Query 043137
Match_columns 445
No_of_seqs 172 out of 1464
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 23:24:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otr_A Enolase; structural gen 100.0 4E-101 1E-105 773.0 45.1 441 1-443 1-445 (452)
2 3qtp_A Enolase 1; glycolysis, 100.0 6.6E-99 2E-103 757.1 46.5 431 3-442 6-440 (441)
3 3tqp_A Enolase; energy metabol 100.0 4E-93 1.4E-97 725.0 47.3 417 1-437 1-421 (428)
4 3uj2_A Enolase 1; enzyme funct 100.0 8.2E-93 2.8E-97 726.0 46.5 419 2-437 25-447 (449)
5 3qn3_A Enolase; structural gen 100.0 1.2E-92 4E-97 719.3 43.8 406 4-429 6-411 (417)
6 2al1_A Enolase 1, 2-phospho-D- 100.0 1.5E-90 5.2E-95 709.6 44.4 429 4-442 1-434 (436)
7 2akz_A Gamma enolase, neural; 100.0 8.3E-90 2.8E-94 704.7 44.1 428 4-442 1-431 (439)
8 2ptz_A Enolase; lyase, glycoly 100.0 1.3E-84 4.4E-89 667.3 44.2 426 3-438 4-431 (432)
9 2pa6_A Enolase; glycolysis, ly 100.0 3.4E-81 1.2E-85 643.3 46.6 419 2-441 8-426 (427)
10 2fym_A Enolase; RNA degradosom 100.0 6.8E-81 2.3E-85 641.1 47.3 422 3-442 1-431 (431)
11 1w6t_A Enolase; bacterial infe 100.0 1.1E-79 3.9E-84 633.5 45.5 418 4-440 13-441 (444)
12 4hnl_A Mandelate racemase/muco 100.0 1E-50 3.6E-55 416.4 28.1 312 2-399 25-350 (421)
13 1kcz_A Beta-methylaspartase; b 100.0 2.9E-51 9.8E-56 419.4 18.8 331 20-430 51-412 (413)
14 1kko_A 3-methylaspartate ammon 100.0 8.6E-51 2.9E-55 415.3 22.0 328 20-429 51-411 (413)
15 4dwd_A Mandelate racemase/muco 100.0 1.4E-49 4.8E-54 403.6 28.2 309 1-398 1-316 (393)
16 3fcp_A L-Ala-D/L-Glu epimerase 100.0 2.1E-49 7.3E-54 401.4 29.1 304 3-401 5-321 (381)
17 3dgb_A Muconate cycloisomerase 100.0 2.5E-49 8.4E-54 401.0 29.1 306 3-403 6-324 (382)
18 3sbf_A Mandelate racemase / mu 100.0 1.2E-49 4.1E-54 405.7 26.9 314 1-399 4-330 (401)
19 3i4k_A Muconate lactonizing en 100.0 5.4E-49 1.9E-53 398.7 30.5 305 3-402 6-323 (383)
20 2ox4_A Putative mandelate race 100.0 2.3E-49 7.7E-54 404.6 27.7 319 1-398 1-335 (403)
21 3tji_A Mandelate racemase/muco 100.0 1.7E-49 5.7E-54 406.4 26.2 313 2-399 26-351 (422)
22 2qq6_A Mandelate racemase/muco 100.0 1.6E-49 5.6E-54 406.4 25.8 322 1-398 4-336 (410)
23 3vcn_A Mannonate dehydratase; 100.0 7.8E-49 2.7E-53 402.0 28.9 311 3-399 24-356 (425)
24 3t6c_A RSPA, putative MAND fam 100.0 6.5E-49 2.2E-53 403.8 27.9 314 1-399 24-369 (440)
25 3v3w_A Starvation sensing prot 100.0 7E-49 2.4E-53 402.2 27.5 311 3-399 23-355 (424)
26 4hpn_A Putative uncharacterize 100.0 1.1E-48 3.7E-53 396.3 28.2 302 3-400 1-316 (378)
27 3r0u_A Enzyme of enolase super 100.0 5E-49 1.7E-53 397.7 25.7 298 1-397 1-314 (379)
28 3sjn_A Mandelate racemase/muco 100.0 1.2E-48 4.3E-53 394.9 28.4 303 1-399 1-321 (374)
29 3r4e_A Mandelate racemase/muco 100.0 7.2E-49 2.5E-53 401.6 26.8 311 2-399 16-349 (418)
30 3rcy_A Mandelate racemase/muco 100.0 2.4E-48 8.1E-53 398.8 29.2 317 3-398 2-327 (433)
31 4h1z_A Enolase Q92ZS5; dehydra 100.0 1.4E-48 4.8E-53 399.0 27.3 302 2-399 25-359 (412)
32 2gl5_A Putative dehydratase pr 100.0 2E-48 6.9E-53 398.5 28.0 321 1-399 1-345 (410)
33 3dip_A Enolase; structural gen 100.0 3.7E-48 1.3E-52 395.5 29.5 320 1-399 1-340 (410)
34 4e5t_A Mandelate racemase / mu 100.0 1.9E-48 6.6E-53 397.0 27.1 324 2-398 1-334 (404)
35 4e4u_A Mandalate racemase/muco 100.0 3.1E-48 1E-52 396.1 28.1 318 3-398 1-327 (412)
36 4h83_A Mandelate racemase/muco 100.0 6.5E-48 2.2E-52 391.3 28.3 301 2-399 19-332 (388)
37 2chr_A Chloromuconate cycloiso 100.0 3.4E-48 1.2E-52 391.7 25.5 304 3-402 1-317 (370)
38 2o56_A Putative mandelate race 100.0 4.6E-48 1.6E-52 395.4 26.5 319 2-399 3-342 (407)
39 2poz_A Putative dehydratase; o 100.0 3.4E-48 1.2E-52 394.5 25.2 317 1-399 1-326 (392)
40 3mqt_A Mandelate racemase/muco 100.0 9.8E-48 3.3E-52 390.8 27.8 310 2-399 4-328 (394)
41 4e4f_A Mannonate dehydratase; 100.0 7.3E-48 2.5E-52 394.7 26.2 312 2-399 22-357 (426)
42 1chr_A Chloromuconate cycloiso 100.0 4.1E-48 1.4E-52 390.8 23.5 304 3-402 1-317 (370)
43 3i6e_A Muconate cycloisomerase 100.0 1.4E-47 4.8E-52 388.5 27.4 302 3-403 8-322 (385)
44 3tcs_A Racemase, putative; PSI 100.0 1.7E-47 5.7E-52 387.5 27.7 301 2-399 22-326 (388)
45 3my9_A Muconate cycloisomerase 100.0 8.1E-48 2.8E-52 389.5 25.0 301 3-401 6-319 (377)
46 1wue_A Mandelate racemase/muco 100.0 1.2E-47 4.1E-52 389.5 26.1 296 1-397 18-325 (386)
47 3fv9_G Mandelate racemase/muco 100.0 1.4E-47 4.8E-52 388.4 26.6 302 1-399 1-320 (386)
48 3mkc_A Racemase; metabolic pro 100.0 1E-47 3.5E-52 390.5 25.6 311 1-399 8-333 (394)
49 3jva_A Dipeptide epimerase; en 100.0 1.8E-47 6.1E-52 383.8 26.8 301 3-405 1-316 (354)
50 3rr1_A GALD, putative D-galact 100.0 1.3E-47 4.4E-52 390.5 24.5 301 3-399 2-305 (405)
51 1tkk_A Similar to chloromucona 100.0 4.4E-47 1.5E-51 383.0 27.6 302 3-402 1-316 (366)
52 3ozy_A Putative mandelate race 100.0 1.9E-47 6.6E-52 388.0 25.0 303 1-399 1-323 (389)
53 3ik4_A Mandelate racemase/muco 100.0 4.9E-47 1.7E-51 381.9 27.6 296 3-399 5-316 (365)
54 3gd6_A Muconate cycloisomerase 100.0 5.5E-47 1.9E-51 384.9 27.7 304 3-397 1-311 (391)
55 4dxk_A Mandelate racemase / mu 100.0 2.4E-47 8.3E-52 388.4 25.1 321 3-399 1-337 (400)
56 3vdg_A Probable glucarate dehy 100.0 6.9E-47 2.4E-51 388.4 27.8 315 2-398 27-362 (445)
57 4a35_A Mitochondrial enolase s 100.0 2.4E-47 8.2E-52 392.0 24.1 307 2-396 4-371 (441)
58 3ro6_B Putative chloromuconate 100.0 1.4E-47 4.6E-52 385.0 21.7 297 3-398 1-312 (356)
59 3tj4_A Mandelate racemase; eno 100.0 4.5E-47 1.5E-51 383.2 25.6 304 3-399 1-321 (372)
60 3q45_A Mandelate racemase/muco 100.0 5.1E-47 1.8E-51 382.3 25.4 300 3-402 1-313 (368)
61 4e8g_A Enolase, mandelate race 100.0 1.9E-46 6.5E-51 380.4 29.5 299 2-399 22-335 (391)
62 3go2_A Putative L-alanine-DL-g 100.0 1.8E-46 6E-51 383.1 29.4 321 1-399 1-337 (409)
63 3dg3_A Muconate cycloisomerase 100.0 1.5E-46 5.2E-51 378.8 28.5 296 3-398 1-311 (367)
64 3s5s_A Mandelate racemase/muco 100.0 6.2E-47 2.1E-51 383.9 25.7 297 3-399 5-317 (389)
65 3stp_A Galactonate dehydratase 100.0 2.5E-47 8.6E-52 388.9 22.9 303 2-399 22-352 (412)
66 3mwc_A Mandelate racemase/muco 100.0 1.9E-46 6.6E-51 381.6 29.1 299 3-398 7-329 (400)
67 3eez_A Putative mandelate race 100.0 5.4E-47 1.8E-51 383.3 24.7 297 1-399 1-314 (378)
68 3u9i_A Mandelate racemase/muco 100.0 2.1E-47 7E-52 387.7 21.6 305 2-399 26-346 (393)
69 3qld_A Mandelate racemase/muco 100.0 7.8E-47 2.7E-51 383.0 25.7 295 3-398 1-314 (388)
70 1nu5_A Chloromuconate cycloiso 100.0 1.7E-46 5.9E-51 379.2 28.1 304 3-403 1-318 (370)
71 1wuf_A Hypothetical protein LI 100.0 4.2E-47 1.4E-51 386.2 23.6 295 2-397 19-325 (393)
72 2p8b_A Mandelate racemase/muco 100.0 1.2E-46 4E-51 380.3 25.7 303 3-403 1-316 (369)
73 3vc5_A Mandelate racemase/muco 100.0 1.5E-46 5.2E-51 385.7 26.6 315 2-398 22-357 (441)
74 2qde_A Mandelate racemase/muco 100.0 3.6E-46 1.2E-50 380.0 29.0 301 1-398 1-316 (397)
75 3ekg_A Mandelate racemase/muco 100.0 3.6E-46 1.2E-50 378.0 27.3 276 20-399 59-334 (404)
76 2qgy_A Enolase from the enviro 100.0 6.7E-46 2.3E-50 377.3 29.3 304 1-399 9-322 (391)
77 3toy_A Mandelate racemase/muco 100.0 2.6E-46 9E-51 378.6 25.8 296 3-399 27-335 (383)
78 4dye_A Isomerase; enolase fami 100.0 9.9E-47 3.4E-51 383.1 21.8 302 3-401 24-338 (398)
79 3ddm_A Putative mandelate race 100.0 2.7E-46 9.2E-51 379.6 24.9 299 3-399 10-327 (392)
80 3cyj_A Mandelate racemase/muco 100.0 7.7E-46 2.6E-50 374.5 27.0 293 3-399 6-311 (372)
81 3ugv_A Enolase; enzyme functio 100.0 4.7E-46 1.6E-50 377.6 24.8 299 3-399 28-341 (390)
82 2ovl_A Putative racemase; stru 100.0 2.8E-45 9.6E-50 370.3 30.0 299 3-399 2-313 (371)
83 2pp0_A L-talarate/galactarate 100.0 4.1E-46 1.4E-50 379.5 23.6 301 2-400 25-343 (398)
84 2zad_A Muconate cycloisomerase 100.0 6.6E-46 2.3E-50 371.5 23.7 294 3-399 2-311 (345)
85 3fxg_A Rhamnonate dehydratase; 100.0 5.4E-46 1.9E-50 380.2 23.1 274 21-399 66-339 (455)
86 2qdd_A Mandelate racemase/muco 100.0 2.6E-45 9.1E-50 371.4 27.9 298 1-399 1-314 (378)
87 2ps2_A Putative mandelate race 100.0 3.8E-45 1.3E-49 369.4 28.4 296 1-398 1-313 (371)
88 2gdq_A YITF; mandelate racemas 100.0 2.4E-45 8.3E-50 372.1 26.8 297 2-401 3-312 (382)
89 1r0m_A N-acylamino acid racema 100.0 2.3E-45 7.8E-50 371.6 26.3 295 1-397 6-312 (375)
90 3bjs_A Mandelate racemase/muco 100.0 3.1E-45 1.1E-49 376.0 27.7 304 1-399 37-357 (428)
91 3p0w_A Mandelate racemase/muco 100.0 2.7E-45 9.3E-50 379.0 26.7 313 1-399 6-375 (470)
92 3va8_A Probable dehydratase; e 100.0 1.5E-45 5.1E-50 378.5 24.5 312 3-398 27-360 (445)
93 2nql_A AGR_PAT_674P, isomerase 100.0 5.1E-45 1.7E-49 370.5 27.5 301 1-398 1-332 (388)
94 1sjd_A N-acylamino acid racema 100.0 5.7E-45 1.9E-49 367.8 27.7 294 3-397 1-306 (368)
95 2rdx_A Mandelate racemase/muco 100.0 5.6E-45 1.9E-49 369.2 27.6 297 1-399 1-312 (379)
96 3mzn_A Glucarate dehydratase; 100.0 6.2E-45 2.1E-49 375.0 28.1 315 2-399 4-357 (450)
97 1rvk_A Isomerase/lactonizing e 100.0 7.9E-45 2.7E-49 368.5 27.4 307 3-400 1-324 (382)
98 2zc8_A N-acylamino acid racema 100.0 6.6E-45 2.3E-49 367.5 25.2 293 3-397 1-305 (369)
99 4h2h_A Mandelate racemase/muco 100.0 1.2E-44 4.3E-49 366.0 27.1 296 2-398 9-320 (376)
100 2og9_A Mandelate racemase/muco 100.0 1.3E-44 4.5E-49 368.0 26.0 301 2-400 12-330 (393)
101 1mdl_A Mandelate racemase; iso 100.0 9.1E-45 3.1E-49 365.2 23.2 296 3-399 4-311 (359)
102 3pfr_A Mandelate racemase/muco 100.0 2E-44 7E-49 371.6 25.4 314 2-399 8-360 (455)
103 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 3E-45 1E-49 370.8 18.5 297 19-403 30-340 (377)
104 2pgw_A Muconate cycloisomerase 100.0 2.1E-44 7.2E-49 365.6 24.8 298 1-399 1-318 (384)
105 2p3z_A L-rhamnonate dehydratas 100.0 4.7E-44 1.6E-48 364.9 26.3 275 21-399 71-345 (415)
106 4g8t_A Glucarate dehydratase; 100.0 4.6E-43 1.6E-47 362.8 26.2 321 4-398 27-376 (464)
107 2hzg_A Mandelate racemase/muco 100.0 7.7E-44 2.6E-48 363.3 19.0 303 1-398 1-320 (401)
108 1tzz_A Hypothetical protein L1 100.0 3.2E-43 1.1E-47 357.8 23.4 306 1-400 4-340 (392)
109 2hxt_A L-fuconate dehydratase; 100.0 3.5E-43 1.2E-47 362.6 22.6 303 3-395 2-365 (441)
110 3ijl_A Muconate cycloisomerase 100.0 2.6E-43 8.9E-48 351.2 18.7 275 19-403 26-302 (338)
111 3p3b_A Mandelate racemase/muco 100.0 5.3E-42 1.8E-46 348.6 19.1 295 1-401 10-330 (392)
112 3v5c_A Mandelate racemase/muco 100.0 6E-41 2.1E-45 340.1 26.3 293 2-399 11-330 (392)
113 2oz8_A MLL7089 protein; struct 100.0 1.7E-41 5.8E-46 344.6 21.1 292 1-399 1-311 (389)
114 2okt_A OSB synthetase, O-succi 100.0 7.9E-41 2.7E-45 334.1 16.8 275 2-397 1-287 (342)
115 1jpd_X L-Ala-D/L-Glu epimerase 100.0 3.3E-39 1.1E-43 320.1 16.1 282 4-401 3-297 (324)
116 4gfi_A Mandelate racemase/muco 100.0 2.3E-36 7.9E-41 300.3 17.2 269 20-405 31-299 (329)
117 2ozt_A TLR1174 protein; struct 100.0 3.8E-36 1.3E-40 298.9 17.0 258 19-400 28-292 (332)
118 1r6w_A OSB synthase, O-succiny 100.0 8.5E-36 2.9E-40 295.2 14.2 266 4-399 2-284 (322)
119 3caw_A O-succinylbenzoate synt 100.0 4.9E-33 1.7E-37 276.4 19.4 252 3-396 2-268 (330)
120 2opj_A O-succinylbenzoate-COA 99.9 6.5E-26 2.2E-30 224.4 14.3 138 224-399 108-247 (327)
121 3hgj_A Chromate reductase; TIM 96.9 0.0065 2.2E-07 59.9 11.6 73 277-353 234-318 (349)
122 1z41_A YQJM, probable NADH-dep 96.1 0.046 1.6E-06 53.5 12.1 73 277-353 224-307 (338)
123 3kru_A NADH:flavin oxidoreduct 96.0 0.13 4.3E-06 50.5 14.7 70 278-352 226-306 (343)
124 3aty_A Tcoye, prostaglandin F2 95.4 0.05 1.7E-06 54.1 9.2 70 278-353 262-336 (379)
125 3l5l_A Xenobiotic reductase A; 95.4 0.06 2E-06 53.2 9.7 70 279-352 243-324 (363)
126 1icp_A OPR1, 12-oxophytodienoa 95.2 0.041 1.4E-06 54.7 7.8 71 278-353 252-330 (376)
127 3noy_A 4-hydroxy-3-methylbut-2 95.1 0.15 5.1E-06 49.6 11.3 97 280-382 44-141 (366)
128 1vyr_A Pentaerythritol tetrani 95.0 0.1 3.5E-06 51.6 10.3 71 278-353 247-323 (364)
129 1ps9_A 2,4-dienoyl-COA reducta 94.9 0.073 2.5E-06 56.9 9.4 72 277-352 223-309 (671)
130 2gou_A Oxidoreductase, FMN-bin 93.4 0.45 1.6E-05 46.9 11.0 71 278-353 246-322 (365)
131 2r14_A Morphinone reductase; H 93.4 0.33 1.1E-05 48.1 9.9 71 278-353 251-328 (377)
132 3gka_A N-ethylmaleimide reduct 93.1 0.3 1E-05 48.1 8.9 68 280-352 248-315 (361)
133 4ab4_A Xenobiotic reductase B; 93.0 0.3 1E-05 48.1 8.9 67 281-352 241-307 (362)
134 3gr7_A NADPH dehydrogenase; fl 92.3 0.68 2.3E-05 45.1 10.3 72 278-353 225-307 (340)
135 2hsa_B 12-oxophytodienoate red 90.3 0.82 2.8E-05 45.7 8.7 71 278-353 256-348 (402)
136 3lab_A Putative KDPG (2-keto-3 88.8 0.71 2.4E-05 41.9 6.3 109 280-405 23-138 (217)
137 3l5a_A NADH/flavin oxidoreduct 87.0 3.8 0.00013 41.0 11.0 72 278-353 260-346 (419)
138 1ydn_A Hydroxymethylglutaryl-C 84.5 3.9 0.00013 38.7 9.3 123 278-407 22-176 (295)
139 1f76_A Dihydroorotate dehydrog 83.9 4.5 0.00015 39.0 9.6 45 309-355 276-320 (336)
140 1o94_A Tmadh, trimethylamine d 83.9 4 0.00014 43.8 10.1 42 308-352 279-320 (729)
141 4e38_A Keto-hydroxyglutarate-a 82.6 2.7 9.2E-05 38.5 7.0 109 280-405 44-153 (232)
142 4af0_A Inosine-5'-monophosphat 80.4 8.8 0.0003 39.5 10.4 94 309-409 310-416 (556)
143 1wa3_A 2-keto-3-deoxy-6-phosph 79.6 13 0.00044 32.7 10.4 91 280-381 20-111 (205)
144 3k30_A Histamine dehydrogenase 77.5 8.9 0.00031 40.7 10.1 71 277-352 239-323 (690)
145 3eeg_A 2-isopropylmalate synth 76.3 8.6 0.00029 37.0 8.7 129 278-410 24-175 (325)
146 1i4n_A Indole-3-glycerol phosp 75.2 12 0.00042 34.5 9.1 97 278-381 60-157 (251)
147 3f4w_A Putative hexulose 6 pho 73.6 32 0.0011 30.1 11.3 119 280-406 11-134 (211)
148 4g9p_A 4-hydroxy-3-methylbut-2 70.9 16 0.00055 36.0 9.0 87 295-384 52-147 (406)
149 1pii_A N-(5'phosphoribosyl)ant 69.9 20 0.00069 36.1 9.8 97 278-381 67-164 (452)
150 2e6f_A Dihydroorotate dehydrog 69.6 15 0.00053 34.6 8.7 44 309-355 232-275 (314)
151 3tsm_A IGPS, indole-3-glycerol 67.7 40 0.0014 31.4 10.8 95 278-381 78-176 (272)
152 1nvm_A HOA, 4-hydroxy-2-oxoval 66.6 50 0.0017 31.7 11.8 126 277-407 25-170 (345)
153 3ble_A Citramalate synthase fr 65.0 54 0.0018 31.4 11.5 124 278-407 37-190 (337)
154 3b0p_A TRNA-dihydrouridine syn 61.5 70 0.0024 30.7 11.7 67 281-353 143-225 (350)
155 1ydo_A HMG-COA lyase; TIM-barr 61.0 41 0.0014 31.8 9.7 124 277-407 23-178 (307)
156 3tdn_A FLR symmetric alpha-bet 60.3 14 0.00047 33.7 6.1 44 306-353 65-108 (247)
157 2ftp_A Hydroxymethylglutaryl-C 58.6 41 0.0014 31.6 9.3 124 277-407 25-180 (302)
158 2c6q_A GMP reductase 2; TIM ba 57.4 84 0.0029 30.2 11.4 94 309-409 149-255 (351)
159 1jub_A Dihydroorotate dehydrog 56.3 25 0.00087 33.0 7.4 57 309-367 229-286 (311)
160 1vhn_A Putative flavin oxidore 54.9 11 0.00037 36.0 4.5 63 289-356 146-216 (318)
161 2cw6_A Hydroxymethylglutaryl-C 53.3 45 0.0015 31.2 8.6 124 277-407 22-177 (298)
162 1zco_A 2-dehydro-3-deoxyphosph 50.9 76 0.0026 29.2 9.5 92 282-381 73-165 (262)
163 3ewb_X 2-isopropylmalate synth 50.3 90 0.0031 29.2 10.1 129 277-409 22-173 (293)
164 3zwt_A Dihydroorotate dehydrog 50.2 58 0.002 31.7 9.0 57 309-367 285-342 (367)
165 3rmj_A 2-isopropylmalate synth 50.0 50 0.0017 32.2 8.5 128 278-409 30-180 (370)
166 3tml_A 2-dehydro-3-deoxyphosph 49.9 43 0.0015 31.4 7.6 88 279-374 71-158 (288)
167 2r6o_A Putative diguanylate cy 49.7 1.6E+02 0.0055 27.2 12.1 92 312-412 169-270 (294)
168 4ef8_A Dihydroorotate dehydrog 48.3 77 0.0026 30.7 9.4 45 307-354 263-307 (354)
169 1vs1_A 3-deoxy-7-phosphoheptul 47.7 1.1E+02 0.0037 28.5 10.0 92 282-381 88-180 (276)
170 2qkf_A 3-deoxy-D-manno-octulos 47.6 73 0.0025 29.7 8.9 95 280-382 70-165 (280)
171 3igs_A N-acetylmannosamine-6-p 47.0 54 0.0018 29.6 7.7 94 280-381 34-136 (232)
172 2wqp_A Polysialic acid capsule 46.3 40 0.0014 32.6 6.9 92 279-379 88-179 (349)
173 4avf_A Inosine-5'-monophosphat 46.2 1.4E+02 0.0046 30.2 11.3 106 295-407 240-362 (490)
174 1w1z_A Delta-aminolevulinic ac 43.4 1.2E+02 0.004 28.8 9.3 126 227-379 174-316 (328)
175 1o60_A 2-dehydro-3-deoxyphosph 43.0 86 0.0029 29.4 8.6 94 281-382 74-168 (292)
176 1vzw_A Phosphoribosyl isomeras 42.6 88 0.003 27.9 8.5 44 307-353 177-222 (244)
177 2ekc_A AQ_1548, tryptophan syn 42.5 1.1E+02 0.0038 27.9 9.3 116 280-405 29-176 (262)
178 1yxy_A Putative N-acetylmannos 41.9 1.4E+02 0.0046 26.4 9.6 44 305-353 172-215 (234)
179 1vr6_A Phospho-2-dehydro-3-deo 41.8 1.6E+02 0.0054 28.4 10.4 91 282-380 156-247 (350)
180 3q58_A N-acetylmannosamine-6-p 41.3 62 0.0021 29.1 7.1 94 280-381 34-136 (229)
181 1jvn_A Glutamine, bifunctional 41.1 25 0.00086 36.3 4.9 68 307-377 483-550 (555)
182 1qop_A Tryptophan synthase alp 40.1 84 0.0029 28.8 8.0 92 280-378 29-151 (268)
183 3vk5_A MOEO5; TIM barrel, tran 39.6 1.2E+02 0.004 28.4 8.7 63 288-355 191-258 (286)
184 3ffs_A Inosine-5-monophosphate 39.5 95 0.0032 30.6 8.6 91 309-407 173-276 (400)
185 3sz8_A 2-dehydro-3-deoxyphosph 38.6 97 0.0033 29.0 8.1 35 278-312 73-107 (285)
186 1vrd_A Inosine-5'-monophosphat 38.5 1.6E+02 0.0054 29.5 10.5 94 307-407 264-370 (494)
187 1h7n_A 5-aminolaevulinic acid 38.3 1.7E+02 0.0057 28.0 9.6 129 227-380 183-328 (342)
188 3ivs_A Homocitrate synthase, m 38.2 3E+02 0.01 27.1 13.6 126 277-407 56-201 (423)
189 4a3u_A NCR, NADH\:flavin oxido 37.7 1.2E+02 0.004 29.2 8.9 37 312-352 278-314 (358)
190 3qfe_A Putative dihydrodipicol 37.5 2.2E+02 0.0074 26.8 10.6 125 226-381 63-202 (318)
191 4fo4_A Inosine 5'-monophosphat 36.4 1.8E+02 0.0062 28.1 10.0 92 309-407 137-241 (366)
192 4fxs_A Inosine-5'-monophosphat 36.3 2.3E+02 0.0079 28.5 11.2 95 307-408 258-365 (496)
193 2agk_A 1-(5-phosphoribosyl)-5- 35.8 40 0.0014 31.0 5.0 46 307-355 188-238 (260)
194 2i9x_A Putative septation prot 35.1 39 0.0013 25.7 3.9 29 2-31 3-31 (87)
195 3jr2_A Hexulose-6-phosphate sy 35.1 2E+02 0.0068 25.2 9.5 93 280-378 17-113 (218)
196 1ka9_F Imidazole glycerol phos 35.0 42 0.0014 30.2 5.0 66 308-377 184-249 (252)
197 1jcn_A Inosine monophosphate d 34.8 1.6E+02 0.0055 29.7 9.9 110 292-408 263-389 (514)
198 3qja_A IGPS, indole-3-glycerol 34.8 65 0.0022 29.8 6.3 94 279-381 72-169 (272)
199 1ujp_A Tryptophan synthase alp 34.0 1.4E+02 0.0049 27.4 8.6 89 310-406 81-174 (271)
200 3fs2_A 2-dehydro-3-deoxyphosph 33.9 87 0.003 29.5 7.0 88 279-374 95-182 (298)
201 1wbh_A KHG/KDPG aldolase; lyas 33.8 2.1E+02 0.0072 25.2 9.4 109 280-405 26-135 (214)
202 2nwr_A 2-dehydro-3-deoxyphosph 33.8 1.6E+02 0.0055 27.1 8.7 96 279-382 58-154 (267)
203 2w6r_A Imidazole glycerol phos 33.4 37 0.0013 30.9 4.4 66 308-377 188-253 (266)
204 2qr6_A IMP dehydrogenase/GMP r 33.2 1E+02 0.0035 29.9 7.8 40 308-352 199-238 (393)
205 1w8s_A FBP aldolase, fructose- 32.7 57 0.002 30.0 5.5 74 338-412 98-185 (263)
206 3q58_A N-acetylmannosamine-6-p 32.5 2.5E+02 0.0084 25.0 9.7 41 307-352 169-209 (229)
207 3igs_A N-acetylmannosamine-6-p 32.5 2.7E+02 0.0092 24.8 10.2 42 307-353 169-210 (232)
208 1vc4_A Indole-3-glycerol phosp 31.8 82 0.0028 28.8 6.4 93 279-381 65-161 (254)
209 3nav_A Tryptophan synthase alp 31.6 3.1E+02 0.011 25.2 10.6 117 280-405 32-179 (271)
210 3t05_A Pyruvate kinase, PK; te 31.5 2.6E+02 0.0088 29.1 10.6 141 278-422 190-353 (606)
211 2cu0_A Inosine-5'-monophosphat 31.0 1.2E+02 0.004 30.6 7.9 91 309-409 257-360 (486)
212 1l6s_A Porphobilinogen synthas 30.9 1.5E+02 0.0051 28.0 7.9 127 227-380 168-310 (323)
213 3khj_A Inosine-5-monophosphate 30.6 1.9E+02 0.0066 27.8 9.2 91 309-407 134-237 (361)
214 1vli_A Spore coat polysacchari 30.5 53 0.0018 32.2 5.0 35 279-314 98-132 (385)
215 1pv8_A Delta-aminolevulinic ac 30.5 2.1E+02 0.0071 27.2 8.8 127 228-380 173-317 (330)
216 3usb_A Inosine-5'-monophosphat 30.2 1.7E+02 0.0059 29.6 9.1 100 302-408 278-390 (511)
217 1mzh_A Deoxyribose-phosphate a 30.1 2.1E+02 0.0071 25.4 8.7 70 278-350 128-201 (225)
218 3obk_A Delta-aminolevulinic ac 29.9 1.9E+02 0.0066 27.7 8.5 128 227-380 187-331 (356)
219 1eep_A Inosine 5'-monophosphat 29.6 1.9E+02 0.0065 28.1 9.1 92 309-407 182-286 (404)
220 3nvt_A 3-deoxy-D-arabino-heptu 29.4 1.4E+02 0.0049 29.1 8.0 91 283-381 193-284 (385)
221 2vp8_A Dihydropteroate synthas 29.2 3.7E+02 0.013 25.4 11.1 110 250-385 48-171 (318)
222 1geq_A Tryptophan synthase alp 29.1 2.5E+02 0.0086 24.8 9.3 45 304-352 175-219 (248)
223 3s83_A Ggdef family protein; s 29.1 1.6E+02 0.0054 26.3 7.9 62 323-388 153-221 (259)
224 3g8r_A Probable spore coat pol 28.6 79 0.0027 30.6 5.8 31 284-314 79-109 (350)
225 2i9z_A Putative septation prot 28.6 62 0.0021 25.5 4.2 29 2-31 3-31 (105)
226 3ajx_A 3-hexulose-6-phosphate 28.1 2.8E+02 0.0096 23.6 10.8 94 280-379 11-108 (207)
227 3e96_A Dihydrodipicolinate syn 27.5 3.6E+02 0.012 25.2 10.4 111 226-369 64-182 (316)
228 1vzw_A Phosphoribosyl isomeras 27.3 1.8E+02 0.0062 25.7 7.9 41 310-354 65-105 (244)
229 3nmy_A Xometc, cystathionine g 27.3 1.2E+02 0.0042 29.3 7.2 96 282-382 92-190 (400)
230 3oa3_A Aldolase; structural ge 27.1 3.5E+02 0.012 25.2 9.8 87 278-377 184-279 (288)
231 2ztj_A Homocitrate synthase; ( 27.0 4.3E+02 0.015 25.4 11.3 123 277-405 20-163 (382)
232 4f3h_A Fimxeal, putative uncha 26.7 2.5E+02 0.0084 24.9 8.7 62 323-388 157-225 (250)
233 3vzx_A Heptaprenylglyceryl pho 26.7 3.5E+02 0.012 24.2 10.5 81 280-367 138-222 (228)
234 3fdb_A Beta C-S lyase, putativ 26.3 1.8E+02 0.0062 27.0 8.1 94 282-381 91-190 (377)
235 3p6l_A Sugar phosphate isomera 26.2 3.1E+02 0.011 24.1 9.4 62 361-427 63-127 (262)
236 1vhc_A Putative KHG/KDPG aldol 26.1 3.4E+02 0.012 24.0 10.4 109 280-405 27-136 (224)
237 2ia9_A Putative septation prot 26.1 68 0.0023 25.0 3.9 29 2-31 3-31 (100)
238 1yxy_A Putative N-acetylmannos 25.9 1.3E+02 0.0045 26.5 6.7 108 283-403 37-157 (234)
239 3qtg_A Pyruvate kinase, PK; TI 25.3 3.6E+02 0.012 26.9 10.1 125 278-405 178-321 (461)
240 3gg8_A Pyruvate kinase; malari 25.1 2.3E+02 0.008 28.7 8.8 125 278-405 204-346 (511)
241 1wv2_A Thiazole moeity, thiazo 24.8 96 0.0033 28.7 5.3 60 289-353 149-216 (265)
242 1thf_D HISF protein; thermophI 24.6 52 0.0018 29.6 3.6 66 308-377 183-248 (253)
243 3e9k_A Kynureninase; kynurenin 24.5 1.6E+02 0.0054 28.8 7.5 101 281-381 137-251 (465)
244 1w5q_A Delta-aminolevulinic ac 24.3 3.6E+02 0.012 25.6 9.2 126 227-380 179-323 (337)
245 1mxs_A KDPG aldolase; 2-keto-3 24.2 3.2E+02 0.011 24.2 8.8 109 280-405 36-145 (225)
246 1me8_A Inosine-5'-monophosphat 24.1 1.7E+02 0.0059 29.5 7.8 95 308-408 270-383 (503)
247 3r2g_A Inosine 5'-monophosphat 24.1 4.3E+02 0.015 25.4 10.2 41 309-353 129-169 (361)
248 1gvf_A Tagatose-bisphosphate a 23.6 1.6E+02 0.0054 27.5 6.7 65 313-382 67-138 (286)
249 2nli_A Lactate oxidase; flavoe 23.6 3.9E+02 0.013 25.6 9.9 95 307-409 216-316 (368)
250 4eb5_C NIFU protein (NIFU-1); 23.6 84 0.0029 26.5 4.4 65 73-141 66-131 (153)
251 4drs_A Pyruvate kinase; glycol 23.5 3.6E+02 0.012 27.5 9.8 125 278-405 212-361 (526)
252 1pii_A N-(5'phosphoribosyl)ant 22.7 5.7E+02 0.02 25.3 13.0 103 228-367 144-252 (452)
253 1qo2_A Molecule: N-((5-phospho 22.6 98 0.0034 27.6 5.1 42 308-352 176-222 (241)
254 1y0e_A Putative N-acetylmannos 22.1 1E+02 0.0035 26.9 5.1 42 308-353 163-204 (223)
255 1h5y_A HISF; histidine biosynt 22.1 93 0.0032 27.5 4.8 42 308-353 65-106 (253)
256 3w01_A Heptaprenylglyceryl pho 21.9 4E+02 0.014 23.9 8.9 80 280-366 143-227 (235)
257 3l0g_A Nicotinate-nucleotide p 21.7 2.4E+02 0.0084 26.4 7.6 87 310-409 196-282 (300)
258 3i65_A Dihydroorotate dehydrog 21.6 48 0.0016 32.9 2.8 45 309-355 332-376 (415)
259 3oix_A Putative dihydroorotate 21.4 51 0.0017 31.8 2.9 58 309-368 262-320 (345)
260 3glc_A Aldolase LSRF; TIM barr 21.4 2.1E+02 0.0071 26.8 7.2 70 338-408 131-211 (295)
261 1tv5_A Dhodehase, dihydroorota 21.3 97 0.0033 31.0 5.0 45 309-355 360-404 (443)
262 2d73_A Alpha-glucosidase SUSB; 20.9 1.9E+02 0.0066 30.8 7.4 92 336-427 374-500 (738)
263 1h5y_A HISF; histidine biosynt 20.9 1E+02 0.0036 27.2 4.9 66 308-377 186-251 (253)
264 3n0l_A Serine hydroxymethyltra 20.9 2.2E+02 0.0074 26.9 7.5 99 283-381 98-199 (417)
265 4fb5_A Probable oxidoreductase 20.6 1.2E+02 0.0041 28.8 5.5 47 335-383 108-154 (393)
266 2f6u_A GGGPS, (S)-3-O-geranylg 20.4 3.8E+02 0.013 24.0 8.5 66 280-352 147-217 (234)
267 1t3i_A Probable cysteine desul 20.3 3.7E+02 0.013 25.2 9.1 99 282-381 100-206 (420)
268 3paj_A Nicotinate-nucleotide p 20.3 3.3E+02 0.011 25.8 8.3 85 310-407 220-304 (320)
269 2yxb_A Coenzyme B12-dependent 20.1 1.8E+02 0.0062 24.3 5.9 49 334-382 57-108 (161)
No 1
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-101 Score=773.04 Aligned_cols=441 Identities=63% Similarity=1.033 Sum_probs=421.9
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhh
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL 79 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~L 79 (445)
|+ +|++|++|+|+||+|+|||+|+|+|++|++ ++++|+|+|||.+|+.++||+++. |.|+++..+++.|++.|+|.|
T Consensus 1 m~-~I~~i~areildSrGnpTvEv~v~~~~G~~-ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~L 78 (452)
T 3otr_A 1 MV-VIKDIVAREILDSRGNPTIEVDVSTEGGVF-RAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPAL 78 (452)
T ss_dssp CC-CCCEEEEEEEECTTSCEEEEEEEEETTEEE-EEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHH
T ss_pred CC-cceEEEEEEEEcCCCCEEEEEEEEECCccE-EEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 54 899999999999999999999999999987 999999999999999999999865 999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC--cceeeeeeEE
Q 043137 80 AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFN 157 (445)
Q Consensus 80 iG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~--~~~vp~~~~~ 157 (445)
+|+|+.+|+.||+.|.+.+++++|.|+|+.+.+|.||+.|||+|++.+.|+..|+|||+|||.++|.. ...+|+|+++
T Consensus 79 ig~d~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~n 158 (452)
T 3otr_A 79 LGKDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFN 158 (452)
T ss_dssp TTCCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEE
T ss_pred cCCChHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEE
Confidence 99999999999999986899999999999999999999999999999999999999999999877765 5689999999
Q ss_pred eecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHH
Q 043137 158 VINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAI 237 (445)
Q Consensus 158 ~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av 237 (445)
+++||.|+++++++||||++|.++.+++|+++++.++|+++|+.||.|+|...+.+|++|+|.|++++.++.|+++.+|+
T Consensus 159 vinGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai 238 (452)
T 3otr_A 159 VINGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAI 238 (452)
T ss_dssp EEECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHH
T ss_pred EecCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHhCCCCCeEEEEeccccccccCCc-eeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHH
Q 043137 238 AKAGYTGKVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLT 316 (445)
Q Consensus 238 ~~~g~~~~i~l~vD~~a~~~~~~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~ 316 (445)
+++||+++|.|++|+++++||+..+ +|+++|++|+.+.+..+|++|++++|.+++++|||.||||||+++|+++|++|+
T Consensus 239 ~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt 318 (452)
T 3otr_A 239 KAAGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFT 318 (452)
T ss_dssp HHHTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHH
T ss_pred HHcCCCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHH
Confidence 9999987999999999999995322 899999887766667899999999999999999999999999999999999999
Q ss_pred HHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHh
Q 043137 317 SEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSV 396 (445)
Q Consensus 317 ~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~ 396 (445)
++++.++||+|||++++++++++++++.+++|+++||++|+||||++++++++|+++|+.+|++|+++||+|++++||||
T Consensus 319 ~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvshrSGETeD~~iAdLaV 398 (452)
T 3otr_A 319 KDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFIADLVV 398 (452)
T ss_dssp HHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHH
T ss_pred HhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchhHHHHHHH
Confidence 99988899999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCccccCCCCCchhHHHHHHHHHHHHHhCccccccccccCCCCC
Q 043137 397 GLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVE 443 (445)
Q Consensus 397 a~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~~~~ 443 (445)
|++++|+|.|+|+|+||++||||||||||||+++++|.+.+||+|+.
T Consensus 399 gl~~gqIKtGap~rsER~aKyNqLlrIeeelg~~a~~~g~~~~~~~~ 445 (452)
T 3otr_A 399 GLRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGESFRHPKR 445 (452)
T ss_dssp HTTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGTTSCC-
T ss_pred HcCCCccccCCCcchhHHHHHHHHHHHHHHhCccceecccccCCCcc
Confidence 99999999999999999999999999999999999999999999985
No 2
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=6.6e-99 Score=757.05 Aligned_cols=431 Identities=61% Similarity=0.978 Sum_probs=412.7
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhhcC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
|.|++|++|+|+||+|+|||+|+|+|++|.+ ++++|+|+|||.+|+.++||+++. |.|+++..+++.|++.|+|.|+|
T Consensus 6 m~I~~i~ar~ildsrGnptvev~v~~~~g~~-ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Lig 84 (441)
T 3qtp_A 6 MSIQKVHAREILDSRGNPTIEVEITTGKGMF-RSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLG 84 (441)
T ss_dssp TBCCEEEEEEEECTTSCEEEEEEEEETTEEE-EEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred cEEEEEEEEEEECCCCCEEEEEEEEECCCcE-EEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999988 999999999999999999999865 99999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+|+.||+.||+.|. .++++.| .+.+|.||+.|||+|+|++.|+..|+|||+|||.+.|.....+|+|++++++|
T Consensus 85 ~~~~dQ~~iD~~m~-~lDgT~n-----ks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinG 158 (441)
T 3qtp_A 85 KNVLNQAELDEMMI-KLDGTNN-----KGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVING 158 (441)
T ss_dssp CBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEEC
T ss_pred CChhhHHHHHHHHH-hccCCCC-----ccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecC
Confidence 99999999999999 8999998 68999999999999999999999999999999877777777899999999999
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhC
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAG 241 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g 241 (445)
|.|+++++++||||++|.++.+++|+++++.++|+++|+.||.|+|...+.+|++|+|.|++++.++.|+.+.+|++++|
T Consensus 159 G~ha~n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aG 238 (441)
T 3qtp_A 159 GAHAGNALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAG 238 (441)
T ss_dssp GGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHT
T ss_pred CccCCCccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CCCCeEEEEeccccccccCCc-eeeecccCC--CCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHH
Q 043137 242 YTGKVVIGMDVAASEFYGSDK-TYDLNFKEE--NNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSE 318 (445)
Q Consensus 242 ~~~~i~l~vD~~a~~~~~~~~-~y~~~~~~~--~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
|+++|.|++|+++++||++++ +|+++|++| +.+.+..+|++|++++|.+++++|+|.||||||+++|+++|++|+++
T Consensus 239 y~~~i~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~ 318 (441)
T 3qtp_A 239 YTGKIEIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVE 318 (441)
T ss_dssp CTTTCEEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHH
T ss_pred CCceEEEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHh
Confidence 987999999999999998633 899998776 34445678999999999999999999999999999999999999999
Q ss_pred hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhh
Q 043137 319 VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 319 ~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++ ++||+|||++++++++++++++.+++|+++||++|+||||++++++++|+++|+.+|++|+++||++++++|||||+
T Consensus 319 lg-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgETeDt~iAdLAVal 397 (441)
T 3qtp_A 319 HG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGL 397 (441)
T ss_dssp TT-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHT
T ss_pred cC-CceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEeCCCCCccHhHHHHHHHHh
Confidence 96 69999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCchhHHHHHHHHHHHHHhCccccccccccCCCC
Q 043137 399 ATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 442 (445)
Q Consensus 399 ~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
+++|+|.|.|+|+||++||||||||||||++ +.|.+.+||+|.
T Consensus 398 ~~gqIKtGap~rseR~aKyNqLlrIeeelg~-a~~~g~~~~~~~ 440 (441)
T 3qtp_A 398 NCKQIKTGAPCRSERLCKYNQLMRIEEELGN-IPYAGKNWRNST 440 (441)
T ss_dssp TCEEEECCCSCSHHHHHHHHHHHHHHHHHSS-CCBCTTCCBCCC
T ss_pred CCCccccCCCcchhHHHHHHHHHHHHHHhCc-CeecccccccCC
Confidence 9999999999999999999999999999999 999999999996
No 3
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=4e-93 Score=724.95 Aligned_cols=417 Identities=50% Similarity=0.811 Sum_probs=386.0
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhh
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL 79 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~L 79 (445)
|..+|++|++|+|+||+|+|||+|+|+|++|++|+|++|+++|||.+|+.+++|+++. |.|+++.++++.|++.|+|.|
T Consensus 1 ~~~~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~L 80 (428)
T 3tqp_A 1 MTATITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDAL 80 (428)
T ss_dssp -CCCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHH
T ss_pred CCceEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHh
Confidence 6669999999999999999999999999999999999999999999999999998864 999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccC-CCcceeeeeeEEe
Q 043137 80 AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG-NKNLVLPVPAFNV 158 (445)
Q Consensus 80 iG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G-~~~~~vp~~~~~~ 158 (445)
+|+||.+|++||+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+||| | ..+.++|+|+|++
T Consensus 81 iG~d~~~~~~i~~~m~-~~dgt~~-----k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~~~pvp~~~~ 151 (428)
T 3tqp_A 81 LGQDPRSQEEIDRIMI-ELDGTEN-----KANLGANAILGVSLAVAYAAANNADLPLYRYLG---GDGGPFSMPVPMMNI 151 (428)
T ss_dssp TTCCTTCHHHHHHHHH-HHHCCTT-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---TTTCCCCBCEEEEEE
T ss_pred cCCCccCHHHHHHHHH-HhcCcCC-----cCccchhHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeeeEEEEE
Confidence 9999999999999999 7887765 578889999999999999999999999999999 9 6556799999999
Q ss_pred ecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHH
Q 043137 159 INGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIA 238 (445)
Q Consensus 159 ~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~ 238 (445)
++||.|+++++++||+|++|.++.+++++++++.++|+++|.+++.| |. .+.+|++|+|.|++++++++|+.+.+|+|
T Consensus 152 inGG~ha~~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air 229 (428)
T 3tqp_A 152 INGGAHATNNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-GL-MSAVGDEGGFAPDLPNNEAAFELILEAIE 229 (428)
T ss_dssp EECC----CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHH
T ss_pred ecCcccCCCccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-cc-ccccCCCCCcCCCcccHHHHHHHHHHHHH
Confidence 99999988889999999999999999999999999999999988877 53 67899999999999888999999889999
Q ss_pred HhCCC-C-CeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHH
Q 043137 239 KAGYT-G-KVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLT 316 (445)
Q Consensus 239 ~~g~~-~-~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~ 316 (445)
++||+ + ++.|++|+|++++|+++ +|+++ |+.||++++++++.+++++|++.|||||++++|+++|++|+
T Consensus 230 ~agy~~G~dv~l~vD~aase~~~~g-~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~ 300 (428)
T 3tqp_A 230 DANYVPGKDIYLALDAASSELYQNG-RYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLT 300 (428)
T ss_dssp HTTCCBTTTBEEEEECCGGGSEETT-EECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHH
T ss_pred HhhcccCCceEEEEecchhhhccCC-ceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHH
Confidence 99886 4 89999999999999888 89874 68999999999988889999999999999999999999999
Q ss_pred HHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHh
Q 043137 317 SEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSV 396 (445)
Q Consensus 317 ~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~ 396 (445)
++++.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++||||
T Consensus 301 ~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~iadLaV 380 (428)
T 3tqp_A 301 ERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIADLAV 380 (428)
T ss_dssp HHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHH
T ss_pred HhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHH
Confidence 99987788999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCccccCCCCCchhHHHHHHHHHHHHHhCccccccccc
Q 043137 397 GLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 437 (445)
Q Consensus 397 a~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~ 437 (445)
|+++.|+|.|+|+|+||++||||||||||||++.++|.+.+
T Consensus 381 a~~~~~ik~G~p~r~er~akyn~llriee~l~~~~~~~~~~ 421 (428)
T 3tqp_A 381 ATDARQIKTGSLCRSDRVAKYNRLLQIERELNDQAPYAGKE 421 (428)
T ss_dssp HTTCEEEECCCSSSHHHHHHHHHHHHHHHHHTTSSCBCGGG
T ss_pred HcCCCcccCCCCcchhHHHHHhHHHHHHHHhCcccEecCcc
Confidence 99999999999999999999999999999999999998753
No 4
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=8.2e-93 Score=725.97 Aligned_cols=419 Identities=53% Similarity=0.848 Sum_probs=389.0
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhhc
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALA 80 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~Li 80 (445)
.|+|++|++|+|+||+|+|||+|+|+|++|++|+|++|+++|||.+|+.+++|+++. |.|+++.++++.|++.|+|.|+
T Consensus 25 ~m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~Li 104 (449)
T 3uj2_A 25 YLEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILS 104 (449)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT
T ss_pred ceEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHc
Confidence 489999999999999999999999999999999999999999999999999998874 9999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeec
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVIN 160 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~ 160 (445)
|+||.+|++||+.|. .++++.+ ++.++.+|++||||||||++||.+|+|||+||| |..+.++|+|+|++++
T Consensus 105 G~d~~~~e~i~~~m~-~~dgt~~-----k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~lpvp~~n~in 175 (449)
T 3uj2_A 105 GMDASDIYAVDRAMI-DADGTKD-----KSKFGANAVLAVSIACAKAAAAALGVPLYRFLG---GLNANRLPVPMMNILN 175 (449)
T ss_dssp TSBTTCHHHHHHHHH-HHHCSSS-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---GGGCCBCCEECEEEEE
T ss_pred cCCccCHHHHHHHHH-HhcCcCC-----cchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhC---CCCCCceeeeeEEEec
Confidence 999999999999999 7877755 678889999999999999999999999999999 9887899999999999
Q ss_pred CcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHh
Q 043137 161 GGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKA 240 (445)
Q Consensus 161 gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~ 240 (445)
||.|+++++++||+|++|.++.+++++++++.++|+++|..+|.| | ..+++|++|+|.|+++++++.++.+++|+|++
T Consensus 176 GG~ha~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g-~~t~vGdeggfap~~~~~~e~l~~i~~AIr~a 253 (449)
T 3uj2_A 176 GGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-G-LATSVGDEGGFAPDLASDEEAIEYILEAVKLA 253 (449)
T ss_dssp CSTTSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSCHHHHHHHHHHHHHHT
T ss_pred CcccCCCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-C-CccccCCCCCcCCCccCHHHHHHHHHHHHHHh
Confidence 999988889999999999999999999999999999999888877 5 56789999999999988999999999999999
Q ss_pred CCC-C-CeEEEEeccccccccCCc-eeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHH
Q 043137 241 GYT-G-KVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTS 317 (445)
Q Consensus 241 g~~-~-~i~l~vD~~a~~~~~~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~ 317 (445)
||+ + ++.|++|+|++++|++++ +|++. +.++.||++++++++.+++++|++.|||||++++|+++|++|++
T Consensus 254 gy~~G~dv~l~vD~aase~~~~~~g~Y~l~------~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~ 327 (449)
T 3uj2_A 254 GYEPGRDFVLAMDAASSEWKGEKKGEYILP------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTR 327 (449)
T ss_dssp TCCBTTTBEEEEECCGGGCBCSSTTEEECT------TTCCEEEHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHH
T ss_pred ccccCCceEEEEEcchhhhccccCceeecc------CcccccCHHHHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHH
Confidence 886 4 899999999999998533 78874 12357899999999888899999999999999999999999999
Q ss_pred HhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhh
Q 043137 318 EVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVG 397 (445)
Q Consensus 318 ~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a 397 (445)
+++.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||||
T Consensus 328 ~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~iadLaVa 407 (449)
T 3uj2_A 328 ELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVA 407 (449)
T ss_dssp HHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHH
T ss_pred HhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHH
Confidence 99555999999998778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccCCCCCchhHHHHHHHHHHHHHhCccccccccc
Q 043137 398 LATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 437 (445)
Q Consensus 398 ~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~ 437 (445)
++++|+|.|+|+|+||++||||||||||||++.++|.+..
T Consensus 408 ~~~~~ik~G~~~r~er~akyn~llriee~l~~~~~~~~~~ 447 (449)
T 3uj2_A 408 LNTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAVYPGFT 447 (449)
T ss_dssp TTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGCBCCGGG
T ss_pred hCCCcccCCCCchhhHHHHHHHHHHHHHHhccccEeCCcc
Confidence 9999999999999999999999999999999999998753
No 5
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=1.2e-92 Score=719.33 Aligned_cols=406 Identities=49% Similarity=0.779 Sum_probs=385.3
Q ss_pred EEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCC
Q 043137 4 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKD 83 (445)
Q Consensus 4 kI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d 83 (445)
+|++|++|+|+||+|+|||+|+|+|++|++|++++|+|+|||.+|+.+++|+++.|.|+++.++++.|++.|+|.|+|+|
T Consensus 6 ~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~~~y~gkgv~~av~~v~~~iap~LiG~d 85 (417)
T 3qn3_A 6 VIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDERFGGKGVLKAVANVNETIADEILGLD 85 (417)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCSTGGGGTCCHHHHHHHHTHHHHHHTTSB
T ss_pred eeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCCccccCccHHHHHHHHHHHHHHHHCCCC
Confidence 79999999999999999999999999999999999999999999999999999779999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcc
Q 043137 84 PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGS 163 (445)
Q Consensus 84 ~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~ 163 (445)
|.+|++||+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+||| |..+.++|+|++++++||.
T Consensus 86 ~~~~~~id~~m~-~~dgt~~-----k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG---G~~~~~lPv~~~nvinGG~ 156 (417)
T 3qn3_A 86 AFNQTQLDDTLR-ELDGTNN-----YSNLGANATLGVSMATARAAAAALGMPLYRYLG---GANASILPVPMCNIINGGA 156 (417)
T ss_dssp TTCHHHHHHHHH-HHHCSSS-----CTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---GGGCCEECEEEEEEEECGG
T ss_pred ccCHHHHHHHHH-HhhccCC-----CCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCcceeeeeeeeecCcc
Confidence 999999999999 7887755 678899999999999999999999999999999 9878899999999999999
Q ss_pred cCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCC
Q 043137 164 HAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYT 243 (445)
Q Consensus 164 ~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~ 243 (445)
|+++++++||+|++|.+..+++++++++.++|+++|..++.| |. .+++|++|+|.|++++.++.++.+++|+|++||+
T Consensus 157 ha~~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~ 234 (417)
T 3qn3_A 157 HANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYE 234 (417)
T ss_dssp GSSSSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCT
T ss_pred cCCCcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCC
Confidence 998888999999999999999999999999999999988877 54 6789999999999888888999998999999987
Q ss_pred CCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCc
Q 043137 244 GKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKV 323 (445)
Q Consensus 244 ~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~v 323 (445)
+++.|++|+|++++|+++ +|+++ ++.||++++++++.+++++|++.||||||+++|+++|++|+++++.++
T Consensus 235 ~dv~l~vD~~ase~~~~g-~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~i 305 (417)
T 3qn3_A 235 NRVKIALDVASTEFFKDG-KYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKI 305 (417)
T ss_dssp TTEEEEEECCGGGGEETT-EEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTS
T ss_pred CCceEEEECCchhhccCC-eeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCC
Confidence 799999999999999887 79974 467899999999888899999999999999999999999999995559
Q ss_pred eEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcc
Q 043137 324 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 324 pI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+.+|++|+++||++++++|||||++++|+
T Consensus 306 pI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~iadlava~~~~~i 385 (417)
T 3qn3_A 306 QLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQI 385 (417)
T ss_dssp EEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCSEE
T ss_pred ceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhCCCcc
Confidence 99999998878999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHhCc
Q 043137 404 KTGAPCRSERLAKYNQLLRIEEELGA 429 (445)
Q Consensus 404 ~~G~~~~~e~~~k~n~ll~i~~~l~~ 429 (445)
|.|+|+|+||++||||||||||||++
T Consensus 386 k~G~~~r~er~akyn~llriee~l~~ 411 (417)
T 3qn3_A 386 KTGALARGERTAKYNRLLEIEFESDE 411 (417)
T ss_dssp ECCCSCSHHHHHHHHHHHHHTTTCCE
T ss_pred ccCCCcchhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999975
No 6
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=1.5e-90 Score=709.61 Aligned_cols=429 Identities=61% Similarity=0.961 Sum_probs=403.0
Q ss_pred EEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhhc--
Q 043137 4 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALA-- 80 (445)
Q Consensus 4 kI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~Li-- 80 (445)
.|++|++++|+||+|+|+|+|+|+|++| +|+|++|++++||.+|+.+++|+++. |.|+++.++++.|++.|+|.|+
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHC
Confidence 3899999999999999999999999999 99999999999999999999998765 9999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC--cceeeeeeEEe
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFNV 158 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~--~~~vp~~~~~~ 158 (445)
|+||.+|+.||+.|. .++++.+ .+.++.+|++||||||||+.||.+|+|||+|||++.|.. ++++|+|++++
T Consensus 80 G~d~~~~~~i~~~m~-~~dgt~~-----~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~ 153 (436)
T 2al1_A 80 NIDVKDQKAVDDFLI-SLDGTAN-----KSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNV 153 (436)
T ss_dssp TCCTTCHHHHHHHHH-HHHCSTT-----STTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEE
T ss_pred CCChhhHHHHHHHHH-HhcCCcc-----cchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEe
Confidence 999999999999999 7777665 467889999999999999999999999999999777866 67899999999
Q ss_pred ecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHH
Q 043137 159 INGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIA 238 (445)
Q Consensus 159 ~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~ 238 (445)
++||.|+.+++++||+|++|.++.+++++++++.++|+++|..+|.|+|...+++|++|+|.|+++.+++.++.++++++
T Consensus 154 inGg~ha~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~ 233 (436)
T 2al1_A 154 LNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK 233 (436)
T ss_dssp EECGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHH
T ss_pred ecCccccCCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHH
Confidence 99999998889999999999999999999999999999999999989887667899999999999889999999999999
Q ss_pred HhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHH
Q 043137 239 KAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSE 318 (445)
Q Consensus 239 ~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
++|+++++.|++|+|++++|+++ +|+++|+++..+.|+.||++|+++++.+++++|+|.||||||+++|+++|++|+++
T Consensus 234 ~~G~~g~v~l~vD~aase~~~n~-~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~ 312 (436)
T 2al1_A 234 AAGHDGKVKIGLDCASSEFFKDG-KYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKT 312 (436)
T ss_dssp HHTCTTTCEEEEECCGGGGEETT-EECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTT
T ss_pred HcCCCcceEEEEechhhhhccCC-ceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhc
Confidence 99975479999999999999877 89887766655668999999999999999999999999999999999999999999
Q ss_pred hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhh
Q 043137 319 VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 319 ~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
++ +||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+.+|++|+++||++++++|||+|+
T Consensus 313 ~~--ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~ 390 (436)
T 2al1_A 313 AG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGL 390 (436)
T ss_dssp CC--SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHT
T ss_pred CC--CeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHh
Confidence 77 9999999977889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCchhHHHHHHHHHHHHHhCccccccccccCCCC
Q 043137 399 ATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 442 (445)
Q Consensus 399 ~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
.++|+|.|.|+|+||++||||||||||+|++.+.|.+.+|++|.
T Consensus 391 ~~~~ik~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 434 (436)
T 2al1_A 391 RTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHGD 434 (436)
T ss_dssp TCSEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGCTTGG
T ss_pred cCCcCcCCCCccchHHHHHHHHHHHHHHhccccEeCccccCCCC
Confidence 99999999999999999999999999999999999999999985
No 7
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=8.3e-90 Score=704.75 Aligned_cols=428 Identities=71% Similarity=1.123 Sum_probs=401.3
Q ss_pred EEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCC-CCCCccHHHHHHHHHHhHhhhhc--
Q 043137 4 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGS-DYLGKGVSKAVSNVNAIIGPALA-- 80 (445)
Q Consensus 4 kI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~-~y~~~~~~~a~~~i~~~l~p~Li-- 80 (445)
.|++|++++|+||+|+|+|+|+|+||+|+ |||++|+++|||.+|+.+++|+++ .|.|+++.++++.|++.|+|.|+
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~-G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGL-FRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISS 79 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEE-EEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCc-eEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhC
Confidence 48999999999999999999999999999 999999999999999999999765 59999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeec
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVIN 160 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~ 160 (445)
|+||.+++.||+.|. .++++.+ .+.++.+|++||||||||+.||.+|+|||+|||.++|..+.++|+|++++++
T Consensus 80 G~d~~~~~~i~~~m~-~~dgt~~-----~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~in 153 (439)
T 2akz_A 80 GLSVVEQEKLDNLML-ELDGTEN-----KSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVIN 153 (439)
T ss_dssp CCCTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEE
T ss_pred CCChhhHHHHHHHHH-HhcCCcc-----cchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEec
Confidence 999999999999999 7777765 4678899999999999999999999999999998888777789999999999
Q ss_pred CcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHh
Q 043137 161 GGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKA 240 (445)
Q Consensus 161 gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~ 240 (445)
||.|+.+++++||+|++|.++.+++++++++.++|+++|..+|.|+|...+++|++|+|.|+++.+.+.++.++++++++
T Consensus 154 Gg~ha~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~ 233 (439)
T 2akz_A 154 GGSHAGNKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKA 233 (439)
T ss_dssp CGGGSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHH
T ss_pred CccccccccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHc
Confidence 99999888999999999999999999999999999999999999988766789999999999888999999999999989
Q ss_pred CCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhC
Q 043137 241 GYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVG 320 (445)
Q Consensus 241 g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~ 320 (445)
|+++++.|++|+|++++|+++ +|++++..| .+.|+.||++++++++.+++++|+|.|||||++++|+++|++|+++++
T Consensus 234 G~~g~v~l~vD~a~se~~~~g-~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ 311 (439)
T 2akz_A 234 GYTEKIVIGMDVAASEFYRDG-KYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVG 311 (439)
T ss_dssp TCTTTCEEEEECCGGGGEETT-EECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCS
T ss_pred CCccceEEEEechHhhhccCC-eeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCC
Confidence 975479999999999999877 788765444 345788999999999999999999999999999999999999999977
Q ss_pred CCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcC
Q 043137 321 EKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLAT 400 (445)
Q Consensus 321 ~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~ 400 (445)
+||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+.+|++|+++||++++++|||+|+.+
T Consensus 312 --ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~ 389 (439)
T 2akz_A 312 --IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCT 389 (439)
T ss_dssp --SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTC
T ss_pred --CEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcC
Confidence 999999987788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHHhCccccccccccCCCC
Q 043137 401 GQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 442 (445)
Q Consensus 401 ~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~~~ 442 (445)
+|+|.|.|+|+||++||||||||||+|++++.|.+.+||+|.
T Consensus 390 ~~ik~G~~~r~er~~kyn~llriee~l~~~~~~~~~~~~~~~ 431 (439)
T 2akz_A 390 GQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNPS 431 (439)
T ss_dssp SEEECCCSCSHHHHHHHHHHHHHHHHHGGGCCBCGGGTTCGG
T ss_pred CcccCCCCccchhHHHHHHHHHHHHHhccCcEecCccCCCcc
Confidence 999999999999999999999999999999999999999984
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=1.3e-84 Score=667.27 Aligned_cols=426 Identities=59% Similarity=0.941 Sum_probs=388.4
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCC-CCCCccHHHHHHHHHHhHhhhhcC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGS-DYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~-~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
|||++|++++|.++.++|+|+|+|+|++| +|||++|++++||.+|+.+++|+++ .|.|+++..+++.|++.|+|.|+|
T Consensus 4 m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~LiG 82 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALIG 82 (432)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHCC
Confidence 79999999999999999999999999999 9999999999999999999999875 499999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++.||+.|. .++++.+ ++.++.+|++||||||||+.||.+|+|||+|||.++|..+.++|+|+|++++|
T Consensus 83 ~d~~~~~~i~~~m~-~~~~~~~-----~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~g 156 (432)
T 2ptz_A 83 RDELKQEELDTLML-RLDGTPN-----KGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVING 156 (432)
T ss_dssp CCTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEEC
T ss_pred CChhhHHHHHHHHH-HhhCCCC-----cchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEecC
Confidence 99999999999998 6776654 46788899999999999999999999999999988887666799999999999
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhC
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAG 241 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g 241 (445)
|.|+.+.++++|+|++|.++.++++++++..++|+++|..++.|+|...+.++++|+|.|+++..++.++.+.+++|++|
T Consensus 157 g~~a~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G 236 (432)
T 2ptz_A 157 GKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAG 236 (432)
T ss_dssp STTSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTT
T ss_pred cccccCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhC
Confidence 98877778899999999999999999999999999999888888886657899999999988777788887778999888
Q ss_pred CCCCeEEEEeccccccccCCc-eeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhC
Q 043137 242 YTGKVVIGMDVAASEFYGSDK-TYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVG 320 (445)
Q Consensus 242 ~~~~i~l~vD~~a~~~~~~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~ 320 (445)
+++++.|++|+|++++|+..+ +|++.+..+ .++.|++.++++++.+++++|++.|||||++++|+++|++|+++++
T Consensus 237 ~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~---~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g 313 (432)
T 2ptz_A 237 HRGKFAICMDCAASETYDEKKQQYNLTFKSP---EPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALK 313 (432)
T ss_dssp CTTSCEEEEECCGGGGEETTTTEEETTTTSS---SCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTT
T ss_pred CcCCcEEEEECcccccccccCceeEeecccc---ccCCCCHHHHHHHHHHHHHhCCceEEECCCCcchHHHHHHHHHhcC
Confidence 544799999999999887522 687632100 0356899999999989999999999999999999999999999994
Q ss_pred CCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcC
Q 043137 321 EKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLAT 400 (445)
Q Consensus 321 ~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~ 400 (445)
.++||+|||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||++++++|||+|+++
T Consensus 314 ~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~a~lava~~~ 393 (432)
T 2ptz_A 314 GKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGS 393 (432)
T ss_dssp TTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTC
T ss_pred CCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHHHHHHHHhCC
Confidence 44999999987789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHHhCcccccccccc
Q 043137 401 GQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKF 438 (445)
Q Consensus 401 ~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~ 438 (445)
+|+|.|.|+++||++|||||||||++|++.+.|.++.|
T Consensus 394 ~~ik~G~~~r~er~~kyn~llrie~~l~~~~~~~~~~~ 431 (432)
T 2ptz_A 394 GQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFGFPGW 431 (432)
T ss_dssp SEEECCSSCSHHHHHHHHHHHHHHHHHCTTCEESCGGG
T ss_pred CCCCCCCCccchhHHHHHHHHHHHHHhccCcCccCCCC
Confidence 99999999999999999999999999999999999877
No 9
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.4e-81 Score=643.30 Aligned_cols=419 Identities=58% Similarity=0.908 Sum_probs=387.7
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
.|||++|+++.+.++.++++++|+|+||+|++|+|++|++.+||.+|+.+++|+++.|.++++.+++..|++.|+|.|+|
T Consensus 8 ~MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~~~~g~~~~~~~~~i~~~l~p~LiG 87 (427)
T 2pa6_A 8 RFEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKRFGGKGVLMAVENVNSIIRPEILG 87 (427)
T ss_dssp GGBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSSGGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCccccccccHHHHHHHHHHHHHHHHcC
Confidence 48999999999999989999999999999999999999999999999999999988899999999999999899999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++.+|+.|. .++++.+ ++.++.+|++|||+||||+.||.+|+|||+||| |..++++|+|++++++|
T Consensus 88 ~d~~~~~~i~~~l~-~~~~~~~-----~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLG---g~~~~~vp~~~~~~~~g 158 (427)
T 2pa6_A 88 YDARMQREIDTIMI-ELDGTPN-----KSRLGANAILAVSLAVAKAAAATAKIPLYKYLG---GFNSYVMPVPMMNVING 158 (427)
T ss_dssp CBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---CSCCCEECEECEEEEEC
T ss_pred CCHHHHHHHHHHHH-HhhCCCc-----cccchHHHHHHHHHHHHHHHHHHhCCcHHHHhc---Cccccccccchhccccc
Confidence 99999999999998 5655543 345677999999999999999999999999999 97777899999888888
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhC
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAG 241 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g 241 (445)
|.|+++.++++++|+.|.++..++++.+...++|+++|..+|.|+|....+++++|++.|+++.+.++++++|++++++|
T Consensus 159 g~~~~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G 238 (427)
T 2pa6_A 159 GKHAGNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAG 238 (427)
T ss_dssp STTTSSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHT
T ss_pred cccccCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhC
Confidence 88877778899999999888899999999999999999888888887667888999998888888999999999999888
Q ss_pred CCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCC
Q 043137 242 YTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGE 321 (445)
Q Consensus 242 ~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~ 321 (445)
+++++.|++|+|++++|+|+ +|+++ |+.||++++++++.+++++|++.|||||++++|+++|++|+++++
T Consensus 239 ~~~~~~L~vDa~as~~~~n~-~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~- 308 (427)
T 2pa6_A 239 YEDEVVFALDAAASEFYKDG-YYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELD- 308 (427)
T ss_dssp CTTTCEEEEECCGGGGEETT-EEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSS-
T ss_pred CCCCcEEEEEcchhccccCC-ceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCC-
Confidence 43379999999999999877 78874 788999999999877899999999999999999999999999988
Q ss_pred CceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCC
Q 043137 322 KVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATG 401 (445)
Q Consensus 322 ~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~ 401 (445)
+||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|++++++|+++||.+++++|||++..++
T Consensus 309 -ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~ 387 (427)
T 2pa6_A 309 -IQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSG 387 (427)
T ss_dssp -SEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCS
T ss_pred -CeEEeCccccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCC
Confidence 9999999877889999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHhCccccccccccCCC
Q 043137 402 QIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 441 (445)
Q Consensus 402 ~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~~~~~~~ 441 (445)
+++.|.|+++||++|||||||||++|++ +.|.+.+|+.|
T Consensus 388 ~~~~G~~~~~er~~kyn~llri~~~~~~-~~~~~~~~~~~ 426 (427)
T 2pa6_A 388 QIKTGAPARGERTAKYNQLIRIEQELGL-SKYAGRNFRCP 426 (427)
T ss_dssp EEECCSSCSHHHHHHHHHHHHHHHHSSS-CEECGGGCSCC
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHhcc-cccccccccCC
Confidence 9999999999999999999999999999 99999889887
No 10
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=6.8e-81 Score=641.13 Aligned_cols=422 Identities=53% Similarity=0.836 Sum_probs=385.0
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCC-CCCCccHHHHHHHHHHhHhhhhcC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGS-DYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~-~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
|||++|+++.|++++|+++|+|+|+||+|++|.+++|++.++|.+|+.+++|+++ +|.|+++.++++.|++.|+|.|+|
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~LiG 80 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIG 80 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHcC
Confidence 7999999999999999999999999999999944788889999999999999775 499999999999999889999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce----eeeeeEE
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV----LPVPAFN 157 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~----vp~~~~~ 157 (445)
+||.+++.||+.|. .++++++ .+.++.+|++||||||||+.||.+|+|||+||| |..+.. +|+|+|+
T Consensus 81 ~d~~~~~~i~~~l~-~~~g~~~-----~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~~~~~~pv~~~~ 151 (431)
T 2fym_A 81 KDAKDQAGIDKIMI-DLDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIA---ELNGTPGKYSMPVPMMN 151 (431)
T ss_dssp SBTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHH---HHTTCTTCCCCCEECEE
T ss_pred CCHHHHHHHHHHHH-HhhCCCc-----ccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhc---CcccccccccccceeEe
Confidence 99999999999999 6776654 466788999999999999999999999999999 865555 9999999
Q ss_pred eecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHH
Q 043137 158 VINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAI 237 (445)
Q Consensus 158 ~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av 237 (445)
+++||.|+++.++++++|++|.++..++++++...++|+++|..++.+ |. ..++|++|+|.|+++.+.++++++|+++
T Consensus 152 ~~~gg~~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~-~~kvG~~gg~~~~~~~d~~~l~~vreai 229 (431)
T 2fym_A 152 IINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAV 229 (431)
T ss_dssp EEECGGGSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHH
T ss_pred eccCccccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Cc-ccccCcccCCCCCccchHHHHHHHHHHH
Confidence 999999887778899999999888899999999999999999888866 53 2678889999999999999999999999
Q ss_pred HHhCCC-C-CeEEEEeccccccccCCceeeecccCCCCCCC-CccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHH
Q 043137 238 AKAGYT-G-KVVIGMDVAASEFYGSDKTYDLNFKEENNDGS-QKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAK 314 (445)
Q Consensus 238 ~~~g~~-~-~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~-~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
+++|++ + ++.|++|++++++|+++ +|++.. .| +.||.+++++++.++.++|++.|||||++++|+++|++
T Consensus 230 ~~~g~~~G~dv~l~vDaaas~~~~~~-~Y~~~~------~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~ 302 (431)
T 2fym_A 230 KAAGYELGKDITLAMDCAASEFYKDG-KYVLAG------EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAY 302 (431)
T ss_dssp HHTTCCBTTTBEEEEECCGGGGEETT-EEEEGG------GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHH
T ss_pred HHhccCCCCccEEEEeechhhccccC-ceeecc------CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCcccHHHHHH
Confidence 999987 4 79999999999999877 798752 26 88999999999776544599999999999999999999
Q ss_pred HHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHH
Q 043137 315 LTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADL 394 (445)
Q Consensus 315 L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~l 394 (445)
|+++++.++||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|+++|++|+++||.+++++||
T Consensus 303 l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~l 382 (431)
T 2fym_A 303 QTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADL 382 (431)
T ss_dssp HHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHH
T ss_pred HHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHHH
Confidence 99999334999999944688999999999999999999999999999999999999999999999999889999999999
Q ss_pred HhhhcCCccccCCCCCchhHHHHHHHHHHHHHhCccccccc-cccCCCC
Q 043137 395 SVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFRAPV 442 (445)
Q Consensus 395 a~a~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~-~~~~~~~ 442 (445)
|+++.+++++.|.|+++||++|||||||||++|++++.|.+ .+|+.|.
T Consensus 383 a~a~~~~~i~~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~~ 431 (431)
T 2fym_A 383 AVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA 431 (431)
T ss_dssp HHHTTCEEEECCCSCSHHHHHHHHHHHHHHHHHGGGSCCCGGGGSTTCC
T ss_pred HHhcCCCccccCCCccchHHHHHHHHHHHHHHhccCceecChhhccCCC
Confidence 99999999999999999999999999999999999999998 7899873
No 11
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=1.1e-79 Score=633.55 Aligned_cols=418 Identities=52% Similarity=0.836 Sum_probs=377.3
Q ss_pred EEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCC-CCCccHHHHHHHHHHhHhhhhcCC
Q 043137 4 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK 82 (445)
Q Consensus 4 kI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~-y~~~~~~~a~~~i~~~l~p~LiG~ 82 (445)
.|++|++|+|+||+|+++|+|+|+||+|++|.+++|++.+||.+|+.+++|+++. |.|+++..++..|++.|+|.|+|+
T Consensus 13 ~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~LiG~ 92 (444)
T 1w6t_A 13 IITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGY 92 (444)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTTS
T ss_pred hcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHcCC
Confidence 7999999999999999999999999999999447788899999999999998764 899999999999998999999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCc
Q 043137 83 DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGG 162 (445)
Q Consensus 83 d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 162 (445)
||.+++.||+.|. .++++.+ .+.++.+|++||||||||+.||.+|+|||+||| |..++++|+|++++++||
T Consensus 93 d~~~~~~i~~~l~-~~~g~~~-----~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~vp~~~~~~~~gg 163 (444)
T 1w6t_A 93 DVRDQQAIDRAMI-ALDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSYLG---GFNTKVLPTPMMNIINGG 163 (444)
T ss_dssp BTTCHHHHHHHHH-HHHCSTT-----CTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---CTTCCEECEECEEEEECG
T ss_pred CHHHHHHHHHHHH-HhhCCCc-----cccchhHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCcccccccccceeccc
Confidence 9999999999998 6766654 456778999999999999999999999999999 977788999998888898
Q ss_pred ccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCC
Q 043137 163 SHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGY 242 (445)
Q Consensus 163 ~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~ 242 (445)
.++++.+++||+|++|.++..++++++...++|+++|..+|.| |. ..++|++|+|.++++.+.++++++|++++++||
T Consensus 164 ~~a~~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~agy 241 (444)
T 1w6t_A 164 SHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGY 241 (444)
T ss_dssp GGCSSSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTC
T ss_pred cccccccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHhcc
Confidence 8877778999999999888899999999999999999888877 53 377888999999998899999999999999988
Q ss_pred CC--CeEEEEecccccccc--CCceeeecccCCCCCCCCc-----cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHH
Q 043137 243 TG--KVVIGMDVAASEFYG--SDKTYDLNFKEENNDGSQK-----ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 243 ~~--~i~l~vD~~a~~~~~--~~~~y~~~~~~~~~~~~~~-----~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~ 313 (445)
.+ ++.|++|++++++|+ ++ +|+++ + |+. ||++++++++.++.++|++.|||||++++|+++|+
T Consensus 242 ~pG~dv~L~vDaaas~~~~~~n~-~y~~~-~------n~~~~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~ 313 (444)
T 1w6t_A 242 VPGKDVFLGFDCASSEFYDKERK-VYDYT-K------FEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWK 313 (444)
T ss_dssp CBTTTBEEEEECCGGGGBC--CC-CEETH-H------HHCTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHH
T ss_pred CCCCCcEEEEEccchhcccccCC-ceeec-c------ccCcccCCCCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHHH
Confidence 63 799999999999996 45 67652 1 234 89999999987766679999999999999999999
Q ss_pred HHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHH
Q 043137 314 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIAD 393 (445)
Q Consensus 314 ~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~ 393 (445)
+|+++++.++||++||++++++++++++++.+++|++|||++|+||||++++++++|+++|++++++|+++||.+++++|
T Consensus 314 ~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a~ 393 (444)
T 1w6t_A 314 ALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIAD 393 (444)
T ss_dssp HHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHH
T ss_pred HHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHH
Confidence 99999933399999998568899999999999999999999999999999999999999999999999888999999999
Q ss_pred HHhhhcCCccccCCCCCchhHHHHHHHHHHHHHhCccccccc-cccCC
Q 043137 394 LSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFRA 440 (445)
Q Consensus 394 la~a~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l~~~~~~~~-~~~~~ 440 (445)
||++++++++++|+|+++||++|||||||||++|+++..|.+ .+|++
T Consensus 394 lava~~~~~i~~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 441 (444)
T 1w6t_A 394 IAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLKSFYN 441 (444)
T ss_dssp HHHHTTCCEEECCCSSSHHHHHHHHHHHHHHHHHGGGCEECGGGGCTT
T ss_pred HHHhcCCCcccCCCCcccccHHHHHHHHHHHHHhccccccCChhhhcc
Confidence 999999999999999999999999999999999999999998 77865
No 12
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=1e-50 Score=416.36 Aligned_cols=312 Identities=18% Similarity=0.258 Sum_probs=233.1
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
+++||+|++..+... ..+.|+|||+||+|++|||++... |+ ..++...|++.|+|.|+|
T Consensus 25 ~~~It~v~~~~v~~~-~~~~vlV~v~Td~G~~G~GEa~~~-----------------~~---~~~~~~~i~~~lap~LiG 83 (421)
T 4hnl_A 25 PTIITDVKSFAIKPD-RHNLVVVKVETNKGISGLGCSTFQ-----------------FR---PLAVKTVVDEYLRPLLMG 83 (421)
T ss_dssp CCBEEEEEEEEECSS-SSCEEEEEEEETTSCCEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHTT
T ss_pred CceEEEEEEEEECCC-CceEEEEEEEECCCCEEEEeccCC-----------------CC---HHHHHHHHHHHHHHHHCC
Confidence 468999999888643 445789999999999999976431 21 244455688889999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++++|+.|. .. .. |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++.+ ..+
T Consensus 84 ~dp~~ie~i~~~~~-~~-~~-----~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v~~y~~--~~~ 151 (421)
T 4hnl_A 84 RDANEIEDIWQVMN-VN-SY-----WRNGPITNNAISGIDMALWDIKGQLADMPLYQLLG---GKARTAIPAYTH--AVA 151 (421)
T ss_dssp CBTTCHHHHHHHHH-HT-TS-----SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEEEEE--EEE
T ss_pred CChhhHHHHHHHHH-hh-cc-----ccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcC---CccCcccceecc--cCC
Confidence 99999999999997 32 11 22345667899999999999999999999999999 988888887543 211
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcc----cCCCCCCCC-------CccChHHHH
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATN----VGDEGGFAP-------NIQENKEGL 230 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~----~~~~g~~~~-------~~~~~~~~l 230 (445)
. + +++..+++.+...++|+++| .|.|..... ......+.. .++.+.+++
T Consensus 152 ~-------~---------~~~~~~~a~~~~~~G~~~~K----~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v 211 (421)
T 4hnl_A 152 D-------N---------LDDLYHEIDRFLAAGYRYIR----CQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMF 211 (421)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEEE----EEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHH
T ss_pred C-------C---------HHHHHHHHHHHHHhhHHHHh----hccccccCCchhccccccccccccccchhHHHHHHHHH
Confidence 1 1 12234555555556676654 455532110 000111110 012233344
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+++|++ +| +++.|++|+ |+.||.++++++ .+.+++|++.|||||++++|++
T Consensus 212 ~avR~a---~G--~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~ 262 (421)
T 4hnl_A 212 AAIKEK---YG--NQFQMLHDV-----------------------HERLHPNQAIQF-AKAAEPYQLFFLEDILPPDQSH 262 (421)
T ss_dssp HHHHHH---HT--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCGGGGG
T ss_pred HHHHHH---hC--CCceEeccc-----------------------cccCCHHHHHHH-HHHhhhhhhcccccCCcccchH
Confidence 444444 46 689999999 367899999997 5678999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC-Chhh
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE-TEDT 389 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e-t~~~ 389 (445)
+|++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++ |++.+ +.++
T Consensus 263 ~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~-h~~~~~s~i~ 338 (421)
T 4hnl_A 263 WLTQLRSQSA--TPIATGELF-NNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAW-HTPSDISPVG 338 (421)
T ss_dssp GHHHHHTTCC--CCEEECTTC-CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECC-CCCSSSCHHH
T ss_pred HHHHHHhcCC--CCeecCcce-ehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEE-eCCcchhHHH
Confidence 9999999998 999999985 66999999999999999999999999999999999999999999855 54554 5454
Q ss_pred --HHHHHHhhhc
Q 043137 390 --FIADLSVGLA 399 (445)
Q Consensus 390 --~~~~la~a~~ 399 (445)
+.+||++++.
T Consensus 339 ~aa~~hl~aa~~ 350 (421)
T 4hnl_A 339 LAVNTHLNIHLH 350 (421)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCC
Confidence 4556666554
No 13
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=2.9e-51 Score=419.38 Aligned_cols=331 Identities=18% Similarity=0.247 Sum_probs=239.9
Q ss_pred ceEEEEEEeCCCceEEEecc-CCCc-cccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHH
Q 043137 20 PTVEVDVTTSDGHVARAAVP-SGAS-TGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQ 97 (445)
Q Consensus 20 ~~v~V~v~td~G~~G~g~~~-~~~~-~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~ 97 (445)
.+++|+|+||+|++|||+++ .+.+ +|..|. .++..++...|++.++|.|+|+||.+++.+|+.|. .
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~-----------~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i~~~l~-~ 118 (413)
T 1kcz_A 51 ESISVLLVLEDGQVAHGDCAAVQYSGAGGRDP-----------LFLAKDFIPVIEKEIAPKLIGREITNFKPMAEEFD-K 118 (413)
T ss_dssp CEEEEEEEETTSCEEEEEECCCTTTTSTTSCS-----------CCCHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHH-H
T ss_pred cEEEEEEEECCCCEEEEEEccccccccCcccc-----------cccHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHH-h
Confidence 46899999999999999654 3211 221111 01345667778888999999999999999999996 4
Q ss_pred hccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC-----CcceeeeeeEEeecCcccCCCCcccc
Q 043137 98 LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN-----KNLVLPVPAFNVINGGSHAGNKLAMQ 172 (445)
Q Consensus 98 l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~-----~~~~vp~~~~~~~~gg~~~~~~~~~~ 172 (445)
.... ...++.+|++|||+||||+.||.+|+|||+||| |. .+. |+|+|+.. |+.. ..
T Consensus 119 ~~~~-------g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~~~~~--~vp~~~~~-g~~~----~~-- 179 (413)
T 1kcz_A 119 MTVN-------GNRLHTAIRYGITQAILDAVAKTRKVTMAEVIR---DEYNPGAEIN--AVPVFAQS-GDDR----YD-- 179 (413)
T ss_dssp CEET-------TEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---HHHSTTCCCC--CCCEECCC-TTCT----TH--
T ss_pred cccC-------CcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhc---ccccCcCccC--CeeeeEec-Cccc----cC--
Confidence 3210 123557899999999999999999999999999 63 334 44555432 1100 00
Q ss_pred eeeeccCChhcHHHHHHHHHHH-HHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH----HHHHHHHHHHH-hCCCCCe
Q 043137 173 EFMILPVGASCFKEAMKMGVEV-YHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE----GLELLNTAIAK-AGYTGKV 246 (445)
Q Consensus 173 e~~~~p~~~~~~~~a~~~~~~~-~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~----~l~~l~~av~~-~g~~~~i 246 (445)
.++..++++.+...++ |+++| .|+| ..+ ....+ .++.+ +++|+ +| +++
T Consensus 180 ------~~~~~~~~a~~~~~~G~~~~~K----iKvG-------~~~------~~~~~~~~~d~~~v-~avR~~~G--~~~ 233 (413)
T 1kcz_A 180 ------NVDKMIIKEADVLPHALINNVE----EKLG-------LKG------EKLLEYVKWLRDRI-IKLRVRED--YAP 233 (413)
T ss_dssp ------HHHHHHHTTCSEEEECCCCCCC----CCCC-------TTS------HHHHHHHHHHHHHH-HHHCSSTT--CCC
T ss_pred ------CHHHHHHHHHHHHHhcchhhee----eccC-------CCc------cchhhHHHHHHHHH-HHHHHhcC--CCc
Confidence 0111222222222223 43332 2322 110 00122 33444 34543 45 479
Q ss_pred EEEEecccc--ccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC--Cee-eEECCCC----cCCHHHHHHHHH
Q 043137 247 VIGMDVAAS--EFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY--PIV-SIEDPFD----QDDWEHYAKLTS 317 (445)
Q Consensus 247 ~l~vD~~a~--~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~--~i~-~iEdP~~----~~D~~~~~~L~~ 317 (445)
.|++|+|+. ++| .||.+++++++. .++++ ++. |||||++ ++|+++|++|++
T Consensus 234 ~l~vDaN~~~~~~~-------------------~~~~~~a~~~~~-~L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~ 293 (413)
T 1kcz_A 234 IFHIDVYGTIGAAF-------------------DVDIKAMADYIQ-TLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRA 293 (413)
T ss_dssp EEEEECTTHHHHHT-------------------TTCHHHHHHHHH-HHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHH
T ss_pred eEEEecCCCccccc-------------------CCCHHHHHHHHH-HHHhhcCCcceEEecCCCCCCCcccHHHHHHHHH
Confidence 999999532 111 178899999865 46777 666 9999995 569999999999
Q ss_pred H-----hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH
Q 043137 318 E-----VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIA 392 (445)
Q Consensus 318 ~-----~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~ 392 (445)
+ ++ +||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++|++.||.+++++
T Consensus 294 ~l~~~g~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~~~~es~i~~~a 370 (413)
T 1kcz_A 294 ELDGRGVD--AELVADEW-CNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEV 370 (413)
T ss_dssp HHHHHTCC--EEEEECTT-CCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHH
T ss_pred hhhcCCCC--CcEEeCCC-cCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHHH
Confidence 9 67 99999998 5789999999999999999999999999999999999999999999988877899877555
Q ss_pred --HHHhhhcCCcccc--CCCCCchhHHHHHHHHHHHHHhCcc
Q 043137 393 --DLSVGLATGQIKT--GAPCRSERLAKYNQLLRIEEELGAE 430 (445)
Q Consensus 393 --~la~a~~~~~~~~--G~~~~~e~~~k~n~ll~i~~~l~~~ 430 (445)
||++++++.+++- |.+.+++|++|||||+||+++|..+
T Consensus 371 ~~hlaaa~~~~~i~~~pG~~~~~g~~~~~n~~~r~~~~~~~~ 412 (413)
T 1kcz_A 371 TTNIGMACGARQVLAKPGMGVDEGMMIVKNEMNRVLALVGRR 412 (413)
T ss_dssp HHHHHHHHTCSEEECCSSSSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCceeecCCCCCCcchhhhHHHHHHHHHHHhcc
Confidence 8888888888877 9988889999999999999998653
No 14
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=8.6e-51 Score=415.28 Aligned_cols=328 Identities=18% Similarity=0.226 Sum_probs=239.6
Q ss_pred ceEEEEEEeCCCceEEEeccC----CCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHH
Q 043137 20 PTVEVDVTTSDGHVARAAVPS----GASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMV 95 (445)
Q Consensus 20 ~~v~V~v~td~G~~G~g~~~~----~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~ 95 (445)
++++|+|+||+|++|||+++. |++. + ++.|+++ .....+++.++|.|+|+||.+++.+|+.|.
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~sGa~~--------r--~~~~~~~---~~~~~i~~~l~p~LiG~d~~~~~~i~~~l~ 117 (413)
T 1kko_A 51 ECVSVQLILENGAVAVGDCAAVQYSGAGG--------R--DPLFLAE---HFIPFLNDHIKPLLEGRDVDAFLPNARFFD 117 (413)
T ss_dssp EEEEEEEEETTSCEEEEEECCCTTTTSTT--------C--CCCCCHH---HHHHHHHHHTHHHHTTCBCSCSHHHHHHHH
T ss_pred ceEEEEEEECCCCEEEEEecccccccccc--------c--CccccHH---HHHHHHHHHHHHHHcCCChHhHHHHHHHHH
Confidence 568999999999999997652 3221 0 1235543 344557778999999999999999999998
Q ss_pred HHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc---eeeeeeEEeecCcccCCCCcccc
Q 043137 96 QQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL---VLPVPAFNVINGGSHAGNKLAMQ 172 (445)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~---~vp~~~~~~~~gg~~~~~~~~~~ 172 (445)
..... .+....+|++|||+||||+.||.+|+|||+||| |..+. +-++|+|++ +|.+..
T Consensus 118 -~~~~~-------~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~l~~~~vp~y~~--~g~~~~------ 178 (413)
T 1kko_A 118 -KLRID-------GNLLHTAVRYGLSQALLDATALASGRLKTEVVC---DEWQLPCVPEAIPLFGQ--SGDDRY------ 178 (413)
T ss_dssp -HCEET-------TEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---HHTTCCCCCCCCCEECC--CTTCTT------
T ss_pred -hhhcc-------cCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CccccccccCCeEEEEe--cCcccc------
Confidence 43210 111347899999999999999999999999999 74211 125555654 332210
Q ss_pred eeeeccCChhcHHHHHHHH----HHH-HHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH----HHHHHHHHHHH-hCC
Q 043137 173 EFMILPVGASCFKEAMKMG----VEV-YHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE----GLELLNTAIAK-AGY 242 (445)
Q Consensus 173 e~~~~p~~~~~~~~a~~~~----~~~-~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~----~l~~l~~av~~-~g~ 242 (445)
.+.++.++.. .++ |+.+ |.|+| . +.+.+.+ .++.+ +++|+ +|
T Consensus 179 ---------~~~~~~~~~~~~~~~~G~~~~i----K~KvG-------~------~~~~~~~~l~~d~~~v-~aiR~~~G- 230 (413)
T 1kko_A 179 ---------IAVDKMILKGVDVLPHALINNV----EEKLG-------F------KGEKLREYVRWLSDRI-LSLRSSPR- 230 (413)
T ss_dssp ---------HHHHHHHHTTCSEEEETTCCCC----CCCCC-------T------TSHHHHHHHHHHHHHH-HHHCSSTT-
T ss_pred ---------CCHHHHHHHHHHHHhCCCccEE----EEecC-------C------ChhhHHHHHHHHHHHH-HHHHHhhC-
Confidence 0112221111 012 3222 22322 1 1111222 11333 44543 45
Q ss_pred CCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC--Cee-eEECCCC----cCCHHHHHHH
Q 043137 243 TGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY--PIV-SIEDPFD----QDDWEHYAKL 315 (445)
Q Consensus 243 ~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~--~i~-~iEdP~~----~~D~~~~~~L 315 (445)
+++.|++|+|. +|.+. ..||.+++++++.+ ++++ ++. |||||++ ++|+++|++|
T Consensus 231 -~~~~L~vDan~--------~~~~~---------~~~~~~~A~~~~~~-L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l 291 (413)
T 1kko_A 231 -YHPTLHIDVYG--------TIGLI---------FDMDPVRCAEYIAS-LEKEAQGLPLYIEGPVDAGNKPDQIRMLTAI 291 (413)
T ss_dssp -CCCEEEEECTT--------HHHHH---------TTTCHHHHHHHHHH-TGGGGTTSCEEEECCCCCSSHHHHHHHHHHH
T ss_pred -CCCeEEEECCC--------ccccc---------cCCCHHHHHHHHHH-HHhccCCcceEEECCcCCCCCcccHHHHHHH
Confidence 47999999952 12221 16899999998655 5663 322 9999999 7899999999
Q ss_pred HHH-----hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh--
Q 043137 316 TSE-----VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED-- 388 (445)
Q Consensus 316 ~~~-----~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~-- 388 (445)
+++ ++ +||++||+ ++++++++++++.+++|++|||++++||||++++++++|+++|++++++|+++||.+
T Consensus 292 ~~~l~~~g~~--ipIa~dE~-~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~ 368 (413)
T 1kko_A 292 TKELTRLGSG--VKIVADEW-CNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISA 368 (413)
T ss_dssp HHHHHHHTCC--CEEEECTT-CCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHH
T ss_pred HHhcccCCCC--CcEEcCCC-CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHH
Confidence 999 66 99999997 578999999999999999999999999999999999999999999999887679987
Q ss_pred hHHHHHHhhhcCCcc--ccCCCCCchhHHHHHHHHHHHHHhCc
Q 043137 389 TFIADLSVGLATGQI--KTGAPCRSERLAKYNQLLRIEEELGA 429 (445)
Q Consensus 389 ~~~~~la~a~~~~~~--~~G~~~~~e~~~k~n~ll~i~~~l~~ 429 (445)
++++|||+++++.++ ++|...+++|++|||||+|||+++..
T Consensus 369 aa~~hlaaa~~~~~ip~kpG~g~~~~~~~~~n~l~r~~~~~~~ 411 (413)
T 1kko_A 369 RTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQT 411 (413)
T ss_dssp HHHHHHHHHHCCSEEECCSCSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCcccCCCCCCCCccHHHHHHHHHHHHHHHhc
Confidence 678899999998888 89999999999999999999998753
No 15
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=1.4e-49 Score=403.59 Aligned_cols=309 Identities=16% Similarity=0.226 Sum_probs=229.7
Q ss_pred CceEEEEEEEEEEecCC----CCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHh
Q 043137 1 MAITITAVKARQIFDSR----GNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIG 76 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~----g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~ 76 (445)
|.||||+|+++.+..+. .++.++|+|+||+|++|||++.. +++..++...+.+.++
T Consensus 1 m~MkI~~i~~~~~~~p~~~~~~~~~~~V~v~td~G~~G~GE~~~--------------------~~~~~~~~~~~~~~l~ 60 (393)
T 4dwd_A 1 MSLKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGTVGWGEASP--------------------MLGGIASLGVVARDIA 60 (393)
T ss_dssp -CCBEEEEEEEEEECCC-----CEEEEEEEEETTSCEEEEEECC--------------------GGGGHHHHHHHHHHTH
T ss_pred CCCEEEEEEEEEEcCCCcccccceEEEEEEEECCCCEEEEEccC--------------------cHHHHHHHHHHHHHHH
Confidence 88999999999886441 14579999999999999997652 1123444334345599
Q ss_pred hhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeE
Q 043137 77 PALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAF 156 (445)
Q Consensus 77 p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~ 156 (445)
|.|+|+||.+++++|+.|++.+... |++++..+|+||||+||||+.||.+|+|||+||| |..++++|++
T Consensus 61 p~liG~d~~~~e~~~~~l~~~~~~~------g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~~v~~y-- 129 (393)
T 4dwd_A 61 PFLEGQEVLDHAVLLDRMMHRLVKL------GPEGIATAALAACDIALWDLKGKLLGQPIYKLLG---GAWRTRLPCY-- 129 (393)
T ss_dssp HHHTTSBGGGHHHHHHHHHHHTGGG------CCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEEE--
T ss_pred HHHCCCCcccHHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceeeE--
Confidence 9999999999999999998443221 2234556899999999999999999999999999 9877888874
Q ss_pred EeecCcccCCCCcccceeeeccCChhcHHHH-HHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHH
Q 043137 157 NVINGGSHAGNKLAMQEFMILPVGASCFKEA-MKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNT 235 (445)
Q Consensus 157 ~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a-~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~ 235 (445)
.+++|+.. .. ++...+++ .+...++|+++| .|+|..... ...+.+.+.++++++|+
T Consensus 130 ~s~~g~~~-----~~--------~e~~~~~a~~~~~~~G~~~~K----lKvG~~~~~------~~~~~~~d~~~v~avR~ 186 (393)
T 4dwd_A 130 SSIGGNAA-----RS--------VDEVVREVARRVEAEQPAAVK----IRWDGDRTR------CDVDIPGDIAKARAVRE 186 (393)
T ss_dssp EEECCCSS-----SC--------HHHHHHHHHHHHHHHCCSEEE----EECCCCTTC------CSCCHHHHHHHHHHHHH
T ss_pred EecCccCC-----CC--------HHHHHHHHHHHHHHcCCCEEE----EccCCCCcc------cccCHHHHHHHHHHHHH
Confidence 44422110 11 12223444 444445666554 455421000 01123344555555555
Q ss_pred HHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHH
Q 043137 236 AIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKL 315 (445)
Q Consensus 236 av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L 315 (445)
++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|
T Consensus 187 a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~d~~~~~~l 237 (393)
T 4dwd_A 187 LL---G--PDAVIGFDA-----------------------NNGYSVGGAIRV-GRALEDLGYSWFEEPVQHYHVGAMGEV 237 (393)
T ss_dssp HH---C--TTCCEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCSEEECCSCTTCHHHHHHH
T ss_pred Hh---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcccHHHHHHH
Confidence 54 5 589999999 367899999987 566899999999999999999999999
Q ss_pred HHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHH--H
Q 043137 316 TSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIA--D 393 (445)
Q Consensus 316 ~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~--~ 393 (445)
+++++ +||++||+. .++++++++++.+ +|++|+|++++||||++++++++|+++|+++++++ + ++.++.++ |
T Consensus 238 ~~~~~--iPIa~dE~~-~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~-~~~i~~aa~~h 311 (393)
T 4dwd_A 238 AQRLD--ITVSAGEQT-YTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQ-T-QPGVGHFANIH 311 (393)
T ss_dssp HHHCS--SEEEBCTTC-CSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCC-C-CSSHHHHHHHH
T ss_pred HhhCC--CCEEecCCc-CCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-C-CcHHHHHHHHH
Confidence 99998 999999985 6799999999999 99999999999999999999999999999986544 4 67666544 5
Q ss_pred HHhhh
Q 043137 394 LSVGL 398 (445)
Q Consensus 394 la~a~ 398 (445)
|++++
T Consensus 312 laaa~ 316 (393)
T 4dwd_A 312 VLSTL 316 (393)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 55443
No 16
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=2.1e-49 Score=401.44 Aligned_cols=304 Identities=18% Similarity=0.194 Sum_probs=233.2
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||++...+ .++|++++...+...
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~-------------~~~y~~e~~~~~~~~ 71 (381)
T 3fcp_A 5 ATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIG-------------GLSYGVESPEAISSA 71 (381)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECST-------------TTTSSSCCHHHHHHH
T ss_pred cEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCEEEeccccCC-------------CCccCCCCHHHHHHH
Confidence 89999999988533 22 346899999999999999653211 123666778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
|++.++|.|+|+||.+++.+|+.|++.+. + ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 72 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~ 136 (381)
T 3fcp_A 72 ITHYLTPLLKGQPADNLNALTARMNGAIK----------G--NTFAKSAIETALLDAQGKALGLPVSALLG---GALQTA 136 (381)
T ss_dssp HHHTHHHHHTTSBSSCHHHHHHHHHHHCC----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCcCCHHHHHHHHHHHhc----------C--cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCc
Confidence 88889999999999999999999984332 1 15799999999999999999999999999 987888
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++.. ++.+ + +++.++++.+... .+|+++| .|+|. .+.+.+.++
T Consensus 137 v~~~~t--~~~~-------~---------~~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~ 182 (381)
T 3fcp_A 137 LPVLWT--LASG-------D---------TAKDIAEGEKLLAEGRHRAFK----LKIGA------------RELATDLRH 182 (381)
T ss_dssp EEBCEE--ECSS-------C---------HHHHHHHHHHHTC----CEEE----EECCS------------SCHHHHHHH
T ss_pred eeeEEE--ecCC-------C---------hHHHHHHHHHHHHhCCCCEEE----EecCC------------CChHHHHHH
Confidence 888532 2211 1 1122344444333 2465543 45441 112334555
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |+.||.++++++ .+.++++++.|||||++++|+
T Consensus 183 v~avR~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~ 233 (381)
T 3fcp_A 183 TRAIVEAL---G--DRASIRVDV-----------------------NQAWDAATGAKG-CRELAAMGVDLIEQPVSAHDN 233 (381)
T ss_dssp HHHHHHHT---C--TTCEEEEEC-----------------------TTCBCHHHHHHH-HHHHHHTTCSEEECCBCTTCH
T ss_pred HHHHHHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCccceeCCCCcccH
Confidence 55555544 5 579999999 367899999987 556899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++
T Consensus 234 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~ 309 (381)
T 3fcp_A 234 AALVRLSQQIE--TAILADEAV-ATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGT-MLEGTVG 309 (381)
T ss_dssp HHHHHHHHHSS--SEEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECC-SCCCHHH
T ss_pred HHHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCC-CCccHHH
Confidence 99999999998 999999985 6699999999999999999999999999999999999999999998776 5788776
Q ss_pred HHHHHHhhhcCC
Q 043137 390 FIADLSVGLATG 401 (445)
Q Consensus 390 ~~~~la~a~~~~ 401 (445)
.++.++++...+
T Consensus 310 ~aa~~hlaaa~~ 321 (381)
T 3fcp_A 310 TVASLHAWSTLP 321 (381)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHHhCC
Confidence 655555544333
No 17
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=2.5e-49 Score=400.97 Aligned_cols=306 Identities=17% Similarity=0.205 Sum_probs=235.1
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|+|++|+++.+.. +.+ +..++|+|+||+|++|||++...+ .++|++++...+...
T Consensus 6 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 6 SAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIG-------------GLAYGNESPDSIKTN 72 (382)
T ss_dssp TBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECST-------------TTTSSSCCHHHHHHH
T ss_pred CeeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCEEEEecccCC-------------CCccCCCCHHHHHHH
Confidence 3499999987742 333 356899999999999999653211 123666778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
|++.++|.|+|+||.+++++|+.|++.+. + ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 73 i~~~l~p~liG~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~ 137 (382)
T 3dgb_A 73 IDRFVAPLLIGQDASNINAAMLRLEQSIR----------G--NTFAKSGIESALLDAQGKRLGLPVSELLG---GRVRDA 137 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHHCC----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCccCHHHHHHHHHHHhc----------C--chHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCe
Confidence 88889999999999999999999984332 1 15799999999999999999999999999 987888
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++.. ++.+ + +++.++++.+... .+|+++| .|+|. .+.+.+.++
T Consensus 138 v~~~~t--~~~~-------~---------~~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~ 183 (382)
T 3dgb_A 138 LPVAWT--LASG-------D---------TAKDIAEAQKMLDLRRHRIFK----LKIGA------------GEVDRDLAH 183 (382)
T ss_dssp EEBCEE--ECSS-------C---------HHHHHHHHHHHHHTTSCSEEE----EECCS------------SCHHHHHHH
T ss_pred eeEEEE--ecCC-------C---------hHHHHHHHHHHHHhCCCCEEE----EeeCC------------CCHHHHHHH
Confidence 888532 2211 0 1122344443333 2454433 34331 122344566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |+.|+.++++++ .+.++++++.|||||++++|+
T Consensus 184 v~avR~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~ 234 (382)
T 3dgb_A 184 VIAIKKAL---G--DSASVRVDV-----------------------NQAWDEAVALRA-CRILGGNGIDLIEQPISRNNR 234 (382)
T ss_dssp HHHHHHHH---G--GGSEEEEEC-----------------------TTCBCHHHHHHH-HHHHHTTTCCCEECCBCTTCH
T ss_pred HHHHHHHc---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHhhcCcCeeeCCCCccCH
Confidence 66666655 5 479999999 367899999987 566899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++
T Consensus 235 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~ig 310 (382)
T 3dgb_A 235 AGMVRLNASSP--APIMADESI-ECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGT-MLEGGIG 310 (382)
T ss_dssp HHHHHHHHHCS--SCEEESTTC-SSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCHHH
T ss_pred HHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecC-CCccHHH
Confidence 99999999998 999999985 6699999999999999999999999999999999999999999998776 5788777
Q ss_pred HHHHHHhhhcCCcc
Q 043137 390 FIADLSVGLATGQI 403 (445)
Q Consensus 390 ~~~~la~a~~~~~~ 403 (445)
.++.++++...+.+
T Consensus 311 ~aa~~hlaaa~~~~ 324 (382)
T 3dgb_A 311 TLASAHAFLTLNKL 324 (382)
T ss_dssp HHHHHHHHTTSSCC
T ss_pred HHHHHHHHHcCCCC
Confidence 65555554444433
No 18
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=1.2e-49 Score=405.68 Aligned_cols=314 Identities=17% Similarity=0.201 Sum_probs=231.1
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhc
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALA 80 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~Li 80 (445)
|+||||+|++..+.. .....++|+|+||+|++|||++... ++ ..++...|++.++|.|+
T Consensus 4 ~~mkIt~v~~~~~~~-~~~~~~~V~v~td~G~~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~li 62 (401)
T 3sbf_A 4 KETIISDIHCIITKP-DRHNLITVVVETNEGVTGFGCATFQ-----------------QR---PLAVKTMVDEYLKPILI 62 (401)
T ss_dssp -CCBEEEEEEEEECS-SSSCEEEEEEEETTSCEEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHT
T ss_pred CCeEEEEEEEEEEcC-CCceEEEEEEEeCCCCEEEEccccC-----------------CC---HHHHHHHHHHHHHHHHc
Confidence 679999999987632 2236799999999999999976431 11 23445567778999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeec
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVIN 160 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~ 160 (445)
|+||.+++++|+.|++.. + |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++. .++
T Consensus 63 G~d~~~~e~~~~~~~~~~-----~--~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~~~ 130 (401)
T 3sbf_A 63 GKNANNIEDLWQMMMVNA-----Y--WRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFG---GKSRDAIPVYT--HAT 130 (401)
T ss_dssp TSBTTCHHHHHHHHHHTT-----S--SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEEEE--EEE
T ss_pred CCChhhHHHHHHHHHHhc-----c--cCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhC---CCcCCeeeEEE--eCC
Confidence 999999999999998321 1 22344456899999999999999999999999999 98888888754 222
Q ss_pred CcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccC--------CCCCCCC---CccChHHH
Q 043137 161 GGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVG--------DEGGFAP---NIQENKEG 229 (445)
Q Consensus 161 gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~--------~~g~~~~---~~~~~~~~ 229 (445)
+. + ++...+++.+...++|+++| .|+|....... ..|.+.. .++.+.++
T Consensus 131 ~~-------~---------~e~~~~~a~~~~~~G~~~~K----~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~ 190 (401)
T 3sbf_A 131 SD-------T---------MEGIYDLVEGFLEKGYKHIR----CQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTM 190 (401)
T ss_dssp ES-------S---------HHHHHHHHHHHHHTTCCEEE----EEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHH
T ss_pred CC-------C---------HHHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchHHHHHHHHH
Confidence 11 1 12234455554455676654 56553211000 0010000 01223444
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 191 v~avR~a~---G--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~~~ 241 (401)
T 3sbf_A 191 FKSLREKY---G--NQFHILHDV-----------------------HERLFPNQAIQF-AKEVEQYKPYFIEDILPPNQT 241 (401)
T ss_dssp HHHHHHHH---T--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSCEECSSCTTCG
T ss_pred HHHHHHHc---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChhHH
Confidence 55555544 5 589999999 367899999987 566899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++..++.++
T Consensus 242 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~~~s~i~ 318 (401)
T 3sbf_A 242 EWLDNIRSQSS--VSLGLGELF-NNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAPDMTPIG 318 (401)
T ss_dssp GGHHHHHTTCC--CCEEECTTC-CSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCTTSCHHH
T ss_pred HHHHHHHhhCC--CCEEeCCcc-CCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCcccchHH
Confidence 99999999998 999999985 679999999999999999999999999999999999999999998654433367665
Q ss_pred H--HHHHHhhhc
Q 043137 390 F--IADLSVGLA 399 (445)
Q Consensus 390 ~--~~~la~a~~ 399 (445)
. .+||+.++.
T Consensus 319 ~aA~~hlaaa~p 330 (401)
T 3sbf_A 319 AAVNTHLNVHLH 330 (401)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHhCC
Confidence 4 456655543
No 19
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.4e-49 Score=398.72 Aligned_cols=305 Identities=18% Similarity=0.214 Sum_probs=234.8
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++.... ++.|++++...+...
T Consensus 6 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 72 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPG-------------GPWWGGESVETMKAL 72 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSS-------------STTTTSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCEEEEecccCC-------------CCccCCCCHHHHHHH
Confidence 8999999987742 232 356899999999999999653211 123667778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
|++.++|.|+|+||.+++.+|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 73 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~~------------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~ 137 (383)
T 3i4k_A 73 VDGYLAPVLIGRAVSELAGIMADLERVVAR------------ARYAKAAVDVAMHDAWARSLNVPVRDLLG---GTVRDK 137 (383)
T ss_dssp HHHTTHHHHTTSBGGGHHHHHHHHHHHCCS------------CHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCSCSE
T ss_pred HHhhhhHHHcCCCccCHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCe
Confidence 888899999999999999999999843321 25799999999999999999999999999 987888
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++. +++.+ + +++.++++.+...+ +|+++| .|+|. .+.+.+.++
T Consensus 138 v~~~~--t~~~~-------~---------~~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~ 183 (383)
T 3i4k_A 138 VDVTW--ALGVL-------P---------LDVAVAEIEERIEEFGNRSFK----LKMGA------------GDPAEDTRR 183 (383)
T ss_dssp EEBCE--EECSC-------C---------HHHHHHHHHHHHHHHCCSEEE----EECCS------------SCHHHHHHH
T ss_pred EEEeE--EeeCC-------C---------HHHHHHHHHHHHHhcCCcEEE----EeeCC------------CCHHHHHHH
Confidence 88753 22211 1 12234455544444 565543 45441 122333444
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|++ +| +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 184 v~avR~a---~g--~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~ 234 (383)
T 3i4k_A 184 VAELARE---VG--DRVSLRIDI-----------------------NARWDRRTALHY-LPILAEAGVELFEQPTPADDL 234 (383)
T ss_dssp HHHHHHT---TT--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHHHTTCCEEESCSCTTCH
T ss_pred HHHHHHH---cC--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChhhH
Confidence 4444443 35 589999999 367899999987 567899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+..+
T Consensus 235 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~ 310 (383)
T 3i4k_A 235 ETLREITRRTN--VSVMADESV-WTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT-SLEGPIG 310 (383)
T ss_dssp HHHHHHHHHHC--CEEEESTTC-SSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC-SCCCHHH
T ss_pred HHHHHHHhhCC--CCEEecCcc-CCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC-CCccHHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999998877 4688766
Q ss_pred HHHHHHhhhcCCc
Q 043137 390 FIADLSVGLATGQ 402 (445)
Q Consensus 390 ~~~~la~a~~~~~ 402 (445)
.++.++++...+.
T Consensus 311 ~aa~~hlaaa~p~ 323 (383)
T 3i4k_A 311 TAASLQFAASTKA 323 (383)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCC
Confidence 5554444333333
No 20
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=2.3e-49 Score=404.62 Aligned_cols=319 Identities=18% Similarity=0.209 Sum_probs=236.1
Q ss_pred CceEEEEEEEEEEecCCCCc--eEEEEEEeCCCceEEEec-cCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhh
Q 043137 1 MAITITAVKARQIFDSRGNP--TVEVDVTTSDGHVARAAV-PSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGP 77 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~--~v~V~v~td~G~~G~g~~-~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p 77 (445)
|.|||++|+++.+.++.+++ +++|+|+||+|++|||++ +.. | .+...+...+++ |+|
T Consensus 1 m~MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~~---g----------------~~~~~~~~~i~~-l~p 60 (403)
T 2ox4_A 1 MSLKITKIEIFHVHTRPQSGQRPILVKVSTDEGIYGLGEAGIAY---G----------------VGGSAAAGILKD-YAA 60 (403)
T ss_dssp -CCCEEEEEEEEECCCTTTCCCCEEEEEEETTSCEEEEEESCSS---S----------------SCHHHHHHHHHH-HHH
T ss_pred CCCeEEEEEEEEecCCCCCCccceEEEEEeCCCCEEEEeecCCC---C----------------CchHHHHHHHHH-HHH
Confidence 78999999999998765555 679999999999999977 541 1 113455566776 999
Q ss_pred hhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEE
Q 043137 78 ALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFN 157 (445)
Q Consensus 78 ~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 157 (445)
.|+|+||.+++.+|+.|. ... +|..+.++++.+|++|||+||||+.||.+|+|||+||| |..++++|+ |+
T Consensus 61 ~l~G~d~~~~~~i~~~l~-~~~----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~--y~ 130 (403)
T 2ox4_A 61 LLIGEDPFNTEAIWEKLF-KKT----FWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLG---GKNREDLRV--YA 130 (403)
T ss_dssp HHTTCCTTCHHHHHHHHH-HSS----SGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSSEEE--EE
T ss_pred HcCCCCHHHHHHHHHHHH-Hhc----ccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceee--eE
Confidence 999999999999999998 322 11112345567899999999999999999999999999 976666665 55
Q ss_pred e-ec-C-cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhc------CCCCcccCCCCCCCC--CccCh
Q 043137 158 V-IN-G-GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKY------GQDATNVGDEGGFAP--NIQEN 226 (445)
Q Consensus 158 ~-~~-g-g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~------G~~~~~~~~~g~~~~--~~~~~ 226 (445)
+ ++ | +.|+.+..++++ ..+++.+...++|+.+| .|. |... ..+.|++.+ +++.+
T Consensus 131 ~~i~~g~~~~~~~~~~~e~---------~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~~--~s~~~g~~~~~~~~~~ 195 (403)
T 2ox4_A 131 SQLQFGWGKERKSKGRKEE---------YAEEALKAVAEGYDAVK----VDVLAHDRNGSRE--GVFLEGPLPSETIKIG 195 (403)
T ss_dssp ECGGGCSSSSCCCCCSHHH---------HHHHHHHHHHTTCSEEE----ECCSSSCTTSCCT--TCCCSSSCCHHHHHHH
T ss_pred eeccCCccccccccCCHHH---------HHHHHHHHHHcCCCEEE----EeccccCCccccc--cCcccCCCchHHHHHH
Confidence 4 44 3 444433323322 24556555556676655 232 2110 011122221 12223
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.+.++++|+++ | +++.|++|+| ++||.+++++++ +.+++|++.|||||+++
T Consensus 196 ~e~v~avr~av---G--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~~iE~P~~~ 246 (403)
T 2ox4_A 196 VERVEAIRNAV---G--PDVDIIVENH-----------------------GHTDLVSAIQFA-KAIEEFNIFFYEEINTP 246 (403)
T ss_dssp HHHHHHHHHHH---C--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECCSCT
T ss_pred HHHHHHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEeCCCCh
Confidence 44455444444 6 5899999993 578889999985 56899999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|+++||++++||||++++++++|+++|+++++++ +. +
T Consensus 247 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~-~~-s 321 (403)
T 2ox4_A 247 LNPRLLKEAKKKID--IPLASGERI-YSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHV-AG-T 321 (403)
T ss_dssp TSTHHHHHHHHTCC--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCC-CS-C
T ss_pred hhHHHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC-CC-C
Confidence 99999999999998 999999986 4599999999999999999999999999999999999999999987744 44 7
Q ss_pred hhhHH--HHHHhhh
Q 043137 387 EDTFI--ADLSVGL 398 (445)
Q Consensus 387 ~~~~~--~~la~a~ 398 (445)
.++.+ +||+.++
T Consensus 322 ~i~~aa~~hlaaa~ 335 (403)
T 2ox4_A 322 GVAEAASLHAEIAI 335 (403)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhC
Confidence 76654 5555544
No 21
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=1.7e-49 Score=406.39 Aligned_cols=313 Identities=18% Similarity=0.222 Sum_probs=231.2
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
+||||+|++..+. ......++|+|+||+|++|||++... |. ..++...|++.++|.|+|
T Consensus 26 ~mkIt~v~~~~~~-~~~~~~v~V~v~td~Gi~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~LiG 84 (422)
T 3tji_A 26 PVIIKNIECFITR-PDRHNLVTVRVTTEQGITGHGCATFQ-----------------QR---PLAVKTLVDEYLQPLMIG 84 (422)
T ss_dssp CCBEEEEEEEEEC-SSSSCEEEEEEEETTSCCEEEECCCT-----------------TS---HHHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEEc-CCCccEEEEEEEECCCCEEEEeccCC-----------------CC---HHHHHHHHHHHHHHHhCC
Confidence 7999999988763 22236799999999999999976431 11 234455677789999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++++|+.|++ .. + |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++. .+++
T Consensus 85 ~dp~~ie~~~~~l~~-~~----~--~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~~~~ 152 (422)
T 3tji_A 85 RDANNIEDLWQMMNV-NA----Y--WRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFG---GKSRDAIPAYS--HASG 152 (422)
T ss_dssp SBTTCHHHHHHHHHH-TT----S--SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEEEEE--EEEE
T ss_pred CCcccHHHHHHHHHH-hh----h--ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCeEEEEE--EeCC
Confidence 999999999999983 21 1 22344456899999999999999999999999999 98888888754 2221
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCccc----C----CCCCCCC---CccChHHHH
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNV----G----DEGGFAP---NIQENKEGL 230 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~----~----~~g~~~~---~~~~~~~~l 230 (445)
. + +++..+++.+...++|+++| .|+|...... . ..|.+.. .++.+.+++
T Consensus 153 ~-------~---------~e~~~~~a~~~~~~G~~~iK----lKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v 212 (422)
T 3tji_A 153 E-------T---------LEALFASVDALIAQGYRHIR----CQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMF 212 (422)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEEE----EEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHH
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchhHHHHHHHHH
Confidence 1 1 12234455555555676654 5655321000 0 0000000 012234445
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|++
T Consensus 213 ~avR~av---G--~d~~L~vDa-----------------------N~~~~~~~A~~~-~~~Le~~~i~~iEqP~~~~d~~ 263 (422)
T 3tji_A 213 HALREKY---G--WKLHILHDV-----------------------HERLFPQQAVQL-AKQLEPFQPYFIEDILPPQQSA 263 (422)
T ss_dssp HHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCGGGGG
T ss_pred HHHHHHc---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCeEECCCChhhHH
Confidence 5555444 6 589999999 367899999987 5678999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++..++.++.
T Consensus 264 ~~~~l~~~~~--iPIa~dE~~-~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~~~s~Ig~ 340 (422)
T 3tji_A 264 WLEQVRQQSC--VPLALGELF-NNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPGDMTPIGV 340 (422)
T ss_dssp GHHHHHHHCC--CCEEECTTC-CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHH
T ss_pred HHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCCCccHHHH
Confidence 9999999998 999999985 6699999999999999999999999999999999999999999986555433676654
Q ss_pred --HHHHHhhhc
Q 043137 391 --IADLSVGLA 399 (445)
Q Consensus 391 --~~~la~a~~ 399 (445)
.+||+.++.
T Consensus 341 aA~~hlaaa~p 351 (422)
T 3tji_A 341 AVNTHLNIHLH 351 (422)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHhCC
Confidence 456655543
No 22
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=1.6e-49 Score=406.37 Aligned_cols=322 Identities=13% Similarity=0.128 Sum_probs=241.2
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhc
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALA 80 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~Li 80 (445)
|.|||++|+++.+. +. .++++|+|+||+| +|||+++.+ .+..++...+++ ++|.|+
T Consensus 4 ~~MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~G~Ge~~~g--------------------~~~~~~~~~i~~-l~p~li 59 (410)
T 2qq6_A 4 SAPRITRVETAAIR-AV-GPSVLVRVWAGDE-HGLGECYPS--------------------APAAGIHHIVMN-MEEQLL 59 (410)
T ss_dssp CCCCCCEEEEEEEC-CC--CEEEEEEEETTE-EEEEEECCC--------------------SCHHHHHHHHHT-THHHHT
T ss_pred CCceEeEEEEEEEC-CC-CCEEEEEEEECCc-EEEEEecCC--------------------CChHHHHHHHHH-HHHHhC
Confidence 45899999999996 43 4589999999999 999977432 124666667776 999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeec
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVIN 160 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~ 160 (445)
|+||.+++.+|+.|.+...++. +.+.++.+|++|||+||||+.||.+|+|||+||| |..++++|+ |++++
T Consensus 60 G~d~~~~~~i~~~l~~~~~~~~-----~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~vp~--y~~~~ 129 (410)
T 2qq6_A 60 GEDPRDVERLYEKMRRWNIFTG-----GQAGAVITALSGIETALWDLAGKLQGVPVYRLLG---GAFRRRVRL--YADCN 129 (410)
T ss_dssp TCCTTCHHHHHHHHHHHTTTTT-----SSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTT---CCSCSEEEE--EEECC
T ss_pred CCCccHHHHHHHHHHHhhhccc-----CCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCccCceeE--EEecc
Confidence 9999999999999983221211 1345667899999999999999999999999999 976666665 55554
Q ss_pred -C-cccCCCCc-ccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhc----CCCCcccCCCCCCCC--CccChHHHHH
Q 043137 161 -G-GSHAGNKL-AMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKY----GQDATNVGDEGGFAP--NIQENKEGLE 231 (445)
Q Consensus 161 -g-g~~~~~~~-~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~----G~~~~~~~~~g~~~~--~~~~~~~~l~ 231 (445)
| +.|+.+.+ ++++++..| +..++++.+...++|+.+| .|. |..... +.|++.+ +++.+.+.++
T Consensus 130 ~g~~~h~~~~~~~~~~~~~~~--~~~~~~a~~~~~~Gf~~vK----ik~~~~~G~~~~~--~~G~~~~~~~~~~~~e~v~ 201 (410)
T 2qq6_A 130 AGTVDAAAHHIEGGLFEEGSN--EEYIAVAREAVERGFDAIK----LDVDDITGPLHRD--FWNGAISPREHEAMVARVA 201 (410)
T ss_dssp CSEECTTCCEEECCTTCSTHH--HHHHHHHHHHHHTTCSEEE----EECCCSSSTTCSC--SSSCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccCCH--HHHHHHHHHHHHcCCCEEE----eeccccCCcccCC--cCccccchhhHHHHHHHHH
Confidence 3 44443322 345554322 3445566666556666654 333 321111 2344443 2233445555
Q ss_pred HHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHH
Q 043137 232 LLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEH 311 (445)
Q Consensus 232 ~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~ 311 (445)
++|+++ | +++.|++|+| ++||.+++++++ +.+++|++.|||||++++|+++
T Consensus 202 avRea~---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEeP~~~~d~~~ 252 (410)
T 2qq6_A 202 AVREAV---G--PEVEVAIDMH-----------------------GRFDIPSSIRFA-RAMEPFGLLWLEEPTPPENLDA 252 (410)
T ss_dssp HHHHHH---C--SSSEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHH
T ss_pred HHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCeEECCCChhhHHH
Confidence 555554 6 5899999993 568889999985 5689999999999999999999
Q ss_pred HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH-
Q 043137 312 YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF- 390 (445)
Q Consensus 312 ~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~- 390 (445)
+++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|+++++ |++. +.++.
T Consensus 253 ~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~-h~~~-s~i~~a 327 (410)
T 2qq6_A 253 LAEVRRSTS--TPICAGENV-YTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAP-HNVS-SPVGTV 327 (410)
T ss_dssp HHHHHTTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCC-BCCS-CHHHHH
T ss_pred HHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEee-cCCC-cHHHHH
Confidence 999999988 999999985 57999999999999999999999999999999999999999999877 5444 76664
Q ss_pred -HHHHHhhh
Q 043137 391 -IADLSVGL 398 (445)
Q Consensus 391 -~~~la~a~ 398 (445)
.+||+.++
T Consensus 328 a~~hlaaa~ 336 (410)
T 2qq6_A 328 AAAHVCAAV 336 (410)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHHhC
Confidence 45555554
No 23
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=7.8e-49 Score=402.01 Aligned_cols=311 Identities=16% Similarity=0.221 Sum_probs=234.6
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGK 82 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 82 (445)
||||+|++..+ +.++..++|+|+||+|++|||++... + . ..++...|++.|+|.|+|+
T Consensus 24 mkIt~v~~~~~--~~~~~~v~V~v~td~G~~G~GE~~~~---~--------------~---~~~~~~~i~~~l~p~LiG~ 81 (425)
T 3vcn_A 24 LKIIDAKVIVT--CPGRNFVTLKITTEDGITGVGDATLN---G--------------R---ELSVVSFLQDHMVPSLIGR 81 (425)
T ss_dssp CBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT---T--------------C---HHHHHHHHHHTTHHHHTTC
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccCC---C--------------C---hHHHHHHHHHHHHHHhCCC
Confidence 89999998766 33457899999999999999976431 1 0 2344556777899999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCc
Q 043137 83 DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGG 162 (445)
Q Consensus 83 d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 162 (445)
||.+++++|+.|++.. +|+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++.. +++.
T Consensus 82 dp~~ie~i~~~~~~~~-------~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~--~~~~ 149 (425)
T 3vcn_A 82 DAHQIEDIWQFFYRGS-------YWRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLG---GACRTGVTVYGH--ANGE 149 (425)
T ss_dssp BTTCHHHHHHHHHHHT-------SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSSSSEEEEEE--EEES
T ss_pred ChhhHHHHHHHHHhhc-------ccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeeeEEEe--CCCC
Confidence 9999999999998422 122344456899999999999999999999999999 988888888543 2211
Q ss_pred ccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCC----cccCCCC-CCCC------C---------
Q 043137 163 SHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDA----TNVGDEG-GFAP------N--------- 222 (445)
Q Consensus 163 ~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~----~~~~~~g-~~~~------~--------- 222 (445)
+ +++..+++.+...++|+++| .|+|... ..+...+ .+.+ .
T Consensus 150 -------~---------~e~~~~~a~~~~~~Gf~~iK----lKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~ 209 (425)
T 3vcn_A 150 -------T---------IEDTIAEAVKYKAMGYKAIR----LQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKY 209 (425)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHH
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEEE----EeecCccccccccccccccccCcccccccccccccchhH
Confidence 1 12334555555556776664 5555310 0000000 0011 1
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.||||
T Consensus 210 ~~~d~e~v~avR~a~---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEq 260 (425)
T 3vcn_A 210 LNSVPKLFERAREVL---G--WDVHLLHDV-----------------------HHRLTPIEAARL-GKDLEPYRLFWLED 260 (425)
T ss_dssp HTTTHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEEC
T ss_pred HHHHHHHHHHHHHHc---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEEC
Confidence 344567777777666 5 589999999 367899999987 56789999999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++
T Consensus 261 P~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 337 (425)
T 3vcn_A 261 SVPAENQAGFRLIRQHTT--TPLAVGEIF-AHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGA 337 (425)
T ss_dssp CSCCSSTTHHHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCC
T ss_pred CCChhhHHHHHHHHhcCC--CCEEeCCCc-CCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccC
Confidence 999999999999999998 999999985 67999999999999999999999999999999999999999999866554
Q ss_pred CCCChhhH--HHHHHhhhc
Q 043137 383 SGETEDTF--IADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~~ 399 (445)
..++.++. .+||+.++.
T Consensus 338 ~~~s~ig~aA~~hlaaa~p 356 (425)
T 3vcn_A 338 TDLSPVTMAAALHFDMSIT 356 (425)
T ss_dssp TTSCHHHHHHHHHHHHTCS
T ss_pred CcccHHHHHHHHHHHHhCC
Confidence 33676654 455555443
No 24
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=6.5e-49 Score=403.77 Aligned_cols=314 Identities=17% Similarity=0.195 Sum_probs=230.6
Q ss_pred Cc-eEEEEEEEEEEecCCCCceEEEEEEeCC-CceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhh
Q 043137 1 MA-ITITAVKARQIFDSRGNPTVEVDVTTSD-GHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPA 78 (445)
Q Consensus 1 ~~-mkI~~v~~~~v~~~~g~~~v~V~v~td~-G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~ 78 (445)
|+ ||||+|++..+. ......++|+|+||+ |++|||++... ++ ..++...|++.|+|.
T Consensus 24 ~~~mkIt~v~~~~~~-~~~~~~v~V~v~Td~~Gi~G~GE~~~~-----------------~~---~~~~~~~i~~~l~p~ 82 (440)
T 3t6c_A 24 MSNLFITNVKTILTA-PGGIDLVVVKIETNEPGLYGLGCATFT-----------------QR---IYAVQSAIDEYLAPF 82 (440)
T ss_dssp --CCCEEEEEEEEEC-TTSSCEEEEEEEESSTTCEEEEECCCG-----------------GG---HHHHHHHHHTTHHHH
T ss_pred CCCCEEEEEEEEEEC-CCCceEEEEEEEEcCCCCEEEEeeccC-----------------CC---HHHHHHHHHHHHHHH
Confidence 45 899999997662 222367999999999 99999976431 11 234455677779999
Q ss_pred hcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEe
Q 043137 79 LAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNV 158 (445)
Q Consensus 79 LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~ 158 (445)
|+|+||.+++++|+.|++.. +|+.+.+..+|+||||+||||+.||.+|+|||+||| |+.++++|++. .
T Consensus 83 LiG~dp~~ie~i~~~~~~~~-------~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~ 150 (440)
T 3t6c_A 83 LIGKDPARIEDIWQSAAVSG-------YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLG---GKCRDGIALYV--H 150 (440)
T ss_dssp HTTCCTTCHHHHHHHHHHTT-------SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEEEEE--E
T ss_pred HcCCChhhHHHHHHHHHHhc-------ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeeEEEE--E
Confidence 99999999999999998321 122344556899999999999999999999999999 98888888744 3
Q ss_pred ecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCc-----------ccCCCCCCC-------
Q 043137 159 INGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAT-----------NVGDEGGFA------- 220 (445)
Q Consensus 159 ~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~-----------~~~~~g~~~------- 220 (445)
+++. +. ++.++++.+...++|+++| .|+|.... ++..+.++.
T Consensus 151 ~~~~-------~~---------e~~~~~a~~~~~~Gf~~~K----~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 210 (440)
T 3t6c_A 151 TDGA-------DE---------VEVEDSARAKMEEGYQYIR----CQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRT 210 (440)
T ss_dssp ECCS-------SH---------HHHHHHHHHHHHTTCSEEE----ECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSS
T ss_pred CCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccccccccccc
Confidence 3221 11 2234455555555676654 45542110 000000000
Q ss_pred --CC--------ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHH
Q 043137 221 --PN--------IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKS 290 (445)
Q Consensus 221 --~~--------~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~ 290 (445)
+. ++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+
T Consensus 211 ~~~~~~~~~~~~~~~d~~~v~avR~a~---G--~d~~L~vDa-----------------------N~~~~~~~A~~~-~~ 261 (440)
T 3t6c_A 211 KAPGIYFDPEAYAKSIPRLFDHLRNKL---G--FSVELLHDA-----------------------HERITPINAIHM-AK 261 (440)
T ss_dssp CCSSEECCHHHHHHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HH
T ss_pred ccccccccchhhHHHHHHHHHHHHHhc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HH
Confidence 10 122344455555544 5 589999999 367899999987 55
Q ss_pred hhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHH
Q 043137 291 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMS 370 (445)
Q Consensus 291 ~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A 370 (445)
.++++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|
T Consensus 262 ~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A 338 (440)
T 3t6c_A 262 ALEPYQLFFLEDPVAPENTEWLKMLRQQSS--TPIAMGELF-VNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYS 338 (440)
T ss_dssp HTGGGCCSEEECSSCGGGGGGHHHHHHHCC--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHH
T ss_pred HhhhcCCCEEECCCChhhHHHHHHHHhhcC--CCEEeCccc-CCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHH
Confidence 689999999999999999999999999998 999999985 67999999999999999999999999999999999999
Q ss_pred HHcCCcEEecCCCCCChhhH--HHHHHhhhc
Q 043137 371 KQAGWGVMASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 371 ~~~g~~~~~~~~~~et~~~~--~~~la~a~~ 399 (445)
+++|++++++++..++.++. .+||+.++.
T Consensus 339 ~~~gi~~~~h~~~~~s~Ig~aa~~hlaaa~p 369 (440)
T 3t6c_A 339 ELNGVRTAWHSPGDISPIGVCANMHLDLSSP 369 (440)
T ss_dssp HHTTCEECCCCSSSSCHHHHHHHHHHHHHCT
T ss_pred HHcCCEEEeccCCCccHHHHHHHHHHHHhCC
Confidence 99999986655434676654 556655543
No 25
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=7e-49 Score=402.23 Aligned_cols=311 Identities=14% Similarity=0.219 Sum_probs=231.7
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGK 82 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 82 (445)
||||+|++..+ +.++..++|+|+||+|++|||++... + . ..++...|++.|+|.|+|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~~---~--------------~---~~~~~~~i~~~l~p~LiG~ 80 (424)
T 3v3w_A 23 MKIVDAKVIVT--CPGRNFVTLKIVTDQGIYGIGDATLN---G--------------R---EKSVVSYLEDYLIPVLIGR 80 (424)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT---T--------------C---HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccCC---C--------------C---hHHHHHHHHHHHHHHhcCC
Confidence 89999998766 23457899999999999999976431 1 0 2344556777899999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCc
Q 043137 83 DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGG 162 (445)
Q Consensus 83 d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 162 (445)
||.+++++|+.|++.. + |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++.. +++.
T Consensus 81 dp~~ie~i~~~~~~~~-----~--~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~--~~~~ 148 (424)
T 3v3w_A 81 DPQQIEDIWQFFYRGA-----Y--WRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLG---GKSRERILSYTH--ANGK 148 (424)
T ss_dssp CTTCHHHHHHHHHHHT-----S--SCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCSCSSEEEEEE--EEES
T ss_pred ChhhHHHHHHHHHhcc-----c--cCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CcCCCceeEEEe--CCCC
Confidence 9999999999998422 1 22344456899999999999999999999999999 988888888543 2211
Q ss_pred ccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCc--ccCC--C-CCCC------CC---------
Q 043137 163 SHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAT--NVGD--E-GGFA------PN--------- 222 (445)
Q Consensus 163 ~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~--~~~~--~-g~~~------~~--------- 222 (445)
+ +++..+++.+...++|+++| .|+|.... ..+. . ..+. |.
T Consensus 149 -------~---------~e~~~~~a~~~~~~Gf~~iK----lKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~ 208 (424)
T 3v3w_A 149 -------D---------LDSTLEAVRKAKDKGYKAIR----VQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKY 208 (424)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHH
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEEE----EeccCccccccccccccccccccccccccccccccchhH
Confidence 1 12334555555556676654 45552100 0000 0 0001 11
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.||||
T Consensus 209 ~~~d~e~v~avR~av---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEq 259 (424)
T 3v3w_A 209 LNYIPDVFAAVRKEF---G--PDIHLLHDV-----------------------HHRLTPIEAARL-GKALEPYHLFWMED 259 (424)
T ss_dssp HHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEEC
T ss_pred HHHHHHHHHHHHHHc---C--CCCcEEEeC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEEC
Confidence 222344455555544 6 589999999 367899999987 56789999999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++++
T Consensus 260 P~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 336 (424)
T 3v3w_A 260 AVPAENQESFKLIRQHTT--TPLAVGEVF-NSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGA 336 (424)
T ss_dssp CSCCSSTTHHHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CCChHhHHHHHHHHhhCC--CCEEEccCc-CCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 999999999999999998 999999985 67999999999999999999999999999999999999999999877664
Q ss_pred CCCChhh--HHHHHHhhhc
Q 043137 383 SGETEDT--FIADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~--~~~~la~a~~ 399 (445)
..++.++ +.+||+.++.
T Consensus 337 ~~~s~ig~aA~~hlaaa~p 355 (424)
T 3v3w_A 337 TDLSPVCMGAALHFDYWVP 355 (424)
T ss_dssp TTSCHHHHHHHHHHHHHCT
T ss_pred CcccHHHHHHHHHHHHhCC
Confidence 3367665 4556655543
No 26
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=1.1e-48 Score=396.35 Aligned_cols=302 Identities=15% Similarity=0.179 Sum_probs=227.2
Q ss_pred eEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
||||+|+++.+. .+.+ +..++|+|+||+|++|||++... ......
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~G~GE~~~~-----------------------~~~~~~ 57 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGP-----------------------ARPNAA 57 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECSC-----------------------HHHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCEEEEEecCC-----------------------cchHHH
Confidence 899999998773 2333 35689999999999999976431 111234
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+.+.++|.|+|+||.+++.+|+.|++.+.. .+..++..+|++|||+||||+.||.+|+|||+||| |+.+++
T Consensus 58 ~~~~~~~~liG~d~~~~e~~~~~l~~~~~~------~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---g~~~~~ 128 (378)
T 4hpn_A 58 VVQAYSGWLIGQDPRQTEKIWAVLYNALRD------QGQRGLSLTALSGIDIALWDIKGKHYGASISMLLG---GRWRES 128 (378)
T ss_dssp HHHHHHTTTTTSCTTCHHHHHHHHHHHTCT------TCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHhhh------cccccchHHHHHHHHHHHHHHhhhhccCccccccC---CccccC
Confidence 567899999999999999999999854322 12344556899999999999999999999999999 988888
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++... +.... +..+ ..+..+++.+...++|+++| .|.| .+.+.+.+++
T Consensus 129 ~~~y~~~----~~~~~---~~~~------~~~~~~~~~~~~~~Gf~~~K----~k~g-------------~~~~~di~~v 178 (378)
T 4hpn_A 129 VRAYATG----SFKRD---NVDR------VSDNASEMAERRAEGFHACK----IKIG-------------FGVEEDLRVI 178 (378)
T ss_dssp EEEEEEC----CCBCT---TCCH------HHHHHHHHHHHHHTTCSEEE----EECC-------------SCHHHHHHHH
T ss_pred cceeeee----ccccc---cchh------HHHHHHHHHHHHHhccceec----cccc-------------CChHHHHHHH
Confidence 8875432 21110 0100 11223334333334444332 3322 1223345556
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+.+|+++ | +++.|++|+ |+.||.++++++ .+.++++++.|||||++++|++
T Consensus 179 ~avr~~~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~ 229 (378)
T 4hpn_A 179 AAVREAI---G--PDMRLMIDA-----------------------NHGYTVTEAITL-GDRAAGFGIDWFEEPVVPEQLD 229 (378)
T ss_dssp HHHHHHH---T--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSCEECCSCTTCHH
T ss_pred HHHHHhc---C--CcEEEEEec-----------------------CcccCHHHHHHH-HhhhhhcccchhhcCCCccchh
Confidence 6555555 6 689999999 367899999998 4568999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh-
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT- 389 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~- 389 (445)
++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++ ++|+ .++..+
T Consensus 230 ~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v-~~h~-~~~~i~~ 304 (378)
T 4hpn_A 230 AYARVRAGQP--IPVAGGETW-HGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRI-VPHV-WGTGVQI 304 (378)
T ss_dssp HHHHHHHHSS--SCEEECTTC-CHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEE-CCBC-CSSHHHH
T ss_pred hhHHHHhhCC--ceeeCCcCc-cchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeE-EeCC-CCcHHHH
Confidence 9999999998 999999985 569999999999999999999999999999999999999999996 7885 456554
Q ss_pred -HHHHHHhhhcC
Q 043137 390 -FIADLSVGLAT 400 (445)
Q Consensus 390 -~~~~la~a~~~ 400 (445)
+.+|+++++..
T Consensus 305 aa~~h~~aa~~~ 316 (378)
T 4hpn_A 305 AAALQFMAAMTP 316 (378)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHHcCc
Confidence 55666666543
No 27
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=5e-49 Score=397.72 Aligned_cols=298 Identities=18% Similarity=0.252 Sum_probs=230.5
Q ss_pred CceEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
|.|||++|+++.+. ++.+ +..++|+|+||+|++|||+++..+ .|++++..++.
T Consensus 1 m~MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~Ge~~~~~---------------~~~get~~~~~ 65 (379)
T 3r0u_A 1 MVSKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPATT---------------AITGDTLQGMQ 65 (379)
T ss_dssp -CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECCH---------------HHHCCCHHHHH
T ss_pred CCCEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCEEEEEEECCC---------------CccCCCHHHHH
Confidence 78999999998774 2333 356899999999999999764321 14466677777
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCc
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN 148 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~ 148 (445)
..|++.++|.|+|+||.+++.+|+.|.+.+ ....+|++|||+||||+.||.+|+|||+||| |. +
T Consensus 66 ~~i~~~l~p~l~G~d~~~~~~~~~~~~~~~------------~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~-r 129 (379)
T 3r0u_A 66 YIIREIFAPVILGSDLSDYKQTLELAFKKV------------MFNSAAKMAIDLAYHDLLAKEQDISVAKLLG---AK-A 129 (379)
T ss_dssp HHHHHTTHHHHTTCBGGGHHHHHHHHHTTC------------SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-C
T ss_pred HHHHHHhHHHhcCCCcccHHHHHHHHHHhc------------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-C
Confidence 788888999999999999999999988321 1125799999999999999999999999999 86 6
Q ss_pred ceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH
Q 043137 149 LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 149 ~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
+++|++.. ++.+ + ++..++++.+...++|+.+| .|+|. +.+.+.+
T Consensus 130 ~~v~~y~t--~g~~-------~---------~e~~~~~a~~~~~~Gf~~~K----lK~g~-------------~~~~d~~ 174 (379)
T 3r0u_A 130 NSIVTDVS--ISCG-------N---------VAETIQNIQNGVEANFTAIK----VKTGA-------------DFNRDIQ 174 (379)
T ss_dssp CEEEBCEE--ECCC-------C---------HHHHHHHHHHHHHTTCCEEE----EECSS-------------CHHHHHH
T ss_pred CeEEEEEE--ecCC-------C---------HHHHHHHHHHHHHcCCCEEe----eecCC-------------CHHHHHH
Confidence 78887543 2111 1 12223444444444555443 34331 2233455
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhcc--CCeeeEECCCCc
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISD--YPIVSIEDPFDQ 306 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~--~~i~~iEdP~~~ 306 (445)
+++++|+++ | +++.|++|+ |++||.++++++ .+.+++ +++.|||||+++
T Consensus 175 ~v~avR~a~---g--~~~~L~vDa-----------------------N~~w~~~~A~~~-~~~l~~~~~~l~~iEeP~~~ 225 (379)
T 3r0u_A 175 LLKALDNEF---S--KNIKFRFDA-----------------------NQGWNLAQTKQF-IEEINKYSLNVEIIEQPVKY 225 (379)
T ss_dssp HHHHHHHHC---C--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHTSCCCEEEEECCSCT
T ss_pred HHHHHHHhc---C--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCCcEEEECCCCc
Confidence 555555443 4 489999999 367899999987 567899 899999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +.|+
T Consensus 226 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~-~~es 301 (379)
T 3r0u_A 226 YDIKAMAEITKFSN--IPVVADESV-FDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGC-MMES 301 (379)
T ss_dssp TCHHHHHHHHHHCS--SCEEESTTC-SSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCC
T ss_pred ccHHHHHHHHhcCC--CCEEeCCcc-CCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeC-CCcc
Confidence 99999999999998 999999985 6799999999999999999999999999999999999999999997765 5688
Q ss_pred hhh--HHHHHHhh
Q 043137 387 EDT--FIADLSVG 397 (445)
Q Consensus 387 ~~~--~~~~la~a 397 (445)
.++ +++|||++
T Consensus 302 ~i~~aa~~hlaaa 314 (379)
T 3r0u_A 302 PAGILATASFALA 314 (379)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 665 55666666
No 28
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=1.2e-48 Score=394.88 Aligned_cols=303 Identities=16% Similarity=0.182 Sum_probs=230.2
Q ss_pred CceEEEEEEEEEEecCC-------CCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHH
Q 043137 1 MAITITAVKARQIFDSR-------GNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNA 73 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~-------g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~ 73 (445)
|.|||++|+++.+..+. ....++|+|+||+|++|||+.+. +...+...|++
T Consensus 1 ~~MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~----------------------~~~~~~~~i~~ 58 (374)
T 3sjn_A 1 MVLKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGIVGVGEADS----------------------SPLVVQACIEA 58 (374)
T ss_dssp -CCBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSCEEEEEESS----------------------CHHHHHHHHHC
T ss_pred CCcEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCCEEEEcCCC----------------------ChHHHHHHHHh
Confidence 78999999999985431 11238999999999999988321 23455556766
Q ss_pred h--------HhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccC
Q 043137 74 I--------IGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG 145 (445)
Q Consensus 74 ~--------l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G 145 (445)
. ++|.|+|+||.+++++|+.|++.+... +++++..+|++|||+||||+.||.+|+|||+||| |
T Consensus 59 ~~~~~~~~~l~p~liG~d~~~~~~~~~~l~~~~~~~------~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g 129 (374)
T 3sjn_A 59 PQTNFYCNGLKRLLIGENALEIERLWNKMYWGSNYM------GRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLG---G 129 (374)
T ss_dssp CCSBTTBCCHHHHHTTSBTTCHHHHHHHHHHHTTTT------CSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---C
T ss_pred hhccchHhHHHHHHcCCCcccHHHHHHHHHHhhhhc------CCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---C
Confidence 6 999999999999999999998443221 2355667899999999999999999999999999 9
Q ss_pred CCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccC
Q 043137 146 NKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQE 225 (445)
Q Consensus 146 ~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~ 225 (445)
+.++++|++ .+ + + . .+. ++...+++.+...++|+++| .|+|. .| .+.+.
T Consensus 130 ~~r~~v~~y-~~-~--~--~---~~~--------~e~~~~~a~~~~~~Gf~~iK----lk~g~-------~g---~~~~~ 178 (374)
T 3sjn_A 130 KYRDKIRCY-GT-F--I--P---ADK--------PEDNVAIVQGLKDQGFSSIK----FGGGV-------MG---DDPDT 178 (374)
T ss_dssp CSCSEEEEE-EE-E--C--C---CSS--------GGGGHHHHHHHHTTTCSEEE----EECTT-------TT---SCHHH
T ss_pred CcCCceeEE-ec-c--C--C---CCC--------HHHHHHHHHHHHHcCCCEEE----eccCC-------CC---CCHHH
Confidence 778888885 11 1 1 1 000 12234455554444565554 44441 11 12334
Q ss_pred hHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccC-HHHHHHHHHHhhccCCeeeEECCC
Q 043137 226 NKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKIS-GDALKDLYKSFISDYPIVSIEDPF 304 (445)
Q Consensus 226 ~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t-~~~ai~~~~~~l~~~~i~~iEdP~ 304 (445)
+.++++++|+++ | +++.|++|+ |++|| .++++++ .+.++++++.|||||+
T Consensus 179 d~~~v~avR~a~---g--~~~~l~vDa-----------------------n~~~~d~~~A~~~-~~~l~~~~i~~iEqP~ 229 (374)
T 3sjn_A 179 DYAIVKAVREAA---G--PEMEVQIDL-----------------------ASKWHTCGHSAMM-AKRLEEFNLNWIEEPV 229 (374)
T ss_dssp HHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTTTCSHHHHHHH-HHHSGGGCCSEEECSS
T ss_pred HHHHHHHHHHHh---C--CCCeEEEEC-----------------------CCCCCCHHHHHHH-HHHhhhcCceEEECCC
Confidence 455565555554 6 589999999 36788 9999987 5678999999999999
Q ss_pred CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 043137 305 DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~ 384 (445)
+++|++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +
T Consensus 230 ~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~- 304 (374)
T 3sjn_A 230 LADSLISYEKLSRQVS--QKIAGGESL-TTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHG-F- 304 (374)
T ss_dssp CTTCHHHHHHHHHHCS--SEEEECTTC-CHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBC-C-
T ss_pred CcccHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC-C-
Confidence 9999999999999998 999999985 5699999999999999999999999999999999999999999986654 4
Q ss_pred CChhhHH--HHHHhhhc
Q 043137 385 ETEDTFI--ADLSVGLA 399 (445)
Q Consensus 385 et~~~~~--~~la~a~~ 399 (445)
++.++.+ +||++++.
T Consensus 305 ~~~i~~aa~~hlaaa~~ 321 (374)
T 3sjn_A 305 STGILLHASVHFLAACE 321 (374)
T ss_dssp SCHHHHHHHHHHHHTCT
T ss_pred CcHHHHHHHHHHHHhCC
Confidence 6766644 45555543
No 29
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=7.2e-49 Score=401.65 Aligned_cols=311 Identities=16% Similarity=0.189 Sum_probs=231.9
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
.||||+|++..+ +.++..++|+|+||+|++|||++... + . ..++...|++.|+|.|+|
T Consensus 16 ~mkIt~v~~~~~--~~~~~~~~V~v~td~G~~G~GE~~~~---~--------------~---~~~~~~~i~~~l~p~LiG 73 (418)
T 3r4e_A 16 HMKITAARVIIT--CPGRNFVTLKIETDQGVYGIGDATLN---G--------------R---ELSVVAYLQEHVAPCLIG 73 (418)
T ss_dssp CCCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT---T--------------C---HHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccCC---C--------------C---hHHHHHHHHHHHHHHhcC
Confidence 399999998765 33457899999999999999976431 1 0 234455677789999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++++|+.|++.. + |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++.. +++
T Consensus 74 ~dp~~ie~l~~~~~~~~-----~--~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~--~~~ 141 (418)
T 3r4e_A 74 MDPRRIEDIWQYVYRGA-----Y--WRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLG---GRSRDGIMVYGH--ANG 141 (418)
T ss_dssp SCTTCHHHHHHHHHHHT-----S--SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSCSSEEEEEE--EEE
T ss_pred CChhhHHHHHHHHHHhc-----c--cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CccCCeeeEEEe--CCC
Confidence 99999999999998422 1 22344456899999999999999999999999999 988888888543 221
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCccc--C---------C-CCCCCCC-------
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNV--G---------D-EGGFAPN------- 222 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~--~---------~-~g~~~~~------- 222 (445)
. + +++..+++.+...++|+++| .|+|...... + . .++ .|.
T Consensus 142 ~-------~---------~e~~~~~a~~~~~~Gf~~~K----~k~G~~~~~~~~g~~~~~~~~~~~~~~-~p~~~~~~~~ 200 (418)
T 3r4e_A 142 S-------D---------IAETVEAVGHYIDMGYKAIR----AQTGVPGIKDAYGVGRGKLYYEPADAS-LPSVTGWDTR 200 (418)
T ss_dssp S-------S---------HHHHHHHHHHHHHTTCSEEE----EEECCTTC------------------C-CCCEEEECHH
T ss_pred C-------C---------HHHHHHHHHHHHHcCCCEEE----EecCCcccccccccccccccccccccc-ccccccccch
Confidence 1 1 12234455555555676654 4555311000 0 0 000 011
Q ss_pred --ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeE
Q 043137 223 --IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSI 300 (445)
Q Consensus 223 --~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~i 300 (445)
++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.||
T Consensus 201 ~~~~~d~~~v~avR~a~---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~i 251 (418)
T 3r4e_A 201 KALNYVPKLFEELRKTY---G--FDHHLLHDG-----------------------HHRYTPQEAANL-GKMLEPYQLFWL 251 (418)
T ss_dssp HHHHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEE
T ss_pred hHHHHHHHHHHHHHHHc---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEE
Confidence 222344455555544 6 589999999 367899999987 567899999999
Q ss_pred ECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEec
Q 043137 301 EDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMAS 380 (445)
Q Consensus 301 EdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~ 380 (445)
|||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++
T Consensus 252 EqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h 328 (418)
T 3r4e_A 252 EDCTPAENQEAFRLVRQHTV--TPLAVGEIF-NTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCH 328 (418)
T ss_dssp ESCSCCSSGGGGHHHHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ECCCCccCHHHHHHHHhcCC--CCEEEcCCc-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 99999999999999999998 999999985 679999999999999999999999999999999999999999998776
Q ss_pred CCCCCChhh--HHHHHHhhhc
Q 043137 381 HRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 381 ~~~~et~~~--~~~~la~a~~ 399 (445)
++..++.++ +.+||+.++.
T Consensus 329 ~~~~~s~ig~aA~~hlaaa~p 349 (418)
T 3r4e_A 329 GPTDLSPVTMGCALHFDTWVP 349 (418)
T ss_dssp CCTTSCHHHHHHHHHHHHHCT
T ss_pred CCCCccHHHHHHHHHHHHhCC
Confidence 643367655 4556665543
No 30
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=2.4e-48 Score=398.82 Aligned_cols=317 Identities=13% Similarity=0.129 Sum_probs=230.9
Q ss_pred eEEEEEEEEEEecC----CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhh
Q 043137 3 ITITAVKARQIFDS----RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPA 78 (445)
Q Consensus 3 mkI~~v~~~~v~~~----~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~ 78 (445)
||||+|+++.+..+ .++..++|+|+||+|++|||++.... ++ ..++...|++.++|.
T Consensus 2 MkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~~G~GE~~~~~----------------~~---~~~v~~~i~~~l~p~ 62 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAAS----------------VG---PEAMRAVIEDVFARH 62 (433)
T ss_dssp CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEEcCCCCccCCceEEEEEEEECCCCEEEEeccCCC----------------CC---HHHHHHHHHHHHHHH
Confidence 89999999988532 14578999999999999999754311 11 244455677889999
Q ss_pred hcCCCCCCHHHHHHHHHHHhccCCCcccccccc-cchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEE
Q 043137 79 LAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQK-LGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFN 157 (445)
Q Consensus 79 LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~-~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 157 (445)
|+|+||.+++++|+.|++.. + |.++. +..+|+|||||||||+.||.+|+|||+||| |+.++++|++.+.
T Consensus 63 LiG~dp~~ie~~~~~l~~~~-----~--~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~~ 132 (433)
T 3rcy_A 63 MEGENPENIELMFRRVYSSG-----F--TQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLG---GKMNPRIRAYTYL 132 (433)
T ss_dssp TTTSCTTCHHHHHHHHHHTT-----T--CCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSSEEEEEEC
T ss_pred hCCCCcccHHHHHHHHHhcc-----c--ccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeEEEEEEE
Confidence 99999999999999998321 1 21222 456799999999999999999999999999 9888888875431
Q ss_pred ee-cCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC---CccChHHHHHHH
Q 043137 158 VI-NGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAP---NIQENKEGLELL 233 (445)
Q Consensus 158 ~~-~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~---~~~~~~~~l~~l 233 (445)
.. +|... ..... .++..++++.+...++|+++| .|.|..... ..+..+ +++.+.++++++
T Consensus 133 ~~~~g~~~-~~~~~--------~~e~~~~~a~~~~~~Gf~~iK----lk~g~~~~~---~~G~~~~~~~~~~d~e~v~av 196 (433)
T 3rcy_A 133 YPLPHHPI-TPFWT--------SADMAAESAADCVARGYTAVK----FDPAGPYTL---RGGHMPAMTDISLSVEFCRKI 196 (433)
T ss_dssp CCCTTSCH-HHHTT--------CHHHHHHHHHHHHHTTCSEEE----ECCSCCCBT---TCCBCCCHHHHHHHHHHHHHH
T ss_pred cccCCccc-ccCCC--------CHHHHHHHHHHHHHcCCCEEE----EcCCCCccc---ccCCCcchhhHHHHHHHHHHH
Confidence 10 22000 00000 112334455555555666554 444421110 011122 122334455555
Q ss_pred HHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHH
Q 043137 234 NTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 234 ~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~ 313 (445)
|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+++++
T Consensus 197 R~av---G--~d~~L~vDa-----------------------n~~~t~~~A~~~-~~~Le~~~i~~iEeP~~~~~~~~~~ 247 (433)
T 3rcy_A 197 RAAV---G--DKADLLFGT-----------------------HGQFTTAGAIRL-GQAIEPYSPLWYEEPVPPDNVGAMA 247 (433)
T ss_dssp HHHH---T--TSSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHH
T ss_pred HHHh---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHhhhcCCCEEECCCChhhHHHHH
Confidence 5544 6 589999999 367889999987 5678999999999999999999999
Q ss_pred HHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHH
Q 043137 314 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIAD 393 (445)
Q Consensus 314 ~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~ 393 (445)
+|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |+ .++.++.++.
T Consensus 248 ~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~-h~-~~s~i~~aa~ 322 (433)
T 3rcy_A 248 QVARAVR--IPVATGERL-TTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAP-HL-YAGPVEWAAN 322 (433)
T ss_dssp HHHHHSS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEECC-CC-SSCHHHHHHH
T ss_pred HHHhccC--CCEEecCCC-CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEe-cC-CCCHHHHHHH
Confidence 9999998 999999985 67999999999999999999999999999999999999999999854 54 4777665444
Q ss_pred HHhhh
Q 043137 394 LSVGL 398 (445)
Q Consensus 394 la~a~ 398 (445)
++++.
T Consensus 323 lhlaa 327 (433)
T 3rcy_A 323 VHFAA 327 (433)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 31
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=1.4e-48 Score=398.99 Aligned_cols=302 Identities=13% Similarity=0.133 Sum_probs=225.7
Q ss_pred ceEEEEEEEEEEecCCCC-------------------------------ceEEEEEEeCCCceEEEeccCCCccccccce
Q 043137 2 AITITAVKARQIFDSRGN-------------------------------PTVEVDVTTSDGHVARAAVPSGASTGIYEAL 50 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~-------------------------------~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~ 50 (445)
..||++|++..|..+... .+|+|||+||+|++|||++....
T Consensus 25 ~~~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~G~GE~~~~~-------- 96 (412)
T 4h1z_A 25 SDRVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYGLV-------- 96 (412)
T ss_dssp CCCEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCEEEEEEECSS--------
T ss_pred cceeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCEEEEecCCCC--------
Confidence 349999999887543211 23899999999999999764211
Q ss_pred eeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHH
Q 043137 51 ELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAH 130 (445)
Q Consensus 51 ~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk 130 (445)
+.....+.+++.|+|.|+|+||.+++.+|+.|++.+..... .+++..+|+||||+||||+.||
T Consensus 97 ------------~~~~~~~~i~~~lap~liG~dp~~~~~i~~~l~~~~~~~~~-----~~g~~~~A~saiD~ALwDl~gK 159 (412)
T 4h1z_A 97 ------------APRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRVRGY-----TGGFYVDALAAIDIALWDLAGK 159 (412)
T ss_dssp ------------CHHHHHHHHHHTHHHHHTTSCGGGHHHHHHHHHTTTGGGTC-----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhccc-----ccchHHHHHHHHHHHHHHHHHH
Confidence 13445667888999999999999999999999832221110 2334467999999999999999
Q ss_pred hcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 043137 131 VKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDA 210 (445)
Q Consensus 131 ~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~ 210 (445)
.+|+|||+||| |..++++|+++.. . .. +. .+...+.+.+...++|+++| .|.|
T Consensus 160 ~~g~Pl~~LLG---G~~~~~v~~y~s~----~-~~----~~--------~~~~~~~a~~~~~~G~~~~K----~k~g--- 212 (412)
T 4h1z_A 160 LAGLPVCKLLG---GQRRDRIAAYISG----L-PE----DT--------RAKRAELAAAWQAKGFSSFK----FASP--- 212 (412)
T ss_dssp HHTCBGGGGTT---CCCCSEEEEEECC----C-CC----SS--------HHHHHHHHHHHHHTTCCEEE----EEGG---
T ss_pred HcCCCHHHhcC---CCCCceEEEEecc----C-CC----Cc--------HHHHHHHHHHHHhcCcceec----cccc---
Confidence 99999999999 9888888875421 1 10 11 11122333333333454433 2222
Q ss_pred cccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHH
Q 043137 211 TNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKS 290 (445)
Q Consensus 211 ~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~ 290 (445)
...+.+.++++++|+++ | +++.|++|+ |+.||.++++++ .+
T Consensus 213 ----------~~~~~~~~~v~~vR~~~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~ 253 (412)
T 4h1z_A 213 ----------VADDGVAKEMEILRERL---G--PAVRIACDM-----------------------HWAHTASEAVAL-IK 253 (412)
T ss_dssp ----------GCTTCHHHHHHHHHHHH---C--SSSEEEEEC-----------------------CSCCCHHHHHHH-HH
T ss_pred ----------cchhhHHHHHHHHHhcc---C--CeEEEEecc-----------------------ccCCCHHHHHHH-HH
Confidence 11134567777777665 5 689999999 367899999988 55
Q ss_pred hhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHH
Q 043137 291 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMS 370 (445)
Q Consensus 291 ~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A 370 (445)
.++++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|+++ ||||++++++++|
T Consensus 254 ~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~div~~d~~~-GGit~~~kia~~A 329 (412)
T 4h1z_A 254 AMEPHGLWFAEAPVRTEDIDGLARVAASVS--TAIAVGEEW-RTVHDMVPRVARRALAIVQPEMGH-KGITQFMRIGAYA 329 (412)
T ss_dssp HHGGGCEEEEECCSCTTCHHHHHHHHHHCS--SEEEECTTC-CSHHHHHHHHHTTCCSEECCCHHH-HHHHHHHHHHHHH
T ss_pred hhcccccceecCCCCccchHHHHHHHhhcC--CccccCCcc-cchHhHHHHHHcCCCCEEEecCCC-CChHHHHHHHHHH
Confidence 689999999999999999999999999998 999999985 569999999999999999999986 9999999999999
Q ss_pred HHcCCcEEecCCCCCChhhH--HHHHHhhhc
Q 043137 371 KQAGWGVMASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 371 ~~~g~~~~~~~~~~et~~~~--~~~la~a~~ 399 (445)
+++|+++++ |.+.++.++. .+|++.++.
T Consensus 330 ~~~gi~v~~-h~~~~~~i~~aa~lhl~aa~~ 359 (412)
T 4h1z_A 330 HVHHIKVIP-HATIGAGIFLAASLQASAALA 359 (412)
T ss_dssp HHTTCEECC-CCCSSCSHHHHHHHHHHHHCT
T ss_pred HHCCCcEEe-cCCcchHHHHHHHHHHHHhCC
Confidence 999999855 5456776654 456555543
No 32
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=2e-48 Score=398.46 Aligned_cols=321 Identities=15% Similarity=0.225 Sum_probs=234.5
Q ss_pred CceEEEEEEEEEEecC--CCCc----eEEEEEEeCCCceEEEec-cCCCccccccceeeccCCCCCCCccHHHHHHHHHH
Q 043137 1 MAITITAVKARQIFDS--RGNP----TVEVDVTTSDGHVARAAV-PSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNA 73 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~--~g~~----~v~V~v~td~G~~G~g~~-~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~ 73 (445)
|.|||++|+++.+..+ .+.| +++|+|+||+|++|||++ +.. | .+...+...+++
T Consensus 1 m~MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~~---g----------------~~~~~~~~~i~~ 61 (410)
T 2gl5_A 1 MSLKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGLAY---G----------------AGAKAGVGIIRD 61 (410)
T ss_dssp -CCCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSCEEEEEESCSS---S----------------TTHHHHHHHHHH
T ss_pred CCceEEEEEEEEecccccccCcccccceEEEEEeCCCCEEEEeecCcC---C----------------CChHHHHHHHHH
Confidence 7899999999999652 1112 579999999999999987 541 1 113445556776
Q ss_pred hHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeee
Q 043137 74 IIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPV 153 (445)
Q Consensus 74 ~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~ 153 (445)
|+|.|+|+||.+++.+|+.|. ... +|..+.+++..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 62 -l~p~liG~d~~~~~~i~~~l~-~~~----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~ 132 (410)
T 2gl5_A 62 -LAPLIVGEDPLNIEKIWEFFF-RKT----FWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG---GKTNEKLRT 132 (410)
T ss_dssp -HGGGTTTSCTTCHHHHHHHHH-HSS----SGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---SCSCSSEEE
T ss_pred -HHHHhCCCChHHHHHHHHHHH-Hhc----ccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCceeE
Confidence 999999999999999999998 321 11112345567899999999999999999999999999 876666665
Q ss_pred eeEEe-ec-C-cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhc------CCCC----cccCCCCCCC
Q 043137 154 PAFNV-IN-G-GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKY------GQDA----TNVGDEGGFA 220 (445)
Q Consensus 154 ~~~~~-~~-g-g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~------G~~~----~~~~~~g~~~ 220 (445)
|++ ++ | +.|+.+..++++ ..+++.+...++|+.+| .|. |... .+. ..|++.
T Consensus 133 --y~~~i~~g~~~~~~~~~~~~~---------~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~~~~~~~~~-~~GG~~ 196 (410)
T 2gl5_A 133 --YASQLQFGWGDKNHILVTPEE---------YAEAARAALDDGYDAIK----VDPLEIDRNGDDCVFQNRNR-NYSGLL 196 (410)
T ss_dssp --EEECGGGCCTTCCSCCCSHHH---------HHHHHHHHHHTTCSEEE----ECSSSBCTTSCBTTTSSCCG-GGGSCC
T ss_pred --eEecccCCccccccccCCHHH---------HHHHHHHHHHcCCCEEE----EeccccCCcccccccccccc-cccCcc
Confidence 554 44 3 334332222222 23455555555666655 232 2100 000 123332
Q ss_pred C--CccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCee
Q 043137 221 P--NIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIV 298 (445)
Q Consensus 221 ~--~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~ 298 (445)
+ +++.+.+.++.+|+++ | +++.|++|+| ++||.+++++++ +.+++|++.
T Consensus 197 ~~~~~~~~~e~v~avR~a~---G--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~ 247 (410)
T 2gl5_A 197 LADQLKMGEARIAAMREAM---G--DDADIIVEIH-----------------------SLLGTNSAIQFA-KAIEKYRIF 247 (410)
T ss_dssp CHHHHHHHHHHHHHHHHHH---C--SSSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEE
T ss_pred chhHHHHHHHHHHHHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCC
Confidence 2 2233345555555544 6 5899999993 578889999985 568999999
Q ss_pred eEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEE
Q 043137 299 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVM 378 (445)
Q Consensus 299 ~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~ 378 (445)
|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++
T Consensus 248 ~iE~P~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~ 324 (410)
T 2gl5_A 248 LYEEPIHPLNSDNMQKVSRSTT--IPIATGERS-YTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQ 324 (410)
T ss_dssp EEECSSCSSCHHHHHHHHHHCS--SCEEECTTC-CTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred eEECCCChhhHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 9999999999999999999998 999999985 5699999999999999999999999999999999999999999987
Q ss_pred ecCCCCCChhhH--HHHHHhhhc
Q 043137 379 ASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 379 ~~~~~~et~~~~--~~~la~a~~ 399 (445)
+++ + ++.++. .+||+.+++
T Consensus 325 ~h~-~-~s~i~~aa~~hlaaa~~ 345 (410)
T 2gl5_A 325 VHV-C-GGPVSTVAALHMETAIP 345 (410)
T ss_dssp CCC-C-SSHHHHHHHHHHHHHCT
T ss_pred ecC-C-CCHHHHHHHHHHHHhCC
Confidence 744 4 476664 456655543
No 33
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=3.7e-48 Score=395.47 Aligned_cols=320 Identities=17% Similarity=0.207 Sum_probs=225.3
Q ss_pred Cc-eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhh
Q 043137 1 MA-ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPAL 79 (445)
Q Consensus 1 ~~-mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~L 79 (445)
|+ ||||+|++..+. .+++.++|+|+||+|++|||++.. + ...+...|++.++|.|
T Consensus 1 m~~mkIt~v~~~~~~--~~~~~~~V~v~td~G~~G~GE~~~--------------------~--~~~~~~~i~~~l~p~l 56 (410)
T 3dip_A 1 MSLPRITALRTIRLP--ERPKLIWVEVETEDGLTGLGETFR--------------------G--AQAVEAVLHEQTAPAI 56 (410)
T ss_dssp --CCBEEEEEEEEET--TEEEEEEEEEEETTSCEEEEEEES--------------------C--HHHHHHHHHHTHHHHH
T ss_pred CCCCeEEEEEEEEEC--CCCCEEEEEEEECCCCEEEEeCCC--------------------C--hHHHHHHHHHHHHHHh
Confidence 66 899999987762 235679999999999999988321 1 1344556777899999
Q ss_pred cCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEee
Q 043137 80 AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVI 159 (445)
Q Consensus 80 iG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~ 159 (445)
+|+||.+++++|+.|+ . . .++|+.++...+|+|||||||||+.||.+|+|||+||| |+.++++|++++...
T Consensus 57 iG~dp~~~e~~~~~~~-~--~---~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~ 127 (410)
T 3dip_A 57 IGRAAENITSISSELL-N--P---YVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALG---GAARDRVPVYATCAG 127 (410)
T ss_dssp TTSBTTCHHHHHHHHT-C--C---SSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEEEEEECT
T ss_pred cCCCcchHHHHHHHHH-H--H---HHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCcCCceeEEEeccc
Confidence 9999999999999998 3 1 23355555667899999999999999999999999999 988888998654221
Q ss_pred cCcc-cCC------------CCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCCC--Cc
Q 043137 160 NGGS-HAG------------NKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKK-KYGQDATNVGDEGGFAP--NI 223 (445)
Q Consensus 160 ~gg~-~~~------------~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~-k~G~~~~~~~~~g~~~~--~~ 223 (445)
.+|. +.. ......+.++ ....+.+.+...++|+++| . +++....++| .... ++
T Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~~G~~~~K----~~~~~~~~~K~G---~~~~~~~~ 196 (410)
T 3dip_A 128 YDFNTSLGGRRSIGSAELSTGPYDDQVAFM----RDAGVLAESLVAEGYAAMK----IWPFDDFASITP---HHISLTDL 196 (410)
T ss_dssp TTC--------------------------------CHHHHHHHHHHTTCSEEE----ECTTHHHHTTCT---TCCCHHHH
T ss_pred ccccccccccccccccccccccccchhhhh----hhHHHHHHHHHHcCCCEEE----ECCccCcccccc---CcCCHHHH
Confidence 1110 000 0000000000 0001112222233455443 2 0000000111 1111 12
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||
T Consensus 197 ~~d~e~v~avR~a~---g--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEqP 247 (410)
T 3dip_A 197 KDGLEPFRKIRAAV---G--QRIEIMCEL-----------------------HSLWGTHAAARI-CNALADYGVLWVEDP 247 (410)
T ss_dssp HHHHHHHHHHHHHH---T--TSSEEEEEC-----------------------TTCBCHHHHHHH-HHHGGGGTCSEEECC
T ss_pred HHHHHHHHHHHHHc---C--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECC
Confidence 23345555555554 5 589999999 367899999987 567899999999999
Q ss_pred -CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 304 -FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 304 -~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
++++|++++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|+++++++
T Consensus 248 ~~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~- 323 (410)
T 3dip_A 248 IAKMDNIPAVADLRRQTR--APICGGENL-AGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHX- 323 (410)
T ss_dssp BSCTTCHHHHHHHHHHHC--CCEEECTTC-CSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECS-
T ss_pred CCCcccHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeC-
Confidence 89999999999999998 999999985 6799999999999999999999999999999999999999999986654
Q ss_pred CCCChh--hHHHHHHhhhc
Q 043137 383 SGETED--TFIADLSVGLA 399 (445)
Q Consensus 383 ~~et~~--~~~~~la~a~~ 399 (445)
+ +.+ ++.+||+.++.
T Consensus 324 ~--s~i~~aa~~hlaaa~p 340 (410)
T 3dip_A 324 T--GPVALMAGLHLALHAP 340 (410)
T ss_dssp S--CHHHHHHHHHHHHHCT
T ss_pred c--cHHHHHHHHHHHHhCC
Confidence 3 554 45666666654
No 34
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=1.9e-48 Score=397.02 Aligned_cols=324 Identities=11% Similarity=0.121 Sum_probs=230.5
Q ss_pred ceEEEEEEEEEEecC----CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhh
Q 043137 2 AITITAVKARQIFDS----RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGP 77 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~----~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p 77 (445)
+||||+|+++.+..+ .++..++|+|+||+|++|||++.... ++ .......+++.++|
T Consensus 1 ~MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~~l~p 61 (404)
T 4e5t_A 1 SMRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGITGYGEIYNAT----------------FG---PDLVAKMAEDVFAR 61 (404)
T ss_dssp -CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEeccCCcccCCCceEEEEEEECCCCEEEEeeccCC----------------Cc---hHHHHHHHHHHHHH
Confidence 499999999988643 23567999999999999999864311 11 23444567778899
Q ss_pred hhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEE
Q 043137 78 ALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFN 157 (445)
Q Consensus 78 ~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~ 157 (445)
.|+|+||.+++++|+.|++.. ++.+.+....+|+|||||||||+.||.+|+|||+||| |+.++++|++.+.
T Consensus 62 ~liG~dp~~~e~~~~~~~~~~------~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~~ 132 (404)
T 4e5t_A 62 QFAGEDPHHIEKLWHKTYGAG------YTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLG---GKVHERLRSYTYL 132 (404)
T ss_dssp HTTTSCTTCHHHHHHHHHTTT------SCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEEEEEC
T ss_pred HhcCCChhHHHHHHHHHHHhh------hhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCcCeEEEEEEe
Confidence 999999999999999998321 1111223336799999999999999999999999999 9878888886532
Q ss_pred eecCcc-cCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC---ccChHHHHHHH
Q 043137 158 VINGGS-HAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN---IQENKEGLELL 233 (445)
Q Consensus 158 ~~~gg~-~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~---~~~~~~~l~~l 233 (445)
...++. +-....... +..+++.++++.+...++|+++| .|.|.... +..| ..+. ++.+.++++++
T Consensus 133 ~~~~~~~~p~~d~~~~----~~~~e~~~~~a~~~~~~G~~~~K----lK~g~~~~--~~~g-~~~~~~~~~~d~~~v~av 201 (404)
T 4e5t_A 133 YPTDGDVYPDPDKPNV----YNDADMAAEAAAKAVDQGFTAVK----FDPAGAYT--IYDG-HQPSLEDLERSEAFCKQI 201 (404)
T ss_dssp CC----------CCCT----TTCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCS-BCCCHHHHHHHHHHHHHH
T ss_pred cccccccccccccccc----CCCHHHHHHHHHHHHHcCCCEEe----eCCCCCCc--cccc-ccccHHHHHHHHHHHHHH
Confidence 110000 000000000 01122334455555555666654 45442100 0011 1111 23344555555
Q ss_pred HHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHH
Q 043137 234 NTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 234 ~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~ 313 (445)
|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+++++
T Consensus 202 R~a~---G--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~~~~~~~ 252 (404)
T 4e5t_A 202 RAAV---G--TKADLLFGT-----------------------HGQFTVSGAKRL-ARRLEAYDPLWFEEPIPPEKPEDMA 252 (404)
T ss_dssp HHHH---G--GGSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHH
T ss_pred HHHc---C--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCcEEECCCCcccHHHHH
Confidence 5554 5 589999999 367899999987 5678999999999999999999999
Q ss_pred HHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH--H
Q 043137 314 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF--I 391 (445)
Q Consensus 314 ~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~--~ 391 (445)
+|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+. ++.++. .
T Consensus 253 ~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i~~aa~ 327 (404)
T 4e5t_A 253 EVARYTS--IPVATGERL-CTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIA-PHLY-CGPLVALAN 327 (404)
T ss_dssp HHHHHCS--SCEEECTTC-CHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEEC-CCCS-SCHHHHHHH
T ss_pred HHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcHHHHHHH
Confidence 9999998 999999985 6699999999999999999999999999999999999999999974 5643 566654 4
Q ss_pred HHHHhhh
Q 043137 392 ADLSVGL 398 (445)
Q Consensus 392 ~~la~a~ 398 (445)
+||+.++
T Consensus 328 ~hlaaa~ 334 (404)
T 4e5t_A 328 IQLATCS 334 (404)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 4555443
No 35
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=3.1e-48 Score=396.09 Aligned_cols=318 Identities=13% Similarity=0.100 Sum_probs=231.1
Q ss_pred eEEEEEEEEEEecC----CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhh
Q 043137 3 ITITAVKARQIFDS----RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPA 78 (445)
Q Consensus 3 mkI~~v~~~~v~~~----~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~ 78 (445)
||||+|+++.+..+ .++..++|+|+||+|++|||++.... +. ...+...+++.++|.
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~~l~p~ 61 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGIEGVGEIYSAT----------------FG---PKAMAPIIDDVFERH 61 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCCS----------------SC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCCEEEEeecCCC----------------CC---HHHHHHHHHHHhHHH
Confidence 89999999988643 23567999999999999999864311 11 234455677788999
Q ss_pred hcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEe
Q 043137 79 LAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNV 158 (445)
Q Consensus 79 LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~ 158 (445)
|+|+||.+++++|+.|++.. ++.+.+....+|+|||||||||+.||.+|+|||+||| |+.++++|++.+.
T Consensus 62 LiG~dp~~~e~~~~~l~~~~------~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~- 131 (412)
T 4e4u_A 62 LLNRDPHHVERLFRQAYSSG------FTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLG---GRIHERLRSYTYL- 131 (412)
T ss_dssp TTTSCTTCHHHHHHHHHHTT------TCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEEEEEC-
T ss_pred hCCCChhHHHHHHHHHHHhh------hhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEEEEec-
Confidence 99999999999999998321 1111222336799999999999999999999999999 9878888885532
Q ss_pred ecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC---ccChHHHHHHHHH
Q 043137 159 INGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN---IQENKEGLELLNT 235 (445)
Q Consensus 159 ~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~---~~~~~~~l~~l~~ 235 (445)
..+. ...... +..+++..+++.+...++|+++| .|.|.... +..| ..+. ++.+.++++++|+
T Consensus 132 -~~~~-~~~~~~------~~~~e~~~~~a~~~~~~G~~~iK----lK~g~~~~--~~~g-~~~~~~~~~~d~~~v~avR~ 196 (412)
T 4e4u_A 132 -YPKN-AKGEYD------YDDPDLAAECAAENVKLGFTAVK----FDPAGPYT--AYSG-HQLSLEVLDRCELFCRRVRE 196 (412)
T ss_dssp -CCBC-TTSCBC------SSCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCC-BCCCHHHHHHHHHHHHHHHH
T ss_pred -cCCc-cccccc------CCCHHHHHHHHHHHHHcCCCEEE----ECCCCCCc--cccc-cccchhhHHHHHHHHHHHHH
Confidence 1110 000000 01122334555555555676654 45442110 0011 1121 2233445555555
Q ss_pred HHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHH
Q 043137 236 AIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKL 315 (445)
Q Consensus 236 av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L 315 (445)
++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|
T Consensus 197 a~---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~~~~l 247 (412)
T 4e4u_A 197 AV---G--SKADLLFGT-----------------------HGQMVPSSAIRL-AKRLEKYDPLWFEEPVPPGQEEAIAQV 247 (412)
T ss_dssp HH---T--TSSEEEECC-----------------------CSCBCHHHHHHH-HHHHGGGCCSEEECCSCSSCHHHHHHH
T ss_pred Hh---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHhhhcCCcEEECCCChhhHHHHHHH
Confidence 44 5 589999999 367899999987 567899999999999999999999999
Q ss_pred HHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH--HHH
Q 043137 316 TSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF--IAD 393 (445)
Q Consensus 316 ~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~--~~~ 393 (445)
+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|+ .++.++. .+|
T Consensus 248 ~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~-~h~-~~s~i~~aa~~h 322 (412)
T 4e4u_A 248 AKHTS--IPIATGERL-TTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIA-PHL-YNGPVGAAASIQ 322 (412)
T ss_dssp HHTCS--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEEC-CCC-CSCHHHHHHHHH
T ss_pred HhhCC--CCEEecCcc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEE-ecC-CCcHHHHHHHHH
Confidence 99998 999999985 6699999999999999999999999999999999999999999975 463 3576654 445
Q ss_pred HHhhh
Q 043137 394 LSVGL 398 (445)
Q Consensus 394 la~a~ 398 (445)
|+.++
T Consensus 323 laaa~ 327 (412)
T 4e4u_A 323 LATCT 327 (412)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 55443
No 36
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=6.5e-48 Score=391.29 Aligned_cols=301 Identities=18% Similarity=0.179 Sum_probs=225.5
Q ss_pred ceEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.||||+|+++.+..+ .+ +..++|+|+||+|++|||++... +++...+..
T Consensus 19 ~MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~G~Ge~~~~-------------------~~~~~~~~~ 79 (388)
T 4h83_A 19 GLTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDE-------------------HETMFDIDR 79 (388)
T ss_dssp -CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEECCC-------------------CTTHHHHHH
T ss_pred CCEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCEEEEEecCC-------------------cccHHHHHH
Confidence 499999999888432 22 35689999999999999975421 223456666
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.+++.|+|.|+|+||.+++++|+.|. .... +.++.+....+|+|||||||||+.||.+|+|||+||| |. ++
T Consensus 80 ~i~~~lap~LiG~dp~~ie~l~~~~~-~~~~----~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---g~-~~ 150 (388)
T 4h83_A 80 IIHEELAPTLIGQDAMAIERLWDSGY-KVTF----DILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWG---GY-RN 150 (388)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHG-GGGC----CTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS-CS
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHH-hhhh----hhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcC---CC-cC
Confidence 78899999999999999999999998 3321 1122234456899999999999999999999999999 85 56
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|++.++...+ +.. +...+++.+...++|+++| .|.| + .+.+.+.++
T Consensus 151 ~~~~y~~~~~~~--------~~~--------~~~~~~~~~~~~~G~~~~K----ikvg----------~--~~~~~d~~~ 198 (388)
T 4h83_A 151 ELPMIAIGGYYG--------EPL--------GSIADEMHNYQELGLAGVK----FKVG----------G--LSAAEDAAR 198 (388)
T ss_dssp EEEEEEEECCTT--------CTT--------CSHHHHHHHHHHHTBSEEE----EECS----------S--SCHHHHHHH
T ss_pred ceEEEeeccccC--------CCH--------HHHHHHHHHHHHcCCceEe----ecCC----------C--CCHHHHHHH
Confidence 778765432111 011 1123344444444555443 3432 1 122334556
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc-CC
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ-DD 308 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~-~D 308 (445)
++.+|+++ | +++.|++|+ |+.||.++++++ .+.++++++.|||||+++ +|
T Consensus 199 v~avR~~~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~iEeP~~~~~d 249 (388)
T 4h83_A 199 ITAAREAA---G--DDFIICIDA-----------------------NQGYKPAVAVDL-SRRIADLNIRWFEEPVEWHND 249 (388)
T ss_dssp HHHHHHHH---C--SSSEEEEEC-----------------------TTCBCHHHHHHH-HHHTTTSCCCCEESCBCSTTH
T ss_pred HHHHHHhc---C--CCeEEEEec-----------------------CcCCCHHHHHHH-HHHhhhcCcceeecCcccccc
Confidence 66665555 6 589999999 367899999988 456899999999999986 57
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+.+ .+|. ++
T Consensus 250 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v-~~h~--~~-- 321 (388)
T 4h83_A 250 KRSMRDVRYQGS--VPVCAGQTE-FSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQM-GHHE--EP-- 321 (388)
T ss_dssp HHHHHHHHHHSS--SCEEECTTC-SSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEE-CCCS--CH--
T ss_pred hHHHHHHHhhcC--CCccCCccc-cChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEE-EecC--HH--
Confidence 999999999998 999999985 669999999999999999999999999999999999999999985 5552 33
Q ss_pred hHHHHHHhhhc
Q 043137 389 TFIADLSVGLA 399 (445)
Q Consensus 389 ~~~~~la~a~~ 399 (445)
+..+|+++++.
T Consensus 322 ~~~~h~~aa~~ 332 (388)
T 4h83_A 322 QVSTHLLASQP 332 (388)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHHHHHhh
Confidence 44578877764
No 37
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.4e-48 Score=391.70 Aligned_cols=304 Identities=17% Similarity=0.192 Sum_probs=225.6
Q ss_pred eEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+. .+.+ +..++|+|+|| |++|||++.... .+.|.+++.+++...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~td-G~~G~GE~~~~~-------------~p~~~~e~~~~~~~~ 66 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GLVGVGEGGSVG-------------GPVWSAECAETIKII 66 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TBCCEEECCCST-------------TTTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEEC-CcEEEEEecCCC-------------CCccCcccHHHHHHH
Confidence 899999998774 2333 35699999986 999999653211 133667778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |..++.
T Consensus 67 i~~~l~p~liG~d~~~~~~~~~~~~~~~~----------~--~~~A~said~AlwDl~gK~~g~Pl~~lLG---g~~~~~ 131 (370)
T 2chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVT----------G--NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSA 131 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHTTCS----------S--CHHHHHHHHHHHHHHHHHHTTCCHHHHTT---CCSCSE
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHhhccc----------c--cHHHHHHHHHHHHHHHHHhcCCccccccC---Cccccc
Confidence 99999999999999999999999983221 1 14699999999999999999999999999 988777
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++. .+..+. . .+...+..+... .+|+. .+.++|. .+.+.+.++
T Consensus 132 ~~~~~--~~~~~~-------~---------~~~~~~~~~~~~~~g~~~-----------~K~Kvg~-----~~~~~d~~~ 177 (370)
T 2chr_A 132 IPIAW--TLASGD-------T---------KRDLDSAVEMIERRRHNR-----------FKVKLGF-----RSPQDDLIH 177 (370)
T ss_dssp EEBEE--EECSSC-------H---------HHHHHHHHHHHHTTSCCE-----------EEEECSS-----SCHHHHHHH
T ss_pred cceee--eeccCc-------h---------hhhHHHHHHHHhhcccce-----------eeccccc-----CChHHHHHH
Confidence 77633 222221 0 011112211110 11211 1222221 111223334
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++.+|++ +| +++.|++|+ |+.||.++++++ .+.++++++.|||||++++|+
T Consensus 178 v~avr~~---~g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~iEeP~~~~d~ 228 (370)
T 2chr_A 178 MEALSNS---LG--SKAYLRVDV-----------------------NQAWDEQVASVY-IPELEALGVELIEQPVGRENT 228 (370)
T ss_dssp HHHHHHH---TT--TTSEEEEEC-----------------------TTCCCTHHHHHH-HHHHHTTTCCEEECCSCSSCH
T ss_pred HHHHHHh---cC--CCcEEEecC-----------------------CCCCCHHHHHHH-HHHHHhcCCceecCCCChhhh
Confidence 4444333 45 689999999 367889999987 556899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.++..+
T Consensus 229 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~~~~i~ 304 (370)
T 2chr_A 229 QALRRLSDNNR--VAIMADESL-STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTIG 304 (370)
T ss_dssp HHHHHHHHHCS--SEEEESSSC-CSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCC-CSCCHHH
T ss_pred hhhhHHhhhcc--CCccCCccC-CCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCC-CcccHHH
Confidence 99999999998 999999985 5699999999999999999999999999999999999999999987766 5678776
Q ss_pred HHHHHHhhhcCCc
Q 043137 390 FIADLSVGLATGQ 402 (445)
Q Consensus 390 ~~~~la~a~~~~~ 402 (445)
.++.++++...+.
T Consensus 305 ~aa~~hlaa~~p~ 317 (370)
T 2chr_A 305 TSVALQLYSTVPS 317 (370)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHHhCCC
Confidence 5555555444443
No 38
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=4.6e-48 Score=395.43 Aligned_cols=319 Identities=16% Similarity=0.203 Sum_probs=231.6
Q ss_pred ceEEEEEEEEEEecCCCCc-----eEEEEEEeCCCceEEEec-cCCCccccccceeeccCCCCCCCccHHHHHHHHHHhH
Q 043137 2 AITITAVKARQIFDSRGNP-----TVEVDVTTSDGHVARAAV-PSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAII 75 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~-----~v~V~v~td~G~~G~g~~-~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l 75 (445)
.|||++|+++.+..+..+| +++|+|+||+|++|||++ +.. | .+...+...+++ +
T Consensus 3 ~MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~~G~Ge~a~~~---g----------------~~~~~~~~~i~~-l 62 (407)
T 2o56_A 3 LMKITSVDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGLAY---G----------------VGASAGIGMAKD-L 62 (407)
T ss_dssp CCCEEEEEEEECCCCC-----CCCCEEEEEEETTSCEEEEEESCSS---S----------------SCHHHHHHHHHH-H
T ss_pred CCEEEEEEEEEeccccCCCcccceeEEEEEEeCCCCEEEEeeccCC---C----------------CchHHHHHHHHH-H
Confidence 4999999999997765555 679999999999999976 531 1 113445566776 9
Q ss_pred hhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeee
Q 043137 76 GPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPA 155 (445)
Q Consensus 76 ~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~ 155 (445)
+|.|+|+||.+++.+|+.|. ... +|..+.+++..+|++|||+||||+.||.+|+|||+||| |..++++|+
T Consensus 63 ~p~liG~d~~~~~~i~~~l~-~~~----~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~vp~-- 132 (407)
T 2o56_A 63 SAIIIGMDPMNNEAIWEKML-KKT----FWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLG---GKSREKIRT-- 132 (407)
T ss_dssp HHHHTTSCTTCHHHHHHHHH-HSS----SGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSSEEE--
T ss_pred HHHhCCCChHHHHHHHHHHH-Hhc----cccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCCCCeeee--
Confidence 99999999999999999998 322 11112344567899999999999999999999999999 976666666
Q ss_pred EEe-ec-C-cccC--CCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhc------CCCCcccCCCCCCCC--C
Q 043137 156 FNV-IN-G-GSHA--GNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKY------GQDATNVGDEGGFAP--N 222 (445)
Q Consensus 156 ~~~-~~-g-g~~~--~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~------G~~~~~~~~~g~~~~--~ 222 (445)
|++ ++ | +.|+ ++..+.+ +..+++.+...++|+.+| .|. |.. ..++.+++.+ +
T Consensus 133 y~~~i~~g~~~~~~~~~~~~~~---------~~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~~~~~~~~ 197 (407)
T 2o56_A 133 YASQLQFGWGDGSDKDMLTEPE---------QYAQAALTAVSEGYDAIK----VDTVAMDRHGNW--NQQNLNGPLTDKI 197 (407)
T ss_dssp EEECGGGCCSTTCTTCCCCSHH---------HHHHHHHHHHHTTCSEEE----ECCSSBCTTSCB--SCSCCCSSCCHHH
T ss_pred eeeeccCCccccccccccCCHH---------HHHHHHHHHHHcCCCEEE----EcccccCCcCcc--ccCcccCCCchhH
Confidence 544 43 2 2221 0111122 224455555555666654 232 211 0111222221 1
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
++.+.++++++|++ +| +++.|++|+| ++||.+++++++ +.+++|++.||||
T Consensus 198 ~~~~~e~v~avR~a---~G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~ 248 (407)
T 2o56_A 198 LRLGYDRMAAIRDA---VG--PDVDIIAEMH-----------------------AFTDTTSAIQFG-RMIEELGIFYYEE 248 (407)
T ss_dssp HHHHHHHHHHHHHH---HC--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSCEEC
T ss_pred HHHHHHHHHHHHHh---cC--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEeC
Confidence 12234445444444 46 5899999993 578889999985 5689999999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|+++++++
T Consensus 249 P~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~- 324 (407)
T 2o56_A 249 PVMPLNPAQMKQVADKVN--IPLAAGERI-YWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHV- 324 (407)
T ss_dssp SSCSSSHHHHHHHHHHCC--SCEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC-
T ss_pred CCChhhHHHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC-
Confidence 999999999999999998 999999985 5699999999999999999999999999999999999999999987744
Q ss_pred CCCChhhH--HHHHHhhhc
Q 043137 383 SGETEDTF--IADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~~ 399 (445)
+. +.++. .+||+.+++
T Consensus 325 ~~-s~i~~aa~~hlaaa~~ 342 (407)
T 2o56_A 325 CG-GPISTAVALHMETAIP 342 (407)
T ss_dssp CS-CHHHHHHHHHHHHHCT
T ss_pred CC-CHHHHHHHHHHHHhCC
Confidence 44 76654 456665543
No 39
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=3.4e-48 Score=394.50 Aligned_cols=317 Identities=16% Similarity=0.181 Sum_probs=231.2
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhh-hh
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGP-AL 79 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p-~L 79 (445)
|.|||++|+++.+. +.+.++++|+|+||+|++|||++++. | |++..++...++ .++| .|
T Consensus 1 m~mkI~~i~~~~v~-~~~~~~v~V~v~td~G~~G~GE~~~~-----------------~-g~~~~~~~~~i~-~l~~~~l 60 (392)
T 2poz_A 1 MSLKITGVNIYLLK-SGRLHPVLVEISTDEGITGAGEAGIA-----------------Y-GVGGTAAAGMIK-DLSERFL 60 (392)
T ss_dssp --CCEEEEEEEECC-BTTBCCEEEEEEETTSCCEEEEESCS-----------------S-SSCHHHHHHHHH-HHHHHHT
T ss_pred CCCeEEEEEEEEEe-cCCccEEEEEEEECCCCEEEEeecCC-----------------c-CCchHHHHHHHH-HhhHhhh
Confidence 78999999999997 55555799999999999999977531 1 334556666776 5999 99
Q ss_pred cCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEee
Q 043137 80 AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVI 159 (445)
Q Consensus 80 iG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~ 159 (445)
+|+||.+++.+|+.|.+...++.+ .+.++.+|++|||+||||+.||.+|+|||+||| |..++++|+ |++
T Consensus 61 ~G~d~~~~~~i~~~l~~~~~~~~~-----~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~~~v~~--y~~- 129 (392)
T 2poz_A 61 IGKDPSRIEELWSTMYDHSFWAKN-----GGAIIFAGISAIEQALWDIKGKCLGVPVYELFG---GKIRDRVRA--YAN- 129 (392)
T ss_dssp TTCCTTCHHHHHHHHHHHSSTTTT-----CCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE--EEC-
T ss_pred cCCChhHHHHHHHHHHHhcccccC-----CchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCccCceEE--EEe-
Confidence 999999999999999843222111 234557899999999999999999999999999 976665555 543
Q ss_pred cCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCC------CCccChHHHHHHH
Q 043137 160 NGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFA------PNIQENKEGLELL 233 (445)
Q Consensus 160 ~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~------~~~~~~~~~l~~l 233 (445)
|+ ..+..+.+ +..+++.+...++|+.+| .|.|..... +..+++. .+.+.+.+.++++
T Consensus 130 --g~-~~~~~~~~---------~~~~~a~~~~~~Gf~~vK----ik~g~~~~g-~~~~~~~~gg~~~~~~~~~~e~v~av 192 (392)
T 2poz_A 130 --GW-YGAADTPD---------EFARAVERPLKEGYGALK----FYPLAQRVG-SALQHVTRRSMSAEAIELAYRRVKAV 192 (392)
T ss_dssp --SC-CTTCCSHH---------HHHHHTHHHHHTTCSEEE----ECCCCEEET-TEEECCBTTBCCHHHHHHHHHHHHHH
T ss_pred --cc-ccCCCCHH---------HHHHHHHHHHHcCCCEEE----Eeccccccc-ccccccccCCcchhhHHHHHHHHHHH
Confidence 21 10011122 223445554445565554 343311000 0000111 1222334455555
Q ss_pred HHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHH
Q 043137 234 NTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 234 ~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~ 313 (445)
|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||++++|+++++
T Consensus 193 r~a~---G--~d~~l~vD~n-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~~~~~ 243 (392)
T 2poz_A 193 RDAA---G--PEIELMVDLS-----------------------GGLTTDETIRFC-RKIGELDICFVEEPCDPFDNGALK 243 (392)
T ss_dssp HHHH---C--TTSEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECCSCTTCHHHHH
T ss_pred HHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHH
Confidence 5544 6 5899999993 578899999985 568999999999999999999999
Q ss_pred HHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh--HH
Q 043137 314 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT--FI 391 (445)
Q Consensus 314 ~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~--~~ 391 (445)
+|+++++ +||++||+. .++++++++++.+++|+++||++++||||++++++++|+++|+++++++ +. +.++ +.
T Consensus 244 ~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~-~~-s~i~~aa~ 318 (392)
T 2poz_A 244 VISEQIP--LPIAVGERV-YTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHV-CG-SSLIETAT 318 (392)
T ss_dssp HHHHHCS--SCEEECTTC-CHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCC-CS-SHHHHHHH
T ss_pred HHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCC-CC-CHHHHHHH
Confidence 9999998 999999986 5599999999999999999999999999999999999999999987744 55 7665 45
Q ss_pred HHHHhhhc
Q 043137 392 ADLSVGLA 399 (445)
Q Consensus 392 ~~la~a~~ 399 (445)
+||+.++.
T Consensus 319 ~hlaaa~~ 326 (392)
T 2poz_A 319 LQLEANIT 326 (392)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 56666543
No 40
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=9.8e-48 Score=390.76 Aligned_cols=310 Identities=18% Similarity=0.164 Sum_probs=223.2
Q ss_pred ceEEEEEEEEEEecC---CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHH------
Q 043137 2 AITITAVKARQIFDS---RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVN------ 72 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~---~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~------ 72 (445)
.||||+|+++.+..+ ..+..++|+|+||+|++|||++... .......++
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~----------------------~~~~~~~~~~~~~~~ 61 (394)
T 3mqt_A 4 GANIVSVEFIPVNVAATNWSENTVIVKVTDENGVYGLGEADGP----------------------PECMKAFSEIENEHK 61 (394)
T ss_dssp -CCEEEEEEEEEECC-----CEEEEEEEEETTSCEEEEEECSC----------------------HHHHHHHHTCCCCBT
T ss_pred CCeEeEEEEEEEecCCCCCCccEEEEEEEECCCCEEEEEECCc----------------------HHHHHHHHhcccchh
Confidence 489999999988643 2356799999999999999976431 111111222
Q ss_pred --HhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 73 --AIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 73 --~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+.++|.|+|+||.+++++|+.|++... | .|+++...+|+|||||||||+.||.+|+|||+||| |..+++
T Consensus 62 ~~~~l~p~liG~dp~~~e~~~~~l~~~~~-----~-~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~ 132 (394)
T 3mqt_A 62 WLNNIKEAVIGRDPLEFRANYNRMYDTTK-----W-IGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMG---GAQKAQ 132 (394)
T ss_dssp TBCCGGGGTTTSCTTCHHHHHHHHHHHTT-----T-TCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSS
T ss_pred hHHHHHHHhCCCChhHHHHHHHHHHHhhh-----h-hCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCCCCe
Confidence 248999999999999999999984321 1 12334446899999999999999999999999999 987788
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKK-KYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~-k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++. +++..... ..+.++. + ++..+++.+...++|+++| . |+|. . ..+.+.+.++
T Consensus 133 v~~y~--s~~~~~~~--~~~~~~~-i----~~~~~~a~~~~~~G~~~~K----~~k~g~-------~---~~~~~~d~~~ 189 (394)
T 3mqt_A 133 LTPYF--TLYPSVAA--DATLSEI-V----EAYKPLIAKAKERGAKAVK----VCIIPN-------D---KVSDKEIVAY 189 (394)
T ss_dssp BCCEE--ECCCCCCT--TCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCCC-------T---TSCHHHHHHH
T ss_pred EEEEE--EecCCCCC--Ccchhhh-H----HHHHHHHHHHHHcCCCEEE----ecccCC-------C---ccCHHHHHHH
Confidence 88744 32110100 0000000 0 0111223333333444433 3 3331 0 0122344555
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCcc-CHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKI-SGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~-t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
++++|+++ | +++.|++|+ |++| |.++++++ .+.++++++.|||||++++|
T Consensus 190 v~avR~a~---G--~d~~l~vDa-----------------------n~~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~~ 240 (394)
T 3mqt_A 190 LRELREVI---G--WDMDMMVDC-----------------------LYRWTDWQKARWT-FRQLEDIDLYFIEACLQHDD 240 (394)
T ss_dssp HHHHHHHH---C--SSSEEEEEC-----------------------TTCCSCHHHHHHH-HHHTGGGCCSEEESCSCTTC
T ss_pred HHHHHHHh---C--CCCeEEEEC-----------------------CCCCCCHHHHHHH-HHHHhhcCCeEEECCCCccc
Confidence 65555554 6 589999999 3678 89999987 56789999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|++ ++.+
T Consensus 241 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i 315 (394)
T 3mqt_A 241 LIGHQKLAAAIN--TRLCGAEMS-TTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM-PHNW-KTGI 315 (394)
T ss_dssp HHHHHHHHHHSS--SEEEECTTC-CHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC-CCCC-SCHH
T ss_pred HHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ccCC-CchH
Confidence 999999999998 999999985 6699999999999999999999999999999999999999999986 4544 8876
Q ss_pred hH--HHHHHhhhc
Q 043137 389 TF--IADLSVGLA 399 (445)
Q Consensus 389 ~~--~~~la~a~~ 399 (445)
+. .+||+++++
T Consensus 316 ~~aa~~hlaaa~p 328 (394)
T 3mqt_A 316 TAAAARHFGIVCH 328 (394)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCC
Confidence 54 556665554
No 41
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=7.3e-48 Score=394.69 Aligned_cols=312 Identities=15% Similarity=0.219 Sum_probs=228.4
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
.||||+|++..+ ..+++.++|+|+||+|++|||++... ++ ...+...|++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~~-------------------g~-~~~~~~~l~~~l~p~LiG 79 (426)
T 4e4f_A 22 SMKIVSAEVFVT--CPGRNFVTLKITTDSGLTGLGDATLN-------------------GR-ELPVASYLNDHVCPQLIG 79 (426)
T ss_dssp CCBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCCT-------------------TC-HHHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEecccC-------------------CC-cHHHHHHHHHHHHHHHcC
Confidence 399999998765 33567899999999999999976431 11 123455678889999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++++|+.|++.. + |+++.+..+|+|||||||||+.||.+|+|||+||| |+.++++|+|.++ .+
T Consensus 80 ~dp~~ie~i~~~l~~~~-----~--~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~~~--~~ 147 (426)
T 4e4f_A 80 RDAHQIEDIWQYFYKGA-----Y--WRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLG---GASRTGVMVYCHT--TG 147 (426)
T ss_dssp SBTTCHHHHHHHHHHHT-----S--SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEEEEEE--CC
T ss_pred CChhhHHHHHHHHHhhc-----c--ccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceeEeEeC--CC
Confidence 99999999999998421 1 23344556899999999999999999999999999 9888888886542 11
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcc--c----CCCCCCCCC-------------
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATN--V----GDEGGFAPN------------- 222 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~--~----~~~g~~~~~------------- 222 (445)
. +. ++..+++.+...++|+++| .|+|..... . +..-.+.+.
T Consensus 148 ~-------~~---------~~~~~~~~~~~~~Gf~~iK----ikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (426)
T 4e4f_A 148 H-------SI---------DEVLDDYAKHRDQGFKAIR----VQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWST 207 (426)
T ss_dssp S-------SH---------HHHHHHHHHHHHTTCSEEE----ECC-------------------CCSEESSSCCEEEECH
T ss_pred C-------CH---------HHHHHHHHHHHHcCCCEEE----EeccCCccccccccccccccccccccccccccccccch
Confidence 1 11 2223444444445676654 454421100 0 000000110
Q ss_pred ---ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeee
Q 043137 223 ---IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVS 299 (445)
Q Consensus 223 ---~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~ 299 (445)
++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|
T Consensus 208 ~~~~~~~~e~v~avR~a~---G--~d~~L~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~ 258 (426)
T 4e4f_A 208 EKYLDFTPKLFEAVRDKF---G--FNEHLLHDM-----------------------HHRLTPIEAARF-GKSVEDYRLFW 258 (426)
T ss_dssp HHHHHHHHHHHHHHHHHH---T--TSSEEEEEC-----------------------TTCSCHHHHHHH-HHHTGGGCCSE
T ss_pred hHHHHHHHHHHHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCCE
Confidence 000124455555544 5 589999999 367899999987 56789999999
Q ss_pred EECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEe
Q 043137 300 IEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMA 379 (445)
Q Consensus 300 iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~ 379 (445)
||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++.
T Consensus 259 iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~ 335 (426)
T 4e4f_A 259 MEDPTPAENQACFRLIRQHTV--TPIAVGEVF-NSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGS 335 (426)
T ss_dssp EECCSCCSSGGGGHHHHTTCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEE
T ss_pred EECCCChHHHHHHHHHHhcCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999998 999999985 56999999999999999999999999999999999999999999754
Q ss_pred cCCCCCChhh--HHHHHHhhhc
Q 043137 380 SHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 380 ~~~~~et~~~--~~~~la~a~~ 399 (445)
++.+.++.++ +++||+.++.
T Consensus 336 h~~~~~s~i~~aa~~hlaaa~p 357 (426)
T 4e4f_A 336 HGPSDLSPICMAAALHFDLWVP 357 (426)
T ss_dssp CCCTTSCHHHHHHHHHHHHHCT
T ss_pred eCCCCccHHHHHHHHHHHHhCC
Confidence 3334567655 4556665543
No 42
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=4.1e-48 Score=390.83 Aligned_cols=304 Identities=17% Similarity=0.210 Sum_probs=231.7
Q ss_pred eEEEEEEEEEEecC--------C----CCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------R----GNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~----g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ . .+..++|+|+ |+|++|||++.... +++|++++...+.+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLVGVGEGGSVG-------------GPVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSCBCCEECCCBT-------------TBTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCcEEEEccccCC-------------CCCCCCCCHHHHHHH
Confidence 89999999887432 1 1356899999 99999999654211 124677778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
|++.++|.|+|+||.+++++|+.|++.+. + ..+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 67 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~ 131 (370)
T 1chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVT----------G--NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSA 131 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHHHCS----------S--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHHhc----------C--cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCc
Confidence 88889999999999999999999984332 1 15799999999999999999999999999 987888
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++. +++.+. . .+.++++.+... ++|+++| .|+|. .+.+.+.++
T Consensus 132 v~~~~--t~~~~~-------~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~ 177 (370)
T 1chr_A 132 IPIAW--TLASGD-------T---------KRDLDSAVEMIERRRHNRFK----VKLGF------------RSPQDDLIH 177 (370)
T ss_dssp EEBEE--EECSSS-------H---------HHHHHHHHHHHHTTCCCEEE----EECSS------------SCSHHHHHH
T ss_pred eeEEE--EecCCC-------c---------HHHHHHHHHHHHHCCCCEEE----EecCC------------CCHHHHHHH
Confidence 88842 222220 0 122334433332 2343332 34331 122334555
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 178 v~avR~~~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~~ 228 (370)
T 1chr_A 178 MEALSNSL---G--SKAYLRVDV-----------------------NQAWDEQVASVY-IPELEALGVELIEQPVGRENT 228 (370)
T ss_dssp HHHHHHHS---S--TTCCEEEEC-----------------------TTCCCTTHHHHH-THHHHTTTEEEEECCSCTTCH
T ss_pred HHHHHHhc---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccH
Confidence 55555443 5 479999999 367888899987 567899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.++
T Consensus 229 ~~~~~l~~~~~--iPia~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~ 304 (370)
T 1chr_A 229 QALRRLSDNNR--VAIMADESL-STLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT-MLDSTIG 304 (370)
T ss_dssp HHHHHHHHHSC--SEEEESSSC-CSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC-SCCTTHH
T ss_pred HHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC-CCccHHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999998776 5677776
Q ss_pred HHHHHHhhhcCCc
Q 043137 390 FIADLSVGLATGQ 402 (445)
Q Consensus 390 ~~~~la~a~~~~~ 402 (445)
.++.++++...+.
T Consensus 305 ~aa~~hlaaa~~~ 317 (370)
T 1chr_A 305 TSVALQLYSTVPS 317 (370)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHHhCCC
Confidence 5555544443443
No 43
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=1.4e-47 Score=388.46 Aligned_cols=302 Identities=16% Similarity=0.200 Sum_probs=230.2
Q ss_pred eEEEEEEEEEEecC--------CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||++...+ .|+ ++...+.+
T Consensus 8 mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~-e~~~~~~~ 71 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWA---------------VFT-GTPEASYA 71 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCT---------------TTT-CCHHHHHH
T ss_pred cEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCEEEEeeccCC---------------CcC-CCHHHHHH
Confidence 69999999888532 22 245899999999999999654321 022 44667777
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.|++.++|.|+|+||.+++++|+.|++.+. + ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 72 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----------~--~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~r~ 136 (385)
T 3i6e_A 72 ALDRYLRPLVIGRRVGDRVAIMDEAARAVA----------H--CTEAKAALDSALLDLAGRISNLPVWALLG---GKCRD 136 (385)
T ss_dssp HHHHTTHHHHTTCBGGGHHHHHHHHHHHSS----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCS
T ss_pred HHHHHHHHHHCCCCccCHHHHHHHHHHHhc----------C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---cccCC
Confidence 788889999999999999999999984321 1 25799999999999999999999999999 98778
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|++. +++.+ + ++..++++.+...++|+++| .|+|. .+.+.+.++
T Consensus 137 ~v~~~~--t~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~ 182 (385)
T 3i6e_A 137 TIPLSC--SIANP-------D---------FDADIALMERLRADGVGLIK----LKTGF------------RDHAFDIMR 182 (385)
T ss_dssp EEEBEE--EECCS-------S---------HHHHHHHHHHHHHHTCCEEE----EECSS------------SCHHHHHHH
T ss_pred ceEEEE--EcCCC-------C---------HHHHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHH
Confidence 888743 22211 1 12223444444445565543 44431 122334455
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 183 v~avR~a~------~~~~l~vDa-----------------------n~~~~~~~A~~~-~~~L~~~~i~~iEqP~~~~d~ 232 (385)
T 3i6e_A 183 LELIARDF------PEFRVRVDY-----------------------NQGLEIDEAVPR-VLDVAQFQPDFIEQPVRAHHF 232 (385)
T ss_dssp HHHHHHHC------TTSEEEEEC-----------------------TTCCCGGGHHHH-HHHHHTTCCSCEECCSCTTCH
T ss_pred HHHHHHhC------CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccH
Confidence 55444443 589999999 367888899987 456899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.++
T Consensus 233 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~ 308 (385)
T 3i6e_A 233 ELMARLRGLTD--VPLLADESV-YGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGD-MFEAGLA 308 (385)
T ss_dssp HHHHHHHTTCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHH
T ss_pred HHHHHHHHhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCC-CCccHHH
Confidence 99999999988 999999985 6799999999999999999999999999999999999999999997766 5788776
Q ss_pred HHHHHHhhhcCCcc
Q 043137 390 FIADLSVGLATGQI 403 (445)
Q Consensus 390 ~~~~la~a~~~~~~ 403 (445)
..+.++++...+++
T Consensus 309 ~aa~~hlaaa~~~~ 322 (385)
T 3i6e_A 309 HLAGTHMIAATPEI 322 (385)
T ss_dssp HHHHHHHHHTCTTE
T ss_pred HHHHHHHHHhCCCC
Confidence 55554444334443
No 44
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=1.7e-47 Score=387.53 Aligned_cols=301 Identities=14% Similarity=0.205 Sum_probs=219.9
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAG 81 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG 81 (445)
.||||+|++... ++.++|+|+||+|++|||+++. |. .......+++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~-----~~~~~V~v~Td~G~~G~GE~~~------------------~~---~~~~~~~i~~~l~p~LiG 75 (388)
T 3tcs_A 22 SMKLKAIETFTN-----DAVGFVRVTTQDGAQGWGQVST------------------YH---ADITCTVLHRQVAPWMLG 75 (388)
T ss_dssp -CBEEEEEEEEC-----SSCEEEEEEETTSCEEEEECCS------------------SS---HHHHHHHHHHHTHHHHTT
T ss_pred ccEEEEEEEEEe-----CCeEEEEEEECCCCEEEEeccC------------------Cc---cHHHHHHHHHHHHHHhCC
Confidence 389999997653 3468999999999999997643 11 123344577889999999
Q ss_pred CCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecC
Q 043137 82 KDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVING 161 (445)
Q Consensus 82 ~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~g 161 (445)
+||.+++++|+.|++..... .+....+|+|||||||||+.||.+|+|||+||| |.. +++|+|..+. +
T Consensus 76 ~d~~~~e~l~~~~~~~~~~~-------~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---g~~-~~v~~y~s~~--~ 142 (388)
T 3tcs_A 76 QDITDLDDLLDIVTEREHKF-------PGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLG---GTP-GLIRAYASSM--K 142 (388)
T ss_dssp SBCTTHHHHHHHHHHHTTTC-------CBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-EEEEEEEECC--C
T ss_pred CCcccHHHHHHHHHHhhhcc-------CCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhC---CCC-CceEEEEecC--c
Confidence 99999999999998321110 123335699999999999999999999999999 864 5676643211 1
Q ss_pred cccCCCCcccceeeeccCChhcHHHHHHHH-HHHHHHHHHHHHhhcCCCCcccCCCCCCCC--CccChHHHHHHHHHHHH
Q 043137 162 GSHAGNKLAMQEFMILPVGASCFKEAMKMG-VEVYHHLKAVIKKKYGQDATNVGDEGGFAP--NIQENKEGLELLNTAIA 238 (445)
Q Consensus 162 g~~~~~~~~~~e~~~~p~~~~~~~~a~~~~-~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~--~~~~~~~~l~~l~~av~ 238 (445)
. ..+. .+..+++.+.. .++|+++| .|+|.. ..... ..+.+.+.++++|+++
T Consensus 143 ~-----~~~~---------~~~~~~~~~~~~~~Gf~~~K----~KvG~~-------~~~d~~~~~~~~~~~v~avReav- 196 (388)
T 3tcs_A 143 R-----DITP---------RDEAERLKRLRDTQGFTAFK----VRAGAE-------VGRNRDEWPGRTEEIIPTMRREL- 196 (388)
T ss_dssp S-----SSCH---------HHHHHHHHHHHHHHCCCEEE----EECSCT-------TCTTCCSSTTHHHHHHHHHHHHH-
T ss_pred C-----CCCh---------HHHHHHHHHHHHhcCCCEEE----EccCCC-------cccccccchhHHHHHHHHHHHHh-
Confidence 0 0111 11223332221 33555543 454421 11000 1122345666666655
Q ss_pred HhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHH
Q 043137 239 KAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSE 318 (445)
Q Consensus 239 ~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~ 318 (445)
| +++.|++|+ |+.||.++++++ .+.++++++.|||||++++|++++++|+++
T Consensus 197 --G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~ 248 (388)
T 3tcs_A 197 --G--DDVDLLIDA-----------------------NSCYTPDRAIEV-GHMLQDHGFCHFEEPCPYWELAQTKQVTDA 248 (388)
T ss_dssp --C--SSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCEEECCSCTTCHHHHHHHHHH
T ss_pred --C--CCCeEEEeC-----------------------CCCcCHHHHHHH-HHHHhhcCCeEEECCCCccCHHHHHHHHHh
Confidence 6 589999999 367899999987 566899999999999999999999999999
Q ss_pred hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC-hhhHHHHHHhh
Q 043137 319 VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET-EDTFIADLSVG 397 (445)
Q Consensus 319 ~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et-~~~~~~~la~a 397 (445)
++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |++.++ ...+.+||+.+
T Consensus 249 ~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~~-h~~~~~~~~~a~~hl~aa 324 (388)
T 3tcs_A 249 LD--IDVTGGEQD-CDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVTP-HCANWSLVTLFTMHLLRA 324 (388)
T ss_dssp CS--SCEEECTTC-CCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBCC-CCCSTTTHHHHHHHHHTT
T ss_pred cC--CCEEcCCcc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCCCcHHHHHHHHHHHHh
Confidence 98 999999985 67999999999999999999999999999999999999999999855 544443 22345576666
Q ss_pred hc
Q 043137 398 LA 399 (445)
Q Consensus 398 ~~ 399 (445)
+.
T Consensus 325 ~p 326 (388)
T 3tcs_A 325 IP 326 (388)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 45
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=8.1e-48 Score=389.45 Aligned_cols=301 Identities=15% Similarity=0.159 Sum_probs=228.5
Q ss_pred eEEEEEEEEEEec--------CCC----Cc-eEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NP-TVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~-~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
|||++|+++.+.. +.+ +. .++|+|+||+|++|||++...+. |+ ++...+.+
T Consensus 6 ~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~---------------~~-e~~~~~~~ 69 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEV---------------FT-GTPEAAFS 69 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC---------------------CHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCEEEEecccCCC---------------cC-CCHHHHHH
Confidence 7999999988843 222 35 78999999999999996543210 21 34567777
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.|++.++|.|+|+||.+++.+|+.|++.+. + ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 70 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~----------~--~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~r~ 134 (377)
T 3my9_A 70 ALDIYLRPLILGAPIKRVRELMARMDKMLV----------G--HGEAKAAVEMALLDILGKATGLSVADLLG---GRVRD 134 (377)
T ss_dssp HHHTTTHHHHTTCBTTCHHHHHHHHHHHSC----------S--CHHHHHHHHHHHHHHHHHHHTCBTTGGGT---CCSCS
T ss_pred HHHHHHHHHhCCCCcCCHHHHHHHHHHHhc----------C--chhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCC
Confidence 787779999999999999999999984321 1 25799999999999999999999999999 98788
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|++.. ++.+ + ++..++++.+...++|+++| .|+|. .+.+.+.++
T Consensus 135 ~v~~~~t--~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~ 180 (377)
T 3my9_A 135 RIPLSFS--IADP-------D---------FDADLERMRAMVPAGHTVFK----MKTGV------------KPHAEELRI 180 (377)
T ss_dssp EEEBCEE--ECCS-------S---------HHHHHHHHHHHTTTTCCEEE----EECSS------------SCHHHHHHH
T ss_pred eEEEEEe--cCCC-------C---------HHHHHHHHHHHHHcCCCEEE----EccCC------------CcHHHHHHH
Confidence 8887532 2211 1 12223444444334555443 34331 122344566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+| ++||.++++++ .+.++++++.|||||++++|+
T Consensus 181 v~avR~~~---g--~~~~l~vDan-----------------------~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~d~ 231 (377)
T 3my9_A 181 LETMRGEF---G--ERIDLRLDFN-----------------------QALTPFGAMKI-LRDVDAFRPTFIEQPVPRRHL 231 (377)
T ss_dssp HHHHHHHH---G--GGSEEEEECT-----------------------TCCCTTTHHHH-HHHHHTTCCSCEECCSCTTCH
T ss_pred HHHHHHHh---C--CCCeEEEeCC-----------------------CCcCHHHHHHH-HHHHhhcCCCEEECCCCccCH
Confidence 66666655 5 5899999993 57888899987 567899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.++
T Consensus 232 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i~ 307 (377)
T 3my9_A 232 DAMAGFAAALD--TPILADESC-FDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGT-LWEGGIA 307 (377)
T ss_dssp HHHHHHHHHCS--SCEEESTTC-SSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCE-ECCSHHH
T ss_pred HHHHHHHHhCC--CCEEECCcc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCC-CCCcHHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999997766 5788776
Q ss_pred HHHHHHhhhcCC
Q 043137 390 FIADLSVGLATG 401 (445)
Q Consensus 390 ~~~~la~a~~~~ 401 (445)
..+.++++...+
T Consensus 308 ~aa~~hlaaa~~ 319 (377)
T 3my9_A 308 LAAGTQLIAATP 319 (377)
T ss_dssp HHHHHHHHHTCT
T ss_pred HHHHHHHHHhCC
Confidence 555444433333
No 46
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.2e-47 Score=389.50 Aligned_cols=296 Identities=16% Similarity=0.187 Sum_probs=233.3
Q ss_pred CceEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
+.|||++|+++.+. .+.+ +++++|+|+||+|++|||+++..+ .++|+++++.++.
T Consensus 18 ~~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~ 84 (386)
T 1wue_A 18 SHMNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFE-------------QPDYVQETLVTER 84 (386)
T ss_dssp CCCCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCS-------------STTSSSCCHHHHH
T ss_pred CcCEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCEEEEEeecCC-------------CCcccCCcHHHHH
Confidence 35899999998773 2222 357899999999999999765421 1237778888888
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCc
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN 148 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~ 148 (445)
..+++.++|.|+|+|+.+++.+|+.|. .++ + +.+|++|||+||||+.||.+|+|||+||| | .+
T Consensus 85 ~~i~~~l~p~l~G~d~~~~~~l~~~l~-~~~----------g--~~~A~~aid~AlwDl~~k~~g~Pl~~llG---g-~~ 147 (386)
T 1wue_A 85 FIIQQHLIPLLLTEAIEQPQEVSTIFE-EVK----------G--HWMGKAALETAIWDLYAKRQQKSLTEFFG---P-TR 147 (386)
T ss_dssp HHHHHTHHHHHTTSCCCSTHHHHHHGG-GSC----------S--CHHHHHHHHHHHHHHHHHHTTSBGGGGSS---S-CC
T ss_pred HHHHHHHHHHHcCCCccCHHHHHHHHH-Hcc----------C--chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CC
Confidence 889888999999999999999998887 432 1 15799999999999999999999999999 8 56
Q ss_pred ceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH
Q 043137 149 LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 149 ~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
+++|+|+. ++.+ .+. ++.++++.+...++|+++| .|+| + +.+.+
T Consensus 148 ~~v~~~~~--~g~~------~~~---------~~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~ 191 (386)
T 1wue_A 148 RKIPVGIS--LGIQ------EDL---------PQLLKQVQLAVEKGYQRVK----LKIR-------------P--GYDVE 191 (386)
T ss_dssp SEEECCEE--ECCC------SCH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHH
T ss_pred CeeEeeEE--ecCC------CCH---------HHHHHHHHHHHHhhhheEE----EeeC-------------c--HHHHH
Confidence 78888653 2111 011 2223455555555565544 3322 1 22466
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
+++++|+++ +++.|++|+| +.||.+++ ++ .+.+++|++.|||||++++|
T Consensus 192 ~v~avr~a~------~~~~l~vDaN-----------------------~~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d 240 (386)
T 1wue_A 192 PVALIRQHF------PNLPLMVDAN-----------------------SAYTLADL-PQ-LQRLDHYQLAMIEQPFAADD 240 (386)
T ss_dssp HHHHHHHHC------TTSCEEEECT-----------------------TCCCGGGH-HH-HHGGGGSCCSCEECCSCTTC
T ss_pred HHHHHHHhC------CCCeEEEeCC-----------------------CCCCHHHH-HH-HHHHHhCCCeEEeCCCCccc
Confidence 676666553 5799999993 56788888 76 56789999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
+++|++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.+
T Consensus 241 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i 316 (386)
T 1wue_A 241 FLDHAQLQRELK--TRICLDENI-RSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGG-MFESGV 316 (386)
T ss_dssp SHHHHHHHTTCS--SCEEECTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHH
T ss_pred HHHHHHHHHhcC--CCEEeCCcc-CCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECC-CcccHH
Confidence 999999999988 999999985 5699999999999999999999999999999999999999999998877 468887
Q ss_pred hHHHHHHhh
Q 043137 389 TFIADLSVG 397 (445)
Q Consensus 389 ~~~~~la~a 397 (445)
+.+++++++
T Consensus 317 ~~aa~~hla 325 (386)
T 1wue_A 317 GRALNLQFA 325 (386)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766666555
No 47
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=1.4e-47 Score=388.44 Aligned_cols=302 Identities=18% Similarity=0.261 Sum_probs=225.9
Q ss_pred CceEEEEEEEEEEecC---------CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIFDS---------RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~---------~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|.|||++|+++.+..+ .+ +..++|+|+||+|++|||++.... +.|++++...
T Consensus 1 m~MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~~~~~e~~~~ 66 (386)
T 3fv9_G 1 MSLKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFG--------------STYIAAHAGG 66 (386)
T ss_dssp --CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCST--------------TSSSSCCHHH
T ss_pred CCCEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCEEEEecccCC--------------CccCcccHHH
Confidence 8999999999887421 12 245899999999999999653210 1255666677
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+.+.++ .++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 67 ~~~~l~-~l~~~l~G~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~ 130 (386)
T 3fv9_G 67 TRAALE-LLAPAILGMDPRQHDRIWDRMRDTLK----------G--HRDARAALDIACWDIAAQAAGLPLCDMTG---GR 130 (386)
T ss_dssp HHHHHH-HHHHHHTTSCTTCHHHHHHHHHHHCS----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC
T ss_pred HHHHHH-HHHHHhCCCCcCCHHHHHHHHHHHhc----------C--cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CC
Confidence 777775 59999999999999999999984332 1 25799999999999999999999999999 98
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
.++++|++. +++.+ + ++...+++.+...++|+++| .|+|.. .. .. ..
T Consensus 131 ~~~~v~~y~--s~~~~-------~---------~e~~~~~a~~~~~~G~~~~K----~Kvg~~-------~~-~~---~~ 177 (386)
T 3fv9_G 131 VAGPVPVIS--SIGGD-------T---------PEAMRAKVARHRAQGFKGHS----IKIGAS-------EA-EG---GP 177 (386)
T ss_dssp CSSCBCEEE--EECSC-------C---------HHHHHHHHHHHHHTTCCEEE----EECCCC-------TT-TT---HH
T ss_pred CCCceeeeE--ecCCC-------C---------HHHHHHHHHHHHHCCCCEEE----EeccCC-------CC-CC---CH
Confidence 777888754 33211 1 12223444444444565543 454421 00 01 12
Q ss_pred HHHHHHHHHHHHH-hCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhh-ccCCeeeEECCC
Q 043137 227 KEGLELLNTAIAK-AGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFI-SDYPIVSIEDPF 304 (445)
Q Consensus 227 ~~~l~~l~~av~~-~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l-~~~~i~~iEdP~ 304 (445)
.+.++.+ +++|+ +| +++.|++|+ |+.||.+++++++ +.+ +++++ |||||+
T Consensus 178 ~~d~~~v-~avR~a~G--~~~~L~vDa-----------------------N~~~~~~~A~~~~-~~l~~~~~i-~iEeP~ 229 (386)
T 3fv9_G 178 ALDAERI-TACLADRQ--PGEWYLADA-----------------------NNGLTVEHALRML-SLLPPGLDI-VLEAPC 229 (386)
T ss_dssp HHHHHHH-HHHTTTCC--TTCEEEEEC-----------------------TTCCCHHHHHHHH-HHSCSSCCC-EEECCC
T ss_pred HHHHHHH-HHHHHHcC--CCCeEEEEC-----------------------CCCCCHHHHHHHH-HHhhccCCc-EEecCC
Confidence 3344444 34554 45 589999999 3678999999874 567 78999 999999
Q ss_pred CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 043137 305 DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSG 384 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~ 384 (445)
+ |++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++|+ .
T Consensus 230 ~--~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~ 303 (386)
T 3fv9_G 230 A--SWAETKSLRARCA--LPLLLDELI-QTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDT-V 303 (386)
T ss_dssp S--SHHHHHHHHTTCC--SCEEESTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECS-S
T ss_pred C--CHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCCC-C
Confidence 8 8999999999998 999999985 67999999999999999999999999999999999999999999998884 6
Q ss_pred CChhhH--HHHHHhhhc
Q 043137 385 ETEDTF--IADLSVGLA 399 (445)
Q Consensus 385 et~~~~--~~~la~a~~ 399 (445)
|+.++. .+||+.++.
T Consensus 304 es~i~~aa~~hlaaa~~ 320 (386)
T 3fv9_G 304 GSQISFAAILHLAQSTP 320 (386)
T ss_dssp CCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 787654 455555543
No 48
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=1e-47 Score=390.45 Aligned_cols=311 Identities=18% Similarity=0.154 Sum_probs=224.7
Q ss_pred CceEEEEEEEEEEecC---CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHH-----
Q 043137 1 MAITITAVKARQIFDS---RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVN----- 72 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~---~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~----- 72 (445)
+.||||+|+++.+..+ ..+..++|+|+||+|++|||++...+ ......++
T Consensus 8 ~~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------------~~~~~~~~~~~~~ 65 (394)
T 3mkc_A 8 AVAPIKSIEFIPVNYQASNWSQNTVVVKVTDENGVYGLGEADGSP----------------------DAILAYANIETEH 65 (394)
T ss_dssp TCCCEEEEEEEEEEEC----CEEEEEEEEEETTSCEEEEEECSCH----------------------HHHHHHHTCCCCB
T ss_pred CCCeEEEEEEEEEecCCCCCCccEEEEEEEECCCCeEEEEecCcH----------------------HHHHHHHhcccch
Confidence 4589999999988643 23467999999999999999764311 11111222
Q ss_pred ---HhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 73 ---AIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 73 ---~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
+.++|.|+|+||.+++++|+.|++... | .|+++...+|+||||+||||+.||.+|+|||+||| |..++
T Consensus 66 ~~~~~l~p~liG~dp~~~e~~~~~l~~~~~-----~-~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~ 136 (394)
T 3mkc_A 66 KWLTNITEKAIGRLPIEINAIWDAMYDATQ-----W-QGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLG---GTNKD 136 (394)
T ss_dssp TTBCCTTTTTTTSCTTCHHHHHHHHHHHTH-----H-HHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCS
T ss_pred hhHHHHHHHhCCCChhHHHHHHHHHHHhhh-----h-cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCC
Confidence 248999999999999999999984321 1 12234446899999999999999999999999999 98878
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHh-hcCCCCcccCCCCCCCCCccChHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKK-KYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~-k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
++|++. +++.... ...+.++. + ++..+++.+...++|+++| . |+|. . ..+.+.+.+
T Consensus 137 ~v~~y~--s~~~~~~--~~~~~~~~-~----~~~~~~a~~~~~~G~~~~K----~~k~g~-------~---~~~~~~d~e 193 (394)
T 3mkc_A 137 KVHPYL--TLYPAIP--VDASLDVA-I----KGYAPLLEKAKAHNIRAVK----VCVPIK-------A---DWSTKEVAY 193 (394)
T ss_dssp EECCEE--ECCCSCC---CCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCTT-------C---CCCHHHHHH
T ss_pred eeEEEE--ecCCcCC--CCcchhhh-H----HHHHHHHHHHHHcCCCEEE----eCccCC-------C---ccCHHHHHH
Confidence 887743 3211010 00000000 0 0112233333333454443 3 3331 0 012334455
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCcc-CHHHHHHHHHHhhccCCeeeEECCCCcC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKI-SGDALKDLYKSFISDYPIVSIEDPFDQD 307 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~-t~~~ai~~~~~~l~~~~i~~iEdP~~~~ 307 (445)
+++++|+++ | +++.|++|+ |++| |.++++++ .+.++++++.|||||++++
T Consensus 194 ~v~avR~a~---G--~d~~l~vDa-----------------------N~~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~ 244 (394)
T 3mkc_A 194 YLRELRGIL---G--HDTDMMVDY-----------------------LYRFTDWYEVARL-LNSIEDLELYFAEATLQHD 244 (394)
T ss_dssp HHHHHHHHH---C--SSSEEEEEC-----------------------TTCCCCHHHHHHH-HHHTGGGCCSEEESCSCTT
T ss_pred HHHHHHHHh---C--CCCeEEEeC-----------------------CCCCCCHHHHHHH-HHHhhhcCCeEEECCCCch
Confidence 666555554 5 589999999 3678 89999988 5668999999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|++++ .|++ ++.
T Consensus 245 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~ 319 (394)
T 3mkc_A 245 DLSGHAKLVENTR--SRICGAEMS-TTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM-PHNW-KTG 319 (394)
T ss_dssp CHHHHHHHHHHCS--SCBEECTTC-CHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCC-SCH
T ss_pred hHHHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcH
Confidence 9999999999998 999999985 5699999999999999999999999999999999999999999986 4544 887
Q ss_pred hhH--HHHHHhhhc
Q 043137 388 DTF--IADLSVGLA 399 (445)
Q Consensus 388 ~~~--~~~la~a~~ 399 (445)
++. .+||+++++
T Consensus 320 i~~aa~~hlaaa~p 333 (394)
T 3mkc_A 320 ITSAAAIHYQFAVG 333 (394)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC
Confidence 664 556666554
No 49
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=1.8e-47 Score=383.82 Aligned_cols=301 Identities=18% Similarity=0.244 Sum_probs=231.7
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ ++.++|+|+||+|++|||++...+ .|++++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~ge~~~~~~~~ 65 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGI---------------FITGETLAGTLET 65 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCT---------------TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCEEEEeecCCC---------------CcCCCCHHHHHHH
Confidence 8999999987742 222 356899999999999999654311 2445666777777
Q ss_pred HHHhHh---hhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC
Q 043137 71 VNAIIG---PALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK 147 (445)
Q Consensus 71 i~~~l~---p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~ 147 (445)
|+ .++ |.|+|+||.+++.+|+.|. . .+ .+|++|||+||||+.||.+|+|||+||| | .
T Consensus 66 i~-~l~~~~p~l~G~d~~~~~~~~~~l~-~----~~----------~~A~~aid~AlwDl~gk~~g~Pl~~llG---g-~ 125 (354)
T 3jva_A 66 IE-LFGQAIIGLNPFNIEKIHEVMDKIS-A----FA----------PAAKAAIDIACYDLMGQKAQLPLYQLLG---G-Y 125 (354)
T ss_dssp HH-HHHTTSTTCCTTCHHHHHHHHHHHC-S----SC----------HHHHHHHHHHHHHHHHHHHTSBHHHHTT---C-S
T ss_pred HH-HHhhcCccccCCCcccHHHHHHHHh-c----cc----------HHHHHHHHHHHHHHHHHHcCCcHHHHhh---c-c
Confidence 77 789 9999999999999987775 1 11 4799999999999999999999999999 8 5
Q ss_pred cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChH
Q 043137 148 NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENK 227 (445)
Q Consensus 148 ~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 227 (445)
++++|++.. ++.+ .++...+++.+...++|+++| .|+|. +.+.+.
T Consensus 126 ~~~v~~~~~--~~~~----------------~~~~~~~~a~~~~~~G~~~~K----~K~g~-------------~~~~d~ 170 (354)
T 3jva_A 126 DNQVITDIT--LGID----------------EPNVMAQKAVEKVKLGFDTLK----IKVGT-------------GIEADI 170 (354)
T ss_dssp CSEEECCEE--ECSC----------------CHHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHH
T ss_pred CCeeeeeEE--eCCC----------------CHHHHHHHHHHHHHhCCCeEE----EEeCC-------------CHHHHH
Confidence 677876432 2111 112234455554445565543 44431 113345
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcC
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~ 307 (445)
+.++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++
T Consensus 171 ~~v~avR~a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~L~~~~i~~iEqP~~~~ 221 (354)
T 3jva_A 171 ARVKAIREAV---G--FDIKLRLDA-----------------------NQAWTPKDAVKA-IQALADYQIELVEQPVKRR 221 (354)
T ss_dssp HHHHHHHHHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCEEEEECCSCTT
T ss_pred HHHHHHHHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCChh
Confidence 5666555554 5 589999999 367899999988 4568999999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+ ++++++++++++.+++|++|+|++++||+|++++++++|+++|++++++|+.+|+.
T Consensus 222 d~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es~ 298 (354)
T 3jva_A 222 DLEGLKYVTSQVN--TTIMADES-CFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETT 298 (354)
T ss_dssp CHHHHHHHHHHCS--SEEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCH
T ss_pred hHHHHHHHHHhCC--CCEEEcCC-cCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCCcccH
Confidence 9999999999998 99999998 47799999999999999999999999999999999999999999999988655898
Q ss_pred hhHHHHHHhhhcCCcccc
Q 043137 388 DTFIADLSVGLATGQIKT 405 (445)
Q Consensus 388 ~~~~~~la~a~~~~~~~~ 405 (445)
++..+.++++...+.+..
T Consensus 299 i~~~a~~hlaaa~~~~~~ 316 (354)
T 3jva_A 299 IGITAAAHLAAAQKNITR 316 (354)
T ss_dssp HHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHHhcCCCCCc
Confidence 776555555544444433
No 50
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=1.3e-47 Score=390.45 Aligned_cols=301 Identities=16% Similarity=0.207 Sum_probs=221.6
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGK 82 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 82 (445)
||||+|+++.+ ..+.++|+|+||+|++|+|++... | +...+...++ .++|.|+|+
T Consensus 2 MkIt~i~~~~~----~~~~~~V~v~td~G~~G~GE~~~~---g-----------------~~~~~~~~i~-~l~p~liG~ 56 (405)
T 3rr1_A 2 VKITRLTTYRL----PPRWMFLKVETDEGVTGWGEPVIE---G-----------------RARTVEAAVH-ELSDYLIGQ 56 (405)
T ss_dssp CCEEEEEEEEE----TTTEEEEEEEETTSCEEEECCCCT---T-----------------CHHHHHHHHH-HHGGGTTTS
T ss_pred CeEEEEEEEEE----CCCEEEEEEEECCCCEEEEeCCCC---C-----------------CHHHHHHHHH-HHHHHHCCC
Confidence 89999999888 245799999999999999976531 1 0233344454 499999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCc
Q 043137 83 DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGG 162 (445)
Q Consensus 83 d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg 162 (445)
||.+++++|+.|++ .. + |+.+.+..+|+|||||||||+.||.+|+|||+||| |+.++++|++. .+++.
T Consensus 57 dp~~~e~~~~~l~~-~~----~--~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~~~~~ 124 (405)
T 3rr1_A 57 DPSRINDLWQTMYR-AG----F--YRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLG---GLVRDKMRTYS--WVGGD 124 (405)
T ss_dssp CTTCHHHHHHHHHH-TS----S--SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEEEE--ECCCS
T ss_pred CcccHHHHHHHHHH-hh----c--ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---ccccCceeeeE--eCCCC
Confidence 99999999999983 21 1 11233446899999999999999999999999999 98788888754 33211
Q ss_pred ccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHH-hC
Q 043137 163 SHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAK-AG 241 (445)
Q Consensus 163 ~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~-~g 241 (445)
+ ++...+++.+...++|+++| . .|... ..+........+.++.+ +++|+ +|
T Consensus 125 -------~---------~e~~~~~a~~~~~~G~~~iK----l-~G~~~------~~~~~~~~~~~~d~e~v-~avR~avG 176 (405)
T 3rr1_A 125 -------R---------PADVIAGMKALQAGGFDHFK----L-NGCEE------MGIIDTSRAVDAAVARV-AEIRSAFG 176 (405)
T ss_dssp -------S---------HHHHHHHHHHHHHTTCCEEE----E-ESCCS------SSCBCSHHHHHHHHHHH-HHHHHTTG
T ss_pred -------C---------HHHHHHHHHHHHHcCCCEEE----E-ecCCc------ccccccchhHHHHHHHH-HHHHHHhC
Confidence 1 12223444444444555543 2 22110 00111001123334444 33443 45
Q ss_pred CCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCC
Q 043137 242 YTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGE 321 (445)
Q Consensus 242 ~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~ 321 (445)
+++.|++|+ |++||.++++++ .+.++++++.|||||++++|++++++|+++++
T Consensus 177 --~d~~L~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~- 229 (405)
T 3rr1_A 177 --NTVEFGLDF-----------------------HGRVSAPMAKVL-IKELEPYRPLFIEEPVLAEQAETYARLAAHTH- 229 (405)
T ss_dssp --GGSEEEEEC-----------------------CSCBCHHHHHHH-HHHHGGGCCSCEECSSCCSSTHHHHHHHTTCS-
T ss_pred --CCceEEEEC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCcccHHHHHHHHhcCC-
Confidence 589999999 367899999987 56789999999999999999999999999988
Q ss_pred CceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH--HHHHHhhhc
Q 043137 322 KVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 322 ~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~--~~~la~a~~ 399 (445)
+||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ + ++.++. .+||+.++.
T Consensus 230 -iPIa~dE~i-~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~-~-~s~i~~aa~~hlaaa~p 305 (405)
T 3rr1_A 230 -LPIAAGERM-FSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHC-P-LGPIALAACLHVDFVSW 305 (405)
T ss_dssp -SCEEECTTC-CSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBC-C-SCHHHHHHHHHHHHHCT
T ss_pred -CCEEecCCc-CCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCC-C-CcHHHHHHHHHHHHhCC
Confidence 999999985 6799999999999999999999999999999999999999999986654 3 576654 555555543
No 51
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=4.4e-47 Score=383.01 Aligned_cols=302 Identities=19% Similarity=0.256 Sum_probs=235.9
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+||+|++|||+++.. +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~~~~~~~~~~ 65 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPT---------------LVITGDSMDSIESA 65 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHHH
Confidence 8999999987732 333 35689999999999999976542 12567778888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| | .+++
T Consensus 66 l~~~l~~~l~g~~~~~~~~~~~~l~~~~~----------~--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~ 129 (366)
T 1tkk_A 66 IHHVLKPALLGKSLAGYEAILHDIQHLLT----------G--NMSAKAAVEMALYDGWAQMCGLPLYQMLG---G-YRDT 129 (366)
T ss_dssp HHHTHHHHHTTCBGGGHHHHHHHHHHSSS----------S--CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---C-CCSE
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhc----------C--CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---C-CCCc
Confidence 88889999999999999999999983221 1 25799999999999999999999999999 8 5677
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. +++++ +. +...+++.+...++|+.+| .|.|. .+.+.+.+++
T Consensus 130 v~~~~--~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~d~~~v 175 (366)
T 1tkk_A 130 LETDY--TVSVN-------SP---------EEMAADAENYLKQGFQTLK----IKVGK------------DDIATDIARI 175 (366)
T ss_dssp EEBCE--EECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SCHHHHHHHH
T ss_pred eeeeE--EecCC-------CH---------HHHHHHHHHHHHcCCCeEE----EEeCC------------CCHHHHHHHH
Confidence 88754 23222 11 1223445554445565544 34331 1233345666
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhcc--CCeeeEECCCCcCC
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISD--YPIVSIEDPFDQDD 308 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~--~~i~~iEdP~~~~D 308 (445)
+++|+++ | +++.|++|+| ++||.+++++++ +.+++ +++.|||||++++|
T Consensus 176 ~avr~a~---g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~~~i~~iEqP~~~~d 226 (366)
T 1tkk_A 176 QEIRKRV---G--SAVKLRLDAN-----------------------QGWRPKEAVTAI-RKMEDAGLGIELVEQPVHKDD 226 (366)
T ss_dssp HHHHHHH---C--SSSEEEEECT-----------------------TCSCHHHHHHHH-HHHHHTTCCEEEEECCSCTTC
T ss_pred HHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCceEEECCCCccc
Confidence 6666554 5 5899999993 578889999885 56889 99999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||+|++++++++|+++|++++++|+ .||.+
T Consensus 227 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i 302 (366)
T 1tkk_A 227 LAGLKKVTDATD--TPIMADESV-FTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSM-IETKL 302 (366)
T ss_dssp HHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCS-SCCHH
T ss_pred HHHHHHHHhhCC--CCEEEcCCC-CCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCc-cccHH
Confidence 999999999998 999999985 77999999999999999999999999999999999999999999988874 78988
Q ss_pred hHHHHHHhhhcCCc
Q 043137 389 TFIADLSVGLATGQ 402 (445)
Q Consensus 389 ~~~~~la~a~~~~~ 402 (445)
+.+++++++...+.
T Consensus 303 ~~~a~~~laaa~~~ 316 (366)
T 1tkk_A 303 GITAAAHFAASKRN 316 (366)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCC
Confidence 76666655543333
No 52
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=1.9e-47 Score=387.98 Aligned_cols=303 Identities=18% Similarity=0.218 Sum_probs=226.0
Q ss_pred CceEEEEEEEEEEecCC--------------CCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIFDSR--------------GNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~--------------g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|.|||++|+++.+..+. .+..++|+|+||+|++|||++.. + + +. .++
T Consensus 1 m~MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~-~----~-----------~~---~~~ 61 (389)
T 3ozy_A 1 MSLKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPSG-P----Y-----------DL---AVL 61 (389)
T ss_dssp -CCCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCCS-S----S-----------CH---HHH
T ss_pred CCCEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCCEEEEecCC-C----C-----------Cc---hHH
Confidence 78999999999885331 13468999999999999997652 1 0 11 223
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHH--hccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhcccc
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQ--LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELS 144 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~--l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~ 144 (445)
....++ .++|.|+|+||.+++.+|+.|++. +.+ .|+++...+|++|||+||||+.||.+|+|||+|||
T Consensus 62 ~~~~i~-~l~p~l~G~d~~~~~~~~~~l~~~~~~~~------~g~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLG--- 131 (389)
T 3ozy_A 62 KRAIED-VIGPQLIGEDPANINYLWHKVFHGEVSRN------LGHRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLG--- 131 (389)
T ss_dssp HHHHHH-TTHHHHTTSCTTCHHHHHHHHHHHTHHHH------HCSBSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---
T ss_pred HHHHHH-HHHHHHcCCCcchHHHHHHHHHhhhhhhc------cCCchHHHHHHHHHHHHHHHHhHhHcCCCHHHHhC---
Confidence 333454 599999999999999999999842 221 12334456899999999999999999999999999
Q ss_pred CCCcce-eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 043137 145 GNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 223 (445)
Q Consensus 145 G~~~~~-vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 223 (445)
|..+++ +|++. ++.| +. .+ ++...+++.+...++|+++| .|+|. +.
T Consensus 132 g~~r~~~v~~y~--~~~~-~~----~~---------~e~~~~~a~~~~~~G~~~iK----iKvG~-------------~~ 178 (389)
T 3ozy_A 132 GKFHTRGVRAYA--SSIY-WD----LT---------PDQAADELAGWVEQGFTAAK----LKVGR-------------AP 178 (389)
T ss_dssp SCSSTTCEEEEE--EEEC-SS----CC---------HHHHHHHHHHHHHTTCSEEE----EECCS-------------CH
T ss_pred CcccCCceeeEE--ecCC-CC----CC---------HHHHHHHHHHHHHCCCCEEe----eccCC-------------CH
Confidence 987777 88744 3211 00 01 11223334333334454443 34331 23
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||
T Consensus 179 ~~d~~~v~avR~a~---g--~d~~l~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~iEqP 229 (389)
T 3ozy_A 179 RKDAANLRAMRQRV---G--ADVEILVDA-----------------------NQSLGRHDALAM-LRILDEAGCYWFEEP 229 (389)
T ss_dssp HHHHHHHHHHHHHH---C--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCSEEESC
T ss_pred HHHHHHHHHHHHHc---C--CCceEEEEC-----------------------CCCcCHHHHHHH-HHHHHhcCCCEEECC
Confidence 44556666666555 5 589999999 367899999987 566899999999999
Q ss_pred CCcCCHHHHHHHH-HHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 304 FDQDDWEHYAKLT-SEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 304 ~~~~D~~~~~~L~-~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
++++|++++++|+ ++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |+
T Consensus 230 ~~~~d~~~~~~l~~~~~~--iPIa~dE~i-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~ 305 (389)
T 3ozy_A 230 LSIDDIEGHRILRAQGTP--VRIATGENL-YTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNP-HT 305 (389)
T ss_dssp SCTTCHHHHHHHHTTCCS--SEEEECTTC-CHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECC-CC
T ss_pred CCcccHHHHHHHHhcCCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cC
Confidence 9999999999999 8888 999999985 66999999999999999999999999999999999999999999865 53
Q ss_pred CCCChhh--HHHHHHhhhc
Q 043137 383 SGETEDT--FIADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~--~~~~la~a~~ 399 (445)
.++.++ +.+||+.+++
T Consensus 306 -~~~~i~~aa~~hlaaa~~ 323 (389)
T 3ozy_A 306 -FNDIITVAANLHLVAASP 323 (389)
T ss_dssp -TTSHHHHHHHHHHHHHCC
T ss_pred -CCcHHHHHHHHHHHHhCC
Confidence 467665 4566666654
No 53
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=4.9e-47 Score=381.87 Aligned_cols=296 Identities=19% Similarity=0.239 Sum_probs=226.2
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||++... +.|++++...+.+.
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 69 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAPF---------------PAVSGETQTGTSAA 69 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECCC---------------CTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCEEEEecccC---------------CCcCcCCHHHHHHH
Confidence 89999999888532 22 24689999999999999965432 12556677777777
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+ +.+.|.|+|+||.+++.+|+.|.+.+. ...+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 70 l-~~l~~~l~G~d~~~~~~~~~~l~~~~~------------~~~~a~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~ 132 (365)
T 3ik4_A 70 I-ERLQSHLLGADVRGWRKLAAMLDHAEH------------EAAAARCGLEMAMLDALTRHYHMPLHVFFG---GVS-KQ 132 (365)
T ss_dssp H-HHHGGGTTTCBGGGHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SE
T ss_pred H-HHHHHHHcCCCccCHHHHHHHHHHHhc------------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 7 479999999999999999999983221 125799999999999999999999999999 865 56
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. +++.+ + ++..++++.+...++|+++| .|+|. .+.+.+.+++
T Consensus 133 v~~~~--~~~~~-------~---------~e~~~~~a~~~~~~G~~~iK----~Kvg~------------~~~~~d~~~v 178 (365)
T 3ik4_A 133 LETDM--TITAG-------D---------EVHAAASAKAILARGIKSIK----VKTAG------------VDVAYDLARL 178 (365)
T ss_dssp EEBCE--EECCS-------C---------HHHHHHHHHHHHHTTCCCEE----EECCS------------SCHHHHHHHH
T ss_pred eeeeE--EecCC-------C---------HHHHHHHHHHHHHcCCCEEE----EEeCC------------CCHHHHHHHH
Confidence 77643 22211 1 12223444444444555543 44431 1123345555
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhh--ccCCeeeEECCCCcCC
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFI--SDYPIVSIEDPFDQDD 308 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l--~~~~i~~iEdP~~~~D 308 (445)
+++|+++ +++.|++|+ |+.||.++++++ .+.+ ++|++.|||||++++|
T Consensus 179 ~avr~~~------~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~~~i~~iEeP~~~~d 228 (365)
T 3ik4_A 179 RAIHQAA------PTAPLIVDG-----------------------NCGYDVERALAF-CAACKAESIPMVLFEQPLPRED 228 (365)
T ss_dssp HHHHHHS------SSCCEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCEEEEECCSCTTC
T ss_pred HHHHHhC------CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHhhCCCCceEEECCCCccc
Confidence 5554443 578999999 367899999987 4568 8899999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.+
T Consensus 229 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~i 303 (365)
T 3ik4_A 229 WAGMAQVTAQSG--FAVAADESA-RSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGG-MVESIL 303 (365)
T ss_dssp HHHHHHHHHHSS--SCEEESTTC-SSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SSCCHH
T ss_pred HHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecC-CcccHH
Confidence 999999999998 999999985 679999999999999999999999 999999999999999999998766 568866
Q ss_pred h--HHHHHHhhhc
Q 043137 389 T--FIADLSVGLA 399 (445)
Q Consensus 389 ~--~~~~la~a~~ 399 (445)
+ +.+||+.+++
T Consensus 304 g~aa~~hlaaa~p 316 (365)
T 3ik4_A 304 AMSFSANLAAGNG 316 (365)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCC
Confidence 5 4556665543
No 54
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=5.5e-47 Score=384.87 Aligned_cols=304 Identities=16% Similarity=0.166 Sum_probs=226.8
Q ss_pred eEEEEEEEEEEecCCCC----ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhh
Q 043137 3 ITITAVKARQIFDSRGN----PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPA 78 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~----~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~ 78 (445)
|||++|+++.+..+... ..++|+|+||+|++|||++.... + .+.|++++. .+++.++|.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~~G~GE~~~~~-~-----------~p~~~~e~~-----~i~~~l~p~ 63 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLTGIGEMSDFS-H-----------LPLYSVDLH-----DLKQGLLSI 63 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCEEEEEECCCS-S-----------SSSCCCCHH-----HHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCCEEEecccccc-C-----------CCccchhHH-----HHHHHHHHH
Confidence 89999999988654332 46899999999999999753210 0 022545544 466789999
Q ss_pred hcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEe
Q 043137 79 LAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNV 158 (445)
Q Consensus 79 LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~ 158 (445)
|+|+||.+++++|+.|.+.+... .|++ .+ +.+|+|||||||||+.||.+|+|||+||| |..++++|++. +
T Consensus 64 liG~d~~~~~~~~~~l~~~~~~~--~~~~-~g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~y~--t 133 (391)
T 3gd6_A 64 LLGQNPFDLMKINKELTDNFPET--MYYY-EK--GSFIRNGIDNALHDLCAKYLDISVSDFLG---GRVKEKIKVCY--P 133 (391)
T ss_dssp HTTCCTTCHHHHHHHHHHHSCCC--SCTT-CH--HHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEBCE--E
T ss_pred hCCCCccCHHHHHHHHHHHhhhc--cccc-Cc--chHHHHHHHHHHHHHHhcccCCcHHHHhC---CCcCCeEEeeE--E
Confidence 99999999999999998443211 1111 12 36899999999999999999999999999 98788888754 2
Q ss_pred ecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHH
Q 043137 159 INGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIA 238 (445)
Q Consensus 159 ~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~ 238 (445)
++..... .. ++..++++.+...++|+++| .|+|. +.+.+.++++++|+++
T Consensus 134 ~~~~~~~----~~--------~e~~~~~a~~~~~~G~~~~K----iKvG~-------------~~~~d~~~v~avR~a~- 183 (391)
T 3gd6_A 134 IFRHRFS----EE--------VESNLDVVRQKLEQGFDVFR----LYVGK-------------NLDADEEFLSRVKEEF- 183 (391)
T ss_dssp ECCCSST----TH--------HHHHHHHHHHHHHTTCCEEE----EECSS-------------CHHHHHHHHHHHHHHH-
T ss_pred ecccccC----CC--------HHHHHHHHHHHHHcCCCEEE----EeeCC-------------CHHHHHHHHHHHHHHc-
Confidence 3210000 00 12223444444444554443 34331 2234456666666555
Q ss_pred HhCCCCCeEEE-EeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCe--eeEECCCCcCCHHHHHHH
Q 043137 239 KAGYTGKVVIG-MDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPI--VSIEDPFDQDDWEHYAKL 315 (445)
Q Consensus 239 ~~g~~~~i~l~-vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i--~~iEdP~~~~D~~~~~~L 315 (445)
| +++.|+ +|+ |++||.++++++ .+.++++++ .|||||++++|++++++|
T Consensus 184 --g--~~~~l~~vDa-----------------------n~~~~~~~A~~~-~~~l~~~~i~~~~iEqP~~~~d~~~~~~l 235 (391)
T 3gd6_A 184 --G--SRVRIKSYDF-----------------------SHLLNWKDAHRA-IKRLTKYDLGLEMIESPAPRNDFDGLYQL 235 (391)
T ss_dssp --G--GGCEEEEEEC-----------------------TTCSCHHHHHHH-HHHHTTCCSSCCEEECCSCTTCHHHHHHH
T ss_pred --C--CCCcEEEecC-----------------------CCCcCHHHHHHH-HHHHHhcCCCcceecCCCChhhHHHHHHH
Confidence 5 589999 999 367899999987 567899999 999999999999999999
Q ss_pred HHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHH
Q 043137 316 TSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLS 395 (445)
Q Consensus 316 ~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la 395 (445)
+++++ +|| ||+ ++++++++++++.+++|++|+|++++||||++++++++|+++|++++++| +.|+.++.++.++
T Consensus 236 ~~~~~--iPI--dE~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~h 309 (391)
T 3gd6_A 236 RLKTD--YPI--SEH-VWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT-TQELSVGTAAMAH 309 (391)
T ss_dssp HHHCS--SCE--EEE-CCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHHH
T ss_pred HHHcC--CCc--CCC-CCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC-CCccHHHHHHHHH
Confidence 99998 999 777 46799999999999999999999999999999999999999999998776 5688776555444
Q ss_pred hh
Q 043137 396 VG 397 (445)
Q Consensus 396 ~a 397 (445)
++
T Consensus 310 la 311 (391)
T 3gd6_A 310 LG 311 (391)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 55
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=2.4e-47 Score=388.44 Aligned_cols=321 Identities=14% Similarity=0.130 Sum_probs=221.2
Q ss_pred eEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCC
Q 043137 3 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGK 82 (445)
Q Consensus 3 mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~ 82 (445)
||||+|+++.+. ..+..++|+|+||+|++|||++.. ++ ......+.+.++|.|+|+
T Consensus 1 MkIt~ie~~~~~--~~~~~~~V~v~td~G~~G~GE~~~-------------------~~---~~~~~~i~~~l~p~liG~ 56 (400)
T 4dxk_A 1 MKITKLETVRVA--ERTNLLWVLVHTDEGITGLGETFF-------------------GA---ETVETYVHEYIAPRVIGR 56 (400)
T ss_dssp CCEEEEEEEEET--TSTTEEEEEEEETTSCCEEEEEES-------------------CH---HHHHHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEEC--CCCCEEEEEEEECCCCEEEEcCCC-------------------Cc---cHHHHHHHHHHHHHhCCC
Confidence 899999998773 345679999999999999997321 11 222334556799999999
Q ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEe-ecC
Q 043137 83 DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNV-ING 161 (445)
Q Consensus 83 d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~-~~g 161 (445)
||.+++++|+.|. .+ |+++.+++..+|+|||||||||+.||.+|+|||+||| |+.|+++|++.+.. +.|
T Consensus 57 dp~~~~~~~~~~~-~~------~~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~yas~~~~~~ 126 (400)
T 4dxk_A 57 DPLQIDLLAQDLV-GY------LGFRSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLG---GFSRREIRTYNTCAGTEY 126 (400)
T ss_dssp CTTCHHHHHHHHC-CS------SSCSSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSCEEEEBC------
T ss_pred CcchHHHHHHHHH-HH------hccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCccCceeEEEecccccc
Confidence 9999999998883 32 2233445557899999999999999999999999999 98888899865321 111
Q ss_pred cccCCC--------Ccc-cceee--eccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC--CccChHH
Q 043137 162 GSHAGN--------KLA-MQEFM--ILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAP--NIQENKE 228 (445)
Q Consensus 162 g~~~~~--------~~~-~~e~~--~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~--~~~~~~~ 228 (445)
..+... ... ..+.. -+..+++.++ +...++|+++| .|.|... ..++.+++.+ +++.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~---~~~~~G~~~~K----ik~g~~~-~~~~~~g~~~~~~~~~d~~ 198 (400)
T 4dxk_A 127 IKKATGQQTANYGLSGGKDYDDLNGFLHRADELAH---SLLEDGITAMK----IWPFDAA-AEKTRGQYISMPDLKSALE 198 (400)
T ss_dssp ----------------------------CHHHHHH---HHHHTTCCEEE----ECTTHHH-HHHHTTSCCCHHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccHHHHHH---HHHHhCCCEEE----EcCCCcc-ccccccCcCCHHHHHHHHH
Confidence 000000 000 00000 0000111122 22233455543 2322000 0000011111 1223345
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
+++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|
T Consensus 199 ~v~avR~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~~~ 249 (400)
T 4dxk_A 199 PFEKIRKAV---G--DKMDIMVEF-----------------------HSMWQLLPAMQI-AKALTPYQTFWHEDPIKMDS 249 (400)
T ss_dssp HHHHHHHHH---G--GGSEEEEEC-----------------------TTCBCHHHHHHH-HHHTGGGCCSEEECCBCTTS
T ss_pred HHHHHHHHc---C--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEEcCCCccc
Confidence 555555554 5 589999999 367899999987 56789999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |++. +.+
T Consensus 250 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~-h~~~-s~i 324 (400)
T 4dxk_A 250 LSSLTRYAAVSP--APISASETL-GSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAP-HXCT-GPV 324 (400)
T ss_dssp GGGHHHHHHHCS--SCEEECTTC-CHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEE-C-CC-CHH
T ss_pred HHHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCCC-ChH
Confidence 999999999998 999999985 66999999999999999999999999999999999999999999865 4343 555
Q ss_pred h--HHHHHHhhhc
Q 043137 389 T--FIADLSVGLA 399 (445)
Q Consensus 389 ~--~~~~la~a~~ 399 (445)
+ +.+||+.++.
T Consensus 325 ~~aa~~hlaaa~p 337 (400)
T 4dxk_A 325 VLCASTHLSLNAP 337 (400)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCC
Confidence 4 5556666544
No 56
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=6.9e-47 Score=388.41 Aligned_cols=315 Identities=13% Similarity=0.153 Sum_probs=223.7
Q ss_pred ceEEEEEEEEEEecC-------CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS-------RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~-------~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.||||+|+++.+..+ .| ...++|+|+||+|++|+|+++. + .....
T Consensus 27 ~mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g--------------------~---~~~~~ 83 (445)
T 3vdg_A 27 RIRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGLTGLGETYA--------------------D---TVHLE 83 (445)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEECC--------------------C---HHHHH
T ss_pred CCEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCCeEEEeCCC--------------------h---HHHHH
Confidence 589999999988532 11 2347899999999999997642 1 12233
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccc------cchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQK------LGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~------~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
.| +.++|.|+|+||.+++++|+.|++.+.+....-.+|..+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 84 ~i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG-- 160 (445)
T 3vdg_A 84 RL-QAAAHAIVGRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLG-- 160 (445)
T ss_dssp HH-HHHHHHHTTCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT--
T ss_pred HH-HHHHHHhCCCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 45 469999999999999999999995442210000011112 345799999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPN 222 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 222 (445)
|..++++|++.|.......+ ++. .......+..+++.++++.+...+ +|+++| .|.|. .+
T Consensus 161 -G~~r~~v~~~a~~~~~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~~ 221 (445)
T 3vdg_A 161 -GAVRDAVPFSAYLFYKWAAH-PGA-EPDGWGAALDPDGIVAQARRMIDEYGFSAIK----LKGGV------------FA 221 (445)
T ss_dssp -CCSSSEEEBCEEEECBCSSS-TTS-CCCSSCCBCSHHHHHHHHHHHHHHHCCSSEE----EECSS------------SC
T ss_pred -CCCCCeEEEeeeeccccccc-CCc-cccccccCCCHHHHHHHHHHHHHhcCCCEEE----ECCCC------------CC
Confidence 98888899866542110000 000 000000001122334445444432 565543 34331 11
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
.+.+.++++++|+++ +++.|++|+ |+.||.++++++ .+.++++ +.||||
T Consensus 222 ~~~Di~~v~avRea~------~d~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iEe 270 (445)
T 3vdg_A 222 PEEEMAAVEALRAAF------PDHPLRLDP-----------------------NAAWTPQTSVKV-AAGLEGV-LEYLED 270 (445)
T ss_dssp HHHHHHHHHHHHHHC------TTSCEEEEC-----------------------TTCSCHHHHHHH-HHHTTTT-CSEEEC
T ss_pred HHHHHHHHHHHHHhC------CCCcEEEEC-----------------------CCCCCHHHHHHH-HHHHhhH-HHeeeC
Confidence 233445555454443 589999999 468999999988 4568999 999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++ |++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|++++ +|.
T Consensus 271 P~~--~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~-~h~ 344 (445)
T 3vdg_A 271 PTP--GLDGMAEVAAQAP--MPLATNMCV-VAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLLAGICDTFGLGLS-MHS 344 (445)
T ss_dssp CSS--SHHHHHHHHHHCS--SCEEESSSC-CSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-ECC
T ss_pred CCC--CHHHHHHHHhcCC--CCEEcCCcC-CCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHHHHHHHHcCCEEE-EeC
Confidence 995 8999999999998 999999985 6799999999999999999999999999999999999999999975 465
Q ss_pred CCCChhhH--HHHHHhhh
Q 043137 383 SGETEDTF--IADLSVGL 398 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~ 398 (445)
+.|+.++. .+||++++
T Consensus 345 ~~e~~i~~aa~~hlaaa~ 362 (445)
T 3vdg_A 345 NSHLGISLAAMVHLAAAT 362 (445)
T ss_dssp CSCCHHHHHHHHHHHHTC
T ss_pred CcchHHHHHHHHHHHHhC
Confidence 67777664 45666554
No 57
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=2.4e-47 Score=391.98 Aligned_cols=307 Identities=18% Similarity=0.194 Sum_probs=222.6
Q ss_pred ceEEEEEEEEEEecCC----------C----CceEEEEEEeCC--CceEEEeccCCCccccccceeeccCCCCCCCccHH
Q 043137 2 AITITAVKARQIFDSR----------G----NPTVEVDVTTSD--GHVARAAVPSGASTGIYEALELRDGGSDYLGKGVS 65 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~----------g----~~~v~V~v~td~--G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~ 65 (445)
.|||++|+++.+..+. . ...++|+|+||+ |++|+|++... +.+..
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~~G~Ge~~~~-------------------g~~~~ 64 (441)
T 4a35_A 4 RGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTL-------------------GKGTE 64 (441)
T ss_dssp CCBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCCCEEEEEEEC-------------------STTHH
T ss_pred CCEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCCEEEEeeeCC-------------------CCChH
Confidence 3799999999885321 1 236899999998 99999975431 11123
Q ss_pred HHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccc-cc-cccchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 66 KAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGW-CK-QKLGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 66 ~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~-~~-~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
.+...+ +.++|.|+|+||.+++++|+.+++.+.... .+.| |. +++...|+||||+||||++||.+|+|||+|||
T Consensus 65 ~~~~~i-~~l~~~liG~d~~~i~~~~~~~~~~l~~~~-~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG-- 140 (441)
T 4a35_A 65 VVVCAV-NALAHHVLNKDLKDIVGDFRGFYRQLTSDG-QLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLV-- 140 (441)
T ss_dssp HHHHHH-HHHGGGTTTCBHHHHHTTHHHHHHHHHSCT-TGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHH--
T ss_pred HHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHHHhhcc-ceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 444445 569999999999999877777765443211 1222 21 23446899999999999999999999999999
Q ss_pred cCCCcceee---------------------------------------eeeEEeecCcccCCCCcccceeeeccCChhcH
Q 043137 144 SGNKNLVLP---------------------------------------VPAFNVINGGSHAGNKLAMQEFMILPVGASCF 184 (445)
Q Consensus 144 ~G~~~~~vp---------------------------------------~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~ 184 (445)
|..+++++ +|+|++. +|+.. .+ ++...
T Consensus 141 -G~~r~~i~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~-~g~~~---~~---------~e~~~ 206 (441)
T 4a35_A 141 -DMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTS-CAWLG---YS---------DDTLK 206 (441)
T ss_dssp -HSCHHHHHTTCCCTTTTTTCCHHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECT-TCCTT---CC---------HHHHH
T ss_pred -CCCcccceecccccccccccchhhhhhhhhhcccccchhhhhhcccCcceEEec-cccCC---CC---------HHHHH
Confidence 87655543 3455542 22211 01 11223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCcee
Q 043137 185 KEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTY 264 (445)
Q Consensus 185 ~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y 264 (445)
+++.+...++|+++| .|.|. +.+.+.++++++|+++ | +++.|++|+
T Consensus 207 ~~a~~~~~~Gf~~~K----lKvG~-------------~~~~d~~~v~avR~a~---G--~~~~l~vDa------------ 252 (441)
T 4a35_A 207 QLCAQALKDGWTRFK----VKVGA-------------DLQDDMRRCQIIRDMI---G--PEKTLMMDA------------ 252 (441)
T ss_dssp HHHHHHHHTTCCEEE----EECSS-------------CHHHHHHHHHHHHHHH---C--TTSEEEEEC------------
T ss_pred HHHHHHHHCCCCEEE----EcCCC-------------CHHHHHHHHHHHHHHh---C--CCCeEEEEC------------
Confidence 344444444555543 34331 2334455666666555 6 589999999
Q ss_pred eecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHH---hCCCceEEeCcccccCHHHHHHH
Q 043137 265 DLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSE---VGEKVQIVGDDLLVTNPKRVEKA 341 (445)
Q Consensus 265 ~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~---~~~~vpI~gde~~~~~~~~~~~~ 341 (445)
|+.||.++++++ .+.++++++.|||||++++|++++++|+++ ++ +||++||+. .++++++++
T Consensus 253 -----------N~~~~~~~A~~~-~~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~--iPIa~gE~~-~~~~~~~~~ 317 (441)
T 4a35_A 253 -----------NQRWDVPEAVEW-MSKLAKFKPLWIEEPTSPDDILGHATISKALVPLG--IGIATGEQC-HNRVIFKQL 317 (441)
T ss_dssp -----------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGT--CEEEECTTC-CSHHHHHHH
T ss_pred -----------CCCCCHHHHHHH-HHhhcccCccEEeCCCCcccHHHHHHHHHhccCCC--CCEEeCCcc-ccHHHHHHH
Confidence 367899999988 556899999999999999999999999998 66 999999985 679999999
Q ss_pred HhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH-HHHHHh
Q 043137 342 IKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF-IADLSV 396 (445)
Q Consensus 342 i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~-~~~la~ 396 (445)
++.+++|++|+|++++||||++++++++|+++|+++ .+|.+ ..+.++ .+||++
T Consensus 318 l~~~a~div~~d~~~~GGit~~~kia~lA~~~gv~v-~~H~~-~ig~aa~~~hl~~ 371 (441)
T 4a35_A 318 LQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPV-CPHAG-GVGLCELVQHLII 371 (441)
T ss_dssp HHTTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCB-CCCCC-TTTHHHHHHHHHH
T ss_pred HHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEE-EEeCC-hHHHHHHHHHHhh
Confidence 999999999999999999999999999999999997 66743 333332 346653
No 58
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=1.4e-47 Score=384.97 Aligned_cols=297 Identities=18% Similarity=0.224 Sum_probs=229.2
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||++...+ .|++++...+.+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~~e~~~~~~~~ 65 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLLGLGAASPER---------------HVTGETLEACHAA 65 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCEEEEEECCCH---------------HHHCCCHHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCEEEecccCCC---------------CcCcCCHHHHHHH
Confidence 89999999887432 22 246899999999999999754321 1445666777777
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.+.|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |. +++
T Consensus 66 l~~~l~~~l~G~~~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~~ 129 (356)
T 3ro6_B 66 LDHDRLGWLMGRDIRTLPRLCRELAERLPA------------APAARAALDMALHDLVAQCLGLPLVEILG---RA-HDS 129 (356)
T ss_dssp HCGGGCTTTTTCBGGGHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTC---CC-CSC
T ss_pred HHHHhHHHhcCCCccCHHHHHHHHHHhhcc------------chhHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCc
Confidence 888899999999999999999999843221 25799999999999999999999999999 86 566
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. .++.+ + ++...+++.+...++|+.+| .|+|. +.+.+.+++
T Consensus 130 v~~~~--~~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----~K~G~-------------~~~~d~~~v 174 (356)
T 3ro6_B 130 LPTSV--TIGIK-------P---------VEETLAEAREHLALGFRVLK----VKLCG-------------DEEQDFERL 174 (356)
T ss_dssp EEBCE--EECSC-------C---------HHHHHHHHHHHHHTTCCEEE----EECCS-------------CHHHHHHHH
T ss_pred eeeeE--EEcCC-------C---------HHHHHHHHHHHHHcCCCEEE----EEeCC-------------CHHHHHHHH
Confidence 77643 22211 0 12233444444444555443 34331 223445566
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+++|+++ | +++.|++|+ |++|+.++++++ .+.++++++.|||||++++|++
T Consensus 175 ~avR~~~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~ 225 (356)
T 3ro6_B 175 RRLHETL---A--GRAVVRVDP-----------------------NQSYDRDGLLRL-DRLVQELGIEFIEQPFPAGRTD 225 (356)
T ss_dssp HHHHHHH---T--TSSEEEEEC-----------------------TTCCCHHHHHHH-HHHHHHTTCCCEECCSCTTCHH
T ss_pred HHHHHHh---C--CCCEEEEeC-----------------------CCCCCHHHHHHH-HHHHHhcCCCEEECCCCCCcHH
Confidence 6555554 5 589999999 367899999987 5668999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcC-CCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEK-TCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~-a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
++++|+++++ +||++||+. .++++++++++.+ ++|++|||++++||||++++++++|+++|+++++++ +.|+..+
T Consensus 226 ~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i~ 301 (356)
T 3ro6_B 226 WLRALPKAIR--RRIAADESL-LGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGC-MDESRIS 301 (356)
T ss_dssp HHHTSCHHHH--HTEEESTTC-CSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECC-CSCCHHH
T ss_pred HHHHHHhcCC--CCEEeCCcC-CCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHH
Confidence 9999999998 999999985 6799999999999 999999999999999999999999999999998866 5788766
Q ss_pred H--HHHHHhhh
Q 043137 390 F--IADLSVGL 398 (445)
Q Consensus 390 ~--~~~la~a~ 398 (445)
. .+||+.++
T Consensus 302 ~aa~~hlaaa~ 312 (356)
T 3ro6_B 302 IAAALHAALAC 312 (356)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcC
Confidence 4 45555544
No 59
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=4.5e-47 Score=383.22 Aligned_cols=304 Identities=18% Similarity=0.171 Sum_probs=224.4
Q ss_pred eEEEEEEEEEEecCC---------C----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 3 ITITAVKARQIFDSR---------G----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 3 mkI~~v~~~~v~~~~---------g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
|||++|+++.+..+. + ...++|+|+||+|++|||++..... . .+..++..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~---------------~--~~~~~~~~ 63 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAH---------------L--PSDRLITS 63 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCEEEEEEEECCC---------------H--HHHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCEEEEeccCccc---------------c--CcHHHHHH
Confidence 899999998874321 1 2458999999999999996543110 0 01234455
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCccccccc--ccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQ--KLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK 147 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~--~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~ 147 (445)
.|++.++|.|+|+||.+++++|+.|++... | .+++ ++..+|++|||+||||+.||.+|+|||+||| |..
T Consensus 64 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~-----~-~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llG---g~~ 134 (372)
T 3tj4_A 64 CISDCYAPLLLGEDASDHSRLWTKLARYPS-----L-QWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLG---GAR 134 (372)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHHTCHH-----H-HTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCS
T ss_pred HHHHHHHHHhCCCChhhHHHHHHHHHHhhH-----h-hcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcC---CCC
Confidence 677789999999999999999999983211 0 0112 4456899999999999999999999999999 977
Q ss_pred cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 148 NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 148 ~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
++++|+ |+++ +|+.. .+ +++.++++.+...+ +|+++| .|+|. ++.+.+
T Consensus 135 ~~~v~~--y~s~-~~~~~---~~---------~~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~~~~d 183 (372)
T 3tj4_A 135 TAGVEA--YNTD-IGWLS---FT---------LEDLLAGSARAVEEDGFTRLK----IKVGH------------DDPNID 183 (372)
T ss_dssp CSCEEE--EECT-TCCTT---SC---------HHHHHHHHHHHHHTTCCCEEE----EECCC------------SSHHHH
T ss_pred CCCeEE--EEec-CCccC---CC---------HHHHHHHHHHHHHccCCCEEE----EcCCC------------CCHHHH
Confidence 666776 4432 22210 01 12234444444444 555543 44431 122334
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.+.++++|++ +| +++.|++|+ |++||.++++++ .+.++++++.|||||+++
T Consensus 184 ~~~v~avR~~---~g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~ 234 (372)
T 3tj4_A 184 IARLTAVRER---VD--SAVRIAIDG-----------------------NGKWDLPTCQRF-CAAAKDLDIYWFEEPLWY 234 (372)
T ss_dssp HHHHHHHHHH---SC--TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHTTTSCEEEEESCSCT
T ss_pred HHHHHHHHHH---cC--CCCcEEeeC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEECCCCc
Confidence 5555555444 35 589999999 367899999987 456899999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC-CCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR-SGE 385 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~-~~e 385 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++. +.+
T Consensus 235 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~g~~~~ 311 (372)
T 3tj4_A 235 DDVTSHARLARNTS--IPIALGEQL-YTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQ 311 (372)
T ss_dssp TCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCCTTTTT
T ss_pred hhHHHHHHHHhhcC--CCEEeCCCc-cCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCchHHH
Confidence 99999999999998 999999985 67999999999999999999999999999999999999999999865441 223
Q ss_pred ChhhHHHHHHhhhc
Q 043137 386 TEDTFIADLSVGLA 399 (445)
Q Consensus 386 t~~~~~~~la~a~~ 399 (445)
+.+|++.++.
T Consensus 312 ----~~~~l~aa~~ 321 (372)
T 3tj4_A 312 ----VHVHLSYWHP 321 (372)
T ss_dssp ----THHHHHHHCT
T ss_pred ----HHHHHhhhCC
Confidence 3578877764
No 60
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=5.1e-47 Score=382.27 Aligned_cols=300 Identities=19% Similarity=0.266 Sum_probs=228.2
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++...+ .|++++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~~e~~~~~~~~ 65 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHIGYGECSPFM---------------TIHGESMDTAFIV 65 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCEEEEEECCCH---------------HHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCEEEeeccCCC---------------CcCCCCHHHHHHH
Confidence 8999999987742 222 356899999999999999754311 1345556666655
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+ +.++|.|+|+||.+++++|+.|++.+.+ ..+|++|||+||||+.||.+|+|||+||| |.. .+
T Consensus 66 ~-~~l~~~l~G~d~~~~~~~~~~l~~~~~~------------~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~-~~ 128 (368)
T 3q45_A 66 G-QYLAKGLIGTSCLDIVSNSLLMDAIIYG------------NSCIKSAFNIALYDLAAQHAGLPLYAFLG---GKK-DK 128 (368)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHCSC------------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-CS
T ss_pred H-HHHHHHhcCCChhhHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Ce
Confidence 6 4799999999999999999999843211 15799999999999999999999999999 874 45
Q ss_pred e-eeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 L-PVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 v-p~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+ |++. .++.+ .++...+++.+...++|+++| .|+|. +.+.+.++
T Consensus 129 v~~~~~--~~~~~----------------~~e~~~~~a~~~~~~G~~~~K----~KvG~-------------~~~~d~~~ 173 (368)
T 3q45_A 129 IIQTDY--TVSID----------------EPHKMAADAVQIKKNGFEIIK----VKVGG-------------SKELDVER 173 (368)
T ss_dssp CEEBCE--EECSC----------------CHHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHH
T ss_pred eeeeEE--EecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEecC-------------CHHHHHHH
Confidence 6 5532 22111 112234445444444565543 44431 12334556
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 174 v~avR~~~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~~~ 224 (368)
T 3q45_A 174 IRMIREAA---G--DSITLRIDA-----------------------NQGWSVETAIET-LTLLEPYNIQHCEEPVSRNLY 224 (368)
T ss_dssp HHHHHHHH---C--SSSEEEEEC-----------------------TTCBCHHHHHHH-HHHHGGGCCSCEECCBCGGGG
T ss_pred HHHHHHHh---C--CCCeEEEEC-----------------------CCCCChHHHHHH-HHHHhhcCCCEEECCCChhHH
Confidence 66555554 5 589999999 367899999987 556899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+..+
T Consensus 225 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~ 300 (368)
T 3q45_A 225 TALPKIRQACR--IPIMADESC-CNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG-FLESRLG 300 (368)
T ss_dssp GGHHHHHHTCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC-SSCCHHH
T ss_pred HHHHHHHhhCC--CCEEEcCCc-CCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC-ccccHHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999998876 4688776
Q ss_pred HHHHHHhhhcCCc
Q 043137 390 FIADLSVGLATGQ 402 (445)
Q Consensus 390 ~~~~la~a~~~~~ 402 (445)
.++.++++...+.
T Consensus 301 ~aa~~hlaaa~p~ 313 (368)
T 3q45_A 301 FTAAAHVALVSKT 313 (368)
T ss_dssp HHHHHHHHTTCTT
T ss_pred HHHHHHHHHcCCC
Confidence 5554444433333
No 61
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=1.9e-46 Score=380.38 Aligned_cols=299 Identities=14% Similarity=0.131 Sum_probs=225.4
Q ss_pred ceEEEEEEEEEEecCC---------C----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 2 AITITAVKARQIFDSR---------G----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~---------g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
.|||++|+++.+..+. + +..++|+|+||+|++|||++... ++.|+.++...+.
T Consensus 22 ~MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~G~GE~~~~--------------~~~~~~~~~~~~~ 87 (391)
T 4e8g_A 22 SMKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLAGWGETCPV--------------GPTYAPSHALGAR 87 (391)
T ss_dssp -CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCEEEEEECCS--------------STTTSSCCHHHHH
T ss_pred CCEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCEEEecCcCC--------------CCccCCccHHHHH
Confidence 4999999998885432 1 34689999999999999965321 0124444556666
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCc
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN 148 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~ 148 (445)
..+++ +.|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |..+
T Consensus 88 ~~l~~-l~p~l~G~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r 151 (391)
T 4e8g_A 88 AALAE-MAPGLIGANPLQPLVLRRRMDGLLC----------G--HNYAKAAIDIAAYDLMGKHYGVRVADLLG---GVAA 151 (391)
T ss_dssp HHHHH-HGGGGTTCCTTCHHHHHHHHHTTCS----------S--CHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSC
T ss_pred HHHHH-HHHHHCCCCcCCHHHHHHHHHHHhc----------C--cHHHHHHHHHHHHHHHHHHcCChHHHhcC---CCCC
Confidence 66765 9999999999999999999983211 1 15799999999999999999999999999 9877
Q ss_pred ceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH
Q 043137 149 LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 149 ~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
+++|++.. ++.+ + ++...+++.+...++|+.+| .|+|. .+.+.+.+
T Consensus 152 ~~v~~y~s--~~~~-------~---------~e~~~~~a~~~~~~G~~~~K----lKvg~------------~~~~~d~~ 197 (391)
T 4e8g_A 152 ERVPSYYA--TGIG-------Q---------PDEIARIAAEKVAEGFPRLQ----IKIGG------------RPVEIDIE 197 (391)
T ss_dssp SEEECCEE--ECSC-------C---------HHHHHHHHHHHHHTTCSEEE----EECCS------------SCHHHHHH
T ss_pred CcEEEeEE--cCCC-------C---------HHHHHHHHHHHHHcCCcEEE----EcCCC------------CCHHHHHH
Confidence 88888543 2211 1 12223444444444565543 44431 12233455
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
+++++|+++ |- +++.|++|+ |+.||.++++++ .+.++++++ |||||+ +|
T Consensus 198 ~v~avR~a~---gg-~~~~L~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~i-~iEeP~--~~ 246 (391)
T 4e8g_A 198 TVRKVWERI---RG-TGTRLAVDG-----------------------NRSLPSRDALRL-SRECPEIPF-VLEQPC--NT 246 (391)
T ss_dssp HHHHHHHHH---TT-TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHCTTSCE-EEESCS--SS
T ss_pred HHHHHHHHh---CC-CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHhhcCe-EEecCC--cc
Confidence 555555544 40 379999999 367899999987 456899999 999995 58
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +.|+.+
T Consensus 247 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i 322 (391)
T 4e8g_A 247 LEEIAAIRGRVQ--HGIYLDESG-EDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDD-AWGGDI 322 (391)
T ss_dssp HHHHHHHGGGCC--SCEEESTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEEC-SSCSHH
T ss_pred HHHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCC-cCCCHH
Confidence 999999999998 999999985 5699999999999999999999999999999999999999999998887 467877
Q ss_pred hHH--HHHHhhhc
Q 043137 389 TFI--ADLSVGLA 399 (445)
Q Consensus 389 ~~~--~~la~a~~ 399 (445)
+.. +||+.++.
T Consensus 323 ~~aa~~hlaaa~p 335 (391)
T 4e8g_A 323 IAAACTHIGATVQ 335 (391)
T ss_dssp HHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhCC
Confidence 654 55555543
No 62
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=1.8e-46 Score=383.14 Aligned_cols=321 Identities=15% Similarity=0.109 Sum_probs=225.2
Q ss_pred CceEEEEEEEEEEecCCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhc
Q 043137 1 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALA 80 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~Li 80 (445)
|.||||+|++..+. ...++.++|+|+||+|++|||++... |+.+++. ..+ +.|+|.|+
T Consensus 1 ~~MkI~~i~~~~~~-~~~~~~~~V~v~td~G~~G~GE~~~~-----------------~~~~~~~---~~i-~~l~p~li 58 (409)
T 3go2_A 1 MSLKVVSVDTLCCD-AGWRNYHFVKLTTDEGIVGWSEFDEG-----------------FGSPGVT---AVI-EQLGKRLV 58 (409)
T ss_dssp -CCBEEEEEEEEEE-CSSSEEEEEEEEETTCCEEEEEECST-----------------TTCTTHH---HHH-HHHHHHHT
T ss_pred CCCEEEEEEEEEEC-CCCccEEEEEEEECCCCEEEEeecCC-----------------CCcHHHH---HHH-HHHHHHhc
Confidence 89999999998774 33456799999999999999975431 2222333 234 56999999
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeec
Q 043137 81 GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVIN 160 (445)
Q Consensus 81 G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~ 160 (445)
|+||.+++++|+.|++.+. |+.+++..+|+|||||||||+.||.+|+|||+||| |+.++++|++.. ..
T Consensus 59 G~d~~~~e~~~~~~~~~~~-------~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~s--~~ 126 (409)
T 3go2_A 59 GASVMEHERFFAEAYCLTR-------PATGGVVSEGIGAIENALLDAKAKTLNVPCYELLG---GKLRDRVPVYWS--HC 126 (409)
T ss_dssp TSBTTCHHHHHHHHHHHHG-------GGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSEEEEEEC--ST
T ss_pred CCChhhHHHHHHHHHHHhc-------cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeEEEEEe--ec
Confidence 9999999999999985432 22344556899999999999999999999999999 987888888532 11
Q ss_pred CcccCC-CCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCc------ccCCCCCCCCCcc-------Ch
Q 043137 161 GGSHAG-NKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAT------NVGDEGGFAPNIQ-------EN 226 (445)
Q Consensus 161 gg~~~~-~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~------~~~~~g~~~~~~~-------~~ 226 (445)
+++... ....... ...++...+++.+...++|+++| .|++.... ..|..+.+.++.+ .+
T Consensus 127 ~~~~i~~~~~~~~~---~~~~e~~~~~a~~~~~~Gf~~iK----lKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~ 199 (409)
T 3go2_A 127 PTWRINHPKFFGPP---VTDLDGVKRTAEEARERQFRAIK----TNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNL 199 (409)
T ss_dssp THHHHHCTTTSSSC---CCSHHHHHHHHHHHHHTTCCEEE----ECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHH
T ss_pred CccccccccccccC---CCCHHHHHHHHHHHHHcCCCEEE----EcccccccccccccccCCCccCCcccccchHHHHHH
Confidence 111000 0000000 00112223344444444565554 34310000 0010001122221 12
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||+
T Consensus 200 ~e~v~avR~av---G--~d~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iE~P~-- 248 (409)
T 3go2_A 200 RAHLEALRDGA---G--PDVEILLDL-----------------------NFNAKPEGYLKI-LRELADFDLFWVEIDS-- 248 (409)
T ss_dssp HHHHHHHHHHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCCSEEECCC--
T ss_pred HHHHHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHhhcCCeEEEeCc--
Confidence 34455454444 6 589999999 367899999987 5568999999999997
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et 386 (445)
+|++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++ |+ .++
T Consensus 249 ~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h~-~~s 322 (409)
T 3go2_A 249 YSPQGLAYVRNHSP--HPISSCETL-FGIREFKPFFDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAP-HN-FYG 322 (409)
T ss_dssp SCHHHHHHHHHTCS--SCEEECTTC-CHHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEE-CC-CSC
T ss_pred CCHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEee-cC-CCc
Confidence 49999999999998 999999985 569999999999999999999999 9999999999999999999976 74 677
Q ss_pred hhhH--HHHHHhhhc
Q 043137 387 EDTF--IADLSVGLA 399 (445)
Q Consensus 387 ~~~~--~~~la~a~~ 399 (445)
.++. .+||++++.
T Consensus 323 ~i~~aa~~hlaaa~p 337 (409)
T 3go2_A 323 HLCTMINANFAAAVP 337 (409)
T ss_dssp HHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCC
Confidence 6654 556665544
No 63
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=1.5e-46 Score=378.82 Aligned_cols=296 Identities=18% Similarity=0.219 Sum_probs=231.2
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||+++.. +.|++++...+.+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 65 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPR---------------PFTYGETQTGIVAV 65 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCEEEEeccCC---------------CCccCCCHHHHHHH
Confidence 89999999888532 12 35689999999999999976432 12556777787888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
|++.+.|.|+|+||.+++++|+.|. ... + ..+|++|||+||||+.||.+|+|||+||| | .+++
T Consensus 66 i~~~l~~~l~G~d~~~~~~~~~~l~-~~~----------~--~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g-~~~~ 128 (367)
T 3dg3_A 66 IEQYFAPALIGLTLTEREVAHTRMA-RTV----------G--NPTAKAAIDMAMWDALGQSLRLSVSEMLG---G-YTDR 128 (367)
T ss_dssp HHHTHHHHHTTCBTTCHHHHHHHHT-TSC----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---C-CCSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-hcc----------C--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCe
Confidence 8889999999999999999999988 321 1 25799999999999999999999999999 8 6677
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|++. +++.+ + +++.++++.+...+ +|+++| .|+|. .+ .+.+.++
T Consensus 129 v~~~~--~~~~~-------~---------~~~~~~~a~~~~~~~G~~~~K----~K~g~-----------~~-~~~d~~~ 174 (367)
T 3dg3_A 129 MRVSH--MLGFD-------D---------PVKMVAEAERIRETYGINTFK----VKVGR-----------RP-VQLDTAV 174 (367)
T ss_dssp EEEEE--EEESS-------C---------HHHHHHHHHHHHHHHCCCEEE----EECCC-----------SS-THHHHHH
T ss_pred EEEEE--EecCC-------C---------HHHHHHHHHHHHHhcCccEEE----EeeCC-----------Ch-hhhHHHH
Confidence 87743 33211 0 12234455554444 565543 45442 11 1134666
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 175 v~avR~a~---g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~ 225 (367)
T 3dg3_A 175 VRALRERF---G--DAIELYVDG-----------------------NRGWSAAESLRA-MREMADLDLLFAEELCPADDV 225 (367)
T ss_dssp HHHHHHHH---G--GGSEEEEEC-----------------------TTCSCHHHHHHH-HHHTTTSCCSCEESCSCTTSH
T ss_pred HHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHHhCCCEEECCCCcccH
Confidence 66666665 5 589999999 367899999987 567899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|+|++++ |||++++++++|+++|++++++| +.|+.++
T Consensus 226 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~-~~es~i~ 300 (367)
T 3dg3_A 226 LSRRRLVGQLD--MPFIADESV-PTPADVTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLGLDMVMGN-QIDGQIG 300 (367)
T ss_dssp HHHHHHHHHCS--SCEEECTTC-SSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHTCEEEECC-SSCCHHH
T ss_pred HHHHHHHHhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcCCeEEECC-cCCcHHH
Confidence 99999999998 999999985 6799999999999999999999999 99999999999999999998877 5688766
Q ss_pred HH--HHHHhhh
Q 043137 390 FI--ADLSVGL 398 (445)
Q Consensus 390 ~~--~~la~a~ 398 (445)
.. +||+.++
T Consensus 301 ~aa~~hlaaa~ 311 (367)
T 3dg3_A 301 TACTVSFGTAF 311 (367)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhC
Confidence 54 4554443
No 64
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=6.2e-47 Score=383.90 Aligned_cols=297 Identities=18% Similarity=0.262 Sum_probs=229.7
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++...+ .|++++...+...
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~~---------------~~~~e~~~~~~~~ 69 (389)
T 3s5s_A 5 TLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTLGFGEAAPLP---------------AFNGETQDGSRAA 69 (389)
T ss_dssp TBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCH---------------HHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCEEEEeccCCC---------------CcCccCHHHHHHH
Confidence 8999999987742 333 356899999999999999754311 1445666777766
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+ +.+.|.|+|+||.+++++|+.|.+.+.+ ...+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 70 l-~~l~~~l~G~d~~~~~~~~~~l~~~~~~-----------~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~ 133 (389)
T 3s5s_A 70 A-VSLREAVVGSDARAWRAVARALREASGG-----------GAGAARCAIETAILDALTKRAGMPLWAFFG---GSG-TA 133 (389)
T ss_dssp H-HHTHHHHTTSBGGGHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHHHHTTTCBHHHHTT---CSC-SE
T ss_pred H-HHHHHHhcCCCccCHHHHHHHHHHhhcc-----------ChHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 7 4699999999999999999999843321 113799999999999999999999999999 865 56
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. +++.+ .++..++++.+...++|+++| .|+|. .+.+.+.+++
T Consensus 134 v~~~~--t~~~~----------------~~e~~~~~a~~~~~~G~~~iK----lKvg~------------~~~~~d~~~v 179 (389)
T 3s5s_A 134 LTTDI--TITTG----------------SPERAEEAARRAAAMGFRALK----VKVGG------------RLAASDPARI 179 (389)
T ss_dssp EECCE--EECSS----------------CSHHHHHHHHHHHHHTCCEEE----EECCG------------GGTTTHHHHH
T ss_pred eEEEe--eecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEecC------------CChHHHHHHH
Confidence 77643 22211 112334455555555666554 45441 1134557777
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhh--ccCCeeeEECCCCcCC
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFI--SDYPIVSIEDPFDQDD 308 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l--~~~~i~~iEdP~~~~D 308 (445)
+++|+++ +++.|++|+ |+.||.++++++ .+.+ +++++.|||||++++|
T Consensus 180 ~avR~~~------~~~~L~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~~~i~~iEeP~~~~d 229 (389)
T 3s5s_A 180 EAIHAAA------PGASLILDG-----------------------NGGLTAGEALAL-VAHARRLGADVALLEQPVPRDD 229 (389)
T ss_dssp HHHHHHC------TTCEEEEEC-----------------------TTCSCHHHHHHH-HHHHHHTTCEEEEEECCSCTTC
T ss_pred HHHHHhC------CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHhhCCCCeEEEECCCCccc
Confidence 7666654 578999999 467899999988 4568 8899999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.+
T Consensus 230 ~~~~~~l~~~~~--iPIa~dEs~-~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~-~~es~i 304 (389)
T 3s5s_A 230 WDGMKEVTRRAG--VDVAADESA-ASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGG-MVESVL 304 (389)
T ss_dssp HHHHHHHHHHSS--SCEEESTTC-SSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECC-SSCCHH
T ss_pred HHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecC-CcccHH
Confidence 999999999998 999999985 679999999999999999999999 999999999999999999998866 467766
Q ss_pred h--HHHHHHhhhc
Q 043137 389 T--FIADLSVGLA 399 (445)
Q Consensus 389 ~--~~~~la~a~~ 399 (445)
+ +.+||+.+++
T Consensus 305 g~aa~~hlaaa~p 317 (389)
T 3s5s_A 305 AMTASACFAAGLG 317 (389)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCC
Confidence 5 5566666544
No 65
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=2.5e-47 Score=388.89 Aligned_cols=303 Identities=20% Similarity=0.272 Sum_probs=227.0
Q ss_pred ceEEEEEEEEEEec------------------------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeec
Q 043137 2 AITITAVKARQIFD------------------------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELR 53 (445)
Q Consensus 2 ~mkI~~v~~~~v~~------------------------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~ 53 (445)
+||||+|+++.+-- +.+ +.+++|+|+||+|++|||++...
T Consensus 22 ~m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~------------ 89 (412)
T 3stp_A 22 SMKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTIGIGNAALA------------ 89 (412)
T ss_dssp -CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCEEEEEECSS------------
T ss_pred ccEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCEEEEeccCC------------
Confidence 49999999977731 111 23589999999999999965321
Q ss_pred cCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcC
Q 043137 54 DGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKK 133 (445)
Q Consensus 54 ~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g 133 (445)
...+...|++.|+|.|+|+||.+++++|+.|++.+. .+|+.++..+|+|||||||||+.||.+|
T Consensus 90 ----------~~~~~~~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~------~~g~~g~~~~A~saiD~ALwDl~gK~~g 153 (412)
T 3stp_A 90 ----------PSVVKKVIDDWYAPLVIGEDPFDYAYIWEKMYRRSH------AWGRKGIGMTAISAIDIAIWDLMGKLVG 153 (412)
T ss_dssp ----------HHHHHHHHHHTTHHHHTTSCGGGHHHHHHHHHHHTH------HHHSSTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ----------HHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHhh------hcCCcchHHHHHHHHHHHHHHHHhhhcC
Confidence 124455677789999999999999999999984321 1223445578999999999999999999
Q ss_pred CchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCccc
Q 043137 134 IPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNV 213 (445)
Q Consensus 134 ~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~ 213 (445)
+|||+||| |..++++|++... +..+ + ++..++++.+...++|+.+| .|+|....
T Consensus 154 ~Pv~~LLG---G~~r~~v~~y~s~-~~~~-------~---------~e~~~~~a~~~~~~Gf~~iK----ik~g~gp~-- 207 (412)
T 3stp_A 154 KPVFKLLG---GRTKDRIPVYYSK-LYAG-------S---------IEAMQKEAEEAMKGGYKAFK----SRFGYGPK-- 207 (412)
T ss_dssp CBHHHHHT---CCSSSSEEEEEEC-CCSC-------C---------HHHHHHHHHHHHTTTCSEEE----EECCCCGG--
T ss_pred CCHHHhcC---CCCCceEEEEEEe-cCCC-------C---------HHHHHHHHHHHHHcCCCEEE----EecccCcc--
Confidence 99999999 9877888875421 1100 1 12223444444334555443 34432100
Q ss_pred CCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhc
Q 043137 214 GDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFIS 293 (445)
Q Consensus 214 ~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~ 293 (445)
+|+ .+++.+.++++++|+++ | +++.|++|+ |++||.++++++ .+.++
T Consensus 208 --dg~--~~~~~die~v~avReav---G--~d~~L~vDa-----------------------N~~~~~~~Ai~~-~~~Le 254 (412)
T 3stp_A 208 --DGM--PGMRENLKRVEAVREVI---G--YDNDLMLEC-----------------------YMGWNLDYAKRM-LPKLA 254 (412)
T ss_dssp --GHH--HHHHHHHHHHHHHHHHH---C--SSSEEEEEC-----------------------TTCSCHHHHHHH-HHHHG
T ss_pred --ccc--chHHHHHHHHHHHHHHc---C--CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHHH
Confidence 011 11223455555555554 5 589999999 367899999987 56689
Q ss_pred cCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHc
Q 043137 294 DYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQA 373 (445)
Q Consensus 294 ~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~ 373 (445)
++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|+||||++++||||++++++++|+++
T Consensus 255 ~~~i~~iEeP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~a~ 331 (412)
T 3stp_A 255 PYEPRWLEEPVIADDVAGYAELNAMNI--VPISGGEHE-FSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAEAA 331 (412)
T ss_dssp GGCCSEEECCSCTTCHHHHHHHHHTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHH
T ss_pred hcCCCEEECCCCcccHHHHHHHHhCCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999988 999999985 67999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCChhhHHHHHHhhhc
Q 043137 374 GWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
|+++++++ +.++++||++|+.
T Consensus 332 gi~v~~h~-----~~aa~~hlaaA~~ 352 (412)
T 3stp_A 332 QIPVIPHA-----GQMHNYHLTMANT 352 (412)
T ss_dssp TCCBCCSS-----CSHHHHHHHHTCT
T ss_pred CCEEEecc-----HHHHHHHHHHhCC
Confidence 99986544 4567889887654
No 66
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=1.9e-46 Score=381.59 Aligned_cols=299 Identities=17% Similarity=0.153 Sum_probs=234.1
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+| +|++|||++.... .|.|++++..++...
T Consensus 7 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~G~GE~~~~~-------------~p~~~~et~~~~~~~ 72 (400)
T 3mwc_A 7 ARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLFGYGESAPFE-------------EPFYLGETLETTKVI 72 (400)
T ss_dssp CCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEEEEEEECCBS-------------STTSTTCBHHHHHHH
T ss_pred cEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeEEEEecccCC-------------CCccccCcHHHHHHH
Confidence 89999999888532 22 3468999999 9999999654311 134778888888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccC-----
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG----- 145 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G----- 145 (445)
|++.++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |
T Consensus 73 i~~~l~p~liG~d~~~~e~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pl~~LLG---G~~~~~ 137 (400)
T 3mwc_A 73 LKNHLLPMILGKEPLSIEEFNHLIKNGIR----------G--NHFARCGVENAYWDLIAKKNKISLKAMIE---KKMKNL 137 (400)
T ss_dssp HHHTHHHHHTTCCCSSHHHHHHHHHHSCC----------S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHH---HHHHHT
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHhc----------C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---Cccccc
Confidence 98889999999999999999999983111 1 14699999999999999999999999999 7
Q ss_pred -------CCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCC
Q 043137 146 -------NKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGG 218 (445)
Q Consensus 146 -------~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~ 218 (445)
..++++|++.. + |... .. .++...+++.+...++|+++| .|++
T Consensus 138 ~~~~~~~~~r~~v~~~~s--~--g~~~--~~---------~~e~~~~~a~~~~~~G~~~iK----lKv~----------- 187 (400)
T 3mwc_A 138 GVKQEYLASNNYIESGAA--L--GIPE--DG---------RIETLIHQVEESLQEGYRRIK----IKIK----------- 187 (400)
T ss_dssp TCCGGGGCBCSEEEBCEE--E--CCCT--TC---------CHHHHHHHHHHHHHHTCSCEE----EECB-----------
T ss_pred ccccccccCCCeEEeeEE--e--ccCC--CC---------CHHHHHHHHHHHHHcCCCEEE----EEeC-----------
Confidence 66777877442 2 2100 00 012234445444444565543 3321
Q ss_pred CCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCee
Q 043137 219 FAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIV 298 (445)
Q Consensus 219 ~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~ 298 (445)
+ +.+.++++++|+++ | +++.|++|+ |++||.++ +++ .+.++++++.
T Consensus 188 --~--~~d~~~v~avR~a~---G--~~~~L~vDa-----------------------N~~w~~~~-~~~-~~~l~~~~i~ 233 (400)
T 3mwc_A 188 --P--GWDVEPLQETRRAV---G--DHFPLWTDA-----------------------NSSFELDQ-WET-FKAMDAAKCL 233 (400)
T ss_dssp --T--TBSHHHHHHHHHHH---C--TTSCEEEEC-----------------------TTCCCGGG-HHH-HHHHGGGCCS
T ss_pred --c--chHHHHHHHHHHhc---C--CCCEEEEeC-----------------------CCCCCHHH-HHH-HHHHHhcCCC
Confidence 1 24577888777776 5 589999999 36788888 877 4678999999
Q ss_pred eEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEE
Q 043137 299 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVM 378 (445)
Q Consensus 299 ~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~ 378 (445)
|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++
T Consensus 234 ~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~ 310 (400)
T 3mwc_A 234 FHEQPLHYEALLDLKELGERIE--TPICLDESL-ISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLW 310 (400)
T ss_dssp CEESCSCTTCHHHHHHHHHHSS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEE
T ss_pred EEeCCCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999998 999999985 5699999999999999999999999999999999999999999997
Q ss_pred ecCCCCCChhhHHHHHHhhh
Q 043137 379 ASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 379 ~~~~~~et~~~~~~~la~a~ 398 (445)
+++ +.|+.++.++.++++.
T Consensus 311 ~~~-~~es~i~~aa~~hlaa 329 (400)
T 3mwc_A 311 GGT-MPESGLGARFLISLAS 329 (400)
T ss_dssp ECC-SCCCHHHHHHHHHHTT
T ss_pred ecC-CCCCHHHHHHHHHHHc
Confidence 766 5788887666666654
No 67
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=5.4e-47 Score=383.32 Aligned_cols=297 Identities=13% Similarity=0.178 Sum_probs=222.5
Q ss_pred CceEEEEEEEEEEec--------CCC------CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIFD--------SRG------NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~--------~~g------~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|.|||++|+++.+.. +.+ +..++|+|+||+|++|||++.... +.|++++...
T Consensus 1 m~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~~~~~~~~~~ 66 (378)
T 3eez_A 1 MSLKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWG--------------HTYVPAHGPG 66 (378)
T ss_dssp --CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSC--------------SSSSSCCHHH
T ss_pred CCcEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCCEEEecccCCC--------------CccCCCcHHH
Confidence 789999999988842 223 145899999999999999653210 1255555666
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+.+.++ .++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 67 ~~~~l~-~l~p~l~G~d~~~~~~~~~~l~~~~~----------g--~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~ 130 (378)
T 3eez_A 67 IRAGIE-TMAPFVLGLDPRRLLDVERAMDIALP----------G--HLYAKSPIDMACWDIAGQAAGLPIADLMG---GG 130 (378)
T ss_dssp HHHHHH-HHHHHHTTSCTTCHHHHHHHHHHHSS----------S--CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC
T ss_pred HHHHHH-HHHHHhcCCCcCCHHHHHHHHHHHhc----------C--cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 666675 59999999999999999999984332 1 15799999999999999999999999999 98
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
.++++|++. +++++ + ++...+++.+...++|+.+| .|+|. +.
T Consensus 131 ~r~~v~~~~--~~~~~-------~---------~e~~~~~a~~~~~~G~~~iK----iK~G~-------------~~--- 172 (378)
T 3eez_A 131 SRTPRPIAS--SVGAK-------S---------VEETRAVIDRYRQRGYVAHS----VKIGG-------------DV--- 172 (378)
T ss_dssp CCSCEEBBC--CBCSC-------C---------HHHHHHHHHHHHHTTCCEEE----EECCS-------------CH---
T ss_pred CCCeEEEEE--EecCC-------C---------HHHHHHHHHHHHhCCCCEEE----eccCC-------------CH---
Confidence 777888743 22111 1 11223333333333454433 34331 12
Q ss_pred HHHHHHHHHHHHH-hCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCC
Q 043137 227 KEGLELLNTAIAK-AGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFD 305 (445)
Q Consensus 227 ~~~l~~l~~av~~-~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~ 305 (445)
.+.++.+ +++|+ +| +++.|++|+ |++||.++++++ .+.++++++ |||||++
T Consensus 173 ~~d~~~v-~avR~a~g--~~~~l~vDa-----------------------n~~~~~~~a~~~-~~~l~~~~i-~iEqP~~ 224 (378)
T 3eez_A 173 ERDIARI-RDVEDIRE--PGEIVLYDV-----------------------NRGWTRQQALRV-MRATEDLHV-MFEQPGE 224 (378)
T ss_dssp HHHHHHH-HHHTTSCC--TTCEEEEEC-----------------------TTCCCHHHHHHH-HHHTGGGTC-CEECCSS
T ss_pred HHHHHHH-HHHHHHcC--CCceEEEEC-----------------------CCCCCHHHHHHH-HHHhccCCe-EEecCCC
Confidence 3334444 34444 45 589999999 367899999987 566899999 9999998
Q ss_pred cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 306 QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||+|++++++++|+++|++++++|+ .|
T Consensus 225 --~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~-~e 298 (378)
T 3eez_A 225 --TLDDIAAIRPLHS--APVSVDECL-VTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMAT-GG 298 (378)
T ss_dssp --SHHHHHHTGGGCC--CCEEECTTC-CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECS-SC
T ss_pred --CHHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCC-CC
Confidence 8999999999998 999999985 67999999999999999999999999999999999999999999998884 67
Q ss_pred ChhhHH--HHHHhhhc
Q 043137 386 TEDTFI--ADLSVGLA 399 (445)
Q Consensus 386 t~~~~~--~~la~a~~ 399 (445)
+.++.. +||+.++.
T Consensus 299 s~i~~aa~~hlaaa~~ 314 (378)
T 3eez_A 299 SVLADAEALHLAATIP 314 (378)
T ss_dssp SHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHhCC
Confidence 876644 55555543
No 68
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=2.1e-47 Score=387.71 Aligned_cols=305 Identities=16% Similarity=0.190 Sum_probs=225.4
Q ss_pred ceEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.|||++|+++.+..+ .+ +..++|+|+||+|++|||++...+ .|++++...+..
T Consensus 26 ~mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~~e~~~~~~~ 90 (393)
T 3u9i_A 26 PTTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAAPFP---------------AFNGETQDMAHA 90 (393)
T ss_dssp TTBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCEEEEEECCCH---------------HHHSCCHHHHHH
T ss_pred CcEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCEEEEEeeCCC---------------CcCcCCHHHHHH
Confidence 389999999887532 22 246899999999999999754311 245666777776
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.++ .++|.|+|+||.+++++|+.|. ... ....+|++|||+||||+.||.+|+|||+||| |.. +
T Consensus 91 ~l~-~l~p~l~G~d~~~~~~~~~~l~-~~~-----------~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~ 153 (393)
T 3u9i_A 91 AIL-AARSLVEGADVREWRRIALALP-ALP-----------GMTGSARCAIETAILDALTRRARLPLWAFFG---GAA-T 153 (393)
T ss_dssp HHH-HTHHHHTTSBGGGHHHHHHHGG-GST-----------TCCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-S
T ss_pred HHH-HHHHHhcCCCcCCHHHHHHHHH-Hhc-----------CccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-C
Confidence 674 6999999999999999998887 321 0125799999999999999999999999999 875 5
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|++. .++.+ .++..++++.+...++|+++| .|+|...... .....++.+.++
T Consensus 154 ~v~~~~--t~~~~----------------~~e~~~~~a~~~~~~Gf~~iK----lKvg~~~~~~----~~~~~~~~di~~ 207 (393)
T 3u9i_A 154 SLETDV--TITTG----------------SVTAAARAAQAIVARGVTTIK----IKIGAGDPDA----TTIRTMEHDLAR 207 (393)
T ss_dssp EEECCE--EEC-------------------CHHHHHHHHHHHTTTCCEEE----EECC-----------CHHHHHHHHHH
T ss_pred ceEEEE--EecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEeCCCcccc----cccccHHHHHHH
Confidence 677643 22111 112334455554445665554 4544210000 000002233444
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhh--ccCCeeeEECCCCcC
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFI--SDYPIVSIEDPFDQD 307 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l--~~~~i~~iEdP~~~~ 307 (445)
++++|+++ +++.|++|+ |+.||.++++++ .+.+ ++|++.|||||++++
T Consensus 208 v~avR~a~------~d~~L~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~~~i~~iEeP~~~~ 257 (393)
T 3u9i_A 208 IVAIRDVA------PTARLILDG-----------------------NCGYTAPDALRL-LDMLGVHGIVPALFEQPVAKD 257 (393)
T ss_dssp HHHHHHHS------TTSEEEEEC-----------------------CSCCCHHHHHHH-HHTTTTTTCCCSEEECCSCTT
T ss_pred HHHHHHHC------CCCeEEEEc-----------------------cCCCCHHHHHHH-HHHHhhCCCCeEEEECCCCCC
Confidence 54444443 578999999 467899999987 4668 889999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|||+++ ||||++++++++|+++|+++++++ +.|+.
T Consensus 258 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~-~~es~ 332 (393)
T 3u9i_A 258 DEEGLRRLTATRR--VPVAADESV-ASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGG-MVESL 332 (393)
T ss_dssp CTTHHHHHHHTCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECC-SSCCH
T ss_pred cHHHHHHHHhhCC--CcEEeCCcC-CCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecC-CcccH
Confidence 9999999999998 999999985 679999999999999999999999 999999999999999999998766 56886
Q ss_pred hh--HHHHHHhhhc
Q 043137 388 DT--FIADLSVGLA 399 (445)
Q Consensus 388 ~~--~~~~la~a~~ 399 (445)
++ +.+||+.+++
T Consensus 333 ig~aa~~hlaaa~p 346 (393)
T 3u9i_A 333 LAMTVSACFAAGQG 346 (393)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCC
Confidence 65 4556655543
No 69
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=7.8e-47 Score=383.02 Aligned_cols=295 Identities=15% Similarity=0.198 Sum_probs=230.6
Q ss_pred eEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+. .+.+ +..++|+|+||+|++|||++...+ .+.|++++..++...
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~p~~~~e~~~~~~~~ 67 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIEGWSECVALA-------------EPTYTEECTDTAWVM 67 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEECCCS-------------STTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCEEEEecccCC-------------CCccccccHHHHHHH
Confidence 899999998774 2333 356899999999999999653211 123677788888888
Q ss_pred HHHhHhhhhc-------CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 71 VNAIIGPALA-------GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 71 i~~~l~p~Li-------G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
+++.+.|.|+ |+++.+++.+++.|. .+. + ..+|++||||||||+.||.+|+|||+|||
T Consensus 68 l~~~l~p~l~~~~~~~~G~~~~~~~~~~~~~~-~~~----------g--~~~A~said~ALwDl~gk~~g~Pl~~LLG-- 132 (388)
T 3qld_A 68 LVHHLVPRFARWLRAASQDQDVDPRTVCEALR-DVR----------G--NRMSVAAIEMAVWDWYAARTGQPLVGLLG-- 132 (388)
T ss_dssp HHHTHHHHHHHHHTSGGGSSCCCGGGGGGGGT-TCC----------S--CHHHHHHHHHHHHHHHHHHHTCCHHHHTT--
T ss_pred HHHHHHHHHhhhhcccCCCCccCHHHHHHHHH-Hcc----------C--cHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 9889999999 999999999887765 332 1 25799999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 223 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 223 (445)
| .++++|++. +++.+ + .++...+++.+...++|+++| .|+| +
T Consensus 133 -g-~r~~v~~~~--~~~~~-------~--------~~e~~~~~~~~~~~~G~~~~K----~Kv~-------------~-- 174 (388)
T 3qld_A 133 -G-GRDRVEVSA--TLGMS-------E--------SLDVLIQSVDAAVEQGFRRVK----LKIA-------------P-- 174 (388)
T ss_dssp -C-CCSEEEBEE--EECCC-------S--------CHHHHHHHHHHHHHTTCSEEE----EECB-------------T--
T ss_pred -C-CCCeEEEeE--EecCC-------C--------CHHHHHHHHHHHHHhCCCeEE----EEeC-------------c--
Confidence 8 467787744 33211 0 012223444444444555543 3322 1
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.++++++|+++ +++.|++|+ |+.||.+++++ + +.+++|++.|||||
T Consensus 175 ~~d~~~v~avR~~~------~~~~l~vDa-----------------------N~~~~~~~A~~-~-~~l~~~~i~~iEeP 223 (388)
T 3qld_A 175 GRDRAAIKAVRLRY------PDLAIAADA-----------------------NGSYRPEDAPV-L-RQLDAYDLQFIEQP 223 (388)
T ss_dssp TBSHHHHHHHHHHC------TTSEEEEEC-----------------------TTCCCGGGHHH-H-HHGGGGCCSCEECC
T ss_pred HHHHHHHHHHHHHC------CCCeEEEEC-----------------------CCCCChHHHHH-H-HHHhhCCCcEEECC
Confidence 23477777776664 579999999 36788889875 4 56899999999999
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
++++|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|++++++| +
T Consensus 224 ~~~~d~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~ 299 (388)
T 3qld_A 224 LPEDDWFDLAKLQASLR--TPVCLDESV-RSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG-M 299 (388)
T ss_dssp SCTTCHHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-C
T ss_pred CCcccHHHHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC-c
Confidence 99999999999999998 999999985 6699999999999999999999999999999999999999999998877 5
Q ss_pred CCChhhHHHHHHhhh
Q 043137 384 GETEDTFIADLSVGL 398 (445)
Q Consensus 384 ~et~~~~~~~la~a~ 398 (445)
.|+.++.+++++++.
T Consensus 300 ~es~i~~aa~~~laa 314 (388)
T 3qld_A 300 YETGVGRVHGLIAAA 314 (388)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHc
Confidence 688888777777764
No 70
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.7e-46 Score=379.19 Aligned_cols=304 Identities=18% Similarity=0.254 Sum_probs=234.1
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEec-cCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAV-PSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~-~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
|||++|+++.+.. +.+ +++++|+|+| +|++|||++ |.+ +++|.+++...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~G~GE~~~~~--------------~~~~~~e~~~~~~~ 65 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVG--------------GPTWGSESAETIKV 65 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCST--------------TTTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEEEEEEeccCC--------------CCcccCCCHHHHHH
Confidence 8999999987732 222 3468999999 999999965 332 12366777888888
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.+++.+.|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 66 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~----------~--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~ 130 (370)
T 1nu5_A 66 IIDNYLAPLLVGKDASNLSQARVLMDRAVT----------G--NLSAKAAIDIALHDLKARALNLSIADLIG---GTMRT 130 (370)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHCS----------S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCSCS
T ss_pred HHHHhhHHHHcCCCcccHHHHHHHHHHHhc----------C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCcCC
Confidence 898889999999999999999999983221 1 25799999999999999999999999999 97777
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
++|++ .+++++ +. +..++++.+... ++|+.+| .|.|. .+++.+.+
T Consensus 131 ~v~~~--~~~~~~-------~~---------e~~~~~a~~~~~~~Gf~~iK----ik~g~------------~~~~~~~e 176 (370)
T 1nu5_A 131 SIPIA--WTLASG-------DT---------ARDIDSALEMIETRRHNRFK----VKLGA------------RTPAQDLE 176 (370)
T ss_dssp EEEBC--EEECSS-------CH---------HHHHHHHHHHHHTTSCSEEE----EECSS------------SCHHHHHH
T ss_pred ceEee--EEecCC-------CH---------HHHHHHHHHHHHhCCccEEE----EecCC------------CChHHHHH
Confidence 88875 333222 11 122334444333 3454433 33331 12233455
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
.++++|+++ | +++.|++|+| ++||.++++++ .+.++++++.|||||++++|
T Consensus 177 ~v~avr~a~---g--~~~~l~vDan-----------------------~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~~ 227 (370)
T 1nu5_A 177 HIRSIVKAV---G--DRASVRVDVN-----------------------QGWDEQTASIW-IPRLEEAGVELVEQPVPRAN 227 (370)
T ss_dssp HHHHHHHHH---G--GGCEEEEECT-----------------------TCCCHHHHHHH-HHHHHHHTCCEEECCSCTTC
T ss_pred HHHHHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHH-HHHHHhcCcceEeCCCCccc
Confidence 666666555 5 4799999993 57888999987 45789999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||+|++++++++|+++|++++++| +.|+.+
T Consensus 228 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i 303 (370)
T 1nu5_A 228 FGALRRLTEQNG--VAILADESL-SSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDSTV 303 (370)
T ss_dssp HHHHHHHHHHCS--SEEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHH
T ss_pred HHHHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC-CcchHH
Confidence 999999999998 999999985 7799999999999999999999999999999999999999999998877 578887
Q ss_pred hHHHHHHhhhcCCcc
Q 043137 389 TFIADLSVGLATGQI 403 (445)
Q Consensus 389 ~~~~~la~a~~~~~~ 403 (445)
+..+.++++...+.+
T Consensus 304 ~~aa~~hlaaa~~~~ 318 (370)
T 1nu5_A 304 GTAAALHVYATLPSL 318 (370)
T ss_dssp HHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHhcCCCC
Confidence 765555555434433
No 71
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=4.2e-47 Score=386.24 Aligned_cols=295 Identities=19% Similarity=0.210 Sum_probs=231.4
Q ss_pred ceEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.|||++|+++.+.. +.+ +++++|+|+||+|++|||+++..+ .++|.++++.++..
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~ 85 (393)
T 1wuf_A 19 HMYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEAFP-------------LPDYTEETLSSAIL 85 (393)
T ss_dssp CEECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECCCS-------------STTSSSCCHHHHHH
T ss_pred cCEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCEEEEEeecCC-------------CCcccCCCHHHHHH
Confidence 49999999987732 222 356899999999999999765421 12377778888888
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.+++.++|.|+|+|+.+++.+|+.|. .+++ +.+|++|||+||||+.||.+|+|||+||| | .++
T Consensus 86 ~i~~~l~p~l~G~d~~~~~~l~~~l~-~~~g------------~~~a~~aid~AlwDl~gk~~g~Pl~~lLG---g-~~~ 148 (393)
T 1wuf_A 86 IIKEQLLPLLAQRKIRKPEEIQELFS-WIQG------------NEMAKAAVELAVWDAFAKMEKRSLAKMIG---A-TKE 148 (393)
T ss_dssp HHHHTTHHHHHHCEESSTTHHHHHHT-TSCS------------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---C-CCS
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHH-HccC------------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCC
Confidence 88888999999999999999998887 4321 25799999999999999999999999999 8 567
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|+|+. ++.+ . +. ++..+++.+...++|+++| .|+| + +.+.++
T Consensus 149 ~v~~~~~--~g~~----~--~~---------e~~~~~a~~~~~~G~~~~K----iKvg-------------~--~~d~~~ 192 (393)
T 1wuf_A 149 SIKVGVS--IGLQ----Q--NV---------ETLLQLVNQYVDQGYERVK----LKIA-------------P--NKDIQF 192 (393)
T ss_dssp EEEBCEE--ECCC----S--CH---------HHHHHHHHHHHHHTCCEEE----EECB-------------T--TBSHHH
T ss_pred cceeeEE--eCCC----C--CH---------HHHHHHHHHHHHHhhHhhe----eccC-------------h--HHHHHH
Confidence 7888653 2111 0 11 2224455555555565554 2322 1 234566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ +++.|++|+| +.||.+++ ++ .+.+++|++.|||||++++|+
T Consensus 193 v~avr~a~------~~~~l~vDaN-----------------------~~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d~ 241 (393)
T 1wuf_A 193 VEAVRKSF------PKLSLMADAN-----------------------SAYNREDF-LL-LKELDQYDLEMIEQPFGTKDF 241 (393)
T ss_dssp HHHHHTTC------TTSEEEEECT-----------------------TCCCGGGH-HH-HHTTGGGTCSEEECCSCSSCS
T ss_pred HHHHHHHc------CCCEEEEECC-----------------------CCCCHHHH-HH-HHHHHhCCCeEEECCCCCcCH
Confidence 65554432 5899999993 56788888 77 467899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
++|++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|+.++
T Consensus 242 ~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~ 317 (393)
T 1wuf_A 242 VDHAWLQKQLK--TRICLDENI-RSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGG-MLEAGVG 317 (393)
T ss_dssp HHHHHHHTTCS--SEEEECTTC-CSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHH
T ss_pred HHHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecC-CcccHHH
Confidence 99999999988 999999985 6799999999999999999999999999999999999999999998877 5688877
Q ss_pred HHHHHHhh
Q 043137 390 FIADLSVG 397 (445)
Q Consensus 390 ~~~~la~a 397 (445)
.+++++++
T Consensus 318 ~aa~~hla 325 (393)
T 1wuf_A 318 RAHNIALA 325 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666555
No 72
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=1.2e-46 Score=380.28 Aligned_cols=303 Identities=21% Similarity=0.279 Sum_probs=235.1
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+||+|++|||+++.. +.|++++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~GE~~~~---------------~~~~~~~~~~~~~~ 65 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVAD---------------DHVTGESWESTFHT 65 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHHH
Confidence 8999999887732 222 35789999999999999976532 12456667888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+||.+++.+|+.|. .... ...+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 66 i~~~l~~~l~g~d~~~~~~~~~~l~-~~~~-----------~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~ 130 (369)
T 2p8b_A 66 LKHTLTPALIGQNPMNIEKIHDMMD-NTIY-----------GVPTAKAAIDIACFDIMGKKLNQPVYQLIG---GRYHEE 130 (369)
T ss_dssp HHHTHHHHHTTCCTTCHHHHHHHHH-HHCS-----------CCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCCCSC
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHH-HHhc-----------CChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCc
Confidence 8888999999999999999999998 3321 125799999999999999999999999999 876677
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. .++++ +.+ ...+++.+...++|+.+| .|.| . +.+.+.+.+
T Consensus 131 v~~~~--~i~~~-------~~~---------~~~~~a~~~~~~Gf~~iK----ik~g-------~------~~~~~~e~v 175 (369)
T 2p8b_A 131 FPVTH--VLSIA-------DPE---------NMAEEAASMIQKGYQSFK----MKVG-------T------NVKEDVKRI 175 (369)
T ss_dssp EECCE--EECSC-------CHH---------HHHHHHHHHHHTTCCEEE----EECC-------S------CHHHHHHHH
T ss_pred eeeeE--EecCC-------ChH---------HHHHHHHHHHHcCcCEEE----EEeC-------C------CHHHHHHHH
Confidence 88743 33322 111 223444444444454443 3322 1 223345566
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHH-HHHHHhhccCCeeeEECCCCcCCH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALK-DLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai-~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
+++|+++ | +++.|++|+| ++||.++++ ++ .+.++++++.|||||++++|+
T Consensus 176 ~avr~a~---g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~~l~~~~i~~iEqP~~~~d~ 226 (369)
T 2p8b_A 176 EAVRERV---G--NDIAIRVDVN-----------------------QGWKNSANTLTA-LRSLGHLNIDWIEQPVIADDI 226 (369)
T ss_dssp HHHHHHH---C--TTSEEEEECT-----------------------TTTBSHHHHHHH-HHTSTTSCCSCEECCBCTTCH
T ss_pred HHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHHhCCCcEEECCCCcccH
Confidence 6555554 5 5899999993 567888998 88 456899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. +++++++++++.+++|+++||++++||+|++++++++|+++|++++++| +.|+.++
T Consensus 227 ~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~ 302 (369)
T 2p8b_A 227 DAMAHIRSKTD--LPLMIDEGL-KSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS-MVESSVA 302 (369)
T ss_dssp HHHHHHHHTCC--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-SSCCHHH
T ss_pred HHHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC-CCccHHH
Confidence 99999999988 999999985 7799999999999999999999999999999999999999999998877 5789888
Q ss_pred HHHHHHhhhcCCcc
Q 043137 390 FIADLSVGLATGQI 403 (445)
Q Consensus 390 ~~~~la~a~~~~~~ 403 (445)
.+++++++...+..
T Consensus 303 ~~a~~~laa~~~~~ 316 (369)
T 2p8b_A 303 SSAGFHVAFSKKII 316 (369)
T ss_dssp HHHHHHHHTTCTTE
T ss_pred HHHHHHHHHcCCCC
Confidence 77776666544433
No 73
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=1.5e-46 Score=385.75 Aligned_cols=315 Identities=14% Similarity=0.158 Sum_probs=222.8
Q ss_pred ceEEEEEEEEEEecC-------CC--C---ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS-------RG--N---PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~-------~g--~---~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
+|||++|+++.+..+ .| . ..++|+|+||+|++|+|+++. + .....
T Consensus 22 ~mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g--------------------~---~~v~~ 78 (441)
T 3vc5_A 22 SMLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGITGLGETYG--------------------D---LAHLE 78 (441)
T ss_dssp -CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCCEEEEEEEC--------------------C---HHHHH
T ss_pred CcEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCCEEEEeCCC--------------------h---HHHHH
Confidence 589999999988533 11 1 237999999999999997642 1 12233
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccc------cchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQK------LGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~------~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
.| +.++|.|+|+||.+++++|+.|++.+.+....-.+|..+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 79 ~i-~~l~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG-- 155 (441)
T 3vc5_A 79 QV-RAAAARLPGLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLG-- 155 (441)
T ss_dssp HH-HHHHHTCTTSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT--
T ss_pred HH-HHHHHHhCCCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 45 469999999999999999999995432210000011222 334799999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPN 222 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 222 (445)
|..++++|++.|.......+ ++. .......+..+++.++++.+...+ +|+++| .|.|. .+
T Consensus 156 -G~~rd~v~~~a~~~~~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~~ 216 (441)
T 3vc5_A 156 -GKVRDAVPYSAYLFYKWAGH-PGK-PEDRFGPALDPDGIVAQARLLIGEYGFRSIK----LKGGV------------FP 216 (441)
T ss_dssp -CCSSSEEEBCEEEECBCSBC-TTS-CBCTTCCBCSHHHHHHHHHHHHHHHCCSSEE----EECSS------------SC
T ss_pred -CCCCCeEEEEEeeccccccC-CCc-cccccccCCCHHHHHHHHHHHHHhcCCCEEE----EccCC------------CC
Confidence 98888999865542110000 000 000000001122334445444332 565543 44331 11
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
.+.+.++++++|+++ +++.|++|+ |+.||.++++++ .+.++++ +.||||
T Consensus 217 ~~~Di~rv~avRea~------pd~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iEe 265 (441)
T 3vc5_A 217 PEQEAEAIQALRDAF------PGLPLRLDP-----------------------NAAWTVETSIRV-GRALDGV-LEYLED 265 (441)
T ss_dssp HHHHHHHHHHHHHHS------TTCCEEEEC-----------------------TTCSCHHHHHHH-HHHTTTT-CSEEEC
T ss_pred HHHHHHHHHHHHHhC------CCCcEeccC-----------------------CCCCCHHHHHHH-HHHHHHH-HHHhhc
Confidence 233445555555443 589999999 478999999987 4568999 999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++ |++++++|+++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |.
T Consensus 266 P~~--~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia~lA~~~gv~v~~-h~ 339 (441)
T 3vc5_A 266 PTP--GIDGMARVAAEVP--MPLATNMCV-VTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIATLCATFGIELSM-HS 339 (441)
T ss_dssp CSS--SHHHHHHHHTTSS--SCEEESSSC-CSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE-CC
T ss_pred cCC--CHHHHHHHHhcCC--CCEEeCCCC-CCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHHHHHHHcCCEEEe-cC
Confidence 985 8999999999998 999999985 67999999999999999999999999999999999999999999755 55
Q ss_pred CCCChhhH--HHHHHhhh
Q 043137 383 SGETEDTF--IADLSVGL 398 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~ 398 (445)
+.++.++. ++||++++
T Consensus 340 ~~e~~i~~aa~~hlaaa~ 357 (441)
T 3vc5_A 340 NSHLGISLAAMTHLAAAT 357 (441)
T ss_dssp CSCCHHHHHHHHHHHHTC
T ss_pred CcccHHHHHHHHHHHHhC
Confidence 67777664 45666554
No 74
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=3.6e-46 Score=380.04 Aligned_cols=301 Identities=20% Similarity=0.257 Sum_probs=231.1
Q ss_pred CceEEEEEEEEEEecCC--------C----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIFDSR--------G----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~--------g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
|+|||++|+++.+..+. + +++++|+|+||+|++|||++...+ + +|++++..++.
T Consensus 1 m~MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------~---~~~~~~~~~~~ 66 (397)
T 2qde_A 1 MSLKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLVGIADAGDTS-----------S---WYRGETQDSIT 66 (397)
T ss_dssp --CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCEEEEECCCCC-----------T---TTTCCCHHHHH
T ss_pred CCCEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCCEEEEEEeccc-----------C---ccCCCCHHHHH
Confidence 78999999998885331 2 357899999999999999764311 0 25677778888
Q ss_pred HHHHHhHhh-hhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC
Q 043137 69 SNVNAIIGP-ALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK 147 (445)
Q Consensus 69 ~~i~~~l~p-~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~ 147 (445)
..+++.++| .|+|+||.+++.+|+.|. ... . + ..+|++|||+||||+.||.+|+|||+||| |..
T Consensus 67 ~~i~~~l~~~~l~G~d~~~~~~l~~~l~-~~~---~------~--~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~ 131 (397)
T 2qde_A 67 SMICDFFAPKVLLGEDPTKIEKIVGRMD-ILT---R------D--NNQAKATVDFALHDLVGKRFGVPVYQLLG---GKT 131 (397)
T ss_dssp HHHHHTHHHHTTTTCCTTCHHHHHHHHH-HHC---S------S--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCS
T ss_pred HHHHHhhhhHhhcCCChHhHHHHHHHhh-hhh---c------c--chhHHHHHHHHHHHHHHHHhCCcHHHHhC---CCC
Confidence 888888999 999999999999999885 321 1 1 36899999999999999999999999999 976
Q ss_pred cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChH
Q 043137 148 NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENK 227 (445)
Q Consensus 148 ~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 227 (445)
++.+|++ .+++.+ +. +...+++.+...++|+.+| .|.|. +++.+.
T Consensus 132 ~~~vp~~--~~~g~~-------~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~~~ 176 (397)
T 2qde_A 132 IERIPLG--LVLGAG-------EP---------EAVAEEALAVLREGFHFVK----LKAGG-------------PLKADI 176 (397)
T ss_dssp CSSEEBC--EECCCS-------CH---------HHHHHHHHHHHHHTCSCEE----EECCS-------------CHHHHH
T ss_pred CCCcceE--EECCCC-------CH---------HHHHHHHHHHHHhhhhhee----ecccC-------------CHHHHH
Confidence 6677764 333111 11 1223445444444554443 33321 223345
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcC
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~ 307 (445)
+.++++|+++ | +++.|++|+| ++||.++++++ .+.++++++.|||||++++
T Consensus 177 e~v~avR~a~---g--~d~~l~vDan-----------------------~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~ 227 (397)
T 2qde_A 177 AMVAEVRRAV---G--DDVDLFIDIN-----------------------GAWTYDQALTT-IRALEKYNLSKIEQPLPAW 227 (397)
T ss_dssp HHHHHHHHHH---C--TTSCEEEECT-----------------------TCCCHHHHHHH-HHHHGGGCCSCEECCSCTT
T ss_pred HHHHHHHHhh---C--CCCEEEEECC-----------------------CCCCHHHHHHH-HHHHHhCCCCEEECCCChh
Confidence 5565555554 5 5899999993 57889999988 5578999999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|+++++++ +.|+.
T Consensus 228 ~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~ 303 (397)
T 2qde_A 228 DLDGMARLRGKVA--TPIYADESA-QELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC-MVGSG 303 (397)
T ss_dssp CHHHHHHHHTTCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC-CSCCH
T ss_pred hHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEec-CcccH
Confidence 9999999999988 999999985 5699999999999999999999999999999999999999999987765 46887
Q ss_pred hhH--HHHHHhhh
Q 043137 388 DTF--IADLSVGL 398 (445)
Q Consensus 388 ~~~--~~~la~a~ 398 (445)
++. .+||+.++
T Consensus 304 ig~aa~~hlaa~~ 316 (397)
T 2qde_A 304 LEASPAAHLLAAN 316 (397)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 665 45555544
No 75
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=3.6e-46 Score=378.03 Aligned_cols=276 Identities=20% Similarity=0.212 Sum_probs=209.7
Q ss_pred ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhc
Q 043137 20 PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLD 99 (445)
Q Consensus 20 ~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~ 99 (445)
.+++|+|+||+|++|||++..+ ..+...+++.|+|.|+|+||.+++++|+.|++...
T Consensus 59 ~~v~V~v~td~G~~G~Ge~~~g-----------------------~~~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~~ 115 (404)
T 3ekg_A 59 GTLVVEIEASDGNVGFAVTTGG-----------------------EPAAYIVEKHLARFLEGARVTDIERIWDQMYNSTL 115 (404)
T ss_dssp CEEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHG
T ss_pred cEEEEEEEECCCCEEEEeCCCc-----------------------HHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhh
Confidence 3489999999999999875421 22344677889999999999999999999984321
Q ss_pred cCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccC
Q 043137 100 GTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPV 179 (445)
Q Consensus 100 ~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~ 179 (445)
++|++++..+|+|||||||||+.||.+|+|||+||| |+.++++|+|. + |. .
T Consensus 116 ------~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~y~--~--g~-------~--------- 166 (404)
T 3ekg_A 116 ------YYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLG---GAVRDELQFYA--T--GA-------R--------- 166 (404)
T ss_dssp ------GGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSEEEEEE--E--SS-------C---------
T ss_pred ------hcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcC---CCCCCeeEEec--C--CC-------C---------
Confidence 122344456799999999999999999999999999 98888888743 2 11 0
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEecccccccc
Q 043137 180 GASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYG 259 (445)
Q Consensus 180 ~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~ 259 (445)
.+.+.+ ++|+++| .|+|... . .| ..+++.+.++++++|+++ | +++.|++|+
T Consensus 167 ----~~~~~~---~Gf~~~K----~Kv~~g~-~---~g--~~~~~~di~~v~avRea~---G--~~~~L~vDa------- 217 (404)
T 3ekg_A 167 ----PDLAQK---MGFIGGK----MPLHHGP-S---EG--EEGLKKNLEELATMRERV---G--PDFWLMFDC------- 217 (404)
T ss_dssp ----HHHHHH---TTCSEEE----EECCCCG-G---GH--HHHHHHHHHHHHHHHHHH---C--SSSEEEEEC-------
T ss_pred ----HHHHHH---cCCCEEE----EecCCCC-c---cc--cccHHHHHHHHHHHHHHh---C--CCCeEEecC-------
Confidence 112222 2455443 3432100 0 00 011233455666666555 6 689999999
Q ss_pred CCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHH
Q 043137 260 SDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVE 339 (445)
Q Consensus 260 ~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~ 339 (445)
|+.||.++|+++ .+.+++|++.|||||++++|++++++|+++++.++||++||+. .++++++
T Consensus 218 ----------------N~~w~~~~A~~~-~~~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~~-~~~~~~~ 279 (404)
T 3ekg_A 218 ----------------WMSLDLNYATRL-ARGAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEHE-ATRWGFR 279 (404)
T ss_dssp ----------------TTCCCHHHHHHH-HHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CHHHHHH
T ss_pred ----------------CCCCCHHHHHHH-HHHHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCcc-CCHHHHH
Confidence 467899999988 5568999999999999999999999999998844569999985 4599999
Q ss_pred HHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhc
Q 043137 340 KAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 340 ~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
++++.+++|++|+|++++||||++++++++|+++|+++++ |.++ .+.+||++++.
T Consensus 280 ~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~-h~~~----~a~~hl~aa~p 334 (404)
T 3ekg_A 280 MLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVP-HGSS----VYSYHFVATRQ 334 (404)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECC-CCCT----HHHHHHHTTCT
T ss_pred HHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEe-cCcH----HHHHHHHHhCC
Confidence 9999999999999999999999999999999999999854 5332 36788887764
No 76
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=6.7e-46 Score=377.26 Aligned_cols=304 Identities=12% Similarity=0.144 Sum_probs=225.6
Q ss_pred CceEEEEEEEEEEec-------CCCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHH
Q 043137 1 MAITITAVKARQIFD-------SRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNA 73 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~-------~~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~ 73 (445)
|.|||++|+++.+.. +.++++++|+|+||+|++|||+++..+ +. .......|++
T Consensus 9 ~~MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~----------------~~---~~~~~~~i~~ 69 (391)
T 2qgy_A 9 SIGKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIEGWGEAFSIN----------------FR---EKGIAIIIKE 69 (391)
T ss_dssp CCCCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCEEEEEECCCT----------------TT---HHHHHHHHHH
T ss_pred CCCEEEEEEEEEecCccccccccCCCcEEEEEEEECCCCEEEecccCCC----------------CC---hHHHHHHHHH
Confidence 679999999999952 124578999999999999999765421 11 1233445666
Q ss_pred hHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeee
Q 043137 74 IIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPV 153 (445)
Q Consensus 74 ~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~ 153 (445)
++|.|+|+||.+++.+|+.|. .+... |..+.+ .+|++|||+||||+.||.+|+|||+||| |..+..+|+
T Consensus 70 -l~p~l~G~d~~~~~~i~~~l~-~~~~~-----~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~~~vp~ 138 (391)
T 2qgy_A 70 -LFREISNIPNLSIKSFYNKIS-LLSDG-----HRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLT---KSPKPNVPI 138 (391)
T ss_dssp -HHHHHTTCTTCCHHHHHHHHH-HHHTT-----CCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHC---SSCCSEEEE
T ss_pred -HHHHhcCCChhHHHHHHHHHH-hhhhh-----ccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCcCCCcce
Confidence 999999999999999999998 42211 112234 6899999999999999999999999999 876666666
Q ss_pred eeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHH
Q 043137 154 PAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233 (445)
Q Consensus 154 ~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l 233 (445)
|+ +|+.+.. .+. +...+++.+...++|+.+| .|.| +.+ .+.+.+.++++
T Consensus 139 --~~--~g~~~~~--~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g-----------~~~-~~~~~e~v~av 187 (391)
T 2qgy_A 139 --YA--TCWSDLK--KDT---------NDYLRQIEKFYGKKYGGIK----IYPM-----------LDS-LSISIQFVEKV 187 (391)
T ss_dssp --EE--ECCCSSC--CCH---------HHHHHHHHHHHHTTCSCEE----ECCC-----------CSS-HHHHHHHHHHH
T ss_pred --EE--ecccCCC--CCH---------HHHHHHHHHHHHcCCCEEE----EccC-----------CCh-HHHHHHHHHHH
Confidence 43 2222100 011 1223444444334444433 2222 110 12334555555
Q ss_pred HHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHH
Q 043137 234 NTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYA 313 (445)
Q Consensus 234 ~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~ 313 (445)
|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||++++|+++++
T Consensus 188 R~a~---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~ 238 (391)
T 2qgy_A 188 REIV---G--DELPLMLDLA-----------------------VPEDLDQTKSFL-KEVSSFNPYWIEEPVDGENISLLT 238 (391)
T ss_dssp HHHH---C--SSSCEEEECC-----------------------CCSCHHHHHHHH-HHHGGGCCSEEECSSCTTCHHHHH
T ss_pred HHHh---C--CCCEEEEEcC-----------------------CCCCHHHHHHHH-HHHHhcCCCeEeCCCChhhHHHHH
Confidence 5554 6 5899999993 578899999984 568999999999999999999999
Q ss_pred HHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC-hhhH--
Q 043137 314 KLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET-EDTF-- 390 (445)
Q Consensus 314 ~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et-~~~~-- 390 (445)
+|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|++++++++ ++ .++.
T Consensus 239 ~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~--~~~~i~~aa 313 (391)
T 2qgy_A 239 EIKNTFN--MKVVTGEKQ-SGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW--NSMSVSASA 313 (391)
T ss_dssp HHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC--SCTTHHHHH
T ss_pred HHHhhCC--CCEEEcCCc-CCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC--CCcHHHHHH
Confidence 9999998 999999985 56999999999999999999999999999999999999999999877664 56 6654
Q ss_pred HHHHHhhhc
Q 043137 391 IADLSVGLA 399 (445)
Q Consensus 391 ~~~la~a~~ 399 (445)
.+||+.+++
T Consensus 314 ~~hlaaa~~ 322 (391)
T 2qgy_A 314 MLHVCSSIP 322 (391)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCC
Confidence 456655543
No 77
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=2.6e-46 Score=378.55 Aligned_cols=296 Identities=18% Similarity=0.212 Sum_probs=224.8
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++.... . +...+...
T Consensus 27 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~------------------~-~~~~~~~~ 87 (383)
T 3toy_A 27 AAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFAYT------------------R-LALKPLVH 87 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCEEEEEEECSS------------------G-GGHHHHHH
T ss_pred CEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCEEEEEeeCCC------------------C-chHHHHHH
Confidence 8999999987742 222 356899999999999999754311 0 12334556
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+.+.++|.|+|+||.+++ +|+.|.+.+.. .|++++..+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 88 i~~~l~p~l~G~d~~~~e-~~~~l~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~ 156 (383)
T 3toy_A 88 LVEDIGRELAGKALVPVD-LMKAMDAKFRL------LGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLG---GSA-RP 156 (383)
T ss_dssp HHHHHHHHTTTCBCCHHH-HHHHHHHHTTT------TCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-CC
T ss_pred HHHHHHHHhCCCCCCcHH-HHHHHHHHHhh------cCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 677899999999999999 99999843321 12234446899999999999999999999999999 864 56
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|+ |++ +|.. + ++..++++.+...+ +|+++| .|+|. .+.+.+.++
T Consensus 157 v~~--y~s--~g~~-----~---------~e~~~~~a~~~~~~~G~~~~K----lKvG~------------~~~~~d~~~ 202 (383)
T 3toy_A 157 IPA--YDS--YGVL-----D---------ARDDERTLRTACDEHGFRAIK----SKGGH------------GDLATDEAM 202 (383)
T ss_dssp EEE--EEE--CSSC-----C---------HHHHHHHHHHHHHTSCCCEEE----EECCS------------SCHHHHHHH
T ss_pred eEE--eEe--cCCC-----C---------HHHHHHHHHHHHHccCCcEEE----EecCC------------CCHHHHHHH
Confidence 766 443 2321 1 12234455554444 555543 44431 123344566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++|+
T Consensus 203 v~avR~a~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~ 253 (383)
T 3toy_A 203 IKGLRALL---G--PDIALMLDF-----------------------NQSLDPAEATRR-IARLADYDLTWIEEPVPQENL 253 (383)
T ss_dssp HHHHHHHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSCTTCH
T ss_pred HHHHHHHh---C--CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcchH
Confidence 66666555 6 589999999 367899999987 566899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ + ..
T Consensus 254 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~-~----~~ 325 (383)
T 3toy_A 254 SGHAAVRERSE--IPIQAGENW-WFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHI-L----PE 325 (383)
T ss_dssp HHHHHHHHHCS--SCEEECTTC-CHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCS-C----HH
T ss_pred HHHHHHHhhcC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-H----HH
Confidence 99999999998 999999985 6699999999999999999999999999999999999999999986544 3 23
Q ss_pred HHHHHHhhhc
Q 043137 390 FIADLSVGLA 399 (445)
Q Consensus 390 ~~~~la~a~~ 399 (445)
+.+|++.++.
T Consensus 326 a~lhl~aa~p 335 (383)
T 3toy_A 326 ASAHVLPVTP 335 (383)
T ss_dssp HHHHHGGGCT
T ss_pred HHHHHHHhCC
Confidence 5678877654
No 78
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=9.9e-47 Score=383.09 Aligned_cols=302 Identities=18% Similarity=0.153 Sum_probs=224.4
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++..+ + .+...
T Consensus 24 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~g--------------------~---~~~~~ 80 (398)
T 4dye_A 24 MKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG--------------------A---PVAAI 80 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS--------------------H---HHHHH
T ss_pred ceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCEEEEeecCc--------------------h---HHHHH
Confidence 7999999987742 333 34689999999999999976431 1 12334
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+ +.++|.|+|+||.+++.+|+.|.+... .+ +..+.+|++|||+||||+.||.+|+|||+||| |..+++
T Consensus 81 i-~~l~p~liG~d~~~~~~~~~~l~~~~~------~~--g~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~ 148 (398)
T 4dye_A 81 V-RRMAPDLIGTSPFALEAFHRKQHMVPF------FY--GYLGYAAIAAVDVACWDAMGKATGQSVTDLLG---GAVRDE 148 (398)
T ss_dssp H-HHHHHHHTTCCTTCHHHHHHHTTTHHH------HH--HHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSE
T ss_pred H-HHHHHHHcCCCccCHHHHHHHHHhhhh------hh--ccccHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCcCCe
Confidence 5 679999999999999999998862110 01 11235899999999999999999999999999 987788
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
+|+++ ++. ....++..... .+++.++++.+...+ +|+++| .|+| .+.+.+.++
T Consensus 149 v~~y~--s~~-~~~~~g~~~~~------~~e~~~~~a~~~~~~~G~~~~K----~KvG-------------~~~~~d~~~ 202 (398)
T 4dye_A 149 VPITA--LIT-RADAPGATPAD------LPKAMAEHAVRVVEEGGFDAVK----LKGT-------------TDCAGDVAI 202 (398)
T ss_dssp EEBEE--EEC-GGGSTTCCTTT------HHHHHHHHHHHHHHHHCCSEEE----EECC-------------SCHHHHHHH
T ss_pred EEEEE--EEe-ccccCCcccCC------CHHHHHHHHHHHHHhcCCCEEE----EecC-------------CCHHHHHHH
Confidence 88754 221 10000000000 012233444444444 555543 3433 112334555
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ +++.|++|+ |+.||.++++++ .+.++++++.|||||++ |+
T Consensus 203 v~avR~~~------~~~~l~vDa-----------------------N~~w~~~~A~~~-~~~l~~~~i~~iEqP~~--d~ 250 (398)
T 4dye_A 203 LRAVREAL------PGVNLRVDP-----------------------NAAWSVPDSVRA-GIALEELDLEYLEDPCV--GI 250 (398)
T ss_dssp HHHHHHHC------TTSEEEEEC-----------------------TTCSCHHHHHHH-HHHHGGGCCSEEECCSS--HH
T ss_pred HHHHHHhC------CCCeEEeeC-----------------------CCCCCHHHHHHH-HHHHhhcCCCEEcCCCC--CH
Confidence 55554443 589999999 367899999987 56689999999999999 89
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +.|++++
T Consensus 251 ~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~e~~i~ 326 (398)
T 4dye_A 251 EGMAQVKAKVR--IPLCTNMCV-VRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHS-GGELGIA 326 (398)
T ss_dssp HHHHHHHHHCC--SCEEESSSC-CSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SCCCHHH
T ss_pred HHHHHHHhhCC--CCEEeCCcC-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcC-CcchHHH
Confidence 99999999998 999999985 6799999999999999999999999999999999999999999987755 7888888
Q ss_pred HHHHHHhhhcCC
Q 043137 390 FIADLSVGLATG 401 (445)
Q Consensus 390 ~~~~la~a~~~~ 401 (445)
.+++++++...+
T Consensus 327 ~aa~l~laaa~p 338 (398)
T 4dye_A 327 TAAHLAVVSSTP 338 (398)
T ss_dssp HHHHHHHHHTCT
T ss_pred HHHHHHHHhcCC
Confidence 777777665433
No 79
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=2.7e-46 Score=379.60 Aligned_cols=299 Identities=18% Similarity=0.194 Sum_probs=223.9
Q ss_pred eEEEEEEEEEEecC--------CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS--------RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~--------~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+..+ .+ +..++|+|+||+|++|||++.... .+. +.+... ..
T Consensus 10 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-~~~--------------~~~~~~--~~ 72 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCNF-PAC--------------GAEHRA--RL 72 (392)
T ss_dssp BCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCCS-STT--------------HHHHHH--HH
T ss_pred CEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCEEEEEeccCC-CCC--------------chHHHH--HH
Confidence 89999999887532 22 356899999999999999763110 010 111222 14
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHH----hccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQ----LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~----l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+++.++|.|+|+||.+++++|+.|.+. ... .|..+...+|+||||+||||+.||.+|+|||+||| |.
T Consensus 73 i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~ 143 (392)
T 3ddm_A 73 VETVLAPLLTARAFADPAQAFAHLEARTAVLAIQ------TGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLG---GS 143 (392)
T ss_dssp HHHTHHHHHTTSCBSSHHHHHHHHHHTTHHHHHH------HTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS
T ss_pred HHHHHHHHhCCCCcCCHHHHHHHHHhhhhhhhhh------cCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 577899999999999999999999832 110 01122346899999999999999999999999999 87
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
. +++|++. + |. .. +...+++.+...++|+.+| .|+|. +.+.+
T Consensus 144 ~-~~v~~y~--~---g~------~~---------e~~~~~a~~~~~~G~~~iK----lK~g~-------------~~~~d 185 (392)
T 3ddm_A 144 G-DRIGVYA--S---GI------NP---------ENPEDVVARKAAEGYRAFK----LKVGF-------------DDARD 185 (392)
T ss_dssp C-CEEEEEE--E---EE------CS---------SSHHHHHHHHHHHTCCCEE----EECSS-------------CHHHH
T ss_pred C-CceeEEe--e---cC------CH---------HHHHHHHHHHHHcCCCEEE----EecCC-------------CHHHH
Confidence 6 6777743 2 21 11 1223444444444565543 44331 22344
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||+++
T Consensus 186 ~~~v~avR~a~---g--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~L~~~~i~~iEeP~~~ 236 (392)
T 3ddm_A 186 VRNALHVRELL---G--AATPLMADA-----------------------NQGWDLPRARQM-AQRLGPAQLDWLEEPLRA 236 (392)
T ss_dssp HHHHHHHHHHH---C--SSSCEEEEC-----------------------TTCCCHHHHHHH-HHHHGGGCCSEEECCSCT
T ss_pred HHHHHHHHHhc---C--CCceEEEeC-----------------------CCCCCHHHHHHH-HHHHHHhCCCEEECCCCc
Confidence 56666665555 5 589999999 367899999987 567899999999999999
Q ss_pred CC-HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 307 DD-WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 307 ~D-~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
+| ++++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|+++ ++|+ .+
T Consensus 237 ~d~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~-~~h~-~~ 311 (392)
T 3ddm_A 237 DRPAAEWAELAQAAP--MPLAGGENI-AGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRY-CPHY-LG 311 (392)
T ss_dssp TSCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEE-CCEE-CS
T ss_pred cchHHHHHHHHHhcC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEE-EecC-Cc
Confidence 99 999999999998 999999985 679999999999999999999999999999999999999999998 5674 57
Q ss_pred Chhh--HHHHHHhhhc
Q 043137 386 TEDT--FIADLSVGLA 399 (445)
Q Consensus 386 t~~~--~~~~la~a~~ 399 (445)
+.++ +.+||+++++
T Consensus 312 ~~i~~aa~~hl~aa~p 327 (392)
T 3ddm_A 312 AGIGLQASAHLLAAVP 327 (392)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHhCC
Confidence 7665 4556665554
No 80
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=7.7e-46 Score=374.52 Aligned_cols=293 Identities=14% Similarity=0.129 Sum_probs=225.4
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+|| |++|||+++.. ..+...
T Consensus 6 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~G~Ge~~~~-----------------------~~~~~~ 61 (372)
T 3cyj_A 6 PRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRKGLGYTYGD-----------------------VSVGRF 61 (372)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEEEESC-----------------------THHHHH
T ss_pred CEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcEEEEeccCc-----------------------HHHHHH
Confidence 8999999887732 222 34689999999 99999976531 123445
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+||.+++.+|+.|.+.++++. .+++..+|++|||+||||+.||.+|+|||+||| |. +++
T Consensus 62 i~~~l~~~l~g~d~~~~~~i~~~l~~~~~~~~------~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~ 131 (372)
T 3cyj_A 62 VESKLAGVAEGSDALSPPAVWARMQAAIRNAG------RPGVGAMAVSAVDIALWDLKARLLGLPLADALP---RF-HAE 131 (372)
T ss_dssp HHHHTHHHHTTSBTTCHHHHHHHHHHHTTTTC------SSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSC---CC-CSS
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHhhhHcCCcHHHHhC---CC-CCC
Confidence 77789999999999999999999984433321 244557899999999999999999999999999 86 456
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|+ |+++ |.+. .+. ++..+++.+...++|+++| .|+|. +.+.+.+++
T Consensus 132 vp~--~~~~--g~~~---~~~---------~~~~~~a~~~~~~G~~~~K----iKvG~-------------~~~~d~~~v 178 (372)
T 3cyj_A 132 VPV--YGSG--GFTS---YPL---------RRLQEQLGGWAAAGIPRVK----MKVGR-------------EPEKDPERV 178 (372)
T ss_dssp EEE--EEEC--CCTT---SCH---------HHHHHHHHHHHHTTCCEEE----EECCS-------------SGGGHHHHH
T ss_pred ceE--EEEc--CCCC---CCH---------HHHHHHHHHHHHcCCCEEE----EcCCC-------------CHHHHHHHH
Confidence 666 4432 3211 111 2234555555555665554 34331 234567777
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC-CeeeEECCCCcCCH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY-PIVSIEDPFDQDDW 309 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~-~i~~iEdP~~~~D~ 309 (445)
+++|+++ | +++.|++|+| +.||.+++++++. .+++| ++.|||||++++|+
T Consensus 179 ~avr~a~---g--~~~~l~vDaN-----------------------~~~~~~~a~~~~~-~l~~~~~i~~iEqP~~~~d~ 229 (372)
T 3cyj_A 179 RAAREAI---G--ESVELMVDAN-----------------------GAYTRKQALYWAG-AFAREAGISYLEEPVSSEDR 229 (372)
T ss_dssp HHHHHHH---C--TTSEEEEECT-----------------------TCSCHHHHHHHHH-HHHHHHCCCEEECSSCTTCH
T ss_pred HHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHHH-HHHhhcCCcEEECCCCcccH
Confidence 7777766 5 5899999993 6788999999855 58999 99999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
++|++|+++++.++||++||+. .+..+++++ .+++|++|||++++||||++++++++|+++|++++++++ .+
T Consensus 230 ~~~~~l~~~~~~~ipIa~dE~~-~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-----~~ 301 (372)
T 3cyj_A 230 EGLRLLRDRGPGGVAIAAGEYE-WTLPQLHDL--AGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSAHCA-----PA 301 (372)
T ss_dssp HHHHHHHHHSCTTCEEEECTTC-CSHHHHHHH--HTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEECSC-----HH
T ss_pred HHHHHHHHhCCCCCCEECCCCc-cCHHHHHHH--hCCCCEEecCchhhCCHHHHHHHHHHHHHcCCeecccch-----HH
Confidence 9999999998734699999986 568999998 899999999999999999999999999999999987764 34
Q ss_pred HHHHHHhhhc
Q 043137 390 FIADLSVGLA 399 (445)
Q Consensus 390 ~~~~la~a~~ 399 (445)
+.+|++.++.
T Consensus 302 a~lhlaaa~~ 311 (372)
T 3cyj_A 302 VSAHACCAVE 311 (372)
T ss_dssp HHHHHGGGCT
T ss_pred HHHHHHHhCC
Confidence 5677776654
No 81
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=4.7e-46 Score=377.56 Aligned_cols=299 Identities=18% Similarity=0.195 Sum_probs=225.0
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +..++|+|+||+|++|||++.... . +...++..
T Consensus 28 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~------------------~-~~~~~~~~ 88 (390)
T 3ugv_A 28 LTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEPYV------------------P-KAMKYLVP 88 (390)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCCEEEEECCSC------------------G-GGHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCCEEEEEeecCC------------------C-chHHHHHH
Confidence 8999999987742 333 356899999999999999754311 1 12344555
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+.+.++|.|+|+||.++ ++|+.|.+.+.. .|++++..+|++|||+||||+.||.+|+|||+||| |.. ++
T Consensus 89 ~~~~l~p~liG~d~~~~-~~~~~l~~~~~~------~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~ 157 (390)
T 3ugv_A 89 ALHDMSDMLAGQPLAPA-EIYDKTRKSLHF------VGYAGLSMIAASGVDMAVWDALARAANMPLCTLLG---GTP-GS 157 (390)
T ss_dssp HHHHHHHHHTTSBCCHH-HHHHHHHHHTGG------GCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCC-CE
T ss_pred HHHHHHHHHCCCCcchH-HHHHHHHHHHHh------hCCcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC-Cc
Confidence 67789999999999999 999999843321 12234446899999999999999999999999999 864 56
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH---HHHHHHHHHHhhcCCCCcccCCCCCCCCCccChH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE---VYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENK 227 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~---~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 227 (445)
+|+ |.++ |++.. ..++..++++.+...+ +|+++| .|+|. ++.+.+.
T Consensus 158 v~~--y~s~-g~~~~------------~~~e~~~~~a~~~~~~~~~G~~~iK----lKvG~------------~~~~~d~ 206 (390)
T 3ugv_A 158 VKA--YNSN-GLWLK------------SPAEVAAEAVELKAEGQGTGFKGLK----LRMGR------------DDPAVDI 206 (390)
T ss_dssp EEE--EECS-CCCSS------------CHHHHHHHHHHHHHTTCTTCCSEEE----EECCC------------SSHHHHH
T ss_pred eEE--EEec-ccccC------------CCHHHHHHHHHHHHHhhhCCCcEEE----EecCC------------CCHHHHH
Confidence 766 5443 22210 0112234444444444 555443 44431 1233445
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcC
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~ 307 (445)
++++++|+++ | +++.|++|+ |++||.++++++ .+.++++++.|||||++++
T Consensus 207 ~~v~avR~a~---G--~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~i~~iEqP~~~~ 257 (390)
T 3ugv_A 207 ETAEAVWDAV---G--RDTALMVDF-----------------------NQGLDMAEAMHR-TRQIDDLGLEWIEEPVVYD 257 (390)
T ss_dssp HHHHHHHHHH---C--TTSEEEEEC-----------------------TTCCCHHHHHHH-HHHHTTSCCSEEECCSCTT
T ss_pred HHHHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHH-HHHHHhhCCCEEECCCCcc
Confidence 6666666555 5 589999999 367899999987 5668999999999999999
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||++++++++|+++|+++++++ +
T Consensus 258 d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~-~---- 329 (390)
T 3ugv_A 258 NFDGYAQLRHDLK--TPLMIGENF-YGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHL-Y---- 329 (390)
T ss_dssp CHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBS-C----
T ss_pred cHHHHHHHHHhcC--CCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecC-H----
Confidence 9999999999998 999999985 6799999999999999999999999999999999999999999986544 3
Q ss_pred hhHHHHHHhhhc
Q 043137 388 DTFIADLSVGLA 399 (445)
Q Consensus 388 ~~~~~~la~a~~ 399 (445)
..+.+|++.++.
T Consensus 330 ~~a~lhl~aa~p 341 (390)
T 3ugv_A 330 PEVGAHVMRVTE 341 (390)
T ss_dssp HHHHHHHHTTCT
T ss_pred HHHHHHHHHhCC
Confidence 235678777654
No 82
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=2.8e-45 Score=370.35 Aligned_cols=299 Identities=19% Similarity=0.224 Sum_probs=224.1
Q ss_pred eEEEEEEEEEEe--------cCCCC-----ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 3 ITITAVKARQIF--------DSRGN-----PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 3 mkI~~v~~~~v~--------~~~g~-----~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
|||++|+++.+. ++.+. ++++|+|+||+|++|||+++.. | .+..++.+
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~G~Ge~~~~---g----------------~~~~~~~~ 62 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N----------------HGGAAVAT 62 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S----------------SSHHHHHH
T ss_pred CceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCEEEEeecCC---C----------------CchHHHHH
Confidence 699999998773 23332 3589999999999999976431 1 11345566
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.+++.++|.|+|+||.+++.+|+.|.+.+.+. +++++..+|++|||+||||+.||.+|+|||+||| |. +.
T Consensus 63 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~~~------~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~ 132 (371)
T 2ovl_A 63 MVDKDLRGCLLGADAEQIEKIWQSMWWRLHYA------GRGGHATSAISAVDIALWDLKGIRARTPLWKLFG---GY-DP 132 (371)
T ss_dssp HHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTT------CSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CS
T ss_pred HHHHHHHHHhcCCCcccHHHHHHHHHHHhhhc------CCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CC
Confidence 67788999999999999999999998433321 2344567899999999999999999999999999 86 45
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|+ |++ +|.+. .+.+ ...+++.+...++|+.+| .|.|. .+.+.+.+.
T Consensus 133 ~v~~--y~~--~~~~~---~~~e---------~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~ 180 (371)
T 2ovl_A 133 VVPV--YAG--GIDLE---LPVA---------DLKTQADRFLAGGFRAIK----MKVGR------------PDLKEDVDR 180 (371)
T ss_dssp EEEE--EEE--CCBTT---SCHH---------HHHHHHHHHHHTTCSCEE----EECCC------------SSHHHHHHH
T ss_pred CeeE--EEe--CCCcC---CCHH---------HHHHHHHHHHHcCCCEEE----ECCCC------------CCHHHHHHH
Confidence 5665 543 23210 1111 223444444434454433 33331 122334556
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||++++|+
T Consensus 181 v~avr~a~---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~ 231 (371)
T 2ovl_A 181 VSALREHL---G--DSFPLMVDAN-----------------------MKWTVDGAIRAA-RALAPFDLHWIEEPTIPDDL 231 (371)
T ss_dssp HHHHHHHH---C--TTSCEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSCTTCH
T ss_pred HHHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccH
Confidence 66565555 5 5899999993 578899999984 56899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++|+++++ +||++||+. .++++++++++.+++|+++||++++||+|++++++++|+++|+++++++ +. .
T Consensus 232 ~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~-~~----~ 303 (371)
T 2ovl_A 232 VGNARIVRESG--HTIAGGENL-HTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG-VH----D 303 (371)
T ss_dssp HHHHHHHHHHC--SCEEECTTC-CSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS-CH----H
T ss_pred HHHHHHHhhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc-HH----H
Confidence 99999999998 999999985 6699999999999999999999999999999999999999999987755 32 2
Q ss_pred HHHHHHhhhc
Q 043137 390 FIADLSVGLA 399 (445)
Q Consensus 390 ~~~~la~a~~ 399 (445)
+.+||+.++.
T Consensus 304 a~~hlaaa~~ 313 (371)
T 2ovl_A 304 LTVHALASVP 313 (371)
T ss_dssp HHHHHHTSCT
T ss_pred HHHHHHhhCC
Confidence 5677776654
No 83
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=4.1e-46 Score=379.55 Aligned_cols=301 Identities=19% Similarity=0.250 Sum_probs=226.1
Q ss_pred ceEEEEEEEEEEec--------CC----------CCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCcc
Q 043137 2 AITITAVKARQIFD--------SR----------GNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKG 63 (445)
Q Consensus 2 ~mkI~~v~~~~v~~--------~~----------g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~ 63 (445)
.|||++|+++.+.. +. .+++++|+|+||+|++|||++++.. +.+
T Consensus 25 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~----------------~~~-- 86 (398)
T 2pp0_A 25 GDRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKR----------------AGG-- 86 (398)
T ss_dssp SCCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESS----------------TTH--
T ss_pred CCeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEecCcc----------------chH--
Confidence 48999999987742 11 1357999999999999999875421 111
Q ss_pred HHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 64 VSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 64 ~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
.. +..+.+.++|.|+|+||.+++.+|+.|. ..... +|.+++..+|++|||+||||+.||.+|+|||+|||
T Consensus 87 -~~-~~~~~~~l~p~l~G~d~~~~~~i~~~l~-~~~~~-----~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG-- 156 (398)
T 2pp0_A 87 -QG-IYAHAKEIADNLLGEDPNDIDKIYTKLL-WAGAS-----VGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLG-- 156 (398)
T ss_dssp -HH-HHHHHHHHGGGGTTSCTTCHHHHHHHHH-HHTGG-----GCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHC--
T ss_pred -HH-HHHHHHHHHHHHcCCCchhHHHHHHHHH-Hhhcc-----cCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 22 2233346999999999999999999998 43211 22345567899999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 223 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 223 (445)
|. +.++|+ |+++ |+.+. .+.+ +..+++.+...++|+.+| .|.|. ++.
T Consensus 157 -g~-~~~vp~--y~~~-g~~~~---~~~e---------~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~ 203 (398)
T 2pp0_A 157 -AH-RDSVQC--YNTS-GGFLH---TPLD---------QVLKNVVISRENGIGGIK----LKVGQ------------PNC 203 (398)
T ss_dssp -CS-CSEEEE--EECT-TSCTT---SCHH---------HHHHHHHHHHHTTCSCEE----EECCC------------SCH
T ss_pred -CC-CCCeeE--EEec-CCcCC---CCHH---------HHHHHHHHHHHhCCCeEE----EecCC------------CCH
Confidence 86 555554 6553 23210 1122 223445444444554443 23331 123
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.+.++.+|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||
T Consensus 204 ~~d~e~v~avR~av---G--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~~iEqP 254 (398)
T 2pp0_A 204 AEDIRRLTAVREAL---G--DEFPLMVDAN-----------------------QQWDRETAIRMG-RKMEQFNLIWIEEP 254 (398)
T ss_dssp HHHHHHHHHHHHHH---C--SSSCEEEECT-----------------------TCSCHHHHHHHH-HHHGGGTCSCEECC
T ss_pred HHHHHHHHHHHHHc---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHHcCCceeeCC
Confidence 33456666666655 5 5899999993 578899999985 56899999999999
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
++++|++++++|+++++ +||++||+. .++++++++++.+++|+++||++++||||++++++++|+++|++++ +|++
T Consensus 255 ~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~-~h~~ 330 (398)
T 2pp0_A 255 LDAYDIEGHAQLAAALD--TPIATGEML-TSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLA-PHFA 330 (398)
T ss_dssp SCTTCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSC
T ss_pred CChhhHHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEe-ecCc
Confidence 99999999999999998 999999985 5799999999999999999999999999999999999999999975 5655
Q ss_pred CCChhhHHHHHHhhhcC
Q 043137 384 GETEDTFIADLSVGLAT 400 (445)
Q Consensus 384 ~et~~~~~~~la~a~~~ 400 (445)
++ ..+||++++..
T Consensus 331 ~~----~~~~laaa~~~ 343 (398)
T 2pp0_A 331 ME----VHLHLSAAYPL 343 (398)
T ss_dssp HH----HHHHHHHTCSS
T ss_pred cH----HHHHHHhcCCC
Confidence 44 36899887653
No 84
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=6.6e-46 Score=371.46 Aligned_cols=294 Identities=18% Similarity=0.174 Sum_probs=228.5
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+||+|++|||+++.. +.|++++..++...
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 66 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPS---------------FRVNGERVEALLAI 66 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHCCCHHHHHHT
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCCEEEEEecCC---------------CCcCCCCHHHHHHH
Confidence 6999999987732 222 35699999999999999976531 12446667787777
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++ ++|.|+|+||.+++.+|+.|. .+ ....+|++|||+||||+.||.+|+|||+||| | .+++
T Consensus 67 i~~-l~~~l~g~d~~~~~~~~~~l~-~~------------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~ 128 (345)
T 2zad_A 67 ENA-VREMITGIDVRNYARIFEITD-RL------------FGFPSLKAAVQFATLDALSQELGTQVCYLLG---G-KRDE 128 (345)
T ss_dssp HHH-HHHHHTTCBGGGHHHHHHHHT-TC------------TTSHHHHHHHHHHHHHHHHHHHTSCHHHHTT---C-CCSE
T ss_pred HHH-HHHHhCCCChhhHHHHHHHHH-Hh------------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCc
Confidence 887 999999999999999998883 32 1236899999999999999999999999999 8 5678
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|+|. +++++ +. +...+++.+...++|+.+| .|.|. + ..+.+
T Consensus 129 v~~~~--~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g~-------------~---~~~d~ 170 (345)
T 2zad_A 129 IETDK--TVGID-------TV---------ENRVKEAKKIFEEGFRVIK----IKVGE-------------N---LKEDI 170 (345)
T ss_dssp EEBCE--EECSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS-------------C---HHHHH
T ss_pred eeeeE--EecCC-------CH---------HHHHHHHHHHHHcCcCEEE----EeecC-------------C---HHHHH
Confidence 88754 33322 11 1223444444444554443 33321 1 23445
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCee--eEECCCCcCC
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIV--SIEDPFDQDD 308 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~--~iEdP~~~~D 308 (445)
+.+ +++|++| +++.|++|+| ++||.+++++++ +.++++++. |||||++++|
T Consensus 171 ~~v-~avr~~g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~~~iE~P~~~~~ 223 (345)
T 2zad_A 171 EAV-EEIAKVT--RGAKYIVDAN-----------------------MGYTQKEAVEFA-RAVYQKGIDIAVYEQPVRRED 223 (345)
T ss_dssp HHH-HHHHHHS--TTCEEEEECT-----------------------TCSCHHHHHHHH-HHHHHTTCCCSEEECCSCTTC
T ss_pred HHH-HHHHhhC--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCeeeeeCCCCccc
Confidence 555 4566556 6899999993 578889999985 568999999 9999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++|+|++| ||+|++++++++|+++|++++++|+ .||.+
T Consensus 224 ~~~~~~l~~~~~--ipia~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~-~es~i 298 (345)
T 2zad_A 224 IEGLKFVRFHSP--FPVAADESA-RTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCM-GESSL 298 (345)
T ss_dssp HHHHHHHHHHSS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCS-SCCHH
T ss_pred HHHHHHHHHhCC--CCEEEeCCc-CCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecC-cccHH
Confidence 999999999998 999999985 679999999999999999999999 9999999999999999999988774 78877
Q ss_pred hH--HHHHHhhhc
Q 043137 389 TF--IADLSVGLA 399 (445)
Q Consensus 389 ~~--~~~la~a~~ 399 (445)
+. .+||+.+++
T Consensus 299 ~~aa~~hlaa~~~ 311 (345)
T 2zad_A 299 GINQSVHFALGTG 311 (345)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCC
Confidence 64 556666554
No 85
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=5.4e-46 Score=380.25 Aligned_cols=274 Identities=18% Similarity=0.180 Sum_probs=208.5
Q ss_pred eEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhcc
Q 043137 21 TVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDG 100 (445)
Q Consensus 21 ~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~ 100 (445)
+++|+|+||+|++|||++.. ...++..+.+.++|.|+|+||.+++++|+.|++...
T Consensus 66 ~vlV~V~tddGi~G~Ge~~~-----------------------~~~~~~~i~~~lap~LiG~dp~~ie~i~~~m~~~~~- 121 (455)
T 3fxg_A 66 SFLVEIEATDGTVGFATGFG-----------------------GPPACWLVHQHFERFLIGADPRNTNLLFEQMYRASM- 121 (455)
T ss_dssp EEEEEEEETTSCEEEEEEEC-----------------------HHHHHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHTT-
T ss_pred EEEEEEEECCCCEEEEeCcC-----------------------CHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHhhh-
Confidence 48999999999999986532 122345677889999999999999999999984321
Q ss_pred CCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCC
Q 043137 101 TVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVG 180 (445)
Q Consensus 101 ~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~ 180 (445)
++|+.+...+|+|||||||||+.||.+|+|||+||| |+.|+++|+|. + |+ .
T Consensus 122 -----~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~rd~vp~y~--~--g~-------~---------- 172 (455)
T 3fxg_A 122 -----FYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIG---GATKERLDFYC--T--GP-------E---------- 172 (455)
T ss_dssp -----TTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEEEE--E--SS-------C----------
T ss_pred -----hccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CccCCeeEEee--c--CC-------C----------
Confidence 122344445799999999999999999999999999 98788888743 2 11 0
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccC
Q 043137 181 ASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGS 260 (445)
Q Consensus 181 ~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~ 260 (445)
.+.+.+ ++|+++| .|+|... . .|. .+++.+.++++++|+++ | +++.|++|+
T Consensus 173 ---~~~~~~---~Gf~~~K----lKv~~~~-~---~G~--~~~~~di~rv~avRea~---G--~d~~L~vDa-------- 223 (455)
T 3fxg_A 173 ---PTAAKA---MGFWGGK----VPLPFCP-D---DGH--EGLRKNVEFLRKHREAV---G--PDFPIMVDC-------- 223 (455)
T ss_dssp ---HHHHHH---HTCSCEE----EECCCCG-G---GHH--HHHHHHHHHHHHHHHHH---C--SSSCEEEEC--------
T ss_pred ---HHHHHH---cCCCEEE----EcCCCCc-c---ccc--ccHHHHHHHHHHHHHHh---C--CCCeEEEeC--------
Confidence 012222 3465543 3432100 0 010 01223455555555554 6 589999999
Q ss_pred CceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHH
Q 043137 261 DKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEK 340 (445)
Q Consensus 261 ~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~ 340 (445)
|+.||.++++++ .+.+++|++.|||||++++|++++++|+++++ .+||++||+. .+++++++
T Consensus 224 ---------------N~~wt~~~Ai~~-~~~Le~~~l~~iEEPl~~dd~~~la~L~~~~~-~iPIA~gEs~-~s~~d~~~ 285 (455)
T 3fxg_A 224 ---------------YMSLNVSYTIEL-VKACLDLNINWWEECLSPDDTDGFALIKRAHP-TVKFTTGEHE-YSRYGFRK 285 (455)
T ss_dssp ---------------TTCCCHHHHHHH-HHHTGGGCCSEEECCSCGGGGGGHHHHHHHCT-TSEEEECTTC-CHHHHHHH
T ss_pred ---------------CCCCCHHHHHHH-HHhcccCCcceecCCCCcchHHHHHHHHHhCC-CCeEECCCcc-CCHHHHHH
Confidence 367899999987 56689999999999999999999999999973 2899999985 55999999
Q ss_pred HHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhc
Q 043137 341 AIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 341 ~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
+++.+++|++|+|++++||||++++++++|+++|++++ +|.++ .+.+||++++.
T Consensus 286 li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~-~H~~~----~aslHlaaa~p 339 (455)
T 3fxg_A 286 LVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVV-PHASG----PYSYHFQISQP 339 (455)
T ss_dssp HHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBC-CCSCT----HHHHHHHTTCT
T ss_pred HHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEE-ecchH----HHHHHHHHhCC
Confidence 99999999999999999999999999999999999975 45332 35678887764
No 86
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=2.6e-45 Score=371.44 Aligned_cols=298 Identities=16% Similarity=0.227 Sum_probs=224.9
Q ss_pred CceEEEEEEEEEEe--------cCCCC------ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIF--------DSRGN------PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~--------~~~g~------~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|+|||++|+++.+. .+.+. ++++|+|+||+|++|||++... ++.|++++..+
T Consensus 1 m~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~--------------~~~~~~~~~~~ 66 (378)
T 2qdd_A 1 MSLRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVTGWGEGCPW--------------GHSYLPAHGPG 66 (378)
T ss_dssp -CCCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCEEEEEECCS--------------TTTSSSCCHHH
T ss_pred CCCEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCCEEEEEEecC--------------CCCcCCCCHHH
Confidence 78999999998773 23332 4689999999999999965421 02366777888
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+...++ .++|.|+|+||.+++.+|+.|. ... . + ..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 67 ~~~~l~-~l~~~l~g~d~~~~~~~~~~l~-~~~---~------g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~ 130 (378)
T 2qdd_A 67 LRAGIA-TLAPHLLGLDPRSLDHVNRVMD-LQL---P------G--HSYVKSPIDMACWDILGQVAGLPLWQLLG---GE 130 (378)
T ss_dssp HHHHHH-HHHHHHTTCCTTCHHHHHHHHH-HHS---C------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CS
T ss_pred HHHHHH-HHHHHHCCCCccCHHHHHHHHH-Hhh---c------c--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC
Confidence 888888 8999999999999999999996 321 1 2 36899999999999999999999999999 87
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
.++++|++ .+++.+ +. +...+++.+...++|+.+| .|.|. ++.+.+
T Consensus 131 ~~~~v~~~--~~~~~~-------~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~ 176 (378)
T 2qdd_A 131 AATPVPIN--SSISTG-------TP---------DQMLGLIAEAAAQGYRTHS----AKIGG------------SDPAQD 176 (378)
T ss_dssp SCCCEEBE--EEECSC-------CH---------HHHHHHHHHHHHHTCCEEE----EECCS------------SCHHHH
T ss_pred CCCCCceE--EEecCC-------CH---------HHHHHHHHHHHHHhhhhee----ecCCC------------CChHHH
Confidence 66777764 433211 11 1223444444444554443 33331 122223
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.+.++.+|++ +| +++.|++|+| ++||.+++++++ +.++ +++ |||||++
T Consensus 177 ~e~v~avr~a---~g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~-~~i-~iEqP~~- 224 (378)
T 2qdd_A 177 IARIEAISAG---LP--DGHRVTFDVN-----------------------RAWTPAIAVEVL-NSVR-ARD-WIEQPCQ- 224 (378)
T ss_dssp HHHHHHHHHS---CC--TTCEEEEECT-----------------------TCCCHHHHHHHH-TSCC-CCC-EEECCSS-
T ss_pred HHHHHHHHHH---hC--CCCEEEEeCC-----------------------CCCCHHHHHHHH-HHhC-CCc-EEEcCCC-
Confidence 4444444333 45 5899999993 578889999884 5678 999 9999998
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGET 386 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et 386 (445)
|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +.|+
T Consensus 225 -d~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~~es 299 (378)
T 2qdd_A 225 -TLDQCAHVARRVA--NPIMLDECL-HEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED-VGGT 299 (378)
T ss_dssp -SHHHHHHHHTTCC--SCEEECTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCC
T ss_pred -CHHHHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC-CCCc
Confidence 9999999999988 999999985 5699999999999999999999999999999999999999999987765 5788
Q ss_pred hhhHH--HHHHhhhc
Q 043137 387 EDTFI--ADLSVGLA 399 (445)
Q Consensus 387 ~~~~~--~~la~a~~ 399 (445)
.++.. +||+.+++
T Consensus 300 ~i~~aa~~hlaaa~~ 314 (378)
T 2qdd_A 300 ALADTAALHLAASTP 314 (378)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 77654 55555443
No 87
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=3.8e-45 Score=369.41 Aligned_cols=296 Identities=19% Similarity=0.266 Sum_probs=222.9
Q ss_pred Cc-eEEEEEEEEEEecC---------CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHH
Q 043137 1 MA-ITITAVKARQIFDS---------RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVS 65 (445)
Q Consensus 1 ~~-mkI~~v~~~~v~~~---------~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~ 65 (445)
|+ |||++|+++.+..+ .+ +++++|+|+||+|++|||++... ++.|.+++..
T Consensus 1 m~~MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~--------------~~~~~~~~~~ 66 (371)
T 2ps2_A 1 MSDLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPF--------------GSNYIASHPR 66 (371)
T ss_dssp --CCCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCEEEEEECCS--------------TTTSSSCCHH
T ss_pred CCCCEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCCEEEEEEecC--------------CcccCCCCHH
Confidence 55 89999999888522 11 24589999999999999965421 0126677777
Q ss_pred HHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccC
Q 043137 66 KAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG 145 (445)
Q Consensus 66 ~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G 145 (445)
++...+++ ++|.|+|+||.+++.+|+.|.+.+. + ..+|++|||+||||+.||.+|+|||+||| |
T Consensus 67 ~~~~~i~~-l~~~l~g~d~~~~~~~~~~l~~~~~----------~--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g 130 (371)
T 2ps2_A 67 GVRAGIAT-MAPSLIGLDPRRVDRINDAMDDALL----------G--HEDAKTAIDVACWDIFGKSVGLPVCELLG---G 130 (371)
T ss_dssp HHHHHHHH-HHHHHTTSCTTCHHHHHHHHHHHCS----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---C
T ss_pred HHHHHHHH-HHHHHCCCCcccHHHHHHHHHHHhc----------c--cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---C
Confidence 77778876 9999999999999999999983221 1 25799999999999999999999999999 8
Q ss_pred CCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccC
Q 043137 146 NKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQE 225 (445)
Q Consensus 146 ~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~ 225 (445)
..++++|+ |.+++++ +. +...+++.+...++|+.+| .|.| . +.
T Consensus 131 ~~~~~vp~--~~~~~~~-------~~---------~~~~~~a~~~~~~Gf~~iK----ik~g-------~------~~-- 173 (371)
T 2ps2_A 131 RTNTRLPL--ISSIYVG-------EP---------EDMRARVAKYRAKGYKGQS----VKIS-------G------EP-- 173 (371)
T ss_dssp CCSSCEEB--EEEECSC-------CH---------HHHHHHHHHHHTTTCCEEE----EECC-------S------CH--
T ss_pred CCCCceEE--EEEeCCC-------CH---------HHHHHHHHHHHHhChheEE----eecC-------C------CH--
Confidence 76666666 5444322 11 1223344443333444333 2322 1 12
Q ss_pred hHHHHHHHHHHHHH-hCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhh-ccCCeeeEECC
Q 043137 226 NKEGLELLNTAIAK-AGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFI-SDYPIVSIEDP 303 (445)
Q Consensus 226 ~~~~l~~l~~av~~-~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l-~~~~i~~iEdP 303 (445)
...++.+ +++|+ +| +++.|++|+| ++||.+++++++ +.+ +++++ |||||
T Consensus 174 -~~~~e~v-~avr~a~g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~~i-~iE~P 224 (371)
T 2ps2_A 174 -VTDAKRI-TAALANQQ--PDEFFIVDAN-----------------------GKLSVETALRLL-RLLPHGLDF-ALEAP 224 (371)
T ss_dssp -HHHHHHH-HHHTTTCC--TTCEEEEECT-----------------------TBCCHHHHHHHH-HHSCTTCCC-EEECC
T ss_pred -HHHHHHH-HHHHHhcC--CCCEEEEECC-----------------------CCcCHHHHHHHH-HHHHhhcCC-cCcCC
Confidence 3334444 34443 45 5899999993 578889999985 457 89999 99999
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
++ |++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||+|++++++++|+++|++++++|+
T Consensus 225 ~~--~~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~- 298 (371)
T 2ps2_A 225 CA--TWRECISLRRKTD--IPIIYDELA-TNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQET- 298 (371)
T ss_dssp BS--SHHHHHHHHTTCC--SCEEESTTC-CSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECS-
T ss_pred cC--CHHHHHHHHhhCC--CCEEeCCCc-CCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCC-
Confidence 98 9999999999988 999999985 77999999999999999999999999999999999999999999998885
Q ss_pred CCChhhHHHHHHhhh
Q 043137 384 GETEDTFIADLSVGL 398 (445)
Q Consensus 384 ~et~~~~~~~la~a~ 398 (445)
.||.++..+.++++.
T Consensus 299 ~es~i~~aa~~hlaa 313 (371)
T 2ps2_A 299 CGSDIAFAAIVHLAQ 313 (371)
T ss_dssp SCCHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHH
Confidence 488776555444443
No 88
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=2.4e-45 Score=372.07 Aligned_cols=297 Identities=16% Similarity=0.216 Sum_probs=226.6
Q ss_pred ceEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.|||++|+++.+.. +.+ +++++|+|+||+|++|||+++ +. ...+..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-g~---------------------~~~~~~ 60 (382)
T 2gdq_A 3 LVKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECV-DW---------------------LPALHV 60 (382)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEEC-SC---------------------HHHHHH
T ss_pred CCEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCEEEEeec-Cc---------------------hHHHHH
Confidence 39999999987742 222 357899999999999999775 21 123455
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.|++.++|.|+|+||.+++.+|+.|. .. ..+|++|||+||||+.||.+|+|||+||| |..++
T Consensus 61 ~i~~~l~~~l~G~d~~~~~~~~~~l~-~~--------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~ 122 (382)
T 2gdq_A 61 GFTKRIIPFLLGKQAGSRLSLVRTIQ-KW--------------HQRAASAVSMALTEIAAKAADCSVCELWG---GRYRE 122 (382)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHH-HH--------------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCSCS
T ss_pred HHHHHHHHHhcCCCcccHHHHHHHHH-HH--------------HhHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCC
Confidence 67777999999999999999999997 31 14799999999999999999999999999 87667
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|++. .+ |+.+. ..+++ +..++++.+...++|+.+| .|.| . .+.+.+.+.
T Consensus 123 ~vp~~~--~~-g~~~~-~~~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g-------~-----~~~~~d~e~ 173 (382)
T 2gdq_A 123 EIPVYA--SF-QSYSD-SPQWI---------SRSVSNVEAQLKKGFEQIK----VKIG-------G-----TSFKEDVRH 173 (382)
T ss_dssp EEEEEE--EC-CCBCS-STTHH---------HHHHHHHHHHHTTTCCEEE----EECS-------S-----SCHHHHHHH
T ss_pred ceeEEE--Ee-cccCC-CcccH---------HHHHHHHHHHHHcCCCEEE----EcCC-------C-----CCHHHHHHH
Confidence 777643 32 21110 00000 1223444444334444433 2322 1 123334566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC-CeeeEECCCCcCC
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY-PIVSIEDPFDQDD 308 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~-~i~~iEdP~~~~D 308 (445)
++++|+++ | +++.|++|+| ++||.+++++++ +.++++ ++.|||||++++|
T Consensus 174 v~avR~a~---G--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~~i~~iEqP~~~~d 224 (382)
T 2gdq_A 174 INALQHTA---G--SSITMILDAN-----------------------QSYDAAAAFKWE-RYFSEWTNIGWLEEPLPFDQ 224 (382)
T ss_dssp HHHHHHHH---C--TTSEEEEECT-----------------------TCCCHHHHHTTH-HHHTTCSCEEEEECCSCSSC
T ss_pred HHHHHHhh---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHhhccCCeEEECCCCccc
Confidence 66666655 5 5899999993 578889999884 568999 9999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|+++++ | +.|+.+
T Consensus 225 ~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~-~-~~es~i 299 (382)
T 2gdq_A 225 PQDYAMLRSRLS--VPVAGGENM-KGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASA-H-AYDGSL 299 (382)
T ss_dssp HHHHHHHHTTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECC-C-CSSCSH
T ss_pred HHHHHHHHhhCC--CCEEecCCc-CCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEee-c-CCCcHH
Confidence 999999999988 999999985 66999999999999999999999999999999999999999999865 5 678988
Q ss_pred hHHHHHHhhhcCC
Q 043137 389 TFIADLSVGLATG 401 (445)
Q Consensus 389 ~~~~~la~a~~~~ 401 (445)
+.+++++++...+
T Consensus 300 ~~~a~l~laa~~~ 312 (382)
T 2gdq_A 300 SRLYALFAQACLP 312 (382)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhCc
Confidence 8777666665444
No 89
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=2.3e-45 Score=371.58 Aligned_cols=295 Identities=17% Similarity=0.152 Sum_probs=226.4
Q ss_pred CceEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
|.|||++|+++.+.. +.+ +++++|+|+|| |++|||+++..+ .+.|+++++.++.
T Consensus 6 ~~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~~G~GE~~~~~-------------~~~~~~e~~~~~~ 71 (375)
T 1r0m_A 6 RMFKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHGE-GVQGVAEGTMEA-------------RPMYREETIAGAL 71 (375)
T ss_dssp CCEECCEEEEEEEEEEBC----------CEEEEEEEEEEET-TEEEEEECCCBS-------------SSSSSSCBHHHHH
T ss_pred cccEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEEC-CeEEEEEEecCC-------------CCcccCCCHHHHH
Confidence 569999999987742 122 35789999995 999999765421 1237788888888
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCc
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN 148 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~ 148 (445)
..+++.++|.|+|+|+.+++.+++.|. .+. + +.+|++|||+||||+.||..|+|||+||| |. +
T Consensus 72 ~~i~~~l~~~l~g~d~~~~~~l~~~~~-~~~----------g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~ 134 (375)
T 1r0m_A 72 DLLRGTFLPAILGQTFANPEAVSDALG-SYR----------G--NRMARAMVEMAAWDLWARTLGVPLGTLLG---GH-K 134 (375)
T ss_dssp HHHHHTHHHHHTTCEESSHHHHHHTTT-TSC----------S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---CC-C
T ss_pred HHHHHHHHHHHcCCCcCCHHHHHHHHH-Hcc----------C--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-C
Confidence 889888999999999999999886664 321 1 25799999999999999999999999999 86 3
Q ss_pred ceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHH
Q 043137 149 LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 228 (445)
Q Consensus 149 ~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~ 228 (445)
..+|++ |++ |.+. +. ++..+++.+...++|+.+| .|.| + +.+.+
T Consensus 135 ~~~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~ 178 (375)
T 1r0m_A 135 EQVEVG-VSL---GIQA----DE---------QATVDLVRRHVEQGYRRIK----LKIK-------------P--GWDVQ 178 (375)
T ss_dssp SEEEBC-EEE---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHH
T ss_pred Cceeee-EEe---cCCC----CH---------HHHHHHHHHHHHhcccEEE----EecC-------------h--HHHHH
Confidence 457765 332 2110 11 1223444444444454443 2211 2 23466
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC
Q 043137 229 GLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD 308 (445)
Q Consensus 229 ~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D 308 (445)
.++++|+++ +++.|++|+| +.||.++ +++ .+.++++++.|||||++++|
T Consensus 179 ~v~avr~a~------~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iEqP~~~~d 227 (375)
T 1r0m_A 179 PVRATREAF------PDIRLTVDAN-----------------------SAYTLAD-AGR-LRQLDEYDLTYIEQPLAWDD 227 (375)
T ss_dssp HHHHHHHHC------TTSCEEEECT-----------------------TCCCGGG-HHH-HHTTGGGCCSCEECCSCTTC
T ss_pred HHHHHHHHc------CCCeEEEeCC-----------------------CCCCHHH-HHH-HHHHHhCCCcEEECCCCccc
Confidence 676666553 5789999993 5678888 887 45689999999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|+.+
T Consensus 228 ~~~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i 303 (375)
T 1r0m_A 228 LVDHAELARRIR--TPLCLDESV-ASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGM-LESGI 303 (375)
T ss_dssp SHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHH
T ss_pred HHHHHHHHHhCC--CCEEecCcc-CCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCc-cccHH
Confidence 999999999998 999999985 77999999999999999999999999999999999999999999999995 58877
Q ss_pred hHHHHHHhh
Q 043137 389 TFIADLSVG 397 (445)
Q Consensus 389 ~~~~~la~a 397 (445)
+..+.++++
T Consensus 304 ~~aa~~hla 312 (375)
T 1r0m_A 304 GRAHNIHLS 312 (375)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 765544444
No 90
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=3.1e-45 Score=375.98 Aligned_cols=304 Identities=17% Similarity=0.203 Sum_probs=230.4
Q ss_pred CceEEEEEEEEEEe--------cCCCC------ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIF--------DSRGN------PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~--------~~~g~------~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|.|||++|+++.+. ++.+. ++++|+|+||+|++|+|+++. | ++..+
T Consensus 37 ~~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~G~GE~~~----g----------------~~~~~ 96 (428)
T 3bjs_A 37 HDMKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHP----G----------------RSPGA 96 (428)
T ss_dssp --CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECC----T----------------TCHHH
T ss_pred CCCEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCEEEEEecC----C----------------CCHHH
Confidence 46999999999883 33443 579999999999999997653 1 12456
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+...|++.++|.|+|+||.+++.+|+.|.+... |+.++.++..+|++||||||||+.||.+|+|||+||| |.
T Consensus 97 ~~~~i~~~l~p~liG~d~~~~~~i~~~l~~~~~-----~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~ 168 (428)
T 3bjs_A 97 ITSLIHNTIAPMLIGMKATDCVGAWQRVHRMQL-----SSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLG---GS 168 (428)
T ss_dssp HHHHHHHTTTTTTTTSBTTCHHHHHHHHHHHTT-----TTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC
T ss_pred HHHHHHHHHHHHhCCCCccCHHHHHHHHHHhhh-----hccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 667788789999999999999999999973211 0111233456899999999999999999999999999 86
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCC-hhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccC
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVG-ASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQE 225 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~-~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~ 225 (445)
+.++|+ |++ |..+. ..+ +..++++.+...++|+.+| .|.|. +.+.
T Consensus 169 -~~~vp~--~~s--g~~~~------------~~~~e~~~~~a~~~~~~Gf~~vK----ik~g~-------------~~~~ 214 (428)
T 3bjs_A 169 -KRRIPA--YAG--GIALG------------YQPKESLAEEAQEYIARGYKALK----LRIGD-------------AARV 214 (428)
T ss_dssp -CCCEEE--EEE--SSCSC------------SCCHHHHHHHHHHHHHHTCSEEE----EECCS-------------CHHH
T ss_pred -CCceee--eee--ccccC------------CChHHHHHHHHHHHHHCCCCEEE----ECCCC-------------CHHH
Confidence 555665 543 22111 111 2234555555555565543 34331 2233
Q ss_pred hHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCC
Q 043137 226 NKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFD 305 (445)
Q Consensus 226 ~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~ 305 (445)
+.+.++++|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||++
T Consensus 215 d~e~v~avR~av---G--~d~~l~vDan-----------------------~~~~~~eai~~~-~~L~~~~i~~iEqP~~ 265 (428)
T 3bjs_A 215 DIERVRHVRKVL---G--DEVDILTDAN-----------------------TAYTMADARRVL-PVLAEIQAGWLEEPFA 265 (428)
T ss_dssp HHHHHHHHHHHH---C--TTSEEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCSCEECCSC
T ss_pred HHHHHHHHHHhc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCC
Confidence 455565555554 5 5899999993 578889999985 5689999999999999
Q ss_pred cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 306 QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
++|++++++|+++++ ++||++||+. .++++++++++.+++|++++|++++||||++++++++|+++|++++++ +.|
T Consensus 266 ~~d~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~--~~e 341 (428)
T 3bjs_A 266 CNDFASYREVAKITP-LVPIAAGENH-YTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPINAH--SSA 341 (428)
T ss_dssp TTCHHHHHHHTTTCS-SSCEEECTTC-CSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB--CCS
T ss_pred ccCHHHHHHHHHhCC-CCcEEcCCCc-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec--CCC
Confidence 999999999998864 4999999985 569999999999999999999999999999999999999999998654 678
Q ss_pred ChhhHH--HHHHhhhc
Q 043137 386 TEDTFI--ADLSVGLA 399 (445)
Q Consensus 386 t~~~~~--~~la~a~~ 399 (445)
|.++.+ +||++++.
T Consensus 342 s~i~~~a~~hlaaa~~ 357 (428)
T 3bjs_A 342 TGLNHAATIHFLAATE 357 (428)
T ss_dssp SHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHhCC
Confidence 887755 67777655
No 91
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=2.7e-45 Score=378.99 Aligned_cols=313 Identities=15% Similarity=0.146 Sum_probs=222.9
Q ss_pred CceEEEEEEEEEEecCC--C-------C---ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIFDSR--G-------N---PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~--g-------~---~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
|+||||+|+++.|.-+. . . ..++|+|+||+|++|+|+++. + ..+.
T Consensus 6 ~~~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi~G~GE~~~--------------------~---~~v~ 62 (470)
T 3p0w_A 6 HTPRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG--------------------G---EGIR 62 (470)
T ss_dssp CCCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC--------------------C---HHHH
T ss_pred CCCeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCCEEEEeCCC--------------------h---HHHH
Confidence 46899999999985331 1 1 257999999999999998642 1 2233
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccc--------------c-----------chhhHHHHHHH
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQK--------------L-----------GANAILAVSLA 123 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~--------------~-----------~~~a~sAvdiA 123 (445)
..|++ ++|.|+|+||.+++.+|+.|++.+... ++++ . ..+|+||||+|
T Consensus 63 ~~i~~-l~p~LiG~d~~~ie~i~~~~~~~~~~~------~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~A 135 (470)
T 3p0w_A 63 QALER-VIPLVVGQSIGRTNGVLSSIRRALAGG------GNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAA 135 (470)
T ss_dssp HHHHH-TGGGTTTCBGGGHHHHHHHHHHHHC-------------------------------------CHHHHHHHHHHH
T ss_pred HHHHH-HHHHhCCCChhhHHHHHHHHHHHHhhc------CCCCcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 44654 899999999999999999999544211 1111 0 13799999999
Q ss_pred HHHHHHHhcCCchhhhhccccC-CCcceeeeeeEEeecCcccCCCCccccee-------e-----eccCChhcHHHHHHH
Q 043137 124 VCKAGAHVKKIPLYKHIAELSG-NKNLVLPVPAFNVINGGSHAGNKLAMQEF-------M-----ILPVGASCFKEAMKM 190 (445)
Q Consensus 124 lwD~~gk~~g~Pl~~lLG~~~G-~~~~~vp~~~~~~~~gg~~~~~~~~~~e~-------~-----~~p~~~~~~~~a~~~ 190 (445)
|||+.||.+|+|||+||| | +.++++|+|.+....|.. ....+..... . -.-.+++.++++.+.
T Consensus 136 LWDl~gK~~g~Pv~~LLG---gG~~r~~v~~y~~~~~~gd~-~~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~ 211 (470)
T 3p0w_A 136 LLDLLGQFLEVPVAELLG---AGQQRDSAPMLAYLFYVGDR-RKTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAA 211 (470)
T ss_dssp HHHHHHHHHTSBGGGTST---TSCCCSEEEBCEEECCBCCG-GGSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHhC---CCCCCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 999999999999999999 5 567889987653221110 0000000000 0 000122334444444
Q ss_pred HH-HHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeeccc
Q 043137 191 GV-EVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFK 269 (445)
Q Consensus 191 ~~-~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~ 269 (445)
.. ++|+++| .|+|. .+.+.+.++++ ++|+++ +++.|++|+
T Consensus 212 ~~~~Gf~~~K----lKvG~------------~~~~~Di~rv~----avRea~--pd~~L~vDa----------------- 252 (470)
T 3p0w_A 212 TERYGFADFK----LKGGV------------MPGAEEMEAIA----AIKARF--PHARVTLDP----------------- 252 (470)
T ss_dssp HHHHCCSEEE----EECSS------------SCHHHHHHHHH----HHHHHC--TTSEEEEEC-----------------
T ss_pred HHhCCCCEEE----EeCCC------------CCHHHHHHHHH----HHHHhC--CCCeEEeeC-----------------
Confidence 43 3555543 44331 11122344444 455544 689999999
Q ss_pred CCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCC----HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcC
Q 043137 270 EENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDD----WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEK 345 (445)
Q Consensus 270 ~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~ 345 (445)
|+.||.++++++ .+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++..+++++++.+
T Consensus 253 ------N~~w~~~~Ai~~-~~~Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~l~~~ 321 (470)
T 3p0w_A 253 ------NGAWSLNEAIAL-CKGQGHL-VAYAEDPCGPEAGYSGREVMAEFKRATG--IPTATNMI-ATDWRQMGHAVQLH 321 (470)
T ss_dssp ------TTBBCHHHHHHH-HTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-SCSHHHHHHHHHTT
T ss_pred ------CCCCCHHHHHHH-HHhcccc-ceeecCCCChhhccchHHHHHHHHhcCC--CCEEeCCc-cCCHHHHHHHHHcC
Confidence 467899999987 5678899 999999999999 799999999999 99999997 57799999999999
Q ss_pred CCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh--HHHHHHhhhc
Q 043137 346 TCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 346 a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
++|++|+|+ ++||||++++++++|+++|+++ .+|++.++.++ +++||++++.
T Consensus 322 a~div~~d~-~~GGit~a~kia~lA~a~gv~~-~~h~~~e~~I~~aA~~hlaaa~p 375 (470)
T 3p0w_A 322 AVDIPLADP-HFWTMQGSVRVAQLCDEWGLTW-GSHSNNHFDVSLAMFTHVAAAAP 375 (470)
T ss_dssp CCSEEBCCH-HHHCHHHHHHHHHHHHHHTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred CCCEEEecC-ccCCHHHHHHHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 999999999 8999999999999999999996 56766777665 4567766654
No 92
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=1.5e-45 Score=378.51 Aligned_cols=312 Identities=13% Similarity=0.125 Sum_probs=221.6
Q ss_pred eEEEEEEEEEEecC-------CC--C---ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFDS-------RG--N---PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~~-------~g--~---~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
||||+|+++.+..+ .| . ..++|+|+||+ ++|+|+++. + ......
T Consensus 27 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~-~~G~GE~~g--------------------~---~~~~~~ 82 (445)
T 3va8_A 27 SIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITED-SYGLGESYG--------------------D---SAHLDR 82 (445)
T ss_dssp TBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSS-CEEEEEEEC--------------------C---HHHHHH
T ss_pred CEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECC-CEEEEecCC--------------------c---HHHHHH
Confidence 89999999988533 11 1 23799999999 999997642 1 122334
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcc-cccccc------cchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEW-GWCKQK------LGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~-~~~~~~------~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
| +.++|.|+|+||.+++++|+.|++.+.+.. .+ ..|..+ +...|++|||+||||+.||.+|+|||+|||
T Consensus 83 i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~-~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG-- 158 (445)
T 3va8_A 83 L-QKAADKIKGLSVYSTNVIYQRCVESLRNDT-NTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG-- 158 (445)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHTTTCC-C--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT--
T ss_pred H-HHHHHHHCCCChhHHHHHHHHHHHhhhccc-ccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 5 469999999999999999999995432210 00 012222 445799999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHH-HHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVE-VYHHLKAVIKKKYGQDATNVGDEGGFAPN 222 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~-~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 222 (445)
|..++++|++.+.......+ ++. .......+..+++.++++.+...+ +|+++| .|.|. .+
T Consensus 159 -G~~r~~v~~~a~~~y~~~~~-~g~-~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~------------~~ 219 (445)
T 3va8_A 159 -GRVRDSVQYSAYLFYKWGGH-PGD-EDDEYGPALDPEGVVKQAKKIIDEYGFKAIK----LKGGV------------FP 219 (445)
T ss_dssp -CCSSSEEEBCEEEECBCSSS-TTS-CCCTTCCBCSHHHHHHHHHHHHHHHCCSCEE----EECSS------------SC
T ss_pred -CCCCCeEEEeeeeccccccc-ccc-cccccccCCCHHHHHHHHHHHHHhcCCCEEE----EccCC------------CC
Confidence 98888999865542110000 000 000000001122334445444432 555543 34331 11
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
.+.+.++++++|+++ +++.|++|+ |+.||.++++++ .+.++++ +.||||
T Consensus 220 ~~~Di~~v~avRea~------~~~~L~vDa-----------------------N~~w~~~~Ai~~-~~~L~~~-l~~iEe 268 (445)
T 3va8_A 220 PADEVAAIKALHKAF------PGVPLRLDP-----------------------NAAWTVETSKWV-AKELEGI-VEYLED 268 (445)
T ss_dssp HHHHHHHHHHHHHHS------TTCCEEEEC-----------------------TTCBCHHHHHHH-HHHTTTT-CSEEES
T ss_pred HHHHHHHHHHHHHhC------CCCcEeeeC-----------------------CCCCCHHHHHHH-HHHHhhh-cCeEee
Confidence 233445555554443 589999999 468899999987 5568999 999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++ |++++++|+++++ +||++||+. +++++++++++.+++|++|+|++++||||++++++++|+++|+++++ |.
T Consensus 269 P~~--d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~~~gv~v~~-h~ 342 (445)
T 3va8_A 269 PAG--EIEGMAAVAKEAS--MPLATNMAV-VAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLSM-HS 342 (445)
T ss_dssp CBS--HHHHHHHHHTTCS--SCEEESSSC-CSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEE-CC
T ss_pred cCc--CHHHHHHHHHcCC--CCEEeCCcc-CCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHHHcCCEEEE-eC
Confidence 985 8999999999998 999999984 67999999999999999999999999999999999999999999755 55
Q ss_pred CCCChhhHH--HHHHhhh
Q 043137 383 SGETEDTFI--ADLSVGL 398 (445)
Q Consensus 383 ~~et~~~~~--~~la~a~ 398 (445)
+.++.++.+ +||++++
T Consensus 343 ~~e~~I~~aa~~hlaaa~ 360 (445)
T 3va8_A 343 NSHLGISLAAMTHLASAT 360 (445)
T ss_dssp CSCCHHHHHHHHHHHHTC
T ss_pred CcccHHHHHHHHHHHHhC
Confidence 677777644 5666544
No 93
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=5.1e-45 Score=370.52 Aligned_cols=301 Identities=14% Similarity=0.120 Sum_probs=226.3
Q ss_pred CceEEEEEEEEEEecCCCC--------------------c-----------eEEEEEEeCCCceEEEeccCCCccccccc
Q 043137 1 MAITITAVKARQIFDSRGN--------------------P-----------TVEVDVTTSDGHVARAAVPSGASTGIYEA 49 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g~--------------------~-----------~v~V~v~td~G~~G~g~~~~~~~~g~~e~ 49 (445)
|.|||++|+++.+..+... | +++|+|+||+|++|||++++..
T Consensus 1 m~mkI~~i~~~~~~~pl~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~------- 73 (388)
T 2nql_A 1 MNSPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPTFDRSVLVRMTTEAGTVGWGETYGIV------- 73 (388)
T ss_dssp CCCCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEESSEEEEEEEEEETTCCEEEEEEECSS-------
T ss_pred CCceEeEEEEEEEeccCcccccccccccccccccccccCCccccccCccceEEEEEEEECCCCEEEEEecCCC-------
Confidence 8899999999988543211 2 6899999999999999765421
Q ss_pred eeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHH
Q 043137 50 LELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGA 129 (445)
Q Consensus 50 ~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~g 129 (445)
++ ......|++.++|.|+|+||.+++.+|+.|. .+ ++.+ .+..++..+|++|||+||||+.|
T Consensus 74 -----------~~--~~~~~~i~~~l~~~l~G~d~~~~~~i~~~l~-~~-~~~~---~~~~~~~~~a~~aid~AlwDl~a 135 (388)
T 2nql_A 74 -----------AP--GAVAALINDLLAGFVIGRDASDPSAVYDDLY-DM-MRVR---GYTGGFYVDALAALDIALWDIAG 135 (388)
T ss_dssp -----------CH--HHHHHHHHHTHHHHHTTCCSSSHHHHHHHHH-HH-HGGG---TCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -----------Cc--HHHHHHHHHHHHHHhcCCCcccHHHHHHHHH-hh-cccc---cCCchHHHHHHHHHHHHHHHHHH
Confidence 11 2445567778999999999999999999996 21 1111 11234457899999999999999
Q ss_pred HhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 043137 130 HVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQD 209 (445)
Q Consensus 130 k~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~ 209 (445)
|.+|+|||+||| |. ++++|++ +++ |... +.+ +..+++.+...++|+.+| .|.|
T Consensus 136 k~~g~Pl~~llG---g~-~~~vp~~--~~~--g~~~----~~e---------~~~~~a~~~~~~Gf~~vK----ik~g-- 188 (388)
T 2nql_A 136 QEAGKSIRDLLG---GG-VDSFPAY--VSG--LPER----TLK---------ARGELAKYWQDRGFNAFK----FATP-- 188 (388)
T ss_dssp HHHTSBHHHHTT---CC-CSEEEEE--EEC--CCCS----SHH---------HHHHHHHHHHHTTCCEEE----EEGG--
T ss_pred HHcCCcHHHHhC---CC-CCceEee--EEe--CCCC----CHH---------HHHHHHHHHHHhCCCEEE----EeCC--
Confidence 999999999999 87 6677774 333 2110 111 223444444334454443 2322
Q ss_pred CcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHH
Q 043137 210 ATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYK 289 (445)
Q Consensus 210 ~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~ 289 (445)
+ .+.+. .+.++.+|+++ | +++.|++|+| ++||.+++++++
T Consensus 189 --------~--~~~~~-~e~v~avr~a~---g--~d~~l~vDan-----------------------~~~~~~~a~~~~- 228 (388)
T 2nql_A 189 --------V--ADDGP-AAEIANLRQVL---G--PQAKIAADMH-----------------------WNQTPERALELI- 228 (388)
T ss_dssp --------G--CTTCH-HHHHHHHHHHH---C--TTSEEEEECC-----------------------SCSCHHHHHHHH-
T ss_pred --------C--CChHH-HHHHHHHHHHh---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-
Confidence 1 12333 55666665555 5 5899999993 578889999985
Q ss_pred HhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 290 SFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 290 ~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
+.++++++.|||||++++|++++++|+++++ +||++||+. .++++++++++.+++|+|++|+++ ||+|++++++++
T Consensus 229 ~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~ 304 (388)
T 2nql_A 229 AEMQPFDPWFAEAPVWTEDIAGLEKVSKNTD--VPIAVGEEW-RTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGAL 304 (388)
T ss_dssp HHHGGGCCSCEECCSCTTCHHHHHHHHTSCC--SCEEECTTC-CSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHH
T ss_pred HHHhhcCCCEEECCCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHH
Confidence 5689999999999999999999999999988 999999985 579999999999999999999999 999999999999
Q ss_pred HHHcCCcEEecCCCCCChhhHHHHHHhhh
Q 043137 370 SKQAGWGVMASHRSGETEDTFIADLSVGL 398 (445)
Q Consensus 370 A~~~g~~~~~~~~~~et~~~~~~~la~a~ 398 (445)
|+++|+++++ |++.||.++..+.++++.
T Consensus 305 A~~~g~~~~~-h~~~es~i~~aa~~hlaa 332 (388)
T 2nql_A 305 AAEHGIDVIP-HATVGAGIFLAASLQASS 332 (388)
T ss_dssp HHHHTCEECC-CCCSSCSHHHHHHHHHHT
T ss_pred HHHcCCeEEe-ecCCCcHHHHHHHHHHHH
Confidence 9999999866 546788876555444443
No 94
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=5.7e-45 Score=367.84 Aligned_cols=294 Identities=17% Similarity=0.184 Sum_probs=229.6
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+||+| +|||+++..+ .+.|+++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTMA-------------GPLYSSEYNDGAEHV 66 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCBS-------------SSSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-EEEEEecCCC-------------CCccccCcHHHHHHH
Confidence 8999999887642 222 3578999999999 9999765421 123778888888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+|+.+++.+|+.|. .+. + +.+|++|||+||||+.||.+|+|||+||| |. +..
T Consensus 67 i~~~l~~~l~g~d~~~~~~l~~~~~-~~~----------g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~ 129 (368)
T 1sjd_A 67 LRHYLIPALLAAEDITAAKVTPLLA-KFK----------G--HRMAKGALEMAVLDAELRAHERSFAAELG---SV-RDS 129 (368)
T ss_dssp HHHTHHHHHHHSSSCCHHHHHHHHT-TSC----------S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CC-CSE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-Hhc----------C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCC
Confidence 9888999999999999999988775 332 1 25799999999999999999999999999 86 456
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++ |++ |.+. +. +...+++.+...++|+.+| .|.| + +.+.+.+
T Consensus 130 ~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~Gf~~vK----ik~~-------------~--~~~~e~v 173 (368)
T 1sjd_A 130 VPCG-VSV---GIMD----TI---------PQLLDVVGGYLDEGYVRIK----LKIE-------------P--GWDVEPV 173 (368)
T ss_dssp EEBE-EEE---CCCS----CH---------HHHHHHHHHHHHHTCSEEE----EECB-------------T--TBSHHHH
T ss_pred ccce-EEe---eCCC----CH---------HHHHHHHHHHHHhCccEEE----EecC-------------c--hhHHHHH
Confidence 7765 332 2110 11 1223445444444554443 2211 2 2347788
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+.+|+++ | +++.|++|+| ++||.++ +++ .+.++++++.|||||++++|++
T Consensus 174 ~avr~~~---g--~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iE~P~~~~~~~ 223 (368)
T 1sjd_A 174 RAVRERF---G--DDVLLQVDAN-----------------------TAYTLGD-APQ-LARLDPFGLLLIEQPLEEEDVL 223 (368)
T ss_dssp HHHHHHH---C--TTSEEEEECT-----------------------TCCCGGG-HHH-HHTTGGGCCSEEECCSCTTCHH
T ss_pred HHHHHhc---C--CCceEEEecc-----------------------CCCCHHH-HHH-HHHHHhcCCCeEeCCCChhhHH
Confidence 8777776 5 5899999993 5678889 887 5568999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. +++++++++++.+++|++++|++++||||++++++++|+++|+++|++|+ .|+.++.
T Consensus 224 ~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~ 299 (368)
T 1sjd_A 224 GHAELARRIQ--TPICLDESI-VSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGM-IETGLGR 299 (368)
T ss_dssp HHHHHHTTCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHHH
T ss_pred HHHHHHHhCC--CCEEECCCc-CCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCc-cccHHHH
Confidence 9999999988 999999985 77999999999999999999999999999999999999999999999995 5887765
Q ss_pred HHHHHhh
Q 043137 391 IADLSVG 397 (445)
Q Consensus 391 ~~~la~a 397 (445)
.+.++++
T Consensus 300 aa~~hla 306 (368)
T 1sjd_A 300 AANVALA 306 (368)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 95
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=5.6e-45 Score=369.19 Aligned_cols=297 Identities=15% Similarity=0.159 Sum_probs=224.4
Q ss_pred CceEEEEEEEEEEecC---------CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 1 MAITITAVKARQIFDS---------RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~---------~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|+|||++|+++.+..+ .+ +++++|+|+||+|++|||+++.. | +.|++++..+
T Consensus 1 m~mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~---~-----------~~~~~~~~~~ 66 (379)
T 2rdx_A 1 MSLRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTPC---G-----------ENYMIAHSEG 66 (379)
T ss_dssp -CCCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBCS---S-----------TTSSSCCTTH
T ss_pred CCCEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCCEEEEEeecC---C-----------CCcCCCCHHH
Confidence 7899999999887432 12 24589999999999999976431 0 1255666666
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+...++ .++|.|+|+||.+++.+|+.|. ... .+ ..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 67 ~~~~i~-~l~~~l~g~d~~~~~~~~~~l~-~~~---------~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~ 130 (379)
T 2rdx_A 67 VDAFAR-LAAPQLLGQDPRQVARMERLMD-HLV---------QG--HGYAKAPFDAAFWDILGQATGQPVWMLLG---GK 130 (379)
T ss_dssp HHHHHH-HHHHHHTTSCTTCHHHHHHHHH-HHS---------SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SC
T ss_pred HHHHHH-HHHHHHcCCChhhHHHHHHHHH-HHh---------cc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcC---CC
Confidence 677787 7999999999999999999996 321 12 46899999999999999999999999999 97
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
.++++|++ .++ |.. +. +...+++.+...++|+.+| .|.| . +.
T Consensus 131 ~~~~v~~~--~~~--~~~-----~~---------~~~~~~a~~~~~~Gf~~iK----ik~g-------~------~~--- 172 (379)
T 2rdx_A 131 LCDGAPMY--RVA--PQR-----SE---------AETRAELARHRAAGYRQFQ----IKVG-------A------DW--- 172 (379)
T ss_dssp CCSSEEBC--EEC--CCS-----CS---------HHHHHHHHHHHHTTCCEEE----EECC-------S------CH---
T ss_pred CCCceeEE--EEe--cCC-----CH---------HHHHHHHHHHHHcCCCEEE----Eecc-------C------CH---
Confidence 67777774 332 210 11 2223444444333444433 2322 1 12
Q ss_pred HHHHHHHHHHHHH-hCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCC
Q 043137 227 KEGLELLNTAIAK-AGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFD 305 (445)
Q Consensus 227 ~~~l~~l~~av~~-~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~ 305 (445)
...++.+ +++|+ +| +++.|++|+| ++||.+++++++ +.++++++ |||||++
T Consensus 173 ~~~~e~v-~avr~a~g--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i-~iE~P~~ 224 (379)
T 2rdx_A 173 QSDIDRI-RACLPLLE--PGEKAMADAN-----------------------QGWRVDNAIRLA-RATRDLDY-ILEQPCR 224 (379)
T ss_dssp HHHHHHH-HHHGGGSC--TTCEEEEECT-----------------------TCSCHHHHHHHH-HHTTTSCC-EEECCSS
T ss_pred HHHHHHH-HHHHHhcC--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhCCe-EEeCCcC
Confidence 2333444 34443 45 5899999993 578899999874 56899999 9999998
Q ss_pred cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 306 QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
|++++++|+++++ +||++||+. +++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +.|
T Consensus 225 --~~~~~~~l~~~~~--iPI~~de~i-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~e 298 (379)
T 2rdx_A 225 --SYEECQQVRRVAD--QPMKLDECV-TGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWG 298 (379)
T ss_dssp --SHHHHHHHHTTCC--SCEEECTTC-CSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBC
T ss_pred --CHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee-ccC
Confidence 9999999999988 999999985 7799999999999999999999999999999999999999999998775 578
Q ss_pred ChhhHHHHHHhhhc
Q 043137 386 TEDTFIADLSVGLA 399 (445)
Q Consensus 386 t~~~~~~~la~a~~ 399 (445)
+.++.+++++++..
T Consensus 299 s~i~~~a~~~laaa 312 (379)
T 2rdx_A 299 GEIASAAVAHFAAS 312 (379)
T ss_dssp SHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHc
Confidence 88876665555543
No 96
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=6.2e-45 Score=374.96 Aligned_cols=315 Identities=12% Similarity=0.119 Sum_probs=222.9
Q ss_pred ceEEEEEEEEEEecC--C-----C--C---ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS--R-----G--N---PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~--~-----g--~---~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
+||||+|+++.|.-+ . | . ..++|+|+||+|++|||+++.+ ..+.+
T Consensus 4 ~~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi~G~GE~~~~-----------------------~~v~~ 60 (450)
T 3mzn_A 4 FPKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGNRGVGEIPSS-----------------------EGILN 60 (450)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC-----------------------HHHHH
T ss_pred CCEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCCEEEEeCCCc-----------------------HHHHH
Confidence 489999999998522 1 1 1 2368999999999999986421 22234
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCccccccc------ccchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQ------KLGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~------~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
.|+ .++|.|+|+||.+++++|+.|++.+.+... ++ ++ .+..+|+||||+||||+.||.+|+|||+|||
T Consensus 61 ~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~--g~-~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG-- 134 (450)
T 3mzn_A 61 GLE-KCRSLVEGARVNEVKQVLSRARGLLAQGGP--EE-RGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLG-- 134 (450)
T ss_dssp HHH-HTHHHHTTCBGGGHHHHHHHHHHHHGGGCC--CC-CCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGST--
T ss_pred HHH-HHHHHhCCCChhhHHHHHHHHHHHhhcccC--CC-cccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 454 489999999999999999999854421100 00 11 1346899999999999999999999999999
Q ss_pred cC--CCcceeeeeeEEeecCcccCCCCccccee-------e-----eccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCC
Q 043137 144 SG--NKNLVLPVPAFNVINGGSHAGNKLAMQEF-------M-----ILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQ 208 (445)
Q Consensus 144 ~G--~~~~~vp~~~~~~~~gg~~~~~~~~~~e~-------~-----~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~ 208 (445)
| +.|+++|+|.+....|... ...+..... . -.-.+++.++++.+... ++|+++| .|+|.
T Consensus 135 -~~G~~r~~v~~y~~~~~~gd~~-~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~ 208 (450)
T 3mzn_A 135 -QYGRQRDEVEALGYLFLLGDPD-KTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDFK----LKGGV 208 (450)
T ss_dssp -TTCCCCSEEEBCEEEECBCCGG-GSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEE----EECSS
T ss_pred -CCCCcCceEEeeeeeccccccc-cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----ECCCC
Confidence 6 4578899876543222100 000000000 0 00012223344444333 2555443 34331
Q ss_pred CCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHH
Q 043137 209 DATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLY 288 (445)
Q Consensus 209 ~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~ 288 (445)
.+. .+.++.+ +++|+++ +++.|++|+ |+.||.++++++
T Consensus 209 ------------~~~---~~Di~~v-~avRea~--pd~~L~vDa-----------------------N~~w~~~~A~~~- 246 (450)
T 3mzn_A 209 ------------LRG---EEEADCI-RALHEAF--PEARLALDP-----------------------NGAWKLDEAVRV- 246 (450)
T ss_dssp ------------SCH---HHHHHHH-HHHHHHC--TTSEEEEEC-----------------------TTCBCHHHHHHH-
T ss_pred ------------CCH---HHHHHHH-HHHHHhC--CCCeEEEEC-----------------------CCCCCHHHHHHH-
Confidence 111 2334444 3455544 689999999 467899999987
Q ss_pred HHhhccCCeeeEECCCCcCC----HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHH
Q 043137 289 KSFISDYPIVSIEDPFDQDD----WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 364 (445)
Q Consensus 289 ~~~l~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~ 364 (445)
.+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++..+++++++.+++|++|+|+ ++||||+++
T Consensus 247 ~~~L~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~ 321 (450)
T 3mzn_A 247 LEPIKHL-LSYAEDPCGQEGGFSGRETMAEFKKRTG--LPTATNMI-ATDYKQLQYAVQLNSVDIPLADC-HFWTMQGAV 321 (450)
T ss_dssp HGGGGGG-CSEEESSBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-SSSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHH
T ss_pred HHHhhhc-cceeeCCCCcccccchHHHHHHHHHhcC--CCEEeCCc-cCCHHHHHHHHHcCCCCEEEecC-ccCCHHHHH
Confidence 5678999 999999999999 799999999999 99999997 57799999999999999999999 799999999
Q ss_pred HHHHHHHHcCCcEEecCCCCCChhh--HHHHHHhhhc
Q 043137 365 EAVRMSKQAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 365 ~ia~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
+++++|+++|+++ .+|.+.++.++ +++||+.+++
T Consensus 322 kia~lA~a~gv~~-~~h~~~~~~I~~aA~~hlaaa~p 357 (450)
T 3mzn_A 322 AVGELCNEWGMTW-GSHSNNHFDISLAMMTHVAAACP 357 (450)
T ss_dssp HHHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999999999996 56766777665 4556666653
No 97
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=7.9e-45 Score=368.54 Aligned_cols=307 Identities=17% Similarity=0.217 Sum_probs=228.8
Q ss_pred eEEEEEEEEEEec-----------C-CC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 3 ITITAVKARQIFD-----------S-RG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 3 mkI~~v~~~~v~~-----------~-~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|||++|+++.+.. + .+ +++++|+|+||+|++|||+++. + +.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~-------~--------------~~-- 57 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTAP-------E--------------IV-- 57 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEECG-------G--------------GG--
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCEEEEEecC-------c--------------hH--
Confidence 8999999987732 1 11 2468999999999999997651 1 01
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+...|++.++|.|+|+||.+++.+|+.|.+... + .| +++..+|++|||+||||+.||.+|+|||+||| |.
T Consensus 58 ~~~~i~~~l~~~l~g~d~~~~~~~~~~l~~~~~---~---~g-~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~ 127 (382)
T 1rvk_A 58 RPHVIEKFVKKVLIGEDHRDRERLWQDLAHWQR---G---SA-AQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG---GY 127 (382)
T ss_dssp CHHHHHHTHHHHHTTSBTTCHHHHHHHHHHHHT---T---TT-TCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC---CS
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhh---c---cc-chHHHHHHHHHHHHHHHHhHhHhCCCHHHHhC---CC
Confidence 344577789999999999999999999963221 1 11 34457899999999999999999999999999 87
Q ss_pred CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccCh
Q 043137 147 KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQEN 226 (445)
Q Consensus 147 ~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~ 226 (445)
+.++|++.++.+ |+.|... . ..++...+++.+...++|+.+| .|.|... +++.++.+.+
T Consensus 128 -~~~vp~~~~~~~-g~~~~~~-~--------~~~e~~~~~a~~~~~~Gf~~iK----ik~g~~~------~~~~~~~~~~ 186 (382)
T 1rvk_A 128 -RDKVLAYGSIMC-GDELEGG-L--------ATPEDYGRFAETLVKRGYKGIK----LHTWMPP------VSWAPDVKMD 186 (382)
T ss_dssp -CSEEEEEEEECC-CCCCTTT-T--------SSHHHHHHHHHHHHHHTCSEEE----EECCCTT------STTCCCHHHH
T ss_pred -CCcceecEEecc-Ccccccc-C--------CCHHHHHHHHHHHHHCCCCEEE----EcCCcCc------cccccchHHH
Confidence 667777543211 3322110 0 1112234455555555665554 4444210 1122233444
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCc
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQ 306 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~ 306 (445)
.+.++++|+++ | +++.|++|+| ++||.++++++ .+.++++++.|||||+++
T Consensus 187 ~e~v~avr~a~---g--~d~~l~vDan-----------------------~~~~~~~a~~~-~~~l~~~~i~~iE~P~~~ 237 (382)
T 1rvk_A 187 LKACAAVREAV---G--PDIRLMIDAF-----------------------HWYSRTDALAL-GRGLEKLGFDWIEEPMDE 237 (382)
T ss_dssp HHHHHHHHHHH---C--TTSEEEEECC-----------------------TTCCHHHHHHH-HHHHHTTTCSEEECCSCT
T ss_pred HHHHHHHHHHh---C--CCCeEEEECC-----------------------CCCCHHHHHHH-HHHHHhcCCCEEeCCCCh
Confidence 55555555554 5 5899999993 57888999998 467899999999999999
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccC-HHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTN-PKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~-~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
+|++++++|+++++ +||++||+. .+ +++++++++.+++|++++|++++||||++++++++|+++|++++++ +.|
T Consensus 238 ~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~--~~~ 312 (382)
T 1rvk_A 238 QSLSSYKWLSDNLD--IPVVGPESA-AGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH--GNT 312 (382)
T ss_dssp TCHHHHHHHHHHCS--SCEEECSSC-SSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC--CCS
T ss_pred hhHHHHHHHHhhCC--CCEEEeCCc-cCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec--CCC
Confidence 99999999999998 999999985 56 9999999999999999999999999999999999999999998765 456
Q ss_pred ChhhHHHHHHhhhcC
Q 043137 386 TEDTFIADLSVGLAT 400 (445)
Q Consensus 386 t~~~~~~~la~a~~~ 400 (445)
+. ++||++++..
T Consensus 313 ~~---~~~laaa~~~ 324 (382)
T 1rvk_A 313 AM---NLHVVAATKN 324 (382)
T ss_dssp HH---HHHHHHHCSS
T ss_pred CH---HHHHHHhCCc
Confidence 65 7899888753
No 98
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=6.6e-45 Score=367.48 Aligned_cols=293 Identities=19% Similarity=0.190 Sum_probs=226.3
Q ss_pred eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+.. +.+ +++++|+|+|| |++|||+++..+ .+.|+++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~~G~GE~~~~~-------------~~~~~~e~~~~~~~~ 66 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFGE-GLEGLGEGVMER-------------LPLYREETVAGARYL 66 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEECCCBS-------------SCSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEEC-CeEEEEEeccCC-------------CCcccCCCHHHHHHH
Confidence 8999999887642 222 35789999995 999999765421 123777888888888
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.+.|.|+|+|+.+++.+|+.|. .+. + +.+|++|||+||||+.||.+|+|||+||| |.. ..
T Consensus 67 i~~~l~~~l~G~d~~~~~~l~~~~~-~~~----------g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~-~~ 129 (369)
T 2zc8_A 67 LEEVFLPRVLGRDLPNPEALREALA-PFR----------G--NPMAKAVLEMAFFDLWAKALGRPLWQVLG---GVR-QA 129 (369)
T ss_dssp HHHTHHHHHTTCBCSSHHHHHHHHT-TSC----------S--CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCC-SE
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHH-Hhc----------C--ChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cc
Confidence 9888999999999999999988775 332 1 25799999999999999999999999999 863 45
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++ |++ |.+. +. +...+++.+...++|+.+| .|.| + +.+.+.+
T Consensus 130 ~~~~-~~~---g~~~----~~---------~~~~~~a~~~~~~G~~~iK----ik~~-------------~--~~d~~~v 173 (369)
T 2zc8_A 130 VEVG-VSL---GIQP----SV---------EDTLRVVERHLEEGYRRIK----LKIK-------------P--GWDYEVL 173 (369)
T ss_dssp EEBC-EEE---CCCS----SH---------HHHHHHHHHHHHTTCSCEE----EECB-------------T--TBSHHHH
T ss_pred eece-EEe---cCCC----CH---------HHHHHHHHHHHHhhhheee----eecC-------------h--hHHHHHH
Confidence 6665 332 2110 11 1223444444444454443 2211 2 2346667
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+++|+++ +++.|++|+| +.|+.++ +++ .+.++++++.|||||++++|++
T Consensus 174 ~avr~a~------~~~~l~vDan-----------------------~~~~~~~-~~~-~~~l~~~~i~~iEqP~~~~d~~ 222 (369)
T 2zc8_A 174 KAVREAF------PEATLTADAN-----------------------SAYSLAN-LAQ-LKRLDELRLDYIEQPLAYDDLL 222 (369)
T ss_dssp HHHHHHC------TTSCEEEECT-----------------------TCCCGGG-HHH-HHGGGGGCCSCEECCSCTTCSH
T ss_pred HHHHHHc------CCCeEEEecC-----------------------CCCCHHH-HHH-HHHHHhCCCcEEECCCCcccHH
Confidence 6666553 5788999993 5678888 887 5568999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. +++++++++++.+++|++|||++++||||++++++++|+++|+++|++|+ .|+.++.
T Consensus 223 ~~~~l~~~~~--ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~ 298 (369)
T 2zc8_A 223 DHAKLQRELS--TPICLDESL-TGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGM-LEAGVGR 298 (369)
T ss_dssp HHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCC-CCCHHHH
T ss_pred HHHHHHhhCC--CCEEEcCcc-CCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCc-cccHHHH
Confidence 9999999998 999999985 77999999999999999999999999999999999999999999999995 5887776
Q ss_pred HHHHHhh
Q 043137 391 IADLSVG 397 (445)
Q Consensus 391 ~~~la~a 397 (445)
.+.++++
T Consensus 299 aa~~hla 305 (369)
T 2zc8_A 299 AHNLHLA 305 (369)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5544444
No 99
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=1.2e-44 Score=366.00 Aligned_cols=296 Identities=16% Similarity=0.162 Sum_probs=219.0
Q ss_pred ceEEEEEEEEEEecC---------CC----CceEEEEEEeCCCceEEEec-cCCCccccccceeeccCCCCCCCccHHHH
Q 043137 2 AITITAVKARQIFDS---------RG----NPTVEVDVTTSDGHVARAAV-PSGASTGIYEALELRDGGSDYLGKGVSKA 67 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~---------~g----~~~v~V~v~td~G~~G~g~~-~~~~~~g~~e~~~~~~~~~~y~~~~~~~a 67 (445)
+|||++|+++.+..+ .+ +..++|+|+||+|++|||++ |.++. |.......+
T Consensus 9 sMKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~G~GE~~~~~~~---------------~~~~~~~~~ 73 (376)
T 4h2h_A 9 SLKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGPT---------------YAEAHAGGA 73 (376)
T ss_dssp CCBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSSS---------------SSSCCHHHH
T ss_pred CeEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCEEEEeecCCCCC---------------cchhhHHHH
Confidence 599999999887432 12 34689999999999999964 44322 333334444
Q ss_pred HHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCC
Q 043137 68 VSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK 147 (445)
Q Consensus 68 ~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~ 147 (445)
.. +.+.+.|.|+|+|+.+++..++... .+.+ ..+|+||||+||||+.||.+|+|||+||| |+.
T Consensus 74 ~~-~~~~l~~~l~g~d~~~~~~~~~~~~-~~~~------------~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~ 136 (376)
T 4h2h_A 74 LA-ALEVLASGLAGAEALPLPLHTRMDS-LLCG------------HNYAKSALDIAVHDLWGKRLGVPVHELLG---GAL 136 (376)
T ss_dssp HH-HHHHHHHTTTTCBSSHHHHHHHHHH-HCSC------------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCS
T ss_pred HH-HHHHHHHHhcCCccCcHHHHHHHHH-hhcc------------cHHHHHHHHHhhhHHHHHhcCCCceecCC---CCc
Confidence 44 4467999999999998875543333 2211 14699999999999999999999999999 988
Q ss_pred cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChH
Q 043137 148 NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENK 227 (445)
Q Consensus 148 ~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~ 227 (445)
++++|++.. ++.. + +++..+++.+...++|+++| .|+|. .+.+.+.
T Consensus 137 r~~v~~y~s--~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----iKvg~------------~~~~~di 182 (376)
T 4h2h_A 137 TDSVSSYYS--LGVM-------E---------PDEAARQALEKQREGYSRLQ----VKLGA------------RPIEIDI 182 (376)
T ss_dssp CSEEECEEE--ECSC-------C---------HHHHHHHHHHHHHHTCSEEE----EECCS------------SCHHHHH
T ss_pred CCceeEeee--cccC-------C---------HHHHHHHHHHHHhcCceEEE----EecCC------------CCHHHHH
Confidence 888888543 3211 1 12334556555555665544 45441 1122334
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcC
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQD 307 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~ 307 (445)
++++.+|++++ | +++.|++|+ |+.||.++++++. +.++++++ |||||++
T Consensus 183 ~~v~~vr~a~~--g--~~~~l~vDa-----------------------N~~~~~~~A~~~~-~~l~~~~~-~iEeP~~-- 231 (376)
T 4h2h_A 183 EAIRKVWEAVR--G--TGIALAADG-----------------------NRGWTTRDALRFS-RECPDIPF-VMEQPCN-- 231 (376)
T ss_dssp HHHHHHHHHHT--T--SCCEEEEEC-----------------------TTCCCHHHHHHHH-HHCTTSCE-EEESCSS--
T ss_pred HHHHHHHhhcc--C--CeeEEEEee-----------------------ccCCCHHHHHHHH-HHHhhccc-cccCCcc--
Confidence 55555555442 5 589999999 3678999999884 56788887 9999995
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCCh
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETE 387 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~ 387 (445)
+++++++|++.++ +||++||+. .++++++++++.+++|++|||++++||+|++++++++|+++|++++++| +.++.
T Consensus 232 ~~~~~~~l~~~~~--~pia~dE~~-~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~-~~~~~ 307 (376)
T 4h2h_A 232 SFEDLEAIRPLCH--HALYMDEDG-TSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDD-AWGGD 307 (376)
T ss_dssp SHHHHHHHGGGCC--SCEEESTTC-CSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBC-SSCSH
T ss_pred hhhhHhhhhhccc--CccccCccc-CCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCC-CCccH
Confidence 6889999999988 999999985 6799999999999999999999999999999999999999999987766 45676
Q ss_pred hhH--HHHHHhhh
Q 043137 388 DTF--IADLSVGL 398 (445)
Q Consensus 388 ~~~--~~~la~a~ 398 (445)
++. .+|++.+.
T Consensus 308 i~~aa~~hlaa~~ 320 (376)
T 4h2h_A 308 IVSAACTHIASTV 320 (376)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhC
Confidence 654 45555543
No 100
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=1.3e-44 Score=367.97 Aligned_cols=301 Identities=19% Similarity=0.239 Sum_probs=223.0
Q ss_pred ceEEEEEEEEEEec--------CCC----------CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCcc
Q 043137 2 AITITAVKARQIFD--------SRG----------NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKG 63 (445)
Q Consensus 2 ~mkI~~v~~~~v~~--------~~g----------~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~ 63 (445)
.|||++|+++.+.. +.+ +++++|+|+||+|++|||+++... +.+
T Consensus 12 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~----------------~~~-- 73 (393)
T 2og9_A 12 SDRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKR----------------AGG-- 73 (393)
T ss_dssp CCCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEES----------------TTH--
T ss_pred CCeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEecCcc----------------cch--
Confidence 38999999988842 111 356899999999999999875421 111
Q ss_pred HHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccc
Q 043137 64 VSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAEL 143 (445)
Q Consensus 64 ~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~ 143 (445)
......++ .++|.|+|+||.+++.+|+.|. .... .+|.+++..+|++|||+||||+.||.+|+|||+|||
T Consensus 74 -~~~~~~i~-~l~~~l~G~d~~~~~~i~~~l~-~~~~-----~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llG-- 143 (393)
T 2og9_A 74 -PGQFAHAR-EIAPALIGEDPSDIAKLWDKLC-WAGA-----SAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLG-- 143 (393)
T ss_dssp -HHHHHHHH-HHGGGGTTSCTTCHHHHHHHHH-HTTG-----GGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHC--
T ss_pred -HHHHHHHH-HHHHHHcCCChhhHHHHHHHHH-Hhhh-----hcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC--
Confidence 22233344 6999999999999999999998 4321 122344567899999999999999999999999999
Q ss_pred cCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc
Q 043137 144 SGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 223 (445)
Q Consensus 144 ~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~ 223 (445)
|. ++++|+ |+++ |+.+. .+. +...+++.+...++|+.+| .|.|. .+.
T Consensus 144 -g~-~~~vp~--y~~~-g~~~~---~~~---------e~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~ 190 (393)
T 2og9_A 144 -SY-RDSVRC--YNTS-GGFLH---TPI---------DQLMVNASASIERGIGGIK----LKVGQ------------PDG 190 (393)
T ss_dssp -CS-CSEEEE--EBCT-TCCTT---SCH---------HHHHHHHHHHHHTTCCCEE----EECCC------------SCH
T ss_pred -CC-CCceEE--EEEC-CCcCC---CCH---------HHHHHHHHHHHHcCCCEEE----EecCC------------CCH
Confidence 86 556665 5543 22110 111 1223444444334454433 23221 122
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.+.++++|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||
T Consensus 191 ~~~~e~v~avR~av---g--~d~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P 241 (393)
T 2og9_A 191 ALDIARVTAVRKHL---G--DAVPLMVDAN-----------------------QQWDRPTAQRMC-RIFEPFNLVWIEEP 241 (393)
T ss_dssp HHHHHHHHHHHHHH---C--TTSCEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSCEECC
T ss_pred HHHHHHHHHHHHHc---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEECC
Confidence 33455666555554 6 5899999993 578899999985 56899999999999
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
++++|++++++|+++++ +||++||+. .++++++++++.+++|+|++|++++||||++++++++|+++|++++ +|++
T Consensus 242 ~~~~~~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~-~h~~ 317 (393)
T 2og9_A 242 LDAYDHEGHAALALQFD--TPIATGEML-TSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLA-PHFA 317 (393)
T ss_dssp SCTTCHHHHHHHHHHCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSC
T ss_pred CCcccHHHHHHHHHhCC--CCEEeCCCc-CCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEe-ccCc
Confidence 99999999999999998 999999985 6799999999999999999999999999999999999999999986 4544
Q ss_pred CCChhhHHHHHHhhhcC
Q 043137 384 GETEDTFIADLSVGLAT 400 (445)
Q Consensus 384 ~et~~~~~~~la~a~~~ 400 (445)
.+ ..+||++++..
T Consensus 318 ~~----~~~~laaa~~~ 330 (393)
T 2og9_A 318 ME----LHVHLAAAYPR 330 (393)
T ss_dssp HH----HHHHHHHTSSS
T ss_pred cH----HHHHHHhhCCC
Confidence 43 46898887653
No 101
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=9.1e-45 Score=365.16 Aligned_cols=296 Identities=18% Similarity=0.204 Sum_probs=222.8
Q ss_pred eEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHH
Q 043137 3 ITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSN 70 (445)
Q Consensus 3 mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~ 70 (445)
|||++|+++.+. .+.+ +++++|+|+||+|++|||+++... +++. ++.+.
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~Ge~~~~~------------------~~~~-~~~~~ 64 (359)
T 1mdl_A 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYT------------------PVAL-KSLKQ 64 (359)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECSS------------------GGGH-HHHHH
T ss_pred CEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCEEEEEeecCC------------------CchH-HHHHH
Confidence 899999998773 2333 246899999999999999765321 2233 55667
Q ss_pred HHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 71 VNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 71 i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+++.++|.|+|+||.+++.+ +.|.+... + .++.++..+|++|||+||||+.||.+|+|||+||| |. +++
T Consensus 65 i~~~l~~~l~g~d~~~~~~~-~~l~~~~~---~---~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llG---g~-~~~ 133 (359)
T 1mdl_A 65 LLDDMAAMIVNEPLAPVSLE-AMLAKRFC---L---AGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLG---AN-ARP 133 (359)
T ss_dssp HHHHHHHHHTTSBSCHHHHH-HHHHHHTT---T---TCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CC-CCC
T ss_pred HHHHHHHHHCCCCccchHHH-HHHHHHHH---h---hccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhC---CC-CCC
Confidence 87789999999999999999 88873321 1 11223457899999999999999999999999999 86 566
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
+|++. ++ |.. +.+ ...+++.+...++|+.+| .|.|. .+.+.+.+.+
T Consensus 134 vp~~~--~~--g~~-----~~~---------~~~~~a~~~~~~Gf~~iK----ik~g~------------~~~~~~~e~v 179 (359)
T 1mdl_A 134 VQAYD--SH--SLD-----GVK---------LATERAVTAAELGFRAVK----TRIGY------------PALDQDLAVV 179 (359)
T ss_dssp EEEEE--EC--CSC-----HHH---------HHHHHHHHHHHTTCSEEE----EECCC------------SSHHHHHHHH
T ss_pred eeeee--ec--CCC-----CHH---------HHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHHH
Confidence 77643 32 210 111 123344444334444433 23321 1223345566
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+.+|+++ | +++.|++|+| ++||.+++++++ +.++++++.|||||++++|++
T Consensus 180 ~avr~a~---g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~~ 230 (359)
T 1mdl_A 180 RSIRQAV---G--DDFGIMVDYN-----------------------QSLDVPAAIKRS-QALQQEGVTWIEEPTLQHDYE 230 (359)
T ss_dssp HHHHHHH---C--SSSEEEEECT-----------------------TCSCHHHHHHHH-HHHHHHTCSCEECCSCTTCHH
T ss_pred HHHHHHh---C--CCCEEEEECC-----------------------CCCCHHHHHHHH-HHHHHhCCCeEECCCChhhHH
Confidence 6555554 5 5899999993 578889999885 568999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++ +. + +
T Consensus 231 ~~~~l~~~~~--iPI~~de~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~-~~-~---a 302 (359)
T 1mdl_A 231 GHQRIQSKLN--VPVQMGENW-LGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHL-FQ-E---I 302 (359)
T ss_dssp HHHHHHHTCS--SCEEECTTC-CSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS-CH-H---H
T ss_pred HHHHHHHhCC--CCEEeCCCC-CCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeecc-HH-H---H
Confidence 9999999988 999999985 6699999999999999999999999999999999999999999987664 32 2 6
Q ss_pred HHHHHhhhc
Q 043137 391 IADLSVGLA 399 (445)
Q Consensus 391 ~~~la~a~~ 399 (445)
.+|+++++.
T Consensus 303 ~~~laaa~~ 311 (359)
T 1mdl_A 303 SAHLLAATP 311 (359)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHHhCC
Confidence 788887765
No 102
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=2e-44 Score=371.57 Aligned_cols=314 Identities=16% Similarity=0.121 Sum_probs=219.4
Q ss_pred ceEEEEEEEEEEecC--C-----C-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFDS--R-----G-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~--~-----g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
+||||+|+++.|.-+ . | ...++|+|+||+|++|||+++.+ .....
T Consensus 8 ~~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi~G~GE~~~~-----------------------~~v~~ 64 (455)
T 3pfr_A 8 VPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGG-----------------------ATIEN 64 (455)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECS-----------------------HHHHH
T ss_pred CCEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCCEEEEeCCCc-----------------------HHHHH
Confidence 379999999998522 1 1 12468999999999999986421 12233
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHH--HhccCCCccccccccc-----chhhHHHHHHHHHHHHHHhcCCchhhhhcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQ--QLDGTVNEWGWCKQKL-----GANAILAVSLAVCKAGAHVKKIPLYKHIAE 142 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~--~l~~~~~~~~~~~~~~-----~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~ 142 (445)
.|+ .++|.|+|+||.+++++|+.|++ .+.+.. .|..+. ..+|+||||+||||+.||.+|+|||+|||
T Consensus 65 ~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~~----~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLG- 138 (455)
T 3pfr_A 65 ALT-EAIPHVVGRPISILNKIVNDMHNGYLDADYD----TFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLG- 138 (455)
T ss_dssp HHH-HHGGGTTTCBGGGHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGST-
T ss_pred HHH-HHHHHhcCCChhHHHHHHHHHHhhccccccC----CCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC-
Confidence 454 58999999999999999999983 111000 001111 16899999999999999999999999999
Q ss_pred ccC-CCcceeeeeeEEeecCcccCCCCcccc-e------ee-----eccCChhcHHHHHHHHH-HHHHHHHHHHHhhcCC
Q 043137 143 LSG-NKNLVLPVPAFNVINGGSHAGNKLAMQ-E------FM-----ILPVGASCFKEAMKMGV-EVYHHLKAVIKKKYGQ 208 (445)
Q Consensus 143 ~~G-~~~~~vp~~~~~~~~gg~~~~~~~~~~-e------~~-----~~p~~~~~~~~a~~~~~-~~~~~~k~~lk~k~G~ 208 (445)
| +.|+++|+|.+....|.. ....+... . .+ ..-.+++.++++.+... ++|+++| .|+|.
T Consensus 139 --gG~~r~~v~~y~~~~~~gd~-~~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~ 211 (455)
T 3pfr_A 139 --PGKQRDEVTVLGYLFYVGDD-KITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFK----LKGGV 211 (455)
T ss_dssp --TSCCCSEEEBCEEECCBCCG-GGSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEE----EECSS
T ss_pred --CCCcCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----EcCCC
Confidence 5 567889987654222210 00000000 0 00 00012223344443332 2454443 34331
Q ss_pred CCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHH
Q 043137 209 DATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLY 288 (445)
Q Consensus 209 ~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~ 288 (445)
.+.+.+.++++ ++|+++ +++.|++|+ |+.||.++++++
T Consensus 212 ------------~~~~~Di~~v~----avRea~--pd~~L~vDa-----------------------N~~w~~~~A~~~- 249 (455)
T 3pfr_A 212 ------------FEGSKEIDTVI----ELKKHF--PDARITLDP-----------------------NGCWSLDEAIQL- 249 (455)
T ss_dssp ------------SCHHHHHHHHH----HHHHHC--TTCCEEEEC-----------------------TTBSCHHHHHHH-
T ss_pred ------------CCHHHHHHHHH----HHHHhC--CCCeEeecC-----------------------CCCCCHHHHHHH-
Confidence 11222344444 455544 689999999 467899999987
Q ss_pred HHhhccCCeeeEECCCCcCC----HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHH
Q 043137 289 KSFISDYPIVSIEDPFDQDD----WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESI 364 (445)
Q Consensus 289 ~~~l~~~~i~~iEdP~~~~D----~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~ 364 (445)
.+.++++ +.|||||++++| ++++++|+++++ +||++||+ +++..+++++++.+++|++|+|+ ++||||+++
T Consensus 250 ~~~L~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~--iPIa~dE~-~~~~~~~~~~i~~~a~di~~~d~-~~GGit~a~ 324 (455)
T 3pfr_A 250 CKGLNDV-LTYAEDPCIGENGYSGREIMAEFRRRTG--IPTATNMI-ATNWREMCHAIMLQSVDIPLADP-HFWTLTGAS 324 (455)
T ss_dssp HTTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-CCSHHHHHHHHHHTCCSEEBCCH-HHHCHHHHH
T ss_pred HHhhccc-ceeeecCCChhhccchHHHHHHHHhcCC--CCEEeCCC-cCCHHHHHHHHHcCCCCEEEecC-CcCCHHHHH
Confidence 5678899 999999999999 799999999999 99999997 57799999999999999999998 799999999
Q ss_pred HHHHHHHHcCCcEEecCCCCCChhh--HHHHHHhhhc
Q 043137 365 EAVRMSKQAGWGVMASHRSGETEDT--FIADLSVGLA 399 (445)
Q Consensus 365 ~ia~~A~~~g~~~~~~~~~~et~~~--~~~~la~a~~ 399 (445)
+++++|+++|+++ .+|++.++.++ +++||+++++
T Consensus 325 kia~lA~a~gv~~-~~h~~~~~~i~~aa~~hlaaa~p 360 (455)
T 3pfr_A 325 RVAQLCNEWGLTW-GCHSNNHFDISLAMFSHVGAAAP 360 (455)
T ss_dssp HHHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999999999996 66766677655 4567776654
No 103
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=3e-45 Score=370.78 Aligned_cols=297 Identities=16% Similarity=0.165 Sum_probs=217.7
Q ss_pred CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCC------------CC
Q 043137 19 NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDP------------TE 86 (445)
Q Consensus 19 ~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~------------~~ 86 (445)
+++++|+| ||+|++|||++...+ .|.++++..+...++ .+.|.|+|+|| .+
T Consensus 30 ~~~v~V~v-td~G~~G~GE~~~~~---------------~~~~e~~~~~~~~l~-~~~~~l~g~d~~~~~~~~~~~~~~~ 92 (377)
T 2pge_A 30 KPTWFVRL-DIDGHGGQGEVSLIP---------------GLSLDPEEQIGRELD-LLARRLRAEEPIRLRQFLAERGGAD 92 (377)
T ss_dssp ECEEEEEE-EETTEEEEEEEECCT---------------TTCSSCHHHHHHHHH-HHHHHHHHSCCHHHHHHHHHTSSCT
T ss_pred cceEEEEE-EcCCCEEEEEeccCC---------------CCCcCCHHHHHHHHH-HHHHHHhCCCccchhhhhhcccccc
Confidence 46799999 999999999653211 255667777777787 68999999988 45
Q ss_pred HHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCC
Q 043137 87 QTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAG 166 (445)
Q Consensus 87 ~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~ 166 (445)
++.+|+.|. .++++.++|..+......+|++|||+||||+.||.+|+|||+||| |. ++++|+|. +++++
T Consensus 93 ~~~l~~~l~-~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llG---g~-~~~vp~~~--~i~~~---- 161 (377)
T 2pge_A 93 FSDYRSVLT-DIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFT---RG-EKRIPVNG--LIWMG---- 161 (377)
T ss_dssp TSCHHHHHH-HHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTT---TT-SCCEEBCE--EECCC----
T ss_pred HHHHHHhhh-hhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CC-CCeEEEeE--EecCC----
Confidence 577777775 332211112222233457899999999999999999999999999 86 56777755 34322
Q ss_pred CCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCe
Q 043137 167 NKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKV 246 (445)
Q Consensus 167 ~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i 246 (445)
++ + ..++++.+...++|+++| .|+|. .+ ..+.++.++.+.+.+|+ +++
T Consensus 162 ---~~-e--------~~~~~a~~~~~~G~~~~K----~Kvg~------------~~---~~~d~~~v~avr~~~g~-~~~ 209 (377)
T 2pge_A 162 ---EA-A--------FMQEQIEAKLAEGYGCLK----LKIGA------------ID---FDKECALLAGIRESFSP-QQL 209 (377)
T ss_dssp ---CH-H--------HHHHHHHHHHHTTCSEEE----EEC---------------C---HHHHHHHHHHHHHHSCT-TTC
T ss_pred ---CH-H--------HHHHHHHHHHHHhhhhhe----eecCC------------CC---hHHHHHHHHHHHHHcCC-CCc
Confidence 11 1 223455555555665554 34331 11 24445555332223452 379
Q ss_pred EEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEE
Q 043137 247 VIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIV 326 (445)
Q Consensus 247 ~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~ 326 (445)
.|++|+| +.||.+++++++ +.+++|++.|||||++++|+++|++|+++++ +||+
T Consensus 210 ~l~vDaN-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~--ipIa 263 (377)
T 2pge_A 210 EIRVDAN-----------------------GAFSPANAPQRL-KRLSQFHLHSIEQPIRQHQWSEMAALCANSP--LAIA 263 (377)
T ss_dssp EEEEECT-----------------------TBBCTTTHHHHH-HHHHTTCCSEEECCBCSSCHHHHHHHHHHCS--SCEE
T ss_pred eEEEECC-----------------------CCCCHHHHHHHH-HHHhcCCCcEEEccCCcccHHHHHHHHhhCC--CcEE
Confidence 9999993 567888999885 6789999999999999999999999999998 9999
Q ss_pred eCcccccCHHH--HHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcc
Q 043137 327 GDDLLVTNPKR--VEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 327 gde~~~~~~~~--~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
+||+.++ ..+ ++++++.+++|++|||++++||||++++++++|+++|++++++|+ .||+++.++.++++...+..
T Consensus 264 ~dE~~~~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~~a~~hlaa~~~~~ 340 (377)
T 2pge_A 264 LDEELIG-LGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERGIGFWITSA-LESNLGLAAIAQWTALYQPT 340 (377)
T ss_dssp ESGGGTT-CCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEBCC-SCCHHHHHHHHHHHHTTCCS
T ss_pred ECCccCC-cchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHHCCCeEEecCC-cccHHHHHHHHHHHHCCCCC
Confidence 9998655 566 889999999999999999999999999999999999999998885 78988766655555444443
No 104
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-44 Score=365.58 Aligned_cols=298 Identities=15% Similarity=0.194 Sum_probs=221.1
Q ss_pred Cc-eEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCc-cHHH
Q 043137 1 MA-ITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGK-GVSK 66 (445)
Q Consensus 1 ~~-mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~-~~~~ 66 (445)
|+ |||++|+++.+.. +.+ +++++|+|+||+|++|||+++. ++ +.
T Consensus 1 m~~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~Ge~~~--------------------~~~~~-- 58 (384)
T 2pgw_A 1 MSLVKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECTV--------------------APDQT-- 58 (384)
T ss_dssp ---CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEEC--------------------TTCHH--
T ss_pred CCCCEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCEEEEccCC--------------------CchHH--
Confidence 77 7999999987732 222 3578999999999999997752 11 12
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHH-HHHHhccCCCcccccc---cccchhhHHHHHHHHHHHHHHhcCCchhhhhcc
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNY-MVQQLDGTVNEWGWCK---QKLGANAILAVSLAVCKAGAHVKKIPLYKHIAE 142 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~-l~~~l~~~~~~~~~~~---~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~ 142 (445)
+...|++.++|.|+|+||.+++.+|+. |++... + .|+ .. ..+|++|||+||||+.||.+|+|||+|||
T Consensus 59 ~~~~i~~~l~~~l~g~d~~~~~~~~~~~l~~~~~---~---~g~~~~~~-~~~a~~aid~AlwDl~~k~~g~Pl~~llG- 130 (384)
T 2pgw_A 59 GTAAILYRLAKHLVGHSPHDVAPLIARIFHQEYL---G---HGANIMRA-ANQIFSGIDMAMWDLQGKLAGLPVHQLLG- 130 (384)
T ss_dssp HHHHHHHHHHGGGTTSCGGGHHHHHHHHHHHHTG---G---GTCCCHHH-HHHHHHHHHHHHHHHHHHHHTSBGGGTTT-
T ss_pred HHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHhh---h---cccccccc-cHHHHHHHHHHHHHHHHhHcCCCHHHHcC-
Confidence 455677789999999999999999998 853321 1 111 11 46899999999999999999999999999
Q ss_pred ccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCC
Q 043137 143 LSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPN 222 (445)
Q Consensus 143 ~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~ 222 (445)
|..++++|++ .+++++ +.+ ...+++.+...++|+.+| .|.| + +
T Consensus 131 --g~~~~~v~~~--~~~~~~-------~~e---------~~~~~a~~~~~~Gf~~iK----ik~g----------~---~ 173 (384)
T 2pgw_A 131 --GAHRKAVGYF--YFLQGE-------TAE---------ELARDAAVGHAQGERVFY----LKVG----------R---G 173 (384)
T ss_dssp --CCSSSEEEBC--EECCCS-------SHH---------HHHHHHHHHHHTTCCEEE----EECC----------S---C
T ss_pred --CCCCCceEEE--EECCCC-------CHH---------HHHHHHHHHHHcCCCEEE----ECcC----------C---C
Confidence 8766777764 333221 111 123344443333443332 2322 1 2
Q ss_pred ccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEEC
Q 043137 223 IQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIED 302 (445)
Q Consensus 223 ~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEd 302 (445)
.+.+.+.++ ++|++ . +++.|++|++ ++||.++++++ .+.++++++.||||
T Consensus 174 ~~~~~e~v~----avr~a-~-gd~~l~vD~n-----------------------~~~~~~~a~~~-~~~l~~~~i~~iEq 223 (384)
T 2pgw_A 174 EKLDLEITA----AVRGE-I-GDARLRLDAN-----------------------EGWSVHDAINM-CRKLEKYDIEFIEQ 223 (384)
T ss_dssp HHHHHHHHH----HHHTT-S-TTCEEEEECT-----------------------TCCCHHHHHHH-HHHHGGGCCSEEEC
T ss_pred HHHHHHHHH----HHHHH-c-CCcEEEEecC-----------------------CCCCHHHHHHH-HHHHHhcCCCEEeC
Confidence 222334444 44432 1 3688999993 57888999987 56789999999999
Q ss_pred CCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC
Q 043137 303 PFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~ 382 (445)
|++++|++++++|+++++ +||++||+. .++++++++++.+++|++++|++++||+|++++++++|+++|+++++++
T Consensus 224 P~~~~~~~~~~~l~~~~~--iPI~~de~i-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~- 299 (384)
T 2pgw_A 224 PTVSWSIPAMAHVREKVG--IPIVADQAA-FTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS- 299 (384)
T ss_dssp CSCTTCHHHHHHHHHHCS--SCEEESTTC-CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC-
T ss_pred CCChhhHHHHHHHHhhCC--CCEEEeCCc-CCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc-
Confidence 999999999999999998 999999985 6799999999999999999999999999999999999999999987765
Q ss_pred CCCChhhH--HHHHHhhhc
Q 043137 383 SGETEDTF--IADLSVGLA 399 (445)
Q Consensus 383 ~~et~~~~--~~~la~a~~ 399 (445)
+.|+.++. .+||+.+++
T Consensus 300 ~~es~i~~aa~~hlaaa~~ 318 (384)
T 2pgw_A 300 SFTTGITTCAEHHIGLAIP 318 (384)
T ss_dssp CSCCHHHHHHHHHHHHHCS
T ss_pred CcCCHHHHHHHHHHHHhCC
Confidence 57887765 556655543
No 105
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=4.7e-44 Score=364.85 Aligned_cols=275 Identities=16% Similarity=0.168 Sum_probs=210.5
Q ss_pred eEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhcc
Q 043137 21 TVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDG 100 (445)
Q Consensus 21 ~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~ 100 (445)
+++|+|+||+|++|||+++.+ ..++..+++.|+|.|+|+||.+++.+|+.|.+...+
T Consensus 71 ~v~V~v~td~G~~G~GE~~~g-----------------------~~~~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~~~~ 127 (415)
T 2p3z_A 71 TLIVEVEAENRQTGFAVSTAG-----------------------EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMY 127 (415)
T ss_dssp EEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCEEEEEecCC-----------------------HHHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhhc
Confidence 689999999999999977531 223345677899999999999999999999832211
Q ss_pred CCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccCC
Q 043137 101 TVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVG 180 (445)
Q Consensus 101 ~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~ 180 (445)
.. |++++..+|++|||+||||+.||.+|+|||+||| |..++++|+ |++ |+ +
T Consensus 128 ~~-----g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLG---G~~~~~vp~--y~~--g~-------~---------- 178 (415)
T 2p3z_A 128 YS-----GSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLG---GAVRDEIQF--YAT--GA-------R---------- 178 (415)
T ss_dssp TS-----TTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSSSEEEE--EEE--SS-------C----------
T ss_pred cc-----CCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCceee--eec--CC-------C----------
Confidence 11 2345667899999999999999999999999999 876777776 443 22 0
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccC
Q 043137 181 ASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGS 260 (445)
Q Consensus 181 ~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~ 260 (445)
.+++++ ++|+++| .|.| .++++++. +++.+.++++++|+++ | +++.|++|+|
T Consensus 179 ---~~~~~~---~G~~~~K----iK~g-----~g~~~G~~-~~~~d~~~v~avrea~---G--~~~~L~vDaN------- 230 (415)
T 2p3z_A 179 ---PDLAKE---MGFIGGK----MPTH-----WGPHDGDA-GIRKDAAMVADMREKC---G--PDFWLMLDCW------- 230 (415)
T ss_dssp ---HHHHHH---HTCSEEE----EECC-----CCGGGHHH-HHHHHHHHHHHHHHHH---C--SSSEEEEECT-------
T ss_pred ---HHHHHH---hCcceEE----Eecc-----cCcccccc-cHHHHHHHHHHHHHHh---C--CCCEEEEECC-------
Confidence 122333 2465554 3332 12222221 2233455566555554 6 5899999993
Q ss_pred CceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHH
Q 043137 261 DKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEK 340 (445)
Q Consensus 261 ~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~ 340 (445)
+.||.+++++++. .+++|++.|||||++++|+++|++|+++++.++||++||+. .+++++++
T Consensus 231 ----------------~~~~~~~Ai~~~~-~l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE~~-~~~~~~~~ 292 (415)
T 2p3z_A 231 ----------------MSQDVNYATKLAH-ACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHH-GTLQSFRT 292 (415)
T ss_dssp ----------------TCCCHHHHHHHHH-HHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CSHHHHHH
T ss_pred ----------------CCCCHHHHHHHHH-HHhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCCCC-CCHHHHHH
Confidence 5788899999865 58999999999999999999999999998755899999986 56999999
Q ss_pred HHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhc
Q 043137 341 AIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLA 399 (445)
Q Consensus 341 ~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~ 399 (445)
+++.+ +|++|||++++||||++++++++|+++|+++++ |++ ....+|+++++.
T Consensus 293 ~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~-h~~----~~a~~hlaaa~p 345 (415)
T 2p3z_A 293 LAETG-IDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVP-HGS----SVYSHHAVITFT 345 (415)
T ss_dssp HHHTT-CSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCC-CCC----HHHHHHHHTTCT
T ss_pred HHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEEe-cCh----HHHHHHHHHhCC
Confidence 99999 999999999999999999999999999999866 533 234678887664
No 106
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=4.6e-43 Score=362.79 Aligned_cols=321 Identities=17% Similarity=0.216 Sum_probs=214.9
Q ss_pred EEEEEEEEEEe--cC-----CC--Cce---EEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHH
Q 043137 4 TITAVKARQIF--DS-----RG--NPT---VEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNV 71 (445)
Q Consensus 4 kI~~v~~~~v~--~~-----~g--~~~---v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i 71 (445)
+||++++.+|. |+ .| .|. .+|+|+||+|++|||+++.+ ....+.|
T Consensus 27 ~i~~~~v~pva~~d~~l~~~~g~h~p~f~RtiV~v~Td~Gi~G~GE~~g~-----------------------~~~~~~l 83 (464)
T 4g8t_A 27 IITEMQVIPVAGHDSMLLNLSGAHSPYFTRNIVILKDNSGNTGVGEVPGG-----------------------EKIRQTL 83 (464)
T ss_dssp BEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC-----------------------HHHHHHH
T ss_pred EEeEEEEEEecCCCcccccCCcccCCccceEEEEEEECCCCEEEEeCCCc-----------------------HHHHHHH
Confidence 89999999984 32 22 232 47999999999999987531 1223345
Q ss_pred HHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCc---ccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCc
Q 043137 72 NAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNE---WGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN 148 (445)
Q Consensus 72 ~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~---~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~ 148 (445)
+ .++|.|+|+||.+++.+|+.|++.+...... +..+......+|+||||+||||+.||.+|+|||+|||. |+.|
T Consensus 84 e-~~~p~liG~dp~~ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGg--G~~R 160 (464)
T 4g8t_A 84 E-DAKPLVIGKTLGEYKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGD--GQQR 160 (464)
T ss_dssp H-HHGGGTTTCBGGGHHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTT--SCCC
T ss_pred H-HHHHHHcCCCHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC--CCCC
Confidence 4 5899999999999999999998544321100 00001123457999999999999999999999999982 4678
Q ss_pred ceeeeeeEEeecCcccCCCCcccc-------eeeecc-CChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCC
Q 043137 149 LVLPVPAFNVINGGSHAGNKLAMQ-------EFMILP-VGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFA 220 (445)
Q Consensus 149 ~~vp~~~~~~~~gg~~~~~~~~~~-------e~~~~p-~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~ 220 (445)
+++|++.+....+.... ..+... ..+... .......+.++...+.+. +.|....|+. -|.
T Consensus 161 d~V~~y~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~Gf~~~KlK-vG~-- 228 (464)
T 4g8t_A 161 DAVEMLGYLFFIGDRKK-TTLAYQNQENDPCDWYRVRHEEAMTPESVVRLAEAAYE--------KYGFNDFKLK-GGV-- 228 (464)
T ss_dssp SEEEBCEEECCBCCGGG-SCSCCCCCTTCSSHHHHHTTSCBCSHHHHHHHHHHHHH--------HHCCSCEEEE-CSS--
T ss_pred ceEEEEEEeeccCcccc-cchhhhcccccccchhhhcccccCCHHHHHHHHHHHHH--------HcCCCeEEEe-CCC--
Confidence 89999876543321100 000000 000000 000011222222211111 1232222211 011
Q ss_pred CCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeE
Q 043137 221 PNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSI 300 (445)
Q Consensus 221 ~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~i 300 (445)
.+ ..+.++.+ +++|++. +|+.|++|+ |+.||.++|+++ .+.++++ +.||
T Consensus 229 ~~---~~~di~~v-~avrea~--pd~~L~vDa-----------------------N~~wt~~~Ai~~-~~~le~~-l~wi 277 (464)
T 4g8t_A 229 LD---GFEEAEAV-TALAKRF--PDARITLDP-----------------------NGAWSLDEAVKI-GKQLKGV-LAYA 277 (464)
T ss_dssp SC---HHHHHHHH-HHHHHHS--TTCCEEEEC-----------------------TTCBCHHHHHHH-HHHTTTT-CSCE
T ss_pred CC---HHHHHHHH-HHHHhhC--CCceEEEEC-----------------------CCccCHHHHHHH-HHHhhhc-ccee
Confidence 11 23344444 3344433 578999999 367899999987 5667888 9999
Q ss_pred ECCCCcCCH----HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCc
Q 043137 301 EDPFDQDDW----EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWG 376 (445)
Q Consensus 301 EdP~~~~D~----~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~ 376 (445)
|||++++|. +.+++|+++++ +||++||+. .++++++++++.+++|++|+| +++||||++++++++|+++|++
T Consensus 278 EeP~~~~d~~~~~e~~a~lr~~~~--iPIa~gE~~-~~~~~~~~~i~~~avdi~~~d-~~~GGit~~~kia~lA~~~gi~ 353 (464)
T 4g8t_A 278 EDPCGAEQGYSGREIMAEFRRATG--LPTATNMIA-TDWRQMGHTISLQSVDIPLAD-PHFWTMQGSIRVAQMCHEWGLT 353 (464)
T ss_dssp ESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSSS-CSHHHHHHHHHHTCCSEEBCC-HHHHCHHHHHHHHHHHHHHTCC
T ss_pred ecCcCcccccchHHHHHhhhccCC--CCccccccc-cchhhHHHHHHhhCCCEEecc-ccccchHHHHHHHHHHHHcCCE
Confidence 999999885 78899999999 999999985 679999999999999999999 5899999999999999999999
Q ss_pred EEecCCCCCChhhH--HHHHHhhh
Q 043137 377 VMASHRSGETEDTF--IADLSVGL 398 (445)
Q Consensus 377 ~~~~~~~~et~~~~--~~~la~a~ 398 (445)
++ .|.+.++.++. ++||+.++
T Consensus 354 v~-~h~~~~~~I~laA~~hlaaa~ 376 (464)
T 4g8t_A 354 WG-SHSNNHFDISLAMFTHVAAAA 376 (464)
T ss_dssp CB-CCCCSCCHHHHHHHHHHHTTC
T ss_pred EE-EcCCcccHHHHHHHHHHHHhC
Confidence 75 45456776654 45665554
No 107
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7.7e-44 Score=363.35 Aligned_cols=303 Identities=13% Similarity=0.126 Sum_probs=219.2
Q ss_pred CceEEEEEEEEEEecCCC-------CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHH--HHHHHH
Q 043137 1 MAITITAVKARQIFDSRG-------NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVS--KAVSNV 71 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~~~g-------~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~--~a~~~i 71 (445)
|.|||++|+++.+..+.. +++++|+|+|| |++|||++++.+ |++++.. .+...|
T Consensus 1 m~mkI~~i~~~~~~~pl~~p~~~s~~~~~~V~v~td-G~~G~GE~~~~~----------------~~~~~~~~~~~~~~i 63 (401)
T 2hzg_A 1 MSLKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAG-GHIGWGECEAAP----------------LPSIAAFVCPKSHGV 63 (401)
T ss_dssp -CCBEEEEEEEEEECSSCCSSSCGGGEEEEEEEEET-TEEEEEEECSCH----------------HHHHHHHHCCCSBTT
T ss_pred CCCEEEEEEEEEEeccCCCccccccceEEEEEEEeC-CcEEEEeeeccc----------------CCcccchhHHHHHHH
Confidence 789999999998864432 35799999999 999999776421 0111111 223346
Q ss_pred HHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccc--cchh--hHHHHHHHHHHHHHHhcCCchhhhhccccCCC
Q 043137 72 NAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQK--LGAN--AILAVSLAVCKAGAHVKKIPLYKHIAELSGNK 147 (445)
Q Consensus 72 ~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~--~~~~--a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~ 147 (445)
++.++|.|+|+ |.+++ +.|.+.... .++.+ +..+ |++|||+||||+.||.+|+|||+||| |..
T Consensus 64 ~~~l~~~l~G~-~~~~~---~~l~~~~~~------~~~~g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~ 130 (401)
T 2hzg_A 64 CRPVSDSVLGQ-RLDGP---DDIARIAAL------VGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLG---YSA 130 (401)
T ss_dssp BCCGGGGTTTC-BCSSH---HHHHHHHHH------HHHHTTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSC
T ss_pred HHHHHHHhCCC-CCCHH---HHHHHHHHh------hccCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCC
Confidence 66789999999 99986 233311110 00011 3367 99999999999999999999999999 876
Q ss_pred cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCc-cCh
Q 043137 148 NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI-QEN 226 (445)
Q Consensus 148 ~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~-~~~ 226 (445)
++++|++.+ +.++. +.+ +..+++.+...++|+.+| .|. ..+ |+ ++ +.+
T Consensus 131 ~~~vp~~~~--~~~~~------~~~---------~~~~~a~~~~~~Gf~~iK----ik~----spv---G~---~~~~~~ 179 (401)
T 2hzg_A 131 SHGKRPYAS--LLFGD------TPQ---------ETLERARAARRDGFAAVK----FGW----GPI---GR---GTVAAD 179 (401)
T ss_dssp CCCBEEEEE--EECCS------SHH---------HHHHHHHHHHHTTCSEEE----EES----TTT---TS---SCHHHH
T ss_pred CCceEeeEE--cCCCC------CHH---------HHHHHHHHHHHhCCCeEE----EcC----CCC---CC---CHHHHH
Confidence 677887543 22210 122 223444444444554443 230 001 21 23 334
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCcc--CHHHHHHHHHHhhccCCeeeEECCC
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKI--SGDALKDLYKSFISDYPIVSIEDPF 304 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~--t~~~ai~~~~~~l~~~~i~~iEdP~ 304 (445)
.+.++++|+++ | +++.|++|+| ++| |.+++++++ +.++++++.|||||+
T Consensus 180 ~e~v~avr~a~---G--~d~~l~vDan-----------------------~~~~~~~~~a~~~~-~~l~~~~i~~iEqP~ 230 (401)
T 2hzg_A 180 ADQIMAAREGL---G--PDGDLMVDVG-----------------------QIFGEDVEAAAARL-PTLDAAGVLWLEEPF 230 (401)
T ss_dssp HHHHHHHHHHH---C--SSSEEEEECT-----------------------TTTTTCHHHHHTTH-HHHHHTTCSEEECCS
T ss_pred HHHHHHHHHHh---C--CCCeEEEECC-----------------------CCCCCCHHHHHHHH-HHHHhcCCCEEECCC
Confidence 56666666655 5 5899999993 578 889999985 558999999999999
Q ss_pred CcCCHHHHHHHHH-HhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 305 DQDDWEHYAKLTS-EVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 305 ~~~D~~~~~~L~~-~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
+++|++++++|++ +++ +||++||+. .++++++++++.+++|+++||++++||+|++++++++|+++|++++ +| +
T Consensus 231 ~~~d~~~~~~l~~~~~~--iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~-~h-~ 305 (401)
T 2hzg_A 231 DAGALAAHAALAGRGAR--VRIAGGEAA-HNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYV-NH-T 305 (401)
T ss_dssp CTTCHHHHHHHHTTCCS--SEEEECTTC-SSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-EC-C
T ss_pred CccCHHHHHHHHhhCCC--CCEEecCCc-CCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEe-cC-C
Confidence 9999999999999 887 999999985 5699999999999999999999999999999999999999999976 56 6
Q ss_pred CCChhhHHHHHHhhh
Q 043137 384 GETEDTFIADLSVGL 398 (445)
Q Consensus 384 ~et~~~~~~~la~a~ 398 (445)
.||.++.++.++++.
T Consensus 306 ~es~i~~~a~~hlaa 320 (401)
T 2hzg_A 306 FTSHLALSASLQPFA 320 (401)
T ss_dssp CSCHHHHHHHHGGGT
T ss_pred CCcHHHHHHHHHHHH
Confidence 899887665544443
No 108
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=3.2e-43 Score=357.79 Aligned_cols=306 Identities=17% Similarity=0.175 Sum_probs=219.9
Q ss_pred CceEEEEEEEEEEec------CC----CCceEEEEEEeC---CCceEEEeccCCCccccccceeeccCCCCCCCccHHHH
Q 043137 1 MAITITAVKARQIFD------SR----GNPTVEVDVTTS---DGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKA 67 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~------~~----g~~~v~V~v~td---~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a 67 (445)
|.|||++|+...+-. +. .+++++|+|+|| +|++|||+++.+ ++++++
T Consensus 4 m~mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~G~GE~~~~-----------------~~~~~~--- 63 (392)
T 1tzz_A 4 MSVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNS-----------------NGRYGQ--- 63 (392)
T ss_dssp --CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECC-----------------TTSCCC---
T ss_pred CCcEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCCEEEEEecCC-----------------CchHHH---
Confidence 779999999555422 11 235799999999 999999976542 112223
Q ss_pred HHHHHHhHhhhhcCCCC----------CCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchh
Q 043137 68 VSNVNAIIGPALAGKDP----------TEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLY 137 (445)
Q Consensus 68 ~~~i~~~l~p~LiG~d~----------~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~ 137 (445)
...+++.++|.|+|+|| .+++.+|+.|. ......+ ..+..+|++|||+||||+.||.+|+|||
T Consensus 64 ~~~i~~~l~~~l~G~d~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~------~~~~~~a~~aid~AlwDl~ak~~g~Pl~ 136 (392)
T 1tzz_A 64 GGLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMM-INEKPGG------HGERSVAVGTIDMAVWDAVAKIAGKPLF 136 (392)
T ss_dssp HHHHHHTHHHHHHTSCGGGSBCTTSSSBCHHHHHHHHT-TTCCSCC------CSHHHHHHHHHHHHHHHHHHHHHTSBHH
T ss_pred HHHHHHHHHHHHcCCCchhhhcccccccCHHHHHHHHH-HhccccC------ccHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 33466779999999999 99999999998 4322111 2255789999999999999999999999
Q ss_pred hhhccccCC-CcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCC
Q 043137 138 KHIAELSGN-KNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDE 216 (445)
Q Consensus 138 ~lLG~~~G~-~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~ 216 (445)
+|||..+|. .+.++|+ |++ +++.+.. .+. +...+++.+...++|+.+| .|.| .
T Consensus 137 ~llG~~~~g~~~~~v~~--y~~-~~~~~~~--~~~---------~~~~~~a~~~~~~Gf~~iK----ik~g-------~- 190 (392)
T 1tzz_A 137 RLLAERHGVKANPRVFV--YAA-GGYYYPG--KGL---------SMLRGEMRGYLDRGYNVVK----MKIG-------G- 190 (392)
T ss_dssp HHHHHHTTSCCCCEEEE--EEE-CCCC------CH---------HHHHHHHHHHHTTTCSEEE----EECS-------S-
T ss_pred HHcCCccCCCcCCCeeE--EEe-CCcccCC--CCH---------HHHHHHHHHHHHcCCCEEE----EcCC-------C-
Confidence 999844433 4455655 554 2221110 011 1223334333333443332 2322 1
Q ss_pred CCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCC
Q 043137 217 GGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYP 296 (445)
Q Consensus 217 g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~ 296 (445)
.+.+.+.+.++.+|+++ | +++.|++|+| ++||.+++++++ +.+++++
T Consensus 191 ----~~~~~~~e~v~avr~a~---g--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~ 237 (392)
T 1tzz_A 191 ----APIEEDRMRIEAVLEEI---G--KDAQLAVDAN-----------------------GRFNLETGIAYA-KMLRDYP 237 (392)
T ss_dssp ----SCHHHHHHHHHHHHHHH---T--TTCEEEEECT-----------------------TCCCHHHHHHHH-HHHTTSC
T ss_pred ----CCHHHHHHHHHHHHHhc---C--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHHcC
Confidence 12233455666555554 5 5899999993 578889999985 5689999
Q ss_pred eeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcC----CCCEEEeccCCcccHHHHHHHHHHHHH
Q 043137 297 IVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEK----TCNALLLKVNQIGSVTESIEAVRMSKQ 372 (445)
Q Consensus 297 i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~----a~d~v~ik~~~~GGit~a~~ia~~A~~ 372 (445)
+.|||||++++|++++++|+++++ +||++||+. +++++++++++.+ ++|++++|++++||||++++++++|++
T Consensus 238 i~~iEqP~~~~d~~~~~~l~~~~~--iPIa~dE~~-~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~~ 314 (392)
T 1tzz_A 238 LFWYEEVGDPLDYALQAALAEFYP--GPMATGENL-FSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKT 314 (392)
T ss_dssp CSEEECCSCTTCHHHHHHHTTTCC--SCEEECTTC-CSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHHH
T ss_pred CCeecCCCChhhHHHHHHHHhhCC--CCEEECCCC-CCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHHHH
Confidence 999999999999999999999988 999999985 7799999999999 999999999999999999999999999
Q ss_pred cCCc---EEecCCCCCChhhHHHHHHhhhcC
Q 043137 373 AGWG---VMASHRSGETEDTFIADLSVGLAT 400 (445)
Q Consensus 373 ~g~~---~~~~~~~~et~~~~~~~la~a~~~ 400 (445)
+|++ +++++ .+. ..+|++.++..
T Consensus 315 ~gi~~~~~~~~~----~~~-~~~hl~aa~~~ 340 (392)
T 1tzz_A 315 HGWSPSRCIPHG----GHQ-MSLNIAAGLGL 340 (392)
T ss_dssp TTCCGGGBCCSC----CBH-HHHHHHHHHTC
T ss_pred CCCCCceEeecH----HHH-HHHHHHHhCCC
Confidence 9999 97653 112 24788877653
No 109
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=3.5e-43 Score=362.56 Aligned_cols=303 Identities=18% Similarity=0.203 Sum_probs=215.7
Q ss_pred eEEEEEEEEEEecCC--------------CCceEEEEEEeCC--CceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 3 ITITAVKARQIFDSR--------------GNPTVEVDVTTSD--GHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 3 mkI~~v~~~~v~~~~--------------g~~~v~V~v~td~--G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
|||++|+++.+..+. ...+++|+|+||+ |++|||++++. | + +.+.
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~G~Ge~~~~---g-------------~---~~~~ 62 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFTI---G-------------R---GNDV 62 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEEC---S-------------T---THHH
T ss_pred CcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCEEEEeecCC---C-------------C---CcHH
Confidence 799999999885321 1246899999998 99999976431 1 1 1233
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHH----HHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhcc
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTA----IDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAE 142 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~----i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~ 142 (445)
+...++ .++|.|+|+||.+++. +|+.|. ...+.. |..+..++..+|++|||+||||+.||.+|+|||+|||
T Consensus 63 v~~~i~-~l~~~liG~d~~~~~~~~~~~~~~l~-~~~~~~--~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG- 137 (441)
T 2hxt_A 63 QTAAVA-ALAEHVVGLSVDKVIADLGAFARRLT-NDSQLR--WLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIA- 137 (441)
T ss_dssp HHHHHH-TTHHHHTTCBHHHHHHCHHHHHHHHH-TCHHHH--HTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHH-
T ss_pred HHHHHH-HHHHHHcCCChHHHHhhHHHHHHHHH-hccccc--cccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc-
Confidence 344454 7999999999999875 566665 211100 0000122335899999999999999999999999999
Q ss_pred ccCCCccee---------------------------------------eeeeEEeecCcccCCCCcccceeeeccCChhc
Q 043137 143 LSGNKNLVL---------------------------------------PVPAFNVINGGSHAGNKLAMQEFMILPVGASC 183 (445)
Q Consensus 143 ~~G~~~~~v---------------------------------------p~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~ 183 (445)
|..+..+ ++|+|++..|+.. .+. ++.
T Consensus 138 --G~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~----~~~---------e~~ 202 (441)
T 2hxt_A 138 --ELTPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLG----YSD---------EKL 202 (441)
T ss_dssp --TSCHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTT----SCH---------HHH
T ss_pred --CCCcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEecccccC----CCH---------HHH
Confidence 8643221 4556665322210 111 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCce
Q 043137 184 FKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKT 263 (445)
Q Consensus 184 ~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~ 263 (445)
.+++.+...++|+.+| .|.| + +.+.+.+.++++|+++ | +++.|++|+|
T Consensus 203 ~~~a~~~~~~Gf~~vK----ik~g----------~---~~~~d~e~v~avR~a~---G--~d~~l~vDan---------- 250 (441)
T 2hxt_A 203 VRLAKEAVADGFRTIK----LKVG----------A---NVQDDIRRCRLARAAI---G--PDIAMAVDAN---------- 250 (441)
T ss_dssp HHHHHHHHHTTCSEEE----EECC----------S---CHHHHHHHHHHHHHHH---C--SSSEEEEECT----------
T ss_pred HHHHHHHHHcCCCEEE----EccC----------C---CHHHHHHHHHHHHHhc---C--CCCeEEEECC----------
Confidence 4455554444555443 3332 1 1233455666665554 5 5899999993
Q ss_pred eeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHH
Q 043137 264 YDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAI 342 (445)
Q Consensus 264 y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i 342 (445)
++||.+++++++ +.++++++.|||||++++|++++++|++++ + +||++||+ +++++++++++
T Consensus 251 -------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~--iPIa~dE~-~~~~~~~~~~i 313 (441)
T 2hxt_A 251 -------------QRWDVGPAIDWM-RQLAEFDIAWIEEPTSPDDVLGHAAIRQGITP--VPVSTGEH-TQNRVVFKQLL 313 (441)
T ss_dssp -------------TCCCHHHHHHHH-HTTGGGCCSCEECCSCTTCHHHHHHHHHHHTT--SCEEECTT-CCSHHHHHHHH
T ss_pred -------------CCCCHHHHHHHH-HHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCC--CCEEEeCC-cCCHHHHHHHH
Confidence 578899999985 568999999999999999999999999998 6 99999998 57899999999
Q ss_pred hcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH-HHHHH
Q 043137 343 KEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF-IADLS 395 (445)
Q Consensus 343 ~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~-~~~la 395 (445)
+.+++|+++||++++||||++++++++|+++|+++ ++|.+ ....+. ..|++
T Consensus 314 ~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~-~~h~~-~~~~~~~~~~~a 365 (441)
T 2hxt_A 314 QAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRV-FPHAG-GVGLCELVQHLA 365 (441)
T ss_dssp HHTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEE-CCCCC-STTHHHHHHHHH
T ss_pred HcCCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeE-EEecC-hHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 56743 333332 33554
No 110
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=2.6e-43 Score=351.20 Aligned_cols=275 Identities=20% Similarity=0.277 Sum_probs=203.7
Q ss_pred CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCC-CCCCHHHHHHHHHHH
Q 043137 19 NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGK-DPTEQTAIDNYMVQQ 97 (445)
Q Consensus 19 ~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~-d~~~~e~i~~~l~~~ 97 (445)
+..++|+| ||+|++|||++...+ |++++...+.+.+++ +. |+|+ ||.+++++|+.|. .
T Consensus 26 ~~~~~V~v-td~G~~G~GE~~~~~----------------~~ge~~~~~~~~l~~-~~--l~g~~d~~~~e~~~~~l~-~ 84 (338)
T 3ijl_A 26 TPDVQVEI-EYEGVTGYGEASMPP----------------YLGETVESVMNFLKK-VN--LEQFSDPFQLEDILSYVD-S 84 (338)
T ss_dssp ECEEEEEE-EETTEEEEEEEECCG----------------GGSCCHHHHHHHHTT-CC--CTTCCCTTCHHHHHHHHH-H
T ss_pred eeEEEEEE-EeCCcEEEEeeeCCC----------------CCCCCHHHHHHHHHH-HH--hcCCCCccCHHHHHHHHH-H
Confidence 36799999 999999999654321 334455665555543 22 8999 9999999999998 3
Q ss_pred hccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeec
Q 043137 98 LDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMIL 177 (445)
Q Consensus 98 l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~ 177 (445)
.. ....+|++||||||||+.||.+|+|||+||| |. ++++|.+.+++ |. ..
T Consensus 85 ~~-----------~~~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~-~~~v~~~~~~~---~~------~~------ 134 (338)
T 3ijl_A 85 LS-----------PKDTAAKAAVDIALHDLVGKLLGAPWYKIWG---LN-KEKTPSTTFTI---GI------DT------ 134 (338)
T ss_dssp TC-----------SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-GGGCCBBCCBC---CC------CC------
T ss_pred hc-----------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCcceEEEEE---eC------CC------
Confidence 21 1236899999999999999999999999999 87 56777644432 11 00
Q ss_pred cCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEecccccc
Q 043137 178 PVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEF 257 (445)
Q Consensus 178 p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~ 257 (445)
+++..+++.+.. ++|+++ |.|+|. +.+.++++++|+++ ++.|++|+
T Consensus 135 --~e~~~~~a~~~~-~g~~~~----K~Kvg~---------------~~d~~~v~avR~~~-------~~~l~vDa----- 180 (338)
T 3ijl_A 135 --PDVVRAKTKECA-GLFNIL----KVKLGR---------------DNDKEMIETIRSVT-------DLPIAVDA----- 180 (338)
T ss_dssp --HHHHHHHHHHHH-TTCSSE----EEECSS---------------SCHHHHHHHHHTTC-------CCCEEEEC-----
T ss_pred --HHHHHHHHHHHH-hcccEE----EEecCc---------------HHHHHHHHHHHhhc-------CCcEEEEC-----
Confidence 111222332221 134333 244331 23456665555442 36899999
Q ss_pred ccCCceeeecccCCCCCCCCccC-HHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHH
Q 043137 258 YGSDKTYDLNFKEENNDGSQKIS-GDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPK 336 (445)
Q Consensus 258 ~~~~~~y~~~~~~~~~~~~~~~t-~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~ 336 (445)
|+.|| .++++++ .+.++++++.|||||++++|++++++|+++++ +||++||+. .+++
T Consensus 181 ------------------N~~~t~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~--ipIa~dE~~-~~~~ 238 (338)
T 3ijl_A 181 ------------------NQGWKDRQYALDM-IHWLKEKGIVMIEQPMPKEQLDDIAWVTQQSP--LPVFADESL-QRLG 238 (338)
T ss_dssp ------------------TTCCCCHHHHHHH-HHHHHHTTEEEEECCSCTTCHHHHHHHHHTCS--SCEEESTTC-CSGG
T ss_pred ------------------cCCCCCHHHHHHH-HHHHhhCCCCEEECCCCCCcHHHHHHHHhcCC--CCEEECCCC-CCHH
Confidence 46784 8999988 45689999999999999999999999999998 999999986 5588
Q ss_pred HHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcc
Q 043137 337 RVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 337 ~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
++++++ +++|++|||++++||||++++++++|+++|+++++++ +.|+..+.++.++++...++.
T Consensus 239 ~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 302 (338)
T 3ijl_A 239 DVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMVGC-MTETSCAISAASQFSPAVDFA 302 (338)
T ss_dssp GTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHTTGGGCSEE
T ss_pred HHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHHHHHHhccCCcc
Confidence 998885 7999999999999999999999999999999998766 578887766666655545554
No 111
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=5.3e-42 Score=348.58 Aligned_cols=295 Identities=16% Similarity=0.141 Sum_probs=210.1
Q ss_pred CceEEEEEEEEEEec--------C--CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHH
Q 043137 1 MAITITAVKARQIFD--------S--RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVS 65 (445)
Q Consensus 1 ~~mkI~~v~~~~v~~--------~--~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~ 65 (445)
|.|||++|+++.+.. + .+ +++++|+|+|| |++|||+++ +
T Consensus 10 ~~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~G~GE~~-g------------------------ 63 (392)
T 3p3b_A 10 SDWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSI-H------------------------ 63 (392)
T ss_dssp TTCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECC-S------------------------
T ss_pred CCCeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCEEEEecc-c------------------------
Confidence 459999999987732 1 11 45789999999 999998764 1
Q ss_pred HHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccC
Q 043137 66 KAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG 145 (445)
Q Consensus 66 ~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G 145 (445)
.|+ .++|.|+|+||.+++.+| . ++..+|++|||+||||+.||.+|+|||+||| |
T Consensus 64 ----~i~-~l~p~l~G~d~~~~~~~~---~---------------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g 117 (392)
T 3p3b_A 64 ----MTP-EWAEDVIGRRLLDLFDDR---G---------------RLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---G 117 (392)
T ss_dssp ----CCH-HHHHTTTTCBGGGGBCTT---S---------------CBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC----
T ss_pred ----HHH-HHHHHhcCCCHHHHHHHH---h---------------HHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---C
Confidence 134 588999999998877654 1 1235799999999999999999999999999 8
Q ss_pred ----CC-cceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCC
Q 043137 146 ----NK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFA 220 (445)
Q Consensus 146 ----~~-~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~ 220 (445)
.. ++++|++......|+.+..+.+++++ ...+++.+...++|+.+| .|. +..++|.
T Consensus 118 ~~~~~~~~~~vp~~~s~~~~~~~~~~~~~~~~e--------~~~~~a~~~~~~Gf~~vK----ik~-------g~~~~~~ 178 (392)
T 3p3b_A 118 AHLETGASLVVPCYDTSLYFDDLHLADERAAVA--------LMQEEAMQGYAKGQRHFK----IKV-------GRGGRHM 178 (392)
T ss_dssp -------CEEEEEEEEEECBTTTTCCSHHHHHH--------HHHHHHHHHHHTTCCCEE----EEC-------CHHHHTS
T ss_pred ccccccccCCcceeEeecccCCCCcccccchHH--------HHHHHHHHHHHhCCCEEE----ECc-------CcCcccC
Confidence 54 67787754211111110000000111 123344444334444433 232 2222222
Q ss_pred CCccChHHHHHHHHHHHHH-hCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeee
Q 043137 221 PNIQENKEGLELLNTAIAK-AGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVS 299 (445)
Q Consensus 221 ~~~~~~~~~l~~l~~av~~-~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~ 299 (445)
++.......++.++ ++|+ +| +++.|++|+| ++||.+++++++ +.++++++.|
T Consensus 179 ~~~~~~~~~~e~v~-avR~~~g--~d~~l~vDan-----------------------~~~~~~~ai~~~-~~l~~~~i~~ 231 (392)
T 3p3b_A 179 PLWEGTKRDIAIVR-GISEVAG--PAGKIMIDAN-----------------------NAYNLNLTKEVL-AALSDVNLYW 231 (392)
T ss_dssp CHHHHHHHHHHHHH-HHHHHHC--TTCCEEEECT-----------------------TCCCHHHHHHHH-HHTTTSCEEE
T ss_pred CccccHHHHHHHHH-HHHHHhC--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCE
Confidence 21112233444443 3333 56 5899999993 578899999985 5589999999
Q ss_pred EECCCCcCCHHHHHHHHHH-----hCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcC
Q 043137 300 IEDPFDQDDWEHYAKLTSE-----VGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAG 374 (445)
Q Consensus 300 iEdP~~~~D~~~~~~L~~~-----~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g 374 (445)
||||++ +|++++++|+++ ++ +||++|| . +++++++++++.+++|++++|++++ |+|++++++++|+++|
T Consensus 232 iE~P~~-~d~~~~~~l~~~l~~~g~~--iPIa~dE-~-~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~~A~~~g 305 (392)
T 3p3b_A 232 LEEAFH-EDEALYEDLKEWLGQRGQN--VLIADGE-G-LASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGEKLDAHG 305 (392)
T ss_dssp EECSSS-CCHHHHHHHHHHHHHHTCC--CEEEECC-S-SCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHHHHHHTT
T ss_pred EecCCc-ccHHHHHHHHHhhccCCCC--ccEEecC-C-CCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHHHHHHcC
Confidence 999999 999999999999 77 9999999 5 6689999999999999999999999 9999999999999999
Q ss_pred CcEEecCCCCCChhhHHHHHHhhhcCC
Q 043137 375 WGVMASHRSGETEDTFIADLSVGLATG 401 (445)
Q Consensus 375 ~~~~~~~~~~et~~~~~~~la~a~~~~ 401 (445)
+++++ | +.|+.++.+++++++...+
T Consensus 306 i~~~~-h-~~es~i~~~a~l~laa~~~ 330 (392)
T 3p3b_A 306 LRSAP-H-CYGNAYGIYASGHLSAAVR 330 (392)
T ss_dssp CEECC-B-CCSCTHHHHHHHHHGGGCT
T ss_pred CEEEe-c-CCCCHHHHHHHHHHHHhCC
Confidence 99866 6 6899888777777665444
No 112
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=6e-41 Score=340.12 Aligned_cols=293 Identities=16% Similarity=0.146 Sum_probs=203.2
Q ss_pred ceEEEEEEEEEEe--------cC--CC-----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHH
Q 043137 2 AITITAVKARQIF--------DS--RG-----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSK 66 (445)
Q Consensus 2 ~mkI~~v~~~~v~--------~~--~g-----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~ 66 (445)
.|||++|+++.+. .+ .| +..++|+|+|| |++|||++... .
T Consensus 11 ~mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~G~GE~~~~----------------------~-- 65 (392)
T 3v5c_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSIHM----------------------T-- 65 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECCSC----------------------C--
T ss_pred CcEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCEEEEeecCc----------------------H--
Confidence 3899999998873 11 33 24589999999 99999976531 0
Q ss_pred HHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCC
Q 043137 67 AVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGN 146 (445)
Q Consensus 67 a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~ 146 (445)
+.++|.|+|+||.++. .. .+.+..+|++|||+||||+.||.+|+|||+||| |+
T Consensus 66 ------~~l~~~liG~d~~~~~--------~~----------~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLG---G~ 118 (392)
T 3v5c_A 66 ------PEWAEDVIGRRLLDLF--------DD----------RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GA 118 (392)
T ss_dssp ------HHHHHTTTTCBGGGGB--------CT----------TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHS---CC
T ss_pred ------HHHHHHhCCCCHHHHH--------hh----------ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CC
Confidence 2478999999996531 11 123446899999999999999999999999999 98
Q ss_pred Ccce---eeeeeEEeecCcccCCCCcccceeeecc-CChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCC-
Q 043137 147 KNLV---LPVPAFNVINGGSHAGNKLAMQEFMILP-VGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAP- 221 (445)
Q Consensus 147 ~~~~---vp~~~~~~~~gg~~~~~~~~~~e~~~~p-~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~- 221 (445)
.+++ +++|+|++.. +... ....+ -| ..++..+++.+...++|+++| .|+| ..+.+.+
T Consensus 119 ~r~~~~~v~v~~y~~~~-~~~~---~~~~~---~~~~~e~~~~~a~~~~~~Gf~~~K----lKvg-------~~~~~~~~ 180 (392)
T 3v5c_A 119 HLETGASLVVPCYDTSL-YFDD---LHLAD---ERAAVALMQEEAMQGYAKGQRHFK----IKVG-------RGGRHMPL 180 (392)
T ss_dssp CSCCCCCEEEEEEEEEE-CBTT---TTCCC---HHHHHHHHHHHHHHHHHTTCCCEE----EECC-------TTTTTSCH
T ss_pred CCcccccceEEEEEeec-cccc---ccccc---cccCHHHHHHHHHHHHHCCCCEEE----ECCC-------CCCccccc
Confidence 7766 2244454311 1100 00000 00 001223344444444555543 3433 2222211
Q ss_pred --CccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeee
Q 043137 222 --NIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVS 299 (445)
Q Consensus 222 --~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~ 299 (445)
+++.+.++++++|+++ | +++.|++|+ |+.||.++++++ .+.+++|++.|
T Consensus 181 ~~~~~~d~~~v~avR~a~---g--~~~~l~vDa-----------------------N~~w~~~~A~~~-~~~L~~~~l~~ 231 (392)
T 3v5c_A 181 WEGTKRDIAIVRGISEVA---G--PAGKIMIDA-----------------------NNAYNLNLTKEV-LAALSDVNLYW 231 (392)
T ss_dssp HHHHHHHHHHHHHHHHHH---C--TTCCEEEEC-----------------------TTCCCHHHHHHH-HHHTTTSCCCE
T ss_pred cccHHHHHHHHHHHHHHc---C--CCCcEEeeC-----------------------CCCcCHHHHHHH-HHhcccCCCeE
Confidence 1223344554444443 6 689999999 467899999988 45689999999
Q ss_pred EECCCCcCCHHHHHHHHHHh---CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCc
Q 043137 300 IEDPFDQDDWEHYAKLTSEV---GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWG 376 (445)
Q Consensus 300 iEdP~~~~D~~~~~~L~~~~---~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~ 376 (445)
||||++ +|++++++|++++ ..++||++||+. . .++++++++.+++|++|+|+++ ||||++++++++|+++|++
T Consensus 232 iEeP~~-~d~~~~~~l~~~~~~~~~~ipIa~gE~~-~-~~~~~~li~~~a~dii~~d~~~-GGitea~kia~~A~~~gv~ 307 (392)
T 3v5c_A 232 LEAAFH-EDEALYEDLKEWLGQRGQNVLIADGEGL-A-SPHLIEWATRGRVDVLQYDIIW-PGFTHWMELGEKLDAHGLR 307 (392)
T ss_dssp EECSSS-CCHHHHHHHHHHHHHHTCCCEEEECCSS-C-CTTHHHHHHTTSCCEECCBTTT-BCHHHHHHHHHHHHHTTCE
T ss_pred EeCCCC-cCHHHHHHHHHhhccCCCCCcEECCCcc-c-HHHHHHHHHcCCCcEEEeCCCC-CCHHHHHHHHHHHHHcCCe
Confidence 999998 6899999999873 123999999985 4 6899999999999999999999 9999999999999999999
Q ss_pred EEecCCCCCChhhH--HHHHHhhhc
Q 043137 377 VMASHRSGETEDTF--IADLSVGLA 399 (445)
Q Consensus 377 ~~~~~~~~et~~~~--~~~la~a~~ 399 (445)
+++ |++ ++.++. .+||+++++
T Consensus 308 ~~~-h~~-~s~i~~aa~~hlaaa~p 330 (392)
T 3v5c_A 308 SAP-HCY-GNAYGIYASGHLSAAVR 330 (392)
T ss_dssp ECC-BCC-SCTHHHHHHHHHGGGCT
T ss_pred EEe-cCC-CcHHHHHHHHHHHHhCC
Confidence 865 533 566554 456655543
No 113
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=1.7e-41 Score=344.62 Aligned_cols=292 Identities=15% Similarity=0.163 Sum_probs=209.3
Q ss_pred CceEEEEEEEEEEe--------cCCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHH
Q 043137 1 MAITITAVKARQIF--------DSRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV 68 (445)
Q Consensus 1 ~~mkI~~v~~~~v~--------~~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~ 68 (445)
|.|||++|+++.+. .+.+ +++++|+|+||+|++|||+++. +|. +.|. ...+.
T Consensus 1 m~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~---~g~----------~~~~---~~~~~ 64 (389)
T 2oz8_A 1 MSLSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQT---LFN----------PLPD---QQEIE 64 (389)
T ss_dssp --CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEE---SSS----------CCCC---HHHHH
T ss_pred CCCEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCEEEEEecc---CCC----------cccc---HHHHH
Confidence 88999999998773 2333 3568999999999999997643 111 1122 23556
Q ss_pred HHHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCccccccccc----chhhHHHHHHHHHHHHHHhcCCchhhhhcccc
Q 043137 69 SNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKL----GANAILAVSLAVCKAGAHVKKIPLYKHIAELS 144 (445)
Q Consensus 69 ~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~----~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~ 144 (445)
..+++.++|.|+|+|+.++ +. .+++. ..+. ..+|++|||+||||+.||.+|+|||+|||
T Consensus 65 ~~i~~~l~p~l~G~d~~~~------~~-~~~~~-------~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLG--- 127 (389)
T 2oz8_A 65 SVFEHEVWPSLKGNRAIAL------VH-RVNRP-------RGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLG--- 127 (389)
T ss_dssp HHHHHHTHHHHTTSCHHHH------TT-CCCCC-------C------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTT---
T ss_pred HHHHHHHHHHHcCCCHHHH------HH-HHhcc-------CCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---
Confidence 6678889999999998665 22 22110 1122 56899999999999999999999999999
Q ss_pred CCCcceeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCcc
Q 043137 145 GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQ 224 (445)
Q Consensus 145 G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~ 224 (445)
|. ++++|+ |++ +|.+. .+. ++..+++.+...++|+.+| .|.|. .+++
T Consensus 128 g~-~~~vp~--y~~--~~~~~---~~~---------~~~~~~a~~~~~~Gf~~vK----ik~g~------------~~~~ 174 (389)
T 2oz8_A 128 SR-RNRVKA--YAS--GLDFH---LDD---------DAFVSLFSHAASIGYSAFK----IKVGH------------RDFD 174 (389)
T ss_dssp CS-CSEEEE--EEE--CCBTT---CCH---------HHHHHHHHHHHHTTCCEEE----EECCC------------SSHH
T ss_pred CC-CCceEE--EEe--CCCcC---CCH---------HHHHHHHHHHHHhCCCEEE----EccCC------------CCHH
Confidence 86 456665 544 23210 111 2223444444444554443 33331 1222
Q ss_pred ChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhcc--CCeeeEEC
Q 043137 225 ENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISD--YPIVSIED 302 (445)
Q Consensus 225 ~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~--~~i~~iEd 302 (445)
.+.+.++.+|++ +| +++.|++|+| ++||.+++++++ +.+++ +++.||||
T Consensus 175 ~~~e~v~avR~a---~G--~~~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~g~~i~~iEq 225 (389)
T 2oz8_A 175 RDLRRLELLKTC---VP--AGSKVMIDPN-----------------------EAWTSKEALTKL-VAIREAGHDLLWVED 225 (389)
T ss_dssp HHHHHHHHHHTT---SC--TTCEEEEECT-----------------------TCBCHHHHHHHH-HHHHHTTCCCSEEES
T ss_pred HHHHHHHHHHHh---hC--CCCeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCceEEeC
Confidence 233444433333 45 5899999993 578889999985 56888 99999999
Q ss_pred CCCcCCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 303 PFDQDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 303 P~~~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
|++++|++++++|++++ + +||++||+. ++++++++++.+++|++++| ||||++++++++|+++|++++++|
T Consensus 226 P~~~~~~~~~~~l~~~~~~--iPIa~dE~~--~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~~ 297 (389)
T 2oz8_A 226 PILRHDHDGLRTLRHAVTW--TQINSGEYL--DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGN 297 (389)
T ss_dssp CBCTTCHHHHHHHHHHCCS--SEEEECTTC--CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCCcCHHHHHHHHhhCCC--CCEEeCCCC--CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeecc
Confidence 99999999999999999 7 999999985 69999999999999999999 999999999999999999998874
Q ss_pred CCCCChhhHHHHHHhhhc
Q 043137 382 RSGETEDTFIADLSVGLA 399 (445)
Q Consensus 382 ~~~et~~~~~~~la~a~~ 399 (445)
++.| +.+|++.++.
T Consensus 298 ~~~e----a~lhlaaa~~ 311 (389)
T 2oz8_A 298 TFLE----AGVHMAVALP 311 (389)
T ss_dssp CGGG----TTHHHHHHST
T ss_pred cHHH----HHHHHHhcCC
Confidence 3333 5678877764
No 114
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=7.9e-41 Score=334.11 Aligned_cols=275 Identities=11% Similarity=0.068 Sum_probs=205.4
Q ss_pred ceEEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHH
Q 043137 2 AITITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVS 69 (445)
Q Consensus 2 ~mkI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~ 69 (445)
.|||++|+++.+.. +.+ +..++|+|+||+|++|||++...+ .++|++++..++..
T Consensus 1 ~MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-------------~~~~~~e~~~~~~~ 67 (342)
T 2okt_A 1 SLKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQ-------------TDWYDHETIASVKH 67 (342)
T ss_dssp CBCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEECCCBS-------------STTSCSCBHHHHHH
T ss_pred CcEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCEEEEEecCCC-------------CCcCCCCCHHHHHH
Confidence 38999999987732 222 246899999999999999764321 13466777777777
Q ss_pred HHHHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcc
Q 043137 70 NVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNL 149 (445)
Q Consensus 70 ~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~ 149 (445)
.+++.+ |.|+|+||.+++.+|+.|. ... + ..+|++|||+||||+.||.+|+
T Consensus 68 ~l~~~~-~~l~G~d~~~~~~l~~~l~-~~~----------g--~~~a~said~ALwDl~gk~~g~--------------- 118 (342)
T 2okt_A 68 VIEQWF-EDNRNKSFETYEAALKLVD-SLE----------N--TPAARATIVMALYQMFHVLPSF--------------- 118 (342)
T ss_dssp HHHHHH-HHHTTCCBCSHHHHHHTTG-GGT----------T--CHHHHHHHHHHHHHTTCCCCCE---------------
T ss_pred HHHHHH-HHHcCCCcCCHHHHHHHHH-Hhh----------c--ChHHHHHHHHHHHHHhhhhhCc---------------
Confidence 787766 9999999999999998887 331 1 2579999999999999998876
Q ss_pred eeeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHH
Q 043137 150 VLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEG 229 (445)
Q Consensus 150 ~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~ 229 (445)
++|+ |.++.|. +. + .+++++ .++|+++| .|+| .+ +.++
T Consensus 119 ~v~~--~~~~~g~-------~~-e---------~~~~~~---~~G~~~~K----iKvg---------------~~-d~~~ 156 (342)
T 2okt_A 119 SVAY--GATASGL-------SN-K---------QLESLK---ATKPTRIK----LKWT---------------PQ-IMHQ 156 (342)
T ss_dssp EEEC--EEEESSC-------CH-H---------HHHHHH---HHCCSEEE----EECC---------------TT-HHHH
T ss_pred eEee--eEEEecC-------CH-H---------HHHHHH---HcCCcEEE----EEeC---------------HH-HHHH
Confidence 3555 4333111 00 1 012222 22344433 3322 23 4566
Q ss_pred HHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCH
Q 043137 230 LELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDW 309 (445)
Q Consensus 230 l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~ 309 (445)
++++|+++ +++.|++|+ |+.||.+++ ++ .+.++++++.|||||++++|+
T Consensus 157 v~avr~~~------~~~~l~vDa-----------------------N~~~~~~~A-~~-~~~l~~~~i~~iEqP~~~~d~ 205 (342)
T 2okt_A 157 IRVLRELD------FHFQLVIDA-----------------------NESLDRQDF-TQ-LQLLAREQVLYIEEPFKDISM 205 (342)
T ss_dssp HHHHTTSS------SCCEEEEEC-----------------------TTCCCGGGH-HH-HHHHGGGCEEEEECCCSSGGG
T ss_pred HHHHHHhC------CCCeEEEEC-----------------------CCCCCHHHH-HH-HHHHhhCCCcEEECCCCCccH
Confidence 65554432 589999999 367888899 87 556899999999999999999
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++++ ++++ +||++||+. .++++++++++.+++|++|+|++++||||++++++++|+++|+++++++ +.|+.++
T Consensus 206 ~~~~~--~~~~--ipIa~dEs~-~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~ 279 (342)
T 2okt_A 206 LDEVA--DGTI--PPIALDEKA-TSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG-MYEYGLS 279 (342)
T ss_dssp GGGSC--TTSS--CCEEESTTC-CCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC-SSCCHHH
T ss_pred HHHHH--hcCC--CCEEecCCC-CCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcC-CcccHHH
Confidence 99988 5566 999999985 6799999999999999999999999999999999999999999998876 4688776
Q ss_pred HHHHHHhh
Q 043137 390 FIADLSVG 397 (445)
Q Consensus 390 ~~~~la~a 397 (445)
..+.++++
T Consensus 280 ~aa~~hla 287 (342)
T 2okt_A 280 RYFTAMLA 287 (342)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544444
No 115
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.3e-39 Score=320.09 Aligned_cols=282 Identities=16% Similarity=0.176 Sum_probs=200.7
Q ss_pred EEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHH
Q 043137 4 TITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNV 71 (445)
Q Consensus 4 kI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i 71 (445)
||++|+++.+.. +.+ +..++|+|+ |+|++|||++...+. | +++.......+
T Consensus 3 ~i~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~~---------------~-g~~~~~~~~~i 65 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELE-EEGIKGTGECTPYPR---------------Y-GESDASVMAQI 65 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CCSEEEEEEEEEE-ETTEEEEEEECCCGG---------------G-TCCHHHHHHHH
T ss_pred ceEEEEEEEEEecccccEEecCeeEEEeeEEEEEEE-eCCceEEEEeeCCCC---------------c-CCCHHHHHHHH
Confidence 466777766632 222 245899998 789999996543211 1 33344445555
Q ss_pred HHhHhhhhc-CCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcce
Q 043137 72 NAIIGPALA-GKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV 150 (445)
Q Consensus 72 ~~~l~p~Li-G~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~ 150 (445)
+ .+.|.|+ |+| ++.+++ +.. ..+|++|||+||||+.||..|+|||+||| |..+ +
T Consensus 66 ~-~~~~~l~~~~~---~~~~~~-----~~~------------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~-~ 120 (324)
T 1jpd_X 66 M-SVVPQLEKGLT---REELQK-----ILP------------AGAARNALDCALWDLAARRQQQSLADLIG---ITLP-E 120 (324)
T ss_dssp H-TTHHHHHTTCC---HHHHHH-----HSC------------SSHHHHHHHHHHHHHHHHTTTCCHHHHHT---CCCC-S
T ss_pred H-HHHHHHhcCCC---HHHHHH-----hCc------------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCC-C
Confidence 5 4778874 654 455432 211 14799999999999999999999999999 8653 3
Q ss_pred eeeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHH
Q 043137 151 LPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGL 230 (445)
Q Consensus 151 vp~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l 230 (445)
.|++.|++ +++ +. +..++++.+...++|+++| .|+|. +.+.+++
T Consensus 121 ~~~~~~~~-~~~-------~~---------e~~~~~a~~~~~~G~~~~K----iKvg~---------------~~d~~~v 164 (324)
T 1jpd_X 121 TVITAQTV-VIG-------TP---------DQMANSASTLWQAGAKLLK----VKLDN---------------HLISERM 164 (324)
T ss_dssp EEEBCEEE-CSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS---------------SCHHHHH
T ss_pred CcceeEEe-eCC-------CH---------HHHHHHHHHHHHcCCCEEE----EEeCC---------------chHHHHH
Confidence 56666664 222 11 2234455555555665554 34331 2345666
Q ss_pred HHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHH
Q 043137 231 ELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWE 310 (445)
Q Consensus 231 ~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~ 310 (445)
+++|+++ +++.|++|+| +.||.++++++ .+.+++|++.|||||++++|++
T Consensus 165 ~avr~~~------~~~~l~vDaN-----------------------~~~~~~~a~~~-~~~l~~~~i~~iEqP~~~~d~~ 214 (324)
T 1jpd_X 165 VAIRTAV------PDATLIVDAN-----------------------ESWRAEGLAAR-CQLLADLGVAMLEQPLPAQDDA 214 (324)
T ss_dssp HHHHHHC------TTSEEEEECT-----------------------TCCCSTTHHHH-HHHHHHTTCCEEECCSCTTSCG
T ss_pred HHHHHhC------CCCEEEEECc-----------------------CCCCHHHHHHH-HHHHHhCCCCEEECCCCCCCHH
Confidence 6555543 5899999993 56788899987 4578999999999999999999
Q ss_pred HHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhH
Q 043137 311 HYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTF 390 (445)
Q Consensus 311 ~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~ 390 (445)
++++++ ++ +||++||+. +++++++++++. +|++|||++++||+|++++++++|+++|++++++| +.|+..+.
T Consensus 215 ~~~~l~--~~--ipIa~dE~~-~~~~~~~~~~~~--~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~ 286 (324)
T 1jpd_X 215 ALENFI--HP--LPICADESC-HTRSNLKALKGR--YEMVNIKLDKTGGLTEALALATEARAQGFSLMLGC-MLCTSRAI 286 (324)
T ss_dssp GGGSSC--CS--SCEEESTTC-SSGGGHHHHBTT--BSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHH
T ss_pred HHHhcc--CC--CCEEEcCCC-CCHHHHHHHHhh--CCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeC-cchHHHHH
Confidence 999885 45 999999985 678999999854 89999999999999999999999999999998877 56888776
Q ss_pred HHHHHhhhcCC
Q 043137 391 IADLSVGLATG 401 (445)
Q Consensus 391 ~~~la~a~~~~ 401 (445)
.+.++++....
T Consensus 287 aa~~~la~~~~ 297 (324)
T 1jpd_X 287 SAALPLVPQVS 297 (324)
T ss_dssp HHHGGGGGGCS
T ss_pred HHHHHHhhcCC
Confidence 66666554333
No 116
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.3e-36 Score=300.29 Aligned_cols=269 Identities=15% Similarity=0.172 Sum_probs=188.6
Q ss_pred ceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHhc
Q 043137 20 PTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLD 99 (445)
Q Consensus 20 ~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l~ 99 (445)
.+|+|+|+ |+|++|||++...+ +.+++.+++.+.++....+.+.|.+. +. +. ...
T Consensus 31 ~~v~V~i~-d~G~~G~GE~~p~~----------------~~get~e~~~~~l~~~~~~~~~~~~~---~~----~~-~~~ 85 (329)
T 4gfi_A 31 DVVTCTIR-DGSFTGIGECVPYP----------------RYGESIEGVTADIEAMADRVAAGLTR---QE----LQ-QVM 85 (329)
T ss_dssp EEEEEEEE-ETTEEEEEEECCCG----------------GGTCCHHHHHHHHHTTHHHHHHTCCH---HH----HH-HHS
T ss_pred EEEEEEEE-ECCEEEEEeccCCC----------------CCCcCHHHHHHHHHHHhhhhccccch---hh----HH-hhc
Confidence 56899994 89999999653322 22456777777777666666666543 22 22 211
Q ss_pred cCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeeccC
Q 043137 100 GTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPV 179 (445)
Q Consensus 100 ~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p~ 179 (445)
+ ..+|++|||+||||+.||..|+|+|++|| |..++.+|++. +++.+ ..
T Consensus 86 ~------------~~~a~aaid~AlwDl~gk~~g~pl~~llg---G~~~~~v~~~~--~~~~~--------~~------- 133 (329)
T 4gfi_A 86 K------------PGAARNAVDCALWDLEAKMSGKRAAEQVL---GQPAQPLVTAY--TISLA--------DP------- 133 (329)
T ss_dssp C------------SSHHHHHHHHHHHHHHHHHHSCCHHHHHH---SSCCCCEECCE--EECCC--------CH-------
T ss_pred c------------cHHHHHHHHHHHHHHHhhhcCCChhHHhC---CCCCCceeeee--cccCC--------Ch-------
Confidence 1 13699999999999999999999999999 98877777643 32211 00
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEecccccccc
Q 043137 180 GASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYG 259 (445)
Q Consensus 180 ~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~ 259 (445)
+....++.+ ..|....|++. | ...+.+.++.+| ++| +++.|++|+
T Consensus 134 -~~~~~~~~~---------------~~~~~~~Kik~-g-----~~~d~~~v~~vr----~~g--~d~~l~vDa------- 178 (329)
T 4gfi_A 134 -DTMAAKTAE---------------NAGRPLLKIKT-G-----TADDEARLRAVR----AAA--PEARIIIDA------- 178 (329)
T ss_dssp -HHHHHHHHH---------------TTTSSEEEEEC-C-----SSCCHHHHHHHH----HHC--TTSEEEEEC-------
T ss_pred -HHHHHHHHh---------------hccccEEEecC-C-----cccHHHHHHHHH----Hhc--cCCeEEEEc-------
Confidence 111111111 11211122211 0 123466665554 446 689999999
Q ss_pred CCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHH
Q 043137 260 SDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVE 339 (445)
Q Consensus 260 ~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~ 339 (445)
|+.||.++++++ .+.++++++.|||||++++|.+++.+ .+.+ +||++||+. .+++++.
T Consensus 179 ----------------N~~w~~~~A~~~-~~~l~~~~i~~iEqP~~~~~~~~~~~--~~~~--ipia~dEs~-~~~~d~~ 236 (329)
T 4gfi_A 179 ----------------NEGWNDDNIEYY-LKLAAELKISLIEQPLPAGKDAMLAR--IEHP--VLICADESV-HSTEDLA 236 (329)
T ss_dssp ----------------TTCCCTTTHHHH-HHHHHHTTCCEEECCSCTTSCGGGGG--SCCS--SEEEESTTC-CTGGGSG
T ss_pred ----------------CCCCCHHHHHHH-HHhhhhcCceEEEecCCCccHHHHHH--hcCC--CCchhccCC-CCHHHHH
Confidence 367888899987 45689999999999999998776543 3344 999999985 5688887
Q ss_pred HHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 340 KAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 340 ~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+. .+++|++|||++++||||++++++++|+++|+++++++ +.|+.++.++.++++...+++.+
T Consensus 237 ~~--~~a~d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~dl 299 (329)
T 4gfi_A 237 GL--RDRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMVGC-MLGTSLGMAPAVLVAQGTAFADL 299 (329)
T ss_dssp GG--TTTCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHHTTTCSEECC
T ss_pred HH--hhccCeEEecCceeCCHHHHHHHHHHHHHCCCEEEECC-cchhHHHHHHHHHHHhCCCeecc
Confidence 64 57899999999999999999999999999999998876 57888877666666655666544
No 117
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=100.00 E-value=3.8e-36 Score=298.90 Aligned_cols=258 Identities=13% Similarity=0.132 Sum_probs=182.6
Q ss_pred CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHHhHhhhhcCCCCCCHHHHHHHHHHHh
Q 043137 19 NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQL 98 (445)
Q Consensus 19 ~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~~l~p~LiG~d~~~~e~i~~~l~~~l 98 (445)
+..++|+|+||+|++|||++...+ .|+++++.+++..+ +.|.|.| ||.+++.+|+.
T Consensus 28 ~~~~lV~v~td~G~~G~GE~~~~~---------------~~~~e~~~~~~~~~-~~l~~~l---~~~~~~~~~~~----- 83 (332)
T 2ozt_A 28 RSGIYLRLEDEQGQVGYGEIAPLP---------------GWGSETLNADIALC-QQLPGHL---TPEIMATIPEA----- 83 (332)
T ss_dssp EEEEEEEEECTTSCEEEEEECCCT---------------TSSSCCHHHHHHHH-HHSCSEE---CHHHHTTSCTT-----
T ss_pred eeEEEEEEEECCCCEEEEEecCCC---------------CCCcccHHHHHHHH-HHhhccC---CHHHHHHHHHH-----
Confidence 456899999999999999654211 24556676766554 3566755 44333322211
Q ss_pred ccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeeeeeEEeecCcccCCCCcccceeeecc
Q 043137 99 DGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILP 178 (445)
Q Consensus 99 ~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~~~~~~~~gg~~~~~~~~~~e~~~~p 178 (445)
+ ..+++|||+||| +.|| || |..+ + +.+.+. + +
T Consensus 84 -------------~-~~a~~aid~Al~-l~gk---------lg---g~~~-~-~~y~~~-~--~---------------- 115 (332)
T 2ozt_A 84 -------------L-PAAQFGFATAWQ-SVGR---------LP---YRVR-P-WPICAL-L--G---------------- 115 (332)
T ss_dssp -------------C-HHHHHHHHHHHH-HTTT---------CS---CCCC-C-CCBCEE-E--C----------------
T ss_pred -------------h-HHHHHHHHHHHH-Hhcc---------cC---CCCC-C-cceEEe-c--C----------------
Confidence 1 358899999999 8777 56 6544 3 443221 1 1
Q ss_pred CChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHHHHHHHHhCCCCCeEEEEeccccccc
Q 043137 179 VGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFY 258 (445)
Q Consensus 179 ~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~ 258 (445)
.++...+++.+...++|+.+| .|+|. .+.+.+.++++++|+++ | +++.|++|+
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avr~~~---g--~~~~L~vDa------ 168 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFK----WKVGV------------MSPEEEQAILKALLAAL---P--PGAKLRLDA------ 168 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEE----EECSS------------SCHHHHHHHHHHHHHHS---C--TTCEEEEEC------
T ss_pred ChHHHHHHHHHHHHcCCcEEE----EEeCC------------CChHHHHHHHHHHHHHc---C--CCCEEEEcc------
Confidence 112223444444444555443 34331 11233345555554443 5 579999999
Q ss_pred cCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC---CeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCH
Q 043137 259 GSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY---PIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNP 335 (445)
Q Consensus 259 ~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~---~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~ 335 (445)
|+.||.+++++++ +.+++| ++.|||||++++|+++|++|+++++ +||++||+. .++
T Consensus 169 -----------------N~~~~~~~A~~~~-~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~--ipIa~dEs~-~~~ 227 (332)
T 2ozt_A 169 -----------------NGSWDRATANRWF-AWLDRHGNGKIEYVEQPLPPDQWQALLSLAQTVT--TAIALDESV-VSA 227 (332)
T ss_dssp -----------------TTCCCHHHHHHHH-HHHHHHCCTTEEEEECCSCTTCHHHHHHHHHHCS--SCEEESTTC-CSH
T ss_pred -----------------cCCCCHHHHHHHH-HHHHhhccCCcceeECCCCCCCHHHHHHHHHhCC--CCEEeCCCC-CCH
Confidence 3678999999985 557889 9999999999999999999999998 999999985 679
Q ss_pred HHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHc--CCcEEecCCCCCChhh--HHHHHHhhhcC
Q 043137 336 KRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQA--GWGVMASHRSGETEDT--FIADLSVGLAT 400 (445)
Q Consensus 336 ~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~--g~~~~~~~~~~et~~~--~~~~la~a~~~ 400 (445)
++++++++.+++|+++||++++||++ +++++|+++ |++++++|+ .||.++ +.+||+.++..
T Consensus 228 ~~~~~~~~~~a~~~i~ik~~~~GGi~---~i~~~A~~~~~gi~~~~~~~-~es~i~~aa~~hlaa~~~~ 292 (332)
T 2ozt_A 228 AEVQRWVDRGWPGFFVIKTALFGDPD---SLSLLLRRGLEPQRLVFSSA-LEGAIARTAIFHLLETWQP 292 (332)
T ss_dssp HHHHHHHHTTCCSEEEECHHHHSCHH---HHHHHHHTTCCGGGEEEBCC-SCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCEEEEChhhhCCHH---HHHHHHHHhCCCCcEEEeCC-cchHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998 778899999 999999885 588765 46677777653
No 118
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=100.00 E-value=8.5e-36 Score=295.22 Aligned_cols=266 Identities=17% Similarity=0.172 Sum_probs=192.3
Q ss_pred EEEEEEEEEEec--------CCC----CceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHH
Q 043137 4 TITAVKARQIFD--------SRG----NPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNV 71 (445)
Q Consensus 4 kI~~v~~~~v~~--------~~g----~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i 71 (445)
||++|+.+.+.. +.+ +..++|+|+|| |++|||++... +.|++++...+...+
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~G~GE~~~~---------------~~~~~e~~~~~~~~l 65 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISPL---------------PGFSQETWEEAQSVL 65 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEEEEEEECCC---------------TTTCSSCHHHHHHHH
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeEEEEEecCC---------------CCCCccCHHHHHHHH
Confidence 688888887742 222 34689999997 99999965431 125566677777778
Q ss_pred HHhHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCccee
Q 043137 72 NAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVL 151 (445)
Q Consensus 72 ~~~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~v 151 (445)
++.+.|.|+|+ .+ +++ ..+|++|||+||||+.||..|+|+|+ .+
T Consensus 66 ~~~~~~~l~g~--~~-----------l~~------------~~~a~~aid~ALwDl~gk~~g~p~~~-----------~v 109 (322)
T 1r6w_A 66 LAWVNNWLAGD--CE-----------LPQ------------MPSVAFGVSCALAELTDTLPQAANYR-----------AA 109 (322)
T ss_dssp HHHHHHHTTSC--CC-----------CCS------------SHHHHHHHHHHHHHHTTCSCCCSCCC-----------CC
T ss_pred HHHHHHhhCCh--hh-----------ccc------------ChHHHHHHHHHHHHhcCCCCCCCccc-----------eE
Confidence 88899999998 21 111 14699999999999999999988762 24
Q ss_pred eeeeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHH
Q 043137 152 PVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLE 231 (445)
Q Consensus 152 p~~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~ 231 (445)
|++. + +. ++.++++.+. ++|+++| .|+|. .+.+.+.++++
T Consensus 110 ~~~~------~-------~~---------~~~~~~a~~~--~G~~~~K----iKvG~------------~~~~~d~~~v~ 149 (322)
T 1r6w_A 110 PLCN------G-------DP---------DDLILKLADM--PGEKVAK----VRVGL------------YEAVRDGMVVN 149 (322)
T ss_dssp CEEC------S-------CH---------HHHHHHHHTC--CSSEEEE----EECSS------------SCHHHHHHHHH
T ss_pred EEeC------C-------CH---------HHHHHHHHHh--CCCceEE----EEeCC------------CCHHHHHHHHH
Confidence 4421 1 01 1112222221 2444433 34331 12233455555
Q ss_pred HHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccC---CeeeEECCCCcCC
Q 043137 232 LLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDY---PIVSIEDPFDQDD 308 (445)
Q Consensus 232 ~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~---~i~~iEdP~~~~D 308 (445)
++|+++ +++.|++|+ |+.||.++++++ .+.++++ ++.|||||++ +
T Consensus 150 avr~~~------~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~i~~iEqP~~--~ 197 (322)
T 1r6w_A 150 LLLEAI------PDLHLRLDA-----------------------NRAWTPLKGQQF-AKYVNPDYRDRIAFLEEPCK--T 197 (322)
T ss_dssp HHHHHC------TTEEEEEEC-----------------------TTCBCHHHHHHH-HHTSCTTTGGGEEEEECCBS--S
T ss_pred HHHHhC------CCCeEEEeC-----------------------CCCCCHHHHHHH-HHHhhhhccCCeeEEECCCC--C
Confidence 554432 589999999 367899999988 5678998 9999999997 4
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
++++++|+++++ +||++||+..+ . ++ ++++.+++|++|||++++||+|++++++++|+++|++++++|+ .|+..
T Consensus 198 ~~~~~~l~~~~~--ipIa~dE~~~~-~-~~-~~~~~~a~d~i~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~i 271 (322)
T 1r6w_A 198 RDDSRAFARETG--IAIAWDESLRE-P-DF-AFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSS-IESSL 271 (322)
T ss_dssp HHHHHHHHHHHC--CCEEESGGGGS-T-TC-CCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEBCS-SCCHH
T ss_pred hHHHHHHHHhCC--CCEEeCCCCCC-h-hH-hhhhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCcEEEECc-cccHH
Confidence 889999999998 99999998654 4 46 6778999999999999999999999999999999999988775 58875
Q ss_pred h--HHHHHHhhhc
Q 043137 389 T--FIADLSVGLA 399 (445)
Q Consensus 389 ~--~~~~la~a~~ 399 (445)
+ +.+||+.++.
T Consensus 272 g~aa~~hlaa~~~ 284 (322)
T 1r6w_A 272 GLTQLARIAAWLT 284 (322)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 4 5667776654
No 119
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=100.00 E-value=4.9e-33 Score=276.39 Aligned_cols=252 Identities=15% Similarity=0.116 Sum_probs=173.9
Q ss_pred eEEEEEEEEEEe------cC---CCCceEEEEEEeCCCceEEEeccCCCccccccceeeccCCCCCCCccHHHHHHHHHH
Q 043137 3 ITITAVKARQIF------DS---RGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNA 73 (445)
Q Consensus 3 mkI~~v~~~~v~------~~---~g~~~v~V~v~td~G~~G~g~~~~~~~~g~~e~~~~~~~~~~y~~~~~~~a~~~i~~ 73 (445)
|||+ +....+- .+ ..+..++|+|+||+|++|||++...+ .|++++... .+.+
T Consensus 2 MkI~-~~~~~~pl~~p~~~s~~~~~~~~~~V~v~td~G~~G~GE~~~~~---------------~~~~e~~~~---~l~~ 62 (330)
T 3caw_A 2 IKIS-YSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWP---------------ELGDLSLEE---QLSD 62 (330)
T ss_dssp -CEE-EEEEEECBC----------CEEEEEEEEECTTSCEEEEEECCCG---------------GGTCCCHHH---HHHH
T ss_pred cEEE-EEEEEeecCCCeEeeeEEEEeeEEEEEEEECCCCEEEEeecCCC---------------CcCcccHHH---HHHH
Confidence 7888 5444432 12 11356899999999999999654311 134444433 2333
Q ss_pred hHhhhhcCCCCCCHHHHHHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhccccCCCcceeee
Q 043137 74 IIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPV 153 (445)
Q Consensus 74 ~l~p~LiG~d~~~~e~i~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG~~~G~~~~~vp~ 153 (445)
.+ |. . ...+|++|||+||||+.||.+|+|||+ | | +++|+
T Consensus 63 ~l------------------l~-~--------------~~~~a~said~AlwDl~gk~~g~Pl~~--G---g---~~v~~ 101 (330)
T 3caw_A 63 LR------------------MG-R--------------MTTQIEQSIWLARRDALLRKEKKHVFD--G---G---EKIKN 101 (330)
T ss_dssp HH------------------HT-C--------------CCHHHHHHHHHHHHHHHHHHTTCBTTT--T---S---CCCCB
T ss_pred HH------------------hc-c--------------chHHHHHHHHHHHHHHHHHHcCCcccc--C---C---CceEE
Confidence 22 11 0 124799999999999999999999999 9 7 45776
Q ss_pred eeEEeecCcccCCCCcccceeeeccCChhcHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCCCCCCCccChHHHHHHH
Q 043137 154 PAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233 (445)
Q Consensus 154 ~~~~~~~gg~~~~~~~~~~e~~~~p~~~~~~~~a~~~~~~~~~~~k~~lk~k~G~~~~~~~~~g~~~~~~~~~~~~l~~l 233 (445)
+. ++++..+. +. ++.. +...++|+++| .|+|. +. .+.++.+
T Consensus 102 ~~--~~~~~~~~----~~---------~~~~----~~~~~G~~~~K----iKvg~-------------~~---~~d~~~v 142 (330)
T 3caw_A 102 NY--LLSHFQDL----KP---------GFLD----GLKNEGYNTVK----VKMGR-------------DL---QKEADML 142 (330)
T ss_dssp CE--EECTTSCC----CT---------THHH----HHHHHTCCEEE----EECSS-------------CH---HHHHHHH
T ss_pred EE--EecCCCCC----CH---------HHHH----HHHHcCCcEEE----EecCC-------------CH---HHHHHHH
Confidence 43 33200000 01 1111 22233465544 34331 22 3334444
Q ss_pred HHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhcc---CCeeeEECCCCcC-CH
Q 043137 234 NTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISD---YPIVSIEDPFDQD-DW 309 (445)
Q Consensus 234 ~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~---~~i~~iEdP~~~~-D~ 309 (445)
+++|+ +++.|++|+ |+.||.++++++ .+.+++ +++.|||||++++ |+
T Consensus 143 -~avr~----~~~~l~vDa-----------------------N~~~~~~~A~~~-~~~l~~~~~~~l~~iEqP~~~~~d~ 193 (330)
T 3caw_A 143 -THIAA----SGMRMRLDF-----------------------NALGSWQTFEKF-MVNLPLTVRPLIEYVEDPFPFDFHA 193 (330)
T ss_dssp -HHHHH----TTCEEEEEC-----------------------TTCSCHHHHHHH-HHTSCTTTGGGEEEEECCSSCCHHH
T ss_pred -HHHhC----CCCeEEEEC-----------------------CCCCCHHHHHHH-HHHhhhhccCCceEEECCCCCCccH
Confidence 34444 378999999 367899999988 456788 9999999999999 99
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+++ |+ + . +||++||+ ++++++++++.+++|++|||++++ |+| +++++|+++|+++++++ +.|+.++
T Consensus 194 ~~~--l~-~--~-iPIa~dEs---~~~~~~~~i~~~a~d~v~~k~~~~-Gi~---~i~~~A~~~gi~~~~~~-~~es~ig 259 (330)
T 3caw_A 194 WGE--AR-K--L-AKIALDNQ---YDKVPWGKIASAPFDVIVIKPAKT-DVD---KAVAQCQKWNLKLAVTS-YMDHPVG 259 (330)
T ss_dssp HHH--HT-T--T-SCEEESTT---GGGCCTTTCSSCSCSEEEECTTTS-CHH---HHHHHHHHTTCEEEEBC-CSCCHHH
T ss_pred HHH--HH-h--c-CcEEeCCC---CHHHHHHHHHcCCCCEEEechhhc-cHH---HHHHHHHHcCCcEEEeC-ccCcHHH
Confidence 999 77 4 3 99999997 489999999999999999999999 999 99999999999987765 5688765
Q ss_pred --HHHHHHh
Q 043137 390 --FIADLSV 396 (445)
Q Consensus 390 --~~~~la~ 396 (445)
+.+||+.
T Consensus 260 ~aa~~hlaa 268 (330)
T 3caw_A 260 VVHAVGVAM 268 (330)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 4566666
No 120
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=99.93 E-value=6.5e-26 Score=224.40 Aligned_cols=138 Identities=18% Similarity=0.312 Sum_probs=105.7
Q ss_pred cChHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC
Q 043137 224 QENKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP 303 (445)
Q Consensus 224 ~~~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP 303 (445)
+.+.++++++|+++ | +++.|++|+ |+.||.+++++++ +.++++++.|||||
T Consensus 108 ~~d~~~v~avR~~~---G--~~~~L~vDa-----------------------N~~w~~~~A~~~~-~~L~~~~l~~iEqP 158 (327)
T 2opj_A 108 ANDVARVEAVRDAL---G--PRGRVRIDV-----------------------NGAWDVDTAVRMI-RLLDRFELEYVEQP 158 (327)
T ss_dssp -CHHHHHHHHHHHH---C--TTSEEEEEC-----------------------TTCSCHHHHHHHH-HHHGGGCEEEEECC
T ss_pred HHHHHHHHHHHHHh---C--CCCEEEEEC-----------------------CCCCCHHHHHHHH-HHHHhcCCcEEeCC
Confidence 44567777777665 5 589999999 3678999999884 56889999999999
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
++ +++++++|+++++ +||++||+. .++++++++++.+++|++|||++++||||+++++++ .+|+++++++ +
T Consensus 159 ~~--~~~~~~~l~~~~~--iPIa~dEs~-~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ia~---~~gi~~~~~~-~ 229 (327)
T 2opj_A 159 CA--TVDELAEVRRRVS--VPIAADESI-RRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAE---ECGLPVVVSS-A 229 (327)
T ss_dssp SS--SHHHHHHHHHHCS--SCEEC------------CTTTTTCCSBEEECHHHHTSHHHHHHHHH---HTCSCEEEBC-C
T ss_pred CC--CHHHHHHHHhhCC--CCEEcCCCC-CCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH---HcCCcEEEcC-C
Confidence 97 5899999999998 999999985 568999999999999999999999999999998864 4699998877 4
Q ss_pred CCChhhH--HHHHHhhhc
Q 043137 384 GETEDTF--IADLSVGLA 399 (445)
Q Consensus 384 ~et~~~~--~~~la~a~~ 399 (445)
.|+.++. ++||+.++.
T Consensus 230 ~es~ig~aa~~hlaaa~~ 247 (327)
T 2opj_A 230 VETSVGLAAGVALAAALP 247 (327)
T ss_dssp SCCHHHHHHHHHHHHHSS
T ss_pred CcCHHHHHHHHHHHHhCC
Confidence 6887765 456665543
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.86 E-value=0.0065 Score=59.92 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=58.0
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCC------------CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhc
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPF------------DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKE 344 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~------------~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~ 344 (445)
.+++.++.+++ .+.+++.++.||+-.. +..+++..+++++.++ +||++... +++++++.++++.
T Consensus 234 ~g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~t~e~a~~~l~~ 309 (349)
T 3hgj_A 234 GGWSLEDTLAF-ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG--LRTGAVGL-ITTPEQAETLLQA 309 (349)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC--CEEEECSS-CCCHHHHHHHHHT
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC--ceEEEECC-CCCHHHHHHHHHC
Confidence 46788888876 5678889999988542 2246778899999998 99977776 4679999999999
Q ss_pred CCCCEEEec
Q 043137 345 KTCNALLLK 353 (445)
Q Consensus 345 ~a~d~v~ik 353 (445)
+.+|.|.+-
T Consensus 310 G~aD~V~iG 318 (349)
T 3hgj_A 310 GSADLVLLG 318 (349)
T ss_dssp TSCSEEEES
T ss_pred CCceEEEec
Confidence 999999863
No 122
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.08 E-value=0.046 Score=53.49 Aligned_cols=73 Identities=5% Similarity=0.098 Sum_probs=57.8
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEE--------C--CCCc-CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcC
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIE--------D--PFDQ-DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEK 345 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iE--------d--P~~~-~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~ 345 (445)
.+++.++++++ .+.+++.++.||+ + |..+ .+++..+++++.++ +||++... +++++++.++++.+
T Consensus 224 ~g~~~~~~~~~-a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~s~~~a~~~l~~G 299 (338)
T 1z41_A 224 KGLDIADHIGF-AKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD--MATGAVGM-ITDGSMAEEILQNG 299 (338)
T ss_dssp TSCCHHHHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC--CEEEECSS-CCSHHHHHHHHHTT
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC--CCEEEECC-CCCHHHHHHHHHcC
Confidence 46788888876 5678889988887 2 3333 36788899999998 99977765 46799999999999
Q ss_pred CCCEEEec
Q 043137 346 TCNALLLK 353 (445)
Q Consensus 346 a~d~v~ik 353 (445)
.+|.|.+-
T Consensus 300 ~aD~V~iG 307 (338)
T 1z41_A 300 RADLIFIG 307 (338)
T ss_dssp SCSEEEEC
T ss_pred CceEEeec
Confidence 99999864
No 123
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.00 E-value=0.13 Score=50.49 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=54.8
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECC----------CC-cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDP----------FD-QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP----------~~-~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a 346 (445)
+++.++.+++ .+.+++. +.||+-. .. ..+++..+++++.++ +||++... +++++++.++++.+.
T Consensus 226 g~~~~~~~~~-a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-i~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 226 GINIDMMVEY-INMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN--IKTSAVGL-ITTQELAEEILSNER 300 (343)
T ss_dssp SCCHHHHHHH-HHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT--CEEEEESS-CCCHHHHHHHHHTTS
T ss_pred CccHHHHHHH-HHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC--cccceeee-eeHHHHHHHHHhchh
Confidence 5778888876 5678888 8888762 12 236777789999998 99976665 467999999999999
Q ss_pred CCEEEe
Q 043137 347 CNALLL 352 (445)
Q Consensus 347 ~d~v~i 352 (445)
+|.|.+
T Consensus 301 aD~V~i 306 (343)
T 3kru_A 301 ADLVAL 306 (343)
T ss_dssp CSEEEE
T ss_pred hHHHHH
Confidence 999885
No 124
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=95.37 E-value=0.05 Score=54.10 Aligned_cols=70 Identities=10% Similarity=-0.011 Sum_probs=54.6
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCCc-----CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFDQ-----DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~~-----~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++.++++++ .+.++++++.||+.+... ...+ .+++++.++ +||++.... +++++.++++.+.+|+|.+
T Consensus 262 ~~~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~--iPvi~~G~i--t~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 262 SNPEALTKHL-CKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYS--GVKISNLRY--DFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp SCHHHHHHHH-HHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCC--SCEEEESSC--CHHHHHHHHHTTSCSEEEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCC--CcEEEECCC--CHHHHHHHHHcCCCeEEEe
Confidence 4667788776 567889999999876521 1125 788998887 999777764 5999999999999999986
Q ss_pred c
Q 043137 353 K 353 (445)
Q Consensus 353 k 353 (445)
-
T Consensus 336 g 336 (379)
T 3aty_A 336 G 336 (379)
T ss_dssp S
T ss_pred c
Confidence 4
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.36 E-value=0.06 Score=53.24 Aligned_cols=70 Identities=7% Similarity=-0.014 Sum_probs=54.7
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECC-----------C-CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCC
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDP-----------F-DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP-----------~-~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a 346 (445)
++.++.+++ .+.+++.++.||+-. . +..+++..+++++.++ +||++... +++++++.++++.+.
T Consensus 243 ~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~--iPVi~~Gg-I~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIEL-ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK--LPVTSAWG-FGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHH-HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT--CCEEECSS-TTSHHHHHHHHHTTS
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC--CcEEEeCC-CCCHHHHHHHHHCCC
Confidence 677888876 567888898888732 1 1236777889999998 99977765 467999999999999
Q ss_pred CCEEEe
Q 043137 347 CNALLL 352 (445)
Q Consensus 347 ~d~v~i 352 (445)
+|.|.+
T Consensus 319 aD~V~i 324 (363)
T 3l5l_A 319 LDLVSV 324 (363)
T ss_dssp CSEEEC
T ss_pred ccEEEe
Confidence 999875
No 126
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=95.16 E-value=0.041 Score=54.72 Aligned_cols=71 Identities=6% Similarity=-0.039 Sum_probs=52.7
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC------c--CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD------Q--DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNA 349 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~------~--~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~ 349 (445)
.++.++++++ .+.++++++.||+-+.+ + .+++..+++++.++ +||++.... +++++.++++.+.+|+
T Consensus 252 ~~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~--iPvi~~G~i--~~~~a~~~l~~g~aD~ 326 (376)
T 1icp_A 252 TNPTALGLYM-VESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK--GTFIVAGGY--DREDGNRALIEDRADL 326 (376)
T ss_dssp SCHHHHHHHH-HHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC--SCEEEESSC--CHHHHHHHHHTTSCSE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC--CCEEEeCCC--CHHHHHHHHHCCCCcE
Confidence 3455677766 66789999999987532 1 23344578899988 898766654 5999999999999999
Q ss_pred EEec
Q 043137 350 LLLK 353 (445)
Q Consensus 350 v~ik 353 (445)
|.+-
T Consensus 327 V~~g 330 (376)
T 1icp_A 327 VAYG 330 (376)
T ss_dssp EEES
T ss_pred Eeec
Confidence 9864
No 127
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.14 E-value=0.15 Score=49.63 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCc-CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQ-DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~-~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+.+..++.+.+ +++.+-..+--.++. ++.+.+..++++++ +||++|-.+ ++.-+...++.+ +|.+.|++..+|
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRvavp~~~~a~al~~I~~~~~--vPlvaDiHf--~~~lal~a~e~G-~dklRINPGNig 117 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRVAVPHKEDVEALEEIVKKSP--MPVIADIHF--APSYAFLSMEKG-VHGIRINPGNIG 117 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEEECCSHHHHHHHHHHHHHCS--SCEEEECCS--CHHHHHHHHHTT-CSEEEECHHHHS
T ss_pred CHHHHHHHHHH-HHHcCCCEEEeCCCChHHHHHHHHHHhcCC--CCEEEeCCC--CHHHHHHHHHhC-CCeEEECCcccC
Confidence 34445544443 455665666556654 56788999999988 999999643 466666666543 788999999999
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCC
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~ 382 (445)
.-....+++..|+++|+++-+|-+
T Consensus 118 ~~~~~~~vv~~ak~~~~piRIGvN 141 (366)
T 3noy_A 118 KEEIVREIVEEAKRRGVAVRIGVN 141 (366)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred chhHHHHHHHHHHHcCCCEEEecC
Confidence 999999999999999999988743
No 128
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.04 E-value=0.1 Score=51.59 Aligned_cols=71 Identities=11% Similarity=0.024 Sum_probs=55.5
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC------cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD------QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALL 351 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~------~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ 351 (445)
.++.++++++ .+.++++++.||+-+.. ..+++..+++++.++ +||++.... +++++.++++.+.+|+|.
T Consensus 247 ~~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~--iPvi~~Ggi--t~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 247 PNEEADALYL-IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH--GVIIGAGAY--TAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp TTHHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC--SEEEEESSC--CHHHHHHHHHTTSCSEEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC--CCEEEECCc--CHHHHHHHHHCCCccEEE
Confidence 3466677766 66788899999987642 345677788999998 999776664 599999999999999998
Q ss_pred ec
Q 043137 352 LK 353 (445)
Q Consensus 352 ik 353 (445)
+=
T Consensus 322 ~g 323 (364)
T 1vyr_A 322 FG 323 (364)
T ss_dssp ES
T ss_pred EC
Confidence 64
No 129
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.89 E-value=0.073 Score=56.94 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=54.8
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEE-------CCCC--------cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHH
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIE-------DPFD--------QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKA 341 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iE-------dP~~--------~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~ 341 (445)
.+++.++++++ .+.++++++.||+ .+++ ...++..+++++.++ +||++... +++++++.++
T Consensus 223 ~g~~~~~~~~~-a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--iPvi~~Gg-i~~~~~a~~~ 298 (671)
T 1ps9_A 223 DGGTFAETVEL-AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS--LPLVTTNR-INDPQVADDI 298 (671)
T ss_dssp TCCCHHHHHHH-HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS--SCEEECSS-CCSHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC--ceEEEeCC-CCCHHHHHHH
Confidence 35788888876 5668888988885 3333 133566778888887 99977776 4579999999
Q ss_pred HhcCCCCEEEe
Q 043137 342 IKEKTCNALLL 352 (445)
Q Consensus 342 i~~~a~d~v~i 352 (445)
++.+.+|.|.+
T Consensus 299 l~~g~aD~V~~ 309 (671)
T 1ps9_A 299 LSRGDADMVSM 309 (671)
T ss_dssp HHTTSCSEEEE
T ss_pred HHcCCCCEEEe
Confidence 99999999984
No 130
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.41 E-value=0.45 Score=46.88 Aligned_cols=71 Identities=10% Similarity=0.013 Sum_probs=53.4
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC------cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD------QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALL 351 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~------~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ 351 (445)
.++.++++++ .+.+++.++.||+-.-. ...++..+++++.++ +||++.... +++++.++++.+.+|.|.
T Consensus 246 ~~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~--iPvi~~Ggi--~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 246 ADPILTYTAA-AALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQ--GVLIYAGRY--NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp SSHHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC--SEEEEESSC--CHHHHHHHHHTTSCSEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCC--CcEEEeCCC--CHHHHHHHHHCCCcceeh
Confidence 4566777766 56788899888875432 124566788999998 998666554 599999999999999998
Q ss_pred ec
Q 043137 352 LK 353 (445)
Q Consensus 352 ik 353 (445)
+=
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 64
No 131
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=93.36 E-value=0.33 Score=48.08 Aligned_cols=71 Identities=6% Similarity=-0.061 Sum_probs=52.9
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC------c-CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD------Q-DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~------~-~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v 350 (445)
+++.++++++ .+.++++++.||+-.-. + .+++..+++++.++ +||++.... + ++++.++++.+.+|+|
T Consensus 251 ~~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~--iPvi~~Ggi-~-~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 251 DEPEAMAFYL-AGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK--GGLIYCGNY-D-AGRAQARLDDNTADAV 325 (377)
T ss_dssp SCHHHHHHHH-HHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC--SEEEEESSC-C-HHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC--CCEEEECCC-C-HHHHHHHHHCCCceEE
Confidence 4567777776 66788899888874321 1 24556788999988 998666553 4 9999999999999999
Q ss_pred Eec
Q 043137 351 LLK 353 (445)
Q Consensus 351 ~ik 353 (445)
.+=
T Consensus 326 ~ig 328 (377)
T 2r14_A 326 AFG 328 (377)
T ss_dssp EES
T ss_pred eec
Confidence 863
No 132
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=93.06 E-value=0.3 Score=48.15 Aligned_cols=68 Identities=7% Similarity=0.021 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+.++.+++ .+.+++.++.||+-.-.....+..+++++.++ +||++... + +++++.++++.+.+|.|.+
T Consensus 248 ~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~--iPvi~~Gg-i-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 248 PAATFGHV-ARELGRRRIAFLFARESFGGDAIGQQLKAAFG--GPFIVNEN-F-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHH-HHHHHHTTCSEEEEECCCSTTCCHHHHHHHHC--SCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred cHHHHHHH-HHHHHHcCCCEEEECCCCCCHHHHHHHHHHcC--CCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 34566655 66788899999885543222234678888888 88855554 3 5999999999999999886
No 133
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=93.01 E-value=0.3 Score=48.15 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 281 GDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 281 ~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
.++.+++ .+.+++.++.||+-.-.....+..+++++.++ +||++... + +++++.++++.+.+|.|.+
T Consensus 241 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~--iPvi~~Gg-i-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 241 AETFTYV-ARELGKRGIAFICSREREADDSIGPLIKEAFG--GPYIVNER-F-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCCTTCCHHHHHHHHC--SCEEEESS-C-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHH-HHHHHHhCCCEEEECCCCCCHHHHHHHHHHCC--CCEEEeCC-C-CHHHHHHHHHcCCccEEEE
Confidence 4556665 66788899999875443221134678888888 88855544 3 5999999999999999985
No 134
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.28 E-value=0.68 Score=45.15 Aligned_cols=72 Identities=7% Similarity=0.063 Sum_probs=53.1
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEEC--------C--CC-cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIED--------P--FD-QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKT 346 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEd--------P--~~-~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a 346 (445)
+++.++.+++ .+.+++.++.||+= + .. ..+++-.+++++.++ +||++.-. +++++++.++++.+.
T Consensus 225 g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~--iPVi~~Gg-I~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 225 GLTAKDYVPY-AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD--IPTGAVGL-ITSGWQAEEILQNGR 300 (340)
T ss_dssp SCCGGGHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT--CCEEEESS-CCCHHHHHHHHHTTS
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC--CcEEeeCC-CCCHHHHHHHHHCCC
Confidence 5677787776 56678888777752 1 11 235677788999987 99855544 467999999999999
Q ss_pred CCEEEec
Q 043137 347 CNALLLK 353 (445)
Q Consensus 347 ~d~v~ik 353 (445)
+|.|.+-
T Consensus 301 aD~V~iG 307 (340)
T 3gr7_A 301 ADLVFLG 307 (340)
T ss_dssp CSEEEEC
T ss_pred eeEEEec
Confidence 9998863
No 135
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=90.30 E-value=0.82 Score=45.67 Aligned_cols=71 Identities=3% Similarity=-0.083 Sum_probs=49.6
Q ss_pred ccCHHHHHHHHHHhhccCC------eeeEEC--------CCCc--------CCHHHHHHHHHHhCCCceEEeCcccccCH
Q 043137 278 KISGDALKDLYKSFISDYP------IVSIED--------PFDQ--------DDWEHYAKLTSEVGEKVQIVGDDLLVTNP 335 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~------i~~iEd--------P~~~--------~D~~~~~~L~~~~~~~vpI~gde~~~~~~ 335 (445)
.++.++++++ .+.+++.+ +.||+- +..+ .+++..+++++.++ +||++.... ++
T Consensus 256 ~~~~~~~~~l-a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~--iPvi~~G~i--~~ 330 (402)
T 2hsa_B 256 SNPLSLGLAV-VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ--GTFICSGGY--TR 330 (402)
T ss_dssp SCHHHHHHHH-HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS--SCEEEESSC--CH
T ss_pred CCCHHHHHHH-HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC--CCEEEeCCC--CH
Confidence 3456677765 56677777 777653 1111 13445577888887 898665553 59
Q ss_pred HHHHHHHhcCCCCEEEec
Q 043137 336 KRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 336 ~~~~~~i~~~a~d~v~ik 353 (445)
+++.++++.+.+|+|.+=
T Consensus 331 ~~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 331 ELGIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHCCCCceeeec
Confidence 999999999999999864
No 136
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=88.79 E-value=0.71 Score=41.93 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcC-CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQD-DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+++++++. .+.+-+-++.+||=|+... -++..++|+++++ -+++|-.. +.+.++++..++.++-=++.|..
T Consensus 23 ~~~~a~~~-a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p--~~~IGAGT-Vlt~~~a~~ai~AGA~fivsP~~---- 94 (217)
T 3lab_A 23 DLVHAIPM-AKALVAGGVHLLEVTLRTEAGLAAISAIKKAVP--EAIVGAGT-VCTADDFQKAIDAGAQFIVSPGL---- 94 (217)
T ss_dssp CGGGHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT--TSEEEEEC-CCSHHHHHHHHHHTCSEEEESSC----
T ss_pred CHHHHHHH-HHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCC--CCeEeecc-ccCHHHHHHHHHcCCCEEEeCCC----
Confidence 55678776 5566678999999998754 4578889999987 34444433 45799999999998766665543
Q ss_pred cHHHHHHHHHHHHHcCC------cEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 359 SVTESIEAVRMSKQAGW------GVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~------~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
..++++.|+++|+ .++.|.+. -++ +.-|...++.++|+
T Consensus 95 ----~~evi~~~~~~~v~~~~~~~~~PG~~T-ptE----~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 95 ----TPELIEKAKQVKLDGQWQGVFLPGVAT-ASE----VMIAAQAGITQLKC 138 (217)
T ss_dssp ----CHHHHHHHHHHHHHCSCCCEEEEEECS-HHH----HHHHHHTTCCEEEE
T ss_pred ----cHHHHHHHHHcCCCccCCCeEeCCCCC-HHH----HHHHHHcCCCEEEE
Confidence 2367788888999 88776632 111 22234456666664
No 137
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=87.03 E-value=3.8 Score=41.03 Aligned_cols=72 Identities=8% Similarity=0.156 Sum_probs=48.3
Q ss_pred ccCHHHHHHHHHHhhcc-CCeeeEE------------CCC-Cc-CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHH
Q 043137 278 KISGDALKDLYKSFISD-YPIVSIE------------DPF-DQ-DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAI 342 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~-~~i~~iE------------dP~-~~-~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i 342 (445)
+++.++.+++ .+.+++ .++.||+ .|. .+ .+.+-.+.+++.++.++||++--. +++++++.+++
T Consensus 260 G~~~ed~~~l-a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~Gg-I~t~e~Ae~~L 337 (419)
T 3l5a_A 260 GYTIDEFNQL-IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGG-INSPESALDAL 337 (419)
T ss_dssp EECHHHHHHH-HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSS-CCSHHHHHHHG
T ss_pred CCCHHHHHHH-HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECC-CCCHHHHHHHH
Confidence 5777888876 556777 7777664 111 11 133456788888844488855443 35799999999
Q ss_pred hcCCCCEEEec
Q 043137 343 KEKTCNALLLK 353 (445)
Q Consensus 343 ~~~a~d~v~ik 353 (445)
+. +|.|.+=
T Consensus 338 ~~--aDlVaiG 346 (419)
T 3l5a_A 338 QH--ADMVGMS 346 (419)
T ss_dssp GG--CSEEEES
T ss_pred Hh--CCcHHHH
Confidence 88 8988753
No 138
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.45 E-value=3.9 Score=38.71 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=78.1
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCC--C-------cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPF--D-------QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~--~-------~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.+++ .+.+++.++..||.-. . .++++-.+.+++.. +++++.= ..+..++++.++.+ ++
T Consensus 22 ~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~--~~~v~~l---~~n~~~i~~a~~~G-~~ 94 (295)
T 1ydn_A 22 FVPTADKIAL-INRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRAD--GVRYSVL---VPNMKGYEAAAAAH-AD 94 (295)
T ss_dssp CCCHHHHHHH-HHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCS--SSEEEEE---CSSHHHHHHHHHTT-CS
T ss_pred CcCHHHHHHH-HHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCC--CCEEEEE---eCCHHHHHHHHHCC-CC
Confidence 3678888887 5667889998998733 1 14555666665442 3777432 14688999988875 57
Q ss_pred EEEecc--C--------C---cccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhhHH---HHHHhhhcCCcccc
Q 043137 349 ALLLKV--N--------Q---IGSVTESIEAVRMSKQAGWGVM--ASHRS-----GETEDTFI---ADLSVGLATGQIKT 405 (445)
Q Consensus 349 ~v~ik~--~--------~---~GGit~a~~ia~~A~~~g~~~~--~~~~~-----~et~~~~~---~~la~a~~~~~~~~ 405 (445)
.|.+.. + + -.-+..+++++++|+++|+.+. +++.. ..+..... +..+...++..+.+
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 174 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSL 174 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 788774 2 2 2255666777999999999986 44421 12333333 44445677777765
Q ss_pred CC
Q 043137 406 GA 407 (445)
Q Consensus 406 G~ 407 (445)
.+
T Consensus 175 ~D 176 (295)
T 1ydn_A 175 GD 176 (295)
T ss_dssp EE
T ss_pred cC
Confidence 44
No 139
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=83.91 E-value=4.5 Score=38.95 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||++.-- +.+.+++.++++.+ +|.|++--.
T Consensus 276 ~~~i~~i~~~~~~~ipVi~~GG-I~~~~da~~~l~~G-Ad~V~igr~ 320 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPIIGVGG-IDSVIAAREKIAAG-ASLVQIYSG 320 (336)
T ss_dssp HHHHHHHHHHHTTSSCEEEESS-CCSHHHHHHHHHHT-CSEEEESHH
T ss_pred HHHHHHHHHHhCCCCCEEEECC-CCCHHHHHHHHHCC-CCEEEeeHH
Confidence 3556788888843499866554 56799999999988 899987544
No 140
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=83.89 E-value=4 Score=43.84 Aligned_cols=42 Identities=7% Similarity=0.086 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++..+++++.++ +||++-.. +++++++.++++.+.+|+|.+
T Consensus 279 ~~~~~~~i~~~~~--~pvi~~G~-i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 279 TIPWVKLVKQVSK--KPVLGVGR-YTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp THHHHHHHHTTCS--SCEECCSC-CCCHHHHHHHHHTTSCSBEEE
T ss_pred cHHHHHHHHHHCC--CEEEEeCC-CCCHHHHHHHHHCCCCCEEEe
Confidence 4566677888887 99977665 467999999999999999984
No 141
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=82.63 E-value=2.7 Score=38.53 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCc-CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQ-DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~-~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+++++++. .+.+-+.++.+||=++.. +..+..++++++++. +-|-++ . +.+.++++..++.++-=++.+.
T Consensus 44 ~~~~a~~~-a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~-~~iGaG-T-Vlt~~~a~~Ai~AGA~fIvsP~----- 114 (232)
T 4e38_A 44 NAEDIIPL-GKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPE-MLIGAG-T-ILNGEQALAAKEAGATFVVSPG----- 114 (232)
T ss_dssp SGGGHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTT-CEEEEE-C-CCSHHHHHHHHHHTCSEEECSS-----
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCC-CEEeEC-C-cCCHHHHHHHHHcCCCEEEeCC-----
Confidence 44677776 445566899999988864 345777889988862 444333 3 3468999999988874443332
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+ ..++++.|+.+|++++.|.+ |... +.-|...++.++|+
T Consensus 115 -~--~~~vi~~~~~~gi~~ipGv~---TptE--i~~A~~~Gad~vK~ 153 (232)
T 4e38_A 115 -F--NPNTVRACQEIGIDIVPGVN---NPST--VEAALEMGLTTLKF 153 (232)
T ss_dssp -C--CHHHHHHHHHHTCEEECEEC---SHHH--HHHHHHTTCCEEEE
T ss_pred -C--CHHHHHHHHHcCCCEEcCCC---CHHH--HHHHHHcCCCEEEE
Confidence 2 24677789999999877764 2111 22234556777775
No 142
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=80.41 E-value=8.8 Score=39.45 Aligned_cols=94 Identities=12% Similarity=0.176 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC-------C------cccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-------Q------IGSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-------~------~GGit~a~~ia~~A~~~g~ 375 (445)
++..+++++..+ .++|+++.. .+.+.++.+++.+ +|+|.+-+. | ..-+|...++++.|+.+|+
T Consensus 310 ~~~i~~ik~~~p-~~~viaGNV--aT~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~v 385 (556)
T 4af0_A 310 IEFIKWIKQTYP-KIDVIAGNV--VTREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGI 385 (556)
T ss_dssp HHHHHHHHHHCT-TSEEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHhhCC-cceEEeccc--cCHHHHHHHHHcC-CCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCC
Confidence 456677887775 489988864 3589999999887 688775543 1 2458999999999999999
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCCCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++.....--+++ +-.|+|+++.++.+|++.
T Consensus 386 pvIADGGI~~sGD---i~KAlaaGAd~VMlGsll 416 (556)
T 4af0_A 386 PCIADGGIGNIGH---IAKALALGASAVMMGGLL 416 (556)
T ss_dssp CEEEESCCCSHHH---HHHHHHTTCSEEEESTTT
T ss_pred CEEecCCcCcchH---HHHHhhcCCCEEEEchhh
Confidence 9866553222222 233566678999998854
No 143
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.61 E-value=13 Score=32.65 Aligned_cols=91 Identities=18% Similarity=0.081 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCC-HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDD-WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D-~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+.+++.++ .+.+.+.++.+||=.+...+ .+..+++++.++...+|..+. +.++++++..++.+ +|++ +.....
T Consensus 20 ~~~~~~~~-~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~~G-ad~i-v~~~~~- 93 (205)
T 1wa3_A 20 SVEEAKEK-ALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVESG-AEFI-VSPHLD- 93 (205)
T ss_dssp SHHHHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHHHT-CSEE-ECSSCC-
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHHcC-CCEE-EcCCCC-
Confidence 55677765 56677788888874333323 345788888764336765443 35688888877754 7888 444321
Q ss_pred cHHHHHHHHHHHHHcCCcEEecC
Q 043137 359 SVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~ 381 (445)
.++++.|+++|++++.+.
T Consensus 94 -----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 94 -----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp -----HHHHHHHHHHTCEEECEE
T ss_pred -----HHHHHHHHHcCCcEECCc
Confidence 356677888899886644
No 144
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=77.54 E-value=8.9 Score=40.74 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=46.7
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEE-------C----C-CCc--CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHH
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIE-------D----P-FDQ--DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAI 342 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iE-------d----P-~~~--~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i 342 (445)
.+++.++.+++ .+.+++ .+.++. + | +.+ ...+..+++++.++ +||++--. ++++++..+++
T Consensus 239 ~g~~~~~~~~~-~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pvi~~G~-i~~~~~a~~~l 313 (690)
T 3k30_A 239 GGITREDIEGV-LRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTT--KPVVGVGR-FTSPDAMVRQI 313 (690)
T ss_dssp TSCCHHHHHHH-HHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCS--SCEEECSC-CCCHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcC--CeEEEeCC-CCCHHHHHHHH
Confidence 36777888776 556776 333332 1 1 111 12445566777777 89866554 46799999999
Q ss_pred hcCCCCEEEe
Q 043137 343 KEKTCNALLL 352 (445)
Q Consensus 343 ~~~a~d~v~i 352 (445)
+.+.+|.|.+
T Consensus 314 ~~g~~d~v~~ 323 (690)
T 3k30_A 314 KAGILDLIGA 323 (690)
T ss_dssp HTTSCSEEEE
T ss_pred HCCCcceEEE
Confidence 9999999983
No 145
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=76.35 E-value=8.6 Score=36.98 Aligned_cols=129 Identities=12% Similarity=0.158 Sum_probs=81.3
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC---cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhc---CCCCEEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD---QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKE---KTCNALL 351 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~---~a~d~v~ 351 (445)
.++.++-+++ .+.|++.++.+||=-+| ++|++..+++++..+ ++.+++= ...+..++++.++. -.++.|.
T Consensus 24 ~~~~~~Kl~i-a~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l--~r~~~~~i~~a~~al~~ag~~~v~ 99 (325)
T 3eeg_A 24 QLNTEEKIIV-AKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVT-RPTICAL--TRAKEADINIAGEALRFAKRSRIH 99 (325)
T ss_dssp -CCTTHHHHH-HHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCC-SSEEEEE--CCSCHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCC-CCEEEEe--ecCCHHHHHHHHHhhcccCCCEEE
Confidence 4677888887 56678899999987443 557777888887754 3555432 12357777766554 2345544
Q ss_pred e-------------ccCCcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhHHH---HHHhhhcCCccccCCCCC
Q 043137 352 L-------------KVNQIGSVTESIEAVRMSKQAGWGVMASHRS-GETEDTFIA---DLSVGLATGQIKTGAPCR 410 (445)
Q Consensus 352 i-------------k~~~~GGit~a~~ia~~A~~~g~~~~~~~~~-~et~~~~~~---~la~a~~~~~~~~G~~~~ 410 (445)
+ +.++--.+..+.+++++|+++|+.+.+++.. +.+.....+ ..+...++..+.+.+-.+
T Consensus 100 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G 175 (325)
T 3eeg_A 100 TGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTG 175 (325)
T ss_dssp EEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSS
T ss_pred EEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccC
Confidence 3 3334456677788999999999998887632 223334433 334455777777666443
No 146
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=75.24 E-value=12 Score=34.49 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=73.7
Q ss_pred ccCHHHHHHHHHHhhccCCeeeE-ECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSI-EDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 356 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~i-EdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~ 356 (445)
..++.++.+.|.+. ...|..+ |+++-...++.++.+++.++ +||.--+.. .+..++.. ...-.+|++.+....
T Consensus 60 ~~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v~--lPvLrKDfi-~~~~qi~e-a~~~GAD~ilLi~a~ 133 (251)
T 1i4n_A 60 DASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLTC--RPILAKDFY-IDTVQVKL-ASSVGADAILIIARI 133 (251)
T ss_dssp TCCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTCC--SCEEEECCC-CSTHHHHH-HHHTTCSEEEEEGGG
T ss_pred CCCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhCC--CCEEEeeCC-CCHHHHHH-HHHcCCCEEEEeccc
Confidence 34677776666654 5667765 66666778899999999988 999777764 55677766 556678999999886
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecC
Q 043137 357 IGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 357 ~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.. -....+..+.|++.|+.+++-.
T Consensus 134 l~-~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 134 LT-AEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp SC-HHHHHHHHHHHHTTTCEEEEEE
T ss_pred CC-HHHHHHHHHHHHHcCCeEEEEe
Confidence 43 3678889999999999998865
No 147
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=73.59 E-value=32 Score=30.12 Aligned_cols=119 Identities=9% Similarity=0.041 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCC---cCCHHHHHHHHHHh-CCCceEEeCcccccCHHH-HHHHHhcCCCCEEEecc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFD---QDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKR-VEKAIKEKTCNALLLKV 354 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~---~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~-~~~~i~~~a~d~v~ik~ 354 (445)
+.+++++.+.. +.+ ++.+||.-+| ..-++..+++++.. + +||..+-.+...... ++.+.+.+ +|.+.+..
T Consensus 11 ~~~~~~~~~~~-~~~-~~diie~G~p~~~~~g~~~i~~ir~~~~~--~~i~~~~~~~~~~~~~~~~~~~~G-ad~v~v~~ 85 (211)
T 3f4w_A 11 TLPEAMVFMDK-VVD-DVDIIEVGTPFLIREGVNAIKAIKEKYPH--KEVLADAKIMDGGHFESQLLFDAG-ADYVTVLG 85 (211)
T ss_dssp CHHHHHHHHHH-HGG-GCSEEEECHHHHHHHTTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTT-CSEEEEET
T ss_pred CHHHHHHHHHH-hhc-CccEEEeCcHHHHhccHHHHHHHHHhCCC--CEEEEEEEeccchHHHHHHHHhcC-CCEEEEeC
Confidence 45677777554 443 5888898542 34567788888873 5 888666433223444 45555554 57777743
Q ss_pred CCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCccccC
Q 043137 355 NQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 355 ~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G 406 (445)
.- +.....++.+.++++|+++++.-...++... .+..+...++.++.+.
T Consensus 86 ~~--~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~-~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 86 VT--DVLTIQSCIRAAKEAGKQVVVDMICVDDLPA-RVRLLEEAGADMLAVH 134 (211)
T ss_dssp TS--CHHHHHHHHHHHHHHTCEEEEECTTCSSHHH-HHHHHHHHTCCEEEEE
T ss_pred CC--ChhHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHHcCCCEEEEc
Confidence 32 3355678888999999998764212333222 2344445567777653
No 148
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=70.89 E-value=16 Score=35.99 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=61.2
Q ss_pred CCeeeEECCCCcCCHHHHHHHHHHh---CCCceEEeCcccccCHHHHHHHHh--cCCCCEEEeccCCccc----HHHHHH
Q 043137 295 YPIVSIEDPFDQDDWEHYAKLTSEV---GEKVQIVGDDLLVTNPKRVEKAIK--EKTCNALLLKVNQIGS----VTESIE 365 (445)
Q Consensus 295 ~~i~~iEdP~~~~D~~~~~~L~~~~---~~~vpI~gde~~~~~~~~~~~~i~--~~a~d~v~ik~~~~GG----it~a~~ 365 (445)
..+.=+-=| ..++-+.+.++++++ +.++|+++|=.+ +..-+.+.++ ..++|-+.|.++.+|. -....+
T Consensus 52 ~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiHF--~~~~al~a~~~~a~~~dkiRINPGNig~~~k~~e~~~~ 128 (406)
T 4g9p_A 52 SEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFHF--NGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAE 128 (406)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECCS--SHHHHHHHCHHHHHHCSEEEECTTSSCSTHHHHHHHHH
T ss_pred CCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeecc--cHHHHHHHHHHHHhHHhhcccCccccCccccHHHHHHH
Confidence 346666655 456778888888872 123999999653 3444333221 3468999999999984 355788
Q ss_pred HHHHHHHcCCcEEecCCCC
Q 043137 366 AVRMSKQAGWGVMASHRSG 384 (445)
Q Consensus 366 ia~~A~~~g~~~~~~~~~~ 384 (445)
+++.|+.+|+++-+|-+.|
T Consensus 129 vv~~ak~~~~pIRIGVN~G 147 (406)
T 4g9p_A 129 MIRIAMDLGKPVRIGANWG 147 (406)
T ss_dssp HHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHccCCceeccccc
Confidence 9999999999998887654
No 149
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=69.89 E-value=20 Score=36.06 Aligned_cols=97 Identities=12% Similarity=0.246 Sum_probs=73.1
Q ss_pred ccCHHHHHHHHHHhhccCCeeeE-ECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSI-EDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 356 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~i-EdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~ 356 (445)
..++.++.+.|.+- .-.|.-+ |+++-...++.++.+++.++ +||.--+. ...+.++.. ...-.+|+|.+..+.
T Consensus 67 ~~~~~~iA~~y~~~--A~~IsvLTd~~~F~gs~~dL~~vr~~v~--lPvLrKDF-I~d~~Qi~e-a~~~GAD~ILLi~a~ 140 (452)
T 1pii_A 67 DFDPARIAAIYKHY--ASAISVLTDEKYFQGSFNFLPIVSQIAP--QPILCKDF-IIDPYQIYL-ARYYQADACLLMLSV 140 (452)
T ss_dssp SCCHHHHHHHHTTT--CSEEEEECCSTTTCCCTTHHHHHHHHCC--SCEEEESC-CCSHHHHHH-HHHTTCSEEEEETTT
T ss_pred CCCHHHHHHHHHhh--CcEEEEEecccccCCCHHHHHHHHHhcC--CCeEEEec-cCCHHHHHH-HHHcCCCEEEEEccc
Confidence 34666665555432 2345544 66677778899999999998 99977775 566777777 556678999999987
Q ss_pred cccHHHHHHHHHHHHHcCCcEEecC
Q 043137 357 IGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 357 ~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.. -.+..+..+.|++.|+.+++-.
T Consensus 141 l~-~~~l~~l~~~a~~lgm~~LvEv 164 (452)
T 1pii_A 141 LD-DDQYRQLAAVAHSLEMGVLTEV 164 (452)
T ss_dssp CC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CC-HHHHHHHHHHHHHcCCeEEEEe
Confidence 65 3778999999999999998865
No 150
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=69.61 E-value=15 Score=34.65 Aligned_cols=44 Identities=7% Similarity=-0.034 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.+ .++||++.-- +++.+++.+++..+ +|.|++=-.
T Consensus 232 ~~~i~~v~~~~-~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~ig~~ 275 (314)
T 2e6f_A 232 LANVNAFYRRC-PDKLVFGCGG-VYSGEDAFLHILAG-ASMVQVGTA 275 (314)
T ss_dssp HHHHHHHHHHC-TTSEEEEESS-CCSHHHHHHHHHHT-CSSEEECHH
T ss_pred HHHHHHHHHhc-CCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEchh
Confidence 56777888888 2399855543 56799999999887 899887543
No 151
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=67.67 E-value=40 Score=31.41 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=66.7
Q ss_pred ccCHHHHHHHHHHhhccCC---eeeE-ECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 278 KISGDALKDLYKSFISDYP---IVSI-EDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~---i~~i-EdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++.+. .++.+ |..+ |+++-...++.++.+++.++ +||.-.+. ..++.++...... .+|.|.+.
T Consensus 78 ~~dp~~~A~~----y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~--lPVl~Kdf-i~d~~qi~ea~~~-GAD~VlLi 149 (272)
T 3tsm_A 78 DFDPPALAKA----YEEGGAACLSVLTDTPSFQGAPEFLTAARQACS--LPALRKDF-LFDPYQVYEARSW-GADCILII 149 (272)
T ss_dssp SCCHHHHHHH----HHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSS--SCEEEESC-CCSTHHHHHHHHT-TCSEEEEE
T ss_pred CCCHHHHHHH----HHHCCCCEEEEeccccccCCCHHHHHHHHHhcC--CCEEECCc-cCCHHHHHHHHHc-CCCEEEEc
Confidence 4566665443 34444 4333 55666678899999999988 99855555 4557777776554 56888888
Q ss_pred cCCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 354 VNQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 354 ~~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
..-.. -.++.++...|+..|+.+++..
T Consensus 150 ~a~L~-~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 150 MASVD-DDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp TTTSC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccC-HHHHHHHHHHHHHcCCeEEEEe
Confidence 77664 4778899999999999987654
No 152
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=66.59 E-value=50 Score=31.69 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=79.6
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEEC------CC--------CcCCHHHHHHHHHHhCCCceEE--eCcccccCHHHHHH
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIED------PF--------DQDDWEHYAKLTSEVGEKVQIV--GDDLLVTNPKRVEK 340 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEd------P~--------~~~D~~~~~~L~~~~~~~vpI~--gde~~~~~~~~~~~ 340 (445)
..++.++.+++ .+.+++.++..||= |. ..++++-++++++..+ +++|+ +.-. ..+.+++++
T Consensus 25 ~~~~~e~k~~i-~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~-~~~~~~i~~ 101 (345)
T 1nvm_A 25 HQYTLDDVRAI-ARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPG-IGSVHDLKN 101 (345)
T ss_dssp TCCCHHHHHHH-HHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBT-TBCHHHHHH
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCC-CCEEEEEecCC-cccHHHHHH
Confidence 35678888887 45677889999998 32 2567777788877643 46663 2211 234677887
Q ss_pred HHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCC-CCCChhhH---HHHHHhhhcCCccccCC
Q 043137 341 AIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHR-SGETEDTF---IADLSVGLATGQIKTGA 407 (445)
Q Consensus 341 ~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~-~~et~~~~---~~~la~a~~~~~~~~G~ 407 (445)
..+. .+|.+.+-..- --+.++.+.++.|+++|+.+...-+ ...+.... .+..+...++..+.+.+
T Consensus 102 a~~a-Gvd~v~I~~~~-s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 102 AYQA-GARVVRVATHC-TEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HHHH-TCCEEEEEEET-TCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhC-CcCEEEEEEec-cHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 7776 46777765422 1234778889999999999866542 23334443 34445555666666444
No 153
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=64.98 E-value=54 Score=31.42 Aligned_cols=124 Identities=11% Similarity=0.099 Sum_probs=78.5
Q ss_pred ccCHHHHHHHHHH-hhccCCeeeEEC--CCC-cCCHHHHHHHHHH------hCCCceEEeCcccccCHHHHHHHHhcCCC
Q 043137 278 KISGDALKDLYKS-FISDYPIVSIED--PFD-QDDWEHYAKLTSE------VGEKVQIVGDDLLVTNPKRVEKAIKEKTC 347 (445)
Q Consensus 278 ~~t~~~ai~~~~~-~l~~~~i~~iEd--P~~-~~D~~~~~~L~~~------~~~~vpI~gde~~~~~~~~~~~~i~~~a~ 347 (445)
.++.++.+++ .+ .+++.++.+||= |.. ++|++..+++++. .+ ++.+++-- .+..+++..++.+ +
T Consensus 37 ~~~~~~k~~i-~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~~l~---~~~~~i~~a~~~g-~ 110 (337)
T 3ble_A 37 SFSTSEKLNI-AKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTE-RIEILGFV---DGNKTVDWIKDSG-A 110 (337)
T ss_dssp CCCHHHHHHH-HHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGG-GEEEEEES---STTHHHHHHHHHT-C
T ss_pred CcCHHHHHHH-HHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCC-CCeEEEEc---cchhhHHHHHHCC-C
Confidence 4678888887 55 678899999997 653 6777888888873 33 35665442 2234788877765 4
Q ss_pred CEEEeccCCc-------------ccHHHHHHHHHHHHHcCCcEEecCCC---C-CChhhHHH---HHHhhhcCCccccCC
Q 043137 348 NALLLKVNQI-------------GSVTESIEAVRMSKQAGWGVMASHRS---G-ETEDTFIA---DLSVGLATGQIKTGA 407 (445)
Q Consensus 348 d~v~ik~~~~-------------GGit~a~~ia~~A~~~g~~~~~~~~~---~-et~~~~~~---~la~a~~~~~~~~G~ 407 (445)
|.|.+=..-. .-+..+.++++.|+++|+.+.+.... . .+.....+ ..+...++..+.+.+
T Consensus 111 ~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~D 190 (337)
T 3ble_A 111 KVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPD 190 (337)
T ss_dssp CEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 7776543211 13457778889999999998766532 0 11223333 334455777776544
No 154
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=61.45 E-value=70 Score=30.72 Aligned_cols=67 Identities=7% Similarity=0.100 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhccCCeeeEE-CC--------------CCcCCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHHhc
Q 043137 281 GDALKDLYKSFISDYPIVSIE-DP--------------FDQDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAIKE 344 (445)
Q Consensus 281 ~~~ai~~~~~~l~~~~i~~iE-dP--------------~~~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i~~ 344 (445)
.++..++ .+.+++.++.+|. .+ .++-+++..+++++.+ + +||++.-- +.+++++.++++
T Consensus 143 ~~~~~~~-a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~--iPVianGg-I~s~eda~~~l~- 217 (350)
T 3b0p_A 143 YRGLAQS-VEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQ--LTFVTNGG-IRSLEEALFHLK- 217 (350)
T ss_dssp HHHHHHH-HHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTT--SEEEEESS-CCSHHHHHHHHT-
T ss_pred HHHHHHH-HHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCC--CeEEEECC-cCCHHHHHHHHh-
Confidence 3455555 4556667655432 11 2234788889999988 6 99855443 467999999997
Q ss_pred CCCCEEEec
Q 043137 345 KTCNALLLK 353 (445)
Q Consensus 345 ~a~d~v~ik 353 (445)
+ +|.|++=
T Consensus 218 G-aD~V~iG 225 (350)
T 3b0p_A 218 R-VDGVMLG 225 (350)
T ss_dssp T-SSEEEEC
T ss_pred C-CCEEEEC
Confidence 5 9999863
No 155
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=60.95 E-value=41 Score=31.84 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=72.1
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCC--Cc------CCHHH-HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCC
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPF--DQ------DDWEH-YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTC 347 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~--~~------~D~~~-~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~ 347 (445)
..++.++.+++ .+.|++.++.+||--. .+ .|.+. ++.+++. .++.+.+= +.+..++++.++.+ +
T Consensus 23 ~~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~l---~~~~~~i~~a~~~g-~ 95 (307)
T 1ydo_A 23 VWIATEDKITW-INQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE--KGVTYAAL---VPNQRGLENALEGG-I 95 (307)
T ss_dssp SCCCHHHHHHH-HHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC--TTCEEEEE---CCSHHHHHHHHHHT-C
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc--CCCeEEEE---eCCHHhHHHHHhCC-c
Confidence 35678888887 5667889999999732 11 23332 2222222 13555431 23578898888875 5
Q ss_pred CEEEeccCCc-------------ccHHHHHHHHHHHHHcCCcEE------ecCC-CCCChhhHHHHH---HhhhcCCccc
Q 043137 348 NALLLKVNQI-------------GSVTESIEAVRMSKQAGWGVM------ASHR-SGETEDTFIADL---SVGLATGQIK 404 (445)
Q Consensus 348 d~v~ik~~~~-------------GGit~a~~ia~~A~~~g~~~~------~~~~-~~et~~~~~~~l---a~a~~~~~~~ 404 (445)
|.|.+-.+-. .-+..+.+++++|+++|+.+. +++- .+.+.....+.+ +...++..+.
T Consensus 96 ~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 96 NEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp SEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred CEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 7777643221 124556888999999999874 2221 012334444444 3555777776
Q ss_pred cCC
Q 043137 405 TGA 407 (445)
Q Consensus 405 ~G~ 407 (445)
+.+
T Consensus 176 l~D 178 (307)
T 1ydo_A 176 LGD 178 (307)
T ss_dssp EEC
T ss_pred EcC
Confidence 554
No 156
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=60.29 E-value=14 Score=33.65 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=33.5
Q ss_pred cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 306 QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 306 ~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..+++..+++++.++ +||...-- +.+++++.++++.+ +|.|.+-
T Consensus 65 ~~~~~~i~~i~~~~~--ipvi~~Gg-i~~~~~~~~~l~~G-ad~V~ig 108 (247)
T 3tdn_A 65 GYDTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLRG-ADKVSIN 108 (247)
T ss_dssp CCCHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHTT-CSEECCS
T ss_pred cccHHHHHHHHHhCC--CCEEEeCC-CCCHHHHHHHHHcC-CCeeehh
Confidence 347888899998887 89855443 46799999999877 7887653
No 157
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=58.57 E-value=41 Score=31.60 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=73.1
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCC--Cc------CCHHH-HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCC
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPF--DQ------DDWEH-YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTC 347 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~--~~------~D~~~-~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~ 347 (445)
..++.++.+++ .+.+++.++.+||.-. .+ .|.+. ++.+++.. ++++++= +.+.+++++.++.+ +
T Consensus 25 ~~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l---~~~~~~i~~a~~aG-~ 97 (302)
T 2ftp_A 25 QPIEVADKIRL-VDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRP--GVTYAAL---APNLKGFEAALESG-V 97 (302)
T ss_dssp SCCCHHHHHHH-HHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCT--TSEEEEE---CCSHHHHHHHHHTT-C
T ss_pred CCCCHHHHHHH-HHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcC--CCEEEEE---eCCHHHHHHHHhCC-c
Confidence 35677888876 5667889999999742 11 24332 23333222 3777542 13688999999875 5
Q ss_pred CEEEecc-C------------CcccHHHHHHHHHHHHHcCCcEE--ecCCC-----CCChhhHHHHHH---hhhcCCccc
Q 043137 348 NALLLKV-N------------QIGSVTESIEAVRMSKQAGWGVM--ASHRS-----GETEDTFIADLS---VGLATGQIK 404 (445)
Q Consensus 348 d~v~ik~-~------------~~GGit~a~~ia~~A~~~g~~~~--~~~~~-----~et~~~~~~~la---~a~~~~~~~ 404 (445)
+.|.+-. . .---+..+++++++|+++|+.+. +++.. +.+.......++ ...++..+.
T Consensus 98 ~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 177 (302)
T 2ftp_A 98 KEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVS 177 (302)
T ss_dssp CEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 7777622 1 11234557888999999999874 22211 123444445444 356777666
Q ss_pred cCC
Q 043137 405 TGA 407 (445)
Q Consensus 405 ~G~ 407 (445)
+.+
T Consensus 178 l~D 180 (302)
T 2ftp_A 178 LGD 180 (302)
T ss_dssp EEE
T ss_pred EeC
Confidence 443
No 158
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=57.38 E-value=84 Score=30.24 Aligned_cols=94 Identities=10% Similarity=0.116 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-------------cccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~-------------~GGit~a~~ia~~A~~~g~ 375 (445)
++..++|++..+ .+||+... +.++++.+.+++.+ +|+|.+-..- ...++-..++.+.++..++
T Consensus 149 ~~~i~~lr~~~~-~~~vi~g~--v~t~e~A~~a~~aG-aD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~i 224 (351)
T 2c6q_A 149 VEFVKDVRKRFP-QHTIMAGN--VVTGEMVEELILSG-ADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKG 224 (351)
T ss_dssp HHHHHHHHHHCT-TSEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcC-CCeEEEEe--CCCHHHHHHHHHhC-CCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 456788888872 28875332 35689998888776 7888663211 0123444666667777789
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCCCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++..+. .-+......- +++++..+.+|.+.
T Consensus 225 pvIa~GG-I~~g~di~kA--lalGA~~V~vG~~f 255 (351)
T 2c6q_A 225 HIISDGG-CSCPGDVAKA--FGAGADFVMLGGML 255 (351)
T ss_dssp EEEEESC-CCSHHHHHHH--HHTTCSEEEESTTT
T ss_pred cEEEeCC-CCCHHHHHHH--HHcCCCceeccHHH
Confidence 9876553 2333333333 34456777666654
No 159
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=56.26 E-value=25 Score=33.03 Aligned_cols=57 Identities=7% Similarity=0.034 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCc-ccHHHHHHHH
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQI-GSVTESIEAV 367 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~-GGit~a~~ia 367 (445)
++..+++++.++.++||++.-- +.+++++.+++..+ +|.|++--.-. ++..-..++.
T Consensus 229 ~~~i~~v~~~~~~~ipvi~~GG-I~~~~da~~~l~~G-Ad~V~vg~~~l~~~p~~~~~i~ 286 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQIIGTGG-IETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRII 286 (311)
T ss_dssp HHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEchHHHhcCcHHHHHHH
Confidence 5566777777733499855543 56799999999877 89998765444 2444343333
No 160
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=54.91 E-value=11 Score=35.98 Aligned_cols=63 Identities=14% Similarity=0.373 Sum_probs=41.0
Q ss_pred HHhhccCCeeeE-------ECCC-CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC
Q 043137 289 KSFISDYPIVSI-------EDPF-DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 356 (445)
Q Consensus 289 ~~~l~~~~i~~i-------EdP~-~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~ 356 (445)
.+.+++.++.+| ++-. .+-+++..+++++ + +||+++-- +.+++++.++++...+|.|++=-.-
T Consensus 146 a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~--ipVi~~Gg-I~s~~da~~~l~~~gad~V~iGR~~ 216 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--R--IPTFVSGD-IFTPEDAKRALEESGCDGLLVARGA 216 (318)
T ss_dssp HHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--S--SCEEEESS-CCSHHHHHHHHHHHCCSEEEESGGG
T ss_pred HHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--C--CeEEEECC-cCCHHHHHHHHHcCCCCEEEECHHH
Confidence 455677776665 2221 2235555556665 4 89866554 4679999999997789999876443
No 161
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=53.34 E-value=45 Score=31.24 Aligned_cols=124 Identities=14% Similarity=0.098 Sum_probs=71.6
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCC-------Cc-CCHHH-HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCC
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPF-------DQ-DDWEH-YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTC 347 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~-------~~-~D~~~-~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~ 347 (445)
..++.++.+++ .+.+++.++.+||=-. |. .|.+. ++.+++ .+ ++++.+- +.+..++++.++.+ +
T Consensus 22 ~~~~~e~k~~i-~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~-~~-~~~~~~l---~~~~~~i~~a~~ag-~ 94 (298)
T 2cw6_A 22 NIVSTPVKIKL-IDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK-FP-GINYPVL---TPNLKGFEAAVAAG-A 94 (298)
T ss_dssp SCCCHHHHHHH-HHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCC-CT-TCBCCEE---CCSHHHHHHHHHTT-C
T ss_pred CCCCHHHHHHH-HHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhh-CC-CCEEEEE---cCCHHhHHHHHHCC-C
Confidence 35688898887 5567889999998632 10 34432 222222 21 2444331 23578899888875 5
Q ss_pred CEEEeccCC-------------cccHHHHHHHHHHHHHcCCcEEe------cCC-CCCChhhH---HHHHHhhhcCCccc
Q 043137 348 NALLLKVNQ-------------IGSVTESIEAVRMSKQAGWGVMA------SHR-SGETEDTF---IADLSVGLATGQIK 404 (445)
Q Consensus 348 d~v~ik~~~-------------~GGit~a~~ia~~A~~~g~~~~~------~~~-~~et~~~~---~~~la~a~~~~~~~ 404 (445)
|.+.+-..- -.-+..+.+++++|+++|+.+.+ ++- .+.+.... .+..+...++..+.
T Consensus 95 ~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 174 (298)
T 2cw6_A 95 KEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEIS 174 (298)
T ss_dssp SEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 777764331 12345678889999999999742 210 01223333 34445566777766
Q ss_pred cCC
Q 043137 405 TGA 407 (445)
Q Consensus 405 ~G~ 407 (445)
+.+
T Consensus 175 l~D 177 (298)
T 2cw6_A 175 LGD 177 (298)
T ss_dssp EEE
T ss_pred ecC
Confidence 444
No 162
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=50.87 E-value=76 Score=29.25 Aligned_cols=92 Identities=18% Similarity=0.198 Sum_probs=66.5
Q ss_pred HHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHH
Q 043137 282 DALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit 361 (445)
.+-++.+.+.++++++.++=+|+.+.+.+-+.++ .+ -..|-+.+ +++..=++.+.+ .---|.+|-+..|++.
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~~kIga~~--~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ 144 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY---SD-ILQIGARN--SQNFELLKEVGK--VENPVLLKRGMGNTIQ 144 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHHTT--SSSCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh---CC-EEEECccc--ccCHHHHHHHHh--cCCcEEEecCCCCCHH
Confidence 4455666888889999999999998887666665 33 24454444 355443445433 4567889999999999
Q ss_pred HHHHHHHHHHHcCC-cEEecC
Q 043137 362 ESIEAVRMSKQAGW-GVMASH 381 (445)
Q Consensus 362 ~a~~ia~~A~~~g~-~~~~~~ 381 (445)
++..++...++.|- .+++-|
T Consensus 145 e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 145 ELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEEE
Confidence 99999999999875 566656
No 163
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=50.26 E-value=90 Score=29.18 Aligned_cols=129 Identities=10% Similarity=0.113 Sum_probs=77.8
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCCC---cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhc---CCCCEE
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPFD---QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKE---KTCNAL 350 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~---~a~d~v 350 (445)
..++.++-+++ .+.|++.++..||=-+| ++|++..+++++..+ ++.+++=- .....++.+.++. -..+.|
T Consensus 22 ~~~~~~~K~~i-~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l~--~~~~~di~~a~~~~~~ag~~~v 97 (293)
T 3ewb_X 22 VNFDVKEKIQI-ALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIK-HCSVTGLA--RCVEGDIDRAEEALKDAVSPQI 97 (293)
T ss_dssp -CCCHHHHHHH-HHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCC-SSEEEEEE--ESSHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCHHHHHHH-HHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcC-CCEEEEEe--cCCHHHHHHHHHHHhhcCCCEE
Confidence 35788898887 55688899999997654 346677777776654 35553321 1246777777663 234555
Q ss_pred Eecc-------------CCcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhHH---HHHHhhhcCCccccCCCC
Q 043137 351 LLKV-------------NQIGSVTESIEAVRMSKQAGWGVMASHRS-GETEDTFI---ADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 351 ~ik~-------------~~~GGit~a~~ia~~A~~~g~~~~~~~~~-~et~~~~~---~~la~a~~~~~~~~G~~~ 409 (445)
.+=. ++--.+..+.+++++|+++|..+.++... +.+..... +..+...++..+.+.+-.
T Consensus 98 ~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~ 173 (293)
T 3ewb_X 98 HIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTV 173 (293)
T ss_dssp EEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 4322 11223445678888999999998765521 12333333 344555577777765543
No 164
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=50.21 E-value=58 Score=31.65 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-cccHHHHHHHH
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-IGSVTESIEAV 367 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~-~GGit~a~~ia 367 (445)
++..+++++.++.++||++.-- +.+.+++.+++..+ +|.|++--.- .+|..-..++.
T Consensus 285 ~~~v~~i~~~v~~~ipvI~~GG-I~s~~da~~~l~~G-Ad~V~vgra~l~~gP~~~~~i~ 342 (367)
T 3zwt_A 285 TQTIREMYALTQGRVPIIGVGG-VSSGQDALEKIRAG-ASLVQLYTALTFWGPPVVGKVK 342 (367)
T ss_dssp HHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEEECC-CCCHHHHHHHHHcC-CCEEEECHHHHhcCcHHHHHHH
Confidence 4677888888844499866554 46799999999977 6999976543 23444344443
No 165
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=49.99 E-value=50 Score=32.16 Aligned_cols=128 Identities=12% Similarity=0.134 Sum_probs=77.8
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC---cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhc---CCCCEEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD---QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKE---KTCNALL 351 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~---~a~d~v~ 351 (445)
.++.++-+++ .+.|++.++.+||=-+| +.|++..+++++..+ ++.|++=- ..+..++.+.++. -.++.|.
T Consensus 30 ~~~~~~Kl~i-a~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~-~~~i~~l~--r~~~~di~~a~~al~~ag~~~v~ 105 (370)
T 3rmj_A 30 AMTKEEKIRV-ARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTIT-KSTVCSLS--RAIERDIRQAGEAVAPAPKKRIH 105 (370)
T ss_dssp CCCHHHHHHH-HHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCS-SSEEEEEE--ESSHHHHHHHHHHHTTSSSEEEE
T ss_pred CcCHHHHHHH-HHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCC-CCeEEEEe--cCCHHHHHHHHHHHhhCCCCEEE
Confidence 5788998887 56788899999987443 456677777665543 35553221 1257888877662 2345554
Q ss_pred eccC-------------CcccHHHHHHHHHHHHHcCCcEEecCCC-CCChhhHHH---HHHhhhcCCccccCCCC
Q 043137 352 LKVN-------------QIGSVTESIEAVRMSKQAGWGVMASHRS-GETEDTFIA---DLSVGLATGQIKTGAPC 409 (445)
Q Consensus 352 ik~~-------------~~GGit~a~~ia~~A~~~g~~~~~~~~~-~et~~~~~~---~la~a~~~~~~~~G~~~ 409 (445)
+=.+ +-.-+..+.+++++|+.+|..+.+++.. +.+.....+ ..+...++..+.+.+-.
T Consensus 106 if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~ 180 (370)
T 3rmj_A 106 TFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTV 180 (370)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCcc
Confidence 3221 1122445566788999999998777632 233344433 44555577777765533
No 166
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=49.92 E-value=43 Score=31.45 Aligned_cols=88 Identities=11% Similarity=0.104 Sum_probs=55.1
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+..++-++.+.+.++++++.++=+|+.+++.+-+.++ .+ -+.|.+-+ +++..-++.+ . +.--.|.+|-....
T Consensus 71 lg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~---vd-~lkIgA~~--~~n~~LLr~~-a-~~gkPVilK~G~~~ 142 (288)
T 3tml_A 71 LGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV---VD-VLQTPAFL--CRQTDFIHAC-A-RSGKPVNIKKGQFL 142 (288)
T ss_dssp -CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHH-H-TSSSCEEEECCTTC
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---CC-EEEECccc--ccCHHHHHHH-H-ccCCcEEEeCCCCC
Confidence 3345677778888889999999999998887766554 32 13333333 2344433332 2 33446677777666
Q ss_pred cHHHHHHHHHHHHHcC
Q 043137 359 SVTESIEAVRMSKQAG 374 (445)
Q Consensus 359 Git~a~~ia~~A~~~g 374 (445)
++.+++.++..+.+.|
T Consensus 143 t~~e~~~ave~i~~~G 158 (288)
T 3tml_A 143 APHDMKNVIDKARDAA 158 (288)
T ss_dssp CTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC
Confidence 6777777777666654
No 167
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=49.70 E-value=1.6e+02 Score=27.23 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=51.5
Q ss_pred HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHH-------HHHHHHHHHHHcCCcEEecCCCC
Q 043137 312 YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT-------ESIEAVRMSKQAGWGVMASHRSG 384 (445)
Q Consensus 312 ~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit-------~a~~ia~~A~~~g~~~~~~~~~~ 384 (445)
+.+|++ .+ +.|+-|+.- +....+..+ ..-..|.|-||-+-+-++. -...++.+|+..|+.++.-+ .
T Consensus 169 l~~Lr~-~G--~~ialDDFG-tG~ssl~~L-~~l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG--V 241 (294)
T 2r6o_A 169 LDALRA-RG--VRLALDDFG-TGYSSLSYL-SQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG--I 241 (294)
T ss_dssp HHHHHH-HT--CEEEEEEET-SSCBCHHHH-HHSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC--C
T ss_pred HHHHHH-CC--CEEEEECCC-CCchhHHHH-HhCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec--C
Confidence 344443 36 889888852 222223322 2336899999965433332 24568889999999986654 5
Q ss_pred CChhhHHHHHHhhhcCCccc---cCCCCCch
Q 043137 385 ETEDTFIADLSVGLATGQIK---TGAPCRSE 412 (445)
Q Consensus 385 et~~~~~~~la~a~~~~~~~---~G~~~~~e 412 (445)
||... .++...+++.++. ++-|...+
T Consensus 242 Et~~q--~~~l~~lG~d~~QGy~~~~P~~~~ 270 (294)
T 2r6o_A 242 ETAQQ--YAFLRDRGCEFGQGNLMSTPQAAD 270 (294)
T ss_dssp CSHHH--HHHHHHTTCCEECSTTTCCCEEHH
T ss_pred CcHHH--HHHHHHcCCCEEEcCccCCCCCHH
Confidence 66433 3333344554433 44444433
No 168
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=48.25 E-value=77 Score=30.65 Aligned_cols=45 Identities=7% Similarity=-0.054 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
-+++..+++++..+ ++||++.-- +.+.+|+.+++..+ +|.|++=-
T Consensus 263 ~a~~~i~~v~~~~~-~ipII~~GG-I~s~~da~~~l~aG-Ad~V~vgr 307 (354)
T 4ef8_A 263 TALANINAFYRRCP-GKLIFGCGG-VYTGEDAFLHVLAG-ASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEESC-CCSHHHHHHHHHHT-EEEEEECH
T ss_pred HHHHHHHHHHHhCC-CCCEEEECC-cCCHHHHHHHHHcC-CCEEEEhH
Confidence 35677788888752 499866654 46799999999876 79988753
No 169
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=47.66 E-value=1.1e+02 Score=28.48 Aligned_cols=92 Identities=15% Similarity=0.099 Sum_probs=65.6
Q ss_pred HHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHH
Q 043137 282 DALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit 361 (445)
.+-++.+.+.++++++.++=+|+.+++.+-+.++ .+ -..|.+-+ +++..=++.+.. .--.|.+|-+..+++.
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~~kIgs~~--~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ 159 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY---AD-MLQIGARN--MQNFPLLREVGR--SGKPVLLKRGFGNTVE 159 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHHHH--HTCCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh---CC-eEEECccc--ccCHHHHHHHHc--cCCeEEEcCCCCCCHH
Confidence 4556667888889999999999999887777666 33 13443443 345443444432 3467889999988999
Q ss_pred HHHHHHHHHHHcCC-cEEecC
Q 043137 362 ESIEAVRMSKQAGW-GVMASH 381 (445)
Q Consensus 362 ~a~~ia~~A~~~g~-~~~~~~ 381 (445)
++..++..+++.|- ++++-|
T Consensus 160 ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 160 ELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEe
Confidence 99999999998875 666755
No 170
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=47.59 E-value=73 Score=29.71 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCccc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 359 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GG 359 (445)
...+-++.+.+.++++++.++=+|+.+.+.+-+.++ .+ -+.|.+-+. ++.. +.+.+. +.--.|.+|-+..|+
T Consensus 70 ~l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~---~d-~~kIga~~~--~n~~-ll~~~a-~~~kPV~lk~G~~~t 141 (280)
T 2qkf_A 70 GLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV---CD-VIQLPAFLA--RQTD-LVVAMA-KTGNVVNIKKPQFLS 141 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH---CS-EEEECGGGT--TBHH-HHHHHH-HTCCEEEEECCTTSC
T ss_pred chHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh---CC-EEEECcccc--cCHH-HHHHHH-cCCCcEEEECCCCCC
Confidence 345566677787788999999999999887777665 22 144444432 4444 444443 456788888888888
Q ss_pred HHHHHHHHHHHHHcCC-cEEecCC
Q 043137 360 VTESIEAVRMSKQAGW-GVMASHR 382 (445)
Q Consensus 360 it~a~~ia~~A~~~g~-~~~~~~~ 382 (445)
+.+++.++...++.|- .+++-|+
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L~~r 165 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLILCER 165 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9999998888888774 5655553
No 171
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=47.03 E-value=54 Score=29.58 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeC--------ccccc-CHHHHHHHHhcCCCCEE
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGD--------DLLVT-NPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gd--------e~~~~-~~~~~~~~i~~~a~d~v 350 (445)
+...+.++ ++..++.+...|+= ...+..+++++.++ +||+|. +.+++ +.+++..+++. .+|+|
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~--~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~-Gad~V 105 (232)
T 3igs_A 34 KPEIVAAM-ALAAEQAGAVAVRI----EGIDNLRMTRSLVS--VPIIGIIKRDLDESPVRITPFLDDVDALAQA-GAAII 105 (232)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHHTTCC--SCEEEECBCCCSSCCCCBSCSHHHHHHHHHH-TCSEE
T ss_pred CcchHHHH-HHHHHHCCCeEEEE----CCHHHHHHHHHhcC--CCEEEEEeecCCCcceEeCccHHHHHHHHHc-CCCEE
Confidence 44555554 56677778777762 46788999999988 998751 12222 34567666655 47899
Q ss_pred EeccCCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 351 LLKVNQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 351 ~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.++...........++.+.+++.|+.+++..
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (232)
T 3igs_A 106 AVDGTARQRPVAVEALLARIHHHHLLTMADC 136 (232)
T ss_dssp EEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred EECccccCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 8887643223456667777788888877654
No 172
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=46.31 E-value=40 Score=32.64 Aligned_cols=92 Identities=11% Similarity=0.159 Sum_probs=47.0
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
++.++ .+.+.+.++++++.|+=+|++.++.+-+.++- .+ -+.|...|. ++..=++.+.+ .---|.++.+-.
T Consensus 88 l~~e~-~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~--v~-~~KI~S~~~--~n~~LL~~va~--~gkPviLstGma- 158 (349)
T 2wqp_A 88 LNEED-EIKLKEYVESKGMIFISTLFSRAAALRLQRMD--IP-AYKIGSGEC--NNYPLIKLVAS--FGKPIILSTGMN- 158 (349)
T ss_dssp CCHHH-HHHHHHHHHHTTCEEEEEECSHHHHHHHHHHT--CS-CEEECGGGT--TCHHHHHHHHT--TCSCEEEECTTC-
T ss_pred CCHHH-HHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcC--CC-EEEECcccc--cCHHHHHHHHh--cCCeEEEECCCC-
Confidence 44444 44567888899999999999877666554431 11 122322222 33332233322 122344444443
Q ss_pred cHHHHHHHHHHHHHcCCcEEe
Q 043137 359 SVTESIEAVRMSKQAGWGVMA 379 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~ 379 (445)
++.|+..++.+.++.|.++++
T Consensus 159 t~~Ei~~Ave~i~~~G~~iiL 179 (349)
T 2wqp_A 159 SIESIKKSVEIIREAGVPYAL 179 (349)
T ss_dssp CHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEE
Confidence 555555555555554444433
No 173
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=46.19 E-value=1.4e+02 Score=30.20 Aligned_cols=106 Identities=8% Similarity=0.110 Sum_probs=62.6
Q ss_pred CCeeeEE----CCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc---CC----------c
Q 043137 295 YPIVSIE----DPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV---NQ----------I 357 (445)
Q Consensus 295 ~~i~~iE----dP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~---~~----------~ 357 (445)
.++..|+ .+......+..++++++.+ .+||++.. +.+.+.++.+++.+ +|+|.+-. +. .
T Consensus 240 aG~d~I~id~a~g~~~~~~~~v~~i~~~~p-~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~vg~g~Gs~~~t~~~~g~g~ 315 (490)
T 4avf_A 240 AGVDVVVVDTAHGHSKGVIERVRWVKQTFP-DVQVIGGN--IATAEAAKALAEAG-ADAVKVGIGPGSICTTRIVAGVGV 315 (490)
T ss_dssp TTCSEEEEECSCCSBHHHHHHHHHHHHHCT-TSEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHHHTCBCC
T ss_pred cccceEEecccCCcchhHHHHHHHHHHHCC-CceEEEee--eCcHHHHHHHHHcC-CCEEEECCCCCcCCCccccCCCCc
Confidence 4555554 3444444577889998884 28886653 35688888887765 78887621 11 1
Q ss_pred ccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 358 GSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 358 GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
..++...++++.++..+++++..+.. .+...... +++.++..+.+|.
T Consensus 316 p~~~~l~~v~~~~~~~~iPVIa~GGI-~~~~di~k--al~~GAd~V~vGs 362 (490)
T 4avf_A 316 PQISAIANVAAALEGTGVPLIADGGI-RFSGDLAK--AMVAGAYCVMMGS 362 (490)
T ss_dssp CHHHHHHHHHHHHTTTTCCEEEESCC-CSHHHHHH--HHHHTCSEEEECT
T ss_pred cHHHHHHHHHHHhccCCCcEEEeCCC-CCHHHHHH--HHHcCCCeeeecH
Confidence 23455567777776779998665532 22222222 2334567777665
No 174
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=43.39 E-value=1.2e+02 Score=28.84 Aligned_cols=126 Identities=18% Similarity=0.178 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEE---ecccccccc------------CCc-eeeecccCCCCCCCCccCHHHHHHHHHH
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGM---DVAASEFYG------------SDK-TYDLNFKEENNDGSQKISGDALKDLYKS 290 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~v---D~~a~~~~~------------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~ 290 (445)
.-++.++|+++.+.|+. ++.||- -. ++.||. .++ .|+.+.. +..|+++....
T Consensus 174 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~fGDrktYQmdpa----------N~~EAlrE~~~ 241 (328)
T 1w1z_A 174 DGRIGAIREALDETDHS-DVGILSYAAKY-ASSFYGPFRDALHSAPQFGDKSTYQMNPA----------NTEEAMKEVEL 241 (328)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEB-CCTTCHHHHHHTTCCCCCSCSTTTSBCTT----------CSHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHH-hhhccchHHHHhccCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 45788999999999984 777774 22 222331 122 6776532 34566655433
Q ss_pred hh-ccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 291 FI-SDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 291 ~l-~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
-+ |-.++.++.=-++. ++-.+++++++. +|+++-..+ .-..=++...++++.|- . .-+++...-
T Consensus 242 Di~EGAD~vMVKPal~Y--LDIir~vk~~~~--~P~aaYqVS-GEYAMikaAa~~GwiD~-----~-----~~v~Esl~~ 306 (328)
T 1w1z_A 242 DIVEGADIVMVKPGLAY--LDIVWRTKERFD--VPVAIYHVS-GEYAMVKAAAAKGWIDE-----D-----RVMMESLLC 306 (328)
T ss_dssp HHHHTCSEEEEESCGGG--HHHHHHHHHHHC--SCEEEEECH-HHHHHHHHHHHTTSSCH-----H-----HHHHHHHHH
T ss_pred hHHhCCCEEEEcCCCch--HHHHHHHHHhcC--CCEEEEEcc-HHHHHHHHHHHcCCccH-----H-----HHHHHHHHH
Confidence 33 34678888855664 567899999998 999887643 22333455666777662 1 223333444
Q ss_pred HHHcCCcEEe
Q 043137 370 SKQAGWGVMA 379 (445)
Q Consensus 370 A~~~g~~~~~ 379 (445)
.+.+|-.+++
T Consensus 307 ~kRAGAd~Ii 316 (328)
T 1w1z_A 307 MKRAGADIIF 316 (328)
T ss_dssp HHHHTCSEEE
T ss_pred HHhcCCCEEe
Confidence 4556766655
No 175
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=42.97 E-value=86 Score=29.41 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccH
Q 043137 281 GDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV 360 (445)
Q Consensus 281 ~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGi 360 (445)
..+-++.+.+.++++++.++=+|+.+++.+-+..+ .+ -..| |--. +++.. +.+.+. +.--.|.+|-+..+++
T Consensus 74 l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~---vd-~~kI-gA~~-~~n~~-Ll~~~a-~~~kPV~lk~G~~~t~ 145 (292)
T 1o60_A 74 MEEGLKIFQELKDTFGVKIITDVHEIYQCQPVADV---VD-IIQL-PAFL-ARQTD-LVEAMA-KTGAVINVKKPQFLSP 145 (292)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT---CS-EEEE-CGGG-TTCHH-HHHHHH-HTTCEEEEECCTTSCG
T ss_pred HHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc---CC-EEEE-Cccc-ccCHH-HHHHHH-cCCCcEEEeCCCCCCH
Confidence 35556667787888999999999998876666542 22 1233 3332 34444 444443 4567788888888888
Q ss_pred HHHHHHHHHHHHcCC-cEEecCC
Q 043137 361 TESIEAVRMSKQAGW-GVMASHR 382 (445)
Q Consensus 361 t~a~~ia~~A~~~g~-~~~~~~~ 382 (445)
.+++.++..+++.|- .+++-|+
T Consensus 146 ~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 146 SQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEC
Confidence 888888888888764 5555553
No 176
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=42.55 E-value=88 Score=27.88 Aligned_cols=44 Identities=7% Similarity=0.058 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcC--CCCEEEec
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEK--TCNALLLK 353 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~--a~d~v~ik 353 (445)
-|++.++++++.++ +||+++-- +++++++.++++.. .+|.+.+=
T Consensus 177 ~~~~~~~~i~~~~~--ipvia~GG-I~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 177 PNLELLKNVCAATD--RPVVASGG-VSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CCHHHHHHHHHTCS--SCEEEESC-CCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred CCHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHhhccCCCceeeee
Confidence 37899999998887 89866543 56789999998873 56766654
No 177
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=42.48 E-value=1.1e+02 Score=27.91 Aligned_cols=116 Identities=9% Similarity=-0.042 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCC-------------------------HHHHHHHHHHh-CCCceEEeCccccc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDD-------------------------WEHYAKLTSEV-GEKVQIVGDDLLVT 333 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~~-~~~vpI~gde~~~~ 333 (445)
+.++.++. .+.+++.+..+||==+|..| ++..+++++.+ + +|+..- .+.+
T Consensus 29 ~~~~~~~~-~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--~Pi~~m-~y~n 104 (262)
T 2ekc_A 29 DYETSLKA-FKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD--IPFLLM-TYYN 104 (262)
T ss_dssp CHHHHHHH-HHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--SCEEEE-CCHH
T ss_pred ChHHHHHH-HHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC--CCEEEE-ecCc
Confidence 44566766 45567788777775333322 13467777776 5 787551 1211
Q ss_pred -----CHHHH-HHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 334 -----NPKRV-EKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 334 -----~~~~~-~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
..+.+ +.+.+.++--++.+|+. +.+..+....++++|+.++.-. ...+....+..++.. ...|+..
T Consensus 105 ~v~~~g~~~f~~~~~~aG~dgvii~dl~----~ee~~~~~~~~~~~gl~~i~l~-~p~t~~~rl~~ia~~-a~gfiy~ 176 (262)
T 2ekc_A 105 PIFRIGLEKFCRLSREKGIDGFIVPDLP----PEEAEELKAVMKKYVLSFVPLG-APTSTRKRIKLICEA-ADEMTYF 176 (262)
T ss_dssp HHHHHCHHHHHHHHHHTTCCEEECTTCC----HHHHHHHHHHHHHTTCEECCEE-CTTCCHHHHHHHHHH-CSSCEEE
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEECCCC----HHHHHHHHHHHHHcCCcEEEEe-CCCCCHHHHHHHHHh-CCCCEEE
Confidence 11333 34455554446666654 4788889999999998752211 122333444444433 3455544
No 178
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=41.94 E-value=1.4e+02 Score=26.43 Aligned_cols=44 Identities=11% Similarity=0.256 Sum_probs=32.5
Q ss_pred CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 305 DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 305 ~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
...+++.++++++. + +||+++-- +++++++.++++.+ +|.+.+=
T Consensus 172 ~~~~~~~i~~~~~~-~--ipvia~GG-I~s~~~~~~~~~~G-ad~v~vG 215 (234)
T 1yxy_A 172 AGPDVALIEALCKA-G--IAVIAEGK-IHSPEEAKKINDLG-VAGIVVG 215 (234)
T ss_dssp SSCCHHHHHHHHHT-T--CCEEEESC-CCSHHHHHHHHTTC-CSEEEEC
T ss_pred CCCCHHHHHHHHhC-C--CCEEEECC-CCCHHHHHHHHHCC-CCEEEEc
Confidence 34578888888887 6 88855543 56799999999886 6777653
No 179
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=41.79 E-value=1.6e+02 Score=28.37 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHH
Q 043137 282 DALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT 361 (445)
Q Consensus 282 ~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit 361 (445)
.+-++.+.+.++++++.++=+|+.+++.+-+.++ .+ -..|.+-+ +++..=++.+. +.---|.+|-+..+++.
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~---vd-~lkIgAr~--~~n~~LL~~va--~~~kPVilk~G~~~tl~ 227 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY---AD-IIQIGARN--AQNFRLLSKAG--SYNKPVLLKRGFMNTIE 227 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH---CS-EEEECGGG--TTCHHHHHHHH--TTCSCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh---CC-EEEECccc--ccCHHHHHHHH--ccCCcEEEcCCCCCCHH
Confidence 4556677888889999999999999888777666 33 13443443 34544344443 34568889999989999
Q ss_pred HHHHHHHHHHHcCC-cEEec
Q 043137 362 ESIEAVRMSKQAGW-GVMAS 380 (445)
Q Consensus 362 ~a~~ia~~A~~~g~-~~~~~ 380 (445)
++..++..+.+.|- ++++-
T Consensus 228 ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 228 EFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 99999999988874 55553
No 180
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=41.32 E-value=62 Score=29.13 Aligned_cols=94 Identities=12% Similarity=0.153 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEe---Cc-----cccc-CHHHHHHHHhcCCCCEE
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVG---DD-----LLVT-NPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~g---de-----~~~~-~~~~~~~~i~~~a~d~v 350 (445)
+...+.++ ++..++.+...|+= ...+..+++++.++ +||+| .+ .+++ +.+++..+++. .+|+|
T Consensus 34 ~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~--~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~a-Gad~I 105 (229)
T 3q58_A 34 KPEIVAAM-AQAAASAGAVAVRI----EGIENLRTVRPHLS--VPIIGIIKRDLTGSPVRITPYLQDVDALAQA-GADII 105 (229)
T ss_dssp SHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHGGGCC--SCEEEECBCCCSSCCCCBSCSHHHHHHHHHH-TCSEE
T ss_pred CcchHHHH-HHHHHHCCCcEEEE----CCHHHHHHHHHhcC--CCEEEEEeecCCCCceEeCccHHHHHHHHHc-CCCEE
Confidence 44555554 56677778777762 46788999999998 99864 21 2333 34566666554 57898
Q ss_pred EeccCCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 351 LLKVNQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 351 ~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.++...........++.+.+++.|+.+++..
T Consensus 106 ~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (229)
T 3q58_A 106 AFDASFRSRPVDIDSLLTRIRLHGLLAMADC 136 (229)
T ss_dssp EEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred EECccccCChHHHHHHHHHHHHCCCEEEEec
Confidence 8887643222455667777778888877654
No 181
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=41.14 E-value=25 Score=36.34 Aligned_cols=68 Identities=15% Similarity=0.087 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
-|++.+++|++.++ +||++.-- +.+++++.++++...++.+.+--.-.++-....++.++.+..|+.+
T Consensus 483 ~d~~li~~l~~~~~--iPVIasGG-i~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~ 550 (555)
T 1jvn_A 483 YDLELIEHVKDAVK--IPVIASSG-AGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKV 550 (555)
T ss_dssp CCHHHHHHHHHHCS--SCEEECSC-CCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCC--ccEEEECC-CCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 38999999999988 99854432 4679999999985556777665444455455666667788888874
No 182
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=40.06 E-value=84 Score=28.83 Aligned_cols=92 Identities=11% Similarity=-0.010 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCC-------------------------HHHHHHHHHH-hCCCceEEe--Ccc-
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDD-------------------------WEHYAKLTSE-VGEKVQIVG--DDL- 330 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~~vpI~g--de~- 330 (445)
+.++..+. .+.+++.+..+||==+|..| ++..+++++. ++ +||.. ...
T Consensus 29 ~~~~~~~~-~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--~Pv~lm~y~n~ 105 (268)
T 1qop_A 29 GIEQSLKI-IDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT--IPIGLLMYANL 105 (268)
T ss_dssp CHHHHHHH-HHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS--SCEEEEECHHH
T ss_pred CHHHHHHH-HHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEEcccH
Confidence 44566665 44567788777774333222 1446778877 66 78743 221
Q ss_pred -cccCHHH-HHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEE
Q 043137 331 -LVTNPKR-VEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVM 378 (445)
Q Consensus 331 -~~~~~~~-~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~ 378 (445)
+.+..++ ++.+.+.++--++.+|+.- .+..+....++++|+..+
T Consensus 106 v~~~g~~~~~~~~~~aGadgii~~d~~~----e~~~~~~~~~~~~g~~~i 151 (268)
T 1qop_A 106 VFNNGIDAFYARCEQVGVDSVLVADVPV----EESAPFRQAALRHNIAPI 151 (268)
T ss_dssp HHTTCHHHHHHHHHHHTCCEEEETTCCG----GGCHHHHHHHHHTTCEEE
T ss_pred HHHhhHHHHHHHHHHcCCCEEEEcCCCH----HHHHHHHHHHHHcCCcEE
Confidence 1112233 4445555554477777662 567778888999998753
No 183
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=39.63 E-value=1.2e+02 Score=28.44 Aligned_cols=63 Identities=10% Similarity=0.113 Sum_probs=46.5
Q ss_pred HHHhhccC--CeeeEECCCCcCCHHHHHHHHHHh--CCCceE-EeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 288 YKSFISDY--PIVSIEDPFDQDDWEHYAKLTSEV--GEKVQI-VGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 288 ~~~~l~~~--~i~~iEdP~~~~D~~~~~~L~~~~--~~~vpI-~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
|...-+++ .+.|+|---.+.+.+-.+++++.+ . +|| +|.- ++++++++++++.+ +|.|.+--.
T Consensus 191 Ya~~gad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~--iPV~vGGG--Irs~Eda~~ll~aG-AD~VVVGSA 258 (286)
T 3vk5_A 191 YLHVARAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPD--QVLFVSGN--VRSGRQVTEYLDSG-ADYVGFAGA 258 (286)
T ss_dssp HHHHHHHTTCSEEEEECSSSCCCHHHHHHHHHHSCTT--CEEEEESS--CCSHHHHHHHHHTT-CSEEEESGG
T ss_pred HHHHHHHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCC--CCEEEEeC--CCCHHHHHHHHHcC-CCEEEECch
Confidence 35444554 478888555666788999999998 6 898 5664 46799999999877 788777643
No 184
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=39.49 E-value=95 Score=30.56 Aligned_cols=91 Identities=8% Similarity=0.221 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc-------CC------cccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-------NQ------IGSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-------~~------~GGit~a~~ia~~A~~~g~ 375 (445)
.+..+++++..+ +||+... +.+++.++.+++.+ +|+|.+-. .+ ...++...++++.++..++
T Consensus 173 ~e~I~~ik~~~~--i~Vi~g~--V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~I 247 (400)
T 3ffs_A 173 IRTLKEIKSKMN--IDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGI 247 (400)
T ss_dssp HHHHHHHHTTCC--CEEEEEE--ECSHHHHHHHHHTT-CSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhcCC--CeEEEee--cCCHHHHHHHHHcC-CCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCC
Confidence 456677777776 8987543 35688888877664 78887721 11 1234455666666666789
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..+.. -+...... ++++++..+.+|.
T Consensus 248 PVIA~GGI-~~~~di~k--alalGAd~V~vGt 276 (400)
T 3ffs_A 248 PIIADGGI-RYSGDIGK--ALAVGASSVMIGS 276 (400)
T ss_dssp CEEEESCC-CSHHHHHH--HHTTTCSEEEECG
T ss_pred CEEecCCC-CCHHHHHH--HHHcCCCEEEECh
Confidence 98665532 22222222 3334566666665
No 185
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=38.64 E-value=97 Score=28.99 Aligned_cols=35 Identities=9% Similarity=0.135 Sum_probs=27.0
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHH
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHY 312 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~ 312 (445)
+...++-++.+.+.++++++.++=+|+.+++.+-+
T Consensus 73 G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l 107 (285)
T 3sz8_A 73 GVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPV 107 (285)
T ss_dssp CSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 34445677788888889999999999998776544
No 186
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=38.46 E-value=1.6e+02 Score=29.51 Aligned_cols=94 Identities=15% Similarity=0.251 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-------------cccHHHHHHHHHHHHHc
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVRMSKQA 373 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~-------------~GGit~a~~ia~~A~~~ 373 (445)
..++..+++++.++ .+||+... +.+.++++.+.+.+ +|+|.+...- ...++...++...++..
T Consensus 264 ~~~e~i~~i~~~~p-~~pvi~g~--~~t~e~a~~l~~~G-~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~ 339 (494)
T 1vrd_A 264 RVIETLEMIKADYP-DLPVVAGN--VATPEGTEALIKAG-ADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKY 339 (494)
T ss_dssp HHHHHHHHHHHHCT-TSCEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCC-CceEEeCC--cCCHHHHHHHHHcC-CCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhc
Confidence 35677888998884 28875443 35688888887765 7888873210 11233345555555557
Q ss_pred CCcEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 374 GWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++++..+. ..+......-| ++++..+.+|.
T Consensus 340 ~ipvia~GG-I~~~~di~kal--a~GAd~V~iGr 370 (494)
T 1vrd_A 340 DVPIIADGG-IRYSGDIVKAL--AAGAESVMVGS 370 (494)
T ss_dssp TCCEEEESC-CCSHHHHHHHH--HTTCSEEEESH
T ss_pred CCCEEEECC-cCCHHHHHHHH--HcCCCEEEECH
Confidence 899876553 23333322333 33566665543
No 187
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=38.27 E-value=1.7e+02 Score=27.97 Aligned_cols=129 Identities=11% Similarity=0.088 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEec--ccccccc------------CCc-eeeecccCCCCCCCCccCHHHHHHHHHHh
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDV--AASEFYG------------SDK-TYDLNFKEENNDGSQKISGDALKDLYKSF 291 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~--~a~~~~~------------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~ 291 (445)
.-++.++|+++.+.|+..++.||-=. -++.||. .++ .|+.+.. +..++++....-
T Consensus 183 DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~D 252 (342)
T 1h7n_A 183 DGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPA----------GRGLARRALERD 252 (342)
T ss_dssp TTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTT----------CHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 35788899999999983367776411 1223331 112 5666522 456777654333
Q ss_pred hc-cCCeeeEECCCCcCCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 292 IS-DYPIVSIEDPFDQDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 292 l~-~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
++ -.++.++-=-++. ++-.+++++++ . +|+++-..+ .-..=++...++++.|- =.-+++...-
T Consensus 253 i~EGAD~vMVKPal~Y--LDIi~~vk~~~p~--~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~v~Esl~~ 317 (342)
T 1h7n_A 253 MSEGADGIIVKPSTFY--LDIMRDASEICKD--LPICAYHVS-GEYAMLHAAAEKGVVDL----------KTIAFESHQG 317 (342)
T ss_dssp HHTTCSEEEEESSGGG--HHHHHHHHHHTTT--SCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHH
T ss_pred HHhCCCeEEEecCccH--HHHHHHHHHhccC--CCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHH
Confidence 33 3668888755664 56788999999 6 999887643 22333455566676662 1224444445
Q ss_pred HHHcCCcEEec
Q 043137 370 SKQAGWGVMAS 380 (445)
Q Consensus 370 A~~~g~~~~~~ 380 (445)
.+.+|-.+++.
T Consensus 318 ~kRAGAd~IiT 328 (342)
T 1h7n_A 318 FLRAGARLIIT 328 (342)
T ss_dssp HHHTTCSEEEE
T ss_pred HHhcCCCEEEe
Confidence 56677777653
No 188
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=38.16 E-value=3e+02 Score=27.10 Aligned_cols=126 Identities=9% Similarity=0.104 Sum_probs=77.3
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCCCc---CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPFDQ---DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~---~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++-+++ .+.|++.++..||=-+|. .|++..+.+.+. ..+..+++- ...+..++.+.++.+ ++.|.+=
T Consensus 56 ~~~s~eeKl~I-a~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~-~~~~~v~~~--~r~~~~di~~A~~aG-~~~V~i~ 130 (423)
T 3ivs_A 56 AFFDTEKKIQI-AKALDNFGVDYIELTSPVASEQSRQDCEAICKL-GLKCKILTH--IRCHMDDARVAVETG-VDGVDVV 130 (423)
T ss_dssp CCCCHHHHHHH-HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS-CCSSEEEEE--EESCHHHHHHHHHTT-CSEEEEE
T ss_pred CCcCHHHHHHH-HHHHHHcCCCEEEEeecccCHHHHHHHHHHHhc-CCCCEEEEe--eccChhhHHHHHHcC-CCEEEEE
Confidence 45788898887 567889999999986654 345555555543 223555432 234578888888875 4555542
Q ss_pred c-------------CCcccHHHHHHHHHHHHHcCCcEEecCCCC-CChhhHHH---HHHhhhcCCccccCC
Q 043137 354 V-------------NQIGSVTESIEAVRMSKQAGWGVMASHRSG-ETEDTFIA---DLSVGLATGQIKTGA 407 (445)
Q Consensus 354 ~-------------~~~GGit~a~~ia~~A~~~g~~~~~~~~~~-et~~~~~~---~la~a~~~~~~~~G~ 407 (445)
+ ++-.-+..+.+++++|+++|+.+.++.... .+.....+ ..+...++..+.+.+
T Consensus 131 ~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~D 201 (423)
T 3ivs_A 131 IGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIAD 201 (423)
T ss_dssp EEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred eeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCC
Confidence 2 222335677789999999999987654211 12223333 334555776666544
No 189
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=37.66 E-value=1.2e+02 Score=29.23 Aligned_cols=37 Identities=8% Similarity=0.075 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 312 YAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 312 ~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
-+++++... .||+..-. .+++...++++.+.+|+|-+
T Consensus 278 a~~ik~~~~--~~v~~~g~--~~~~~ae~~l~~G~aD~V~~ 314 (358)
T 4a3u_A 278 SPEIRKVFK--PPLVLNQD--YTFETAQAALDSGVADAISF 314 (358)
T ss_dssp HHHHHHHCC--SCEEEESS--CCHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHHhcC--CcEEEeCC--CCHHHHHHHHHcCCceEeHh
Confidence 355666665 66644333 35899999999999999874
No 190
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=37.47 E-value=2.2e+02 Score=26.83 Aligned_cols=125 Identities=15% Similarity=0.110 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCC--eeeEECC
Q 043137 226 NKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYP--IVSIEDP 303 (445)
Q Consensus 226 ~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~--i~~iEdP 303 (445)
.+|+.+.++.+++.++ +++.+.+-+. ..+..+++++. +..++.+ -..+--|
T Consensus 63 ~~Er~~v~~~~~~~~~--grvpviaGvg------------------------~~~t~~ai~la-~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 63 REERAQLIATARKAVG--PDFPIMAGVG------------------------AHSTRQVLEHI-NDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHHHHHHHHHC--TTSCEEEECC------------------------CSSHHHHHHHH-HHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEeCC------------------------CCCHHHHHHHH-HHHHHcCCCEEEEeCC
Confidence 5777887777776664 5677766663 12456777764 3445444 3344445
Q ss_pred C------CcCC-HHHHHHHHHHhCCCceEEeCcccc------cCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHH
Q 043137 304 F------DQDD-WEHYAKLTSEVGEKVQIVGDDLLV------TNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMS 370 (445)
Q Consensus 304 ~------~~~D-~~~~~~L~~~~~~~vpI~gde~~~------~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A 370 (445)
. ..+. ++-|+.+.+.++ +||+--..-. -+++-+.++.+ ..-+++-+|-+ +|-+....++.+..
T Consensus 116 ~y~~kp~~~~~l~~~f~~ia~a~~--lPiilYn~P~~t~g~~l~~~~~~~La~-~~pnIvgiKds-sgd~~~~~~~~~~~ 191 (318)
T 3qfe_A 116 AYFGKATTPPVIKSFFDDVSCQSP--LPVVIYNFPGVCNGIDLDSDMITTIAR-KNPNVVGVKLT-CASVGKITRLAATL 191 (318)
T ss_dssp CC---CCCHHHHHHHHHHHHHHCS--SCEEEEECCC----CCCCHHHHHHHHH-HCTTEEEEEES-SCCHHHHHHHHHHS
T ss_pred cccCCCCCHHHHHHHHHHHHhhCC--CCEEEEeCCcccCCCCCCHHHHHHHHh-hCCCEEEEEeC-CCCHHHHHHHHHhc
Confidence 2 2222 345678888887 8876544311 13666777764 24589999976 45666666655433
Q ss_pred HHcCCcEEecC
Q 043137 371 KQAGWGVMASH 381 (445)
Q Consensus 371 ~~~g~~~~~~~ 381 (445)
...++.+..|.
T Consensus 192 ~~~~f~v~~G~ 202 (318)
T 3qfe_A 192 PPAAFSVFGGQ 202 (318)
T ss_dssp CGGGCEEEESC
T ss_pred CCCCEEEEEec
Confidence 23346654433
No 191
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=36.37 E-value=1.8e+02 Score=28.10 Aligned_cols=92 Identities=12% Similarity=0.204 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc---CCc----------ccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV---NQI----------GSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~---~~~----------GGit~a~~ia~~A~~~g~ 375 (445)
++..+++++..+ .+||++.. +.+++.++++.+.+ +|+|.+-. +.| ..++...++++.++..++
T Consensus 137 ~~~I~~ik~~~p-~v~Vi~G~--v~t~e~A~~a~~aG-AD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~i 212 (366)
T 4fo4_A 137 LQRIRETRAAYP-HLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGI 212 (366)
T ss_dssp HHHHHHHHHHCT-TCEEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHhcC-CCceEeee--eCCHHHHHHHHHcC-CCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCC
Confidence 345677888873 38875543 45689888887765 78887721 111 234555666666777899
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++...... +...... ++++++..+.+|.
T Consensus 213 PVIA~GGI~-~~~di~k--ala~GAd~V~vGs 241 (366)
T 4fo4_A 213 PVIADGGIR-FSGDISK--AIAAGASCVMVGS 241 (366)
T ss_dssp CEEEESCCC-SHHHHHH--HHHTTCSEEEEST
T ss_pred eEEEeCCCC-CHHHHHH--HHHcCCCEEEECh
Confidence 987655322 2222222 3444677777766
No 192
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=36.32 E-value=2.3e+02 Score=28.50 Aligned_cols=95 Identities=12% Similarity=0.182 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC---Cc----------ccHHHHHHHHHHHHHc
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN---QI----------GSVTESIEAVRMSKQA 373 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~---~~----------GGit~a~~ia~~A~~~ 373 (445)
.-++..++++++.+ .+||++.. +.+.+.++.+++.+ +|+|.+-.+ .| ..++...++++.++..
T Consensus 258 ~~~~~i~~ir~~~p-~~~Vi~g~--v~t~e~a~~l~~aG-aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~ 333 (496)
T 4fxs_A 258 GVLQRIRETRAAYP-HLEIIGGN--VATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY 333 (496)
T ss_dssp HHHHHHHHHHHHCT-TCCEEEEE--ECSHHHHHHHHHHT-CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHCC-CceEEEcc--cCcHHHHHHHHHhC-CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC
Confidence 34467788888884 38886653 34688888887765 677775311 11 2345567777777788
Q ss_pred CCcEEecCCCCCChhhHHHHHHhhhcCCccccCCC
Q 043137 374 GWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 374 g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
+++++..... -+...... |++.++..+.+|..
T Consensus 334 ~iPVIa~GGI-~~~~di~k--ala~GAd~V~iGs~ 365 (496)
T 4fxs_A 334 GIPVIADGGI-RFSGDISK--AIAAGASCVMVGSM 365 (496)
T ss_dssp TCCEEEESCC-CSHHHHHH--HHHTTCSEEEESTT
T ss_pred CCeEEEeCCC-CCHHHHHH--HHHcCCCeEEecHH
Confidence 9998765532 22222212 23446777777763
No 193
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=35.81 E-value=40 Score=31.05 Aligned_cols=46 Identities=13% Similarity=-0.089 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHh----CCCceEEeCcccccCHHHHHHHHhcC-CCCEEEeccC
Q 043137 307 DDWEHYAKLTSEV----GEKVQIVGDDLLVTNPKRVEKAIKEK-TCNALLLKVN 355 (445)
Q Consensus 307 ~D~~~~~~L~~~~----~~~vpI~gde~~~~~~~~~~~~i~~~-a~d~v~ik~~ 355 (445)
-|++.+++|++.+ + +||++.-- ++++++++++++.. .++.+.+--.
T Consensus 188 ~d~eli~~l~~~~~~~~~--iPVIasGG-i~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 188 IDELLVSKLFEWTKDYDD--LKIVYAGG-AKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp CCHHHHHHHHHHHTTCSS--CEEEEESC-CCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred CCHHHHHHHHHhhcccCC--ceEEEeCC-CCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 4899999999999 7 99844322 46799999999873 4666665544
No 194
>2i9x_A Putative septation protein spovg; APC86317.1, staphylococcus epidermidis ATCC 12228, ST genomics, PSI-2, protein structure initiative; 1.80A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=35.11 E-value=39 Score=25.73 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=19.3
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDG 31 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G 31 (445)
.|+||+|+.+.+. ..|+---++.|+.|+-
T Consensus 3 ~m~iTdVri~~~~-~~g~lka~asVt~dd~ 31 (87)
T 2i9x_A 3 AMKVTDVRLRKIQ-TDGRMKALVSITLDEA 31 (87)
T ss_dssp CCCEEEEEEEECC-SSSSEEEEEEEEETTT
T ss_pred ccEEEEEEEEEcC-CCCCEEEEEEEEECCE
Confidence 4999999999984 3343234566666653
No 195
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=35.08 E-value=2e+02 Score=25.16 Aligned_cols=93 Identities=6% Similarity=-0.006 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCc---CCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQ---DDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~---~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
+.+++++.+.+ ++. ++.|+|--++. .-++..++|++.. + .||..|=-....+..+.+.+..-.+|++.+...
T Consensus 17 ~~~~~~~~~~~-~~~-~vd~ie~g~~~~~~~G~~~i~~lr~~~~~--~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~ 92 (218)
T 3jr2_A 17 NLTDAVAVASN-VAS-YVDVIEVGTILAFAEGMKAVSTLRHNHPN--HILVCDMKTTDGGAILSRMAFEAGADWITVSAA 92 (218)
T ss_dssp SHHHHHHHHHH-HGG-GCSEEEECHHHHHHHTTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHHTCSEEEEETT
T ss_pred CHHHHHHHHHH-hcC-CceEEEeCcHHHHhcCHHHHHHHHHhCCC--CcEEEEEeecccHHHHHHHHHhcCCCEEEEecC
Confidence 45677777554 543 57888865442 3456678888874 4 677654322223454444444446788887755
Q ss_pred CcccHHHHHHHHHHHHHcCCcEE
Q 043137 356 QIGSVTESIEAVRMSKQAGWGVM 378 (445)
Q Consensus 356 ~~GGit~a~~ia~~A~~~g~~~~ 378 (445)
- +.....+..+.++++|+.++
T Consensus 93 ~--~~~~~~~~~~~~~~~g~~~~ 113 (218)
T 3jr2_A 93 A--HIATIAACKKVADELNGEIQ 113 (218)
T ss_dssp S--CHHHHHHHHHHHHHHTCEEE
T ss_pred C--CHHHHHHHHHHHHHhCCccc
Confidence 3 22335677788889999875
No 196
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.95 E-value=42 Score=30.18 Aligned_cols=66 Identities=15% Similarity=0.056 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
|++.++++++.++ +||++.-- +++++++.++++.+ +|.+.+=-.-..+-....++.+.++..|+++
T Consensus 184 ~~~~i~~l~~~~~--ipvia~GG-I~~~~d~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 184 DLRLTRMVAEAVG--VPVIASGG-AGRMEHFLEAFQAG-AEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp CHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred CHHHHHHHHHHcC--CCEEEeCC-CCCHHHHHHHHHCC-CHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 7999999999987 89844322 46799999998644 6766654322222223444455567777764
No 197
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=34.77 E-value=1.6e+02 Score=29.66 Aligned_cols=110 Identities=11% Similarity=0.167 Sum_probs=65.3
Q ss_pred hccCCeeeEECCCC----cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-----------
Q 043137 292 ISDYPIVSIEDPFD----QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ----------- 356 (445)
Q Consensus 292 l~~~~i~~iEdP~~----~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~----------- 356 (445)
+.+.++..||=-.. ...++-.+++++.++ .+||++.+. .+.+.++.+.+.+ +|+|.+-..-
T Consensus 263 ~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~-~~pvi~~~v--~t~~~a~~l~~aG-ad~I~vg~~~G~~~~t~~~~~ 338 (514)
T 1jcn_A 263 LTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYP-HLQVIGGNV--VTAAQAKNLIDAG-VDGLRVGMGCGSICITQEVMA 338 (514)
T ss_dssp HHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCT-TCEEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSCCBTTBCCCS
T ss_pred HHHcCCCEEEeeccCCcchhHHHHHHHHHHhCC-CCceEeccc--chHHHHHHHHHcC-CCEEEECCCCCcccccccccC
Confidence 33466666662111 122467788888882 399876543 4688888888776 7888773210
Q ss_pred cc--cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCccccCCC
Q 043137 357 IG--SVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 357 ~G--Git~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
.| ..+....+..+++..+++++..+.. .+...... ++++++..+.+|.+
T Consensus 339 ~g~~~~~~~~~~~~~~~~~~ipVia~GGI-~~~~di~k--ala~GAd~V~iG~~ 389 (514)
T 1jcn_A 339 CGRPQGTAVYKVAEYARRFGVPIIADGGI-QTVGHVVK--ALALGASTVMMGSL 389 (514)
T ss_dssp CCCCHHHHHHHHHHHHGGGTCCEEEESCC-CSHHHHHH--HHHTTCSEEEESTT
T ss_pred CCccchhHHHHHHHHHhhCCCCEEEECCC-CCHHHHHH--HHHcCCCeeeECHH
Confidence 12 2456666777788889998765532 23222222 33345666666663
No 198
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=34.76 E-value=65 Score=29.85 Aligned_cols=94 Identities=13% Similarity=0.182 Sum_probs=58.2
Q ss_pred cCHHHHHHHHHHhhccCCeeeEE----CCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 279 ISGDALKDLYKSFISDYPIVSIE----DPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iE----dP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.++.+.. +..++.+..+|. +++-...++.++.+++.++ +||.-.+.. -++.++......+ +|.|.+-.
T Consensus 72 ~~p~~~A----~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~--lPvl~kdfi-id~~qv~~A~~~G-AD~VlLi~ 143 (272)
T 3qja_A 72 ADPAKLA----QAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVS--IPVLRKDFV-VQPYQIHEARAHG-ADMLLLIV 143 (272)
T ss_dssp -CHHHHH----HHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCS--SCEEEESCC-CSHHHHHHHHHTT-CSEEEEEG
T ss_pred CCHHHHH----HHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCC--CCEEECccc-cCHHHHHHHHHcC-CCEEEEec
Confidence 3555543 334455544443 3333334667888888887 998555554 4577777776655 57766532
Q ss_pred CCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 355 NQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 355 ~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.-. ...++.++...|+..|+.+++..
T Consensus 144 a~l-~~~~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 144 AAL-EQSVLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp GGS-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHCCCcEEEEc
Confidence 221 24678888889999999987654
No 199
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=34.03 E-value=1.4e+02 Score=27.42 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=48.8
Q ss_pred HHHHHHHHHhCCCceEEeC----cccccCHHHHHH-HHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCC
Q 043137 310 EHYAKLTSEVGEKVQIVGD----DLLVTNPKRVEK-AIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSG 384 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gd----e~~~~~~~~~~~-~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~ 384 (445)
+..+++++..+ +||++- ..+.+..+.|.+ +.+.++--++.+|+.- .+..+....++++|+..+.=. ..
T Consensus 81 ~~v~~ir~~~~--~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~----ee~~~~~~~~~~~gl~~i~li-ap 153 (271)
T 1ujp_A 81 ELVREVRALTE--KPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP----DEDPGLVRLAQEIGLETVFLL-AP 153 (271)
T ss_dssp HHHHHHHHHCC--SCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG----GGCHHHHHHHHHHTCEEECEE-CT
T ss_pred HHHHHHHhcCC--CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH----HHHHHHHHHHHHcCCceEEEe-CC
Confidence 55778887766 888661 111112344443 4445543388888874 566777788899998643211 22
Q ss_pred CChhhHHHHHHhhhcCCccccC
Q 043137 385 ETEDTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 385 et~~~~~~~la~a~~~~~~~~G 406 (445)
.+....+..++.. ...|+.+.
T Consensus 154 ~s~~eri~~ia~~-~~gfiy~v 174 (271)
T 1ujp_A 154 TSTDARIATVVRH-ATGFVYAV 174 (271)
T ss_dssp TCCHHHHHHHHTT-CCSCEEEE
T ss_pred CCCHHHHHHHHHh-CCCCEEEE
Confidence 2333333444332 44666554
No 200
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=33.94 E-value=87 Score=29.52 Aligned_cols=88 Identities=14% Similarity=0.137 Sum_probs=46.3
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
...++-++.+.+.++++++.++=+|+.+++.+-+.++ .+ -+.|-+-+ +++..=++.+- +.---|.+|-....
T Consensus 95 lg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~---vd-~lkIgA~~--~~n~~LLr~va--~~gkPVilK~Gms~ 166 (298)
T 3fs2_A 95 IGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV---VD-VLQIPAFL--CRQTDLLIAAA--RTGRVVNVKKGQFL 166 (298)
T ss_dssp CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT---CS-EEEECGGG--TTCHHHHHHHH--HTTSEEEEECCTTC
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh---CC-EEEECccc--cCCHHHHHHHH--ccCCcEEEeCCCCC
Confidence 3345667778888888999999999977655443322 21 12222222 23333222222 22334555555544
Q ss_pred cHHHHHHHHHHHHHcC
Q 043137 359 SVTESIEAVRMSKQAG 374 (445)
Q Consensus 359 Git~a~~ia~~A~~~g 374 (445)
++.|++.+++.+.+.|
T Consensus 167 t~~ei~~ave~i~~~G 182 (298)
T 3fs2_A 167 APWDMKNVLAKITESG 182 (298)
T ss_dssp CGGGHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 5555555555555543
No 201
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=33.81 E-value=2.1e+02 Score=25.18 Aligned_cols=109 Identities=7% Similarity=0.092 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcC-CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQD-DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+.+++++.... +-+.++.+||=.+... ..+.+++++++.+ .+-+-.+-. .+.+++...++.++ |++. .|
T Consensus 26 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~vgagtv--i~~d~~~~A~~aGA-d~v~-----~p 95 (214)
T 1wbh_A 26 KLEHAVPMAKA-LVAGGVRVLNVTLRTECAVDAIRAIAKEVP-EAIVGAGTV--LNPQQLAEVTEAGA-QFAI-----SP 95 (214)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEESCSTTHHHHHHHHHHHCT-TSEEEEESC--CSHHHHHHHHHHTC-SCEE-----ES
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeCCChhHHHHHHHHHHHCc-CCEEeeCEE--EEHHHHHHHHHcCC-CEEE-----cC
Confidence 34566666444 4467899999887543 3456677888886 255544433 34688888888875 5553 22
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+ .-..+++.|+.+|+++++|..+ .++ +.-|...++.++++
T Consensus 96 ~--~d~~v~~~~~~~g~~~i~G~~t-~~e----~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 96 G--LTEPLLKAATEGTIPLIPGIST-VSE----LMLGMDYGLKEFKF 135 (214)
T ss_dssp S--CCHHHHHHHHHSSSCEEEEESS-HHH----HHHHHHTTCCEEEE
T ss_pred C--CCHHHHHHHHHhCCCEEEecCC-HHH----HHHHHHCCCCEEEE
Confidence 2 2356778888899998776432 111 23344557777776
No 202
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=33.79 E-value=1.6e+02 Score=27.15 Aligned_cols=96 Identities=17% Similarity=0.075 Sum_probs=67.3
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+..++-++.+.+.++++++-++=+|+.+++.+-+.++ .+ -+.| |--. +++.+ +.+.+. +.--.|.+|-+..|
T Consensus 58 ~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~---vd-~~~I-gA~~-~rn~~-ll~~~a-~~~~PV~lK~G~~~ 129 (267)
T 2nwr_A 58 HGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV---AD-IIQI-PAFL-CRQTD-LLLAAA-KTGRAVNVKKGQFL 129 (267)
T ss_dssp SCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT---CS-EEEE-CGGG-TTCHH-HHHHHH-TTTSEEEEECCTTC
T ss_pred ccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc---CC-EEEE-Cccc-ccCHH-HHHHHH-cCCCcEEEeCCCCC
Confidence 3456667777887889999999999988876666542 22 1334 3332 34545 555553 56778999999989
Q ss_pred cHHHHHHHHHHHHHcCC-cEEecCC
Q 043137 359 SVTESIEAVRMSKQAGW-GVMASHR 382 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~-~~~~~~~ 382 (445)
++.+++.++...++.|- .+++-|+
T Consensus 130 t~~e~~~Av~~i~~~GN~~i~L~~r 154 (267)
T 2nwr_A 130 APWDTKNVVEKLKFGGAKEIYLTER 154 (267)
T ss_dssp CGGGGHHHHHHHHHTTCSSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99999999999888874 5666554
No 203
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=33.45 E-value=37 Score=30.88 Aligned_cols=66 Identities=15% Similarity=0.003 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
|++.+++|++.++ +||++.-- +++++++.++++.+ +|.+.+=-.-..+-....++.++.+..|+.+
T Consensus 188 ~~~~i~~l~~~~~--ipvia~GG-I~~~ed~~~~~~~G-adgv~vgsal~~~~~~~~~~~~~l~~~g~~~ 253 (266)
T 2w6r_A 188 DTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLAG-ADAALAASVFHFREIDMRELKEYLKKHGVNV 253 (266)
T ss_dssp CHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHHT-CSEEEESTTTC--------------------
T ss_pred CHHHHHHHHHHcC--CCEEEeCC-CCCHHHHHHHHHcC-CHHHHccHHHHcCCCCHHHHHHHHHHCCCcc
Confidence 6889999998887 88844432 56799999998754 6777766544444445666666777777764
No 204
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=33.16 E-value=1e+02 Score=29.93 Aligned_cols=40 Identities=5% Similarity=0.190 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++...++++.++ +||+... +.++++++.+++. .+|.|.+
T Consensus 199 ~~~~i~~l~~~~~--~pvi~gg--i~t~e~a~~~~~~-Gad~i~v 238 (393)
T 2qr6_A 199 EALNLKEFIGSLD--VPVIAGG--VNDYTTALHMMRT-GAVGIIV 238 (393)
T ss_dssp ---CHHHHHHHCS--SCEEEEC--CCSHHHHHHHHTT-TCSEEEE
T ss_pred cHHHHHHHHHhcC--CCEEECC--cCCHHHHHHHHHc-CCCEEEE
Confidence 4556788898887 9985533 3468998888875 4788888
No 205
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=32.68 E-value=57 Score=30.00 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=41.2
Q ss_pred HHHHHhcCCCCEEEeccCC-cc----cHHHHHHHHHHHHHcCCcEEecCCCCC-------Ch--hhHHHHHHhhhcCCcc
Q 043137 338 VEKAIKEKTCNALLLKVNQ-IG----SVTESIEAVRMSKQAGWGVMASHRSGE-------TE--DTFIADLSVGLATGQI 403 (445)
Q Consensus 338 ~~~~i~~~a~d~v~ik~~~-~G----Git~a~~ia~~A~~~g~~~~~~~~~~e-------t~--~~~~~~la~a~~~~~~ 403 (445)
+++.++. .+|.|++-++- .+ -+.++.++.+.|+.+|+++++-+.... +. ...++.++...++.|+
T Consensus 98 ve~Ai~~-Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~v 176 (263)
T 1w8s_A 98 VEEAVSL-GASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAM 176 (263)
T ss_dssp HHHHHHT-TCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHC-CCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEE
Confidence 4444443 35666654411 11 144556777778888888766542200 21 2334577777788888
Q ss_pred ccCCCCCch
Q 043137 404 KTGAPCRSE 412 (445)
Q Consensus 404 ~~G~~~~~e 412 (445)
|.+.|.+.|
T Consensus 177 kt~~~~~~e 185 (263)
T 1w8s_A 177 KIKYTGDPK 185 (263)
T ss_dssp EEECCSSHH
T ss_pred EEcCCCCHH
Confidence 887654333
No 206
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=32.52 E-value=2.5e+02 Score=25.03 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
.|++.++++++. + +|++++-- +++++++.++++.+ +|.+.+
T Consensus 169 ~~~~li~~l~~~-~--ipvIA~GG-I~t~~d~~~~~~~G-adgV~V 209 (229)
T 3q58_A 169 PDLAMVTQLSHA-G--CRVIAEGR-YNTPALAANAIEHG-AWAVTV 209 (229)
T ss_dssp CCHHHHHHHHTT-T--CCEEEESS-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCHHHHHHHHHc-C--CCEEEECC-CCCHHHHHHHHHcC-CCEEEE
Confidence 478888888876 5 99866543 56799999999885 777776
No 207
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=32.49 E-value=2.7e+02 Score=24.79 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
.|++.++++++. + +|++++-- +++++++.++++.+ +|.+.+=
T Consensus 169 ~~~~~i~~l~~~-~--ipvIA~GG-I~t~~d~~~~~~~G-adgV~VG 210 (232)
T 3igs_A 169 PDLPLVKALHDA-G--CRVIAEGR-YNSPALAAEAIRYG-AWAVTVG 210 (232)
T ss_dssp CCHHHHHHHHHT-T--CCEEEESC-CCSHHHHHHHHHTT-CSEEEEC
T ss_pred CCHHHHHHHHhc-C--CcEEEECC-CCCHHHHHHHHHcC-CCEEEEe
Confidence 478899999887 6 99865543 46799999999885 7777763
No 208
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.76 E-value=82 Score=28.80 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=61.8
Q ss_pred cCHHHHHHHHHHhhccCC---eeeE-ECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 279 ISGDALKDLYKSFISDYP---IVSI-EDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~---i~~i-EdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.++.+..+. .++.+ +..+ ++.+-....+.++.+++.++ +||.-.+. ..+..++...... .+|.|.+..
T Consensus 65 ~~p~~~A~~----~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~--lPvl~kdf-I~d~~qi~~a~~~-GAD~VlL~~ 136 (254)
T 1vc4_A 65 VDPVEAALA----YARGGARAVSVLTEPHRFGGSLLDLKRVREAVD--LPLLRKDF-VVDPFMLEEARAF-GASAALLIV 136 (254)
T ss_dssp CCHHHHHHH----HHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC--SCEEEESC-CCSHHHHHHHHHT-TCSEEEEEH
T ss_pred CCHHHHHHH----HHHcCCCEEEEecchhhhccCHHHHHHHHHhcC--CCEEECCc-CCCHHHHHHHHHc-CCCEEEECc
Confidence 455554433 33444 4444 44444558899999999988 99844444 4667788775544 567777766
Q ss_pred CCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 355 NQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 355 ~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
.-.. ..+.++...|+..|+.+++-.
T Consensus 137 ~~l~--~~l~~l~~~a~~lGl~~lvev 161 (254)
T 1vc4_A 137 ALLG--ELTGAYLEEARRLGLEALVEV 161 (254)
T ss_dssp HHHG--GGHHHHHHHHHHHTCEEEEEE
T ss_pred cchH--HHHHHHHHHHHHCCCeEEEEE
Confidence 5443 578888888999999976543
No 209
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=31.62 E-value=3.1e+02 Score=25.20 Aligned_cols=117 Identities=13% Similarity=0.059 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcCC-------------------------HHHHHHHHHH-hCCCceE--EeCcc-
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQDD-------------------------WEHYAKLTSE-VGEKVQI--VGDDL- 330 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~D-------------------------~~~~~~L~~~-~~~~vpI--~gde~- 330 (445)
+.+..++.+. .+++.+..+||=-+|..| ++..+++|++ .. +|| ++.-.
T Consensus 32 ~~~~~~~~~~-~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~--~Pivlm~Y~n~ 108 (271)
T 3nav_A 32 NPEQSLAIMQ-TLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPE--TPIGLLMYANL 108 (271)
T ss_dssp CHHHHHHHHH-HHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--SCEEEEECHHH
T ss_pred CHHHHHHHHH-HHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--CCEEEEecCcH
Confidence 4566666644 456667777774333311 3455666766 55 787 43321
Q ss_pred -cccCHHHHHH-HHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 331 -LVTNPKRVEK-AIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 331 -~~~~~~~~~~-~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+....++|.+ +.+.+.-.++.+|+.- .+..+....|+++|+..+.-. ...|....+..++-. +..|+..
T Consensus 109 v~~~g~~~f~~~~~~aGvdGvIipDlp~----ee~~~~~~~~~~~gl~~I~lv-ap~t~~eri~~i~~~-~~gfiY~ 179 (271)
T 3nav_A 109 VYARGIDDFYQRCQKAGVDSVLIADVPT----NESQPFVAAAEKFGIQPIFIA-PPTASDETLRAVAQL-GKGYTYL 179 (271)
T ss_dssp HHHTCHHHHHHHHHHHTCCEEEETTSCG----GGCHHHHHHHHHTTCEEEEEE-CTTCCHHHHHHHHHH-CCSCEEE
T ss_pred HHHHhHHHHHHHHHHCCCCEEEECCCCH----HHHHHHHHHHHHcCCeEEEEE-CCCCCHHHHHHHHHH-CCCeEEE
Confidence 1123455554 4455555557888764 578889999999999854333 234444554555443 5567665
No 210
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=31.53 E-value=2.6e+02 Score=29.08 Aligned_cols=141 Identities=11% Similarity=0.123 Sum_probs=83.6
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC--cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD--QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|.++.-++ . +.-+.++.||=-+|- ++|....+++-+..+.+++|++-=......+.+...++ ++|.+.+--+
T Consensus 190 ~ltekD~~dl-~-f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~--~sDGImVARG 265 (606)
T 3t05_A 190 GITEKDAEDI-R-FGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILE--VSDGLMVARG 265 (606)
T ss_dssp SSCHHHHHHH-H-HHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHH--HCSCEEEEHH
T ss_pred CCChhHHHHH-H-HHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHH--hCCEEEEccc
Confidence 3566665443 2 323467888888885 56777777776666556887665221122233444454 3889987322
Q ss_pred -------CcccHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHhhh--cCCccccC-----CCCCchhH
Q 043137 356 -------QIGSVTESIEAVRMSKQAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKTG-----APCRSERL 414 (445)
Q Consensus 356 -------~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~G-----~~~~~e~~ 414 (445)
.---..--++++..|+++|.++++..++.||.. +=..|+|-|. ++..+.+. +....|-+
T Consensus 266 DLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~yPveaV 345 (606)
T 3t05_A 266 DMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAV 345 (606)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHH
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCCHHHHH
Confidence 111233447889999999999999888888732 2345666664 56655543 23345555
Q ss_pred HHHHHHHH
Q 043137 415 AKYNQLLR 422 (445)
Q Consensus 415 ~k~n~ll~ 422 (445)
.-.++..+
T Consensus 346 ~~m~~I~~ 353 (606)
T 3t05_A 346 KTMRNIAV 353 (606)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 211
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=31.03 E-value=1.2e+02 Score=30.57 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC-----------C--cccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-----------Q--IGSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-----------~--~GGit~a~~ia~~A~~~g~ 375 (445)
++..+.|++... +|+++.+.. ++++.+.++ .+|.+.+-.. . ...++....+..++++.++
T Consensus 257 L~~I~~l~~~~~--vpvi~k~v~--~~~~a~~l~---G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~v 329 (486)
T 2cu0_A 257 IKSMKEMRQKVD--ADFIVGNIA--NPKAVDDLT---FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGL 329 (486)
T ss_dssp HHHHHHHHHTCC--SEEEEEEEC--CHHHHTTCT---TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHhC--CccccCCcC--CHHHHHHhh---CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCC
Confidence 344567777776 999888753 578777665 6788877221 0 1234556666777778899
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCCCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+++..+.. -+...... |+++++..+..|.+.
T Consensus 330 pVia~GGi-~~~~di~k--alalGA~~v~~g~~~ 360 (486)
T 2cu0_A 330 YVIADGGI-RYSGDIVK--AIAAGADAVMLGNLL 360 (486)
T ss_dssp EEEEESCC-CSHHHHHH--HHHTTCSEEEESTTT
T ss_pred cEEecCCC-CCHHHHHH--HHHcCCCceeeChhh
Confidence 98665532 22222223 344578888888865
No 212
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=30.90 E-value=1.5e+02 Score=28.05 Aligned_cols=127 Identities=16% Similarity=0.162 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEE---ecccccccc-----------CCc-eeeecccCCCCCCCCccCHHHHHHHHHHh
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGM---DVAASEFYG-----------SDK-TYDLNFKEENNDGSQKISGDALKDLYKSF 291 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~v---D~~a~~~~~-----------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~ 291 (445)
.-++.++|+++.+.|+. ++.||- -. ++.||. .++ .|+.+. -+..|+++....-
T Consensus 168 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~GDRktYQmdp----------aN~~EAlre~~~D 235 (323)
T 1l6s_A 168 DGQVQAIRQALDAAGFK-DTAIMSYSTKF-ASSFYGPFREAAGSALKGDRKSYQMNP----------MNRREAIRESLLD 235 (323)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEBCCCEEB-CCSCCHHHHHHHTCCCSSCCTTTSBCT----------TCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCC-CceeeehhHHH-hHHhhHHHHHHhcCCCCCCccccCCCC----------CCHHHHHHHHHhh
Confidence 35788999999999974 677763 22 223331 112 566652 2456777654433
Q ss_pred hc-cCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHH
Q 043137 292 IS-DYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMS 370 (445)
Q Consensus 292 l~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A 370 (445)
++ -.++.++-=-++. ++-.+++++++. +|+++-..+ .-..=++...++++.|- =.-+++...-.
T Consensus 236 i~EGAD~vMVKPal~Y--LDIi~~vk~~~~--~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~vlEsl~~~ 300 (323)
T 1l6s_A 236 EAQGADCLMVKPAGAY--LDIVRELRERTE--LPIGAYQVS-GEYAMIKFAALAGAIDE----------EKVVLESLGSI 300 (323)
T ss_dssp HHTTCSBEEEESCTTC--HHHHHHHHTTCS--SCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHHH
T ss_pred HHhCCceEEEecCcch--hHHHHHHHHhcC--CCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHHH
Confidence 33 3568888855664 567889999987 999887643 22333455666777662 12234444445
Q ss_pred HHcCCcEEec
Q 043137 371 KQAGWGVMAS 380 (445)
Q Consensus 371 ~~~g~~~~~~ 380 (445)
+.+|-.+++.
T Consensus 301 kRAGAd~IiT 310 (323)
T 1l6s_A 301 KRAGADLIFS 310 (323)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCCEEee
Confidence 6677776553
No 213
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=30.60 E-value=1.9e+02 Score=27.77 Aligned_cols=91 Identities=8% Similarity=0.221 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc-------CC------cccHHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-------NQ------IGSVTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-------~~------~GGit~a~~ia~~A~~~g~ 375 (445)
.+..+++++..+ +||+... +.+++.++.+++.+ +|+|.+-. .+ ...++...++++.++..++
T Consensus 134 ~~~i~~i~~~~~--~~Vivg~--v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~i 208 (361)
T 3khj_A 134 IRTLKEIKSKMN--IDVIVGN--VVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGI 208 (361)
T ss_dssp HHHHHHHHHHCC--CEEEEEE--ECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC--CcEEEcc--CCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCC
Confidence 356677788876 9987543 35688888887665 68887621 11 1235555666667777899
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..... .+...... ++++++..+.+|.
T Consensus 209 PVIA~GGI-~~~~di~k--ala~GAd~V~vGs 237 (361)
T 3khj_A 209 PIIADGGI-RYSGDIGK--ALAVGASSVMIGS 237 (361)
T ss_dssp CEEEESCC-CSHHHHHH--HHHHTCSEEEEST
T ss_pred eEEEECCC-CCHHHHHH--HHHcCCCEEEECh
Confidence 98665532 22222222 2334566666665
No 214
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=30.53 E-value=53 Score=32.22 Aligned_cols=35 Identities=3% Similarity=0.093 Sum_probs=24.3
Q ss_pred cCHHHHHHHHHHhhccCCeeeEECCCCcCCHHHHHH
Q 043137 279 ISGDALKDLYKSFISDYPIVSIEDPFDQDDWEHYAK 314 (445)
Q Consensus 279 ~t~~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
++.++. +.+.+.++++++.|+=+||+.++.+-+.+
T Consensus 98 l~~e~~-~~L~~~~~~~Gi~~~stpfD~~svd~l~~ 132 (385)
T 1vli_A 98 MPAEWI-LPLLDYCREKQVIFLSTVCDEGSADLLQS 132 (385)
T ss_dssp SCGGGH-HHHHHHHHHTTCEEECBCCSHHHHHHHHT
T ss_pred CCHHHH-HHHHHHHHHcCCcEEEccCCHHHHHHHHh
Confidence 343443 44577888999999999998766555443
No 215
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=30.47 E-value=2.1e+02 Score=27.18 Aligned_cols=127 Identities=13% Similarity=0.166 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEE---ecccccccc------------CCc-eeeecccCCCCCCCCccCHHHHHHHHHHh
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGM---DVAASEFYG------------SDK-TYDLNFKEENNDGSQKISGDALKDLYKSF 291 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~v---D~~a~~~~~------------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~~ 291 (445)
-++.++|+++.+.|+...+.||- -. ++.||. .++ .|+.+.. +..|+++....-
T Consensus 173 GrV~aIR~aLd~~G~~~~v~ImsYsaKy-ASafYGPFRdAa~Sap~~GDRktYQmdpa----------N~~EAlre~~~D 241 (330)
T 1pv8_A 173 GRVEAIKEALMAHGLGNRVSVMSYSAKF-ASCFYGPFRDAAKSSPAFGDRRCYQLPPG----------ARGLALRAVDRD 241 (330)
T ss_dssp CHHHHHHHHHHHTTCTTTCEEBCCCEEC-CCGGGHHHHHCC-------------CCTT----------CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCcCCceEeehhHHH-hHhhhhHHHHHHhcCCCCCCccccCCCCC----------CHHHHHHHHHhh
Confidence 47888999999999852377763 11 122331 122 6776522 456777654433
Q ss_pred hc-cCCeeeEECCCCcCCHHHHHHHHHHh-CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 292 IS-DYPIVSIEDPFDQDDWEHYAKLTSEV-GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 292 l~-~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
++ -.++.++-=-++. ++-.+++++++ . +|+++-..+ .-..=++...++++.|- =.-+++...-
T Consensus 242 i~EGAD~vMVKPal~Y--LDIi~~vk~~~p~--~P~aaYqVS-GEYAMikaAa~~GwiD~----------~~~v~Esl~~ 306 (330)
T 1pv8_A 242 VREGADMLMVKPGMPY--LDIVREVKDKHPD--LPLAVYHVS-GEFAMLWHGAQAGAFDL----------KAAVLEAMTA 306 (330)
T ss_dssp HHTTCSBEEEESCGGG--HHHHHHHHHHSTT--SCEEEEECH-HHHHHHHHHHHTTSSCH----------HHHHHHHHHH
T ss_pred HHhCCceEEEecCccH--HHHHHHHHHhcCC--CCeEEEEcC-cHHHHHHHHHHcCCccH----------HHHHHHHHHH
Confidence 33 3568888755664 56788999999 6 999887643 22333455666777662 1223444444
Q ss_pred HHHcCCcEEec
Q 043137 370 SKQAGWGVMAS 380 (445)
Q Consensus 370 A~~~g~~~~~~ 380 (445)
.+.+|-.+++.
T Consensus 307 ~kRAGAd~IiT 317 (330)
T 1pv8_A 307 FRRAGADIIIT 317 (330)
T ss_dssp HHHHTCSEEEE
T ss_pred HHhcCCCEEee
Confidence 55667776553
No 216
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=30.25 E-value=1.7e+02 Score=29.59 Aligned_cols=100 Identities=10% Similarity=0.200 Sum_probs=61.2
Q ss_pred CCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-------------cccHHHHHHHHH
Q 043137 302 DPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-------------IGSVTESIEAVR 368 (445)
Q Consensus 302 dP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~-------------~GGit~a~~ia~ 368 (445)
+|....-++..++++++.+ .+||++.+. .+.+..+.+++.+ +|+|.+...- ...++...++++
T Consensus 278 ~g~~~~v~~~i~~i~~~~~-~~~vi~g~v--~t~e~a~~~~~aG-ad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~ 353 (511)
T 3usb_A 278 HGHSQGVIDKVKEVRAKYP-SLNIIAGNV--ATAEATKALIEAG-ANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCAT 353 (511)
T ss_dssp CTTSHHHHHHHHHHHHHCT-TSEEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHhCC-CceEEeeee--ccHHHHHHHHHhC-CCEEEECCCCccccccccccCCCCCcHHHHHHHHH
Confidence 3433334467788888875 378866653 4688888887765 5777653211 223566677888
Q ss_pred HHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCccccCCC
Q 043137 369 MSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 369 ~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
.++..+++++.........+ ... |+++++..+.+|.+
T Consensus 354 ~~~~~~iPVIa~GGI~~~~d-i~k--ala~GA~~V~vGs~ 390 (511)
T 3usb_A 354 EARKHGIPVIADGGIKYSGD-MVK--ALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHTTTCCEEEESCCCSHHH-HHH--HHHTTCSEEEESTT
T ss_pred HHHhCCCcEEEeCCCCCHHH-HHH--HHHhCchhheecHH
Confidence 88888999877553322222 112 33446777777764
No 217
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=30.06 E-value=2.1e+02 Score=25.37 Aligned_cols=70 Identities=7% Similarity=0.088 Sum_probs=46.3
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCC----CcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEE
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPF----DQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNAL 350 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~----~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v 350 (445)
.++.++..+. .+.+.+.+..+|-=-- ..-+++..+.+++.++.++||.+.-- +.+.+++.++++.+ +|.+
T Consensus 128 ~l~~~~~~~~-a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GG-I~t~~da~~~l~aG-A~~i 201 (225)
T 1mzh_A 128 YLNEEEIKKA-VEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGG-IRDLETAISMIEAG-ADRI 201 (225)
T ss_dssp GCCHHHHHHH-HHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESS-CCSHHHHHHHHHTT-CSEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECC-CCCHHHHHHHHHhC-chHH
Confidence 3566665554 6677778888884221 11277888999988855599833332 35699999999977 5543
No 218
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=29.94 E-value=1.9e+02 Score=27.67 Aligned_cols=128 Identities=16% Similarity=0.212 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEec--ccccccc-------------CCc-eeeecccCCCCCCCCccCHHHHHHHHHH
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGMDV--AASEFYG-------------SDK-TYDLNFKEENNDGSQKISGDALKDLYKS 290 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~vD~--~a~~~~~-------------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~~~ 290 (445)
.-++.++|+++.+.|+. ++.||-=. -++.||. .++ .|+.+.. +..|+++....
T Consensus 187 DGrV~aIR~aLd~~G~~-~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa----------N~~EAlrE~~l 255 (356)
T 3obk_A 187 DGRVSAIRESLDMEGCT-DTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS----------NSREAEREAEA 255 (356)
T ss_dssp TTHHHHHHHHHHHTTCT-TSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT----------CSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHCCCC-CcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC----------CHHHHHHHHHh
Confidence 35788899999999974 77777421 1233441 112 5665522 34566655433
Q ss_pred hhc-cCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 291 FIS-DYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 291 ~l~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
-++ -.++.++.=-++. ++-.+++++++. +|+++-..+ .-..=++...++++.|- =.-+++...-
T Consensus 256 Di~EGAD~vMVKPal~Y--LDIi~~vk~~~~--~PvaaYqVS-GEYAMikAAa~~GwiD~----------~~~v~Esl~~ 320 (356)
T 3obk_A 256 DASEGADMLMVKPGLPY--LDVLAKIREKSK--LPMVAYHVS-GEYAMLKAAAEKGYISE----------KDTVLEVLKS 320 (356)
T ss_dssp HHHTTCSEEEEESSGGG--HHHHHHHHHHCS--SCEEEEECH-HHHHHHHHHHHHTSSCH----------HHHHHHHHHH
T ss_pred hHhcCCCEEEecCCCcH--HHHHHHHHhcCC--CCEEEEEcc-HHHHHHHHHHHcCCccH----------HHHHHHHHHH
Confidence 333 3668888855664 567888999987 999887643 11233445566777762 1223344444
Q ss_pred HHHcCCcEEec
Q 043137 370 SKQAGWGVMAS 380 (445)
Q Consensus 370 A~~~g~~~~~~ 380 (445)
.+.+|-.+++.
T Consensus 321 ~kRAGAd~IiT 331 (356)
T 3obk_A 321 FRRAGADAVAT 331 (356)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEeh
Confidence 55667776553
No 219
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=29.62 E-value=1.9e+02 Score=28.12 Aligned_cols=92 Identities=9% Similarity=0.189 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc-----------CCccc--HHHHHHHHHHHHHcCC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV-----------NQIGS--VTESIEAVRMSKQAGW 375 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~-----------~~~GG--it~a~~ia~~A~~~g~ 375 (445)
++-.+++++.++ .+||+... +.++++++.+.+.+ +|+|.+-. ...|+ ++...++...++..++
T Consensus 182 ~e~i~~ir~~~~-~~pviv~~--v~~~~~a~~a~~~G-ad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~i 257 (404)
T 1eep_A 182 IELIKKIKTKYP-NLDLIAGN--IVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNI 257 (404)
T ss_dssp HHHHHHHHHHCT-TCEEEEEE--ECSHHHHHHHHTTT-CSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHCC-CCeEEEcC--CCcHHHHHHHHhcC-CCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCc
Confidence 455577788872 28987432 34578887777655 79988821 11122 3334445555555689
Q ss_pred cEEecCCCCCChhhHHHHHHhhhcCCccccCC
Q 043137 376 GVMASHRSGETEDTFIADLSVGLATGQIKTGA 407 (445)
Q Consensus 376 ~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~ 407 (445)
+++..+. ..+......-|+ +++..+.+|.
T Consensus 258 pVia~GG-I~~~~d~~~ala--~GAd~V~iG~ 286 (404)
T 1eep_A 258 CIIADGG-IRFSGDVVKAIA--AGADSVMIGN 286 (404)
T ss_dssp EEEEESC-CCSHHHHHHHHH--HTCSEEEECH
T ss_pred eEEEECC-CCCHHHHHHHHH--cCCCHHhhCH
Confidence 9866553 233333223333 3466555544
No 220
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=29.40 E-value=1.4e+02 Score=29.06 Aligned_cols=91 Identities=20% Similarity=0.192 Sum_probs=57.0
Q ss_pred HHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHH
Q 043137 283 ALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTE 362 (445)
Q Consensus 283 ~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~ 362 (445)
+-++.+.+.++++++.++=+|+.+++.+-..++ .+ -+.|.+.+ +++. ++.+.+. +.--.|.+|-+..+++.+
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd-~lkIgs~~--~~n~-~LL~~~a-~~gkPVilk~G~~~t~~e 264 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADIEVALDY---VD-VIQIGARN--MQNF-ELLKAAG-RVDKPILLKRGLSATIEE 264 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT---CS-EEEECGGG--TTCH-HHHHHHH-TSSSCEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh---CC-EEEECccc--ccCH-HHHHHHH-ccCCcEEEecCCCCCHHH
Confidence 445566788888999999999998887766543 22 13333333 2443 3333332 234467777777777777
Q ss_pred HHHHHHHHHHcCC-cEEecC
Q 043137 363 SIEAVRMSKQAGW-GVMASH 381 (445)
Q Consensus 363 a~~ia~~A~~~g~-~~~~~~ 381 (445)
+..++..+++.|- ++++-|
T Consensus 265 ~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 265 FIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp HHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 7777777777654 455555
No 221
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=29.19 E-value=3.7e+02 Score=25.37 Aligned_cols=110 Identities=15% Similarity=0.251 Sum_probs=55.1
Q ss_pred EeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhcc-CCeeeE--E-----CCCCcC-CHHHH----HHHH
Q 043137 250 MDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISD-YPIVSI--E-----DPFDQD-DWEHY----AKLT 316 (445)
Q Consensus 250 vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~-~~i~~i--E-----dP~~~~-D~~~~----~~L~ 316 (445)
+++-.+.||+.+ ...+.+.+++...+++++ .++.=| | +|++.+ +++-. +.|+
T Consensus 48 lNvTPDSFsdgg---------------~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~ 112 (318)
T 2vp8_A 48 VNRTPDSFYDKG---------------ATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLR 112 (318)
T ss_dssp EC-----------------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHH
T ss_pred EeCCCCcccCCC---------------ccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 566666666544 334556777765666553 222212 3 455432 22222 4445
Q ss_pred HHh-CCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCC
Q 043137 317 SEV-GEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGE 385 (445)
Q Consensus 317 ~~~-~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~e 385 (445)
+.+ + +||+-|-. +++-++..++.+ +++|| |++ |+ . --+++.++.++|..+++-|+.+.
T Consensus 113 ~~~~~--vpISIDT~---~~~VaeaAl~aG-a~iIN-DVs--g~-~-d~~m~~vaa~~g~~vVlmh~~G~ 171 (318)
T 2vp8_A 113 GAYPD--QLISVDTW---RAQVAKAACAAG-ADLIN-DTW--GG-V-DPAMPEVAAEFGAGLVCAHTGGA 171 (318)
T ss_dssp HHSTT--CEEEEECS---CHHHHHHHHHHT-CCEEE-ETT--SS-S-STTHHHHHHHHTCEEEEECC---
T ss_pred hhCCC--CeEEEeCC---CHHHHHHHHHhC-CCEEE-ECC--CC-C-chHHHHHHHHhCCCEEEECCCCC
Confidence 554 5 99999853 478888888885 55654 333 22 1 34778889999999999997543
No 222
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=29.11 E-value=2.5e+02 Score=24.79 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=30.5
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++..++.+++|++.++ +||+.+-- +++++++.++++.+ +|.+.+
T Consensus 175 ~~~~~~~~i~~l~~~~~--~pi~~~GG-I~~~e~i~~~~~~G-ad~viv 219 (248)
T 1geq_A 175 IPKTAYDLLRRAKRICR--NKVAVGFG-VSKREHVVSLLKEG-ANGVVV 219 (248)
T ss_dssp CCHHHHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEE
T ss_pred CChhHHHHHHHHHhhcC--CCEEEEee-cCCHHHHHHHHHcC-CCEEEE
Confidence 33445678888888876 88744332 46679999988776 566553
No 223
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=29.05 E-value=1.6e+02 Score=26.34 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=40.2
Q ss_pred ceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccH-------HHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 323 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSV-------TESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 323 vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGi-------t~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
+.|+-|+.- +....+..+. .-..|+|-||.+-+-.+ .-...++.+|+..|+++++.+ .||..
T Consensus 153 ~~ialDdfG-~g~ssl~~L~-~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG--VEt~~ 221 (259)
T 3s83_A 153 AGLALDDFG-TGFSSLSYLT-RLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG--VENAE 221 (259)
T ss_dssp CEEEEECC----CHHHHHHH-HSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC--CCSHH
T ss_pred CEEEEECCC-CCchhHHHHH-hCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe--CCCHH
Confidence 999999863 4445555443 44689999996433222 225668889999999986655 56643
No 224
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=28.63 E-value=79 Score=30.55 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=22.8
Q ss_pred HHHHHHHhhccCCeeeEECCCCcCCHHHHHH
Q 043137 284 LKDLYKSFISDYPIVSIEDPFDQDDWEHYAK 314 (445)
Q Consensus 284 ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~ 314 (445)
..+.+.+.+++.++.|+=+||+.++.+-+.+
T Consensus 79 ~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~ 109 (350)
T 3g8r_A 79 QMQKLVAEMKANGFKAICTPFDEESVDLIEA 109 (350)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEeccCCHHHHHHHHH
Confidence 3445577888999999999998766555443
No 225
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=28.60 E-value=62 Score=25.50 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=19.1
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDG 31 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G 31 (445)
.|+||+|+.+.+. ..|+---++.|+.|+-
T Consensus 3 ~M~iTdVri~~i~-~~gklkA~aSVt~dd~ 31 (105)
T 2i9z_A 3 AMKVTDVRLRKIQ-TDGRMKALVSITLDEA 31 (105)
T ss_dssp -CCEEEEEEEECC-SCSSEEEEEEEEETTT
T ss_pred ccEEEEEEEEEeC-CCCCEEEEEEEEECCE
Confidence 4999999999984 3344334566666654
No 226
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=28.07 E-value=2.8e+02 Score=23.62 Aligned_cols=94 Identities=11% Similarity=0.026 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCC---cCCHHHHHHHHHHhCCCceEEeCcccccC-HHHHHHHHhcCCCCEEEeccC
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFD---QDDWEHYAKLTSEVGEKVQIVGDDLLVTN-PKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~---~~D~~~~~~L~~~~~~~vpI~gde~~~~~-~~~~~~~i~~~a~d~v~ik~~ 355 (445)
+.+++++.+.+ +.+ ++.|||=-++ .+-.+..++|++.++ ..||..|=- +.+ +..+.+.+..-.+|++.+.+.
T Consensus 11 ~~~~~~~~~~~-~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~-~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~ 86 (207)
T 3ajx_A 11 STEAALELAGK-VAE-YVDIIELGTPLIKAEGLSVITAVKKAHP-DKIVFADMK-TMDAGELEADIAFKAGADLVTVLGS 86 (207)
T ss_dssp CHHHHHHHHHH-HGG-GCSEEEECHHHHHHHCTHHHHHHHHHST-TSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETT
T ss_pred CHHHHHHHHHH-hhc-cCCEEEECcHHHHhhCHHHHHHHHHhCC-CCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEecc
Confidence 45677777544 455 5677775432 234566788888872 278876533 334 666455555556899987765
Q ss_pred CcccHHHHHHHHHHHHHcCCcEEe
Q 043137 356 QIGSVTESIEAVRMSKQAGWGVMA 379 (445)
Q Consensus 356 ~~GGit~a~~ia~~A~~~g~~~~~ 379 (445)
.. -....++.+.++++|+.+.+
T Consensus 87 ~~--~~~~~~~~~~~~~~g~~~gv 108 (207)
T 3ajx_A 87 AD--DSTIAGAVKAAQAHNKGVVV 108 (207)
T ss_dssp SC--HHHHHHHHHHHHHHTCEEEE
T ss_pred CC--hHHHHHHHHHHHHcCCceEE
Confidence 42 23455666778888888644
No 227
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=27.52 E-value=3.6e+02 Score=25.16 Aligned_cols=111 Identities=11% Similarity=0.085 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCC--eeeEECC
Q 043137 226 NKEGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYP--IVSIEDP 303 (445)
Q Consensus 226 ~~~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~--i~~iEdP 303 (445)
.+|+.+.++.+++.++ +++.+.+-+. . +..+++++ .+..++.+ -..+--|
T Consensus 64 ~eEr~~v~~~~v~~~~--grvpViaGvg------------------------~-~t~~ai~l-a~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 64 LEEAKEEVRRTVEYVH--GRALVVAGIG------------------------Y-ATSTAIEL-GNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHHHHHHHHHT--TSSEEEEEEC------------------------S-SHHHHHHH-HHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHhC--CCCcEEEEeC------------------------c-CHHHHHHH-HHHHHhcCCCEEEEcCC
Confidence 5778887877777664 5677766652 1 45677776 34455544 3334455
Q ss_pred CC----cCC-HHHHHHHHHHhCCCceEEeCcc-cccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHH
Q 043137 304 FD----QDD-WEHYAKLTSEVGEKVQIVGDDL-LVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRM 369 (445)
Q Consensus 304 ~~----~~D-~~~~~~L~~~~~~~vpI~gde~-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~ 369 (445)
.. .+. ++-|+.+.+.++ +||+.-.. ..-+++-+.++. ..-+++-+|-+ +|-+....++.+.
T Consensus 116 ~y~~~s~~~l~~~f~~va~a~~--lPiilYn~g~~l~~~~~~~La--~~pnIvgiKds-sgd~~~~~~~~~~ 182 (316)
T 3e96_A 116 IHPYVTAGGVYAYFRDIIEALD--FPSLVYFKDPEISDRVLVDLA--PLQNLVGVKYA-INDLPRFAKVVRS 182 (316)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHT--SCEEEEECCTTSCTHHHHHHT--TCTTEEEEEEC-CCCHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCC--CCEEEEeCCCCCCHHHHHHHH--cCCCEEEEEeC-CCCHHHHHHHHHh
Confidence 42 122 245688888888 88865541 111467777876 45689999976 4666666555543
No 228
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=27.33 E-value=1.8e+02 Score=25.70 Aligned_cols=41 Identities=10% Similarity=0.211 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
+..+++++.++ +|+..+-. +.+++++..+++.+ +|.|.+..
T Consensus 65 ~~i~~i~~~~~--ipv~v~gg-I~~~~~~~~~l~~G-ad~V~lg~ 105 (244)
T 1vzw_A 65 ALIAEVAQAMD--IKVELSGG-IRDDDTLAAALATG-CTRVNLGT 105 (244)
T ss_dssp HHHHHHHHHCS--SEEEEESS-CCSHHHHHHHHHTT-CSEEEECH
T ss_pred HHHHHHHHhcC--CcEEEECC-cCCHHHHHHHHHcC-CCEEEECc
Confidence 77888998887 99854433 46789999999876 78887654
No 229
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=27.28 E-value=1.2e+02 Score=29.33 Aligned_cols=96 Identities=13% Similarity=0.199 Sum_probs=62.7
Q ss_pred HHHHHHHHHhhccCCeeeEECCCCcCCHHHHHHH-HHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc--CCcc
Q 043137 282 DALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKL-TSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV--NQIG 358 (445)
Q Consensus 282 ~~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L-~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~--~~~G 358 (445)
.+++..+..++.+-+-..+.+|.....+..+..+ .++.+ +.+.-=+. .+++++++.++.+ ..+|.+.. +-.|
T Consensus 92 ~~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~i~~~-~~~v~~e~~~np~G 166 (400)
T 3nmy_A 92 MAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG--LDFSFVDL--TDPAAFKAAIRAD-TKMVWIETPTNPML 166 (400)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC--CEEEEECT--TSHHHHHHHCCTT-EEEEEEESSCTTTC
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC--eEEEEECC--CCHHHHHHHhccC-CCEEEEECCCCCCC
Confidence 3455544455555556778889887556666665 55666 54422121 3578888887653 34555443 3457
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCC
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHR 382 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~ 382 (445)
.+.+..+++++|+++|+.+++...
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECT
T ss_pred eeecHHHHHHHHHHcCCEEEEECC
Confidence 788899999999999999877653
No 230
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=27.06 E-value=3.5e+02 Score=25.20 Aligned_cols=87 Identities=8% Similarity=0.148 Sum_probs=55.2
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCC--C-----cCCHHHHHHHHHHhCCCceE--EeCcccccCHHHHHHHHhcCCCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPF--D-----QDDWEHYAKLTSEVGEKVQI--VGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~--~-----~~D~~~~~~L~~~~~~~vpI--~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.++.++.++ ..++..+.+..||--.- . .+|.+-++++.+..+.+++| +|+ +.+.+++.++++.++.
T Consensus 184 ~Lt~eei~~-A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGG---Irt~edAl~mi~aGA~- 258 (288)
T 3oa3_A 184 QLTADEIIA-GCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGG---IRTIEDCVKMVRAGAE- 258 (288)
T ss_dssp GCCHHHHHH-HHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESS---CCSHHHHHHHHHTTCS-
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCC---CCCHHHHHHHHHcCCc-
Confidence 345566554 46667778888887662 1 23666666666543445887 444 3568999999998874
Q ss_pred EEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 349 ALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 349 ~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
|+| .|...+|.+-++..|+..
T Consensus 259 -------RiG-tS~g~~I~~~~~~~~~~~ 279 (288)
T 3oa3_A 259 -------RLG-ASAGVKIVNETRLGNRQV 279 (288)
T ss_dssp -------EEE-ESCHHHHHHHHTC-----
T ss_pred -------eee-hhhHHHHHHHHHhcCCCC
Confidence 665 488888888877777653
No 231
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=27.00 E-value=4.3e+02 Score=25.42 Aligned_cols=123 Identities=13% Similarity=0.077 Sum_probs=74.6
Q ss_pred CccCHHHHHHHHHHhhccCCeeeEECCCCc---CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 277 QKISGDALKDLYKSFISDYPIVSIEDPFDQ---DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 277 ~~~t~~~ai~~~~~~l~~~~i~~iEdP~~~---~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
..++.++.+++ .+.|++.++.+||=-+|. .+.+..+.+++.. .+.++++-- ...++++++.++.+ +|.+.+=
T Consensus 20 ~~~~~~~k~~i-a~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~-~~~~v~~~~--r~~~~di~~a~~~g-~~~v~i~ 94 (382)
T 2ztj_A 20 ANFSTQDKVEI-AKALDEFGIEYIEVTTPVASPQSRKDAEVLASLG-LKAKVVTHI--QCRLDAAKVAVETG-VQGIDLL 94 (382)
T ss_dssp CCCCHHHHHHH-HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC-CSSEEEEEE--ESCHHHHHHHHHTT-CSEEEEE
T ss_pred CCcCHHHHHHH-HHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcC-CCcEEEEEc--ccChhhHHHHHHcC-CCEEEEE
Confidence 45788898887 566788999999986653 4555566665432 236664421 12478888888764 5666642
Q ss_pred cC------------CcccHHHHHHHHHHHHHcC--CcEEecCCC-CCChhhHHHHH---HhhhcCCcccc
Q 043137 354 VN------------QIGSVTESIEAVRMSKQAG--WGVMASHRS-GETEDTFIADL---SVGLATGQIKT 405 (445)
Q Consensus 354 ~~------------~~GGit~a~~ia~~A~~~g--~~~~~~~~~-~et~~~~~~~l---a~a~~~~~~~~ 405 (445)
.+ +-.-+..+.++++.|+++| +.+.++... ..+.....+.+ +... +..+.+
T Consensus 95 ~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 95 FGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp ECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred eccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 21 1112455788899999999 888776532 22333444443 3333 555554
No 232
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=26.69 E-value=2.5e+02 Score=24.87 Aligned_cols=62 Identities=11% Similarity=0.005 Sum_probs=41.7
Q ss_pred ceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc-------cHHHHHHHHHHHHHcCCcEEecCCCCCChh
Q 043137 323 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG-------SVTESIEAVRMSKQAGWGVMASHRSGETED 388 (445)
Q Consensus 323 vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G-------Git~a~~ia~~A~~~g~~~~~~~~~~et~~ 388 (445)
+.|+-|+.- +....+..+ ..-..|+|-||-+-+. .-.-...++.+|+..|+.+++.+ .||..
T Consensus 157 ~~ialDdfG-~g~s~l~~L-~~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG--VEt~~ 225 (250)
T 4f3h_A 157 CKVGLEQFG-SGLDSFQLL-AHFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF--VADAQ 225 (250)
T ss_dssp CEEEEEEET-SSTHHHHHH-TTSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC--CCCHH
T ss_pred CEEEEeCCC-CCchHHHHH-hhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec--cCCHH
Confidence 999999863 445555544 3445899999943222 23346677889999999986654 56643
No 233
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=26.65 E-value=3.5e+02 Score=24.22 Aligned_cols=81 Identities=12% Similarity=0.174 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHhhc--cCCeeeEECCCCcCCHHHHHHHHHHh-CCCceE-EeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 280 SGDALKDLYKSFIS--DYPIVSIEDPFDQDDWEHYAKLTSEV-GEKVQI-VGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 280 t~~~ai~~~~~~l~--~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI-~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
+.+++..+ +...+ .+++.|+|--=...+.+-.+++++.+ . +|+ +|.- +++++++++++ . .+|.+.+--.
T Consensus 138 ~~e~~~~~-a~~a~~~g~~~VYld~sG~~~~~~~i~~i~~~~~~--~Pv~vGGG--I~t~e~a~~~~-~-gAD~VVVGSa 210 (228)
T 3vzx_A 138 NMDDIVAY-ARVSELLQLPIFYLEYSGVLGDIEAVKKTKAVLET--STLFYGGG--IKDAETAKQYA-E-HADVIVVGNA 210 (228)
T ss_dssp CHHHHHHH-HHHHHHTTCSEEEEECTTSCCCHHHHHHHHHHCSS--SEEEEESS--CCSHHHHHHHH-T-TCSEEEECTH
T ss_pred CHHHHHHH-HHHHHHcCCCEEEecCCCCcCCHHHHHHHHHhcCC--CCEEEeCC--CCCHHHHHHHH-h-CCCEEEEChH
Confidence 45665544 44333 25788999722234889999999998 6 887 6665 46799999987 3 6888887543
Q ss_pred CcccHHHHHHHH
Q 043137 356 QIGSVTESIEAV 367 (445)
Q Consensus 356 ~~GGit~a~~ia 367 (445)
-.-...-+++++
T Consensus 211 ~v~~p~~~~~~v 222 (228)
T 3vzx_A 211 VYEDFDRALKTV 222 (228)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhcCHHHHHHHH
Confidence 322333334433
No 234
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=26.28 E-value=1.8e+02 Score=27.01 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=55.9
Q ss_pred HHHHHHHHHhh-ccCCeeeEECCCCcCCHHHHHHHHHHhCCC-ceEEeCcccccCHHHHHHHHhcCCCCEEEeccCC-cc
Q 043137 282 DALKDLYKSFI-SDYPIVSIEDPFDQDDWEHYAKLTSEVGEK-VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ-IG 358 (445)
Q Consensus 282 ~~ai~~~~~~l-~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~-vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~-~G 358 (445)
.+++....+.+ .+-+-..+++|... ++....+..+.+ +++--++. -+++++++.++.+..=++...++. .|
T Consensus 91 ~~a~~~~~~~~~~~gd~vl~~~~~~~----~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~nptG 164 (377)
T 3fdb_A 91 VRGLYIAIDHFTPAQSKVIVPTPAYP----PFFHLLSATQREGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPLG 164 (377)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEESCCT----HHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTTT
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcH----hHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCCC
Confidence 45555444444 33456778888764 344444444421 23323322 358999999887644344444433 33
Q ss_pred cH---HHHHHHHHHHHHcCCcEEecC
Q 043137 359 SV---TESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 359 Gi---t~a~~ia~~A~~~g~~~~~~~ 381 (445)
.+ .+..+++++|+++|+.+++..
T Consensus 165 ~~~~~~~l~~l~~~~~~~~~~li~De 190 (377)
T 3fdb_A 165 MVFAPEWLNELCDLAHRYDARVLVDE 190 (377)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 33 478999999999999987655
No 235
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=26.18 E-value=3.1e+02 Score=24.10 Aligned_cols=62 Identities=5% Similarity=0.076 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCcEEecCCCCC-C--hhhHHHHHHhhhcCCccccCCCCCchhHHHHHHHHHHHHHh
Q 043137 361 TESIEAVRMSKQAGWGVMASHRSGE-T--EDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEEL 427 (445)
Q Consensus 361 t~a~~ia~~A~~~g~~~~~~~~~~e-t--~~~~~~~la~a~~~~~~~~G~~~~~e~~~k~n~ll~i~~~l 427 (445)
.+..++.+.++++|+.+...|.... + ......++|..++++.+.+.. + .+ .++++.++.++.
T Consensus 63 ~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~-~-~~---~~~~l~~~a~~~ 127 (262)
T 3p6l_A 63 QTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEP-A-LS---DWDLVEKLSKQY 127 (262)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECC-C-GG---GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecC-C-HH---HHHHHHHHHHHh
Confidence 3456666667777776544332111 1 223455666666666666532 1 12 245555555544
No 236
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=26.11 E-value=3.4e+02 Score=23.98 Aligned_cols=109 Identities=9% Similarity=0.159 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcC-CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQD-DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+.+++++.... +-+.++.+||=.+... ..+.+++|+++.+ ++-+-.+-. . +.+++...++.+ +|++.. |
T Consensus 27 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~l~vgaGtv-l-~~d~~~~A~~aG-Ad~v~~-----p 96 (224)
T 1vhc_A 27 NADDILPLADT-LAKNGLSVAEITFRSEAAADAIRLLRANRP-DFLIAAGTV-L-TAEQVVLAKSSG-ADFVVT-----P 96 (224)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEETTSTTHHHHHHHHHHHCT-TCEEEEESC-C-SHHHHHHHHHHT-CSEEEC-----S
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeccCchHHHHHHHHHHhCc-CcEEeeCcE-e-eHHHHHHHHHCC-CCEEEE-----C
Confidence 45567766444 4568899999887644 3566777888886 355544433 3 468888888777 477632 2
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+ .-..+++.|+++|.++++|..+ .+ -+.-|...++.++++
T Consensus 97 ~--~d~~v~~~ar~~g~~~i~Gv~t-~~----e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 97 G--LNPKIVKLCQDLNFPITPGVNN-PM----AIEIALEMGISAVKF 136 (224)
T ss_dssp S--CCHHHHHHHHHTTCCEECEECS-HH----HHHHHHHTTCCEEEE
T ss_pred C--CCHHHHHHHHHhCCCEEeccCC-HH----HHHHHHHCCCCEEEE
Confidence 1 1255677888899998776421 11 123344557788776
No 237
>2ia9_A Putative septation protein spovg; APC85465, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2; 3.00A {Bacillus subtilis} SCOP: d.366.1.1
Probab=26.06 E-value=68 Score=25.05 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=19.7
Q ss_pred ceEEEEEEEEEEecCCCCceEEEEEEeCCC
Q 043137 2 AITITAVKARQIFDSRGNPTVEVDVTTSDG 31 (445)
Q Consensus 2 ~mkI~~v~~~~v~~~~g~~~v~V~v~td~G 31 (445)
.|+||+|+.+.+... |+---++.|+.|+-
T Consensus 3 ~M~ITdVri~~i~~~-gklkA~aSVt~dd~ 31 (100)
T 2ia9_A 3 AMEVTDVRLRRVNTD-GRMRAIASITLDHE 31 (100)
T ss_dssp CCCEEEEEEEECCSS-SSEEEEEEEEETTT
T ss_pred ccEEEEEEEEEcCCC-CCEEEEEEEEECCE
Confidence 499999999998543 43234566666653
No 238
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=25.90 E-value=1.3e+02 Score=26.49 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=58.8
Q ss_pred HHHHHHHHhhccCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEe----C----ccccc-CHHHHHHHHhcCCCCEEEec
Q 043137 283 ALKDLYKSFISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVG----D----DLLVT-NPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 283 ~ai~~~~~~l~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~g----d----e~~~~-~~~~~~~~i~~~a~d~v~ik 353 (445)
++.++ .+.+.+.+..+|+= +..+..+.+++.++ +|+++ + ...++ ..+++..+++. .+|.|.+.
T Consensus 37 ~~~~~-a~~~~~~G~~~i~~----~~~~~i~~i~~~~~--~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~-Gad~V~l~ 108 (234)
T 1yxy_A 37 IMPLM-AKAAQEAGAVGIRA----NSVRDIKEIQAITD--LPIIGIIKKDYPPQEPFITATMTEVDQLAAL-NIAVIAMD 108 (234)
T ss_dssp SHHHH-HHHHHHHTCSEEEE----ESHHHHHHHHTTCC--SCEEEECBCCCTTSCCCBSCSHHHHHHHHTT-TCSEEEEE
T ss_pred hHHHH-HHHHHHCCCcEeec----CCHHHHHHHHHhCC--CCEEeeEcCCCCccccccCChHHHHHHHHHc-CCCEEEEc
Confidence 33443 34456677777762 24567888888777 88852 1 22222 34566666554 46899887
Q ss_pred cCCcccH--HHHHHHHHHHHHc--CCcEEecCCCCCChhhHHHHHHhhhcCCcc
Q 043137 354 VNQIGSV--TESIEAVRMSKQA--GWGVMASHRSGETEDTFIADLSVGLATGQI 403 (445)
Q Consensus 354 ~~~~GGi--t~a~~ia~~A~~~--g~~~~~~~~~~et~~~~~~~la~a~~~~~~ 403 (445)
....+.. ....++++.+++. ++.++++.. +... +..+...++.++
T Consensus 109 ~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t~~e--a~~a~~~Gad~i 157 (234)
T 1yxy_A 109 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS---TFDE--GLVAHQAGIDFV 157 (234)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS---SHHH--HHHHHHTTCSEE
T ss_pred ccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC---CHHH--HHHHHHcCCCEE
Confidence 7654321 1234555666655 677655432 2111 333444466666
No 239
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=25.34 E-value=3.6e+02 Score=26.95 Aligned_cols=125 Identities=11% Similarity=0.049 Sum_probs=75.2
Q ss_pred ccCHHHHHHHHH-HhhccCCeeeEECCCC--cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 278 KISGDALKDLYK-SFISDYPIVSIEDPFD--QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 278 ~~t~~~ai~~~~-~~l~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
.+|..+.-++ . .+.-+.++.||=-||- ++|....+++-+..+.+++|++-=......+.+...++ ++|.+.+--
T Consensus 178 ~lTekD~~dl-~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~--~sDgImVaR 254 (461)
T 3qtg_A 178 TPAEEDVEAL-KAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQ--CSDYVVVAR 254 (461)
T ss_dssp SSCHHHHHHH-HHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHH--TCSEEEEEH
T ss_pred CCCHHHHHHH-HHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHH--hcccEEEcc
Confidence 3566655443 2 0344577888888885 46777776666665545777554211122333444554 489998743
Q ss_pred CCc-------ccHHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHhhh--cCCcccc
Q 043137 355 NQI-------GSVTESIEAVRMSKQAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 355 ~~~-------GGit~a~~ia~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
+-. --..--++++..|+++|.++++..++.||.. +=..|+|-|. ++..+.+
T Consensus 255 GDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavML 321 (461)
T 3qtg_A 255 GDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWL 321 (461)
T ss_dssp HHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEE
Confidence 221 1234457788999999999999888887643 2345666543 5665554
No 240
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=25.09 E-value=2.3e+02 Score=28.72 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=72.5
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC--cCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD--QDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~--~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+|.++.-++ .++.-+.++.||=-||- ++|+...+++-+..+.+++|++-=......+.+...++ ++|.+.+--+
T Consensus 204 ~lTekD~~Dl-~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~--~sDgimVaRG 280 (511)
T 3gg8_A 204 VIGEKDKHDI-LNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILA--EADGIMIARG 280 (511)
T ss_dssp SSCHHHHHHH-HHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHH--HCSCEEEEHH
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHH--hCCeEEEecc
Confidence 3566664443 13445678899999985 45555555555443334777554211111223334444 3688887322
Q ss_pred Ccc---cH----HHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHhhh--cCCcccc
Q 043137 356 QIG---SV----TESIEAVRMSKQAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 356 ~~G---Gi----t~a~~ia~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
-.| ++ .--++++..|+++|.++++..++.||.. +=..|+|-|. ++..+.+
T Consensus 281 DLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavML 346 (511)
T 3gg8_A 281 DLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVML 346 (511)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred hhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEe
Confidence 111 22 2347788899999999999888888743 2345666664 5666554
No 241
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=24.79 E-value=96 Score=28.65 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=42.8
Q ss_pred HHhhccCCeeeEECCCCc--------CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 289 KSFISDYPIVSIEDPFDQ--------DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 289 ~~~l~~~~i~~iEdP~~~--------~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
++.+++.+...++ |+.. -|++-++.+++..+ +||+.+-- +.+++++...++.+ +|.|++-
T Consensus 149 akrl~~~G~~aVm-Plg~pIGsG~Gi~~~~lI~~I~e~~~--vPVI~eGG-I~TPsDAa~AmeLG-AdgVlVg 216 (265)
T 1wv2_A 149 ARQLAEIGCIAVM-PLAGLIGSGLGICNPYNLRIILEEAK--VPVLVDAG-VGTASDAAIAMELG-CEAVLMN 216 (265)
T ss_dssp HHHHHHSCCSEEE-ECSSSTTCCCCCSCHHHHHHHHHHCS--SCBEEESC-CCSHHHHHHHHHHT-CSEEEES
T ss_pred HHHHHHhCCCEEE-eCCccCCCCCCcCCHHHHHHHHhcCC--CCEEEeCC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 4456777877774 5332 47889999999877 88755533 56799999999985 5665544
No 242
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=24.63 E-value=52 Score=29.57 Aligned_cols=66 Identities=15% Similarity=0.005 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
|++.++++++.++ +||+++-- +++++++.++++.+ +|.+.+=-.-.++-....++.+..+..|+++
T Consensus 183 ~~~~~~~l~~~~~--ipvia~GG-I~~~~d~~~~~~~G-adgv~vGsal~~~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 183 DTEMIRFVRPLTT--LPIIASGG-AGKMEHFLEAFLAG-ADAALAASVFHFREIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp CHHHHHHHGGGCC--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTCSCHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHHcC-ChHHHHHHHHHcCCCCHHHHHHHHHHcCCcc
Confidence 7889999998876 88855432 56789999998754 6666654222222112444455567778764
No 243
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=24.49 E-value=1.6e+02 Score=28.79 Aligned_cols=101 Identities=11% Similarity=-0.011 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhh-ccCC---eeeEECCCCcCCHHHHHHHHHHhCCCc-----eEE-eCcccccCHHHHHHHHhc--CCCC
Q 043137 281 GDALKDLYKSFI-SDYP---IVSIEDPFDQDDWEHYAKLTSEVGEKV-----QIV-GDDLLVTNPKRVEKAIKE--KTCN 348 (445)
Q Consensus 281 ~~~ai~~~~~~l-~~~~---i~~iEdP~~~~D~~~~~~L~~~~~~~v-----pI~-gde~~~~~~~~~~~~i~~--~a~d 348 (445)
..+++..+...+ .+.+ -..+++|-.+.+...+..+.+..+-.+ ++. -++...-+++++.+.++. ....
T Consensus 137 ~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 216 (465)
T 3e9k_A 137 LTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIA 216 (465)
T ss_dssp HHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeE
Confidence 345555444444 3222 378899998887777777666655221 221 122222368999998863 2344
Q ss_pred EEEecc--CCcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 349 ALLLKV--NQIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 349 ~v~ik~--~~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
+|.+-. +-.|.+.+..++.++|+++|+.+++..
T Consensus 217 lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~ 251 (465)
T 3e9k_A 217 VILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDL 251 (465)
T ss_dssp EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEh
Confidence 444443 346888899999999999999987663
No 244
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=24.25 E-value=3.6e+02 Score=25.58 Aligned_cols=126 Identities=17% Similarity=0.195 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEE---ecccccccc--------------CCc-eeeecccCCCCCCCCccCHHHHHHHH
Q 043137 227 KEGLELLNTAIAKAGYTGKVVIGM---DVAASEFYG--------------SDK-TYDLNFKEENNDGSQKISGDALKDLY 288 (445)
Q Consensus 227 ~~~l~~l~~av~~~g~~~~i~l~v---D~~a~~~~~--------------~~~-~y~~~~~~~~~~~~~~~t~~~ai~~~ 288 (445)
.-++.++|+++.+.|+. ++.||- -. ++.||. .++ .|+.+.. +..|+++..
T Consensus 179 DGrV~aIR~aLd~~G~~-~v~ImsYsaKy-ASafYGPFRdAa~Sap~f~~GDrktYQmdpa----------N~~EAlrE~ 246 (337)
T 1w5q_A 179 DGRIGAIREALESAGHT-NVRVMAYSAKY-ASAYYGPFRDAVGSASNLGKGNRATYQMDPA----------NSDEALHEV 246 (337)
T ss_dssp TTHHHHHHHHHHHTTCT-TCEEEEEEEEB-CCGGGHHHHHC----------CGGGTSBCTT----------CSHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCC-CceeehhHHHH-HHHHHHHHHHHhcCCcccCCCCccccCCCCC----------ChHHHHHHH
Confidence 35788999999999984 777773 22 233441 122 5666522 345666554
Q ss_pred HHhhc-cCCeeeEECCCCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHH
Q 043137 289 KSFIS-DYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAV 367 (445)
Q Consensus 289 ~~~l~-~~~i~~iEdP~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia 367 (445)
..-++ -.++.++.=-++. ++-.+++++++. +|+++-..+ .-..=++...++++.| + + .+.|++..
T Consensus 247 ~~Di~EGAD~vMVKPal~Y--LDIir~vk~~~~--~PvaaYqVS-GEYAMikaAa~~GwiD----~--~--~v~Esl~~- 312 (337)
T 1w5q_A 247 AADLAEGADMVMVKPGMPY--LDIVRRVKDEFR--APTFVYQVS-GEYAMHMGAIQNGWLA----E--S--VILESLTA- 312 (337)
T ss_dssp HHHHHTTCSEEEEESCGGG--HHHHHHHHHHHC--SCEEEEECH-HHHHHHHHHHHTTSSC----T--T--HHHHHHHH-
T ss_pred HhhHHhCCCEEEEcCCCch--HHHHHHHHHhcC--CCEEEEEcC-cHHHHHHHHHHcCCcc----H--H--HHHHHHHH-
Confidence 33333 3668888855664 567899999998 999887643 2233345566677766 1 1 24444433
Q ss_pred HHHHHcCCcEEec
Q 043137 368 RMSKQAGWGVMAS 380 (445)
Q Consensus 368 ~~A~~~g~~~~~~ 380 (445)
.+.+|-.+++.
T Consensus 313 --~kRAGAd~IiT 323 (337)
T 1w5q_A 313 --FKRAGADGILT 323 (337)
T ss_dssp --HHHHTCSEEEE
T ss_pred --HHhcCCCEEee
Confidence 34566666553
No 245
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=24.15 E-value=3.2e+02 Score=24.24 Aligned_cols=109 Identities=6% Similarity=0.085 Sum_probs=67.8
Q ss_pred CHHHHHHHHHHhhccCCeeeEECCCCcC-CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcc
Q 043137 280 SGDALKDLYKSFISDYPIVSIEDPFDQD-DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG 358 (445)
Q Consensus 280 t~~~ai~~~~~~l~~~~i~~iEdP~~~~-D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G 358 (445)
+.+++++.... +-+.++.+||=.+... ..+.+++|+++.+ ++-+-.+-. . +.+++...++.++ |++. .|
T Consensus 36 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~igagtv-l-~~d~~~~A~~aGA-d~v~-----~p 105 (225)
T 1mxs_A 36 REEDILPLADA-LAAGGIRTLEVTLRSQHGLKAIQVLREQRP-ELCVGAGTV-L-DRSMFAAVEAAGA-QFVV-----TP 105 (225)
T ss_dssp CGGGHHHHHHH-HHHTTCCEEEEESSSTHHHHHHHHHHHHCT-TSEEEEECC-C-SHHHHHHHHHHTC-SSEE-----CS
T ss_pred CHHHHHHHHHH-HHHCCCCEEEEecCCccHHHHHHHHHHhCc-ccEEeeCeE-e-eHHHHHHHHHCCC-CEEE-----eC
Confidence 34566666444 4468899999887543 3455677888875 355644433 3 4688888888775 5553 23
Q ss_pred cHHHHHHHHHHHHHcCCcEEecCCCCCChhhHHHHHHhhhcCCcccc
Q 043137 359 SVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKT 405 (445)
Q Consensus 359 Git~a~~ia~~A~~~g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~ 405 (445)
+. -..+...|+.+|+++++|..+. ++ +.-|...++.++++
T Consensus 106 ~~--d~~v~~~~~~~g~~~i~G~~t~-~e----~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 106 GI--TEDILEAGVDSEIPLLPGISTP-SE----IMMGYALGYRRFKL 145 (225)
T ss_dssp SC--CHHHHHHHHHCSSCEECEECSH-HH----HHHHHTTTCCEEEE
T ss_pred CC--CHHHHHHHHHhCCCEEEeeCCH-HH----HHHHHHCCCCEEEE
Confidence 22 3567788889999987764321 11 23344556777776
No 246
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=24.15 E-value=1.7e+02 Score=29.49 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC-------C------cccHHHHHHHHHHHHHc-
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-------Q------IGSVTESIEAVRMSKQA- 373 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-------~------~GGit~a~~ia~~A~~~- 373 (445)
-++..++|++.++.++||+.... .+.++++.+++.+ +|++.+-.. + ...++-..++++.++.+
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V--~t~~~a~~l~~aG-ad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~ 346 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNI--VDGEGFRYLADAG-ADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYF 346 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEE--CSHHHHHHHHHHT-CSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccc--cCHHHHHHHHHhC-CCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHh
Confidence 35567888888752267655443 4588888888776 677766331 1 23346666777777776
Q ss_pred -----CCcEEecCCCCCChhhHHHHHHhhhcCCccccCCC
Q 043137 374 -----GWGVMASHRSGETEDTFIADLSVGLATGQIKTGAP 408 (445)
Q Consensus 374 -----g~~~~~~~~~~et~~~~~~~la~a~~~~~~~~G~~ 408 (445)
+++++..+.. -+...... |+++|+..+..|.+
T Consensus 347 ~~~~~~ipvia~GGi-~~~~di~k--AlalGA~~V~iG~~ 383 (503)
T 1me8_A 347 EETGIYIPVCSDGGI-VYDYHMTL--ALAMGADFIMLGRY 383 (503)
T ss_dssp HHHSEECCEEEESCC-CSHHHHHH--HHHTTCSEEEESHH
T ss_pred hhcCCCceEEEeCCC-CCHHHHHH--HHHcCCCEEEECch
Confidence 8998765532 22222222 34446777776654
No 247
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=24.12 E-value=4.3e+02 Score=25.38 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
++..+++++..+ .+||+... +.++++.+.+++.+ +|+|.+-
T Consensus 129 ~e~I~~ir~~~~-~~~Vi~G~--V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 129 GKTLKSLRQLLG-SRCIMAGN--VATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHT-TCEEEEEE--ECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHhcC-CCeEEEcC--cCCHHHHHHHHHcC-CCEEEEc
Confidence 456788888873 38987753 34689888887765 7888874
No 248
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=23.62 E-value=1.6e+02 Score=27.53 Aligned_cols=65 Identities=6% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHHHHhCCCceE--EeCcccccCHHHHHHHHhcCCCCEEEeccCCcc---cHHHHHHHHHHHHHcCCcE--EecCC
Q 043137 313 AKLTSEVGEKVQI--VGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIG---SVTESIEAVRMSKQAGWGV--MASHR 382 (445)
Q Consensus 313 ~~L~~~~~~~vpI--~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~G---Git~a~~ia~~A~~~g~~~--~~~~~ 382 (445)
+.+.++.+ +|| =.|. ..+.+.+.+.++.+ ++.+++|.+..- =|..+++++++|++.|+.+ -+|+-
T Consensus 67 ~~~a~~~~--VPValHlDH--g~~~e~i~~ai~~G-FtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~v 138 (286)
T 1gvf_A 67 SAYSTTYN--MPLALHLDH--HESLDDIRRKVHAG-VRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRL 138 (286)
T ss_dssp HHHHHHTT--SCBEEEEEE--ECCHHHHHHHHHTT-CCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred HHHHHhCC--CcEEEEcCC--CCCHHHHHHHHHcC-CCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 44445555 665 5665 35789999999987 799999998652 3667899999999999876 45553
No 249
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=23.57 E-value=3.9e+02 Score=25.60 Aligned_cols=95 Identities=8% Similarity=0.129 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC----CcccHHHHHHHHHHHHHc--CCcEEec
Q 043137 307 DDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN----QIGSVTESIEAVRMSKQA--GWGVMAS 380 (445)
Q Consensus 307 ~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~----~~GGit~a~~ia~~A~~~--g~~~~~~ 380 (445)
-.++..++|++.++ +||+--+. .++++.+.+.+.+ +|+|.+.-. .-+|...+.-+..+.++. .++++..
T Consensus 216 ~~~~~i~~lr~~~~--~PvivK~v--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~ 290 (368)
T 2nli_A 216 ISPRDIEEIAGHSG--LPVFVKGI--QHPEDADMAIKRG-ASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD 290 (368)
T ss_dssp CCHHHHHHHHHHSS--SCEEEEEE--CSHHHHHHHHHTT-CSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC
T ss_pred hhHHHHHHHHHHcC--CCEEEEcC--CCHHHHHHHHHcC-CCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE
Confidence 46788999999987 88865543 4588888777665 788877431 112344444444444444 5887655
Q ss_pred CCCCCChhhHHHHHHhhhcCCccccCCCC
Q 043137 381 HRSGETEDTFIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 381 ~~~~et~~~~~~~la~a~~~~~~~~G~~~ 409 (445)
+ ...+.....--| ++++..+.+|.|.
T Consensus 291 G-GI~~g~D~~kal--alGAd~V~iGr~~ 316 (368)
T 2nli_A 291 S-GVRRGEHVAKAL--ASGADVVALGRPV 316 (368)
T ss_dssp S-SCCSHHHHHHHH--HTTCSEEEECHHH
T ss_pred C-CCCCHHHHHHHH--HcCCCEEEECHHH
Confidence 5 234433333333 3567777777643
No 250
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=23.57 E-value=84 Score=26.51 Aligned_cols=65 Identities=20% Similarity=0.127 Sum_probs=39.0
Q ss_pred HhHhhhhcCCCCCCHHHH-HHHHHHHhccCCCcccccccccchhhHHHHHHHHHHHHHHhcCCchhhhhc
Q 043137 73 AIIGPALAGKDPTEQTAI-DNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIA 141 (445)
Q Consensus 73 ~~l~p~LiG~d~~~~e~i-~~~l~~~l~~~~~~~~~~~~~~~~~a~sAvdiAlwD~~gk~~g~Pl~~lLG 141 (445)
..+...++|++..+...| .+.+...+.+.+. .+-+-...+..|+.-|+-|...|..+.+-.+-+|
T Consensus 66 S~mtelv~GKtleEA~~i~~~~i~~~L~glpp----~Ri~CA~La~~AL~~Al~~y~~k~~~~~~~~~~~ 131 (153)
T 4eb5_C 66 SMATEMAKGKTIEEALKITRDAVAEALGGLPK----QKMHCSNLAADALRRAIVDYFRKNGKIDKIKELG 131 (153)
T ss_dssp HHHHHHHTTCBHHHHTTCCHHHHHHHHTCCCT----TSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTS
T ss_pred HHHHHHHcCCCHHHHHHhhHHHHHHHhcCCCc----chhHHHHHHHHHHHHHHHHHHHhcCCccHHHHhh
Confidence 446778889877655544 2223323433221 0111123566788889999999888777777776
No 251
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=23.47 E-value=3.6e+02 Score=27.49 Aligned_cols=125 Identities=13% Similarity=0.147 Sum_probs=75.2
Q ss_pred ccCHHHHHHHHHHhhccCCeeeEECCCC--cCCHHHHHHHHHHhC-------CCceEEeCcccccCHHHHHHHHhcCCCC
Q 043137 278 KISGDALKDLYKSFISDYPIVSIEDPFD--QDDWEHYAKLTSEVG-------EKVQIVGDDLLVTNPKRVEKAIKEKTCN 348 (445)
Q Consensus 278 ~~t~~~ai~~~~~~l~~~~i~~iEdP~~--~~D~~~~~~L~~~~~-------~~vpI~gde~~~~~~~~~~~~i~~~a~d 348 (445)
.+|.++-.+. .++.-+.++.||=-.|- ++|+...+++-...+ .+++|++-=......+.+...+ .++|
T Consensus 212 ~lTekD~~D~-l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi--~~sD 288 (526)
T 4drs_A 212 IIGDKDRHDI-VDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSIC--SESD 288 (526)
T ss_dssp SSCHHHHHHH-HHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHH--HHSS
T ss_pred cccchhHHHH-HHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHH--hhcc
Confidence 3455554443 23344678888888884 456666666555432 2477766522111222233343 3689
Q ss_pred EEEeccCCccc-------HHHHHHHHHHHHHcCCcEEecCCCCCChh-------hHHHHHHhhh--cCCcccc
Q 043137 349 ALLLKVNQIGS-------VTESIEAVRMSKQAGWGVMASHRSGETED-------TFIADLSVGL--ATGQIKT 405 (445)
Q Consensus 349 ~v~ik~~~~GG-------it~a~~ia~~A~~~g~~~~~~~~~~et~~-------~~~~~la~a~--~~~~~~~ 405 (445)
.|++.=+-.|- ..--++|++.|+++|.++++..++.||.. +=..|+|-|. ++..+.+
T Consensus 289 gIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavML 361 (526)
T 4drs_A 289 GIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVML 361 (526)
T ss_dssp EEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEE
Confidence 99985443321 23347899999999999999998888643 2345776664 6666665
No 252
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=22.72 E-value=5.7e+02 Score=25.35 Aligned_cols=103 Identities=12% Similarity=0.205 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEeccccccccCCceeeecccCCCCCCCCccCHHHHHHHHHHhhccCCeeeEECC----
Q 043137 228 EGLELLNTAIAKAGYTGKVVIGMDVAASEFYGSDKTYDLNFKEENNDGSQKISGDALKDLYKSFISDYPIVSIEDP---- 303 (445)
Q Consensus 228 ~~l~~l~~av~~~g~~~~i~l~vD~~a~~~~~~~~~y~~~~~~~~~~~~~~~t~~~ai~~~~~~l~~~~i~~iEdP---- 303 (445)
+.++.+.+..++.| +..++|+| |.+|+.+. .+ + ..++.-+.-.
T Consensus 144 ~~l~~l~~~a~~lg----m~~LvEvh--------------------------~~eE~~~A-~~-l-ga~iIGinnr~L~t 190 (452)
T 1pii_A 144 DQYRQLAAVAHSLE----MGVLTEVS--------------------------NEEEQERA-IA-L-GAKVVGINNRDLRD 190 (452)
T ss_dssp HHHHHHHHHHHHTT----CEEEEEEC--------------------------SHHHHHHH-HH-T-TCSEEEEESEETTT
T ss_pred HHHHHHHHHHHHcC----CeEEEEeC--------------------------CHHHHHHH-HH-C-CCCEEEEeCCCCCC
Confidence 44555545555554 67999996 23454322 12 1 2445556532
Q ss_pred CCcCCHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec--cCCcccHHHHHHHH
Q 043137 304 FDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK--VNQIGSVTESIEAV 367 (445)
Q Consensus 304 ~~~~D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik--~~~~GGit~a~~ia 367 (445)
+ .-|++...+|...++..++++.+ +-++++++++++.+. +|.|.+- +++..-++.+++-.
T Consensus 191 ~-~~dl~~~~~L~~~ip~~~~vIaE-sGI~t~edv~~~~~~--a~avLVGealmr~~d~~~~~~~l 252 (452)
T 1pii_A 191 L-SIDLNRTRELAPKLGHNVTVISE-SGINTYAQVRELSHF--ANGFLIGSALMAHDDLHAAVRRV 252 (452)
T ss_dssp T-EECTHHHHHHHHHHCTTSEEEEE-SCCCCHHHHHHHTTT--CSEEEECHHHHTCSCHHHHHHHH
T ss_pred C-CCCHHHHHHHHHhCCCCCeEEEE-CCCCCHHHHHHHHHh--CCEEEEcHHHcCCcCHHHHHHHH
Confidence 2 34788999999998766787665 446789999999876 8999876 45666566655443
No 253
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=22.63 E-value=98 Score=27.57 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhc-----CCCCEEEe
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKE-----KTCNALLL 352 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~-----~a~d~v~i 352 (445)
|++.+++|++.++ +||++.-- +++++++.++++. +.+|.+.+
T Consensus 176 ~~~~i~~l~~~~~--iPvia~GG-I~~~~d~~~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 176 DFSLTKKIAIEAE--VKVLAAGG-ISSENSLKTAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp CHHHHHHHHHHHT--CEEEEESS-CCSHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CHHHHHHHHHhcC--CcEEEECC-CCCHHHHHHHHhcccccCCeEeEEEe
Confidence 7999999999998 99844322 4679999999887 42676664
No 254
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=22.12 E-value=1e+02 Score=26.93 Aligned_cols=42 Identities=10% Similarity=0.290 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
+++.++++++.++ +||+++-- +++++++.++++.+ +|.+.+=
T Consensus 163 ~~~~~~~~~~~~~--ipvia~GG-I~~~~~~~~~~~~G-ad~v~vG 204 (223)
T 1y0e_A 163 DFQFLKDVLQSVD--AKVIAEGN-VITPDMYKRVMDLG-VHCSVVG 204 (223)
T ss_dssp HHHHHHHHHHHCC--SEEEEESS-CCSHHHHHHHHHTT-CSEEEEC
T ss_pred cHHHHHHHHhhCC--CCEEEecC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 4667888888877 99866543 55799999999987 7887763
No 255
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=22.10 E-value=93 Score=27.49 Aligned_cols=42 Identities=5% Similarity=0.105 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEec
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLK 353 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik 353 (445)
.++..+++++.++ +||.+.-. +.+++++..+++.+ +|.|.+-
T Consensus 65 ~~~~i~~i~~~~~--ipvi~~g~-i~~~~~~~~~~~~G-ad~V~i~ 106 (253)
T 1h5y_A 65 FIDSVKRVAEAVS--IPVLVGGG-VRSLEDATTLFRAG-ADKVSVN 106 (253)
T ss_dssp HHHHHHHHHHHCS--SCEEEESS-CCSHHHHHHHHHHT-CSEEEES
T ss_pred cHHHHHHHHHhcC--CCEEEECC-CCCHHHHHHHHHcC-CCEEEEC
Confidence 4556678888877 89855443 46799998888877 8888765
No 256
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=21.85 E-value=4e+02 Score=23.93 Aligned_cols=80 Identities=9% Similarity=0.221 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHhhc---cCCeeeEECCCCcCCHHHHHHHHHHh-CCCceE-EeCcccccCHHHHHHHHhcCCCCEEEecc
Q 043137 280 SGDALKDLYKSFIS---DYPIVSIEDPFDQDDWEHYAKLTSEV-GEKVQI-VGDDLLVTNPKRVEKAIKEKTCNALLLKV 354 (445)
Q Consensus 280 t~~~ai~~~~~~l~---~~~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI-~gde~~~~~~~~~~~~i~~~a~d~v~ik~ 354 (445)
+.+++..+ +.+.+ .+++.|+|-.=...+.+-.+++++.+ . +|+ +|.- ++++++++++.+ .+|.+.+--
T Consensus 143 ~~e~iaa~-A~~a~~~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~--~pv~vGfG--I~~~e~a~~~~~--gAD~VVVGS 215 (235)
T 3w01_A 143 TTEDLEAY-AQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTE--TQLFYGGG--ISSEQQATEMAA--IADTIIVGD 215 (235)
T ss_dssp CHHHHHHH-HHHHHHTTCCSEEEEECTTSCCCHHHHHHHHTTCSS--SEEEEESC--CCSHHHHHHHHT--TSSEEEECT
T ss_pred CHHHHHHH-HHHHHHHcCCCEEEEecCCCcCCHHHHHHHHHhcCC--CCEEEECC--cCCHHHHHHHHc--CCCEEEECC
Confidence 45666554 33222 35799999843345788889999887 5 887 5665 467999998875 589888754
Q ss_pred CCcccHHHHHHH
Q 043137 355 NQIGSVTESIEA 366 (445)
Q Consensus 355 ~~~GGit~a~~i 366 (445)
.-......++++
T Consensus 216 ai~~~~~~~~e~ 227 (235)
T 3w01_A 216 IIYKDIKKALKT 227 (235)
T ss_dssp HHHHCHHHHHHT
T ss_pred ceecCHHHHHHH
Confidence 333333333433
No 257
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=21.73 E-value=2.4e+02 Score=26.44 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=53.4
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+.++++++..+. .+|.-+ +.+.+++.+.++.+ +|+|++|-... .++++++++.+. .+.+.+++... ..
T Consensus 196 ~Av~~ar~~~p~-~kIeVE---v~tl~e~~eAl~aG-aDiImLDn~s~---~~l~~av~~~~~-~v~leaSGGIt---~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKN-EYIAIE---CDNISQVEESLSNN-VDMILLDNMSI---SEIKKAVDIVNG-KSVLEVSGCVN---IR 263 (300)
T ss_dssp HHHHHHHHHSSS-CCEEEE---ESSHHHHHHHHHTT-CSEEEEESCCH---HHHHHHHHHHTT-SSEEEEESSCC---TT
T ss_pred HHHHHHHHhCCC-CCEEEE---ECCHHHHHHHHHcC-CCEEEECCCCH---HHHHHHHHhhcC-ceEEEEECCCC---HH
Confidence 456667766542 565332 45689999999887 79999998654 555555555443 45555554322 22
Q ss_pred HHHHHHhhhcCCccccCCCC
Q 043137 390 FIADLSVGLATGQIKTGAPC 409 (445)
Q Consensus 390 ~~~~la~a~~~~~~~~G~~~ 409 (445)
.+..+|- .+..++..|.+.
T Consensus 264 ~i~~~A~-tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIAL-TGVDYISIGCIT 282 (300)
T ss_dssp THHHHHT-TTCSEEECGGGT
T ss_pred HHHHHHH-cCCCEEEeCccc
Confidence 2344443 467777777654
No 258
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=21.63 E-value=48 Score=32.89 Aligned_cols=45 Identities=7% Similarity=0.039 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||+|.-- +.+.+|+.+++..+ +|.|++--.
T Consensus 332 l~~I~~v~~~v~~~iPIIg~GG-I~s~eDa~e~l~aG-Ad~VqIgra 376 (415)
T 3i65_A 332 TKFICEMYNYTNKQIPIIASGG-IFSGLDALEKIEAG-ASVCQLYSC 376 (415)
T ss_dssp HHHHHHHHHHTTTCSCEEECSS-CCSHHHHHHHHHHT-EEEEEESHH
T ss_pred HHHHHHHHHHhCCCCCEEEECC-CCCHHHHHHHHHcC-CCEEEEcHH
Confidence 3567888888854599977765 57799999999987 599997654
No 259
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=21.43 E-value=51 Score=31.79 Aligned_cols=58 Identities=9% Similarity=0.033 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC-CcccHHHHHHHHH
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN-QIGSVTESIEAVR 368 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~-~~GGit~a~~ia~ 368 (445)
++..+++++.++.++||+|.-- +.+.+|+.+++..+ +|.|++=-. -..|..-..++.+
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GG-I~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~~ 320 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGG-VXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRITK 320 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESS-CCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHHH
Confidence 5667788888744599966654 56799999999877 799998755 3445554444443
No 260
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.37 E-value=2.1e+02 Score=26.77 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=43.8
Q ss_pred HHHHHhcCCCCEEEeccCCcc-----cHHHHHHHHHHHHHcCCcEEecCCCC-----CCh-hhHHHHHHhhhcCCccccC
Q 043137 338 VEKAIKEKTCNALLLKVNQIG-----SVTESIEAVRMSKQAGWGVMASHRSG-----ETE-DTFIADLSVGLATGQIKTG 406 (445)
Q Consensus 338 ~~~~i~~~a~d~v~ik~~~~G-----Git~a~~ia~~A~~~g~~~~~~~~~~-----et~-~~~~~~la~a~~~~~~~~G 406 (445)
+++.++. .+|.|.+.+.--. .+.++.++.+.|+.+|+++++-...+ +.. ....+++|..+++.++|..
T Consensus 131 ve~Av~~-GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRL-NSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHT-TCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHC-CCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 3444443 4567766554211 35566788888999999987732111 112 2357788888899999987
Q ss_pred CC
Q 043137 407 AP 408 (445)
Q Consensus 407 ~~ 408 (445)
.+
T Consensus 210 ~t 211 (295)
T 3glc_A 210 YV 211 (295)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 261
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=21.25 E-value=97 Score=30.95 Aligned_cols=45 Identities=7% Similarity=0.039 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 309 WEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 309 ~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
++..+++++.++.++||+|.-- +.+.+++.+.+..+ +|.|++--.
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GG-I~s~~DA~e~l~aG-Ad~Vqigra 404 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGG-IFSGLDALEKIEAG-ASVCQLYSC 404 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESS-CCSHHHHHHHHHTT-EEEEEESHH
T ss_pred HHHHHHHHHHcCCCCcEEEECC-CCCHHHHHHHHHcC-CCEEEEcHH
Confidence 4567788888844499866554 56799999999988 899998654
No 262
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=20.90 E-value=1.9e+02 Score=30.76 Aligned_cols=92 Identities=16% Similarity=0.166 Sum_probs=60.7
Q ss_pred HHHHHHHhcCCCCEEEe---ccCCc---ccHHH-------------HHHHHHHHHHcCCcEEecCCCCCC------hhhH
Q 043137 336 KRVEKAIKEKTCNALLL---KVNQI---GSVTE-------------SIEAVRMSKQAGWGVMASHRSGET------EDTF 390 (445)
Q Consensus 336 ~~~~~~i~~~a~d~v~i---k~~~~---GGit~-------------a~~ia~~A~~~g~~~~~~~~~~et------~~~~ 390 (445)
..+.++..+...+++.+ |..+- |.-.. +.+++++|++.|+.+++.|....+ ....
T Consensus 374 K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~e~~~d~ 453 (738)
T 2d73_A 374 KRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDK 453 (738)
T ss_dssp HHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhHHHHHHH
Confidence 33444566788999999 88775 32233 789999999999999998854441 1222
Q ss_pred HHHHHhhhcCCccccCCC----CCch------hHHHHHHHHHHHHHh
Q 043137 391 IADLSVGLATGQIKTGAP----CRSE------RLAKYNQLLRIEEEL 427 (445)
Q Consensus 391 ~~~la~a~~~~~~~~G~~----~~~e------~~~k~n~ll~i~~~l 427 (445)
...+-...|..-+|.|-. .+.+ .+..|-++++-+.+-
T Consensus 454 ~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~ 500 (738)
T 2d73_A 454 AYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADY 500 (738)
T ss_dssp HHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHc
Confidence 334444457778887776 2443 666676677666543
No 263
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=20.88 E-value=1e+02 Score=27.17 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcE
Q 043137 308 DWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGV 377 (445)
Q Consensus 308 D~~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~ 377 (445)
+++.++++++.++ +||+++-- +++++++.++++.+ +|.+.+=-.-..+-....++.++.+++|+.+
T Consensus 186 ~~~~i~~l~~~~~--~pvia~GG-i~~~~~~~~~~~~G-a~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 186 DVELIRRVADSVR--IPVIASGG-AGRVEHFYEAAAAG-ADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp CHHHHHHHHHHCS--SCEEEESC-CCSHHHHHHHHHTT-CSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred CHHHHHHHHHhcC--CCEEEeCC-CCCHHHHHHHHHcC-CcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 7888999998876 88854432 45689999998755 5666543211111112345555567777763
No 264
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=20.87 E-value=2.2e+02 Score=26.93 Aligned_cols=99 Identities=12% Similarity=-0.031 Sum_probs=53.6
Q ss_pred HHHHHHHHh-hccCCeeeEECCCCcCCHHHHHHHHHH-hC-CCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCccc
Q 043137 283 ALKDLYKSF-ISDYPIVSIEDPFDQDDWEHYAKLTSE-VG-EKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGS 359 (445)
Q Consensus 283 ~ai~~~~~~-l~~~~i~~iEdP~~~~D~~~~~~L~~~-~~-~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GG 359 (445)
+++...... +.+-+-.++++|-...-......+... .. ..+++--++....+++++++.++.....+|.+-....|.
T Consensus 98 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~G~ 177 (417)
T 3n0l_A 98 QANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAYAR 177 (417)
T ss_dssp HHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSCCS
T ss_pred HHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCcccCc
Confidence 444443333 344457788888654221211122111 11 012332223222468999998875455666665545688
Q ss_pred HHHHHHHHHHHHHcCCcEEecC
Q 043137 360 VTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 360 it~a~~ia~~A~~~g~~~~~~~ 381 (445)
+.+..+++++|+++|+.+++..
T Consensus 178 ~~~l~~i~~l~~~~~~~li~De 199 (417)
T 3n0l_A 178 VIDFAKFREIADEIGAYLFADI 199 (417)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEC
T ss_pred cCCHHHHHHHHHHcCCEEEEEC
Confidence 8889999999999999987654
No 265
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=20.60 E-value=1.2e+02 Score=28.79 Aligned_cols=47 Identities=6% Similarity=-0.043 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCC
Q 043137 335 PKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRS 383 (445)
Q Consensus 335 ~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~ 383 (445)
.+-+..+++. ..+++.=|+.-. .+.++.++++.|++.|+.++++++.
T Consensus 108 ~~~a~~al~a-GkhVl~EKPla~-~~~ea~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 108 AEMAIAALEA-GKHVWCEKPMAP-AYADAERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp HHHHHHHHHT-TCEEEECSCSCS-SHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred HHHHHHHHhc-CCeEEEccCCcc-cHHHHHHhhhhHHhcCCcccccccc
Confidence 4555566655 457777777654 7999999999999999999999953
No 266
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=20.42 E-value=3.8e+02 Score=24.00 Aligned_cols=66 Identities=12% Similarity=0.253 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHhhcc-C--CeeeEECCCCcCCHHHHHHHHHHh-CCCceE-EeCcccccCHHHHHHHHhcCCCCEEEe
Q 043137 280 SGDALKDLYKSFISD-Y--PIVSIEDPFDQDDWEHYAKLTSEV-GEKVQI-VGDDLLVTNPKRVEKAIKEKTCNALLL 352 (445)
Q Consensus 280 t~~~ai~~~~~~l~~-~--~i~~iEdP~~~~D~~~~~~L~~~~-~~~vpI-~gde~~~~~~~~~~~~i~~~a~d~v~i 352 (445)
+++.+. .+.+.-++ + ++.|++--=...+.+-.+++++.+ . +|+ +|.- ++++++++++++ .+|.+.+
T Consensus 147 ~~e~~~-~~a~~g~~~l~~~~Vyl~~~G~~~~~~~i~~i~~~~~~--~Pv~vGgG--I~s~e~a~~~~~--gAd~VIV 217 (234)
T 2f6u_A 147 DKELAA-SYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKKVLDK--ARLFYGGG--IDSREKAREMLR--YADTIIV 217 (234)
T ss_dssp CHHHHH-HHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHHHCSS--SEEEEESC--CCSHHHHHHHHH--HSSEEEE
T ss_pred CHHHHH-HHHHhhhhhcCCCEEEEeCCCCcchHHHHHHHHHhCCC--CCEEEEec--CCCHHHHHHHHh--CCCEEEE
Confidence 343333 34544443 3 788888621245788889999998 6 887 6664 467999999887 4777765
No 267
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=20.31 E-value=3.7e+02 Score=25.16 Aligned_cols=99 Identities=12% Similarity=0.082 Sum_probs=61.7
Q ss_pred HHHHHHHHHhh-----ccCCeeeEECCCCcCCHHHHHHHHHHhCCC-ceEEeCcccccCHHHHHHHHhcCCCCEEEeccC
Q 043137 282 DALKDLYKSFI-----SDYPIVSIEDPFDQDDWEHYAKLTSEVGEK-VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 355 (445)
Q Consensus 282 ~~ai~~~~~~l-----~~~~i~~iEdP~~~~D~~~~~~L~~~~~~~-vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~ 355 (445)
.+++......+ .+-+-..+.+|..+.....|..+.+..+-+ +.+--++...-+++++++.++.+ ..+|.+...
T Consensus 100 t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~ 178 (420)
T 1t3i_A 100 TEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK-TKLVTVVHI 178 (420)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT-EEEEEEESB
T ss_pred HHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCC-ceEEEEeCC
Confidence 45555444443 334467788998877655666666655521 12222222223688888887653 345544432
Q ss_pred --CcccHHHHHHHHHHHHHcCCcEEecC
Q 043137 356 --QIGSVTESIEAVRMSKQAGWGVMASH 381 (445)
Q Consensus 356 --~~GGit~a~~ia~~A~~~g~~~~~~~ 381 (445)
-.|.+....+++++|+++|+.+++..
T Consensus 179 ~nptG~~~~l~~i~~l~~~~~~~li~D~ 206 (420)
T 1t3i_A 179 SNTLGCVNPAEEIAQLAHQAGAKVLVDA 206 (420)
T ss_dssp CTTTCBBCCHHHHHHHHHHTTCEEEEEC
T ss_pred cccccCcCCHHHHHHHHHHcCCEEEEEh
Confidence 25777888999999999999987755
No 268
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=20.26 E-value=3.3e+02 Score=25.79 Aligned_cols=85 Identities=13% Similarity=0.091 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCCCceEEeCcccccCHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcCCcEEecCCCCCChhh
Q 043137 310 EHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDT 389 (445)
Q Consensus 310 ~~~~~L~~~~~~~vpI~gde~~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g~~~~~~~~~~et~~~ 389 (445)
+.++++++..+. .+|.- | +.+.+++++.++.+ +|+|++|-.. +.+.+++++..+ ..+.+.+++. ....
T Consensus 220 ~Av~~ar~~~p~-~kIeV-E--Vdtldea~eAl~aG-aD~I~LDn~~---~~~l~~av~~l~-~~v~ieaSGG---It~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPG-KPVEV-E--TETLAELEEAISAG-ADIIMLDNFS---LEMMREAVKINA-GRAALENSGN---ITLD 287 (320)
T ss_dssp HHHHHHHHHSTT-SCEEE-E--ESSHHHHHHHHHTT-CSEEEEESCC---HHHHHHHHHHHT-TSSEEEEESS---CCHH
T ss_pred HHHHHHHHhCCC-CeEEE-E--ECCHHHHHHHHHcC-CCEEEECCCC---HHHHHHHHHHhC-CCCeEEEECC---CCHH
Confidence 566777777654 35532 2 45688888888876 6999999864 455555555543 3466655443 2334
Q ss_pred HHHHHHhhhcCCccccCC
Q 043137 390 FIADLSVGLATGQIKTGA 407 (445)
Q Consensus 390 ~~~~la~a~~~~~~~~G~ 407 (445)
.+..++- .++.++..|.
T Consensus 288 ~I~~~a~-tGVD~isvGa 304 (320)
T 3paj_A 288 NLKECAE-TGVDYISVGA 304 (320)
T ss_dssp HHHHHHT-TTCSEEECTH
T ss_pred HHHHHHH-cCCCEEEECc
Confidence 4555554 4677777765
No 269
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.12 E-value=1.8e+02 Score=24.29 Aligned_cols=49 Identities=10% Similarity=0.109 Sum_probs=41.1
Q ss_pred CHHHHHHHHhcCCCCEEEeccCCcccHHHHHHHHHHHHHcC---CcEEecCC
Q 043137 334 NPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAG---WGVMASHR 382 (445)
Q Consensus 334 ~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~ia~~A~~~g---~~~~~~~~ 382 (445)
.++++.+.+....+|+|-+.......+..+.++++..++.| +++++|+.
T Consensus 57 p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 57 TPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 37888888888889999998887788999999999888875 67888874
Done!