~ 890 (902)
.... ....+||+.|+|||++.+
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~ 183 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKD 183 (343)
T ss_dssp -----------CCCCSSCCHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhh
Confidence 4332 235679999999999865
No 219
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.92 E-value=3.6e-25 Score=238.59 Aligned_cols=173 Identities=26% Similarity=0.390 Sum_probs=143.1
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec----CCeeEE
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN----RECTML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~----~~~~~l 786 (902)
+.+.+.||+|+||.||+|.+ .++..||+|++..... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 45667899999999999976 4678899999854332 33456778899999999999999999999865 456899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCCEEEeecccce
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-GEMEARVADFGVAK 865 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-~~~~~kl~DFGla~ 865 (902)
||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ .+|+||||||+||+++ .++.+||+|||+++
T Consensus 107 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999997643 3677888999999999999999542 2499999999999997 78999999999997
Q ss_pred eccCCCCceeeccccCccccCcccccc
Q 043136 866 LIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.... .......||+.|+|||++.+.+
T Consensus 181 ~~~~-~~~~~~~~t~~y~aPE~~~~~~ 206 (290)
T 1t4h_A 181 LKRA-SFAKAVIGTPEFMAPEMYEEKY 206 (290)
T ss_dssp GCCT-TSBEESCSSCCCCCGGGGGTCC
T ss_pred cccc-cccccccCCcCcCCHHHHhccC
Confidence 5433 3345567999999999987643
No 220
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.92 E-value=1.9e-25 Score=245.17 Aligned_cols=171 Identities=28% Similarity=0.392 Sum_probs=143.8
Q ss_pred hccCCcEeeecCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe--cCCe
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-----PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS--NREC 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~--~~~~ 783 (902)
.|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++. +...
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 456678999999999999973 468899999985442 334566889999999999999999999886 4567
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEccccc
Confidence 8999999999999999976432 4788899999999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCC----ceeeccccCccccCccccc
Q 043136 864 AKLIQSDES----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~~~----~~~~~Gt~~y~APE~~~~~ 891 (902)
++....... .....||+.|+|||++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 205 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHC
T ss_pred ceecccCCccceeeccCCccccccCHHHhccC
Confidence 987754332 2234588889999998654
No 221
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.92 E-value=1.1e-25 Score=241.33 Aligned_cols=173 Identities=20% Similarity=0.300 Sum_probs=132.5
Q ss_pred HhccCCcEeeecCceEEEEEEeCC----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPG----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
..|...+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++. .+..|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 356677899999999999997643 4579999875432 2345667889999999999999999999984 56789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccc
Confidence 9999999999999997543 24778889999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC--ceeeccccCccccCcccccc
Q 043136 866 LIQSDES--MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~--~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....||+.|+|||++.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 193 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRR 193 (281)
T ss_dssp --------------CCGGGCCHHHHHHCC
T ss_pred ccCcccccccccCCCcccccChhhcccCC
Confidence 7654332 23345788999999986543
No 222
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.92 E-value=1.5e-25 Score=244.10 Aligned_cols=178 Identities=20% Similarity=0.332 Sum_probs=138.3
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 356678999999999999976 5789999999865444445566778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++..... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 113 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp CCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred cCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 9999999999875432 2234778888999999999999999776 99999999999999999999999999987643
Q ss_pred CC-CceeeccccCccccCcccccc
Q 043136 870 DE-SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 870 ~~-~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.. ......||+.|+|||++.+..
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~ 212 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENG 212 (310)
T ss_dssp ----------CCSSCCHHHHTTCC
T ss_pred CCccccccCCCeeEeChHHhCCCC
Confidence 32 234467999999999987653
No 223
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2e-26 Score=255.82 Aligned_cols=173 Identities=24% Similarity=0.258 Sum_probs=143.5
Q ss_pred hccCCcEeeecCceEEEEEEe----CCCcEEEEEEecccchh-hHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCee
Q 043136 711 LSMSDKILGMGSTGTVYKAEM----PGGEIIAVKKLWGKHKE-NIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~i~~~~~~-~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~ 784 (902)
.|...+.||+|+||.||+|+. .+++.||||++.+.... .....+.+.+|+++++++ +||||+++++++...+..
T Consensus 55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 134 (355)
T 1vzo_A 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL 134 (355)
T ss_dssp GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceE
Confidence 355678999999999999976 36899999998643210 111223456799999999 699999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||+++|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 135 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 135 HLILDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEeecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 99999999999999997653 3677888899999999999999776 999999999999999999999999999
Q ss_pred eeccCCC--CceeeccccCccccCccccc
Q 043136 865 KLIQSDE--SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 865 ~~~~~~~--~~~~~~Gt~~y~APE~~~~~ 891 (902)
+.+.... .....+||+.|+|||++.+.
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 235 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGG 235 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCC
Confidence 8764322 23446899999999999763
No 224
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.92 E-value=1.2e-25 Score=247.63 Aligned_cols=177 Identities=25% Similarity=0.372 Sum_probs=145.2
Q ss_pred HhccCCcEeeecCceEEEEEEeC--------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEec
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP--------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSN 780 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~ 780 (902)
..|...+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 35667789999999999999763 46789999985433 234556788999999999 89999999999999
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccC-----------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEE
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKG-----------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNIL 849 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NIL 849 (902)
.+..|+||||+++|+|.+++...... ....+++..++.++.|+++||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 99999999999999999999865421 1224788889999999999999999776 999999999999
Q ss_pred EcCCCCEEEeecccceeccCCCC---ceeeccccCccccCccccc
Q 043136 850 LDGEMEARVADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 850 l~~~~~~kl~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~ 891 (902)
++.++.+||+|||+++....... .....||+.|+|||++.+.
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 234 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHC
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCC
Confidence 99999999999999987654332 2234578899999998654
No 225
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.92 E-value=6e-26 Score=260.67 Aligned_cols=169 Identities=25% Similarity=0.433 Sum_probs=141.4
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
+...+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++. .+..|+||||+
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred eEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 445689999999999999988889999999864332 2456889999999999999999999986 56789999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCC
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE 871 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 871 (902)
++|+|.++++.... ...++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 265 ~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp TTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 99999999975432 13567788899999999999999776 9999999999999999999999999998764321
Q ss_pred --CceeeccccCccccCccccc
Q 043136 872 --SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 872 --~~~~~~Gt~~y~APE~~~~~ 891 (902)
......+|+.|+|||++.+.
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~ 360 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFG 360 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHC
T ss_pred eeccCCCcccccccCHHHhccC
Confidence 12234567899999998654
No 226
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=8.1e-27 Score=259.89 Aligned_cols=257 Identities=20% Similarity=0.214 Sum_probs=190.7
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCc----hhhhccC-CCcEEEccCCCCCCCCCcccccc-----cc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQ----PAILELT-KLRTIDISHNSFNSTFPPGISKL-----RF 151 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 151 (902)
.++|+.|+++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788999999988888888889999999999998777 7778888 89999999999988877777775 88
Q ss_pred cceeccccccccCCCchhhhcc-----cCCcEEeccCccCcCCCCccc----CC-CCCCCEEEccCCCccCCCC----cc
Q 043136 152 LRIFNAYSNSFTGPLPLEFVQL-----NSLQQLNLGGSYFDGEIPSDY----RN-LSSLRFLDLAGNSLTGSLP----PQ 217 (902)
Q Consensus 152 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p----~~ 217 (902)
|++|+|++|.+++..+..++.. ++|++|+|++|++++..+..+ .. .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999988887766554 789999999999887665543 33 2588899999988885333 33
Q ss_pred ccCCC-CCcEEEeeCcccCCCCChhcc----CC-CCCCEEEccCccCccc----CCccccC-CCCccEEecCCCccceec
Q 043136 218 LGLLT-QLERIEIGYNNLQGEVPVEFA----SL-VNLKYMDISACNLSGT----LPSEISN-LTKLEMLLLFKNHFTGEI 286 (902)
Q Consensus 218 ~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~ 286 (902)
+..++ +|++|+|++|+|++..+..+. .+ ++|++|||++|.+++. ++..+.. .++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 44554 888888888888877665444 34 5888888888888752 3444544 347888888888887543
Q ss_pred C----CCCCCcCcCcEEecccCCCccc-------cCccccccCCCCEEEccCccccccCChhh
Q 043136 287 P----VSYGNLQALQVLDLSDNQLSGP-------IPASLASLKGLTRLSLMNNVLFGEIPQDI 338 (902)
Q Consensus 287 p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 338 (902)
+ ..+..+++|++|+|++|.+.+. ++..+..+++|++||+++|.+.+..+..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 3 3346677788888888874432 23355666777777777777766544443
No 227
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.92 E-value=9.3e-26 Score=251.59 Aligned_cols=175 Identities=15% Similarity=0.197 Sum_probs=139.1
Q ss_pred hccCCcEeeecCceEEEEEEeCC------CcEEEEEEecccchhhHHH--------HHHHHHHHHHHhcCCcCeeEeEEe
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPG------GEIIAVKKLWGKHKENIRR--------RRGVLAEVDVLGNVRHRNIVRLLG 776 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~i~~~~~~~~~~--------~~~~~~Ei~il~~l~h~nIv~l~~ 776 (902)
.|.+.+.||+|+||.||+|.+.. ++.||||++.........+ ......|+..+..++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 56677899999999999997754 4789999986543221111 123455777888899999999999
Q ss_pred EEecC----CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-
Q 043136 777 CCSNR----ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD- 851 (902)
Q Consensus 777 ~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~- 851 (902)
++... ...|+||||+ +++|.+++.... ..+++..+..|+.||+.||+|||+++ |+||||||+||+++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 98764 4589999999 999999997642 24788999999999999999999776 99999999999998
Q ss_pred -CCCCEEEeecccceeccCCCC--------ceeeccccCccccCccccccc
Q 043136 852 -GEMEARVADFGVAKLIQSDES--------MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 852 -~~~~~kl~DFGla~~~~~~~~--------~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.++.+||+|||+|+.+..... ....+||+.|||||++.+...
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 238 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAP 238 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCC
Confidence 889999999999987643211 134569999999999977643
No 228
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.92 E-value=3.9e-26 Score=246.00 Aligned_cols=168 Identities=18% Similarity=0.345 Sum_probs=141.5
Q ss_pred HhccCCcEeeecCceEEEEEEeCC-C-------cEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPG-G-------EIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR 781 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~-~-------~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~ 781 (902)
..|.+.+.||+|+||.||+|.... + ..||+|++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR---NYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG---GGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 345677899999999999996543 3 5799999854332 2345688999999999999999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC------
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME------ 855 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~------ 855 (902)
+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKN----CINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCccccccc
Confidence 999999999999999999976432 3678888999999999999999776 999999999999998887
Q ss_pred --EEEeecccceeccCCCCceeeccccCccccCcccc
Q 043136 856 --ARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 856 --~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
+||+|||.++.... .....||+.|+|||++.+
T Consensus 158 ~~~kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~ 191 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP---KDILQERIPWVPPECIEN 191 (289)
T ss_dssp CEEEECCCCSCTTTSC---HHHHHHTTTTSCHHHHHC
T ss_pred ceeeeccCcccccccC---ccccCCcCcccCHHHhCC
Confidence 99999999875432 234568999999999976
No 229
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=1.4e-26 Score=255.39 Aligned_cols=267 Identities=18% Similarity=0.224 Sum_probs=157.1
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCc
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPP 144 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 144 (902)
|.+|.++.|++. .++.++++++.+. +..+..+ ..++++.|++++|.+.+..+.
T Consensus 36 c~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~----------------------~~~~l~~L~l~~n~l~~~~~~ 88 (336)
T 2ast_B 36 CKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRL----------------------LSQGVIAFRCPRSFMDQPLAE 88 (336)
T ss_dssp CHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHH----------------------HHTTCSEEECTTCEECSCCCS
T ss_pred HHHHHHHhcCch--hheeeccccccCC---HHHHHhh----------------------hhccceEEEcCCccccccchh
Confidence 668999988643 4556666655544 2333333 004445555555544444333
Q ss_pred ccccccccceeccccccccCC-CchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCC-CccCC-CCccccCC
Q 043136 145 GISKLRFLRIFNAYSNSFTGP-LPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGN-SLTGS-LPPQLGLL 221 (902)
Q Consensus 145 ~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l 221 (902)
+..+++|++|++++|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+
T Consensus 89 -~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~ 167 (336)
T 2ast_B 89 -HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 167 (336)
T ss_dssp -CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHC
T ss_pred -hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcC
Confidence 33455555555555555443 5555666666666666666666555556666666666666666 45532 44555666
Q ss_pred CCCcEEEeeCc-ccCCC-CChhccCCC-CCCEEEccCc--cCc-ccCCccccCCCCccEEecCCCc-cceecCCCCCCcC
Q 043136 222 TQLERIEIGYN-NLQGE-VPVEFASLV-NLKYMDISAC--NLS-GTLPSEISNLTKLEMLLLFKNH-FTGEIPVSYGNLQ 294 (902)
Q Consensus 222 ~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~ 294 (902)
++|++|++++| ++++. ++..+..++ +|++|+|++| .++ +.+|..+.++++|++|++++|. +++..+..+..++
T Consensus 168 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 168 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC
Confidence 66677777666 66643 455566677 7777777777 444 3455566667777777777777 5555666677777
Q ss_pred cCcEEecccCC-CccccCccccccCCCCEEEccCccccccCChhhhhcc-ccceEEecCceeccccCcccc
Q 043136 295 ALQVLDLSDNQ-LSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLA-DLDTLLLWNNHLTGVLPQKLG 363 (902)
Q Consensus 295 ~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~ 363 (902)
+|++|++++|. +.......+..+++|+.|++++| +. ...+..+. .+..|++++|++++..|..++
T Consensus 248 ~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 248 YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 77777777774 22222225667777777777777 32 12333332 355666666666666555544
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.92 E-value=1.1e-25 Score=252.92 Aligned_cols=170 Identities=24% Similarity=0.313 Sum_probs=139.5
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec--------
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-------- 780 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-------- 780 (902)
..|...+.||+|+||.||+|++ .+++.||||++...... ..+|+++++.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3566779999999999999975 57899999998543222 2369999999999999999999843
Q ss_pred ------------------------------CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHH
Q 043136 781 ------------------------------RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYL 830 (902)
Q Consensus 781 ------------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~L 830 (902)
....++||||++ |+|.+.+..... ....+++..+..++.|+++||+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334889999997 588888765322 223577888999999999999999
Q ss_pred HhCCCCCeEEcCCCCCCEEEc-CCCCEEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 831 HHDCDPVIVHRDLKPSNILLD-GEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 831 H~~~~~~ivHrDlKp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+++ |+||||||+||+++ .++.+||+|||+|+............||+.|+|||++.+.
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 216 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGA 216 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTC
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCC
Confidence 9665 99999999999997 6889999999999987666666677899999999998764
No 231
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.92 E-value=7.1e-26 Score=243.98 Aligned_cols=173 Identities=24% Similarity=0.332 Sum_probs=130.1
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+. .+++.||+|++..... .....+.+..+...++.++||||+++++++.+.+..++|||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 456678999999999999976 5789999999854322 22333444455556788899999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|++ |++.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 87 LMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp CCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred hhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 996 588888765322 223578889999999999999999976 6 9999999999999999999999999998876
Q ss_pred CCCCceeeccccCccccCccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~ 889 (902)
.........||+.|+|||++.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~ 182 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERIN 182 (290)
T ss_dssp --------CCCCCCSCHHHHS
T ss_pred ccccccccCCCccccChhhcC
Confidence 655555668999999999974
No 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.92 E-value=8e-26 Score=251.81 Aligned_cols=173 Identities=26% Similarity=0.372 Sum_probs=145.7
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
...|...+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 345666789999999999999765 68999999986442 234456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
|||+++++|.+++.... ..++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 181 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181 (360)
T ss_dssp ECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred EECCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence 99999999999997653 367788889999999999999974 5 99999999999999999999999999976
Q ss_pred ccCCCCceeeccccCccccCcccccc
Q 043136 867 IQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.... ......||+.|+|||++.+..
T Consensus 182 ~~~~-~~~~~~gt~~y~aPE~~~~~~ 206 (360)
T 3eqc_A 182 LIDS-MANSFVGTRSYMSPERLQGTH 206 (360)
T ss_dssp HHHH-C----CCCCTTCCHHHHTTCC
T ss_pred cccc-cccCCCCCCCeECHHHHcCCC
Confidence 5432 234468999999999997653
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.92 E-value=3.6e-25 Score=239.88 Aligned_cols=171 Identities=27% Similarity=0.455 Sum_probs=137.7
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec--------
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-------- 780 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-------- 780 (902)
..|...+.||+|+||.||+|+. .+++.||+|++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 3466778999999999999976 4789999999843 22345678899999999999999999998854
Q ss_pred -----CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC
Q 043136 781 -----RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME 855 (902)
Q Consensus 781 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~ 855 (902)
.+..|+||||+++|+|.+++.... ...++..++.++.|+++||+|||+++ |+||||||+||+++.++.
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCC
Confidence 356899999999999999997532 24667788899999999999999776 999999999999999999
Q ss_pred EEEeecccceeccCC---------------CCceeeccccCccccCccccc
Q 043136 856 ARVADFGVAKLIQSD---------------ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 856 ~kl~DFGla~~~~~~---------------~~~~~~~Gt~~y~APE~~~~~ 891 (902)
+||+|||+++..... .......||+.|+|||++.+.
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 205 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT 205 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSC
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC
Confidence 999999999876421 123446799999999998753
No 234
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.92 E-value=2.2e-25 Score=249.12 Aligned_cols=170 Identities=26% Similarity=0.310 Sum_probs=131.9
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC------e
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE------C 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~------~ 783 (902)
.|...+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+++++.++||||+++++++...+ .
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 355678999999999999976 468899999986432 23345567889999999999999999999997654 7
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||++ |++.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 105 ~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeec
Confidence 899999996 578888752 2677888899999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+...........+||+.|+|||++.+..
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 202 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMG 202 (371)
T ss_dssp ----------------CTTCCHHHHTTCC
T ss_pred ccccccccccCCceecCCccCHHHhcCCC
Confidence 98776554455678999999999997753
No 235
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.92 E-value=3.3e-25 Score=240.61 Aligned_cols=172 Identities=27% Similarity=0.400 Sum_probs=144.2
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
...|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 456778899999999999999764 689999999854322 2335678999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVA 864 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla 864 (902)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILERG-----VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 99999999999987643 3677888999999999999999776 9999999999999 77889999999999
Q ss_pred eeccCCCCceeeccccCccccCcccccc
Q 043136 865 KLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 865 ~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+..... ......||+.|+|||++.+..
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~ 183 (304)
T 2jam_A 157 KMEQNG-IMSTACGTPGYVAPEVLAQKP 183 (304)
T ss_dssp CCCCCB-TTHHHHSCCCBCCTTTBSSCS
T ss_pred eecCCC-ccccccCCCCccChHHhccCC
Confidence 765332 334467999999999997653
No 236
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.92 E-value=1.8e-25 Score=238.05 Aligned_cols=174 Identities=26% Similarity=0.351 Sum_probs=144.7
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC--CeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR--ECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~--~~~~lv~ 788 (902)
.|...+.||+|+||.||+|++ +++.||+|++.... ......+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 345668999999999999988 48889999986543 2334456789999999999999999999999877 7889999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999997542 224788899999999999999999542 339999999999999999999999999876533
Q ss_pred CCCCceeeccccCccccCcccccccC
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFCFSV 894 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~~~~ 894 (902)
. ....||+.|+|||++.+....
T Consensus 165 ~----~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 165 S----PGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp C----TTCBSCGGGSCHHHHHSCGGG
T ss_pred c----cCccCCccccChhhhccCCCC
Confidence 2 235789999999999875443
No 237
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.92 E-value=1.1e-25 Score=247.47 Aligned_cols=172 Identities=24% Similarity=0.336 Sum_probs=134.6
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|...+.||+|+||.||+|.+ .+++.||||++..... .....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 3567778999999999999975 4689999999854432 2334556779999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-----CCCCEEEeeccc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-----GEMEARVADFGV 863 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-----~~~~~kl~DFGl 863 (902)
||++ |+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||+
T Consensus 113 e~~~-~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp ECCS-EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred ecCC-CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9997 59999987543 3678888999999999999999776 99999999999994 455699999999
Q ss_pred ceeccCC-CCceeeccccCccccCccccc
Q 043136 864 AKLIQSD-ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~-~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+..... ......+||+.|+|||++.+.
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 212 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGS 212 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTC
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCC
Confidence 9876432 233456789999999999763
No 238
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.92 E-value=4e-25 Score=236.23 Aligned_cols=172 Identities=26% Similarity=0.343 Sum_probs=145.7
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|.+.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 34667789999999999999765 6899999998543322 23466889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||.++...
T Consensus 85 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 85 EYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp ECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999887543 24778888999999999999999776 9999999999999999999999999998764
Q ss_pred CCC---CceeeccccCccccCccccc
Q 043136 869 SDE---SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 869 ~~~---~~~~~~Gt~~y~APE~~~~~ 891 (902)
... ......||+.|+|||++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~ 182 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRR 182 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCS
T ss_pred CCcchhcccCCccccCccChHHHhcC
Confidence 322 23456799999999999764
No 239
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.92 E-value=4.5e-26 Score=264.28 Aligned_cols=170 Identities=27% Similarity=0.416 Sum_probs=143.2
Q ss_pred ccCCcEeeecCceEEEEEEeCC-CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPG-GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
+...+.||+|+||.||+|.+.. +..||||++..... ..+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4556889999999999997754 88999999854332 245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++|+|.++++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 298 ~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 298 MTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred cCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999976432 24778888999999999999999776 999999999999999999999999999876443
Q ss_pred CC--ceeeccccCccccCccccc
Q 043136 871 ES--MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~--~~~~~Gt~~y~APE~~~~~ 891 (902)
.. .....+++.|+|||++.+.
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~ 394 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYN 394 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHC
T ss_pred ceeecCCCcCCcceeCHhHHhcC
Confidence 22 1223467889999998654
No 240
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=244.02 Aligned_cols=175 Identities=24% Similarity=0.304 Sum_probs=142.0
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe----cCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS----NRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~----~~~~~~ 785 (902)
.|.+.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++. .....|
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 456678999999999999976 57899999988543 2345567889999999999999999999986 345789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++..... ....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.++
T Consensus 107 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 99999999999999976432 2235788899999999999999999776 9999999999999999999999999987
Q ss_pred eccCCCC----------ceeeccccCccccCcccccc
Q 043136 866 LIQSDES----------MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~----------~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....||+.|+|||++.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 219 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCS
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCC
Confidence 6532110 12345799999999987643
No 241
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.92 E-value=1.5e-25 Score=252.46 Aligned_cols=169 Identities=25% Similarity=0.341 Sum_probs=136.9
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC------ee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE------CT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~------~~ 784 (902)
.|...+.||+|+||.||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+ ..
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 45667899999999999999877777999998543322 236999999999999999999985433 37
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCCEEEeeccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-GEMEARVADFGV 863 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-~~~~~kl~DFGl 863 (902)
++||||+++ ++.+.+..... ....+++..+..++.|+++||+|||+++ |+||||||+||+++ .++.+||+|||+
T Consensus 114 ~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 114 NLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 899999976 44444432221 1224778888899999999999999776 99999999999999 789999999999
Q ss_pred ceeccCCCCceeeccccCccccCccccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+...........+||+.|+|||++.+.
T Consensus 189 a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 216 (394)
T 4e7w_A 189 AKILIAGEPNVSYICSRYYRAPELIFGA 216 (394)
T ss_dssp CEECCTTCCCCSSCSCGGGCCHHHHTTC
T ss_pred cccccCCCCCcccccCcCccCHHHHcCC
Confidence 9987666666667899999999998653
No 242
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.92 E-value=9.6e-26 Score=247.24 Aligned_cols=169 Identities=25% Similarity=0.418 Sum_probs=134.3
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 556689999999999999765 6899999998533211 1222355799999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++ |+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CS-EEHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cc-cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 96 599998876432 4778888899999999999999776 999999999999999999999999999865432
Q ss_pred -CCceeeccccCccccCcccc
Q 043136 871 -ESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 871 -~~~~~~~Gt~~y~APE~~~~ 890 (902)
......+||+.|+|||++.+
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~ 174 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLG 174 (324)
T ss_dssp ---------CGGGCCHHHHTT
T ss_pred ccccccccCcccccChhhhcC
Confidence 23345678999999999876
No 243
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.92 E-value=4.8e-25 Score=243.58 Aligned_cols=174 Identities=26% Similarity=0.393 Sum_probs=146.8
Q ss_pred CCHHHHHHHhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhc--CCcCeeEeEEeEEe
Q 043136 702 FTADDVLECLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGN--VRHRNIVRLLGCCS 779 (902)
Q Consensus 702 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~--l~h~nIv~l~~~~~ 779 (902)
+...+.+...|...+.||+|+||.||+|+. +++.||||++.... .+.+.+|++++.. ++||||+++++++.
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 445566777888899999999999999987 58999999984322 2346678888876 78999999999998
Q ss_pred cCC----eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCC
Q 043136 780 NRE----CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLH--------HDCDPVIVHRDLKPSN 847 (902)
Q Consensus 780 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrDlKp~N 847 (902)
... ..|+||||+++|+|.+++... .+++..++.++.|+++||+||| +.+ |+||||||+|
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~N 177 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKN 177 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGG
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHH
Confidence 775 789999999999999999653 3778889999999999999999 554 9999999999
Q ss_pred EEEcCCCCEEEeecccceeccCCCC-----ceeeccccCccccCccccc
Q 043136 848 ILLDGEMEARVADFGVAKLIQSDES-----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 848 ILl~~~~~~kl~DFGla~~~~~~~~-----~~~~~Gt~~y~APE~~~~~ 891 (902)
|+++.++.+||+|||+++....... .....||+.|+|||++.+.
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 226 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence 9999999999999999987755432 2345799999999999765
No 244
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=1.6e-25 Score=238.20 Aligned_cols=171 Identities=25% Similarity=0.422 Sum_probs=144.2
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|...+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 35566899999999999999888899999998654322 24678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++..... ..++..++.++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhhCcc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999975432 4678888999999999999999776 999999999999999999999999999865322
Q ss_pred C--CceeeccccCccccCcccccc
Q 043136 871 E--SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~--~~~~~~Gt~~y~APE~~~~~~ 892 (902)
. ......||+.|+|||++.+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~ 181 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSR 181 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCC
T ss_pred cccccccccccccccChhhhcCCC
Confidence 1 122345788999999986543
No 245
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.92 E-value=1.6e-25 Score=245.25 Aligned_cols=178 Identities=24% Similarity=0.346 Sum_probs=146.3
Q ss_pred HhccCCcEeeecCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC 783 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~ 783 (902)
..|...+.||+|+||.||+|.+. +++.||+|++.... .......+.+|++++++++||||+++++++.+.+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 45667799999999999999654 36789999986433 23445678899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEE
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNK-----GENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARV 858 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl 858 (902)
.++||||+++|+|.+++...+. ......++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEE
Confidence 9999999999999999976432 11124578888999999999999999776 999999999999999999999
Q ss_pred eecccceeccCCCC---ceeeccccCccccCcccccc
Q 043136 859 ADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 859 ~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~ 892 (902)
+|||+++....... .....||+.|+|||++.+..
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 216 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV 216 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCC
Confidence 99999987643322 12345788999999987543
No 246
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.7e-25 Score=249.47 Aligned_cols=167 Identities=26% Similarity=0.387 Sum_probs=135.6
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC------e
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE------C 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~------~ 783 (902)
.|...+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+++++.++||||+++++++...+ .
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 355668899999999999976 468999999985432 23345567889999999999999999999997653 4
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||+ +++|.+++... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeec
Confidence 69999999 88999998752 3677888899999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+.... .....+||+.|+|||++.+
T Consensus 175 a~~~~~--~~~~~~~t~~y~aPE~~~~ 199 (367)
T 1cm8_A 175 ARQADS--EMTGYVVTRWYRAPEVILN 199 (367)
T ss_dssp CEECCS--SCCSSCSCGGGCCTHHHHT
T ss_pred cccccc--ccCcCcCCCCcCCHHHHhC
Confidence 987643 2345689999999999876
No 247
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.92 E-value=3e-25 Score=238.78 Aligned_cols=171 Identities=32% Similarity=0.504 Sum_probs=139.8
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHH----HHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRR----RRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~----~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.|...+.||+|+||.||+|++ .+++.||+|++.......... .+.+.+|++++++++||||+++++++.+.. +
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~ 97 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--R 97 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--E
T ss_pred cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--e
Confidence 455678999999999999976 468999999986443322111 156889999999999999999999997655 6
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC-----EEEee
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME-----ARVAD 860 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~-----~kl~D 860 (902)
+||||+++|+|.+.+.... ..+++..++.++.|++.|++|||+++ .+|+||||||+||+++.++. +||+|
T Consensus 98 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred EEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 9999999999999886543 24788889999999999999999542 23999999999999988776 99999
Q ss_pred cccceeccCCCCceeeccccCccccCcccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
||+++.... ......||+.|+|||++.+
T Consensus 173 fg~~~~~~~--~~~~~~g~~~y~aPE~~~~ 200 (287)
T 4f0f_A 173 FGLSQQSVH--SVSGLLGNFQWMAPETIGA 200 (287)
T ss_dssp CTTCBCCSS--CEECCCCCCTTSCGGGSSC
T ss_pred CCccccccc--cccccCCCccccCchhhcc
Confidence 999985433 3455689999999999843
No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.92 E-value=3.1e-26 Score=248.41 Aligned_cols=166 Identities=28% Similarity=0.407 Sum_probs=127.8
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhc--CCcCeeEeEEeEEecCC----e
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGN--VRHRNIVRLLGCCSNRE----C 783 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~--l~h~nIv~l~~~~~~~~----~ 783 (902)
..|...+.||+|+||.||+|+. +++.||||++.... ...+.+|.+++.. ++||||+++++++.... .
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 3567789999999999999987 48899999984322 2345678888877 78999999999998766 7
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEcCCCCCCEEEcCCCC
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLH--------HDCDPVIVHRDLKPSNILLDGEME 855 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivHrDlKp~NILl~~~~~ 855 (902)
.++||||+++|+|.+++... .+++..++.++.|++.|++||| +.+ |+||||||+||+++.++.
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred eEEEEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCC
Confidence 89999999999999999653 2455667789999999999999 555 999999999999999999
Q ss_pred EEEeecccceeccCCCCc-----eeeccccCccccCccccc
Q 043136 856 ARVADFGVAKLIQSDESM-----SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 856 ~kl~DFGla~~~~~~~~~-----~~~~Gt~~y~APE~~~~~ 891 (902)
+||+|||+|+........ ...+||+.|+|||++.+.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCc
Confidence 999999999876543322 334799999999998765
No 249
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.4e-25 Score=248.23 Aligned_cols=174 Identities=31% Similarity=0.423 Sum_probs=138.8
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhh--HHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKEN--IRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~--~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
..|...+.||+|+||.||+|.+. +++.||+|++....... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 34667789999999999999774 58999999985432221 1123457789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++ ++.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 90 v~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999975 8888886532 23556677899999999999999776 99999999999999999999999999987
Q ss_pred ccCC-CCceeeccccCccccCccccc
Q 043136 867 IQSD-ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 867 ~~~~-~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.... ......+||+.|+|||++.+.
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~ 187 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGA 187 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred ccCCcccCCcccccccccCchHhhCC
Confidence 6433 234456899999999998653
No 250
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.92 E-value=1.5e-25 Score=242.50 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=143.1
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv 787 (902)
..|...+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+++++++ +|++++++++++.+....++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 4566778999999999999975 5789999998853322 23467899999999 799999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC-----EEEeecc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME-----ARVADFG 862 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~-----~kl~DFG 862 (902)
|||+ +++|.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++. +||+|||
T Consensus 85 ~e~~-~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EECC-CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEec-CCCHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9999 9999999976432 4788899999999999999999665 999999999999987776 9999999
Q ss_pred cceeccCCCC--------ceeeccccCccccCcccccc
Q 043136 863 VAKLIQSDES--------MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 863 la~~~~~~~~--------~~~~~Gt~~y~APE~~~~~~ 892 (902)
+++....... .....||+.|+|||++.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 194 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE 194 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCC
Confidence 9987754322 34567999999999987654
No 251
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.92 E-value=8e-26 Score=248.89 Aligned_cols=177 Identities=28% Similarity=0.437 Sum_probs=145.0
Q ss_pred HhccCCcEeeecCceEEEEEEeCC------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPG------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~ 782 (902)
..|...+.||+|+||.||+|.... .+.||+|++.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 345667899999999999997642 2479999985433 234456788999999999 8999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHHhhccC---------CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKG---------ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE 853 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~ 853 (902)
..|+||||+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence 999999999999999999764321 1224678889999999999999999776 9999999999999999
Q ss_pred CCEEEeecccceeccCCCCc---eeeccccCccccCccccc
Q 043136 854 MEARVADFGVAKLIQSDESM---SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 854 ~~~kl~DFGla~~~~~~~~~---~~~~Gt~~y~APE~~~~~ 891 (902)
+.+||+|||+++........ ....||+.|+|||++.+.
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 241 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC 241 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHC
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccC
Confidence 99999999999876543322 234578899999988654
No 252
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.92 E-value=2e-25 Score=243.80 Aligned_cols=165 Identities=26% Similarity=0.387 Sum_probs=134.9
Q ss_pred CcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEEccC
Q 043136 715 DKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYEYMP 792 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~ 792 (902)
++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++.++ +||||+++++++.+.+..|+||||++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR 94 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCC
Confidence 57899999999999975 46899999998544322 245678899999885 79999999999999999999999999
Q ss_pred CCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC---EEEeecccceeccC
Q 043136 793 NGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME---ARVADFGVAKLIQS 869 (902)
Q Consensus 793 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~---~kl~DFGla~~~~~ 869 (902)
+|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++. +||+|||+++....
T Consensus 95 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 95 GGSILSHIHKRR-----HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred CCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999997653 3677888899999999999999776 999999999999988776 99999999986532
Q ss_pred CC--------CceeeccccCccccCcccc
Q 043136 870 DE--------SMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 870 ~~--------~~~~~~Gt~~y~APE~~~~ 890 (902)
.. .....+||+.|+|||++.+
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 195 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEA 195 (316)
T ss_dssp ---------------CCSGGGCCHHHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhc
Confidence 11 1234569999999999864
No 253
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.92 E-value=6.2e-26 Score=244.28 Aligned_cols=173 Identities=27% Similarity=0.394 Sum_probs=145.8
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLY 788 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~ 788 (902)
..|...+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST----HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34566789999999999999775 488899999854322 3456889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
||+++++|.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||.++...
T Consensus 89 e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp ECCTTEEHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EcCCCCcHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999976432 34778888999999999999999776 9999999999999999999999999998765
Q ss_pred CCCCc--eeeccccCccccCcccccc
Q 043136 869 SDESM--SVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 869 ~~~~~--~~~~Gt~~y~APE~~~~~~ 892 (902)
..... ....||+.|+|||++.+..
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~ 188 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNK 188 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCC
T ss_pred CCccccccCCccccCcCChhhhccCC
Confidence 43322 2345788999999986543
No 254
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.92 E-value=3.2e-25 Score=240.01 Aligned_cols=172 Identities=26% Similarity=0.384 Sum_probs=139.1
Q ss_pred ccCCcEeeecCceEEEEEEeCC----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe-cCCeeEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMPG----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS-NRECTML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~-~~~~~~l 786 (902)
|.+.+.||+|+||.||+|...+ ...+|+|++.... .....+.+.+|++++++++||||+++++++. .++..++
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 4566899999999999997532 2358999885432 3345567889999999999999999999864 5567899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++|+|.+++.... ...++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 105 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999997532 24677888999999999999999776 99999999999999999999999999987
Q ss_pred ccCCC-----CceeeccccCccccCcccccc
Q 043136 867 IQSDE-----SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~-----~~~~~~Gt~~y~APE~~~~~~ 892 (902)
..... ......||+.|+|||++.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 208 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCC
Confidence 64322 223456788999999986654
No 255
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.5e-24 Score=233.27 Aligned_cols=161 Identities=26% Similarity=0.253 Sum_probs=86.4
Q ss_pred chhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCC
Q 043136 167 PLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLV 246 (902)
Q Consensus 167 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 246 (902)
|..|..+++|++|+|++|.+++..+ . +.+++|++|+|++|+++ .+|..+..+++|++|++++|+|++..|..|..++
T Consensus 48 ~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~ 124 (290)
T 1p9a_G 48 LATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG 124 (290)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT
T ss_pred HHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC
Confidence 3334444444444444444432211 1 34455555555555554 3444555555555555555555554455555555
Q ss_pred CCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEcc
Q 043136 247 NLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLM 326 (902)
Q Consensus 247 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 326 (902)
+|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+.+|+.|+|+
T Consensus 125 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~ 203 (290)
T 1p9a_G 125 ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLH 203 (290)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECC
T ss_pred CCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeC
Confidence 5555555555555544455555566666666666665444444555666666666666665 455555555666666666
Q ss_pred Ccccc
Q 043136 327 NNVLF 331 (902)
Q Consensus 327 ~N~l~ 331 (902)
+|.+.
T Consensus 204 ~Np~~ 208 (290)
T 1p9a_G 204 GNPWL 208 (290)
T ss_dssp SCCBC
T ss_pred CCCcc
Confidence 66654
No 256
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.92 E-value=6.6e-25 Score=239.91 Aligned_cols=168 Identities=29% Similarity=0.462 Sum_probs=141.2
Q ss_pred cCCcEeeecCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC--CeeE
Q 043136 713 MSDKILGMGSTGTVYKAEM-----PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR--ECTM 785 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~--~~~~ 785 (902)
...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 6678999999999998854 258899999986442 234566788999999999999999999999874 6789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 112 lv~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccc
Confidence 999999999999998653 2678889999999999999999776 9999999999999999999999999999
Q ss_pred eccCCCC----ceeeccccCccccCccccc
Q 043136 866 LIQSDES----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 866 ~~~~~~~----~~~~~Gt~~y~APE~~~~~ 891 (902)
....... .....||+.|+|||++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 212 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEY 212 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHC
T ss_pred cccccccccccccCCCCCceeeChHHhcCC
Confidence 8755432 2335688899999998764
No 257
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.92 E-value=1.3e-25 Score=246.54 Aligned_cols=173 Identities=28% Similarity=0.416 Sum_probs=135.6
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCc----EEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGE----IIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.|...+.||+|+||.||+|++. +++ +||+|.+.... .....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 4556789999999999999753 344 35777764322 2234567889999999999999999999998755 78
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+|+||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+|+
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCccee
Confidence 99999999999999976432 4778888999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC---ceeeccccCccccCccccccc
Q 043136 866 LIQSDES---MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 866 ~~~~~~~---~~~~~Gt~~y~APE~~~~~~~ 893 (902)
....... .....||+.|+|||++.+...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 196 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIY 196 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCC
Confidence 7654332 233456889999999876543
No 258
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.92 E-value=7.7e-26 Score=259.48 Aligned_cols=169 Identities=28% Similarity=0.424 Sum_probs=137.0
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
+...+.||+|+||.||+|.+.++..||||++..... ..+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 455688999999999999988888899999864332 23568899999999999999999999876 6789999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCC
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE 871 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 871 (902)
++|+|.+++..... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 261 ~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 261 SKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp TTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred cCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 99999999975422 23678888999999999999999776 9999999999999999999999999998765332
Q ss_pred C--ceeeccccCccccCccccc
Q 043136 872 S--MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 872 ~--~~~~~Gt~~y~APE~~~~~ 891 (902)
. .....+|+.|+|||++.+.
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~ 356 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYG 356 (452)
T ss_dssp --------CCGGGSCHHHHHHC
T ss_pred eecccCCcccccccCHhHHhcC
Confidence 2 2334578899999998654
No 259
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=6.9e-25 Score=238.77 Aligned_cols=224 Identities=20% Similarity=0.218 Sum_probs=160.3
Q ss_pred CCCCEEEccCCCCcccCch---hhhccCCCcEEEccCCCCCCCCCccc--ccccccceeccccccccCCCc----hhhhc
Q 043136 102 TSLTHLNLSANAFDGPLQP---AILELTKLRTIDISHNSFNSTFPPGI--SKLRFLRIFNAYSNSFTGPLP----LEFVQ 172 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 172 (902)
..++.|.++++.++...-. .+..+++|++|+|++|++++..|..+ +.+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888887642111 23356779999999999999888888 889999999999999987655 44567
Q ss_pred ccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCC--C--CccccCCCCCcEEEeeCcccCCCCCh----hccC
Q 043136 173 LNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGS--L--PPQLGLLTQLERIEIGYNNLQGEVPV----EFAS 244 (902)
Q Consensus 173 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 244 (902)
+++|++|+|++|++.+..|..|+++++|++|+|++|++++. + +..++.+++|++|+|++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 88888888888888877778888888888888888887642 1 2234677778888888887763 222 2456
Q ss_pred CCCCCEEEccCccCcccCCccccCC---CCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCC
Q 043136 245 LVNLKYMDISACNLSGTLPSEISNL---TKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLT 321 (902)
Q Consensus 245 l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 321 (902)
+++|++|||++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 6777777777777776666666655 47777777777777 4555553 5677777777777643 32 45566666
Q ss_pred EEEccCcccc
Q 043136 322 RLSLMNNVLF 331 (902)
Q Consensus 322 ~L~L~~N~l~ 331 (902)
.|+|++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 7777766664
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.92 E-value=2.4e-25 Score=252.87 Aligned_cols=168 Identities=27% Similarity=0.384 Sum_probs=135.3
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC------Cee
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR------ECT 784 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~------~~~ 784 (902)
|...+.||+|+||.||+|++. +++.||||++..... ...+|++++++++||||+++++++... .+.
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 455688999999999999774 589999999854322 134699999999999999999988432 246
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-CCEEEeeccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE-MEARVADFGV 863 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~-~~~kl~DFGl 863 (902)
++||||+++ ++.+.+..... ....+++..++.++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred Eeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchh
Confidence 799999965 77776654322 2235788888999999999999999665 9999999999999965 5689999999
Q ss_pred ceeccCCCCceeeccccCccccCccccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+...........+||+.|+|||++.+.
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~ 231 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGA 231 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTC
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCC
Confidence 9987665555667899999999998653
No 261
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.92 E-value=2.9e-25 Score=244.78 Aligned_cols=169 Identities=27% Similarity=0.462 Sum_probs=131.4
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec-----CCeeEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-----RECTML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-----~~~~~l 786 (902)
|...+.||+|+||.||+|+. +++.||||++...... ......|+..+..++||||+++++++.. ....|+
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ----NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchh----hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 45668999999999999976 7899999998533211 1112234444556899999999986532 336789
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEcCCCCCCEEEcCCCCEEEee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC------DPVIVHRDLKPSNILLDGEMEARVAD 860 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~------~~~ivHrDlKp~NILl~~~~~~kl~D 860 (902)
||||+++|+|.+++.... .++..+..++.|+++||+|||+.. ..+|+||||||+||+++.++.+||+|
T Consensus 90 v~e~~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EECCCTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEecCCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 999999999999996542 467888899999999999999660 01599999999999999999999999
Q ss_pred cccceeccCCC---------CceeeccccCccccCccccc
Q 043136 861 FGVAKLIQSDE---------SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 861 FGla~~~~~~~---------~~~~~~Gt~~y~APE~~~~~ 891 (902)
||+|+.+.... .....+||+.|+|||++.+.
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 203 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGA 203 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCC
Confidence 99998764321 12245799999999999763
No 262
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.92 E-value=2.5e-25 Score=244.77 Aligned_cols=172 Identities=28% Similarity=0.438 Sum_probs=140.2
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 3556689999999999999765 58999999985443 233445667899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|++++++.++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 105 FVDHTILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp CCSEEHHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cCCcchHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999988888765432 3778889999999999999999776 99999999999999999999999999987643
Q ss_pred C-CCceeeccccCccccCccccc
Q 043136 870 D-ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 870 ~-~~~~~~~Gt~~y~APE~~~~~ 891 (902)
. .......||+.|+|||++.+.
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~ 199 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGD 199 (331)
T ss_dssp -------CCCCCTTCCHHHHTTC
T ss_pred CccccCCCcCCccccCcccccCC
Confidence 2 233456799999999998764
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.92 E-value=3.7e-25 Score=238.16 Aligned_cols=178 Identities=28% Similarity=0.379 Sum_probs=149.9
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT 784 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~ 784 (902)
+.+...|.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 445567888899999999999999775 6899999998543221 22345688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC---CCEEEeec
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE---MEARVADF 861 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~---~~~kl~DF 861 (902)
|+||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred EEEEEccCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEecc
Confidence 99999999999999887543 3678889999999999999999776 9999999999999754 47999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++............||+.|+|||++.+.+
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 199 (287)
T 2wei_A 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199 (287)
T ss_dssp TGGGTBCCCSSCSCHHHHHTTCCHHHHTTCC
T ss_pred CcceeecCCCccccccCcccccChHHhcCCC
Confidence 9998776555555667999999999987653
No 264
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.92 E-value=1.8e-25 Score=249.94 Aligned_cols=168 Identities=11% Similarity=0.023 Sum_probs=124.2
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHH---HHHhcCCcCeeEeEE-------eEEec
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEV---DVLGNVRHRNIVRLL-------GCCSN 780 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei---~il~~l~h~nIv~l~-------~~~~~ 780 (902)
|...+.||+|+||.||+|++. +++.||||++...........+.+.+|+ ++++. +||||++++ +++..
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence 445689999999999999764 7899999999766554555566777785 45555 799988855 44433
Q ss_pred C-----------------CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 043136 781 R-----------------ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTR------YKIALGVAQGICYLHHDCDPV 837 (902)
Q Consensus 781 ~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~------~~i~~qi~~~L~~LH~~~~~~ 837 (902)
. ...|+||||++ |+|.+++...... .++..+ ..++.||++||+|||+++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--- 214 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV----YVFRGDEGILALHILTAQLIRLAANLQSKG--- 214 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc----cchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence 2 33799999998 8999999865331 222333 677799999999999776
Q ss_pred eEEcCCCCCCEEEcCCCCEEEeecccceeccCCCCceeeccccCccccCcccc
Q 043136 838 IVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 838 ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+||||||+|||++.++.+||+|||+|+.... ......||+.|+|||++.+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~ 265 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNA 265 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC--CccCccCCcCCcChhhccC
Confidence 99999999999999999999999999987632 2224567899999999975
No 265
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1e-25 Score=251.47 Aligned_cols=172 Identities=25% Similarity=0.376 Sum_probs=130.8
Q ss_pred ccCCcEeeecCceEEEEEEeC--C--CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec-CCeeEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP--G--GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN-RECTML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~--~--~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~-~~~~~l 786 (902)
+...+.||+|+||.||+|+.. + +..||+|.+.... .....+.+.+|++++++++||||+++++++.. ++..|+
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 345688999999999999653 2 2468999875322 22445678899999999999999999998754 567899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++|+|.+++..... ..++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999975432 3677888899999999999999776 99999999999999999999999999987
Q ss_pred ccCCCC-----ceeeccccCccccCcccccc
Q 043136 867 IQSDES-----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~~-----~~~~~Gt~~y~APE~~~~~~ 892 (902)
...... .....||+.|+|||++.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 272 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCC
Confidence 643221 23356788999999987643
No 266
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=242.16 Aligned_cols=169 Identities=32% Similarity=0.487 Sum_probs=133.0
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
|...+.||+|+||.||+|+. .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred eeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 45668999999999999987 4788999998432 234568899999999999999999998864 489999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC-EEEeecccceeccCC
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME-ARVADFGVAKLIQSD 870 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~-~kl~DFGla~~~~~~ 870 (902)
++|+|.+++..... ....++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 82 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp TTCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 99999999975432 223567888899999999999999743356999999999999998886 799999999865432
Q ss_pred CCceeeccccCccccCcccccc
Q 043136 871 ESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 871 ~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
.....||+.|+|||++.+..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~ 179 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSN 179 (307)
T ss_dssp -------CCTTSSCHHHHTCCC
T ss_pred --cccCCCCCceEChhhhCCCC
Confidence 23457999999999997653
No 267
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.1e-24 Score=232.15 Aligned_cols=204 Identities=21% Similarity=0.199 Sum_probs=161.4
Q ss_pred cccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCC
Q 043136 97 EIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSL 176 (902)
Q Consensus 97 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 176 (902)
.++++++++++++++|+++. +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 46778888888888888874 454443 6788888888888877777888888888888888888765442 677888
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
++|+|++|+++ .+|..+.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 88888888887 66777788888888888888888766677888888888888888888777777888888888888888
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCc
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
++++..+..|.++++|++|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 888666666777888888888888888 56777777778888888888875
No 268
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=4.3e-25 Score=243.02 Aligned_cols=173 Identities=30% Similarity=0.475 Sum_probs=137.1
Q ss_pred hccCCcEeeecCceEEEEEEeCC-----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPG-----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.+...+.||+|+||.||+|.... +..||+|++.... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 34456899999999999996542 3469999986433 2344567889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcch
Confidence 9999999999999997542 24778889999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC----ceeeccccCccccCcccccc
Q 043136 866 LIQSDES----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 866 ~~~~~~~----~~~~~Gt~~y~APE~~~~~~ 892 (902)
....... .....||+.|+|||++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 226 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCC
T ss_pred hhccccccccccCCCCccccccCchhcccCC
Confidence 7643321 12234678999999987543
No 269
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.92 E-value=2.7e-25 Score=247.71 Aligned_cols=173 Identities=24% Similarity=0.321 Sum_probs=135.3
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccch--------hhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec-
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHK--------ENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN- 780 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~--------~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~- 780 (902)
..|...+.||+|+||.||+|...+++.||||++..... ......+.+.+|++++++++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 45667799999999999999888899999999854322 223345678999999999999999999999843
Q ss_pred ----CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCE
Q 043136 781 ----RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEA 856 (902)
Q Consensus 781 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~ 856 (902)
....|+||||++ |++.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCE
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCE
Confidence 346899999996 68888887432 24788889999999999999999776 9999999999999999999
Q ss_pred EEeecccceeccCCCCceeeccccCccccCcccc
Q 043136 857 RVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 857 kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
||+|||+++............||+.|+|||++.+
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 207 (362)
T 3pg1_A 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207 (362)
T ss_dssp EECCTTC---------------CGGGCCHHHHTT
T ss_pred EEEecCcccccccccccceecccceecCcHHhcC
Confidence 9999999987665555566789999999999876
No 270
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=9.1e-25 Score=228.33 Aligned_cols=203 Identities=20% Similarity=0.206 Sum_probs=121.2
Q ss_pred ccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCC-CCCCCCcccccccccceecccc-ccccCCCchhh
Q 043136 93 PIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNS-FNSTFPPGISKLRFLRIFNAYS-NSFTGPLPLEF 170 (902)
Q Consensus 93 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~ 170 (902)
.+|. +. ++|++|+|++|++++..+..|..+++|++|+|++|+ +++..+..|+++++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 33 378888888888887777778888888888888886 6655444555555555555555 55554444444
Q ss_pred hcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc---EEEeeCc-ccCCCCChhccCCC
Q 043136 171 VQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE---RIEIGYN-NLQGEVPVEFASLV 246 (902)
Q Consensus 171 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~ 246 (902)
.++++|++|+|++|+ +++ +|. |..+++|+ +|++++| ++++..+..|..++
T Consensus 102 ~~l~~L~~L~l~~n~------------------------l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~ 155 (239)
T 2xwt_C 102 KELPLLKFLGIFNTG------------------------LKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC 155 (239)
T ss_dssp ECCTTCCEEEEEEEC------------------------CCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTB
T ss_pred CCCCCCCEEeCCCCC------------------------Ccc-ccc-cccccccccccEEECCCCcchhhcCcccccchh
Confidence 444445555554444 443 333 44444444 5555555 55555555566666
Q ss_pred CCC-EEEccCccCcccCCccccCCCCccEEecCCCc-cceecCCCCCCc-CcCcEEecccCCCccccCccccccCCCCEE
Q 043136 247 NLK-YMDISACNLSGTLPSEISNLTKLEMLLLFKNH-FTGEIPVSYGNL-QALQVLDLSDNQLSGPIPASLASLKGLTRL 323 (902)
Q Consensus 247 ~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 323 (902)
+|+ +|++++|+++...+..|.. ++|++|+|++|+ +++..+..|.++ ++|++|++++|++++. |.. .+++|+.|
T Consensus 156 ~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L 231 (239)
T 2xwt_C 156 NETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKEL 231 (239)
T ss_dssp SSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEE
T ss_pred cceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCcee
Confidence 666 6666666666322233333 566666666663 665555566666 6677777777776643 332 45566666
Q ss_pred EccCc
Q 043136 324 SLMNN 328 (902)
Q Consensus 324 ~L~~N 328 (902)
+++++
T Consensus 232 ~l~~~ 236 (239)
T 2xwt_C 232 IARNT 236 (239)
T ss_dssp ECTTC
T ss_pred eccCc
Confidence 66654
No 271
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.92 E-value=2.2e-25 Score=247.29 Aligned_cols=172 Identities=23% Similarity=0.361 Sum_probs=140.4
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec--------C
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN--------R 781 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~--------~ 781 (902)
.|...+.||+|+||.||+|+. .+++.||+|++...... ......+.+|++++++++||||+++++++.. .
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 466678999999999999977 56899999998544322 1223456789999999999999999999876 3
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeec
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADF 861 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 861 (902)
+..|+||||++ |++.+.+..... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+||
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccC-CCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccc
Confidence 46899999996 488777764322 3778889999999999999999776 999999999999999999999999
Q ss_pred ccceeccC-----CCCceeeccccCccccCccccc
Q 043136 862 GVAKLIQS-----DESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 862 Gla~~~~~-----~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|+|+.+.. .......+||+.|+|||++.+.
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 203 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 203 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCC
Confidence 99987642 2223446789999999998663
No 272
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.92 E-value=5.7e-25 Score=238.66 Aligned_cols=172 Identities=25% Similarity=0.354 Sum_probs=146.2
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..|+|||
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 355678899999999999975 46889999998544322 234668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 101 YLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp CCTTEEHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred eCCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCc
Confidence 99999999998642 3678889999999999999999776 99999999999999999999999999987654
Q ss_pred CC-CceeeccccCccccCccccccc
Q 043136 870 DE-SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 870 ~~-~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.. ......||+.|+|||++.+...
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~ 196 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAY 196 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCB
T ss_pred cccccCccCCCcCccCHHHHhcCCC
Confidence 32 2345679999999999976543
No 273
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.92 E-value=3.8e-25 Score=242.88 Aligned_cols=176 Identities=28% Similarity=0.417 Sum_probs=140.0
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcE--EEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEI--IAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~--vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~l 786 (902)
.|...+.||+|+||.||+|+.. ++.. +|+|++.... .....+.+.+|+++++++ +||||+++++++.+.+..|+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 3456789999999999999654 4554 4889875322 223456688999999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhcc-----------CCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC
Q 043136 787 LYEYMPNGNLDDLLHAKNK-----------GENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME 855 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~ 855 (902)
||||+++|+|.+++..... .....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCe
Confidence 9999999999999976431 12235788899999999999999999776 999999999999999999
Q ss_pred EEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 856 ARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 856 ~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
+||+|||+++............+|+.|+|||++.+.
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 216 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS 216 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHC
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccc
Confidence 999999999855433333445678999999998654
No 274
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.92 E-value=2e-25 Score=246.45 Aligned_cols=173 Identities=24% Similarity=0.372 Sum_probs=139.9
Q ss_pred ccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHH-HhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDV-LGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|...+.||+|+||.||+|+. .+++.||||++...... ....++..|+.+ ++.++||||+++++++.+.+..|+|||
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC--HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc--HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 34457899999999999976 57899999998654322 223445556665 677899999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|+++ +|.+++..... ....+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 131 ~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 131 LMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 9975 99998875322 223578888999999999999999975 5 9999999999999999999999999998765
Q ss_pred CCCCceeeccccCccccCccccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.........||+.|+|||++.+.
T Consensus 206 ~~~~~~~~~gt~~y~aPE~~~~~ 228 (340)
T 3an0_A 206 DSVAKTIDAGCKPYMAPERINPE 228 (340)
T ss_dssp CHHHHHHSSCCCCCCCHHHHSCC
T ss_pred cccccccCCCCccccCccccccc
Confidence 43333445799999999998643
No 275
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.92 E-value=3.2e-25 Score=237.54 Aligned_cols=170 Identities=27% Similarity=0.444 Sum_probs=141.8
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.|...+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 4566789999999999999988888999999854332 23567899999999999999999999864 568999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.++.....
T Consensus 89 ~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 89 MENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp CTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred CCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999865421 23678888999999999999999776 999999999999999999999999999877543
Q ss_pred CC--ceeeccccCccccCccccc
Q 043136 871 ES--MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~--~~~~~Gt~~y~APE~~~~~ 891 (902)
.. .....||+.|+|||++.+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~ 185 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYG 185 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHC
T ss_pred ccccccCCCCccCccChhhhccC
Confidence 22 1234567899999998654
No 276
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.5e-25 Score=251.83 Aligned_cols=169 Identities=25% Similarity=0.394 Sum_probs=125.6
Q ss_pred CCcEeeecCceEEEEEEeC---CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe--cCCeeEEEE
Q 043136 714 SDKILGMGSTGTVYKAEMP---GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS--NRECTMLLY 788 (902)
Q Consensus 714 ~~~~iG~G~~g~Vy~~~~~---~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~--~~~~~~lv~ 788 (902)
..++||+|+||.||+|+.. +++.||+|++...... +.+.+|++++++++||||+++++++. .....|+||
T Consensus 25 ~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 3678999999999999864 5788999998543221 34678999999999999999999995 467899999
Q ss_pred EccCCCCHHHHHHhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE----cCCCCEEEee
Q 043136 789 EYMPNGNLDDLLHAKNK----GENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL----DGEMEARVAD 860 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl----~~~~~~kl~D 860 (902)
||++ |+|.+++..... .....+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9995 588888764332 12224788889999999999999999776 9999999999999 6778999999
Q ss_pred cccceeccCC----CCceeeccccCccccCccccc
Q 043136 861 FGVAKLIQSD----ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 861 FGla~~~~~~----~~~~~~~Gt~~y~APE~~~~~ 891 (902)
||+|+..... ......+||+.|+|||++.+.
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 210 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA 210 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCC
Confidence 9999876432 223457899999999999763
No 277
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=6.1e-25 Score=236.44 Aligned_cols=168 Identities=28% Similarity=0.395 Sum_probs=139.7
Q ss_pred CCcEeeecCceEEEEEEeC---CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 714 SDKILGMGSTGTVYKAEMP---GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 714 ~~~~iG~G~~g~Vy~~~~~---~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.++.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~ 90 (287)
T 1u59_A 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEM 90 (287)
T ss_dssp EEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEEC
T ss_pred hhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEe
Confidence 3458999999999999753 57889999986542 2345667889999999999999999999994 5568999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
+++++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 91 AGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp CTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred CCCCCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999986432 24778889999999999999999776 999999999999999999999999999877543
Q ss_pred CCc----eeeccccCccccCccccc
Q 043136 871 ESM----SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~~~----~~~~Gt~~y~APE~~~~~ 891 (902)
... ....||+.|+|||++.+.
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~ 188 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFR 188 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHC
T ss_pred cceeeccccccccccccCHHHhccC
Confidence 321 223568899999998653
No 278
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=6.3e-25 Score=237.54 Aligned_cols=173 Identities=26% Similarity=0.349 Sum_probs=141.5
Q ss_pred ccCCcEeeecCceEEEEEEeCC----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee-EE
Q 043136 712 SMSDKILGMGSTGTVYKAEMPG----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT-ML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~-~l 786 (902)
+...+.||+|+||.||+|.+.+ +..||+|++.... .....+.+.+|++++++++||||+++++++.+.+.. ++
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 3445889999999999996532 3379999985432 234566788999999999999999999999876654 99
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+.+|+|.+++.... ...++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999999997532 24677888999999999999999776 99999999999999999999999999986
Q ss_pred ccCC-----CCceeeccccCccccCccccccc
Q 043136 867 IQSD-----ESMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 867 ~~~~-----~~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
.... .......||+.|+|||++.+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 205 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRF 205 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCC
Confidence 5332 22234568899999999976543
No 279
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=3e-26 Score=255.26 Aligned_cols=261 Identities=17% Similarity=0.154 Sum_probs=153.8
Q ss_pred EEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCC----hhccCCC-CCCEEEccCccCcccCCccccCC-----CC
Q 043136 202 FLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVP----VEFASLV-NLKYMDISACNLSGTLPSEISNL-----TK 271 (902)
Q Consensus 202 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 271 (902)
+++|+.|.+++.+|..+...++|++|+|++|+|++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677777777777666666667777777777776655 5666666 67777777777776655555554 66
Q ss_pred ccEEecCCCccceecCCCCCC----c-CcCcEEecccCCCccccCccccc-----cCCCCEEEccCccccccCChhh---
Q 043136 272 LEMLLLFKNHFTGEIPVSYGN----L-QALQVLDLSDNQLSGPIPASLAS-----LKGLTRLSLMNNVLFGEIPQDI--- 338 (902)
Q Consensus 272 L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~~p~~~--- 338 (902)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+.. .++|++|+|++|.+++..+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777766544443322 2 56666666666666554444332 2466666666666654333322
Q ss_pred -hhcc-ccceEEecCceeccccCcccc----CC-CceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccc
Q 043136 339 -ELLA-DLDTLLLWNNHLTGVLPQKLG----SN-GKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLV 411 (902)
Q Consensus 339 -~~l~-~L~~L~L~~N~l~~~~~~~~~----~~-~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~ 411 (902)
..++ +|++|+|++|++++..+..+. .+ ++|+.|||++|++++... ..++..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~--------------------~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSY--------------------AELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH--------------------HHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHH--------------------HHHHHHHh
Confidence 2232 555555555555544443222 12 344444444444442100 02444454
Q ss_pred c-cCCCcEEEccCCccCCCCC----cccCCCCCCcEEEccCcccCCC-------CCCcCcccCcCceecccccccCCCcC
Q 043136 412 N-CSSLSRLRIQDNQLNGSIP----QGFGLLPNLTFMDMSRNSLSGE-------IPRDLGNAQKLEYLNISENSFQTSLP 479 (902)
Q Consensus 412 ~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p 479 (902)
. .++|++|+|++|+|++..+ ..+..+++|++|+|++|.+.+. ++..+..+++|+.||+++|.+....+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 3478888888888875443 3456677788888888875533 23456667777777777777765544
Q ss_pred hhh
Q 043136 480 SNI 482 (902)
Q Consensus 480 ~~~ 482 (902)
..+
T Consensus 302 ~~~ 304 (362)
T 3goz_A 302 IPI 304 (362)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 280
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.92 E-value=1e-24 Score=239.62 Aligned_cols=163 Identities=23% Similarity=0.341 Sum_probs=140.9
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEec--CCeeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSN--RECTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~--~~~~~l 786 (902)
.|...+.||+|+||.||+|.. .+++.||+|++.... .+.+.+|++++++++ ||||+++++++.+ ....++
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 456678999999999999965 568999999985332 245778999999997 9999999999987 567899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCC-CEEEeecccce
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEM-EARVADFGVAK 865 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~-~~kl~DFGla~ 865 (902)
||||+++++|.+++.. ++...+..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+|+
T Consensus 111 v~e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999999998742 567788899999999999999776 99999999999999777 89999999999
Q ss_pred eccCCCCceeeccccCccccCcccc
Q 043136 866 LIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 866 ~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
............||+.|+|||++.+
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~ 204 (330)
T 3nsz_A 180 FYHPGQEYNVRVASRYFKGPELLVD 204 (330)
T ss_dssp ECCTTCCCCSCCSCGGGCCHHHHTT
T ss_pred EcCCCCccccccccccccChhhhcC
Confidence 8766666666789999999999865
No 281
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.92 E-value=6.7e-25 Score=236.96 Aligned_cols=169 Identities=28% Similarity=0.435 Sum_probs=140.1
Q ss_pred CcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEccCC
Q 043136 715 DKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
...||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 35899999999999976 4688999999854432 3345688999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC-CCCEEEeecccceeccCCC-
Q 043136 794 GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG-EMEARVADFGVAKLIQSDE- 871 (902)
Q Consensus 794 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~- 871 (902)
++|.+++..... ....++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 104 ~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 104 GSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999976432 234567788889999999999999776 999999999999987 8999999999998764322
Q ss_pred CceeeccccCccccCccccc
Q 043136 872 SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 872 ~~~~~~Gt~~y~APE~~~~~ 891 (902)
......||+.|+|||++.+.
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~ 198 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKG 198 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHG
T ss_pred cccccCCCccccChhhhcCC
Confidence 23456799999999998654
No 282
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.91 E-value=7e-25 Score=239.12 Aligned_cols=179 Identities=27% Similarity=0.387 Sum_probs=135.4
Q ss_pred HhccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC---
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE--- 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~--- 782 (902)
..|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 34567789999999999999653 355899999854322 2344567889999999999999999999997654
Q ss_pred --eeEEEEEccCCCCHHHHHHhhcc-CCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEe
Q 043136 783 --CTMLLYEYMPNGNLDDLLHAKNK-GENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVA 859 (902)
Q Consensus 783 --~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~ 859 (902)
..++||||+++|+|.+++..... .....+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEe
Confidence 35999999999999999864332 22345788999999999999999999665 9999999999999999999999
Q ss_pred ecccceeccCCC---CceeeccccCccccCcccccc
Q 043136 860 DFGVAKLIQSDE---SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 860 DFGla~~~~~~~---~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|||+++...... ......|++.|+|||++.+..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 225 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV 225 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSC
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCC
Confidence 999998764332 123356788999999987653
No 283
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.91 E-value=1.7e-25 Score=245.44 Aligned_cols=172 Identities=30% Similarity=0.429 Sum_probs=134.8
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcE----EEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEI----IAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
|...+.||+|+||.||+|.+. +++. ||+|.+..... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 455689999999999999764 3443 77777643221 112234667999999999999999999986 456889
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++|+|.+++..... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+|+.
T Consensus 92 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRG----ALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEECCTTCBSHHHHHSSGG----GSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEeCCCCCHHHHHHHccc----cCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999999999875422 4666778899999999999999776 99999999999999999999999999987
Q ss_pred ccCCC---CceeeccccCccccCccccccc
Q 043136 867 IQSDE---SMSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 867 ~~~~~---~~~~~~Gt~~y~APE~~~~~~~ 893 (902)
..... ......||+.|+|||++.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 194 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKY 194 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCC
Confidence 64432 2344668889999999975543
No 284
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.91 E-value=1e-24 Score=237.86 Aligned_cols=173 Identities=27% Similarity=0.378 Sum_probs=141.5
Q ss_pred HHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
....|...+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++...+..|+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3445667789999999999999765 58999999985432 13457789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.++.
T Consensus 102 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNK----TLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHHHTC----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 9999999999999874322 4778889999999999999999776 99999999999999999999999999987
Q ss_pred ccCCC-CceeeccccCccccCcccccc
Q 043136 867 IQSDE-SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~-~~~~~~Gt~~y~APE~~~~~~ 892 (902)
..... ......||+.|+|||++.+..
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~ 201 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIG 201 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSC
T ss_pred hhhhccccCccCCCCCccChhhcCCCC
Confidence 65432 234567999999999987653
No 285
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=236.54 Aligned_cols=174 Identities=24% Similarity=0.315 Sum_probs=140.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhh-HHHHHHHHHHHHHHhcCCcCeeEeEEeEEe--cCCeeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKEN-IRRRRGVLAEVDVLGNVRHRNIVRLLGCCS--NRECTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~-~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~--~~~~~~l 786 (902)
.|.+.+.||+|+||.||+|... +++.||+|++....... ....+.+.+|++++++++||||+++++++. +.+..|+
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 4677899999999999999764 68899999985432211 233567889999999999999999999984 4557899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||++++ +.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.++.
T Consensus 86 v~e~~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEECCSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EehhccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 99999776 7777765322 24778889999999999999999776 99999999999999999999999999987
Q ss_pred ccCC---CCceeeccccCccccCccccc
Q 043136 867 IQSD---ESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 867 ~~~~---~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.... .......||+.|+|||++.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 186 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGL 186 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCC
T ss_pred cCccccccccccCCCCCCCcChhhccCc
Confidence 6432 222345799999999998763
No 286
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.91 E-value=6.4e-25 Score=239.67 Aligned_cols=177 Identities=28% Similarity=0.369 Sum_probs=144.4
Q ss_pred HhccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~ 782 (902)
..|.+.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++.++ +||||+++++++...+
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 4566779999999999999964 356899999986443 234456788999999999 7999999999987654
Q ss_pred -eeEEEEEccCCCCHHHHHHhhccCC-----------CcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043136 783 -CTMLLYEYMPNGNLDDLLHAKNKGE-----------NLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL 850 (902)
Q Consensus 783 -~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl 850 (902)
..++||||+++|+|.+++....... ...+++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEE
Confidence 5899999999999999997643210 122778889999999999999999776 9999999999999
Q ss_pred cCCCCEEEeecccceeccCCCCc---eeeccccCccccCccccc
Q 043136 851 DGEMEARVADFGVAKLIQSDESM---SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 851 ~~~~~~kl~DFGla~~~~~~~~~---~~~~Gt~~y~APE~~~~~ 891 (902)
+.++.+||+|||+++........ ....||+.|+|||++.+.
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 225 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 225 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccc
Confidence 99999999999999876543322 235688999999998654
No 287
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.91 E-value=2.3e-25 Score=246.87 Aligned_cols=173 Identities=22% Similarity=0.339 Sum_probs=145.1
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhH--------------HHHHHHHHHHHHHhcCCcCeeEeEEe
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENI--------------RRRRGVLAEVDVLGNVRHRNIVRLLG 776 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~--------------~~~~~~~~Ei~il~~l~h~nIv~l~~ 776 (902)
.|...+.||+|+||.||+|+. +++.||+|++........ ...+.+.+|++++++++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 455678999999999999988 999999999853321110 01166889999999999999999999
Q ss_pred EEecCCeeEEEEEccCCCCHHHH------HHhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEcCCCCCCEE
Q 043136 777 CCSNRECTMLLYEYMPNGNLDDL------LHAKNKGENLVADWVTRYKIALGVAQGICYLHH-DCDPVIVHRDLKPSNIL 849 (902)
Q Consensus 777 ~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~ivHrDlKp~NIL 849 (902)
++.+.+..|+||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil 184 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL 184 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence 99999999999999999999988 4321 13457889999999999999999997 65 999999999999
Q ss_pred EcCCCCEEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 850 LDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 850 l~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
++.++.+||+|||.++..... ......||+.|+|||++.+.
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~ 225 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNE 225 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSC
T ss_pred EcCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCC
Confidence 999999999999999876443 33456799999999999765
No 288
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.91 E-value=6.2e-25 Score=241.01 Aligned_cols=171 Identities=28% Similarity=0.456 Sum_probs=141.9
Q ss_pred hccCCcEeeecCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC--e
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-----PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE--C 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~--~ 783 (902)
.|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 456678999999999999973 468899999986432 234567889999999999999999999987654 7
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.++||||+++++|.+++..... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTT
T ss_pred eEEEEECCCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcc
Confidence 8999999999999999976432 4778888999999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCc----eeeccccCccccCccccc
Q 043136 864 AKLIQSDESM----SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 864 a~~~~~~~~~----~~~~Gt~~y~APE~~~~~ 891 (902)
++........ ....|+..|+|||++.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 223 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTES 223 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHC
T ss_pred hhhccccccccccccCCCCceeEECchhhcCC
Confidence 9887544321 224577889999998654
No 289
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.91 E-value=3.3e-25 Score=263.80 Aligned_cols=168 Identities=30% Similarity=0.415 Sum_probs=135.5
Q ss_pred CcEeeecCceEEEEEEe---CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 715 DKILGMGSTGTVYKAEM---PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~---~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
++.||+|+||.||+|.+ ..++.||||++..... .....+++.+|++++++++|||||++++++.. +..++||||+
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 45899999999999954 2468899999854322 22335678899999999999999999999975 4588999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCC
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE 871 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 871 (902)
++|+|.+++.... .+++..+..|+.||+.||+|||+++ ||||||||+||+++.++.+||+|||+|+.+....
T Consensus 452 ~~g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~ 523 (635)
T 4fl3_A 452 ELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523 (635)
T ss_dssp TTEEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred CCCCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence 9999999997543 3678889999999999999999776 9999999999999999999999999998765432
Q ss_pred C----ceeeccccCccccCcccccc
Q 043136 872 S----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 872 ~----~~~~~Gt~~y~APE~~~~~~ 892 (902)
. .....||+.|+|||++.+..
T Consensus 524 ~~~~~~~~~~~t~~y~APE~~~~~~ 548 (635)
T 4fl3_A 524 NYYKAQTHGKWPVKWYAPECINYYK 548 (635)
T ss_dssp -----------CGGGSCHHHHHHCC
T ss_pred cccccccCCCCceeeeChhhhcCCC
Confidence 2 23345788999999996643
No 290
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.91 E-value=4.1e-25 Score=236.67 Aligned_cols=179 Identities=25% Similarity=0.383 Sum_probs=143.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe--cCCeeEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS--NRECTMLL 787 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~--~~~~~~lv 787 (902)
.|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++. .....|+|
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 3556789999999999999764 689999999854332 2345677899999999999999999999874 45689999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC--CCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC--DPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
|||+++++|.+++..... ....+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||.++
T Consensus 86 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999976543 2234788899999999999999999754 1339999999999999999999999999998
Q ss_pred eccCCCC-ceeeccccCccccCccccc
Q 043136 866 LIQSDES-MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 866 ~~~~~~~-~~~~~Gt~~y~APE~~~~~ 891 (902)
....... .....||+.|+|||++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~ 191 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRM 191 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC
T ss_pred eeccccccccccCCCccccChHHhccC
Confidence 7643322 2345799999999998764
No 291
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.91 E-value=9e-25 Score=234.33 Aligned_cols=172 Identities=25% Similarity=0.402 Sum_probs=138.7
Q ss_pred hccCCcEeeecCceEEEEEEeCC----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPG----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
.|...+.||+|+||.||+|.... +..||+|++.... .....+.+.+|++++++++||||+++++++.+ +..|+
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 45567899999999999997532 3469999986442 23445678899999999999999999999865 45789
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++++|.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 90 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEECCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEecCCCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999976432 3678888999999999999999776 99999999999999999999999999987
Q ss_pred ccCCCC--ceeeccccCccccCcccccc
Q 043136 867 IQSDES--MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 867 ~~~~~~--~~~~~Gt~~y~APE~~~~~~ 892 (902)
...... .....||+.|+|||++.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 190 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRR 190 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCC
T ss_pred cccccccccccCCCCcceeCchhhccCC
Confidence 644322 23346788999999986543
No 292
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.91 E-value=4.5e-25 Score=244.17 Aligned_cols=174 Identities=16% Similarity=0.174 Sum_probs=136.6
Q ss_pred HhccCCcEeeecCceEEEEEEeC----CCcEEEEEEecccchhhHH--------HHHHHHHHHHHHhcCCcCeeEeEEeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP----GGEIIAVKKLWGKHKENIR--------RRRGVLAEVDVLGNVRHRNIVRLLGC 777 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~i~~~~~~~~~--------~~~~~~~Ei~il~~l~h~nIv~l~~~ 777 (902)
..|.+.+.||+|+||.||+|... ++..||+|++......... ..+.+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45667789999999999999775 5788999998654322111 12346688999999999999999999
Q ss_pred Eec----CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC
Q 043136 778 CSN----RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE 853 (902)
Q Consensus 778 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~ 853 (902)
+.. ....|+||||+ +++|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+||+++.+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccC
Confidence 987 67899999999 999999987543 4788899999999999999999776 9999999999999888
Q ss_pred C--CEEEeecccceeccCCC--------CceeeccccCccccCcccccc
Q 043136 854 M--EARVADFGVAKLIQSDE--------SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 854 ~--~~kl~DFGla~~~~~~~--------~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+ .+||+|||+|+.+.... ......||+.|+|||++.+..
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 236 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVA 236 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCC
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCC
Confidence 7 99999999998764321 114457999999999998753
No 293
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.91 E-value=1.4e-24 Score=234.10 Aligned_cols=170 Identities=28% Similarity=0.400 Sum_probs=137.2
Q ss_pred ccCCc-EeeecCceEEEEEEe---CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 712 SMSDK-ILGMGSTGTVYKAEM---PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 712 ~~~~~-~iG~G~~g~Vy~~~~---~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
|.+.+ .||+|+||.||+|.+ .+++.||||++..... .....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 33444 899999999999954 2468899999854422 223456788999999999999999999999 55678999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EECCTTEEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 99999999999997643 3677888999999999999999776 999999999999999999999999999877
Q ss_pred cCCCCc----eeeccccCccccCccccc
Q 043136 868 QSDESM----SVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 868 ~~~~~~----~~~~Gt~~y~APE~~~~~ 891 (902)
...... ....||+.|+|||++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 195 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYY 195 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred ccCCCcccccccCCCCceeeChHHhccC
Confidence 544332 223467889999998654
No 294
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.91 E-value=1.7e-25 Score=261.81 Aligned_cols=169 Identities=28% Similarity=0.430 Sum_probs=141.2
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
+.+.+.||+|+||.||+|++.++..||||++..... ..+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 456689999999999999988888899999864332 23568899999999999999999999876 6789999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCC
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDE 871 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 871 (902)
++|+|.++++.... ..+++..++.|+.||++||+|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 344 ~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 344 SKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp TTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred cCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999975422 13678888999999999999999776 9999999999999999999999999998764321
Q ss_pred --CceeeccccCccccCccccc
Q 043136 872 --SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 872 --~~~~~~Gt~~y~APE~~~~~ 891 (902)
......++..|+|||++.+.
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~ 439 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYG 439 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHC
T ss_pred eecccCCcCcccccCHHHhccC
Confidence 11234567899999998654
No 295
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.91 E-value=1.7e-24 Score=246.33 Aligned_cols=171 Identities=26% Similarity=0.281 Sum_probs=141.0
Q ss_pred HHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC------CcCeeEeEEeEEecC
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV------RHRNIVRLLGCCSNR 781 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l------~h~nIv~l~~~~~~~ 781 (902)
..+|.+.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+++++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 345777899999999999999664 58999999985432 2344566777777665 578999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC--EEEe
Q 043136 782 ECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME--ARVA 859 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~--~kl~ 859 (902)
+..++||||+. ++|.+++..... ..+++..+..++.||++||+|||+++ ||||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEe
Confidence 99999999995 699999876532 23778888999999999999999776 999999999999999987 9999
Q ss_pred ecccceeccCCCCceeeccccCccccCcccccc
Q 043136 860 DFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 860 DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|||+|+.... .....+||+.|+|||++.+..
T Consensus 245 DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~ 275 (429)
T 3kvw_A 245 DFGSSCYEHQ--RVYTYIQSRFYRAPEVILGAR 275 (429)
T ss_dssp CCTTCEETTC--CCCSSCSCGGGCCHHHHHTBC
T ss_pred ecccceecCC--cccccCCCCCccChHHHhCCC
Confidence 9999976533 234568999999999997654
No 296
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.91 E-value=1e-24 Score=236.09 Aligned_cols=172 Identities=26% Similarity=0.391 Sum_probs=140.5
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++...+..|+||||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 455688999999999999775 689999999853321 122235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSD 870 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 870 (902)
++ ++|.+++..... ...++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.++.....
T Consensus 84 ~~-~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 84 LH-QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CS-EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred cc-CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 96 699999876432 23677888899999999999999776 999999999999999999999999999876432
Q ss_pred C-CceeeccccCccccCccccc
Q 043136 871 E-SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 871 ~-~~~~~~Gt~~y~APE~~~~~ 891 (902)
. ......||+.|+|||++.+.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~ 178 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGA 178 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTC
T ss_pred ccccCcccccccccCcHHhhcc
Confidence 2 23345789999999998764
No 297
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.91 E-value=1.5e-24 Score=241.88 Aligned_cols=169 Identities=24% Similarity=0.342 Sum_probs=141.1
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC-----Cee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR-----ECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~-----~~~ 784 (902)
.|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++... ...
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4667789999999999999764 68899999985432 234456788999999999999999999999654 368
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcce
Confidence 99999996 5999988653 3677888999999999999999776 999999999999999999999999999
Q ss_pred eeccCCCC----ceeeccccCccccCccccc
Q 043136 865 KLIQSDES----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 865 ~~~~~~~~----~~~~~Gt~~y~APE~~~~~ 891 (902)
+....... ....+||+.|+|||++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 206 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTB
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCC
Confidence 87643221 2446899999999987543
No 298
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.91 E-value=2.4e-24 Score=236.49 Aligned_cols=172 Identities=26% Similarity=0.343 Sum_probs=123.2
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHH-HHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVD-VLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~-il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
|...+.||+|+||.||+|... +++.||||++..... .....++.+|+. +++.++||||+++++++...+..++|||
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 455688999999999999774 689999999864432 223344556666 6777899999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCCEEEeecccceecc
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQ 868 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~ 868 (902)
|++ |++.+++..........+++..+..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 997 4888887653332334578888899999999999999976 6 9999999999999999999999999998776
Q ss_pred CCCCceeeccccCccccCccc
Q 043136 869 SDESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 869 ~~~~~~~~~Gt~~y~APE~~~ 889 (902)
.........||+.|+|||++.
T Consensus 178 ~~~~~~~~~gt~~y~aPE~~~ 198 (327)
T 3aln_A 178 DSIAKTRDAGCRPYMAPERID 198 (327)
T ss_dssp ---------------------
T ss_pred cccccccCCCCccccCceeec
Confidence 554445568999999999984
No 299
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.91 E-value=5.7e-25 Score=261.14 Aligned_cols=167 Identities=27% Similarity=0.379 Sum_probs=134.6
Q ss_pred cEeeecCceEEEEEEeC---CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEccC
Q 043136 716 KILGMGSTGTVYKAEMP---GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMP 792 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~---~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 792 (902)
..||+|+||.||+|.+. ++..||||++...... ...+.+.+|++++++++|||||++++++.. +..|+||||++
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~ 418 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAG 418 (613)
T ss_dssp EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCC
Confidence 47999999999999653 4667999998643222 235668899999999999999999999976 56899999999
Q ss_pred CCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccCCCC
Q 043136 793 NGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDES 872 (902)
Q Consensus 793 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 872 (902)
+|+|.+++.... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.......
T Consensus 419 ~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 419 GGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp TCBHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999986532 24788889999999999999999776 99999999999999999999999999987643322
Q ss_pred ----ceeeccccCccccCcccccc
Q 043136 873 ----MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 873 ----~~~~~Gt~~y~APE~~~~~~ 892 (902)
.....+|+.|+|||++.+..
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~ 515 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRK 515 (613)
T ss_dssp ----------CCTTSCHHHHHHCC
T ss_pred eeeeccCCCCccceeCHhhhcCCC
Confidence 12234568999999986543
No 300
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=2.6e-26 Score=258.30 Aligned_cols=242 Identities=19% Similarity=0.189 Sum_probs=153.6
Q ss_pred ccCccccCCCCCCEEEccCCCCcccCchh----hhccCCCcEEEccCC---CCCCCCCccc-------ccccccceeccc
Q 043136 93 PIPPEIRYLTSLTHLNLSANAFDGPLQPA----ILELTKLRTIDISHN---SFNSTFPPGI-------SKLRFLRIFNAY 158 (902)
Q Consensus 93 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~----~~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~L~ 158 (902)
.++..+..+++|++|+|++|.+++..+.. +..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 35566777788888888888887654433 557788888888875 4445555544 566777777777
Q ss_pred cccccC----CCchhhhcccCCcEEeccCccCcCCCCccc----CCC---------CCCCEEEccCCCcc-CCCC---cc
Q 043136 159 SNSFTG----PLPLEFVQLNSLQQLNLGGSYFDGEIPSDY----RNL---------SSLRFLDLAGNSLT-GSLP---PQ 217 (902)
Q Consensus 159 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~L~~N~l~-~~~p---~~ 217 (902)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777766 356666777777777777777653333222 222 67777777777766 3333 34
Q ss_pred ccCCCCCcEEEeeCcccC--C---CCChhccCCCCCCEEEccCccCc----ccCCccccCCCCccEEecCCCcccee---
Q 043136 218 LGLLTQLERIEIGYNNLQ--G---EVPVEFASLVNLKYMDISACNLS----GTLPSEISNLTKLEMLLLFKNHFTGE--- 285 (902)
Q Consensus 218 ~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~--- 285 (902)
+..+++|++|++++|+|+ | ..|..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|++++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 556666777777777665 2 23335666667777777777764 45566666666777777777766654
Q ss_pred -cCCCC--CCcCcCcEEecccCCCcc----ccCccc-cccCCCCEEEccCccccccC
Q 043136 286 -IPVSY--GNLQALQVLDLSDNQLSG----PIPASL-ASLKGLTRLSLMNNVLFGEI 334 (902)
Q Consensus 286 -~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~L~~N~l~~~~ 334 (902)
++..+ +.+++|++|+|++|.+++ .+|..+ .++++|++|++++|.+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 33444 336667777777777665 355555 44666777777777666555
No 301
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.91 E-value=9e-25 Score=240.65 Aligned_cols=173 Identities=25% Similarity=0.338 Sum_probs=126.6
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEe--------c
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCS--------N 780 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~--------~ 780 (902)
.|...+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+.+++++. ||||+++++++. .
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 456778999999999999976 468999999985432 334566889999999995 999999999983 3
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEee
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVAD 860 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 860 (902)
....++||||+. |+|.+++...... ..+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEec
Confidence 445899999995 7999998764322 24788899999999999999999542 2399999999999999999999999
Q ss_pred cccceeccCCCCc-------------eeeccccCccccCcccc
Q 043136 861 FGVAKLIQSDESM-------------SVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 861 FGla~~~~~~~~~-------------~~~~Gt~~y~APE~~~~ 890 (902)
||+++........ ....||+.|+|||++..
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~ 224 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL 224 (337)
T ss_dssp CTTCBCCSSCC-------------------------------C
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhc
Confidence 9999876543221 14569999999999843
No 302
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.91 E-value=1.1e-24 Score=234.78 Aligned_cols=173 Identities=26% Similarity=0.340 Sum_probs=132.5
Q ss_pred hccCCcEeeecCceEEEEEEeC--CC--cEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP--GG--EIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~--~~--~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~l 786 (902)
.|...+.||+|+||.||+|++. ++ ..||+|++...........+.+.+|++++++++||||+++++++.... .++
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence 4566789999999999999752 23 368999986543333345677889999999999999999999998765 899
Q ss_pred EEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 787 LYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 787 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
||||+++++|.+++..... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 98 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEECCTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eEecccCCCHHHHHHhccC----CcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccc
Confidence 9999999999999976432 4678888999999999999999776 99999999999999999999999999988
Q ss_pred ccCCCC----ceeeccccCccccCccccc
Q 043136 867 IQSDES----MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 867 ~~~~~~----~~~~~Gt~~y~APE~~~~~ 891 (902)
...... .....||+.|+|||++.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 199 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTR 199 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCC
Confidence 754332 2234678899999998654
No 303
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.91 E-value=4.8e-25 Score=245.60 Aligned_cols=167 Identities=25% Similarity=0.376 Sum_probs=123.4
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC------Ce
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR------EC 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~------~~ 783 (902)
.|...+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+++++.++||||+++++++... ..
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 455668999999999999975 568999999985432 2334556788999999999999999999998654 56
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||+ +++|.+++... .+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CEEEEECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred EEEEeccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence 79999999 78999888642 3778888999999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+..... ....+||+.|+|||++.+
T Consensus 179 a~~~~~~--~~~~~~t~~y~aPE~~~~ 203 (367)
T 2fst_X 179 ARHTADE--MTGYVATRWYRAPEIMLN 203 (367)
T ss_dssp --------------CCCTTCCHHHHTT
T ss_pred ccccccc--CCCcCcCcCccChHHHcC
Confidence 9875432 345689999999999876
No 304
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.91 E-value=5.3e-25 Score=265.63 Aligned_cols=168 Identities=23% Similarity=0.291 Sum_probs=140.0
Q ss_pred HHhccCCcEeeecCceEEEEEEeC--CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe---
Q 043136 709 ECLSMSDKILGMGSTGTVYKAEMP--GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC--- 783 (902)
Q Consensus 709 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~--- 783 (902)
...|.+.+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 345777889999999999999775 58999999885432 23445678899999999999999999999987654
Q ss_pred --eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeec
Q 043136 784 --TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADF 861 (902)
Q Consensus 784 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DF 861 (902)
.|+||||++|++|.+++.. .+++..++.|+.||+.||+|||+++ ||||||||+||+++.+ .+||+||
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp EEEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCC
T ss_pred ceeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEec
Confidence 6999999999999887643 3788899999999999999999776 9999999999999986 8999999
Q ss_pred ccceeccCCCCceeeccccCccccCcccccc
Q 043136 862 GVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 862 Gla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|+++..... ...+||+.|||||++.+.+
T Consensus 226 G~a~~~~~~---~~~~gt~~y~aPE~~~~~~ 253 (681)
T 2pzi_A 226 GAVSRINSF---GYLYGTPGFQAPEIVRTGP 253 (681)
T ss_dssp TTCEETTCC---SCCCCCTTTSCTTHHHHCS
T ss_pred ccchhcccC---CccCCCccccCHHHHcCCC
Confidence 999876543 4467999999999987654
No 305
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.91 E-value=1.4e-24 Score=239.22 Aligned_cols=175 Identities=25% Similarity=0.323 Sum_probs=144.1
Q ss_pred HHHHHHhccCCcEeeecCceEEEEEEe--CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCe------eEeEEe
Q 043136 705 DDVLECLSMSDKILGMGSTGTVYKAEM--PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRN------IVRLLG 776 (902)
Q Consensus 705 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~n------Iv~l~~ 776 (902)
++++...|.+.+.||+|+||.||+|.+ .+++.||+|++... ....+.+.+|+++++.++|++ ++++++
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~ 84 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLE 84 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEE
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeec
Confidence 334445677789999999999999976 36889999998432 234556778999988887654 999999
Q ss_pred EEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC----
Q 043136 777 CCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---- 852 (902)
Q Consensus 777 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---- 852 (902)
++...+..++||||+ +++|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.
T Consensus 85 ~~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~ 157 (339)
T 1z57_A 85 WFEHHGHICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYT 157 (339)
T ss_dssp EEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEE
T ss_pred ccccCCcEEEEEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccc
Confidence 999999999999999 8899999876432 24678888999999999999999776 999999999999987
Q ss_pred ---------------CCCEEEeecccceeccCCCCceeeccccCccccCcccccc
Q 043136 853 ---------------EMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 853 ---------------~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
++.+||+|||+++..... ....+||+.|+|||++.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~ 210 (339)
T 1z57_A 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALG 210 (339)
T ss_dssp EEEC----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSC
T ss_pred cccCCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCC
Confidence 668999999999875432 34568999999999997653
No 306
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.91 E-value=8.1e-25 Score=246.93 Aligned_cols=178 Identities=24% Similarity=0.277 Sum_probs=144.5
Q ss_pred CCHHHHHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC--------cCeeE
Q 043136 702 FTADDVLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR--------HRNIV 772 (902)
Q Consensus 702 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~--------h~nIv 772 (902)
+..++++...|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv 104 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVV 104 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 344555566788889999999999999975 46889999998532 234556788999998885 78899
Q ss_pred eEEeEEe----cCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCC
Q 043136 773 RLLGCCS----NRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSN 847 (902)
Q Consensus 773 ~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~N 847 (902)
++++++. .....|+||||+ ++++.+.+..... ..+++..++.++.||+.||+|||++ + |+||||||+|
T Consensus 105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~N 177 (397)
T 1wak_A 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPEN 177 (397)
T ss_dssp CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGG
T ss_pred eeecceeecCCCCceEEEEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHH
Confidence 9999987 556899999999 6677777654321 2477888999999999999999976 5 9999999999
Q ss_pred EEEcCCC-------------------------------------------------CEEEeecccceeccCCCCceeecc
Q 043136 848 ILLDGEM-------------------------------------------------EARVADFGVAKLIQSDESMSVIAG 878 (902)
Q Consensus 848 ILl~~~~-------------------------------------------------~~kl~DFGla~~~~~~~~~~~~~G 878 (902)
||++.++ .+||+|||.|+..... ....+|
T Consensus 178 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~g 255 (397)
T 1wak_A 178 ILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQ 255 (397)
T ss_dssp EEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCS
T ss_pred eeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCC
Confidence 9999775 7999999999876543 344579
Q ss_pred ccCccccCcccccc
Q 043136 879 SYGYIAPGTFCFCF 892 (902)
Q Consensus 879 t~~y~APE~~~~~~ 892 (902)
|+.|+|||++.+..
T Consensus 256 t~~y~aPE~~~~~~ 269 (397)
T 1wak_A 256 TRQYRSLEVLIGSG 269 (397)
T ss_dssp CGGGCCHHHHHTSC
T ss_pred CCcccCChhhcCCC
Confidence 99999999997754
No 307
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.91 E-value=5.8e-25 Score=238.37 Aligned_cols=175 Identities=24% Similarity=0.337 Sum_probs=127.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 4556789999999999999754 688999998854322 2345568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 790 YMPNGNLDDLLHAKNK---GENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
|+++++|.+++..... .....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999875321 12235788899999999999999999776 99999999999999999999999999876
Q ss_pred ccCCC------CceeeccccCccccCcccc
Q 043136 867 IQSDE------SMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 867 ~~~~~------~~~~~~Gt~~y~APE~~~~ 890 (902)
..... ......||+.|+|||++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200 (303)
T ss_dssp CC---------------CCCTTCCHHHHHH
T ss_pred eccCCCccchhhhcccCCCccccCHHHhcc
Confidence 54321 1234579999999999864
No 308
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.91 E-value=6.1e-25 Score=241.23 Aligned_cols=178 Identities=25% Similarity=0.335 Sum_probs=141.4
Q ss_pred HhccCCcEeeecCceEEEEEEe------CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM------PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC 783 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~ 783 (902)
..|.+.+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 4566778999999999999974 346789999985332 23445578899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHHhhccC--CCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCCEEE
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKG--ENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---EMEARV 858 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---~~~~kl 858 (902)
.|+||||+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999865431 2234788889999999999999999776 999999999999984 446999
Q ss_pred eecccceeccCCCC---ceeeccccCccccCcccccc
Q 043136 859 ADFGVAKLIQSDES---MSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 859 ~DFGla~~~~~~~~---~~~~~Gt~~y~APE~~~~~~ 892 (902)
+|||+++....... .....||+.|+|||++.+..
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 221 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCC
Confidence 99999986543221 23356899999999986543
No 309
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.91 E-value=6.3e-25 Score=238.11 Aligned_cols=169 Identities=26% Similarity=0.385 Sum_probs=137.7
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4566789999999999999775 588999999854322 234568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++++|.+++..... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR----GLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp CCTTEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred eCCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999875432 3778889999999999999999776 99999999999999999999999999764321
Q ss_pred -CCCceeeccccCccccCccc
Q 043136 870 -DESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 870 -~~~~~~~~Gt~~y~APE~~~ 889 (902)
........||+.|+|||++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~ 190 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVM 190 (302)
T ss_dssp HHHC-----CCGGGCCHHHHH
T ss_pred cccccccccCChhhcCCeeec
Confidence 11223467999999999984
No 310
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.91 E-value=1.2e-24 Score=232.92 Aligned_cols=167 Identities=29% Similarity=0.398 Sum_probs=132.6
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC-CeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR-ECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~-~~~~lv~e 789 (902)
.|...+.||+|+||.||+|+. .++.||+|++.... ..+.+.+|++++++++||||+++++++... +..|+|||
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 22 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 355678999999999999987 58899999985432 345688999999999999999999997554 47899999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|+++|+|.+++..... ..+++..+..++.|+++|++|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 96 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred cCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999976432 23677888899999999999999776 99999999999999999999999999986543
Q ss_pred CCCceeeccccCccccCccccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
. .....+++.|+|||++.+.
T Consensus 170 ~--~~~~~~~~~y~aPE~~~~~ 189 (278)
T 1byg_A 170 T--QDTGKLPVKWTAPEALREK 189 (278)
T ss_dssp --------CCTTTSCHHHHHHC
T ss_pred c--ccCCCccccccCHHHhCCC
Confidence 3 2334688999999998654
No 311
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=6.3e-25 Score=239.10 Aligned_cols=224 Identities=15% Similarity=0.160 Sum_probs=189.0
Q ss_pred CEEEEEcCCCCcccccCc---cccCCCCCCEEEccCCCCcccCchhh--hccCCCcEEEccCCCCCCCCC----cccccc
Q 043136 79 QITSLDLSRRSLSGPIPP---EIRYLTSLTHLNLSANAFDGPLQPAI--LELTKLRTIDISHNSFNSTFP----PGISKL 149 (902)
Q Consensus 79 ~v~~L~L~~~~l~g~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 149 (902)
+++.|.+.+..++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467788888777532111 22345779999999999999999988 899999999999999998666 345679
Q ss_pred cccceeccccccccCCCchhhhcccCCcEEeccCccCcCC--C--CcccCCCCCCCEEEccCCCccCCCCc----cccCC
Q 043136 150 RFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGE--I--PSDYRNLSSLRFLDLAGNSLTGSLPP----QLGLL 221 (902)
Q Consensus 150 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 221 (902)
++|++|+|++|++++..|..|+.+++|++|+|++|++.+. + +..+.++++|++|+|++|+++. +|. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999999999999999999999999998752 2 2334789999999999999983 343 25788
Q ss_pred CCCcEEEeeCcccCCCCChhccCC---CCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcE
Q 043136 222 TQLERIEIGYNNLQGEVPVEFASL---VNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQV 298 (902)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 298 (902)
++|++|+|++|+|++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999999888888777 69999999999999 6777764 8999999999999964 43 678899999
Q ss_pred EecccCCCcc
Q 043136 299 LDLSDNQLSG 308 (902)
Q Consensus 299 L~Ls~N~l~~ 308 (902)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 312
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=238.09 Aligned_cols=173 Identities=28% Similarity=0.415 Sum_probs=132.8
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcE----EEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEI----IAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
.|...+.||+|+||.||+|++. +++. ||+|.+..... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS--CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 3556789999999999999753 4443 57776643221 123456889999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+|+||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 99999999999999976432 4778888999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC---ceeeccccCccccCccccccc
Q 043136 866 LIQSDES---MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 866 ~~~~~~~---~~~~~Gt~~y~APE~~~~~~~ 893 (902)
....... .....||+.|+|||++.+...
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~ 196 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIY 196 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCC
Confidence 7643322 233456889999999876543
No 313
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.91 E-value=1e-24 Score=239.20 Aligned_cols=174 Identities=27% Similarity=0.422 Sum_probs=140.0
Q ss_pred hccCCcEeeecCceEEEEEEe--CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC---CcCeeEeEEeEEe-----c
Q 043136 711 LSMSDKILGMGSTGTVYKAEM--PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV---RHRNIVRLLGCCS-----N 780 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l---~h~nIv~l~~~~~-----~ 780 (902)
.|...+.||+|+||.||+|+. .+++.||+|++....... .....+.+|+++++.+ +||||+++++++. .
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 466778999999999999987 468899999986432211 1112345677666655 8999999999987 5
Q ss_pred CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEee
Q 043136 781 RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVAD 860 (902)
Q Consensus 781 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~D 860 (902)
....++||||++ |+|.+++..... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred CceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence 567899999997 699999876432 23678888999999999999999776 99999999999999999999999
Q ss_pred cccceeccCCCCceeeccccCccccCcccccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+++............||+.|+|||++.+..
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 195 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCC
Confidence 99998765544455678999999999987654
No 314
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.91 E-value=4.3e-24 Score=237.10 Aligned_cols=168 Identities=25% Similarity=0.377 Sum_probs=138.3
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecC-----Cee
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNR-----ECT 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~-----~~~ 784 (902)
.|...+.||+|+||.||+|++. +++.||||++.... .......+.+|++++++++||||+++++++... ...
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 3556789999999999999764 68999999985432 234455678999999999999999999987654 678
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccc
Q 043136 785 MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVA 864 (902)
Q Consensus 785 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla 864 (902)
|+||||+. |+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccc
Confidence 99999996 6999988652 3678888999999999999999776 999999999999999999999999999
Q ss_pred eeccCCCC-----------ceeeccccCccccCcccc
Q 043136 865 KLIQSDES-----------MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 865 ~~~~~~~~-----------~~~~~Gt~~y~APE~~~~ 890 (902)
+....... ....+||+.|+|||++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 196 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHS
T ss_pred cccccccccccCccccccchhhccccccccCCeeecc
Confidence 87643211 223578999999998754
No 315
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.5e-25 Score=252.07 Aligned_cols=241 Identities=22% Similarity=0.255 Sum_probs=140.6
Q ss_pred cCchhhhccCCCcEEEccCCCCCCCCC----cccccccccceeccccc---cccCCCchhh-------hcccCCcEEecc
Q 043136 117 PLQPAILELTKLRTIDISHNSFNSTFP----PGISKLRFLRIFNAYSN---SFTGPLPLEF-------VQLNSLQQLNLG 182 (902)
Q Consensus 117 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 182 (902)
.++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 366778889999999999999887643 34667888888888885 4556666655 566777777777
Q ss_pred CccCcC----CCCcccCCCCCCCEEEccCCCccCCCCccc----cCC---------CCCcEEEeeCcccC-CCCC---hh
Q 043136 183 GSYFDG----EIPSDYRNLSSLRFLDLAGNSLTGSLPPQL----GLL---------TQLERIEIGYNNLQ-GEVP---VE 241 (902)
Q Consensus 183 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~L~~N~l~-~~~p---~~ 241 (902)
+|.+++ .+|..+.++++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777765 355566666777777777777653322222 222 56666666666665 2333 24
Q ss_pred ccCCCCCCEEEccCccCc--c---cCCccccCCCCccEEecCCCccc----eecCCCCCCcCcCcEEecccCCCccc---
Q 043136 242 FASLVNLKYMDISACNLS--G---TLPSEISNLTKLEMLLLFKNHFT----GEIPVSYGNLQALQVLDLSDNQLSGP--- 309 (902)
Q Consensus 242 ~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~--- 309 (902)
+..+++|++|+|++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 445556666666666555 2 22334555555555555555553 34444455555555555555555443
Q ss_pred -cCccccc--cCCCCEEEccCccccc----cCChhh-hhccccceEEecCceeccc
Q 043136 310 -IPASLAS--LKGLTRLSLMNNVLFG----EIPQDI-ELLADLDTLLLWNNHLTGV 357 (902)
Q Consensus 310 -~p~~l~~--l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~ 357 (902)
++..+.. +++|+.|+|++|.+++ .+|..+ ..+++|++|++++|++++.
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 3333322 4555555555555544 244444 3345555555555555433
No 316
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.90 E-value=2.3e-24 Score=240.80 Aligned_cols=166 Identities=25% Similarity=0.377 Sum_probs=135.8
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCee-----
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECT----- 784 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~----- 784 (902)
.|...+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|++++++++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 455668999999999999976 468999999986433 2334556788999999999999999999999877654
Q ss_pred -EEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 785 -MLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 785 -~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
|+||||+. ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 122 ~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999996 688877632 2678888999999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
++..... ....+||+.|+|||++.+
T Consensus 191 a~~~~~~--~~~~~~t~~y~aPE~~~~ 215 (371)
T 4exu_A 191 ARHADAE--MTGYVVTRWYRAPEVILS 215 (371)
T ss_dssp C----------CTTCCCTTSCHHHHSC
T ss_pred ccccccC--cCCcccCccccCHHHhcC
Confidence 9865432 345679999999999876
No 317
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=246.98 Aligned_cols=166 Identities=27% Similarity=0.381 Sum_probs=129.4
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...++||+|+||+||.....+++.||||++...... .+.+|+++++++ +|||||++++++.+.+..|+||||
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4456889999999977665668999999998543222 245799999998 799999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC-----CCCEEEeecccce
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG-----EMEARVADFGVAK 865 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~-----~~~~kl~DFGla~ 865 (902)
++ |+|.+++...... ......+.++.||++||+|||+++ |+||||||+||+++. ...+||+|||+|+
T Consensus 100 ~~-g~L~~~l~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFA----HLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CS-EEHHHHHHSSSCC----CCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CC-CCHHHHHHhcCCC----ccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 95 6999999764321 222334579999999999999776 999999999999953 2368899999998
Q ss_pred eccCCC----CceeeccccCccccCccccc
Q 043136 866 LIQSDE----SMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 866 ~~~~~~----~~~~~~Gt~~y~APE~~~~~ 891 (902)
...... .....+||+.|+|||++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~ 201 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcc
Confidence 765332 23456799999999999754
No 318
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.90 E-value=1.2e-24 Score=248.28 Aligned_cols=170 Identities=31% Similarity=0.431 Sum_probs=129.4
Q ss_pred hccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEecCCeeEEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSNRECTMLLYE 789 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~~~~~~lv~e 789 (902)
.+..++.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..|+|||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 445568999999999988777789999999984322 23467899999876 89999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCc--ccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCC-------------C
Q 043136 790 YMPNGNLDDLLHAKNKGENL--VADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGE-------------M 854 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~-------------~ 854 (902)
|+. |+|.+++......... ...+..++.++.||+.||+|||+++ |+||||||+||+++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCce
Confidence 995 6999999765432111 1122234679999999999999776 9999999999999754 4
Q ss_pred CEEEeecccceeccCCCC-----ceeeccccCccccCcccc
Q 043136 855 EARVADFGVAKLIQSDES-----MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 855 ~~kl~DFGla~~~~~~~~-----~~~~~Gt~~y~APE~~~~ 890 (902)
.+||+|||+|+....... ....+||+.|+|||++.+
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence 899999999998754322 234679999999999976
No 319
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=6.4e-25 Score=243.63 Aligned_cols=167 Identities=17% Similarity=0.189 Sum_probs=137.2
Q ss_pred hccCCcEeeecCceEEEEEEeCC---------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEe--------
Q 043136 711 LSMSDKILGMGSTGTVYKAEMPG---------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVR-------- 773 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~~---------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~-------- 773 (902)
.|.+.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 45667899999999999997753 789999998533 24678999999999999887
Q ss_pred -------EEeEEec-CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCC
Q 043136 774 -------LLGCCSN-RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKP 845 (902)
Q Consensus 774 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp 845 (902)
+++++.. .+..|+||||+ +++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp 187 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTA 187 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCH
Confidence 6677765 67899999999 999999998642 124788999999999999999999776 99999999
Q ss_pred CCEEEcCCC--CEEEeecccceeccCCC--------CceeeccccCccccCcccccc
Q 043136 846 SNILLDGEM--EARVADFGVAKLIQSDE--------SMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 846 ~NILl~~~~--~~kl~DFGla~~~~~~~--------~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+||+++.++ .+||+|||+++.+.... ......||+.|+|||++.+..
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 244 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG 244 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCC
Confidence 999999998 89999999998764322 113347999999999997753
No 320
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=236.40 Aligned_cols=170 Identities=24% Similarity=0.393 Sum_probs=136.1
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcCeeEeEEeEEec------CC
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHRNIVRLLGCCSN------RE 782 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~nIv~l~~~~~~------~~ 782 (902)
.|.+.+.||+|+||.||+|++ .+++.||+|++...... .+.+.+|+++++++ +||||+++++++.. .+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 456678999999999999976 46899999998543322 34577899999998 79999999999976 46
Q ss_pred eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecc
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFG 862 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 862 (902)
..|+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCT
T ss_pred eEEEEEEcCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCc
Confidence 78999999999999999976432 24677888899999999999999776 9999999999999999999999999
Q ss_pred cceeccCCC-CceeeccccCccccCcccc
Q 043136 863 VAKLIQSDE-SMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 863 la~~~~~~~-~~~~~~Gt~~y~APE~~~~ 890 (902)
+++...... ......||+.|+|||++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 203 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203 (326)
T ss_dssp TTC-------------CCGGGCCHHHHC-
T ss_pred CceecCcCccccccccCCccccChhhhcc
Confidence 998764322 2345679999999999863
No 321
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.90 E-value=2.3e-24 Score=232.83 Aligned_cols=171 Identities=22% Similarity=0.293 Sum_probs=137.5
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEe-EEecCCeeEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLG-CCSNRECTMLL 787 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~-~~~~~~~~~lv 787 (902)
..|...+.||+|+||.||+|++ .+++.||||++..... .+.+.+|++++++++|++++..++ ++...+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 4577789999999999999976 5789999998643322 234678999999998777665555 44677888999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVA 864 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla 864 (902)
|||+ +++|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++
T Consensus 84 ~e~~-~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EECC-CCBHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEcc-CCCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 9999 9999999875332 3788899999999999999999776 9999999999999 78899999999999
Q ss_pred eeccCCCC--------ceeeccccCccccCccccccc
Q 043136 865 KLIQSDES--------MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 865 ~~~~~~~~--------~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+....... .....||+.|+|||++.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 192 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQ 192 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCC
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCC
Confidence 87754322 235679999999999977543
No 322
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=8.4e-24 Score=221.00 Aligned_cols=196 Identities=16% Similarity=0.214 Sum_probs=158.3
Q ss_pred cceeccccccccCCCchhhhcccCCcEEeccCcc-CcCCCCcccCCCCCCCEEEccC-CCccCCCCccccCCCCCcEEEe
Q 043136 152 LRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSY-FDGEIPSDYRNLSSLRFLDLAG-NSLTGSLPPQLGLLTQLERIEI 229 (902)
Q Consensus 152 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L 229 (902)
|++|++++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|++
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l 112 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeC
Confidence 3334444444444444556666777777777775 6655566788889999999998 9999777788999999999999
Q ss_pred eCcccCCCCChhccCCCCCC---EEEccCc-cCcccCCccccCCCCcc-EEecCCCccceecCCCCCCcCcCcEEecccC
Q 043136 230 GYNNLQGEVPVEFASLVNLK---YMDISAC-NLSGTLPSEISNLTKLE-MLLLFKNHFTGEIPVSYGNLQALQVLDLSDN 304 (902)
Q Consensus 230 ~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 304 (902)
++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+..|.. ++|++|+|++|
T Consensus 113 ~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 113 FNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 9999997 665 88999998 9999999 99988888899999999 9999999999544445555 89999999999
Q ss_pred C-CccccCcccccc-CCCCEEEccCccccccCChhhhhccccceEEecCce
Q 043136 305 Q-LSGPIPASLASL-KGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNH 353 (902)
Q Consensus 305 ~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 353 (902)
+ +++..+..|..+ ++|++|++++|++++. |.. .+++|+.|+++++.
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 5 998778899999 9999999999999854 443 67789999988763
No 323
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.90 E-value=5e-24 Score=230.23 Aligned_cols=170 Identities=22% Similarity=0.298 Sum_probs=138.6
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEe-EEecCCeeEEEE
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLG-CCSNRECTMLLY 788 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~-~~~~~~~~~lv~ 788 (902)
.|...+.||+|+||.||+|++ .+++.||+|++...... +.+.+|++++++++|++++..+. ++...+..++||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 456678999999999999976 57899999998543322 34678999999998877655554 446677889999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccce
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVAK 865 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla~ 865 (902)
||+ +++|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++
T Consensus 85 e~~-~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp ECC-CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred Eec-CCCHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 999 9999999974332 4788899999999999999999776 9999999999999 478899999999998
Q ss_pred eccCCCC--------ceeeccccCccccCccccccc
Q 043136 866 LIQSDES--------MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 866 ~~~~~~~--------~~~~~Gt~~y~APE~~~~~~~ 893 (902)
....... .....||+.|+|||++.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 192 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQ 192 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCC
T ss_pred cccccccccccccccccccccccccCChhhhcCCCC
Confidence 7754322 245679999999999977543
No 324
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.4e-23 Score=221.08 Aligned_cols=180 Identities=20% Similarity=0.208 Sum_probs=121.1
Q ss_pred CcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCC
Q 043136 416 LSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASS 495 (902)
Q Consensus 416 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 495 (902)
.++++++++.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 445555555555 3444332 4555555555555555555555555555555555555555555555555566666666
Q ss_pred CccCCCccccc-ccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCC
Q 043136 496 SKLTGKIPDFI-GCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIP 574 (902)
Q Consensus 496 N~l~~~~p~~~-~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 574 (902)
|++++..+..+ ++++|++|+|++|++++..+..++.+++|+.|+|++|+|++..|..|+.+++|+.|||++|++++..|
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 66555444433 25666666677777765555567788888888888888888777788888888888888888887777
Q ss_pred CCCcCCccceeecccCCcccccCC
Q 043136 575 SNFENCSTLESFNVSYNLLTGPIP 598 (902)
Q Consensus 575 ~~~~~l~~L~~l~ls~N~l~g~ip 598 (902)
..|..+++|+.|+|++|++++..+
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHhCCCCCCEEEeeCCceeCCcc
Confidence 788888888888888888887644
No 325
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.90 E-value=1.5e-24 Score=236.34 Aligned_cols=179 Identities=25% Similarity=0.296 Sum_probs=138.1
Q ss_pred HHHHHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhH---HHHHHHHHHHHHHhcC----CcCeeEeEE
Q 043136 704 ADDVLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENI---RRRRGVLAEVDVLGNV----RHRNIVRLL 775 (902)
Q Consensus 704 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~---~~~~~~~~Ei~il~~l----~h~nIv~l~ 775 (902)
..+.+...|...+.||+|+||.||+|+. .+++.||+|++........ .....+.+|++++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3455666788889999999999999976 4688999999864432211 1233456788888888 899999999
Q ss_pred eEEecCCeeEEEEEc-cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CC
Q 043136 776 GCCSNRECTMLLYEY-MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-GE 853 (902)
Q Consensus 776 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-~~ 853 (902)
+++...+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ .+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCC
Confidence 999999999999999 78999999997643 3778889999999999999999776 99999999999999 88
Q ss_pred CCEEEeecccceeccCCCCceeeccccCccccCccccc
Q 043136 854 MEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 854 ~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
+.+||+|||+++..... ......||+.|+|||++.+.
T Consensus 177 ~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~ 213 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRH 213 (312)
T ss_dssp TEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHS
T ss_pred CeEEEEEcchhhhcccC-cccccCCcccccCceeeecC
Confidence 99999999999877543 33456799999999998654
No 326
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.90 E-value=5e-24 Score=254.60 Aligned_cols=172 Identities=20% Similarity=0.313 Sum_probs=139.2
Q ss_pred HhccCCcEeeecCceEEEEEEeCC----CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPG----GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~ 785 (902)
..|...+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++. ++..|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 345667899999999999997632 4679999875432 3345567899999999999999999999985 45689
Q ss_pred EEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 786 LLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 786 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 467 lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCe
Confidence 9999999999999997543 24778888999999999999999776 9999999999999999999999999998
Q ss_pred eccCCCC--ceeeccccCccccCccccc
Q 043136 866 LIQSDES--MSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 866 ~~~~~~~--~~~~~Gt~~y~APE~~~~~ 891 (902)
....... .....||+.|||||++.+.
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 567 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFR 567 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCC
Confidence 7654332 2234577899999998654
No 327
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.90 E-value=6.7e-24 Score=243.75 Aligned_cols=171 Identities=20% Similarity=0.268 Sum_probs=140.8
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc-CeeEeEEeEEecCCeeEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH-RNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-~nIv~l~~~~~~~~~~~lv 787 (902)
..|.+.+.||+|+||.||+|++ .+++.||||++...... +++.+|+++++.++| ++|+.+..++...+..++|
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 3466788999999999999976 56899999987543322 236789999999976 6666777777888899999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE---cCCCCEEEeecccc
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL---DGEMEARVADFGVA 864 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl---~~~~~~kl~DFGla 864 (902)
|||+ +++|.+++..... .+++..++.|+.||+.||+|||+++ ||||||||+|||+ +.++.+||+|||+|
T Consensus 82 me~~-g~sL~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EECC-CCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EECC-CCCHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 9999 9999999975332 4788999999999999999999776 9999999999999 68899999999999
Q ss_pred eeccCCCC--------ceeeccccCccccCccccccc
Q 043136 865 KLIQSDES--------MSVIAGSYGYIAPGTFCFCFS 893 (902)
Q Consensus 865 ~~~~~~~~--------~~~~~Gt~~y~APE~~~~~~~ 893 (902)
+.+..... ....+||+.|+|||++.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 190 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQ 190 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCC
Confidence 98754332 125689999999999977543
No 328
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.90 E-value=5.5e-24 Score=232.04 Aligned_cols=170 Identities=22% Similarity=0.301 Sum_probs=138.2
Q ss_pred HhccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC--cCeeEeEEeEEecCCeeEEE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR--HRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~--h~nIv~l~~~~~~~~~~~lv 787 (902)
..|.+.+.||+|+||.||+|...+++.||+|++..... .....+.+.+|++++++++ ||||+++++++...+..|+|
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 34566789999999999999988899999999854332 3345677889999999997 59999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
|| +.+++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||++++ +.+||+|||+++..
T Consensus 107 ~e-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EC-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred Ee-cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 99 55889999997643 3677888899999999999999776 999999999999964 89999999999876
Q ss_pred cCCCC---ceeeccccCccccCcccc
Q 043136 868 QSDES---MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 868 ~~~~~---~~~~~Gt~~y~APE~~~~ 890 (902)
..... .....||+.|+|||++.+
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKD 202 (313)
T ss_dssp -------------CCGGGCCHHHHTT
T ss_pred cCccccccccCCCCCCCcCCHHHHhh
Confidence 43322 234579999999999976
No 329
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.90 E-value=6.8e-24 Score=231.81 Aligned_cols=167 Identities=23% Similarity=0.382 Sum_probs=131.4
Q ss_pred hccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe----------
Q 043136 711 LSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS---------- 779 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~---------- 779 (902)
.|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 4566789999999999999775 48999999985432 344567889999999999999999999874
Q ss_pred ----cCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCC
Q 043136 780 ----NRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-GEM 854 (902)
Q Consensus 780 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-~~~ 854 (902)
+....|+||||++ |+|.+++... .+++..+..++.|+++||+|||+++ |+||||||+||+++ +++
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDL 158 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTT
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCC
Confidence 3467899999997 6999988542 3677888899999999999999776 99999999999997 567
Q ss_pred CEEEeecccceeccCC----CCceeeccccCccccCcccc
Q 043136 855 EARVADFGVAKLIQSD----ESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 855 ~~kl~DFGla~~~~~~----~~~~~~~Gt~~y~APE~~~~ 890 (902)
.+||+|||+++..... .......||+.|+|||++.+
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 198 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcC
Confidence 9999999999876432 12234567999999998854
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.1e-24 Score=251.76 Aligned_cols=159 Identities=17% Similarity=0.239 Sum_probs=123.0
Q ss_pred cCCcEeeecCceEEEEEEeCCCcEEEEEEecccch-----hhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEE
Q 043136 713 MSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHK-----ENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~-----~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv 787 (902)
...+.||+|+||.||+|+. .++.+|+|+...+.. ......+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 578889988654322 1222356689999999999999999665555567778999
Q ss_pred EEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 788 YEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 788 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+||+++. .+||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999999864 3378999999999999776 999999999999998 9999999999987
Q ss_pred cCCCC--------ceeeccccCccccCcccc
Q 043136 868 QSDES--------MSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 868 ~~~~~--------~~~~~Gt~~y~APE~~~~ 890 (902)
..... ....+||+.|||||++.+
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 54322 135789999999999975
No 331
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.90 E-value=4.3e-24 Score=237.09 Aligned_cols=166 Identities=25% Similarity=0.374 Sum_probs=135.3
Q ss_pred hccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCe------
Q 043136 711 LSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNREC------ 783 (902)
Q Consensus 711 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~------ 783 (902)
.|...+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.++++++||||+++++++...+.
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 355678999999999999976 468999999985432 233445678899999999999999999999987654
Q ss_pred eEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeeccc
Q 043136 784 TMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGV 863 (902)
Q Consensus 784 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGl 863 (902)
.|+||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 688776632 2678888999999999999999776 99999999999999999999999999
Q ss_pred ceeccCCCCceeeccccCccccCcccc
Q 043136 864 AKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 864 a~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
++..... .....||+.|+|||++.+
T Consensus 173 ~~~~~~~--~~~~~~t~~y~aPE~~~~ 197 (353)
T 3coi_A 173 ARHADAE--MTGYVVTRWYRAPEVILS 197 (353)
T ss_dssp TTC----------CCSBCCSCHHHHSC
T ss_pred ccCCCCC--ccccccCcCcCCHHHHhC
Confidence 9875432 345679999999999876
No 332
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.90 E-value=2.3e-24 Score=239.97 Aligned_cols=173 Identities=24% Similarity=0.298 Sum_probs=127.5
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCC------
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRE------ 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~------ 782 (902)
..|.+.+.||+|+||.||+|+. .+++.||||++...... .....+|++.+..++||||+++++++...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 3567788999999999999977 46899999988543222 223456777888889999999999986533
Q ss_pred -eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEcCCCCCCEEEcC-CCCEEE
Q 043136 783 -CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLH--HDCDPVIVHRDLKPSNILLDG-EMEARV 858 (902)
Q Consensus 783 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--~~~~~~ivHrDlKp~NILl~~-~~~~kl 858 (902)
..++||||+++ ++.+.+..... .....++..+..++.|++.|++|+| +.+ |+||||||+||+++. ++.+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEE
T ss_pred eeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEE
Confidence 37899999975 66555543221 2234677888899999999999999 555 999999999999997 899999
Q ss_pred eecccceeccCCCCceeeccccCccccCccccc
Q 043136 859 ADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 859 ~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
+|||+++............||+.|+|||++.+.
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~ 206 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGN 206 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTC
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCC
Confidence 999999987666555667899999999998653
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=3.1e-25 Score=244.48 Aligned_cols=252 Identities=19% Similarity=0.243 Sum_probs=141.9
Q ss_pred CcEEEccCCCCCCCCCcccccc--cccceeccccccccCCCchhhhcccCCcEEeccCccCcCC-CCcccCCCCCCCEEE
Q 043136 128 LRTIDISHNSFNSTFPPGISKL--RFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGE-IPSDYRNLSSLRFLD 204 (902)
Q Consensus 128 L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 204 (902)
++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 666777776665 3445555 6666666666666665554 34566666666666666544 555566666666666
Q ss_pred ccCCCccCCCCccccCCCCCcEEEeeCc-ccCCC-CChhccCCCCCCEEEccCc-cCccc-CCccccCCC-CccEEecCC
Q 043136 205 LAGNSLTGSLPPQLGLLTQLERIEIGYN-NLQGE-VPVEFASLVNLKYMDISAC-NLSGT-LPSEISNLT-KLEMLLLFK 279 (902)
Q Consensus 205 L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~L~~ 279 (902)
|++|.+++..|..++.+++|++|++++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666666555566666666666666666 45542 4445566666666666666 66543 345555666 666666666
Q ss_pred C--ccc-eecCCCCCCcCcCcEEecccCC-CccccCccccccCCCCEEEccCcc-ccccCChhhhhccccceEEecCcee
Q 043136 280 N--HFT-GEIPVSYGNLQALQVLDLSDNQ-LSGPIPASLASLKGLTRLSLMNNV-LFGEIPQDIELLADLDTLLLWNNHL 354 (902)
Q Consensus 280 N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l 354 (902)
| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 6 333 2344445556666666666666 555555556666666666666663 21111123455556666666655 2
Q ss_pred ccccCccccCC-CceeEEEecCCcccCCCCCCcc
Q 043136 355 TGVLPQKLGSN-GKLLTVDVSSNSLTGPIPPTIC 387 (902)
Q Consensus 355 ~~~~~~~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 387 (902)
+. ..+..+ ..+..|+++.|++++..|+.++
T Consensus 284 ~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 284 PD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 21 122222 1244444555555555555443
No 334
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.90 E-value=1.6e-23 Score=235.04 Aligned_cols=172 Identities=27% Similarity=0.259 Sum_probs=139.6
Q ss_pred HhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cC-----eeEeEEeEEecCC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HR-----NIVRLLGCCSNRE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~-----nIv~l~~~~~~~~ 782 (902)
..|.+.+.||+|+||.||+|... +++.||||++... ......+.+|+++++.++ |+ +|+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 45677789999999999999764 6889999998532 223455667888887774 44 5999999999999
Q ss_pred eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc--CCCCEEEee
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD--GEMEARVAD 860 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~--~~~~~kl~D 860 (902)
..|+||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ +.+||||||||+||+++ .++.+||+|
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred ceEEEEecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999995 599999976532 2367888899999999999999953 34699999999999994 478899999
Q ss_pred cccceeccCCCCceeeccccCccccCcccccc
Q 043136 861 FGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 861 FGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
||+|+..... ....+||+.|+|||++.+..
T Consensus 205 FG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~ 234 (382)
T 2vx3_A 205 FGSSCQLGQR--IYQYIQSRFYRSPEVLLGMP 234 (382)
T ss_dssp CTTCEETTCC--CCSSCSCGGGCCHHHHTTCC
T ss_pred ccCceecccc--cccccCCccccChHHHcCCC
Confidence 9999876432 34568999999999998754
No 335
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.90 E-value=1.2e-23 Score=231.80 Aligned_cols=163 Identities=24% Similarity=0.379 Sum_probs=114.1
Q ss_pred CcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec----CCeeEEEEE
Q 043136 715 DKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN----RECTMLLYE 789 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~----~~~~~lv~e 789 (902)
.++||+|+||.||+|.+. +++.||+|++.... ...++ ....++.++||||+++++++.. ....++|||
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 567999999999999775 68999999984321 11221 2223455689999999999876 456899999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCCEEEeeccccee
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---EMEARVADFGVAKL 866 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---~~~~kl~DFGla~~ 866 (902)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++.
T Consensus 107 ~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 107 CMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp CCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999976432 24788899999999999999999776 999999999999976 45599999999987
Q ss_pred ccCCCCceeeccccCccccCccccc
Q 043136 867 IQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 867 ~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
.... .....+||+.|+|||++.+.
T Consensus 181 ~~~~-~~~~~~~t~~y~aPE~~~~~ 204 (336)
T 3fhr_A 181 TTQN-ALQTPCYTPYYVAPEVLGPE 204 (336)
T ss_dssp C-----------------------C
T ss_pred cccc-ccccCCCCcCccChhhhCCC
Confidence 6433 33456799999999998543
No 336
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.90 E-value=3.7e-24 Score=251.03 Aligned_cols=176 Identities=24% Similarity=0.329 Sum_probs=146.2
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEec------CC
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSN------RE 782 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~------~~ 782 (902)
..|.+.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|++++++++||||+++++++.. .+
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 4577889999999999999976 468999999985432 33456678899999999999999999998765 66
Q ss_pred eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCC---EEEe
Q 043136 783 CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEME---ARVA 859 (902)
Q Consensus 783 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~---~kl~ 859 (902)
..|+||||+++|+|.+++...... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~--~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENC--CGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCT--TCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEc
Confidence 789999999999999999764322 23566777899999999999999776 999999999999997765 9999
Q ss_pred ecccceeccCCCCceeeccccCccccCcccccc
Q 043136 860 DFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 860 DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
|||.++............||+.|+|||++.+..
T Consensus 167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 199 (676)
T 3qa8_A 167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 199 (676)
T ss_dssp SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSC
T ss_pred ccccccccccccccccccCCcccCChHHhccCC
Confidence 999999876666566678999999999997644
No 337
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=229.23 Aligned_cols=170 Identities=25% Similarity=0.347 Sum_probs=122.3
Q ss_pred ccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|...+.||+|+||.||+|++. +++.||||++...... ....+.+..+..+++.++||||+++++++.+.+..|+||||
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 105 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence 445678999999999999774 6899999998644322 22333444555678888999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
+ ++.+..+..... ..+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++....
T Consensus 106 ~-~~~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 106 M-GTCAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp C-SEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred c-CCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 9 556666554322 2467888899999999999999974 5 99999999999999999999999999987765
Q ss_pred CCCceeeccccCccccCcccc
Q 043136 870 DESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 870 ~~~~~~~~Gt~~y~APE~~~~ 890 (902)
........||+.|+|||++.+
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~ 198 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDP 198 (318)
T ss_dssp ---------CCTTCCHHHHC-
T ss_pred CccccccCCCccccChhhccc
Confidence 555556789999999999854
No 338
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.89 E-value=1.3e-24 Score=237.76 Aligned_cols=175 Identities=23% Similarity=0.322 Sum_probs=143.4
Q ss_pred HHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhh---HHHHHHHHHHHHHHhcCC--cCeeEeEEeEEecC
Q 043136 708 LECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKEN---IRRRRGVLAEVDVLGNVR--HRNIVRLLGCCSNR 781 (902)
Q Consensus 708 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~---~~~~~~~~~Ei~il~~l~--h~nIv~l~~~~~~~ 781 (902)
....|.+.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|++++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 334567778999999999999965 568999999985432211 011234567999999985 59999999999999
Q ss_pred CeeEEEEEccCC-CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEc-CCCCEEEe
Q 043136 782 ECTMLLYEYMPN-GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLD-GEMEARVA 859 (902)
Q Consensus 782 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~-~~~~~kl~ 859 (902)
+..++|||++.+ ++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ .++.+||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEe
Confidence 999999999976 89999987643 3677888899999999999999776 99999999999999 78999999
Q ss_pred ecccceeccCCCCceeeccccCccccCccccc
Q 043136 860 DFGVAKLIQSDESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 860 DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
|||+++..... ......||+.|+|||++.+.
T Consensus 193 Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~ 223 (320)
T 3a99_A 193 DFGSGALLKDT-VYTDFDGTRVYSPPEWIRYH 223 (320)
T ss_dssp CCTTCEECCSS-CBCCCCSCGGGSCHHHHHHS
T ss_pred eCccccccccc-cccCCCCCccCCChHHhccC
Confidence 99999877543 33456799999999998654
No 339
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.89 E-value=1.1e-23 Score=233.78 Aligned_cols=174 Identities=23% Similarity=0.280 Sum_probs=141.2
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEeC-CC-cEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCe------eEeEEeE
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEMP-GG-EIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRN------IVRLLGC 777 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~-~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~n------Iv~l~~~ 777 (902)
+++...|.+.+.||+|+||.||+|... ++ +.||+|++... ....+.+.+|++++++++|++ ++.++++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence 334456777899999999999999764 34 68999998532 234456778999999887765 9999999
Q ss_pred EecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE-------
Q 043136 778 CSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL------- 850 (902)
Q Consensus 778 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl------- 850 (902)
+...+..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+||++
T Consensus 91 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 91 FNFHGHMCIAFELL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEE
T ss_pred eeeCCeEEEEEecc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccc
Confidence 99999999999999 6778777765432 24778889999999999999999665 9999999999999
Q ss_pred ------------cCCCCEEEeecccceeccCCCCceeeccccCccccCcccccc
Q 043136 851 ------------DGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 851 ------------~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
+.++.+||+|||+++..... ....+||+.|+|||++.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~ 215 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELG 215 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCC
T ss_pred cccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCC
Confidence 56789999999999875432 34468999999999997654
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=5.9e-24 Score=247.72 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=125.8
Q ss_pred ccccE-EecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcc
Q 043136 67 SWSGI-KCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPG 145 (902)
Q Consensus 67 ~w~Gv-~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 145 (902)
.|.|+ .|.. ++++.|+|++|+|++ +|+.+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|.
T Consensus 49 ~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~- 117 (571)
T 3cvr_A 49 AVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE- 117 (571)
T ss_dssp HHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-
T ss_pred hhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-
Confidence 79999 7864 379999999999987 777663 78999999999988 455 457888888888888887 665
Q ss_pred cccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc
Q 043136 146 ISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE 225 (902)
Q Consensus 146 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 225 (902)
+.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+
T Consensus 118 l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~ 183 (571)
T 3cvr_A 118 LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLE 183 (571)
T ss_dssp CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCC
T ss_pred hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCC
Confidence 554 77777777777776 444 46667777777777664 444 45666666666666664 554 44 5666
Q ss_pred EEEeeCcccCCCCChhccCCCCC-------CEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCC
Q 043136 226 RIEIGYNNLQGEVPVEFASLVNL-------KYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYG 291 (902)
Q Consensus 226 ~L~L~~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 291 (902)
+|+|++|+|+ .+|. |.. +| ++|+|++|+|+ .+|..+..+++|++|+|++|.+++.+|..+.
T Consensus 184 ~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 184 ALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp EEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred EEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 6666666666 3443 332 44 55555555555 3444444455555555555555444444433
No 341
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.89 E-value=1.5e-23 Score=234.44 Aligned_cols=170 Identities=21% Similarity=0.319 Sum_probs=139.2
Q ss_pred HhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-----------cCeeEeEEeE
Q 043136 710 CLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-----------HRNIVRLLGC 777 (902)
Q Consensus 710 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----------h~nIv~l~~~ 777 (902)
..|.+.+.||+|+||.||+|++ .+++.||||++... ....+.+.+|++++++++ ||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 3566778999999999999976 56899999998532 233456778999988876 8999999999
Q ss_pred EecCC----eeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEcCCCCCCEEEc-
Q 043136 778 CSNRE----CTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-CDPVIVHRDLKPSNILLD- 851 (902)
Q Consensus 778 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~~~~ivHrDlKp~NILl~- 851 (902)
+...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ + |+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEec
Confidence 87654 789999999 8999999976432 2367888899999999999999976 5 99999999999994
Q ss_pred -----CCCCEEEeecccceeccCCCCceeeccccCccccCcccccc
Q 043136 852 -----GEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFCFCF 892 (902)
Q Consensus 852 -----~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~~~ 892 (902)
..+.+||+|||+|+..... .....||+.|+|||++.+..
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~ 211 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAP 211 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCC
T ss_pred cCCCcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCC
Confidence 4457999999999876543 33457999999999997754
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=4.7e-23 Score=228.24 Aligned_cols=202 Identities=16% Similarity=0.105 Sum_probs=118.2
Q ss_pred CccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCc-
Q 043136 66 CSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPP- 144 (902)
Q Consensus 66 C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~- 144 (902)
|+|..|.|+. ++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 6787788853 3444 467655 36889999999999877667888899999999999988766554
Q ss_pred ccccccccce-eccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccC-CCccCCCCccccCCC
Q 043136 145 GISKLRFLRI-FNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAG-NSLTGSLPPQLGLLT 222 (902)
Q Consensus 145 ~l~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 222 (902)
.|.++++|+. +.++.|++++..|..|..+++|++|++++|+++...+..+....++..|++.+ |+++...+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4666666543 45555666666666666666666666666666655444455555555555543 344433333444432
Q ss_pred -CCcEEEeeCcccCCCCChhccCCCCCCEEEccC-ccCcccCCccccCCCCccEEecCCCccc
Q 043136 223 -QLERIEIGYNNLQGEVPVEFASLVNLKYMDISA-CNLSGTLPSEISNLTKLEMLLLFKNHFT 283 (902)
Q Consensus 223 -~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 283 (902)
.++.|+|++|+|+.+ |.......+|++|++++ |.++...++.|.++++|++|+|++|+|+
T Consensus 154 ~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 154 FESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 345555555555532 22222334455555543 3333222234445555555555555554
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=6.7e-23 Score=222.60 Aligned_cols=193 Identities=21% Similarity=0.325 Sum_probs=95.1
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
..+++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|++++|++++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 345566666666666654 22 45566666666666666654332 55555555555555555542 23555555555
Q ss_pred EeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccC
Q 043136 179 LNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNL 258 (902)
Q Consensus 179 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 258 (902)
|+|++|++++. +. +..+++|++|+|++|++++..+ ++.+++|++|++++|++++..+ +..+++|++|+|++|++
T Consensus 112 L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 55555555532 21 4555555555555555553221 4445555555555555543222 44445555555555554
Q ss_pred cccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCc
Q 043136 259 SGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|.++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 43222 4444444444444444443321 344444444444444443
No 344
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.89 E-value=2.2e-24 Score=235.80 Aligned_cols=169 Identities=22% Similarity=0.378 Sum_probs=135.2
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEecCCeeEEEEEcc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
|...+.||+|+||.||+|+..+ .+|+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~ 111 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC 111 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence 5567899999999999998744 4899988543221 122344678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccceeccC--
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQS-- 869 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~~~-- 869 (902)
++++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++ ++.+||+|||+++....
T Consensus 112 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 112 KGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred cCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999986532 24677888899999999999999776 99999999999998 67999999999876531
Q ss_pred ----CCCceeeccccCccccCccccc
Q 043136 870 ----DESMSVIAGSYGYIAPGTFCFC 891 (902)
Q Consensus 870 ----~~~~~~~~Gt~~y~APE~~~~~ 891 (902)
........||+.|+|||++.+.
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~ 209 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQL 209 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCB
T ss_pred ccccccccccCCCcccccChHHhhhc
Confidence 1223345699999999999763
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=7.8e-23 Score=208.76 Aligned_cols=157 Identities=23% Similarity=0.249 Sum_probs=94.9
Q ss_pred CCCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 64 VWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 64 ~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
..|.|.+|.|+... ++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 5 C~C~~~~v~c~~~~------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQG------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSSC------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCCC------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 35899999997542 22 244333 4578888888888887666677788888888888887776555
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQ 223 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 223 (902)
..|+.+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 55566666666666666666555545555555555555555555444444555555555555555555433333444444
Q ss_pred CcEEEeeCcccC
Q 043136 224 LERIEIGYNNLQ 235 (902)
Q Consensus 224 L~~L~L~~N~l~ 235 (902)
|++|++++|.+.
T Consensus 150 L~~L~l~~N~~~ 161 (208)
T 2o6s_A 150 LQYIWLHDNPWD 161 (208)
T ss_dssp CCEEECCSCCBC
T ss_pred ccEEEecCCCee
Confidence 444444444433
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.2e-22 Score=220.72 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=102.3
Q ss_pred hhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCC
Q 043136 122 ILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLR 201 (902)
Q Consensus 122 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 201 (902)
+..+++|++|++++|.++. +| .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. + .+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4556677777777776654 23 35555555555555555554333 55555555555555555432 2 344555555
Q ss_pred EEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCc
Q 043136 202 FLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNH 281 (902)
Q Consensus 202 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 281 (902)
+|+|++|++++ +| . +..+++|++|++++|++++..+ +..+++|++|+|++|+
T Consensus 111 ~L~l~~n~l~~-~~-~------------------------l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 162 (308)
T 1h6u_A 111 TLDLTSTQITD-VT-P------------------------LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQ 162 (308)
T ss_dssp EEECTTSCCCC-CG-G------------------------GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-ch-h------------------------hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCc
Confidence 55555555543 22 1 4444555555555555543322 4445555555555555
Q ss_pred cceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCceecc
Q 043136 282 FTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNHLTG 356 (902)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 356 (902)
+++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++.+..+ +..+++|+.|++++|.+++
T Consensus 163 l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 163 VSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 543222 4555555555555555554322 5555556666666666554332 5556666666666666654
No 347
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.88 E-value=6.7e-23 Score=220.09 Aligned_cols=154 Identities=11% Similarity=0.041 Sum_probs=130.8
Q ss_pred CCHHH-HHHHhccCCcEeeecCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe
Q 043136 702 FTADD-VLECLSMSDKILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS 779 (902)
Q Consensus 702 ~~~~~-~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~ 779 (902)
+..++ ++...|.+.+.||+|+||.||+|++. +++.||+|++...........+.+.+|++++.+++||||+++++++.
T Consensus 22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 101 (286)
T 3uqc_A 22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH 101 (286)
T ss_dssp CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE
Confidence 34444 55566778899999999999999775 48999999997655444556677899999999999999999999999
Q ss_pred cCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEe
Q 043136 780 NRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVA 859 (902)
Q Consensus 780 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~ 859 (902)
+.+..|+||||++|++|.++++.. .......+|+.|++.||+|||+++ |+||||||+||+++.++.+||+
T Consensus 102 ~~~~~~lv~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~ 171 (286)
T 3uqc_A 102 TRAGGLVVAEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLA 171 (286)
T ss_dssp ETTEEEEEEECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEEC
T ss_pred ECCcEEEEEEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEE
Confidence 999999999999999999998532 133456789999999999999776 9999999999999999999999
Q ss_pred ecccce
Q 043136 860 DFGVAK 865 (902)
Q Consensus 860 DFGla~ 865 (902)
++|...
T Consensus 172 ~~~~~~ 177 (286)
T 3uqc_A 172 YPATMP 177 (286)
T ss_dssp SCCCCT
T ss_pred eccccC
Confidence 887653
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.6e-22 Score=218.98 Aligned_cols=240 Identities=14% Similarity=0.086 Sum_probs=139.8
Q ss_pred CEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCc-hhhhcccCCcE-Eecc
Q 043136 105 THLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLP-LEFVQLNSLQQ-LNLG 182 (902)
Q Consensus 105 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 182 (902)
++++.++++++ .+|..+ .+++++|+|++|+|+...+..|+++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45677777777 355544 3567888888888876555567777777777777777765544 35666666554 4555
Q ss_pred CccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeC-cccCCCCChhccCCC-CCCEEEccCccCcc
Q 043136 183 GSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGY-NNLQGEVPVEFASLV-NLKYMDISACNLSG 260 (902)
Q Consensus 183 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 260 (902)
+|+++...|..|.++++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .+++|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 6677666666677777777777777777655555555556666666654 455544455555553 46666666666663
Q ss_pred cCCccccCCCCccEEecCC-CccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhh
Q 043136 261 TLPSEISNLTKLEMLLLFK-NHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIE 339 (902)
Q Consensus 261 ~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 339 (902)
. |......++|++|++++ |.++...+..|.++++|++|||++|+|+...+..|. +|+.|.+.++.-...+| .+.
T Consensus 169 i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP-~l~ 243 (350)
T 4ay9_X 169 I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLP-TLE 243 (350)
T ss_dssp E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCC-CTT
T ss_pred C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCC-Cch
Confidence 3 33333445666666653 445433334556666666666666666643333333 33344433332223334 244
Q ss_pred hccccceEEecCc
Q 043136 340 LLADLDTLLLWNN 352 (902)
Q Consensus 340 ~l~~L~~L~L~~N 352 (902)
.+++|+.++++++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 4455555554443
No 349
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.86 E-value=2.2e-22 Score=227.95 Aligned_cols=169 Identities=21% Similarity=0.233 Sum_probs=124.4
Q ss_pred CCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc-Ce---------------eEe---
Q 043136 714 SDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH-RN---------------IVR--- 773 (902)
Q Consensus 714 ~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h-~n---------------Iv~--- 773 (902)
..+.||+|+||.||+|++ .+++.||||++...........+.+.+|+.+++.++| ++ ++.
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 457899999999999975 5689999999864444443445678899999999976 21 111
Q ss_pred ---EEeEEec-----CCeeEEEEEccCCCCHHHHHHhhc--cCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCC
Q 043136 774 ---LLGCCSN-----RECTMLLYEYMPNGNLDDLLHAKN--KGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDL 843 (902)
Q Consensus 774 ---l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDl 843 (902)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.|+++||+|||+++ ||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 1111111 12456777766 789999985321 112335677888999999999999999776 999999
Q ss_pred CCCCEEEcCCCCEEEeecccceeccCCCCceeeccccCccccCccc
Q 043136 844 KPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPGTFC 889 (902)
Q Consensus 844 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~ 889 (902)
||+|||++.++.+||+|||+++..... ....+| +.|||||++.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~ 280 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTA 280 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc--cccCCC-CceeCchhhh
Confidence 999999999999999999999875433 445678 9999999994
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.2e-21 Score=228.31 Aligned_cols=189 Identities=23% Similarity=0.343 Sum_probs=120.9
Q ss_pred CCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEcc
Q 043136 127 KLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLA 206 (902)
Q Consensus 127 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 206 (902)
+|++|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666654 444432 45666666666655 344 335666666777666665 555 444 67777777
Q ss_pred CCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceec
Q 043136 207 GNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEI 286 (902)
Q Consensus 207 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 286 (902)
+|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777765 554 46667777777777765 443 45677777777777775 555 44 67777777777777 45
Q ss_pred CCCCCCcCcC-------cEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccc
Q 043136 287 PVSYGNLQAL-------QVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLAD 343 (902)
Q Consensus 287 p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 343 (902)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 54 443 55 78888888887 46776777888888888888887777777766543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.8e-21 Score=198.66 Aligned_cols=152 Identities=21% Similarity=0.193 Sum_probs=78.6
Q ss_pred CEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCc
Q 043136 105 THLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGS 184 (902)
Q Consensus 105 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 184 (902)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 355666666653 23222 346666666666666554445555555555555555555544444555555555555555
Q ss_pred cCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCc
Q 043136 185 YFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLS 259 (902)
Q Consensus 185 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 259 (902)
++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 555444444455555555555555555443334444445555555555444444434444444444444444433
No 352
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.85 E-value=9.2e-22 Score=212.90 Aligned_cols=150 Identities=25% Similarity=0.403 Sum_probs=124.6
Q ss_pred HHHHHhccCCcEeeecCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHHH-hcCCcCeeEeEEeEEec---
Q 043136 706 DVLECLSMSDKILGMGSTGTVYKAEM-PGGEIIAVKKLWGKHKENIRRRRGVLAEVDVL-GNVRHRNIVRLLGCCSN--- 780 (902)
Q Consensus 706 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il-~~l~h~nIv~l~~~~~~--- 780 (902)
++...++...+.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++..
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 34444445558899999999999976 56899999998421 2355788887 55689999999999876
Q ss_pred -CCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcC---CCCE
Q 043136 781 -RECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDG---EMEA 856 (902)
Q Consensus 781 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~---~~~~ 856 (902)
....|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~ 159 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAIL 159 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCE
T ss_pred CCceEEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcE
Confidence 6778999999999999999976432 24788889999999999999999776 999999999999998 7899
Q ss_pred EEeecccceeccC
Q 043136 857 RVADFGVAKLIQS 869 (902)
Q Consensus 857 kl~DFGla~~~~~ 869 (902)
||+|||+|+....
T Consensus 160 kl~Dfg~a~~~~~ 172 (299)
T 3m2w_A 160 KLTDFGFAKETTG 172 (299)
T ss_dssp EECCCTTCEECTT
T ss_pred EEecccccccccc
Confidence 9999999987654
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=1.6e-22 Score=244.51 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=92.7
Q ss_pred CCChhhHHHHHHHHHhCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCccccEEecCCCCCEEEEEcCCCCcccccCccccC
Q 043136 21 NTLPLPLVSLLSIKASLKDPFNNSFHDWDATPAFSNPSSEQEPVWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRY 100 (902)
Q Consensus 21 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~~~~~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~ 100 (902)
+....+++||+++..+...+....-..|.... +..+.|.++.++. .+++.|+|.++.+.. ++..+
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~-- 192 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGDS----------TPSGTATNSAVST--PLTPKIELFANGKDE-ANQAL-- 192 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCCC----------CccccCCCceecC--CccceEEeeCCCCCc-chhhH--
Confidence 45667899999999887432111223443321 2357899998875 489999999999886 34333
Q ss_pred CCCCCEEEccCCCCcc---------cCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhh
Q 043136 101 LTSLTHLNLSANAFDG---------PLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFV 171 (902)
Q Consensus 101 l~~L~~L~Ls~n~l~~---------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 171 (902)
|+.++|+.|.|.+ ..+..+..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+
T Consensus 193 ---l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 267 (727)
T 4b8c_D 193 ---LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK 267 (727)
T ss_dssp --------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG
T ss_pred ---hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh
Confidence 3444555554443 33555666666666666666665 45555556666666666666666 5555666
Q ss_pred cccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCC-CCE
Q 043136 172 QLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVN-LKY 250 (902)
Q Consensus 172 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~ 250 (902)
.+++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..
T Consensus 268 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~ 345 (727)
T 4b8c_D 268 NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLI 345 (727)
T ss_dssp GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhH
Confidence 6666666666666665 45555666666666666666665 45555555666666666666665555555543221 122
Q ss_pred EEccCccCcccCC
Q 043136 251 MDISACNLSGTLP 263 (902)
Q Consensus 251 L~Ls~N~l~~~~p 263 (902)
|+|++|.+++.+|
T Consensus 346 l~l~~N~l~~~~p 358 (727)
T 4b8c_D 346 FYLRDNRPEIPLP 358 (727)
T ss_dssp HHHHHCCCCCCCC
T ss_pred HhhccCcccCcCc
Confidence 4555555555444
No 354
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.7e-21 Score=208.06 Aligned_cols=146 Identities=17% Similarity=0.103 Sum_probs=113.9
Q ss_pred cCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhH---------------HHHHHHHHHHHHHhcCCcCeeEeEEeE
Q 043136 713 MSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENI---------------RRRRGVLAEVDVLGNVRHRNIVRLLGC 777 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~---------------~~~~~~~~Ei~il~~l~h~nIv~l~~~ 777 (902)
.+.+.||+|+||.||+|...+++.||+|++........ .....+.+|++++++++| +++.++
T Consensus 93 ~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~ 169 (282)
T 1zar_A 93 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKV 169 (282)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCE
T ss_pred EecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeE
Confidence 34589999999999999887799999999853221100 245678899999999984 555555
Q ss_pred EecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEE
Q 043136 778 CSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEAR 857 (902)
Q Consensus 778 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~k 857 (902)
+.. +..|+||||++||+|.+ +.. + ....++.|+++|++|||+++ |+||||||+||+++ ++.+|
T Consensus 170 ~~~-~~~~lvmE~~~g~~L~~-l~~---------~--~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 170 YAW-EGNAVLMELIDAKELYR-VRV---------E--NPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp EEE-ETTEEEEECCCCEEGGG-CCC---------S--CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEE
T ss_pred Eec-cceEEEEEecCCCcHHH-cch---------h--hHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEE
Confidence 433 55799999999999988 421 1 12368999999999999776 99999999999999 99999
Q ss_pred EeecccceeccCCCCceeeccccCccccCcccc
Q 043136 858 VADFGVAKLIQSDESMSVIAGSYGYIAPGTFCF 890 (902)
Q Consensus 858 l~DFGla~~~~~~~~~~~~~Gt~~y~APE~~~~ 890 (902)
|+|||+|+. +..|+|||++..
T Consensus 233 l~DFG~a~~------------~~~~~a~e~l~r 253 (282)
T 1zar_A 233 IIDFPQSVE------------VGEEGWREILER 253 (282)
T ss_dssp ECCCTTCEE------------TTSTTHHHHHHH
T ss_pred EEECCCCeE------------CCCCCHHHHHHH
Confidence 999999864 345788988753
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=3.7e-23 Score=242.40 Aligned_cols=216 Identities=21% Similarity=0.196 Sum_probs=109.6
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
..+++|+.|+|++|+++ .+|..++.|++|+.|++++|......|. .+..+.+.+.+|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 34555555555555554 3455555555555555544431000000 00001144555666666666666
Q ss_pred Ee-ccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCcc
Q 043136 179 LN-LGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACN 257 (902)
Q Consensus 179 L~-L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 257 (902)
|+ ++.|.+. +|+.+.+++|.++.. |. ..|+.|+|++|+|++ +|. |+.+++|++|+|++|+
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 66 5555432 333444444444421 11 124555555555553 333 5555555555555555
Q ss_pred CcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCcccc-CccccccCCCCEEEccCccccccCCh
Q 043136 258 LSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPI-PASLASLKGLTRLSLMNNVLFGEIPQ 336 (902)
Q Consensus 258 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (902)
|+ .+|..|+++++|++|+|++|+|++ +| .++++++|++|+|++|+|++.. |..+..+++|+.|+|++|.+++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 55 445555555555555555555554 33 5555666666666666665554 55666666666666666666554432
Q ss_pred ---hhhhccccceEE
Q 043136 337 ---DIELLADLDTLL 348 (902)
Q Consensus 337 ---~~~~l~~L~~L~ 348 (902)
.+..+++|+.|+
T Consensus 552 ~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 552 QERLAEMLPSVSSIL 566 (567)
T ss_dssp TTHHHHHCTTCSEEE
T ss_pred HHHHHHHCcccCccC
Confidence 233456666664
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=6.6e-20 Score=189.87 Aligned_cols=157 Identities=21% Similarity=0.237 Sum_probs=96.9
Q ss_pred CCCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCC
Q 043136 64 VWCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFP 143 (902)
Q Consensus 64 ~~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 143 (902)
..|+|.+|.|+.. +++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+...+
T Consensus 17 ~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~ 81 (229)
T 3e6j_A 17 CSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPV 81 (229)
T ss_dssp CEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcCh
Confidence 3799999999643 232 4555443 778888888888887777777777777777777777765444
Q ss_pred cccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCC
Q 043136 144 PGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQ 223 (902)
Q Consensus 144 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 223 (902)
..|..+++|++|+|++|+|++. .+..|..+++|++|+|++|+|+ .+|..+..+++
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~l------------------------~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 136 (229)
T 3e6j_A 82 GVFDSLTQLTVLDLGTNQLTVL------------------------PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTH 136 (229)
T ss_dssp TTTTTCTTCCEEECCSSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTT
T ss_pred hhcccCCCcCEEECCCCcCCcc------------------------ChhHhCcchhhCeEeccCCccc-ccCcccccCCC
Confidence 4455555555555555555444 4444455555555555555555 44555555555
Q ss_pred CcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcc
Q 043136 224 LERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSG 260 (902)
Q Consensus 224 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 260 (902)
|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 137 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 137 LTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 5555555555555545556666666666666666654
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.1e-20 Score=199.80 Aligned_cols=172 Identities=23% Similarity=0.340 Sum_probs=87.8
Q ss_pred cCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcE
Q 043136 99 RYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQ 178 (902)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 178 (902)
..+++|++|++++|.++.. +.+..+++|++|+|++|++++..+ +..+++|++|++++|.+++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-------------- 104 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-------------- 104 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--------------
T ss_pred hhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC--------------
Confidence 3455555555555555533 235555555555555555554322 4444444444444444443
Q ss_pred EeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccC
Q 043136 179 LNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNL 258 (902)
Q Consensus 179 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 258 (902)
+| .+.++++|++|+|++|++++. +.+..+++|++|++++|++++. ..+..+++|++|+|++|++
T Consensus 105 -----------~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 105 -----------LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp -----------GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred -----------Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 11 244455555555555555432 2344555555555555555543 3455555555555555555
Q ss_pred cccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCcc
Q 043136 259 SGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSG 308 (902)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (902)
++..| +..+++|++|+|++|++++. | .+..+++|+.|++++|+++.
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 54333 55555555555555555532 2 25556666666666666553
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=5.3e-20 Score=216.87 Aligned_cols=170 Identities=26% Similarity=0.373 Sum_probs=73.6
Q ss_pred ccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEE
Q 043136 124 ELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFL 203 (902)
Q Consensus 124 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 203 (902)
.|++|+.|+|++|.+... | .++.+++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 344444444444444321 1 23344444444444444443322 4444444444444444443 11 34444444444
Q ss_pred EccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccc
Q 043136 204 DLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFT 283 (902)
Q Consensus 204 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 283 (902)
+|++|++++ + +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 444444443 1 2344444444444444444432 334444444444444444443333 444444444444444444
Q ss_pred eecCCCCCCcCcCcEEecccCCCc
Q 043136 284 GEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 284 ~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
+. ..+..+++|+.|+|++|+++
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEE
T ss_pred CC--hHHccCCCCCEEEccCCcCc
Confidence 32 12444444444444444444
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.7e-20 Score=199.14 Aligned_cols=188 Identities=24% Similarity=0.318 Sum_probs=152.6
Q ss_pred EEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCc
Q 043136 131 IDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSL 210 (902)
Q Consensus 131 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 210 (902)
+.+..+.+++.. .+..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++|++
T Consensus 29 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l 102 (291)
T 1h6t_A 29 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKV 102 (291)
T ss_dssp HHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred HHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcC
Confidence 344444444321 234555566666666666543 2 47778889999999999986554 89999999999999999
Q ss_pred cCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCC
Q 043136 211 TGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSY 290 (902)
Q Consensus 211 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 290 (902)
++ + +.+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|++++..| +
T Consensus 103 ~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l 174 (291)
T 1h6t_A 103 KD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L 174 (291)
T ss_dssp CC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--h
Confidence 85 3 3599999999999999999974 5689999999999999999965 678999999999999999997655 8
Q ss_pred CCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccC
Q 043136 291 GNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEI 334 (902)
Q Consensus 291 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 334 (902)
..+++|++|+|++|++++ ++ .+..+++|+.|++++|++....
T Consensus 175 ~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 175 AGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp TTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred cCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 999999999999999986 44 4899999999999999997643
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.1e-20 Score=218.85 Aligned_cols=173 Identities=28% Similarity=0.353 Sum_probs=85.7
Q ss_pred hcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCE
Q 043136 171 VQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKY 250 (902)
Q Consensus 171 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 250 (902)
..+++|+.|+|++|.+.. +| .+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|++. | .+..+++|++
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCCE
Confidence 344444444444444442 12 24444555555555555543222 44455555555555555431 2 3455555555
Q ss_pred EEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccc
Q 043136 251 MDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVL 330 (902)
Q Consensus 251 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 330 (902)
|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|++
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 55555555532 2345555555555555555533 344555555555555555554444 55555555555555555
Q ss_pred cccCChhhhhccccceEEecCceeccc
Q 043136 331 FGEIPQDIELLADLDTLLLWNNHLTGV 357 (902)
Q Consensus 331 ~~~~p~~~~~l~~L~~L~L~~N~l~~~ 357 (902)
.+. +.+..+++|+.|+|++|.+++.
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCC--hHHccCCCCCEEEccCCcCcCC
Confidence 432 2355555555555555555543
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.7e-19 Score=185.42 Aligned_cols=152 Identities=24% Similarity=0.247 Sum_probs=102.8
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCc-hhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQ-PAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSN 160 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 160 (902)
.+++++|+++. +|..+. +.+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 56777778774 676553 456889999988887754 45778888888888888888766666777777777777777
Q ss_pred cccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCC
Q 043136 161 SFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQG 236 (902)
Q Consensus 161 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 236 (902)
++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 7766666666666666666666666666556666666666666666666665555555555555555555555543
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.1e-19 Score=187.03 Aligned_cols=149 Identities=25% Similarity=0.271 Sum_probs=88.0
Q ss_pred EcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceecccccccc
Q 043136 84 DLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFT 163 (902)
Q Consensus 84 ~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 163 (902)
++++++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|+
T Consensus 17 ~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 17 DCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp ECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred EcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 33445555 4565543 67888888888887766667777777777777777777665666666665555555555555
Q ss_pred CCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhcc
Q 043136 164 GPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFA 243 (902)
Q Consensus 164 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 243 (902)
+..+..|..+++|++|+|++|+ +++..|..|..+++|++|+|++|+|++..+..|.
T Consensus 94 ~l~~~~f~~l~~L~~L~L~~N~------------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 94 ELPKSLFEGLFSLQLLLLNANK------------------------INCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSC------------------------CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccCHhHccCCCCCCEEECCCCC------------------------CCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 4444444444445555554444 4444444455555555555555555544444555
Q ss_pred CCCCCCEEEccCccCc
Q 043136 244 SLVNLKYMDISACNLS 259 (902)
Q Consensus 244 ~l~~L~~L~Ls~N~l~ 259 (902)
.+++|++|+|++|.+.
T Consensus 150 ~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TCTTCCEEECCSSCEE
T ss_pred CCCCCCEEEeCCCCcC
Confidence 5555555555555554
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.7e-19 Score=200.51 Aligned_cols=176 Identities=28% Similarity=0.301 Sum_probs=122.8
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCcccc-CCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccC
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLG-LLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISA 255 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 255 (902)
+.+++++|.++ .+|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46666666666 3555443 3467777777777766666666 777777777777777766667777777777777777
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccc---cccCCCCEEEccCccccc
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASL---ASLKGLTRLSLMNNVLFG 332 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~L~~N~l~~ 332 (902)
|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 77776666677777777777777777777777777777788888888887775444444 457777777777777776
Q ss_pred cCChhhhhccc--cceEEecCceec
Q 043136 333 EIPQDIELLAD--LDTLLLWNNHLT 355 (902)
Q Consensus 333 ~~p~~~~~l~~--L~~L~L~~N~l~ 355 (902)
..+..+..++. ++.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 55556666655 366666666664
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.7e-19 Score=184.00 Aligned_cols=156 Identities=21% Similarity=0.247 Sum_probs=110.0
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCC-ccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccC
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLP-PQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISA 255 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 255 (902)
+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46666666665 3454442 345677777777775544 3467777777777777777766666777777777777777
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCC
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIP 335 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (902)
|++++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77776666667777777777777777777767777777777777777777777777777777777777777777765443
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5.5e-22 Score=232.47 Aligned_cols=202 Identities=21% Similarity=0.148 Sum_probs=157.5
Q ss_pred ccccceeccccccccCCCchhhhcccCCcEEeccCcc-------------CcCCCCcccCCCCCCCEEE-ccCCCccCCC
Q 043136 149 LRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSY-------------FDGEIPSDYRNLSSLRFLD-LAGNSLTGSL 214 (902)
Q Consensus 149 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~ 214 (902)
++.|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 344444444444443 344445555555555544443 4566777788888888888 6666543
Q ss_pred CccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcC
Q 043136 215 PPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQ 294 (902)
Q Consensus 215 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 294 (902)
+|..+.+++|.|+...+ ..|++|+|++|+|++ +|. |.++++|++|+|++|+|+ .+|..+++++
T Consensus 424 --------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 --------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred --------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 46667778888874332 248999999999996 676 999999999999999999 7899999999
Q ss_pred cCcEEecccCCCccccCccccccCCCCEEEccCccccccC-ChhhhhccccceEEecCceeccccCcc---ccCCCceeE
Q 043136 295 ALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEI-PQDIELLADLDTLLLWNNHLTGVLPQK---LGSNGKLLT 370 (902)
Q Consensus 295 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~~~~L~~ 370 (902)
+|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.+ |..++.+++|+.|+|++|.|++.+|.. +..+++|+.
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~ 564 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSE
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCc
Confidence 99999999999997 67 8999999999999999999887 999999999999999999999876643 334788888
Q ss_pred EEe
Q 043136 371 VDV 373 (902)
Q Consensus 371 L~L 373 (902)
|++
T Consensus 565 L~l 567 (567)
T 1dce_A 565 ILT 567 (567)
T ss_dssp EEC
T ss_pred cCC
Confidence 874
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.6e-20 Score=202.44 Aligned_cols=174 Identities=21% Similarity=0.227 Sum_probs=88.8
Q ss_pred EEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhh-ccCCCcEEEccCCCCCCCCCcccccccccceeccccc
Q 043136 82 SLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAIL-ELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSN 160 (902)
Q Consensus 82 ~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 160 (902)
.+++++++|+. +|..+. +.++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 46667777763 565443 3467777777777766666665 6666666666666666554444555555555554444
Q ss_pred cccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCCh
Q 043136 161 SFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPV 240 (902)
Q Consensus 161 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 240 (902)
+|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+.
T Consensus 99 ~l~~~~~~------------------------~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 99 HLHTLDEF------------------------LFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp CCCEECTT------------------------TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred cCCcCCHH------------------------HhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 44443333 344444444444444444444444444444444444444444433223
Q ss_pred hc---cCCCCCCEEEccCccCcccCCccccCCCC--ccEEecCCCcc
Q 043136 241 EF---ASLVNLKYMDISACNLSGTLPSEISNLTK--LEMLLLFKNHF 282 (902)
Q Consensus 241 ~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l 282 (902)
.| ..+++|++|+|++|+|++..+..+..++. |+.|+|++|.+
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 33 33455555555555555333334444433 23344444433
No 367
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.6e-19 Score=183.05 Aligned_cols=152 Identities=21% Similarity=0.333 Sum_probs=92.9
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+.+++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3444332 45666666666666555555666666666666666666555666666666666666666
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccc
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLF 331 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (902)
+|+...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666544445566666666666666666665666666666666666666666655556666666666666666654
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=2.3e-18 Score=178.22 Aligned_cols=156 Identities=24% Similarity=0.276 Sum_probs=108.1
Q ss_pred CcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccC
Q 043136 176 LQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISA 255 (902)
Q Consensus 176 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 255 (902)
.+.++.+++.+. .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4444332 6677777777777766666677777777777777777655556667777777777777
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCC
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIP 335 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (902)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777666666677777777777777777 566677777777777777777776666667777777777777777765443
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=2.1e-19 Score=190.19 Aligned_cols=167 Identities=24% Similarity=0.288 Sum_probs=72.7
Q ss_pred cccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEe
Q 043136 150 RFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEI 229 (902)
Q Consensus 150 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 229 (902)
.++..++++.|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++.. . +..+++|++|++
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~-~-l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLS-P-LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCCh-h-hccCCCCCEEEC
Confidence 33444444444443222 34444444444444444442 22 3444444444444444444322 2 444444444444
Q ss_pred eCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccc
Q 043136 230 GYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGP 309 (902)
Q Consensus 230 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 309 (902)
++|++++. |. +.. ++|++|+|++|++++. + .+..+++|++|+|++|++++. + .+..+++|++|+|++|++++.
T Consensus 93 ~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 93 NRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCCc-Cc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 44444432 11 111 4444555555544432 1 244444444444444444432 1 344444444444444444433
Q ss_pred cCccccccCCCCEEEccCcccc
Q 043136 310 IPASLASLKGLTRLSLMNNVLF 331 (902)
Q Consensus 310 ~p~~l~~l~~L~~L~L~~N~l~ 331 (902)
..+..+++|+.|++++|.+.
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEE
T ss_pred --HHhccCCCCCEEeCCCCccc
Confidence 33444444444444444443
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=3.8e-20 Score=223.65 Aligned_cols=200 Identities=21% Similarity=0.259 Sum_probs=83.1
Q ss_pred EecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccC
Q 043136 372 DVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLS 451 (902)
Q Consensus 372 ~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 451 (902)
+++.|++. ..|..+..+..|+.|+|++|++. .+|..+..+++|+.|+|++|.|+ .+|..|+.+++|++|||++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444444 34455555555666666666555 45555556666666666666666 56666666666666666666666
Q ss_pred CCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCccCCCcccccccc--cccEEeccCccccccCCccc
Q 043136 452 GEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKLTGKIPDFIGCK--SIYKIELHNNLLNGSIPWDI 529 (902)
Q Consensus 452 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~--~l~~l~Ls~N~l~g~ip~~~ 529 (902)
.+|..|+++++|++|+|++|.|+ .+|..|+.+++|+.|+|++|++++.+|..+... ....++|++|.++|.+|.+
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 55666666666666666666664 455556666666666666666665555544311 1122445555555544432
Q ss_pred cccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCCCCCcCCccceeecccCCcccccCC
Q 043136 530 GHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIPSNFENCSTLESFNVSYNLLTGPIP 598 (902)
Q Consensus 530 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip 598 (902)
|..|++++|.- . ....+.|++.++..+.++..+....+++|-+.+...
T Consensus 361 -----l~~l~l~~n~~---~-------------~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~ 408 (727)
T 4b8c_D 361 -----RRFIEINTDGE---P-------------QREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYA 408 (727)
T ss_dssp --------------------------------------------------------------CCCGGGC
T ss_pred -----cceeEeecccc---c-------------ccccCCccccccchhhcccccceeeeeccccccccC
Confidence 23333443300 0 000114444455556666677777778887765444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=2.5e-19 Score=189.55 Aligned_cols=151 Identities=23% Similarity=0.287 Sum_probs=87.4
Q ss_pred cccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCc
Q 043136 146 ISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLE 225 (902)
Q Consensus 146 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 225 (902)
+..+++|+.|++++|.++. +| .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +|... . ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-Cccc
Confidence 3334444444444444432 22 34555555555555555554333 5556666666666666653 33222 2 5666
Q ss_pred EEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCC
Q 043136 226 RIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQ 305 (902)
Q Consensus 226 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 305 (902)
+|++++|+|++. ..+..+++|++|+|++|++++. + .+..+++|++|+|++|++++. ..+..+++|+.|++++|.
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 666666666643 2466667777777777777643 3 566677777777777777654 556677777777777777
Q ss_pred Cccc
Q 043136 306 LSGP 309 (902)
Q Consensus 306 l~~~ 309 (902)
+++.
T Consensus 184 ~~~~ 187 (263)
T 1xeu_A 184 CVNE 187 (263)
T ss_dssp EECC
T ss_pred ccCC
Confidence 7654
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.6e-18 Score=174.98 Aligned_cols=152 Identities=19% Similarity=0.271 Sum_probs=92.0
Q ss_pred hcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCE
Q 043136 171 VQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKY 250 (902)
Q Consensus 171 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 250 (902)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55666666666666666 344 4666666666666666554 2335666666666666666666655666666666666
Q ss_pred EEccCccCcccCCccccCCCCccEEecCCCc-cceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcc
Q 043136 251 MDISACNLSGTLPSEISNLTKLEMLLLFKNH-FTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNV 329 (902)
Q Consensus 251 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 329 (902)
|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 6666666665555666666666666666665 43 333 45556666666666666654 22 45555666666666665
Q ss_pred c
Q 043136 330 L 330 (902)
Q Consensus 330 l 330 (902)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 5
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.7e-18 Score=174.85 Aligned_cols=132 Identities=16% Similarity=0.212 Sum_probs=67.5
Q ss_pred hhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCC
Q 043136 170 FVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLK 249 (902)
Q Consensus 170 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 249 (902)
+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..++.+++|++|++++|++++..|..+..+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 333444444444444332 122344455555555555555544455555555555555555555555555555555566
Q ss_pred EEEccCcc-CcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCc
Q 043136 250 YMDISACN-LSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 250 ~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
+|+|++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|++|++++|++.
T Consensus 140 ~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 140 SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666555 33 333 45556666666666666653 22 4555666666666666654
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.1e-17 Score=168.12 Aligned_cols=132 Identities=20% Similarity=0.222 Sum_probs=71.3
Q ss_pred cEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCC-cCcccCcCceecccccccCCCcChhhhcccccceeccCC
Q 043136 417 SRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPR-DLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASS 495 (902)
Q Consensus 417 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 495 (902)
+.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666664 45554432 566666666666544443 255555555555555555544444444444333333333
Q ss_pred CccCCCcccccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcccccCC
Q 043136 496 SKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFLTGTIP 574 (902)
Q Consensus 496 N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 574 (902)
|+|++..|..|+.+++|++|+|++|+|++.+|..++.+++|+.|+|++|.+++..+
T Consensus 88 -----------------------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 -----------------------NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp -----------------------CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred -----------------------CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 33333444445555666666666666666666666666666666666666665443
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=6.3e-18 Score=178.23 Aligned_cols=140 Identities=19% Similarity=0.169 Sum_probs=104.8
Q ss_pred cCCcEeeecCceEEEEEEe-CCCcE--EEEEEecccchh---------------------hHHHHHHHHHHHHHHhcCCc
Q 043136 713 MSDKILGMGSTGTVYKAEM-PGGEI--IAVKKLWGKHKE---------------------NIRRRRGVLAEVDVLGNVRH 768 (902)
Q Consensus 713 ~~~~~iG~G~~g~Vy~~~~-~~~~~--vavK~i~~~~~~---------------------~~~~~~~~~~Ei~il~~l~h 768 (902)
.+.+.||+|+||.||+|.. .+|+. ||||++...... .......+.+|++++.++.|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999999999987 67888 999987432111 11223467889999999987
Q ss_pred Cee--EeEEeEEecCCeeEEEEEccCC-C----CHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHH-hCCCCCeEE
Q 043136 769 RNI--VRLLGCCSNRECTMLLYEYMPN-G----NLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLH-HDCDPVIVH 840 (902)
Q Consensus 769 ~nI--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~~~~ivH 840 (902)
+++ +..+++ +..++||||+.+ | +|.++.... ++.....++.|++.|++||| +.+ |||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~--------~~~~~~~i~~qi~~~l~~lH~~~g---ivH 194 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGREL--------KELDVEGIFNDVVENVKRLYQEAE---LVH 194 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGG--------GGSCHHHHHHHHHHHHHHHHHTSC---EEC
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhcc--------ChHHHHHHHHHHHHHHHHHHHHCC---EEe
Confidence 753 444443 357899999942 3 676654321 12234578999999999999 776 999
Q ss_pred cCCCCCCEEEcCCCCEEEeecccceeccC
Q 043136 841 RDLKPSNILLDGEMEARVADFGVAKLIQS 869 (902)
Q Consensus 841 rDlKp~NILl~~~~~~kl~DFGla~~~~~ 869 (902)
|||||+|||++. .++|+|||+|.....
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCCC
Confidence 999999999998 999999999987643
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.6e-18 Score=190.07 Aligned_cols=292 Identities=16% Similarity=0.136 Sum_probs=174.2
Q ss_pred cccCcccc--CCCCCCEEEccCCCCcccCchhhhc-cCCCcEEEccCCCCC--CCCCcccccccccceeccccccccCCC
Q 043136 92 GPIPPEIR--YLTSLTHLNLSANAFDGPLQPAILE-LTKLRTIDISHNSFN--STFPPGISKLRFLRIFNAYSNSFTGPL 166 (902)
Q Consensus 92 g~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~ 166 (902)
|.++..+. .+.++++|.++++ +....-..+.. +++|++|||++|++. ...+. .++.++.+.+..|.+ .
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---P 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---C
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---C
Confidence 33444444 3678888888864 22222234444 788999999999887 22222 222345555555533 2
Q ss_pred chhhhc--------ccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcc----c
Q 043136 167 PLEFVQ--------LNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNN----L 234 (902)
Q Consensus 167 p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~----l 234 (902)
+..|.+ +++|++|+|.+ .++..-+.+|.++++|+.|++++|.++...+.+|..+.++..+.++.+. .
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 345666 88888888888 7776666778888888888888888876777778877777776665532 2
Q ss_pred CCCCChhccCCCCCC-EEEccCccCcccCCccc----cCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccc
Q 043136 235 QGEVPVEFASLVNLK-YMDISACNLSGTLPSEI----SNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGP 309 (902)
Q Consensus 235 ~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 309 (902)
......+|.++..|+ .+++.... .++..+ ....+++.+.+.++-...........+++|+.|+|++|+++.+
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred ccccccccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 333344566666666 44443321 111111 1233444444443311110000011256666666666666655
Q ss_pred cCccccccCCCCEEEccCccccccCChhhhhccccc-eEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccC
Q 043136 310 IPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLD-TLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICD 388 (902)
Q Consensus 310 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 388 (902)
.+..|.++++|+.|+|.+| +....+..|..+.+|+ .+++.+ +++.+.+..|..+.+|+.++++.|+++...+..|.+
T Consensus 242 ~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~ 319 (329)
T 3sb4_A 242 PDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGN 319 (329)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCT
T ss_pred cHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcC
Confidence 5556666666666666666 5545555666666676 677666 566566667777777777777777777666667777
Q ss_pred CCCccEEe
Q 043136 389 GDRLFKLI 396 (902)
Q Consensus 389 ~~~L~~L~ 396 (902)
+.+|+.++
T Consensus 320 ~~~L~~ly 327 (329)
T 3sb4_A 320 GVPSKLIY 327 (329)
T ss_dssp TCCCCEEE
T ss_pred Ccchhhhc
Confidence 77777665
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=6.7e-18 Score=185.05 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=66.7
Q ss_pred CCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCc-EEEccCCccCCCCCcccCCCCCCcEE
Q 043136 365 NGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLS-RLRIQDNQLNGSIPQGFGLLPNLTFM 443 (902)
Q Consensus 365 ~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 443 (902)
+++|+.+++++|+++...+..|.++.+|+.+++.+| ++..-+..|.+|++|+ .+++.+ +++..-+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344555555555555444444555555555555554 4444455677777777 777777 6665556778888888888
Q ss_pred EccCcccCCCCCCcCcccCcCceecc
Q 043136 444 DMSRNSLSGEIPRDLGNAQKLEYLNI 469 (902)
Q Consensus 444 ~Ls~N~l~~~~p~~~~~l~~L~~L~L 469 (902)
++++|+++...+.+|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88888887666677888888877753
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.6e-17 Score=164.23 Aligned_cols=131 Identities=28% Similarity=0.336 Sum_probs=65.7
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCc-cccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccC
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPP-QLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISA 255 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 255 (902)
+++++++|.++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|.+++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--------- 78 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS--------- 78 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCT---------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcc---------
Confidence 45566666554 44443322 555555555555543332 244455555555555555544444444444
Q ss_pred ccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccC
Q 043136 256 CNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEI 334 (902)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 334 (902)
+|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.+..
T Consensus 79 ---------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 79 ---------------HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp ---------------TCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred ---------------cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 4444444444444444444555555555555555555555555555555555555555554443
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=6.5e-17 Score=158.64 Aligned_cols=133 Identities=22% Similarity=0.234 Sum_probs=77.8
Q ss_pred CCCCCEEEccCCCCc-ccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEE
Q 043136 101 LTSLTHLNLSANAFD-GPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQL 179 (902)
Q Consensus 101 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 179 (902)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777777777776 56666667777777777777777654 556666666666666666666566666666666666
Q ss_pred eccCccCcCCC-CcccCCCCCCCEEEccCCCccCCCC---ccccCCCCCcEEEeeCcccC
Q 043136 180 NLGGSYFDGEI-PSDYRNLSSLRFLDLAGNSLTGSLP---PQLGLLTQLERIEIGYNNLQ 235 (902)
Q Consensus 180 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 235 (902)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666665432 1445555555555555555553222 23444444444444444433
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.1e-16 Score=156.86 Aligned_cols=131 Identities=24% Similarity=0.283 Sum_probs=64.1
Q ss_pred CCcEEeccCccCc-CCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEc
Q 043136 175 SLQQLNLGGSYFD-GEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDI 253 (902)
Q Consensus 175 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 253 (902)
+|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4444444444444 34444444444555555555554432 44444555555555555555444444444555555555
Q ss_pred cCccCcccC-CccccCCCCccEEecCCCccceecC---CCCCCcCcCcEEecccCCCc
Q 043136 254 SACNLSGTL-PSEISNLTKLEMLLLFKNHFTGEIP---VSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 254 s~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 307 (902)
++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 555554321 1445555555555555555553322 24555555555555555554
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3.4e-16 Score=154.88 Aligned_cols=132 Identities=27% Similarity=0.319 Sum_probs=78.5
Q ss_pred CCccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCc
Q 043136 65 WCSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPP 144 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 144 (902)
.|+|.+|.|+.. +++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+.
T Consensus 6 ~C~~~~l~~~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSK------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSS------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCC------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 478888888543 333 344333 36788888888888776666677777777777777777765555
Q ss_pred ccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCcc
Q 043136 145 GISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLT 211 (902)
Q Consensus 145 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 211 (902)
.++.+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.++
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 5555555555555555555544444455555555555555554433333444444444444444444
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1e-16 Score=153.75 Aligned_cols=109 Identities=22% Similarity=0.287 Sum_probs=63.0
Q ss_pred CCCCEEEccCCCCc-ccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEe
Q 043136 102 TSLTHLNLSANAFD-GPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLN 180 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 180 (902)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666666 55666666666666666666666654 4555556666666666666555555555566666666
Q ss_pred ccCccCcCC-CCcccCCCCCCCEEEccCCCccC
Q 043136 181 LGGSYFDGE-IPSDYRNLSSLRFLDLAGNSLTG 212 (902)
Q Consensus 181 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~ 212 (902)
+++|++++. .+..++++++|++|++++|.+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~ 127 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN 127 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc
Confidence 666655542 22444555555555555555543
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.7e-16 Score=152.23 Aligned_cols=126 Identities=23% Similarity=0.289 Sum_probs=64.5
Q ss_pred cCCcEEeccCccCc-CCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEE
Q 043136 174 NSLQQLNLGGSYFD-GEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMD 252 (902)
Q Consensus 174 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 252 (902)
++|++|++++|.++ +.+|..+..+++|++|+|++|++++. ..++.+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45556666666655 45555555566666666666665543 4455555555555555555554555555555555555
Q ss_pred ccCccCccc-CCccccCCCCccEEecCCCccceecC---CCCCCcCcCcEEec
Q 043136 253 ISACNLSGT-LPSEISNLTKLEMLLLFKNHFTGEIP---VSYGNLQALQVLDL 301 (902)
Q Consensus 253 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L 301 (902)
+++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 555555532 12344444444444444444443322 23334444444444
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=152.98 Aligned_cols=108 Identities=25% Similarity=0.378 Sum_probs=50.3
Q ss_pred CCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecc
Q 043136 223 QLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLS 302 (902)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 302 (902)
+|++|++++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444443 233344444444444444444444434444444444444444444444444444445555555555
Q ss_pred cCCCccccCccccccCCCCEEEccCcccc
Q 043136 303 DNQLSGPIPASLASLKGLTRLSLMNNVLF 331 (902)
Q Consensus 303 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (902)
+|+|++..+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55554444444555555555555555554
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=152.96 Aligned_cols=128 Identities=21% Similarity=0.275 Sum_probs=108.8
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+.+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 67888888887 5666543 58899999999998 67788888999999999999999888888899999999999999
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCcc
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSG 308 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 308 (902)
+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9988888888889999999999999987666678888999999999998864
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=5.8e-15 Score=165.33 Aligned_cols=264 Identities=11% Similarity=0.044 Sum_probs=127.9
Q ss_pred CCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEe
Q 043136 101 LTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLN 180 (902)
Q Consensus 101 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 180 (902)
+..++.+.+.+ .++.+...+|.++ +|+.++|..| ++..-...|.+ .+|+.+.+.. .++...+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35566666643 3444445555553 5666666554 44333334444 2355555443 33333344444444444444
Q ss_pred ccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcc
Q 043136 181 LGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSG 260 (902)
Q Consensus 181 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 260 (902)
|++|.++......|. .++|+.+.+.. .++.+...+|.++++|+.+++..| ++.
T Consensus 187 l~~n~l~~I~~~aF~-------------------------~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~ 239 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-------------------------YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VST 239 (401)
T ss_dssp CTTSCCSEECTTTTT-------------------------TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCE
T ss_pred cCCCcceEechhhEe-------------------------ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccC
Confidence 444444433333333 34444444442 243333444445555555555442 332
Q ss_pred cCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCc-----cccCccccccCCCCEEEccCccccccCC
Q 043136 261 TLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLS-----GPIPASLASLKGLTRLSLMNNVLFGEIP 335 (902)
Q Consensus 261 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (902)
+...+|.+ .+|+.+.+ .|.++...+..|.++++|+.+++.+|.+. ...+..|.++++|+.++|.+ .+.....
T Consensus 240 I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECT
T ss_pred cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhh
Confidence 33334444 44555555 23344344444555555555555554443 23344555555555555552 3444444
Q ss_pred hhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCC-CccEEeccCCc
Q 043136 336 QDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGD-RLFKLILFSNN 401 (902)
Q Consensus 336 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~-~L~~L~l~~N~ 401 (902)
..|..+.+|+.+.|..| ++.+....|..+ +|+.+++++|.+....+..|..++ .+..+++-.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 45555555666655433 444555556666 666666666665544444454442 45566555544
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.6e-15 Score=149.99 Aligned_cols=132 Identities=24% Similarity=0.289 Sum_probs=75.1
Q ss_pred CEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCC
Q 043136 201 RFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKN 280 (902)
Q Consensus 201 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 280 (902)
+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444455444 2333222 35555555555555444445555566666666666665444445556666666666666
Q ss_pred ccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCC
Q 043136 281 HFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIP 335 (902)
Q Consensus 281 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (902)
++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6665555555666666666666666665555555666666666776666665443
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=9.2e-15 Score=163.74 Aligned_cols=253 Identities=9% Similarity=0.049 Sum_probs=187.6
Q ss_pred cccccCccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchh
Q 043136 90 LSGPIPPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLE 169 (902)
Q Consensus 90 l~g~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 169 (902)
++..-..+|.+. +|+.++|..| ++.+...+|.++ +|+.++|.. .++..-+..|.++++|+.++++.|+++......
T Consensus 124 i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 124 VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT
T ss_pred cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh
Confidence 333334467775 7999999876 777777888884 799999986 777777788999999999999999999877777
Q ss_pred hhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCC
Q 043136 170 FVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLK 249 (902)
Q Consensus 170 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 249 (902)
|. ..+|+.+.|..+ +...-..+|.++++|+.+++..| ++..-..+|.+ .+|+.+.+ .|.++.+.+.+|.++++|+
T Consensus 200 F~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 200 FV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred Ee-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 87 689999999855 76666778999999999999875 66555667777 78999998 4557666678888888899
Q ss_pred EEEccCccCc-----ccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEE
Q 043136 250 YMDISACNLS-----GTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLS 324 (902)
Q Consensus 250 ~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 324 (902)
.+++.+|.+. ...+.+|.++++|+.++|. +.++......|.++++|+.++|..| ++..-+.+|.++ +|+.++
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~ 351 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVK 351 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEE
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEE
Confidence 9888887765 3445677777778887777 4466566667777777777777544 555556677777 777777
Q ss_pred ccCccccccCChhhhhcc-ccceEEecCcee
Q 043136 325 LMNNVLFGEIPQDIELLA-DLDTLLLWNNHL 354 (902)
Q Consensus 325 L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l 354 (902)
+++|.+....+..|..++ .+..|++..+.+
T Consensus 352 l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 352 VEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 777766544444444442 455555555443
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.9e-17 Score=167.19 Aligned_cols=127 Identities=24% Similarity=0.353 Sum_probs=58.3
Q ss_pred hhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCC
Q 043136 169 EFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNL 248 (902)
Q Consensus 169 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 248 (902)
.|..+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++|++|++++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44444444444444444443 33 4444444444444444444 344444444445555555554443 22 34444455
Q ss_pred CEEEccCccCcccCC-ccccCCCCccEEecCCCccceecCCC----------CCCcCcCcEEe
Q 043136 249 KYMDISACNLSGTLP-SEISNLTKLEMLLLFKNHFTGEIPVS----------YGNLQALQVLD 300 (902)
Q Consensus 249 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~L~~L~ 300 (902)
++|+|++|++++..+ ..+..+++|++|++++|.+++..|.. +..+++|+.||
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 555555555543211 23444555555555555554443332 44555555554
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=2.9e-17 Score=165.90 Aligned_cols=154 Identities=21% Similarity=0.229 Sum_probs=102.9
Q ss_pred hcccCCcEEeccCccCcCCCCc------ccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccC
Q 043136 171 VQLNSLQQLNLGGSYFDGEIPS------DYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFAS 244 (902)
Q Consensus 171 ~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 244 (902)
.....++.++++.+.++|.+|. .|..+++|++|+|++|++++ +| .+..+++|++|++++|+|+ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3344455555555555555444 67777777777777777775 55 6777777777777777777 45666666
Q ss_pred CCCCCEEEccCccCcccCCccccCCCCccEEecCCCccceecC-CCCCCcCcCcEEecccCCCccccCcc----------
Q 043136 245 LVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIP-VSYGNLQALQVLDLSDNQLSGPIPAS---------- 313 (902)
Q Consensus 245 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 313 (902)
+++|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 6777777777777775 34 56677777777777777774322 35667777777777777776665542
Q ss_pred ccccCCCCEEEccCcccc
Q 043136 314 LASLKGLTRLSLMNNVLF 331 (902)
Q Consensus 314 l~~l~~L~~L~L~~N~l~ 331 (902)
+..+++|+.|| +|.++
T Consensus 170 ~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHCSSCSEEC--CGGGT
T ss_pred HHhCCCcEEEC--CcccC
Confidence 66777777776 55554
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=2.4e-15 Score=164.39 Aligned_cols=139 Identities=11% Similarity=0.096 Sum_probs=99.6
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccch-----------------hhH--HHHHHHHHHHHHHhcCCcCee-
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHK-----------------ENI--RRRRGVLAEVDVLGNVRHRNI- 771 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~-----------------~~~--~~~~~~~~Ei~il~~l~h~nI- 771 (902)
|.+.+.||+|+||.||+|...+|+.||||++..... ... ..+....+|...+.++.+..+
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 566789999999999999988999999998742110 000 011223467777777754443
Q ss_pred -EeEEeEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCCeEEcCCCCCCEEE
Q 043136 772 -VRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILL 850 (902)
Q Consensus 772 -v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ivHrDlKp~NILl 850 (902)
.+.+++. ..++||||++|+++.++... + ....++.|++.++.|+|.++ ||||||||.|||+
T Consensus 177 vp~p~~~~----~~~LVME~i~G~~L~~l~~~---------~--~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl 238 (397)
T 4gyi_A 177 VPEPIAQS----RHTIVMSLVDALPMRQVSSV---------P--DPASLYADLIALILRLAKHG---LIHGDFNEFNILI 238 (397)
T ss_dssp CCCEEEEE----TTEEEEECCSCEEGGGCCCC---------S--CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred CCeeeecc----CceEEEEecCCccHhhhccc---------H--HHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEE
Confidence 3333322 24799999998887654211 1 12367889999999999776 9999999999999
Q ss_pred cCCC----------CEEEeecccceecc
Q 043136 851 DGEM----------EARVADFGVAKLIQ 868 (902)
Q Consensus 851 ~~~~----------~~kl~DFGla~~~~ 868 (902)
++++ .+.|+||+-+....
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred eCCCCcccccccccceEEEEeCCcccCC
Confidence 8776 38999999887654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.1e-15 Score=147.81 Aligned_cols=111 Identities=20% Similarity=0.164 Sum_probs=64.3
Q ss_pred ccccCCCCCCEEEccCCCCcccCchhhhccC-CCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhccc
Q 043136 96 PEIRYLTSLTHLNLSANAFDGPLQPAILELT-KLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLN 174 (902)
Q Consensus 96 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 174 (902)
+.+.++++|++|+|++|+++.. +. +..+. +|++|+|++|.+++. ..++.+++|++|++++|+|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 3456677777777777777743 33 44444 777777777777653 4556666666666666666554444445555
Q ss_pred CCcEEeccCccCcCCCCc--ccCCCCCCCEEEccCCCcc
Q 043136 175 SLQQLNLGGSYFDGEIPS--DYRNLSSLRFLDLAGNSLT 211 (902)
Q Consensus 175 ~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~ 211 (902)
+|++|+|++|+++ .+|. .+.++++|++|++++|.++
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 5555555555553 2333 4444455555555555444
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.4e-13 Score=154.51 Aligned_cols=330 Identities=14% Similarity=0.071 Sum_probs=174.7
Q ss_pred CccccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhccc
Q 043136 95 PPEIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLN 174 (902)
Q Consensus 95 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 174 (902)
..+|.++++|+++.|.. .++.+...+|.++++|+.++|..+ ++......|..++.|+.+.+..+ +......+|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 34677777788887764 366556667777777777777654 44444455666666666655433 3333344555554
Q ss_pred CCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEcc
Q 043136 175 SLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDIS 254 (902)
Q Consensus 175 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 254 (902)
.++......... .-..+|.++++|+.+.+.++..+ .-...|..+++|+.+++..| ++.+...+|.++..|+.+.+.
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 333333222221 12344555566666666544322 33344555555555555443 333334445555555555544
Q ss_pred CccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccC
Q 043136 255 ACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEI 334 (902)
Q Consensus 255 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 334 (902)
.+... +.+.+...++|+.+.+..+ ++......|.++..|+.+.+..+..+ .....|..+..++.+..
T Consensus 217 ~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~--------- 283 (394)
T 4fs7_A 217 NSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIY--------- 283 (394)
T ss_dssp TTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEE---------
T ss_pred CCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceecc---------
Confidence 43322 1222233344555544332 22222334444455555555444322 33334444444444444
Q ss_pred ChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccC
Q 043136 335 PQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCS 414 (902)
Q Consensus 335 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~ 414 (902)
..+.+. ...|..+.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|+
T Consensus 284 ---------------~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~ 343 (394)
T 4fs7_A 284 ---------------GSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT 343 (394)
T ss_dssp ---------------CSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT
T ss_pred ---------------Cceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC
Confidence 433321 233444555555555433 33333444555556666665432 4434456678888
Q ss_pred CCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCcee
Q 043136 415 SLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYL 467 (902)
Q Consensus 415 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 467 (902)
+|+.+++..| ++..-..+|.++++|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 344 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 344 SLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8888888776 66555668888888998888755 33 345678888888764
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=6.4e-15 Score=145.55 Aligned_cols=130 Identities=21% Similarity=0.219 Sum_probs=56.4
Q ss_pred CCCCCCCEEEccCCCccCCCCccccCCC-CCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCcc
Q 043136 195 RNLSSLRFLDLAGNSLTGSLPPQLGLLT-QLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLE 273 (902)
Q Consensus 195 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 273 (902)
.++++|++|+|++|+++. +|. +..+. +|++|++++|+|++. ..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 334444444444444442 222 22222 444444444444432 3344444555555555554433333334444444
Q ss_pred EEecCCCccceecCC--CCCCcCcCcEEecccCCCccccCc----cccccCCCCEEEccCccc
Q 043136 274 MLLLFKNHFTGEIPV--SYGNLQALQVLDLSDNQLSGPIPA----SLASLKGLTRLSLMNNVL 330 (902)
Q Consensus 274 ~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~l~~l~~L~~L~L~~N~l 330 (902)
+|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|. .+..+++|++||+++|.+
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 4444444443 2222 3444444445555554444 2232 244444444444444443
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=2.5e-13 Score=152.49 Aligned_cols=335 Identities=13% Similarity=0.063 Sum_probs=213.9
Q ss_pred CcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcc
Q 043136 114 FDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSD 193 (902)
Q Consensus 114 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 193 (902)
++.+...+|.++++|+.+.|..+ ++..-...|.++++|+.+++.++ ++..-..+|
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF----------------------- 113 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTF----------------------- 113 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTT-----------------------
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhh-----------------------
Confidence 34444566777777777777533 44433444555555555555433 332333344
Q ss_pred cCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCcc
Q 043136 194 YRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLE 273 (902)
Q Consensus 194 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 273 (902)
.++++|+.+.+..+ ++..-..+|.....++..... .+......+|.++++|+.+.+..+. .......|.++++|+
T Consensus 114 -~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~ 188 (394)
T 4fs7_A 114 -SGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLK 188 (394)
T ss_dssp -TTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCC
T ss_pred -cccccchhhcccCc-eeeecceeeecccccccccCc--cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCce
Confidence 44444444444332 222223334443322222211 1222334566777777777776543 324455677777777
Q ss_pred EEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEecCce
Q 043136 274 MLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLWNNH 353 (902)
Q Consensus 274 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 353 (902)
.+.+..| ++......|.++..|+.+.+..+... +........+|+.+.+..+ ++......|.....|+.+.+..+.
T Consensus 189 ~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 189 SIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp BCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred EEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 7777665 44455566777777777777666543 3333444567777777643 233344566777888888887765
Q ss_pred eccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCCCcc
Q 043136 354 LTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSIPQG 433 (902)
Q Consensus 354 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 433 (902)
.+ .....|..+..++.+....+.+. ...+..+.+|+.+.+..+ ++..-...|.++++|+.++|.++ ++..-..+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 43 56677888899999988877543 356778889999998765 66555677999999999999755 76555679
Q ss_pred cCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhccccccee
Q 043136 434 FGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKIL 491 (902)
Q Consensus 434 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 491 (902)
|.++.+|+.+++..| ++..-..+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999999999877 77666789999999999999866 32 345678888888764
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=8e-14 Score=136.69 Aligned_cols=108 Identities=20% Similarity=0.202 Sum_probs=85.5
Q ss_pred ceeccCCCccCCCcccccccccccEEeccCccccccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCc
Q 043136 489 KILSASSSKLTGKIPDFIGCKSIYKIELHNNLLNGSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNF 568 (902)
Q Consensus 489 ~~L~ls~N~l~~~~p~~~~~~~l~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 568 (902)
+.+++++|+++. +|..+ ..+++.|+|++|+|++..|..|+.+++|++|+|++|+|+++.|..|..+++|++|+|++|+
T Consensus 12 ~~l~~s~n~l~~-ip~~~-~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI-PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp TEEECTTSCCSS-CCSCC-CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEeCCCCcCc-cCccC-CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 445555555553 33322 2567778888888887778888899999999999999998888888999999999999999
Q ss_pred ccccCCCCCcCCccceeecccCCcccccCC
Q 043136 569 LTGTIPSNFENCSTLESFNVSYNLLTGPIP 598 (902)
Q Consensus 569 l~g~ip~~~~~l~~L~~l~ls~N~l~g~ip 598 (902)
|++..|..|.++++|++|+|++|++++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 997777779999999999999999887655
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.7e-13 Score=134.35 Aligned_cols=104 Identities=24% Similarity=0.288 Sum_probs=49.3
Q ss_pred CEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCC
Q 043136 201 RFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKN 280 (902)
Q Consensus 201 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 280 (902)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44555555554 2443332 44455555555555444444555555555555555555444444444444444444444
Q ss_pred ccceecCCCCCCcCcCcEEecccCCCc
Q 043136 281 HFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 281 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
+|++..+..|..+++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 444433334444444444444444443
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4e-13 Score=132.17 Aligned_cols=104 Identities=24% Similarity=0.319 Sum_probs=49.0
Q ss_pred CEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCCC
Q 043136 201 RFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFKN 280 (902)
Q Consensus 201 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 280 (902)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 44555555554 3444332 44555555555555444445555555555555555555433333444444444444444
Q ss_pred ccceecCCCCCCcCcCcEEecccCCCc
Q 043136 281 HFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 281 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 444333333444444444444444443
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=5.5e-13 Score=131.16 Aligned_cols=104 Identities=20% Similarity=0.280 Sum_probs=61.5
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4444432 55666666666666555556666666666666666666555555566666666666666
Q ss_pred cCcccCCccccCCCCccEEecCCCccc
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFT 283 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 283 (902)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544445666666666666666655
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=2.7e-14 Score=158.37 Aligned_cols=186 Identities=15% Similarity=0.137 Sum_probs=85.1
Q ss_pred CCCCEEEccCCCCcccCchhhhcc-----CCCcEEEccCCCCCCCCCccc-ccccccceeccccccccCCCchhhh----
Q 043136 102 TSLTHLNLSANAFDGPLQPAILEL-----TKLRTIDISHNSFNSTFPPGI-SKLRFLRIFNAYSNSFTGPLPLEFV---- 171 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~---- 171 (902)
++|++|+|++|.++......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.++......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777665444444333 566666666666654322222 2334555555555555433222222
Q ss_pred -cccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCC----CChhccCCC
Q 043136 172 -QLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGE----VPVEFASLV 246 (902)
Q Consensus 172 -~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~ 246 (902)
..++|++|+|++|.|+..-.. .++..+...++|++|+|++|.|+.. ++..+...+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred hcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 123444444444444321000 1222233444455555555554421 133444455
Q ss_pred CCCEEEccCccCccc----CCccccCCCCccEEecCCCccceecCCCCCC---cC--cCcEEe--cccCCCc
Q 043136 247 NLKYMDISACNLSGT----LPSEISNLTKLEMLLLFKNHFTGEIPVSYGN---LQ--ALQVLD--LSDNQLS 307 (902)
Q Consensus 247 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---l~--~L~~L~--Ls~N~l~ 307 (902)
+|++|+|++|.|+.. ++..+...++|++|+|++|.|+......+.. .. .|+.+. +..|.++
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 566666666666532 2233344566666666666665432222211 11 166666 6666665
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.1e-12 Score=144.67 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=80.7
Q ss_pred CccccEEecCCCCCEEEEEcCCCCcccccCccccCCCCCCEEEccC-CCCcccCchhhhccCCCcEEEccCCCCCCCCCc
Q 043136 66 CSWSGIKCNPKSSQITSLDLSRRSLSGPIPPEIRYLTSLTHLNLSA-NAFDGPLQPAILELTKLRTIDISHNSFNSTFPP 144 (902)
Q Consensus 66 C~w~Gv~c~~~~~~v~~L~L~~~~l~g~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 144 (902)
|.|.+|.|+.. |+|++ +|. |..+++|++|+|++ |.|++..+..|..|++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~-----------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSS-----------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCC-----------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 88877777432 15663 777 88889999999986 888888888888888888888888888887777
Q ss_pred ccccccccceeccccccccCCCchhhhcccCCcEEeccCccCc
Q 043136 145 GISKLRFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFD 187 (902)
Q Consensus 145 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 187 (902)
.|++|++|+.|+|++|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777777777777777777765555555554 666666666665
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2e-14 Score=159.35 Aligned_cols=184 Identities=17% Similarity=0.118 Sum_probs=112.4
Q ss_pred cCCCcEEEccCCCCCCCCCcccccc-----cccceeccccccccCCCchhhhcccCCcEEeccCccCcCCCCcccCCCCC
Q 043136 125 LTKLRTIDISHNSFNSTFPPGISKL-----RFLRIFNAYSNSFTGPLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSS 199 (902)
Q Consensus 125 l~~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 199 (902)
++.|++|+|++|.++......+... ++|+.|+|++|.++......+. ..+++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~-----------------------~~L~~ 127 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLL-----------------------PVFLR 127 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTH-----------------------HHHHT
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHH-----------------------HHHHh
Confidence 4567777777777764333222221 3455555555544322211111 22345
Q ss_pred CCEEEccCCCccCCCCccc-----cCCCCCcEEEeeCcccCC----CCChhccCCCCCCEEEccCccCccc----CCccc
Q 043136 200 LRFLDLAGNSLTGSLPPQL-----GLLTQLERIEIGYNNLQG----EVPVEFASLVNLKYMDISACNLSGT----LPSEI 266 (902)
Q Consensus 200 L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~ 266 (902)
|++|+|++|.|+..-...+ ...++|++|+|++|.|+. .++..+...++|++|+|++|.|+.. ++..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 5566666665553222222 234667788888887764 2345567889999999999999853 35567
Q ss_pred cCCCCccEEecCCCccceec----CCCCCCcCcCcEEecccCCCccccCccccccCC-----CCEEE--ccCcccc
Q 043136 267 SNLTKLEMLLLFKNHFTGEI----PVSYGNLQALQVLDLSDNQLSGPIPASLASLKG-----LTRLS--LMNNVLF 331 (902)
Q Consensus 267 ~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-----L~~L~--L~~N~l~ 331 (902)
...++|++|+|++|.|+... +..+...++|++|+|++|.|+......+..+.. |+.+. +..|.+.
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 78889999999999998532 334445689999999999998665555544322 66676 6666664
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=2.2e-10 Score=128.44 Aligned_cols=331 Identities=12% Similarity=0.101 Sum_probs=176.6
Q ss_pred ccccCCC-CCCEEEccCCCCcccCchhhhccCCCcEEEccCCC---CCCCCCcccccccccceeccccccccCCCchhhh
Q 043136 96 PEIRYLT-SLTHLNLSANAFDGPLQPAILELTKLRTIDISHNS---FNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFV 171 (902)
Q Consensus 96 ~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 171 (902)
.+|.+.+ .|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++..-...|..+..|+.+.+..+ ++......|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 4566664 5888888754 776777888899999999888764 55444566777788887777654 4445556777
Q ss_pred cccCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEE
Q 043136 172 QLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYM 251 (902)
Q Consensus 172 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 251 (902)
.+.+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-..+|.. .+|+.+.+..+-.. ....+|..+.+++..
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccccee
Confidence 8888888888644 33344556777788888887655 44333344543 56777777654332 445667777777776
Q ss_pred EccCccCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCcccc
Q 043136 252 DISACNLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLF 331 (902)
Q Consensus 252 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (902)
....+.... +...+..........+ ..+.....+..+.+. +.++..-..+|.++..|+.+.+..+..
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~- 277 (394)
T 4gt6_A 211 TSDSESYPA-IDNVLYEKSANGDYAL----------IRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV- 277 (394)
T ss_dssp EECCSSSCB-SSSCEEEECTTSCEEE----------EECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-
T ss_pred ccccccccc-ccceeecccccccccc----------cccccccccceEEcC-CcceEcccceeeecccccEEecccccc-
Confidence 665554431 1111111000000000 000011112222221 112222233444444455554443322
Q ss_pred ccCChhhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCccccccccc
Q 043136 332 GEIPQDIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLV 411 (902)
Q Consensus 332 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~ 411 (902)
......|..+..|+.+.+. +.++......|..+.+|+.+++..+ ++..-...|.++.+|+.+.+..+ ++..-...|.
T Consensus 278 ~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 278 SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 1223334444555555543 3333344455555556666665543 44334455555666666666433 4444456788
Q ss_pred ccCCCcEEEccCCccCCCCCcccCCCCCCcEEEccCcccC
Q 043136 412 NCSSLSRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLS 451 (902)
Q Consensus 412 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 451 (902)
+|++|+.+++.+|.... ..|....+|+.+.+..|.+.
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 88888888888876531 45667778888887766553
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=1.4e-11 Score=135.73 Aligned_cols=103 Identities=25% Similarity=0.166 Sum_probs=60.3
Q ss_pred EEEccCC-CccCCCCccccCCCCCcEEEeeC-cccCCCCChhccCCCCCCEEEccCccCcccCCccccCCCCccEEecCC
Q 043136 202 FLDLAGN-SLTGSLPPQLGLLTQLERIEIGY-NNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLTKLEMLLLFK 279 (902)
Q Consensus 202 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 279 (902)
.++++++ +|+ .+|. +..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 666 3555 66666666666664 666655556666666666666666666665555566666666666666
Q ss_pred CccceecCCCCCCcCcCcEEecccCCCc
Q 043136 280 NHFTGEIPVSYGNLQALQVLDLSDNQLS 307 (902)
Q Consensus 280 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 307 (902)
|+|++..+..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666544444444333 555555555544
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=3.9e-10 Score=126.36 Aligned_cols=335 Identities=10% Similarity=0.056 Sum_probs=152.7
Q ss_pred cccCchhhhccC-CCcEEEccCCCCCCCCCcccccccccceecccccc---ccCCCchhhhcccCCcEEeccCccCcCCC
Q 043136 115 DGPLQPAILELT-KLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNS---FTGPLPLEFVQLNSLQQLNLGGSYFDGEI 190 (902)
Q Consensus 115 ~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 190 (902)
+.+...+|.++. .|+.+.+-.+ ++..-...|.++++|+.+.+..|. ++..-..+|
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF-------------------- 110 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAF-------------------- 110 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTT--------------------
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhc--------------------
Confidence 334455666663 4777777543 444444445555555555554442 332233344
Q ss_pred CcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccCcccCCccccCCC
Q 043136 191 PSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNLSGTLPSEISNLT 270 (902)
Q Consensus 191 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 270 (902)
.++.+|+.+.+..+ ++..-...|..+.+|+.+.+..+ +..+....|..+.+|+.+.+..+ ++..-..+|. ..
T Consensus 111 ----~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~ 182 (394)
T 4gt6_A 111 ----MFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GT 182 (394)
T ss_dssp ----TTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TC
T ss_pred ----hhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-cc
Confidence 44444444444332 22223334444555555555422 22233344555555555555433 2222223333 24
Q ss_pred CccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCChhhhhccccceEEec
Q 043136 271 KLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQDIELLADLDTLLLW 350 (902)
Q Consensus 271 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 350 (902)
+|+.+.+..+-.. .....|.++.+++......+......-..+........-... +.....+..+.+.
T Consensus 183 ~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ip 250 (394)
T 4gt6_A 183 ALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR-----------YPSQREDPAFKIP 250 (394)
T ss_dssp CCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE-----------CCTTCCCSEEECC
T ss_pred ceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccc-----------cccccccceEEcC
Confidence 4555555443222 333445555555555554443321111111110000000000 0000111122211
Q ss_pred CceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCCcEEEccCCccCCCC
Q 043136 351 NNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSLSRLRIQDNQLNGSI 430 (902)
Q Consensus 351 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 430 (902)
+.++......|..+..|+.+.+..+..+ .....|.++..|+.+.+. +.++..-...|.+|.+|+.++|.++ ++..-
T Consensus 251 -~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 251 -NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp -TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred -CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 1222233445555555665555543322 333445555666666654 3344344455677777777777654 54344
Q ss_pred CcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceecccccccCCCcChhhhcccccceeccCCCcc
Q 043136 431 PQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNISENSFQTSLPSNIWSAPNLKILSASSSKL 498 (902)
Q Consensus 431 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 498 (902)
..+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+++.+|... -..+....+|+.+.+..|.+
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 556777777777777543 55444567777777777777776542 13455666677776655543
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.07 E-value=1.2e-10 Score=122.75 Aligned_cols=142 Identities=20% Similarity=0.075 Sum_probs=106.4
Q ss_pred ccCCcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEEEEEc
Q 043136 712 SMSDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 712 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
|.....++.|+.+.||+++.. ++.+++|+....... ....+.+|+++++.+. +..++++++++...+..|+||||
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 334566777888999999754 688999998542211 1224678999988874 67888999999888899999999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC-------------------------------------
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD------------------------------------- 833 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~------------------------------------- 833 (902)
++|.++.+..... .....++.++++++..||+.
T Consensus 92 i~G~~l~~~~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 92 ADGVLCSEEYEDE----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp CSSEEHHHHCCTT----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred cCCeehhhccCCc----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999987753110 11236788999999999971
Q ss_pred -------------------CCCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 834 -------------------CDPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 834 -------------------~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
....++|+|++|.||+++++..+.|+||+.+...
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 0144899999999999987666789999987643
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.05 E-value=4.1e-11 Score=131.61 Aligned_cols=205 Identities=18% Similarity=0.205 Sum_probs=112.3
Q ss_pred CCCEEEEEcCCCCccc-c-------cCccccCCCCCCEEEccCCCCc---------ccCchhhhccCCCcEEEccCCCCC
Q 043136 77 SSQITSLDLSRRSLSG-P-------IPPEIRYLTSLTHLNLSANAFD---------GPLQPAILELTKLRTIDISHNSFN 139 (902)
Q Consensus 77 ~~~v~~L~L~~~~l~g-~-------~~~~~~~l~~L~~L~Ls~n~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~ 139 (902)
..+|+.|.+...+..| . +.+++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3478888887766553 2 2345667889999998765431 235566678889999999887311
Q ss_pred CCCCcccccccccceeccccccccCCCchhhh--cccCCcEEeccC--ccCcCCCCcccCCCCCCCEEEccCCCccCCCC
Q 043136 140 STFPPGISKLRFLRIFNAYSNSFTGPLPLEFV--QLNSLQQLNLGG--SYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLP 215 (902)
Q Consensus 140 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 215 (902)
.++. + .+++|+.|+|..+.++......++ .+++|++|+|+. |...+... +.. +.
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~--~~~-----------------l~ 243 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD--MNV-----------------FR 243 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC--GGG-----------------TG
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh--HHH-----------------HH
Confidence 2333 3 267788888877776544333444 567777777752 22111100 000 00
Q ss_pred ccc--cCCCCCcEEEeeCcccCCCCChhcc---CCCCCCEEEccCccCccc----CCccccCCCCccEEecCCCccceec
Q 043136 216 PQL--GLLTQLERIEIGYNNLQGEVPVEFA---SLVNLKYMDISACNLSGT----LPSEISNLTKLEMLLLFKNHFTGEI 286 (902)
Q Consensus 216 ~~~--~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~ 286 (902)
..+ ..+++|++|+|++|.++...+..+. .+++|++|+|+.|.+++. ++..+.++++|+.|+|++|.|+...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 011 1245555555555555433222222 355677777777766643 2333345667777777777665432
Q ss_pred CCCCCC-cCcCcEEecccCC
Q 043136 287 PVSYGN-LQALQVLDLSDNQ 305 (902)
Q Consensus 287 p~~~~~-l~~L~~L~Ls~N~ 305 (902)
-..+.. + ...+++++++
T Consensus 324 ~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 324 KKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHc--CCEEEecCCc
Confidence 222221 1 2456777766
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=1.4e-10 Score=127.44 Aligned_cols=213 Identities=14% Similarity=0.171 Sum_probs=103.5
Q ss_pred CCCCEEEccCCCCcc-cC-------chhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcc
Q 043136 102 TSLTHLNLSANAFDG-PL-------QPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQL 173 (902)
Q Consensus 102 ~~L~~L~Ls~n~l~~-~~-------~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 173 (902)
..++.|.+....+.| .. ..++..+++|+.|.+..+..... +++... .+.+...+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCB-CCBCHHHHHTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------cccccc-ccCHHHHHhcC
Confidence 356777777655542 11 23345667777777765432110 000000 12344556667
Q ss_pred cCCcEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCcccc--CCCCCcEEEeeC--cccCCCCChhccCCCCCC
Q 043136 174 NSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLG--LLTQLERIEIGY--NNLQGEVPVEFASLVNLK 249 (902)
Q Consensus 174 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~ 249 (902)
++|+.|+|++|.-. .++. +. +++|++|+|..|.++......+. .+++|++|+|+. |...+...
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~---------- 238 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD---------- 238 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC----------
T ss_pred CCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh----------
Confidence 77777777766211 1222 22 56677777766665432222222 456666666642 22111100
Q ss_pred EEEccCccCcccCCccc--cCCCCccEEecCCCccceecCCCC---CCcCcCcEEecccCCCccc----cCccccccCCC
Q 043136 250 YMDISACNLSGTLPSEI--SNLTKLEMLLLFKNHFTGEIPVSY---GNLQALQVLDLSDNQLSGP----IPASLASLKGL 320 (902)
Q Consensus 250 ~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L 320 (902)
+. .+...+ ..+++|++|+|++|.+.+..+..+ ..+++|++|+|+.|.+++. ++..+..+++|
T Consensus 239 --------~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L 309 (362)
T 2ra8_A 239 --------MN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHL 309 (362)
T ss_dssp --------GG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTC
T ss_pred --------HH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcc
Confidence 00 000011 124555555555555543221111 2356677777777776643 33344556777
Q ss_pred CEEEccCccccccCChhhhh-ccccceEEecCce
Q 043136 321 TRLSLMNNVLFGEIPQDIEL-LADLDTLLLWNNH 353 (902)
Q Consensus 321 ~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 353 (902)
+.|+|++|.++...-..+.. + ...+++++++
T Consensus 310 ~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 310 KFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred eEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 77777777765433233322 1 2556777766
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.97 E-value=1.8e-11 Score=127.58 Aligned_cols=22 Identities=9% Similarity=-0.106 Sum_probs=16.8
Q ss_pred CCccccEEecCCCCCEEEEEcC
Q 043136 65 WCSWSGIKCNPKSSQITSLDLS 86 (902)
Q Consensus 65 ~C~w~Gv~c~~~~~~v~~L~L~ 86 (902)
.|+|.|+.|+....+|+.+...
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~ 98 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINS 98 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEE
T ss_pred HHhcCcEEECCCCCEEEEEEec
Confidence 5899999999877677665443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=4.2e-08 Score=109.11 Aligned_cols=316 Identities=11% Similarity=0.056 Sum_probs=139.1
Q ss_pred cccCCCCCCEEEccCCCCcccCchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCchhhhcccCC
Q 043136 97 EIRYLTSLTHLNLSANAFDGPLQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPLEFVQLNSL 176 (902)
Q Consensus 97 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 176 (902)
++....+|+.+.+.. .++.+...+|.++++|+.++|..+ ++..-...|.+. .|+.+.+..+ ++.....+|... +|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 344455666666642 345445556666666666666533 443333445444 3444444322 222223334332 56
Q ss_pred cEEeccCccCcCCCCcccCCCCCCCEEEccCCCccCCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 177 QQLNLGGSYFDGEIPSDYRNLSSLRFLDLAGNSLTGSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 177 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+.+.+..+... .-...|.+. +|+.+.+..+ ++..-...|....+++.+.+..+.........+. . +
T Consensus 116 ~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-~----------~ 181 (379)
T 4h09_A 116 DDFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL-Y----------N 181 (379)
T ss_dssp SEEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE-E----------E
T ss_pred ccccCCCcccc-ccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeeccccee-c----------c
Confidence 66655543211 222233332 3444444332 2223334455555555555543332110000000 0 0
Q ss_pred cCcccCCccccCCCCccEEecCCCccceecCCCCCCcCcCcEEecccCCCccccCccccccCCCCEEEccCccccccCCh
Q 043136 257 NLSGTLPSEISNLTKLEMLLLFKNHFTGEIPVSYGNLQALQVLDLSDNQLSGPIPASLASLKGLTRLSLMNNVLFGEIPQ 336 (902)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (902)
. .......+.....+..+.+..+.- ......+.....|+.+.+..+ +.......|.++..|+.+.+..+ ++.....
T Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 K-NKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp T-TSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred c-ccceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 0 000111222233333333322211 122333444444444444333 22233344444555555555443 3323333
Q ss_pred hhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCC
Q 043136 337 DIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSL 416 (902)
Q Consensus 337 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L 416 (902)
.|..+.+|+.+.+..+ ++......|..+.+|+.+++.++.++..-...|.++.+|+.+.+..+ ++..-...|.+|++|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 4444555555555332 33344445555555555555555555444455555566666665433 443344567777777
Q ss_pred cEEEccCCccCCCCCcccCCCC
Q 043136 417 SRLRIQDNQLNGSIPQGFGLLP 438 (902)
Q Consensus 417 ~~L~Ls~N~l~~~~p~~~~~l~ 438 (902)
+.+.+..+ ++..-..+|.+.+
T Consensus 336 ~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 336 STISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCCCCCTT-CCEECTTTTTTSS
T ss_pred CEEEECCc-cCEEchhHhhCCC
Confidence 77777654 5433345565543
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=7.4e-08 Score=107.16 Aligned_cols=130 Identities=12% Similarity=0.103 Sum_probs=61.6
Q ss_pred hhhhccccceEEecCceeccccCccccCCCceeEEEecCCcccCCCCCCccCCCCccEEeccCCcCcccccccccccCCC
Q 043136 337 DIELLADLDTLLLWNNHLTGVLPQKLGSNGKLLTVDVSSNSLTGPIPPTICDGDRLFKLILFSNNFTYSIPENLVNCSSL 416 (902)
Q Consensus 337 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~p~~l~~l~~L 416 (902)
.+.....|+.+.+..+ ++......|..+..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444445555555433 33333444555555555555443 33333334444444544444322 322223345555555
Q ss_pred cEEEccCCccCCCCCcccCCCCCCcEEEccCcccCCCCCCcCcccCcCceeccc
Q 043136 417 SRLRIQDNQLNGSIPQGFGLLPNLTFMDMSRNSLSGEIPRDLGNAQKLEYLNIS 470 (902)
Q Consensus 417 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 470 (902)
+.+.+.++.++..-..+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+.+.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 55555555555333445555555555555432 433333455555555555554
No 412
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.91 E-value=8.3e-10 Score=115.96 Aligned_cols=132 Identities=17% Similarity=0.127 Sum_probs=95.6
Q ss_pred Eee-ecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcCe--eEeEEeEEecCCeeEEEEEccCC
Q 043136 717 ILG-MGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHRN--IVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 717 ~iG-~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
.++ .|..+.||++...+|+.+++|...... ...+.+|+++++.+.+.. +++++++....+..++||||++|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G 99 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 99 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence 344 455699999987778889999874331 133567888888874333 66788888888889999999999
Q ss_pred CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 043136 794 GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC--------------------------------------- 834 (902)
Q Consensus 794 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--------------------------------------- 834 (902)
.++. ... .+ ...++.++++.+..+|+..
T Consensus 100 ~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 100 QDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp EETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 8774 110 11 1245677777788887532
Q ss_pred ----------------CCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 835 ----------------DPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 835 ----------------~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
...++|+|++|.||++++++.++|+|||.+...
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999987766789999998653
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.88 E-value=2.7e-09 Score=117.97 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=102.4
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEec--ccchhhHHHHHHHHHHHHHHhcCC--cCeeEeEEeEEecC---CeeEEEE
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLW--GKHKENIRRRRGVLAEVDVLGNVR--HRNIVRLLGCCSNR---ECTMLLY 788 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~--~~~~~~~~~~~~~~~Ei~il~~l~--h~nIv~l~~~~~~~---~~~~lv~ 788 (902)
+.++.|.++.||+++..+ ..+++|+.. ... .......+.+|+++++.+. +..+++++.++.+. +..|+||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~--~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSK--LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCC--CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 568999999999998754 678888764 221 1122345778999998886 45688999988776 4589999
Q ss_pred EccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 043136 789 EYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC---------------------------------- 834 (902)
Q Consensus 789 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---------------------------------- 834 (902)
||++|..+.+.. ...++...+..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 121 EFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp ECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999987764311 012445666788999999999999731
Q ss_pred ---------------------CCCeEEcCCCCCCEEEcCCCC--EEEeeccccee
Q 043136 835 ---------------------DPVIVHRDLKPSNILLDGEME--ARVADFGVAKL 866 (902)
Q Consensus 835 ---------------------~~~ivHrDlKp~NILl~~~~~--~kl~DFGla~~ 866 (902)
...++|+|++|.||+++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 69999998875
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.56 E-value=6.1e-09 Score=103.18 Aligned_cols=123 Identities=17% Similarity=0.176 Sum_probs=65.2
Q ss_pred ccCccccCCCCCCEEEccCC-CCccc----CchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCc
Q 043136 93 PIPPEIRYLTSLTHLNLSAN-AFDGP----LQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLP 167 (902)
Q Consensus 93 ~~~~~~~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 167 (902)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|....... +.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~ 86 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LA 86 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HH
Confidence 44556677778888888887 77643 2334455677777777777775321111 11
Q ss_pred hhhhcccCCcEEeccCccCcCC----CCcccCCCCCCCEEEc--cCCCccCC----CCccccCCCCCcEEEeeCcccC
Q 043136 168 LEFVQLNSLQQLNLGGSYFDGE----IPSDYRNLSSLRFLDL--AGNSLTGS----LPPQLGLLTQLERIEIGYNNLQ 235 (902)
Q Consensus 168 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 235 (902)
..+...++|++|+|++|.|... +...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 87 ~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 87 EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2223334444444444444321 2233444455566666 55555522 2233444456666666666654
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=1.4e-08 Score=105.59 Aligned_cols=65 Identities=20% Similarity=0.285 Sum_probs=26.8
Q ss_pred CCCCCEEEccCCCccC--CCCccccCCCCCcEEEeeCcccCCCCChhccCCC--CCCEEEccCccCcccCC
Q 043136 197 LSSLRFLDLAGNSLTG--SLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLV--NLKYMDISACNLSGTLP 263 (902)
Q Consensus 197 l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 263 (902)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 2223333444444444444444432 1122222 45555555555554333
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.41 E-value=9.9e-07 Score=95.48 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=91.9
Q ss_pred CcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc----CeeEeEEeEEecCCeeEEEEEc
Q 043136 715 DKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH----RNIVRLLGCCSNRECTMLLYEY 790 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h----~nIv~l~~~~~~~~~~~lv~e~ 790 (902)
.+.++.|....||++ ++.+++|+.... .....+.+|.+++..+.+ ..|++++++ +..|+||||
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 367899999999998 566888876221 123347789988877755 234566655 567899999
Q ss_pred cCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 043136 791 MPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC------------------------------------ 834 (902)
Q Consensus 791 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~------------------------------------ 834 (902)
++|.++.+.... .++......++.++++.++.||+..
T Consensus 109 i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 109 IKGERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCBCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999888633211 1233344456666666666666432
Q ss_pred ------------------------CCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 835 ------------------------DPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 835 ------------------------~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
...++|+|++|.||+++.+..+.|+||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123699999999999998766799999998654
No 417
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.41 E-value=6.1e-07 Score=96.40 Aligned_cols=136 Identities=21% Similarity=0.243 Sum_probs=94.1
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcC-CcC--eeEeEEeEEecCC---eeEEEEE
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNV-RHR--NIVRLLGCCSNRE---CTMLLYE 789 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l-~h~--nIv~l~~~~~~~~---~~~lv~e 789 (902)
+.++.|....||++. +.+++|+.... .....+.+|+++++.+ .+. -+++.+......+ ..|+|||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 568999999999874 45888875321 2345678899998877 332 2455665544333 4589999
Q ss_pred ccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 043136 790 YMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD------------------------------------ 833 (902)
Q Consensus 790 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~------------------------------------ 833 (902)
+++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 97 ~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 9999887653221 133445556677777777777751
Q ss_pred -------------------CCCCeEEcCCCCCCEEEcC--CCCEEEeecccceec
Q 043136 834 -------------------CDPVIVHRDLKPSNILLDG--EMEARVADFGVAKLI 867 (902)
Q Consensus 834 -------------------~~~~ivHrDlKp~NILl~~--~~~~kl~DFGla~~~ 867 (902)
....++|+|++|.||++++ ...+.|+||+.+...
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1235899999999999998 456899999988753
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=1.1e-07 Score=94.04 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=19.1
Q ss_pred ccCCCCCcEEEeeCc-ccCCC----CChhccCCCCCCEEEccCccCc
Q 043136 218 LGLLTQLERIEIGYN-NLQGE----VPVEFASLVNLKYMDISACNLS 259 (902)
Q Consensus 218 ~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 259 (902)
+...++|++|+|++| .|... +...+...++|++|+|++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 344455555555555 44421 1222333444555555555543
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=5.6e-06 Score=88.82 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=88.7
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcC---eeEeEEeEEe-cCCeeEEEEEcc
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHR---NIVRLLGCCS-NRECTMLLYEYM 791 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~---nIv~l~~~~~-~~~~~~lv~e~~ 791 (902)
+.++.|....||+. ++.+++|+-.. ......+.+|+++++.+.+. .|++.+.++. ..+..|+|||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 56888999999998 46688887421 12345678899999988642 4667777774 456678999999
Q ss_pred CCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 043136 792 PNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHD-------------------------------------- 833 (902)
Q Consensus 792 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-------------------------------------- 833 (902)
+|..+.+..... .+......++.++++.++.||+.
T Consensus 96 ~G~~l~~~~~~~-------l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGMAV-------LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHHTT-------SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhhhh-------CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 998776531100 11122222333333333333321
Q ss_pred -------------------CCCCeEEcCCCCCCEEEcC---CCC-EEEeecccceec
Q 043136 834 -------------------CDPVIVHRDLKPSNILLDG---EME-ARVADFGVAKLI 867 (902)
Q Consensus 834 -------------------~~~~ivHrDlKp~NILl~~---~~~-~kl~DFGla~~~ 867 (902)
....++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2345799999999999987 455 489999988653
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.22 E-value=6.2e-06 Score=86.76 Aligned_cols=136 Identities=18% Similarity=0.161 Sum_probs=96.2
Q ss_pred EeeecCce-EEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEEEEEccCC
Q 043136 717 ILGMGSTG-TVYKAEMP-GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 717 ~iG~G~~g-~Vy~~~~~-~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
.+..|..| .||+.... ++..+++|+-... ....+.+|.++++.+. +--|.++++++.+.+..|+|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 45556555 69998664 4567888875321 2345677888887773 44477889999989999999999999
Q ss_pred CCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 043136 794 GNLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDC--------------------------------------- 834 (902)
Q Consensus 794 gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--------------------------------------- 834 (902)
.++.+...... .....+..++++.+..||...
T Consensus 105 ~~~~~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 105 KTAFQVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp EEHHHHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred ccccccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 88877653211 112245666777777777421
Q ss_pred ----------------CCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 835 ----------------DPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 835 ----------------~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
...++|+|+.+.||++++++.+-|+||+.+...
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 113799999999999998877789999988653
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.17 E-value=5.8e-06 Score=87.67 Aligned_cols=75 Identities=17% Similarity=0.092 Sum_probs=57.7
Q ss_pred CcEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcC---eeEeEEeEEecCCeeEEEEEcc
Q 043136 715 DKILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHR---NIVRLLGCCSNRECTMLLYEYM 791 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~---nIv~l~~~~~~~~~~~lv~e~~ 791 (902)
.+.|+.|.++.||+++..+|+.+++|+....... ....+.+|++.++.+.+. .|++++++. ..++||||+
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~---~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc---hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 3679999999999999888999999986432111 123467899999998754 578888764 368999999
Q ss_pred CCCCH
Q 043136 792 PNGNL 796 (902)
Q Consensus 792 ~~gsL 796 (902)
+|+.+
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 98864
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.06 E-value=1.4e-05 Score=87.71 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=53.4
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCcC--eeEeEEeEEecC-CeeEEEEEccC
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRHR--NIVRLLGCCSNR-ECTMLLYEYMP 792 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h~--nIv~l~~~~~~~-~~~~lv~e~~~ 792 (902)
+.++.|....||+++. +++.+++|..... ..+.+|+.++..+... .+++++.++... +..|+||||++
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 5689999999999976 5788999987322 1366788888777532 356777777654 67899999998
Q ss_pred CCCH
Q 043136 793 NGNL 796 (902)
Q Consensus 793 ~gsL 796 (902)
|..+
T Consensus 118 G~~l 121 (362)
T 3ovc_A 118 GVTL 121 (362)
T ss_dssp SEET
T ss_pred CCCc
Confidence 7654
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.91 E-value=7.5e-06 Score=89.98 Aligned_cols=82 Identities=7% Similarity=-0.021 Sum_probs=53.1
Q ss_pred cEe-eecCceEEEEEEeC-------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-c--CeeEeEEeEEecC---
Q 043136 716 KIL-GMGSTGTVYKAEMP-------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-H--RNIVRLLGCCSNR--- 781 (902)
Q Consensus 716 ~~i-G~G~~g~Vy~~~~~-------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h--~nIv~l~~~~~~~--- 781 (902)
+.| +.|....+|+++.. +++.+++|+..............+.+|+++++.+. + ..|++++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78889999998764 26678888764322000000123566888877773 3 3577888887655
Q ss_pred CeeEEEEEccCCCCHH
Q 043136 782 ECTMLLYEYMPNGNLD 797 (902)
Q Consensus 782 ~~~~lv~e~~~~gsL~ 797 (902)
+..|+||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3578999999886543
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.73 E-value=5e-05 Score=84.64 Aligned_cols=77 Identities=13% Similarity=0.035 Sum_probs=47.8
Q ss_pred cEeeecCceEEEEEEeC-CCcEEEEEEecccch-hhH---HHHHHHHHHHHHHhcCC---cCeeEeEEeEEecCCeeEEE
Q 043136 716 KILGMGSTGTVYKAEMP-GGEIIAVKKLWGKHK-ENI---RRRRGVLAEVDVLGNVR---HRNIVRLLGCCSNRECTMLL 787 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~-~~~~vavK~i~~~~~-~~~---~~~~~~~~Ei~il~~l~---h~nIv~l~~~~~~~~~~~lv 787 (902)
+.+|.|..+.||+++.. +++.+++|....... ... ...+++..|.++++.+. ...+++++.+. .+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEEE
Confidence 57899999999999654 467899998643221 000 01234566888887663 23455666543 4456899
Q ss_pred EEccCCC
Q 043136 788 YEYMPNG 794 (902)
Q Consensus 788 ~e~~~~g 794 (902)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.00013 Score=79.31 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.3
Q ss_pred CCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 835 DPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 835 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
...++|+|+++.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 45699999999999998888999999998754
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00019 Score=76.67 Aligned_cols=139 Identities=19% Similarity=0.195 Sum_probs=90.3
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC---cCeeEeEEeEEecCCeeEEEEEccC
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR---HRNIVRLLGCCSNRECTMLLYEYMP 792 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~ 792 (902)
+.|+.|....+|+++. +++.+++|+.... ....+.+|++.++.+. ...|++++.++...+..|+||||++
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 5689999999999986 5677888876322 1345678888888773 3678899999888889999999999
Q ss_pred CCCHH--------HH---HHhhcc-C----------------CCcccCHHHHH---HHHHH----------------HHH
Q 043136 793 NGNLD--------DL---LHAKNK-G----------------ENLVADWVTRY---KIALG----------------VAQ 825 (902)
Q Consensus 793 ~gsL~--------~~---l~~~~~-~----------------~~~~~~~~~~~---~i~~q----------------i~~ 825 (902)
|..+. +. ++.... . ....-+|...+ ++..+ +++
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87541 11 222111 0 01122454321 11111 111
Q ss_pred H-HHHHHh-CCCCCeEEcCCCCCCEEEcCCCCEEEeecc
Q 043136 826 G-ICYLHH-DCDPVIVHRDLKPSNILLDGEMEARVADFG 862 (902)
Q Consensus 826 ~-L~~LH~-~~~~~ivHrDlKp~NILl~~~~~~kl~DFG 862 (902)
. ...+.. ...+.+||+|+.+.|++++.++ +.|+||.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 123321 2245699999999999999887 9999984
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.52 E-value=0.00027 Score=79.35 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=27.9
Q ss_pred CCCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 835 DPVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 835 ~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
...++|+|++|.||+++.++ ++++||+.+..-
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 45699999999999998876 999999988753
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.47 E-value=2.9e-05 Score=74.75 Aligned_cols=34 Identities=6% Similarity=0.045 Sum_probs=15.2
Q ss_pred CCCEEEccCCCCcccCchhhhccCCCcEEEccCC
Q 043136 103 SLTHLNLSANAFDGPLQPAILELTKLRTIDISHN 136 (902)
Q Consensus 103 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 136 (902)
.|++|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3444444444444333333444444444444444
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.38 E-value=5.8e-05 Score=72.70 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=16.5
Q ss_pred CCcEEEeeCcccCCCCChhccCCCCCCEEEccCc
Q 043136 223 QLERIEIGYNNLQGEVPVEFASLVNLKYMDISAC 256 (902)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 256 (902)
+|++||++++.|+..--..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555444333333444555555555555
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.18 E-value=4.1e-05 Score=75.15 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=61.8
Q ss_pred cCccccCCCCCCEEEccCC-CCccc----CchhhhccCCCcEEEccCCCCCCCCCcccccccccceeccccccccCCCch
Q 043136 94 IPPEIRYLTSLTHLNLSAN-AFDGP----LQPAILELTKLRTIDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPL 168 (902)
Q Consensus 94 ~~~~~~~l~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 168 (902)
+...+.+-+.|++|+|++| +|... +-.++..-+.|+.|+|++|.|....-.. +-.
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~a--------------------lA~ 92 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARG--------------------LIE 92 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTT--------------------HHH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHH--------------------HHH
Confidence 3334455567777777774 66532 2344555667777777777765322111 122
Q ss_pred hhhcccCCcEEeccCccCcCC----CCcccCCCCCCCEEEccCCC---ccC----CCCccccCCCCCcEEEeeCcccC
Q 043136 169 EFVQLNSLQQLNLGGSYFDGE----IPSDYRNLSSLRFLDLAGNS---LTG----SLPPQLGLLTQLERIEIGYNNLQ 235 (902)
Q Consensus 169 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~---l~~----~~p~~~~~l~~L~~L~L~~N~l~ 235 (902)
.+..-+.|++|+|+.|.|... +-..+..-+.|++|+|++|. +.. .+...+..-+.|++|+++.|.+.
T Consensus 93 aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 93 LIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 333334455555555555421 11223333456666666442 221 12233445566777777666543
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.15 E-value=0.0023 Score=67.59 Aligned_cols=73 Identities=18% Similarity=0.114 Sum_probs=51.3
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-c--CeeEeEEeEEecCCeeEEEEEccC
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-H--RNIVRLLGCCSNRECTMLLYEYMP 792 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h--~nIv~l~~~~~~~~~~~lv~e~~~ 792 (902)
+.+|.|..+.||+++..+|+.|++|+....... ....+.+|++.|+.+. . --+++++++. ..++||||++
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~ 93 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence 568999999999999999999999986433221 1234667888887763 2 2355666543 2478999998
Q ss_pred CCC
Q 043136 793 NGN 795 (902)
Q Consensus 793 ~gs 795 (902)
++.
T Consensus 94 ~~~ 96 (288)
T 3f7w_A 94 ERP 96 (288)
T ss_dssp CCC
T ss_pred ccC
Confidence 764
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.02 E-value=0.0015 Score=70.68 Aligned_cols=33 Identities=45% Similarity=0.514 Sum_probs=28.0
Q ss_pred CCCeEEcCCCCCCEEEcCC----CCEEEeecccceec
Q 043136 835 DPVIVHRDLKPSNILLDGE----MEARVADFGVAKLI 867 (902)
Q Consensus 835 ~~~ivHrDlKp~NILl~~~----~~~kl~DFGla~~~ 867 (902)
...++|+|+.+.||+++.+ +.+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4569999999999999875 67999999988653
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.89 E-value=0.00034 Score=68.67 Aligned_cols=15 Identities=7% Similarity=0.206 Sum_probs=6.7
Q ss_pred CCCCCEEEccCccCc
Q 043136 245 LVNLKYMDISACNLS 259 (902)
Q Consensus 245 l~~L~~L~Ls~N~l~ 259 (902)
-+.|+.|+|++|+|.
T Consensus 69 N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 69 SKHIEKFSLANTAIS 83 (197)
T ss_dssp CSCCCEEECTTSCCB
T ss_pred CCCcCEEEccCCCCC
Confidence 344444444444443
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.84 E-value=0.0042 Score=66.61 Aligned_cols=145 Identities=14% Similarity=0.166 Sum_probs=77.0
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-c-CeeEeEEeE------EecCCeeEEE
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-H-RNIVRLLGC------CSNRECTMLL 787 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h-~nIv~l~~~------~~~~~~~~lv 787 (902)
+.|+.|....+|+++..++ .+++|...... ..+.+..|++++..+. + -.+++++.. ....+..+++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 4566788899999987555 57889875421 1123445666665552 1 113333321 1224567899
Q ss_pred EEccCCCCHH-----H---------HHHhhccC-C-C-----cccCHHHHHH------------HHHHHHHHHHHHHhC-
Q 043136 788 YEYMPNGNLD-----D---------LLHAKNKG-E-N-----LVADWVTRYK------------IALGVAQGICYLHHD- 833 (902)
Q Consensus 788 ~e~~~~gsL~-----~---------~l~~~~~~-~-~-----~~~~~~~~~~------------i~~qi~~~L~~LH~~- 833 (902)
|+|++|..+. . .++..... . . ....|...+. +...+.+.+++++..
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 9999875431 1 11211100 0 0 0011222100 011234445555532
Q ss_pred ---CCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 834 ---CDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 834 ---~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
....++|+|+.+.||++++++.+.|+||+.+..
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 134599999999999999876668999988754
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.76 E-value=0.0034 Score=67.56 Aligned_cols=144 Identities=12% Similarity=0.117 Sum_probs=78.1
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCCc--CeeEeEEeE-----EecCCeeEEEE
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVRH--RNIVRLLGC-----CSNRECTMLLY 788 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~h--~nIv~l~~~-----~~~~~~~~lv~ 788 (902)
+.++ |....||++...+|+.+++|....... ..+.+..|.+++..+.. -.+++++.. ....+..++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 3466 888899999776777899998853211 12234456666665531 124444432 12245668899
Q ss_pred EccCCCCHH-----HH---------HHhhccC----CCcccCHHHH----HH---------------HHHHHHHHHHHHH
Q 043136 789 EYMPNGNLD-----DL---------LHAKNKG----ENLVADWVTR----YK---------------IALGVAQGICYLH 831 (902)
Q Consensus 789 e~~~~gsL~-----~~---------l~~~~~~----~~~~~~~~~~----~~---------------i~~qi~~~L~~LH 831 (902)
|+++|..+. .. ++..... .....++... .. +...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999874321 11 1111110 0111121110 00 0111112233332
Q ss_pred hC----CCCCeEEcCCCCCCEEEcCCCCEEEeeccccee
Q 043136 832 HD----CDPVIVHRDLKPSNILLDGEMEARVADFGVAKL 866 (902)
Q Consensus 832 ~~----~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~~ 866 (902)
.. ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 21 234589999999999999 4 899999987754
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.61 E-value=0.0018 Score=68.92 Aligned_cols=70 Identities=11% Similarity=0.005 Sum_probs=41.4
Q ss_pred cEeeecCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEEEEEcc-CC
Q 043136 716 KILGMGSTGTVYKAEMPGGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTMLLYEYM-PN 793 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~-~~ 793 (902)
+.|+.|....+|++ +.+++|+....... .....+|+++++.+. +.-.++++++. .+.-++|+||+ +|
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA 92 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence 67889999999999 45888876432111 111234666666553 21124555543 33457899999 66
Q ss_pred CCH
Q 043136 794 GNL 796 (902)
Q Consensus 794 gsL 796 (902)
.++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.60 E-value=0.0018 Score=59.23 Aligned_cols=55 Identities=24% Similarity=0.274 Sum_probs=29.6
Q ss_pred EEeccCcccc-ccCCccccccccceEEEeeCCcceecCCCCCCCCCcccEEEccCCcc
Q 043136 513 KIELHNNLLN-GSIPWDIGHCEKLLLLNLSRNSLTGIIPWEISGLPSITDVDLSHNFL 569 (902)
Q Consensus 513 ~l~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 569 (902)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5566666664 24554332 2455555555555555555555555555555555554
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.57 E-value=0.0032 Score=69.03 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=79.5
Q ss_pred cEeeecCceEEEEEEeC--------CCcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEE
Q 043136 716 KILGMGSTGTVYKAEMP--------GGEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~--------~~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~l 786 (902)
+.+..|-...+|++... +++.+++|+.-... .......+|.++++.+. +.-.+++++++.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 46777888899999864 24788888862211 11234557888887773 3334677776653 29
Q ss_pred EEEccCCCCHHH--------------HH---HhhccCCCcccC--HHHHHHHHHHHH-------------------HHHH
Q 043136 787 LYEYMPNGNLDD--------------LL---HAKNKGENLVAD--WVTRYKIALGVA-------------------QGIC 828 (902)
Q Consensus 787 v~e~~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~qi~-------------------~~L~ 828 (902)
||||++|..+.. .+ +.....-..... +.+..++..++. +.++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999998754421 11 111000001111 233333333321 1223
Q ss_pred HH----HhC-CCCCeEEcCCCCCCEEEcCC----CCEEEeeccccee
Q 043136 829 YL----HHD-CDPVIVHRDLKPSNILLDGE----MEARVADFGVAKL 866 (902)
Q Consensus 829 ~L----H~~-~~~~ivHrDlKp~NILl~~~----~~~kl~DFGla~~ 866 (902)
++ ... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 33 221 23458999999999999876 7899999998864
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.50 E-value=0.0041 Score=69.69 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=46.5
Q ss_pred cEeeecCceEEEEEEeCC--------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEE
Q 043136 716 KILGMGSTGTVYKAEMPG--------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~l 786 (902)
+.|+.|....||++...+ ++.+++|+...... .+.+.+|..+++.+. +.-.+++++.+.+ .+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-----ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 567888899999998653 47888998733111 123446888887763 3334667776542 28
Q ss_pred EEEccCCCC
Q 043136 787 LYEYMPNGN 795 (902)
Q Consensus 787 v~e~~~~gs 795 (902)
||||++|.+
T Consensus 150 v~e~l~G~~ 158 (429)
T 1nw1_A 150 LEEYIPSRP 158 (429)
T ss_dssp EECCCCEEE
T ss_pred EEEEeCCcc
Confidence 999997633
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.0041 Score=56.86 Aligned_cols=55 Identities=24% Similarity=0.288 Sum_probs=28.5
Q ss_pred EEEccCCCcc-CCCCccccCCCCCcEEEeeCcccCCCCChhccCCCCCCEEEccCccC
Q 043136 202 FLDLAGNSLT-GSLPPQLGLLTQLERIEIGYNNLQGEVPVEFASLVNLKYMDISACNL 258 (902)
Q Consensus 202 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 258 (902)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23443322 2455555555555544445555555566666665554
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.21 E-value=0.011 Score=66.64 Aligned_cols=73 Identities=15% Similarity=0.063 Sum_probs=45.0
Q ss_pred cEeeecCceEEEEEEeCC-CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEEEEEccCC
Q 043136 716 KILGMGSTGTVYKAEMPG-GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTMLLYEYMPN 793 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~-~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~ 793 (902)
+.|+.|-...+|++...+ ++.+++|+......... ...+|..+++.+. +.-.+++++++. + .+||||++|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i----dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII----NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS----CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc----CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 568888899999998755 47788887633211100 1136888887774 333467777763 2 259999987
Q ss_pred CCH
Q 043136 794 GNL 796 (902)
Q Consensus 794 gsL 796 (902)
..+
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 443
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.12 E-value=0.0032 Score=69.10 Aligned_cols=72 Identities=13% Similarity=0.121 Sum_probs=40.9
Q ss_pred cEeeecCceEEEEEEeCC---------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeE
Q 043136 716 KILGMGSTGTVYKAEMPG---------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTM 785 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~---------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~ 785 (902)
+.++.|..-.+|++...+ ++.+++|+........ .....|.++++.+. +.-++++++.. . -+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~----~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL----YNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT----SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce----ecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 457788888999997654 2678888764321110 11245777776663 22245666554 2 36
Q ss_pred EEEEccCCCC
Q 043136 786 LLYEYMPNGN 795 (902)
Q Consensus 786 lv~e~~~~gs 795 (902)
+||||++|..
T Consensus 111 ~v~e~i~G~~ 120 (369)
T 3c5i_A 111 RIEEWLYGDP 120 (369)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEecCCc
Confidence 8999998753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.00 E-value=0.0085 Score=64.81 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=28.1
Q ss_pred CCeEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 836 PVIVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 836 ~~ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
..++|+|+.+.||++++++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46999999999999998888999999887653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.38 E-value=0.029 Score=61.69 Aligned_cols=147 Identities=16% Similarity=0.207 Sum_probs=81.1
Q ss_pred cEeeecCceEEEEEEeCC--------CcEEEEEEecccchh--------hHHHH-------HHHHHHHHHHhcCC-cCee
Q 043136 716 KILGMGSTGTVYKAEMPG--------GEIIAVKKLWGKHKE--------NIRRR-------RGVLAEVDVLGNVR-HRNI 771 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~i~~~~~~--------~~~~~-------~~~~~Ei~il~~l~-h~nI 771 (902)
+.|..|-...+|++...+ ++.|.+++.-..... ....+ +....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999997653 367888876332110 00011 12335888887773 4456
Q ss_pred EeEEeEEecCCeeEEEEEccCCCCHHH--------------HH---HhhccCCCcccC--HHHHHHHHHHHH--------
Q 043136 772 VRLLGCCSNRECTMLLYEYMPNGNLDD--------------LL---HAKNKGENLVAD--WVTRYKIALGVA-------- 824 (902)
Q Consensus 772 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~qi~-------- 824 (902)
+++++++.. . +|+||++|..+.. .+ +.....-..... +....++..++.
T Consensus 138 Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 778877643 2 8999998744311 11 111000001112 122223332221
Q ss_pred --------------HHH----HHHHhC-CCCCeEEcCCCCCCEEEcCC------CCEEEeeccccee
Q 043136 825 --------------QGI----CYLHHD-CDPVIVHRDLKPSNILLDGE------MEARVADFGVAKL 866 (902)
Q Consensus 825 --------------~~L----~~LH~~-~~~~ivHrDlKp~NILl~~~------~~~kl~DFGla~~ 866 (902)
+.+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 23458999999999999877 7899999988764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.13 E-value=0.077 Score=58.83 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=44.8
Q ss_pred cEeeecCceEEEEEEeCC--------CcEEEEEEecccchhhHHHHHHHHHHHHHHhcCC-cCeeEeEEeEEecCCeeEE
Q 043136 716 KILGMGSTGTVYKAEMPG--------GEIIAVKKLWGKHKENIRRRRGVLAEVDVLGNVR-HRNIVRLLGCCSNRECTML 786 (902)
Q Consensus 716 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~i~~~~~~~~~~~~~~~~Ei~il~~l~-h~nIv~l~~~~~~~~~~~l 786 (902)
+.+..|-...+|++...+ ++.+++|+....... .....+|.++++.+. +.-.+++++.+. -++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----FYDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 456778888999997653 578888886432111 111235777776663 333456665442 368
Q ss_pred EEEccCCCC
Q 043136 787 LYEYMPNGN 795 (902)
Q Consensus 787 v~e~~~~gs 795 (902)
||||++|..
T Consensus 148 I~efI~G~~ 156 (424)
T 3mes_A 148 IEEFIDGEP 156 (424)
T ss_dssp EEECCCSEE
T ss_pred EEEEeCCcc
Confidence 999998855
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.40 E-value=0.92 Score=49.89 Aligned_cols=29 Identities=28% Similarity=0.437 Sum_probs=24.9
Q ss_pred eEEcCCCCCCEEE------cCCCCEEEeeccccee
Q 043136 838 IVHRDLKPSNILL------DGEMEARVADFGVAKL 866 (902)
Q Consensus 838 ivHrDlKp~NILl------~~~~~~kl~DFGla~~ 866 (902)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 4457799999998864
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=67.61 E-value=9.7 Score=37.42 Aligned_cols=86 Identities=9% Similarity=0.050 Sum_probs=58.8
Q ss_pred CcCeeEeEEeEEecCCeeEEEEEccCCCCHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEcCCCC
Q 043136 767 RHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGENLVADWVTRYKIALGVAQGIC-YLHHDCDPVIVHRDLKP 845 (902)
Q Consensus 767 ~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~-~LH~~~~~~ivHrDlKp 845 (902)
.||++ -..+-.+++.+.+.++.-+++-=...++. .+...+++++..|+...+ +++ .-+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~--------~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK--------TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT--------SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh--------cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 57888 34444677777777776544322233332 455777788887776555 444 257888999
Q ss_pred CCEEEcCCCCEEEeecccceec
Q 043136 846 SNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 846 ~NILl~~~~~~kl~DFGla~~~ 867 (902)
+||+++.++.+++.-.|+-..+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB
T ss_pred ceEEEeCCCcEEEEEcCCcccC
Confidence 9999999999999999874433
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.92 E-value=0.49 Score=53.09 Aligned_cols=61 Identities=7% Similarity=-0.043 Sum_probs=16.6
Q ss_pred CcEeeecCceEEEEEEeCC-CcEEEE------EEecccchhhHHHHHHHHHHHHHHhcCCcCeeEeEEeEEe
Q 043136 715 DKILGMGSTGTVYKAEMPG-GEIIAV------KKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCS 779 (902)
Q Consensus 715 ~~~iG~G~~g~Vy~~~~~~-~~~vav------K~i~~~~~~~~~~~~~~~~Ei~il~~l~h~nIv~l~~~~~ 779 (902)
.+.+| ||.||++.+.. ..+||| |..... .........+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~-~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD-GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccc-cccccccccccccccccccccccccCCCcceEE
Confidence 45666 99999997744 357888 654321 112233456788999999999999999887653
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=59.89 E-value=7 Score=38.28 Aligned_cols=93 Identities=10% Similarity=0.089 Sum_probs=63.8
Q ss_pred HHHHHhcCCcCeeEeEEeEEecCCeeEEEEEccCCC-CHHHHHHhhccCCCcccCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 043136 759 EVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNG-NLDDLLHAKNKGENLVADWVTRYKIALGVAQGICYLHHDCDPV 837 (902)
Q Consensus 759 Ei~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 837 (902)
|+..+.. .||+.+.. .+-.+++.+.+.++.-+.+ +... ++ ..+...+++++..|+...++++.
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~~~~----- 99 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEVNRT----- 99 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGGGGS-----
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHHhcC-----
Confidence 4454443 58888866 5666667766666654322 2322 22 24567788889988887765553
Q ss_pred eEEcCCCCCCEEEcCCCCEEEeecccceec
Q 043136 838 IVHRDLKPSNILLDGEMEARVADFGVAKLI 867 (902)
Q Consensus 838 ivHrDlKp~NILl~~~~~~kl~DFGla~~~ 867 (902)
-+|--+.|+||+++.++.+++.-.|+-..+
T Consensus 100 r~tf~L~P~NL~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 100 RYTFVLAPDELFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp SEECCCSGGGEEECTTSCEEESCCEETTTB
T ss_pred ceEEEEecceEEEcCCCCEEEEEccCccCC
Confidence 468889999999999999999999875443
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.73 E-value=1.2e+02 Score=25.34 Aligned_cols=42 Identities=12% Similarity=0.073 Sum_probs=19.5
Q ss_pred CCchhhhcccCCcEEeccCccCcCCCCcccCCCCCCCEEEccC
Q 043136 165 PLPLEFVQLNSLQQLNLGGSYFDGEIPSDYRNLSSLRFLDLAG 207 (902)
Q Consensus 165 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 207 (902)
+-..+|.++++|+.+.+-.+ ++..-..+|.++.+|+.+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33345555555555555433 2223334455555555555543
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.85 E-value=7.7e+02 Score=27.97 Aligned_cols=46 Identities=22% Similarity=0.091 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHH--HHHHHHhCCCCCeEEcCCCCCCEEEcCCCCEEEeecccce
Q 043136 813 WVTRYKIALGVAQ--GICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAK 865 (902)
Q Consensus 813 ~~~~~~i~~qi~~--~L~~LH~~~~~~ivHrDlKp~NILl~~~~~~kl~DFGla~ 865 (902)
+..+..+++.+|- .+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3444555555442 35566533 4778999999999999999999874
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.72 E-value=1.4e+02 Score=24.95 Aligned_cols=12 Identities=8% Similarity=0.296 Sum_probs=4.5
Q ss_pred cCCCCCCCEEEc
Q 043136 194 YRNLSSLRFLDL 205 (902)
Q Consensus 194 ~~~l~~L~~L~L 205 (902)
|.++++|+.+.+
T Consensus 16 F~~c~~L~~i~i 27 (100)
T 2lz0_A 16 FAGNTVIREITV 27 (100)
T ss_dssp TTTCTTCCCEEE
T ss_pred hcCCCCCcEEEc
Confidence 333333333333
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.79 E-value=4.9 Score=27.33 Aligned_cols=13 Identities=31% Similarity=0.462 Sum_probs=6.1
Q ss_pred cccceeeeehhhh
Q 043136 649 TAGAIVWIMAAAF 661 (902)
Q Consensus 649 ~~~~~v~i~~~~~ 661 (902)
..+++.++++..+
T Consensus 9 s~GaIAGiVvG~v 21 (38)
T 2k1k_A 9 TGGEIVAVIFGLL 21 (38)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CCCceeeeehHHH
Confidence 3445555554433
Done!